Query 010286
Match_columns 513
No_of_seqs 469 out of 2486
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 03:29:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010286.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010286hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qcp_A QSOX from trypanosoma b 100.0 1.8E-77 6.3E-82 632.0 18.9 382 44-456 21-429 (470)
2 3t58_A Sulfhydryl oxidase 1; o 100.0 8.7E-76 3E-80 633.3 27.1 372 43-448 9-514 (519)
3 3llk_A Sulfhydryl oxidase 1; d 100.0 1.3E-63 4.4E-68 484.4 14.3 223 205-448 17-256 (261)
4 1jr8_A ERV2 protein, mitochond 99.9 2E-26 6.9E-31 198.5 7.0 78 310-387 9-92 (117)
5 2hj3_A Sulfhydryl oxidase ERV1 99.9 2.6E-26 8.9E-31 200.0 7.0 96 307-411 8-109 (125)
6 3gwn_A Probable FAD-linked sul 99.9 7.1E-24 2.4E-28 182.1 8.7 74 314-387 11-95 (114)
7 3gwl_A P14, FAD-linked sulfhyd 99.9 5.3E-23 1.8E-27 174.2 8.5 72 315-387 10-88 (106)
8 4e0h_A Mitochondrial FAD-linke 99.9 6.5E-22 2.2E-26 168.0 7.8 73 315-387 10-88 (106)
9 3zzx_A Thioredoxin; oxidoreduc 99.8 1.5E-20 5.2E-25 159.8 11.9 98 52-173 7-104 (105)
10 3h79_A Thioredoxin-like protei 99.8 6.5E-20 2.2E-24 160.2 14.8 115 43-173 12-126 (127)
11 3u5s_A FAD-linked sulfhydryl o 99.8 7.5E-21 2.6E-25 165.9 7.8 73 315-387 26-104 (126)
12 3ga4_A Dolichyl-diphosphooligo 99.8 2.7E-19 9.1E-24 165.7 14.9 132 45-181 17-159 (178)
13 4e0i_A Mitochondrial FAD-linke 99.8 1.2E-19 3.9E-24 168.5 7.5 76 312-387 90-171 (189)
14 3gnj_A Thioredoxin domain prot 99.8 2.2E-18 7.6E-23 145.8 12.1 107 46-175 4-110 (111)
15 2qsi_A Putative hydrogenase ex 99.8 1.2E-18 4E-23 154.2 10.6 106 46-174 15-122 (137)
16 3uvt_A Thioredoxin domain-cont 99.8 3.4E-18 1.2E-22 144.5 12.1 107 45-173 4-110 (111)
17 2av4_A Thioredoxin-like protei 99.8 1.3E-18 4.5E-23 156.5 9.6 113 48-175 23-139 (160)
18 2trx_A Thioredoxin; electron t 99.8 4.1E-18 1.4E-22 143.6 12.2 106 46-174 2-107 (108)
19 2voc_A Thioredoxin; electron t 99.8 3.3E-18 1.1E-22 145.9 10.7 106 47-177 2-107 (112)
20 3tco_A Thioredoxin (TRXA-1); d 99.8 6.6E-18 2.2E-22 142.1 12.4 106 45-174 3-108 (109)
21 3qfa_C Thioredoxin; protein-pr 99.8 2.3E-18 8E-23 148.2 9.8 106 45-174 11-116 (116)
22 3die_A Thioredoxin, TRX; elect 99.7 5.9E-18 2E-22 141.8 11.8 104 46-174 3-106 (106)
23 3ed3_A Protein disulfide-isome 99.7 4E-18 1.4E-22 171.4 12.6 129 42-178 13-145 (298)
24 2dj1_A Protein disulfide-isome 99.7 7.9E-18 2.7E-22 148.9 12.7 113 44-178 15-127 (140)
25 2qgv_A Hydrogenase-1 operon pr 99.7 1.6E-18 5.4E-23 153.9 8.0 105 47-175 18-125 (140)
26 2dml_A Protein disulfide-isome 99.7 9.1E-18 3.1E-22 146.6 12.2 111 43-175 14-124 (130)
27 2pu9_C TRX-F, thioredoxin F-ty 99.7 1E-17 3.5E-22 142.3 12.1 107 45-174 4-110 (111)
28 1mek_A Protein disulfide isome 99.7 2.7E-18 9.1E-23 146.9 8.3 116 43-177 4-119 (120)
29 3p2a_A Thioredoxin 2, putative 99.7 1.2E-17 4.2E-22 149.6 13.0 110 43-176 35-144 (148)
30 3q6o_A Sulfhydryl oxidase 1; p 99.7 1.2E-17 4.2E-22 162.5 14.0 121 43-177 9-129 (244)
31 2i4a_A Thioredoxin; acidophIle 99.7 1.6E-17 5.5E-22 139.4 12.4 105 46-173 2-106 (107)
32 2ppt_A Thioredoxin-2; thiredox 99.7 1.1E-17 3.8E-22 151.9 12.2 109 44-176 45-153 (155)
33 1x5d_A Protein disulfide-isome 99.7 1.2E-17 4.1E-22 146.1 11.5 114 44-176 5-118 (133)
34 3hxs_A Thioredoxin, TRXP; elec 99.7 1.3E-17 4.3E-22 147.9 11.6 111 43-175 19-139 (141)
35 1w4v_A Thioredoxin, mitochondr 99.7 1.6E-17 5.3E-22 143.4 11.8 109 44-175 11-119 (119)
36 1thx_A Thioredoxin, thioredoxi 99.7 2.1E-17 7E-22 140.6 12.3 108 45-175 6-113 (115)
37 1nsw_A Thioredoxin, TRX; therm 99.7 1.3E-17 4.3E-22 139.8 10.6 103 48-174 2-104 (105)
38 3hz4_A Thioredoxin; NYSGXRC, P 99.7 1E-17 3.4E-22 149.1 10.6 109 45-176 5-113 (140)
39 3qou_A Protein YBBN; thioredox 99.7 1.1E-17 3.8E-22 166.4 12.0 109 45-175 6-114 (287)
40 1gh2_A Thioredoxin-like protei 99.7 2.2E-17 7.7E-22 139.2 12.2 104 48-175 3-107 (107)
41 1t00_A Thioredoxin, TRX; redox 99.7 2.1E-17 7E-22 140.3 11.9 106 47-175 6-111 (112)
42 2yzu_A Thioredoxin; redox prot 99.7 2.6E-17 8.8E-22 138.3 12.0 106 47-176 2-107 (109)
43 3aps_A DNAJ homolog subfamily 99.7 1.8E-17 6.3E-22 143.0 11.3 108 45-175 2-113 (122)
44 1dby_A Chloroplast thioredoxin 99.7 2E-17 6.9E-22 139.1 11.3 105 47-174 2-106 (107)
45 1x5e_A Thioredoxin domain cont 99.7 2.3E-17 7.8E-22 143.5 11.9 108 44-177 5-112 (126)
46 2o8v_B Thioredoxin 1; disulfid 99.7 1.3E-17 4.4E-22 146.3 10.3 107 45-174 21-127 (128)
47 2e0q_A Thioredoxin; electron t 99.7 3.8E-17 1.3E-21 135.8 12.0 103 48-175 1-103 (104)
48 2l5l_A Thioredoxin; structural 99.7 4.7E-17 1.6E-21 143.9 12.7 110 45-177 8-128 (136)
49 1fb6_A Thioredoxin M; electron 99.7 4.6E-17 1.6E-21 136.1 12.0 104 48-174 2-105 (105)
50 2b5e_A Protein disulfide-isome 99.7 4.3E-17 1.5E-21 175.3 14.6 116 42-178 10-125 (504)
51 1faa_A Thioredoxin F; electron 99.7 4.4E-17 1.5E-21 141.2 11.9 107 45-174 17-123 (124)
52 2r2j_A Thioredoxin domain-cont 99.7 2.8E-17 9.7E-22 170.8 12.7 115 46-178 5-120 (382)
53 1xwb_A Thioredoxin; dimerizati 99.7 4.9E-17 1.7E-21 136.1 11.5 104 48-174 2-106 (106)
54 3d6i_A Monothiol glutaredoxin- 99.7 3E-17 1E-21 139.4 10.3 106 48-175 2-109 (112)
55 3m9j_A Thioredoxin; oxidoreduc 99.7 5.9E-17 2E-21 135.6 11.2 99 52-174 7-105 (105)
56 1ep7_A Thioredoxin CH1, H-type 99.7 3.6E-17 1.2E-21 138.7 9.9 106 47-175 3-111 (112)
57 2i1u_A Thioredoxin, TRX, MPT46 99.7 4.3E-17 1.5E-21 140.2 10.5 109 44-175 10-118 (121)
58 3us3_A Calsequestrin-1; calciu 99.7 6.2E-17 2.1E-21 167.4 13.0 112 43-178 10-127 (367)
59 2vlu_A Thioredoxin, thioredoxi 99.7 7.5E-17 2.6E-21 139.2 11.4 108 45-176 12-121 (122)
60 2xc2_A Thioredoxinn; oxidoredu 99.7 5.9E-17 2E-21 139.0 10.7 103 47-174 14-117 (117)
61 3gix_A Thioredoxin-like protei 99.7 5.2E-17 1.8E-21 146.5 10.7 112 50-174 8-120 (149)
62 1r26_A Thioredoxin; redox-acti 99.7 7.7E-17 2.6E-21 140.9 11.3 105 45-175 18-123 (125)
63 2dj0_A Thioredoxin-related tra 99.7 6.3E-18 2.2E-22 149.6 4.4 88 45-140 6-99 (137)
64 3f3q_A Thioredoxin-1; His TAG, 99.7 1.2E-16 4.2E-21 135.7 12.0 102 47-174 8-109 (109)
65 2djj_A PDI, protein disulfide- 99.7 3.1E-17 1.1E-21 141.2 8.4 114 44-176 5-118 (121)
66 4euy_A Uncharacterized protein 99.7 1.5E-17 5.1E-22 140.1 6.1 98 52-174 7-104 (105)
67 3apq_A DNAJ homolog subfamily 99.7 1.1E-16 3.9E-21 152.2 12.7 111 44-178 95-205 (210)
68 2dj3_A Protein disulfide-isome 99.7 2.2E-17 7.6E-22 144.7 7.2 115 44-177 5-120 (133)
69 1xfl_A Thioredoxin H1; AT3G510 99.7 1.6E-16 5.6E-21 138.4 12.3 109 42-174 12-123 (124)
70 2vim_A Thioredoxin, TRX; thior 99.7 1.9E-16 6.4E-21 132.1 12.0 102 49-174 2-104 (104)
71 1oaz_A Thioredoxin 1; immune s 99.7 1.9E-17 6.5E-22 144.3 5.7 106 46-174 3-122 (123)
72 3idv_A Protein disulfide-isome 99.7 1.5E-16 5E-21 153.5 12.3 111 44-176 13-123 (241)
73 3dxb_A Thioredoxin N-terminall 99.7 1.2E-16 4.2E-21 153.4 11.3 112 43-177 9-120 (222)
74 3f8u_A Protein disulfide-isome 99.7 1.1E-16 3.7E-21 171.0 11.9 110 47-178 2-112 (481)
75 3emx_A Thioredoxin; structural 99.7 7.6E-17 2.6E-21 142.6 8.7 106 45-176 15-127 (135)
76 1sji_A Calsequestrin 2, calseq 99.7 1E-16 3.4E-21 164.5 10.9 110 44-178 9-125 (350)
77 1syr_A Thioredoxin; SGPP, stru 99.7 2.2E-16 7.6E-21 134.4 11.2 104 45-174 8-111 (112)
78 3cxg_A Putative thioredoxin; m 99.7 1.1E-16 3.7E-21 141.4 9.5 109 45-176 19-130 (133)
79 2wz9_A Glutaredoxin-3; protein 99.7 2.7E-16 9.3E-21 142.0 11.9 108 46-177 12-120 (153)
80 1v98_A Thioredoxin; oxidoreduc 99.7 2.3E-16 7.9E-21 139.9 11.0 106 46-175 33-138 (140)
81 3ul3_B Thioredoxin, thioredoxi 99.7 1.1E-16 3.9E-21 139.8 8.8 86 65-172 42-127 (128)
82 3idv_A Protein disulfide-isome 99.7 5.3E-16 1.8E-20 149.6 13.1 112 44-177 128-239 (241)
83 1zma_A Bacterocin transport ac 99.7 2.7E-16 9.3E-21 135.2 9.8 104 46-171 12-117 (118)
84 2l6c_A Thioredoxin; oxidoreduc 99.7 2.8E-16 9.5E-21 133.7 9.3 103 48-176 5-107 (110)
85 1qgv_A Spliceosomal protein U5 99.6 3E-16 1E-20 140.3 9.8 111 52-175 10-121 (142)
86 2oe3_A Thioredoxin-3; electron 99.6 5.2E-16 1.8E-20 133.1 10.8 102 45-172 11-113 (114)
87 3evi_A Phosducin-like protein 99.6 4.5E-16 1.5E-20 134.9 10.1 106 47-172 4-111 (118)
88 2l57_A Uncharacterized protein 99.6 4.7E-16 1.6E-20 135.1 9.3 109 48-176 6-118 (126)
89 3td7_A FAD-linked sulfhydryl o 99.6 2.3E-16 7.7E-21 152.2 7.8 74 315-388 46-130 (295)
90 2c0g_A ERP29 homolog, windbeut 99.6 1.4E-15 4.7E-20 148.5 13.3 114 42-177 12-134 (248)
91 3d22_A TRXH4, thioredoxin H-ty 99.6 8.1E-16 2.8E-20 136.0 10.5 108 45-176 23-133 (139)
92 2vm1_A Thioredoxin, thioredoxi 99.6 9.5E-16 3.2E-20 130.9 10.6 107 46-176 6-115 (118)
93 2es7_A Q8ZP25_salty, putative 99.6 4.5E-16 1.5E-20 139.4 8.6 107 47-178 18-128 (142)
94 1ti3_A Thioredoxin H, PTTRXH1; 99.6 1.1E-15 3.8E-20 129.5 10.4 105 47-175 5-112 (113)
95 2dbc_A PDCL2, unnamed protein 99.6 1.8E-15 6.3E-20 133.8 11.7 104 45-174 9-120 (135)
96 3uem_A Protein disulfide-isome 99.6 1.1E-15 3.7E-20 157.1 11.7 111 44-175 247-357 (361)
97 2kuc_A Putative disulphide-iso 99.6 8.3E-16 2.8E-20 134.1 8.9 109 48-176 8-122 (130)
98 2j23_A Thioredoxin; immune pro 99.6 9.6E-16 3.3E-20 132.6 8.9 104 47-174 16-120 (121)
99 2fwh_A Thiol:disulfide interch 99.6 2.6E-15 8.9E-20 132.3 11.3 107 50-175 16-128 (134)
100 2f51_A Thioredoxin; electron t 99.6 2.1E-15 7.1E-20 130.1 9.9 109 47-176 4-114 (118)
101 3f8u_A Protein disulfide-isome 99.6 3E-15 1E-19 159.8 12.9 128 34-181 339-467 (481)
102 2yj7_A LPBCA thioredoxin; oxid 99.4 1.2E-16 4.1E-21 133.2 0.0 103 48-173 3-105 (106)
103 2qc7_A ERP31, ERP28, endoplasm 99.6 8.3E-15 2.8E-19 142.4 12.9 108 45-174 4-118 (240)
104 3apo_A DNAJ homolog subfamily 99.6 1.9E-15 6.5E-20 170.9 8.9 112 43-178 113-224 (780)
105 1a8l_A Protein disulfide oxido 99.6 1.1E-14 3.9E-19 139.2 11.3 108 48-174 118-225 (226)
106 2b5e_A Protein disulfide-isome 99.5 1.3E-14 4.5E-19 155.8 11.5 113 45-177 357-469 (504)
107 1wou_A Thioredoxin -related pr 99.5 1.2E-14 4.2E-19 126.1 8.8 105 47-172 6-122 (123)
108 3fk8_A Disulphide isomerase; A 99.5 1.4E-14 4.7E-19 127.0 8.3 100 54-173 16-131 (133)
109 1wmj_A Thioredoxin H-type; str 99.5 2.6E-15 8.8E-20 130.6 3.1 108 45-176 13-123 (130)
110 2trc_P Phosducin, MEKA, PP33; 99.5 6.7E-15 2.3E-19 141.1 6.3 104 46-173 99-211 (217)
111 1a0r_P Phosducin, MEKA, PP33; 99.5 2.3E-14 7.9E-19 139.6 8.5 110 46-173 112-224 (245)
112 1fo5_A Thioredoxin; disulfide 99.5 3.9E-14 1.3E-18 113.6 6.6 83 66-174 3-85 (85)
113 2lst_A Thioredoxin; structural 99.2 3.3E-15 1.1E-19 130.4 0.0 94 65-176 19-117 (130)
114 2ywm_A Glutaredoxin-like prote 99.5 1.8E-13 6.3E-18 131.2 11.0 102 47-175 119-220 (229)
115 1nho_A Probable thioredoxin; b 99.5 4.9E-14 1.7E-18 113.0 5.9 81 68-174 4-84 (85)
116 3f9u_A Putative exported cytoc 99.5 6.9E-14 2.3E-18 128.3 7.3 106 48-175 28-166 (172)
117 3kp8_A Vkorc1/thioredoxin doma 99.4 1.8E-14 6E-19 122.4 2.6 75 66-171 13-91 (106)
118 2ju5_A Thioredoxin disulfide i 99.4 2.8E-13 9.4E-18 122.4 10.7 101 54-175 34-152 (154)
119 3dml_A Putative uncharacterize 99.4 2.7E-14 9.3E-19 122.8 2.9 93 65-175 18-110 (116)
120 2djk_A PDI, protein disulfide- 99.4 2.8E-13 9.7E-18 119.3 8.5 105 47-177 7-117 (133)
121 3apo_A DNAJ homolog subfamily 99.4 5.4E-13 1.8E-17 150.7 13.0 114 46-177 543-658 (780)
122 2b5x_A YKUV protein, TRXY; thi 99.4 1E-12 3.5E-17 115.9 11.6 105 49-175 15-145 (148)
123 3iv4_A Putative oxidoreductase 99.4 4.3E-13 1.5E-17 114.1 8.6 98 48-170 8-111 (112)
124 2hls_A Protein disulfide oxido 99.4 1.1E-12 3.7E-17 127.8 12.2 105 51-178 125-229 (243)
125 2ywm_A Glutaredoxin-like prote 99.4 5.5E-13 1.9E-17 127.9 9.1 101 54-175 9-115 (229)
126 1zzo_A RV1677; thioredoxin fol 99.4 8.9E-13 3.1E-17 114.4 9.6 105 47-175 9-135 (136)
127 1a8l_A Protein disulfide oxido 99.4 6.3E-13 2.2E-17 127.0 9.3 103 53-175 9-113 (226)
128 1lu4_A Soluble secreted antige 99.4 9E-13 3.1E-17 114.7 9.2 89 64-174 23-135 (136)
129 3erw_A Sporulation thiol-disul 99.4 6.5E-13 2.2E-17 116.8 8.0 88 64-170 33-144 (145)
130 3raz_A Thioredoxin-related pro 99.4 3.1E-12 1.1E-16 114.3 11.5 96 61-175 20-140 (151)
131 2f9s_A Thiol-disulfide oxidore 99.4 1.6E-12 5.6E-17 115.9 9.6 94 64-176 25-139 (151)
132 1ilo_A Conserved hypothetical 99.3 1.7E-12 5.8E-17 102.2 7.9 74 68-170 2-76 (77)
133 2h30_A Thioredoxin, peptide me 99.3 1.5E-12 5.1E-17 117.5 8.4 108 47-175 22-156 (164)
134 3or5_A Thiol:disulfide interch 99.3 3.8E-12 1.3E-16 114.8 11.0 107 47-176 18-152 (165)
135 1sen_A Thioredoxin-like protei 99.3 4.8E-13 1.6E-17 122.3 4.9 108 54-175 37-148 (164)
136 3lor_A Thiol-disulfide isomera 99.3 5.3E-12 1.8E-16 113.4 10.3 93 64-175 29-155 (160)
137 2lja_A Putative thiol-disulfid 99.3 4.9E-12 1.7E-16 112.6 9.6 108 48-176 15-144 (152)
138 3fkf_A Thiol-disulfide oxidore 99.3 4E-12 1.4E-16 112.3 8.8 90 64-175 32-146 (148)
139 4evm_A Thioredoxin family prot 99.3 4.5E-12 1.6E-16 109.7 9.1 89 64-172 21-136 (138)
140 1z6n_A Hypothetical protein PA 99.3 3.7E-12 1.3E-16 116.9 8.5 79 49-138 39-120 (167)
141 3eyt_A Uncharacterized protein 99.3 9E-12 3.1E-16 111.7 10.8 93 64-175 27-152 (158)
142 3ph9_A Anterior gradient prote 99.3 3.6E-12 1.2E-16 115.1 6.4 67 65-141 44-114 (151)
143 3hcz_A Possible thiol-disulfid 99.3 5.6E-12 1.9E-16 111.3 7.4 104 48-174 16-145 (148)
144 2lrn_A Thiol:disulfide interch 99.3 1.4E-11 4.6E-16 110.2 9.8 91 64-176 28-142 (152)
145 2l5o_A Putative thioredoxin; s 99.3 7.6E-12 2.6E-16 111.5 8.2 93 65-176 28-142 (153)
146 1i5g_A Tryparedoxin II; electr 99.2 2.4E-11 8.1E-16 107.5 9.7 88 47-141 12-123 (144)
147 3ewl_A Uncharacterized conserv 99.2 1.6E-11 5.3E-16 108.1 8.0 93 60-174 22-140 (142)
148 3uem_A Protein disulfide-isome 99.2 3.9E-11 1.3E-15 122.9 11.7 112 45-177 116-232 (361)
149 3ia1_A THIO-disulfide isomeras 99.2 2.6E-11 8.9E-16 108.2 8.9 93 61-176 27-145 (154)
150 3ira_A Conserved protein; meth 99.2 1.2E-11 4.2E-16 114.0 6.4 81 50-141 26-118 (173)
151 1o8x_A Tryparedoxin, TRYX, TXN 99.2 4.8E-11 1.6E-15 105.8 10.1 76 61-141 24-123 (146)
152 3gl3_A Putative thiol:disulfid 99.2 6.2E-11 2.1E-15 105.4 10.7 96 63-177 26-144 (152)
153 3kp9_A Vkorc1/thioredoxin doma 99.2 2.7E-11 9.3E-16 120.5 7.8 85 53-172 189-277 (291)
154 3eur_A Uncharacterized protein 99.2 4.3E-11 1.5E-15 105.6 8.3 101 48-172 16-142 (142)
155 1o73_A Tryparedoxin; electron 99.2 6.7E-11 2.3E-15 104.3 9.3 75 62-141 25-123 (144)
156 3s9f_A Tryparedoxin; thioredox 99.2 7.5E-11 2.6E-15 107.5 9.7 74 63-141 46-143 (165)
157 3hdc_A Thioredoxin family prot 99.2 7.1E-11 2.4E-15 106.2 9.1 106 48-174 26-151 (158)
158 3fw2_A Thiol-disulfide oxidore 99.1 1.3E-10 4.3E-15 103.6 10.2 92 62-175 30-148 (150)
159 3lwa_A Secreted thiol-disulfid 99.1 8.7E-11 3E-15 108.3 9.3 113 47-175 41-181 (183)
160 3kcm_A Thioredoxin family prot 99.1 8.3E-11 2.9E-15 104.8 8.5 93 64-175 27-143 (154)
161 1kng_A Thiol:disulfide interch 99.1 5.9E-11 2E-15 105.9 7.2 89 65-175 42-152 (156)
162 3ha9_A Uncharacterized thiored 99.1 1.4E-10 4.8E-15 104.9 9.6 92 61-175 33-164 (165)
163 2lrt_A Uncharacterized protein 99.1 1.4E-10 4.8E-15 104.0 9.4 87 64-169 34-142 (152)
164 2b1k_A Thiol:disulfide interch 99.1 6E-11 2.1E-15 107.6 6.9 89 64-175 50-160 (168)
165 2fgx_A Putative thioredoxin; N 99.1 1E-10 3.6E-15 99.0 7.5 77 67-170 30-106 (107)
166 2cvb_A Probable thiol-disulfid 99.1 2.1E-10 7.1E-15 106.2 9.4 105 60-176 28-160 (188)
167 2ywi_A Hypothetical conserved 99.1 9.8E-11 3.3E-15 109.0 6.7 100 65-175 45-174 (196)
168 2hyx_A Protein DIPZ; thioredox 99.1 2.7E-10 9.2E-15 116.7 10.1 96 61-175 78-199 (352)
169 1jfu_A Thiol:disulfide interch 99.1 4.9E-10 1.7E-14 103.4 10.7 108 48-176 45-181 (186)
170 2dlx_A UBX domain-containing p 99.1 3.6E-10 1.2E-14 102.1 9.2 106 53-177 28-138 (153)
171 3kh7_A Thiol:disulfide interch 99.1 2.2E-10 7.4E-15 105.5 7.8 91 62-175 55-167 (176)
172 4fo5_A Thioredoxin-like protei 99.1 2.7E-10 9.3E-15 100.5 7.8 75 60-140 27-126 (143)
173 2lus_A Thioredoxion; CR-Trp16, 98.6 2E-11 6.8E-16 107.3 0.0 73 65-141 25-122 (143)
174 1ttz_A Conserved hypothetical 99.0 1.7E-10 5.9E-15 94.1 5.6 74 69-174 3-76 (87)
175 2ggt_A SCO1 protein homolog, m 99.0 8.3E-10 2.8E-14 99.3 8.7 97 64-175 22-161 (164)
176 3u5r_E Uncharacterized protein 99.0 9.3E-10 3.2E-14 105.0 9.2 117 47-175 42-187 (218)
177 2hls_A Protein disulfide oxido 99.0 1.6E-09 5.4E-14 105.3 10.0 98 54-174 15-116 (243)
178 3cmi_A Peroxiredoxin HYR1; thi 98.9 1.2E-09 4.1E-14 99.6 7.6 92 64-175 31-168 (171)
179 2rli_A SCO2 protein homolog, m 98.9 2.2E-09 7.4E-14 97.3 9.1 98 63-175 24-164 (171)
180 2p5q_A Glutathione peroxidase 98.9 2.2E-09 7.4E-14 97.1 8.1 93 64-175 31-168 (170)
181 2vup_A Glutathione peroxidase- 98.9 2.4E-09 8E-14 99.7 8.5 107 48-175 33-185 (190)
182 3dwv_A Glutathione peroxidase- 98.9 1.8E-09 6.1E-14 100.3 7.2 109 46-175 29-183 (187)
183 2e7p_A Glutaredoxin; thioredox 98.9 5.2E-10 1.8E-14 95.2 3.1 88 54-173 11-106 (116)
184 2ls5_A Uncharacterized protein 98.4 2.1E-10 7.1E-15 103.1 0.0 91 64-173 32-146 (159)
185 3drn_A Peroxiredoxin, bacterio 98.9 4E-09 1.4E-13 95.2 8.6 85 48-140 13-123 (161)
186 2p31_A CL683, glutathione pero 98.9 2.4E-09 8.2E-14 98.8 6.7 46 62-113 46-91 (181)
187 2k6v_A Putative cytochrome C o 98.9 2.5E-09 8.5E-14 96.9 6.3 98 60-173 30-171 (172)
188 2v1m_A Glutathione peroxidase; 98.8 4.6E-09 1.6E-13 94.8 8.0 44 64-113 30-73 (169)
189 3kij_A Probable glutathione pe 98.8 8.8E-09 3E-13 94.8 8.9 59 47-113 22-80 (180)
190 1xvw_A Hypothetical protein RV 98.8 5.4E-09 1.9E-13 93.8 7.0 72 64-141 34-135 (160)
191 2k8s_A Thioredoxin; dimer, str 98.8 3.8E-09 1.3E-13 84.0 5.1 61 69-139 4-64 (80)
192 1wjk_A C330018D20RIK protein; 98.8 2.4E-09 8.2E-14 89.5 3.3 81 66-175 16-96 (100)
193 2obi_A PHGPX, GPX-4, phospholi 98.8 7.7E-09 2.6E-13 95.4 7.0 58 48-113 32-89 (183)
194 2f8a_A Glutathione peroxidase 98.8 1.3E-08 4.3E-13 96.5 8.3 44 64-113 46-89 (208)
195 1eej_A Thiol:disulfide interch 98.8 1.7E-08 5.9E-13 96.1 9.1 84 64-174 85-210 (216)
196 1we0_A Alkyl hydroperoxide red 98.8 8.8E-09 3E-13 95.3 6.7 93 64-175 30-157 (187)
197 2bmx_A Alkyl hydroperoxidase C 98.8 1.2E-08 4E-13 95.3 7.6 93 64-175 44-170 (195)
198 2gs3_A PHGPX, GPX-4, phospholi 98.7 1.6E-08 5.4E-13 93.6 7.5 59 63-127 47-114 (185)
199 1ego_A Glutaredoxin; electron 98.7 2.7E-08 9.1E-13 79.5 7.7 77 69-174 3-83 (85)
200 3gyk_A 27KDA outer membrane pr 98.7 5E-08 1.7E-12 89.1 10.2 86 64-175 21-173 (175)
201 1hyu_A AHPF, alkyl hydroperoxi 98.7 3.6E-08 1.2E-12 106.3 10.7 96 49-172 102-197 (521)
202 1zof_A Alkyl hydroperoxide-red 98.7 1.2E-08 4.1E-13 95.4 6.1 92 64-174 32-160 (198)
203 1qmv_A Human thioredoxin perox 98.7 3.2E-08 1.1E-12 92.5 8.8 92 64-174 33-162 (197)
204 1uul_A Tryparedoxin peroxidase 98.7 4E-08 1.4E-12 92.2 8.1 96 64-174 35-164 (202)
205 1zye_A Thioredoxin-dependent p 98.6 4.2E-08 1.4E-12 93.7 7.9 96 64-174 55-184 (220)
206 2b7k_A SCO1 protein; metalloch 98.6 5E-08 1.7E-12 91.5 7.5 111 47-175 25-179 (200)
207 2h01_A 2-Cys peroxiredoxin; th 98.6 5.1E-08 1.7E-12 90.6 7.3 96 64-174 30-158 (192)
208 1t3b_A Thiol:disulfide interch 98.6 1E-07 3.4E-12 90.5 8.6 84 64-172 85-208 (211)
209 1xzo_A BSSCO, hypothetical pro 98.6 9.3E-08 3.2E-12 86.7 7.4 46 64-113 32-78 (174)
210 3gkn_A Bacterioferritin comigr 98.6 1E-07 3.4E-12 85.8 7.4 71 64-140 34-137 (163)
211 3ztl_A Thioredoxin peroxidase; 98.5 1.8E-07 6E-12 89.4 8.9 92 62-172 66-195 (222)
212 2i81_A 2-Cys peroxiredoxin; st 98.5 1.5E-07 5.2E-12 89.3 8.1 96 64-174 51-179 (213)
213 2jsy_A Probable thiol peroxida 98.5 2.3E-07 8E-12 83.8 7.9 89 65-174 44-166 (167)
214 4f9z_D Endoplasmic reticulum r 98.5 1.1E-06 3.6E-11 84.1 12.6 111 45-175 112-225 (227)
215 3ixr_A Bacterioferritin comigr 98.4 3.7E-07 1.3E-11 84.0 7.8 86 47-140 35-153 (179)
216 2i3y_A Epididymal secretory gl 98.4 8.5E-07 2.9E-11 84.4 10.3 58 47-113 39-97 (215)
217 4g2e_A Peroxiredoxin; redox pr 98.4 5.8E-08 2E-12 87.5 2.0 98 61-172 26-155 (157)
218 2a4v_A Peroxiredoxin DOT5; yea 98.4 4.2E-07 1.4E-11 81.5 6.9 68 66-141 36-130 (159)
219 3hd5_A Thiol:disulfide interch 98.4 1.1E-06 3.7E-11 81.8 9.0 41 65-112 25-65 (195)
220 2pn8_A Peroxiredoxin-4; thiore 98.3 1.1E-06 3.6E-11 83.3 8.7 96 64-174 47-176 (211)
221 1xvq_A Thiol peroxidase; thior 98.3 8.6E-07 2.9E-11 81.1 7.4 69 64-141 43-142 (175)
222 1v58_A Thiol:disulfide interch 98.3 1.1E-06 3.8E-11 85.0 8.5 87 65-174 97-232 (241)
223 3h93_A Thiol:disulfide interch 98.3 1.3E-06 4.3E-11 81.1 8.5 31 65-95 25-55 (192)
224 3me7_A Putative uncharacterize 98.3 1.6E-06 5.6E-11 78.9 8.7 96 64-176 27-163 (170)
225 2c0d_A Thioredoxin peroxidase 98.3 1.1E-06 3.6E-11 84.0 7.5 96 64-174 55-183 (221)
226 2r37_A Glutathione peroxidase 98.3 2.6E-06 8.7E-11 80.5 9.2 46 61-113 34-79 (207)
227 3qpm_A Peroxiredoxin; oxidored 98.2 2.6E-06 8.8E-11 82.4 9.3 98 61-173 73-204 (240)
228 4gqc_A Thiol peroxidase, perox 98.2 1.3E-07 4.6E-12 85.9 -0.4 97 65-175 33-160 (164)
229 3a2v_A Probable peroxiredoxin; 98.2 1.9E-06 6.6E-11 83.8 7.1 95 65-174 33-161 (249)
230 1n8j_A AHPC, alkyl hydroperoxi 98.2 2.7E-06 9.2E-11 78.7 7.7 91 65-174 30-155 (186)
231 1psq_A Probable thiol peroxida 98.2 2.5E-06 8.4E-11 76.9 7.2 44 62-113 39-83 (163)
232 1nm3_A Protein HI0572; hybrid, 98.2 3.4E-06 1.1E-10 81.2 8.4 71 65-141 33-137 (241)
233 1kte_A Thioltransferase; redox 98.2 8.6E-07 2.9E-11 73.8 3.4 70 55-140 4-78 (105)
234 2wfc_A Peroxiredoxin 5, PRDX5; 98.1 2.6E-06 8.7E-11 77.6 6.5 43 65-113 31-76 (167)
235 3hz8_A Thiol:disulfide interch 98.1 9.2E-06 3.1E-10 75.6 10.3 41 65-112 24-64 (193)
236 1h75_A Glutaredoxin-like prote 98.1 1.9E-06 6.6E-11 67.9 4.3 52 69-133 3-55 (81)
237 3p7x_A Probable thiol peroxida 98.1 2.4E-06 8.1E-11 77.2 5.4 106 48-172 31-165 (166)
238 4f9z_D Endoplasmic reticulum r 98.1 6.1E-06 2.1E-10 78.8 8.5 100 46-176 9-113 (227)
239 2l4c_A Endoplasmic reticulum r 98.1 1.9E-05 6.5E-10 68.3 10.4 97 46-173 21-122 (124)
240 1un2_A DSBA, thiol-disulfide i 98.1 3.4E-07 1.2E-11 86.0 -0.9 42 65-113 113-157 (197)
241 1r7h_A NRDH-redoxin; thioredox 98.1 9.8E-06 3.3E-10 62.6 7.3 51 69-134 3-56 (75)
242 3tjj_A Peroxiredoxin-4; thiore 98.1 5.3E-06 1.8E-10 80.9 7.1 97 61-172 87-217 (254)
243 1tp9_A Peroxiredoxin, PRX D (t 98.0 5.2E-06 1.8E-10 74.9 6.4 42 65-112 35-79 (162)
244 2znm_A Thiol:disulfide interch 98.0 1.1E-05 3.9E-10 74.6 8.6 32 64-95 21-52 (195)
245 2yzh_A Probable thiol peroxida 98.0 5.2E-06 1.8E-10 75.3 6.0 62 61-130 43-106 (171)
246 3uma_A Hypothetical peroxiredo 98.0 6.9E-06 2.4E-10 76.1 6.9 43 65-113 56-101 (184)
247 2hze_A Glutaredoxin-1; thiored 98.0 3E-06 1E-10 72.0 3.9 61 68-140 20-85 (114)
248 3mng_A Peroxiredoxin-5, mitoch 98.0 5.9E-06 2E-10 75.8 6.0 33 65-97 43-77 (173)
249 3zrd_A Thiol peroxidase; oxido 98.0 8.9E-06 3E-10 76.2 7.1 84 48-141 63-178 (200)
250 1q98_A Thiol peroxidase, TPX; 98.0 8.4E-06 2.9E-10 73.6 6.1 44 62-113 40-84 (165)
251 2cq9_A GLRX2 protein, glutared 97.9 2.9E-06 1E-10 74.0 2.2 69 53-140 17-90 (130)
252 1z6m_A Conserved hypothetical 97.9 3.8E-05 1.3E-09 69.7 9.7 31 64-94 26-56 (175)
253 2rem_A Disulfide oxidoreductas 97.9 4.3E-05 1.5E-09 70.4 9.7 31 65-95 25-55 (193)
254 2ht9_A Glutaredoxin-2; thiored 97.9 4.1E-06 1.4E-10 74.7 2.5 70 53-141 39-113 (146)
255 3gv1_A Disulfide interchange p 97.8 3.7E-05 1.3E-09 68.5 8.0 82 64-174 13-138 (147)
256 1sji_A Calsequestrin 2, calseq 97.8 0.00012 4.2E-09 74.3 12.6 115 46-176 226-347 (350)
257 3l9v_A Putative thiol-disulfid 97.8 2.5E-05 8.4E-10 72.4 6.4 40 66-112 15-57 (189)
258 3c1r_A Glutaredoxin-1; oxidize 97.8 1E-05 3.4E-10 69.3 3.3 67 54-134 16-88 (118)
259 4dvc_A Thiol:disulfide interch 97.8 8.8E-05 3E-09 67.4 9.6 32 65-96 21-52 (184)
260 1prx_A HORF6; peroxiredoxin, h 97.8 0.0001 3.5E-09 70.3 10.1 41 67-113 34-74 (224)
261 2v2g_A Peroxiredoxin 6; oxidor 97.7 5.7E-05 2E-09 72.6 8.2 42 66-113 30-72 (233)
262 1xcc_A 1-Cys peroxiredoxin; un 97.7 4.1E-05 1.4E-09 72.9 6.7 93 67-174 34-165 (220)
263 2klx_A Glutaredoxin; thioredox 97.7 3.7E-05 1.3E-09 61.8 5.3 53 69-134 8-61 (89)
264 4hde_A SCO1/SENC family lipopr 97.7 7E-05 2.4E-09 68.1 7.7 63 45-113 14-77 (170)
265 2ec4_A FAS-associated factor 1 97.7 0.00027 9.1E-09 65.0 11.6 108 51-174 35-167 (178)
266 2h8l_A Protein disulfide-isome 97.6 0.00021 7.1E-09 69.1 10.4 108 47-178 7-116 (252)
267 2pwj_A Mitochondrial peroxired 97.6 3.4E-05 1.1E-09 70.3 4.1 60 66-131 45-108 (171)
268 3us3_A Calsequestrin-1; calciu 97.6 0.00018 6.2E-09 73.7 9.9 102 46-176 125-228 (367)
269 3ic4_A Glutaredoxin (GRX-1); s 97.5 7.7E-05 2.6E-09 60.2 4.6 71 69-171 14-91 (92)
270 3keb_A Probable thiol peroxida 97.5 0.00014 4.8E-09 69.4 6.4 95 61-174 44-175 (224)
271 2yan_A Glutaredoxin-3; oxidore 97.5 0.00014 4.9E-09 60.5 5.7 68 54-140 8-82 (105)
272 3msz_A Glutaredoxin 1; alpha-b 97.4 0.00014 4.7E-09 57.9 5.1 56 68-134 5-67 (89)
273 3ec3_A Protein disulfide-isome 97.4 0.00049 1.7E-08 66.5 9.8 107 46-176 6-116 (250)
274 3sbc_A Peroxiredoxin TSA1; alp 97.4 0.00036 1.2E-08 66.0 8.0 99 60-173 47-179 (216)
275 3rhb_A ATGRXC5, glutaredoxin-C 97.3 9.1E-05 3.1E-09 62.4 3.1 68 54-140 10-83 (113)
276 3nzn_A Glutaredoxin; structura 97.3 0.0005 1.7E-08 56.9 7.4 54 68-134 23-83 (103)
277 3l9s_A Thiol:disulfide interch 97.3 0.00038 1.3E-08 64.6 6.9 30 66-95 22-54 (191)
278 1fov_A Glutaredoxin 3, GRX3; a 97.2 0.00021 7.2E-09 55.9 3.9 53 69-134 3-57 (82)
279 4eo3_A Bacterioferritin comigr 97.2 0.00051 1.7E-08 69.2 7.1 112 47-180 8-144 (322)
280 3gha_A Disulfide bond formatio 97.1 0.0025 8.6E-08 59.5 10.9 43 64-111 28-71 (202)
281 2khp_A Glutaredoxin; thioredox 97.0 0.00058 2E-08 54.9 4.8 52 69-133 8-61 (92)
282 3ctg_A Glutaredoxin-2; reduced 97.0 0.00028 9.7E-09 61.2 3.0 68 53-134 27-100 (129)
283 3h8q_A Thioredoxin reductase 3 97.0 0.00081 2.8E-08 56.8 5.6 68 54-140 8-80 (114)
284 3tue_A Tryparedoxin peroxidase 97.0 0.0014 4.8E-08 62.1 7.3 99 60-173 51-183 (219)
285 3bj5_A Protein disulfide-isome 96.9 0.0078 2.7E-07 53.2 11.8 112 46-177 14-129 (147)
286 3qmx_A Glutaredoxin A, glutare 96.9 0.00079 2.7E-08 55.5 4.8 54 68-134 17-73 (99)
287 2lqo_A Putative glutaredoxin R 96.9 0.0018 6.1E-08 52.7 6.6 76 69-175 6-84 (92)
288 3f4s_A Alpha-DSBA1, putative u 96.8 0.007 2.4E-07 57.6 11.3 42 65-111 39-81 (226)
289 2r2j_A Thioredoxin domain-cont 96.6 0.0085 2.9E-07 61.3 10.3 111 46-178 219-332 (382)
290 1wik_A Thioredoxin-like protei 96.5 0.0032 1.1E-07 52.5 5.7 64 53-133 5-75 (109)
291 3feu_A Putative lipoprotein; a 96.5 0.0013 4.3E-08 60.6 3.0 30 65-94 22-51 (185)
292 4f82_A Thioredoxin reductase; 96.0 0.013 4.6E-07 53.4 7.2 69 55-132 40-113 (176)
293 3bci_A Disulfide bond protein 95.8 0.051 1.8E-06 49.3 10.5 31 65-95 11-42 (186)
294 3gmf_A Protein-disulfide isome 95.2 0.11 3.7E-06 48.4 10.6 42 65-111 15-57 (205)
295 2h8l_A Protein disulfide-isome 95.1 0.062 2.1E-06 51.4 8.8 109 46-177 114-232 (252)
296 3l4n_A Monothiol glutaredoxin- 95.0 0.019 6.5E-07 49.5 4.3 67 54-134 5-76 (127)
297 3q6o_A Sulfhydryl oxidase 1; p 94.3 0.18 6.2E-06 47.7 9.8 75 48-137 140-214 (244)
298 2axo_A Hypothetical protein AT 94.3 0.16 5.5E-06 49.4 9.4 81 67-174 44-142 (270)
299 3ed3_A Protein disulfide-isome 94.2 0.11 3.7E-06 51.3 8.2 103 46-175 143-267 (298)
300 3tdg_A DSBG, putative uncharac 93.4 0.12 4.1E-06 50.3 6.6 29 65-93 147-175 (273)
301 2wci_A Glutaredoxin-4; redox-a 93.2 0.04 1.4E-06 48.0 2.6 65 54-134 26-96 (135)
302 3c7m_A Thiol:disulfide interch 92.9 0.1 3.6E-06 47.2 5.2 41 65-112 17-58 (195)
303 3t58_A Sulfhydryl oxidase 1; o 92.8 0.19 6.5E-06 53.6 7.6 77 47-138 139-215 (519)
304 1aba_A Glutaredoxin; electron 92.8 0.061 2.1E-06 42.5 2.9 53 69-134 2-70 (87)
305 3zyw_A Glutaredoxin-3; metal b 92.1 0.12 4.2E-06 43.1 4.1 62 56-134 9-77 (111)
306 1nm3_A Protein HI0572; hybrid, 92.0 0.21 7.1E-06 47.2 6.2 54 68-134 171-225 (241)
307 3ec3_A Protein disulfide-isome 91.7 0.96 3.3E-05 43.0 10.5 106 46-177 116-230 (250)
308 1xiy_A Peroxiredoxin, pfaop; a 91.5 0.39 1.3E-05 43.8 7.2 62 65-132 43-109 (182)
309 2jwa_A Receptor tyrosine-prote 91.4 0.16 5.5E-06 34.9 3.3 29 479-507 15-44 (44)
310 3gx8_A Monothiol glutaredoxin- 91.3 0.28 9.5E-06 41.6 5.5 66 55-134 8-80 (121)
311 3ipz_A Monothiol glutaredoxin- 90.7 0.21 7.1E-06 41.4 4.1 63 55-134 10-79 (109)
312 2ct6_A SH3 domain-binding glut 90.5 0.33 1.1E-05 40.3 5.1 53 69-134 10-78 (111)
313 2wem_A Glutaredoxin-related pr 89.2 0.31 1.1E-05 41.2 4.0 64 54-134 11-82 (118)
314 1t1v_A SH3BGRL3, SH3 domain-bi 88.8 0.24 8.1E-06 39.6 2.9 53 69-134 4-66 (93)
315 2xhf_A Peroxiredoxin 5; oxidor 86.7 0.56 1.9E-05 42.3 4.3 57 65-127 42-101 (171)
316 3gn3_A Putative protein-disulf 85.0 1.1 3.9E-05 40.5 5.5 42 65-112 14-55 (182)
317 2in3_A Hypothetical protein; D 83.6 1.1 3.7E-05 41.2 4.8 47 116-175 164-210 (216)
318 2jad_A Yellow fluorescent prot 81.4 1.1 3.6E-05 45.4 4.0 67 56-134 254-324 (362)
319 3kzq_A Putative uncharacterize 75.1 2.4 8.1E-05 38.8 4.2 46 117-175 158-203 (208)
320 2ks1_B Epidermal growth factor 74.7 2.9 9.8E-05 28.8 3.4 30 477-506 13-42 (44)
321 2x8g_A Thioredoxin glutathione 73.5 2.4 8.3E-05 45.5 4.4 64 54-134 9-77 (598)
322 2l2t_A Receptor tyrosine-prote 73.3 2.2 7.6E-05 29.3 2.5 24 480-503 15-38 (44)
323 1u6t_A SH3 domain-binding glut 72.7 5.2 0.00018 33.8 5.3 58 68-134 1-70 (121)
324 3feu_A Putative lipoprotein; a 65.1 5.1 0.00017 36.0 4.0 44 116-174 140-183 (185)
325 3gn3_A Putative protein-disulf 62.7 6 0.0002 35.6 4.0 39 117-170 143-181 (182)
326 2imf_A HCCA isomerase, 2-hydro 59.8 7.4 0.00025 35.2 4.1 42 117-176 156-197 (203)
327 1t4y_A Adaptive-response senso 59.2 72 0.0024 26.0 9.9 84 68-172 13-96 (105)
328 2wul_A Glutaredoxin related pr 54.9 9.6 0.00033 31.9 3.6 66 53-134 10-82 (118)
329 3gl5_A Putative DSBA oxidoredu 47.9 17 0.00058 34.0 4.6 43 117-176 172-214 (239)
330 3c7m_A Thiol:disulfide interch 47.4 7.2 0.00025 34.6 1.8 43 117-174 151-193 (195)
331 2kw0_A CCMH protein; oxidoredu 42.0 15 0.0005 29.3 2.5 17 429-445 57-73 (90)
332 2hl7_A Cytochrome C-type bioge 41.8 14 0.00049 29.0 2.4 17 429-445 60-76 (84)
333 1rw1_A Conserved hypothetical 41.2 18 0.00063 29.6 3.2 21 69-89 2-22 (114)
334 1z3e_A Regulatory protein SPX; 41.2 18 0.00063 30.5 3.3 21 69-89 3-23 (132)
335 3fz5_A Possible 2-hydroxychrom 39.5 22 0.00076 32.1 3.8 38 117-172 162-199 (202)
336 2kok_A Arsenate reductase; bru 37.1 23 0.00079 29.3 3.2 21 69-89 7-27 (120)
337 2g2q_A Glutaredoxin-2; thiored 35.1 23 0.00079 29.5 2.7 36 66-112 2-37 (124)
338 3kzq_A Putative uncharacterize 32.7 39 0.0013 30.3 4.3 28 68-95 4-31 (208)
339 3l78_A Regulatory protein SPX; 31.8 32 0.0011 28.5 3.2 21 69-89 2-22 (120)
340 2lvu_A Zinc finger and BTB dom 36.2 11 0.00037 20.9 0.0 13 347-359 3-15 (26)
341 1un2_A DSBA, thiol-disulfide i 29.8 31 0.0011 31.2 3.1 19 116-134 38-56 (197)
342 2in3_A Hypothetical protein; D 28.9 50 0.0017 29.5 4.4 27 67-93 8-34 (216)
343 2k9y_A Ephrin type-A receptor 28.4 8.9 0.0003 25.5 -0.7 18 472-489 10-27 (41)
344 3fz4_A Putative arsenate reduc 25.7 47 0.0016 27.5 3.2 21 69-89 5-25 (120)
345 1zza_A Stannin, AG8_1; helix, 25.7 39 0.0013 25.5 2.3 25 465-492 5-29 (90)
346 2l9u_A Receptor tyrosine-prote 25.4 35 0.0012 21.9 1.7 23 476-502 11-33 (40)
347 1r4w_A Glutathione S-transfera 23.1 64 0.0022 29.4 4.0 40 115-170 169-210 (226)
348 2lvt_A Zinc finger and BTB dom 28.1 18 0.00063 20.4 0.0 13 347-359 3-15 (29)
349 3gkx_A Putative ARSC family re 21.9 51 0.0018 27.2 2.7 21 69-89 6-26 (120)
350 3irb_A Uncharacterized protein 21.4 15 0.0005 31.9 -0.9 17 401-417 55-71 (145)
351 2lvr_A Zinc finger and BTB dom 26.7 20 0.00069 20.2 0.0 13 347-359 4-16 (30)
No 1
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=100.00 E-value=1.8e-77 Score=631.97 Aligned_cols=382 Identities=25% Similarity=0.415 Sum_probs=281.0
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCC-CCCCeEEEEEEeccchhcHHHHH
Q 010286 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNA-AHPGIILMTRVDCALKINTNLCD 122 (513)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~-~~~~~v~~~~VDc~~d~n~~lc~ 122 (513)
....|+.|+.++|++.+.+.+++++||+|||+||++|+.+.|.|+++++.+.+... ...+.+.|+.|||+ ++.++|+
T Consensus 21 ~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d--~~~~la~ 98 (470)
T 3qcp_A 21 LDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA--SEVDLCR 98 (470)
T ss_dssp TCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT--TCHHHHH
T ss_pred CCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC--CCHHHHH
Confidence 45679999999999988765567899999999999999999999999999864210 00025999999994 6899999
Q ss_pred HCCCCccceEEEecCCcccCC-CCCCccccchhhhccCcCCHHHHHHHH----HHhc-----------cccCCCCccccc
Q 010286 123 KFSVGHYPMLLWGSPSKFVAG-SWEPNQEKKEIRALEDWQTADGLLTWI----NKQT-----------SRSYGLDDEKFE 186 (513)
Q Consensus 123 ~f~I~~~PTl~~f~~g~~~~~-~~~~~~~~~~v~~~~g~~~~e~L~~~i----~~~l-----------~~~~~l~~~~~~ 186 (513)
+|+|+++||+++|.+|..... ......+...+..+....+.++|...+ ++++ +..+.|++++.+
T Consensus 99 ~y~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Link~~~~~~~~~e~c~~~~~~l~~~k~e 178 (470)
T 3qcp_A 99 KYDINFVPRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVNKHMVVDDSLKERCIDMHFKLYTSKEE 178 (470)
T ss_dssp HTTCCSSCEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCccCeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhhhccccCCccccchhhceecccccchh
Confidence 999999999999975532110 000000111122223334555555444 4444 333445555544
Q ss_pred cc--cCCCCCCCc----cchhHhHhHhhhhhhHHHHHH-HhhhccchhhHHHHHHHHHHHHHhcCCccccchhHHHHHhh
Q 010286 187 NE--QLPSNISDP----GQIARAVYDVEEATTTAFDII-LDHKMIKSETRASLIRFLQVLVAHHPSRRCRKGSAKVLVNF 259 (513)
Q Consensus 187 ~~--~~~~~~~~~----~~~~~~~~Dle~a~~~a~~~i-l~~~~l~ge~l~al~~Fl~vl~~~~P~~~~r~~~~~lL~~l 259 (513)
++ .+.. +.+. +.......|+|+|+.++++.. ..+++++|+++.||++|+.+|+++||++. ...+|..+
T Consensus 179 ~~~~~~~~-~~~~~~~~~~s~~y~~Dle~al~~~L~~ev~~~~~~~g~~l~al~~fl~~l~~~~P~~~----~~~~~~~l 253 (470)
T 3qcp_A 179 LVKRSVSS-TDESGRFVETTELYATDIAGAFFSAMHYDVSLVGTEPRERLTALEDFVLLVKDSLPSIG----ADGVVSAL 253 (470)
T ss_dssp HHHTTC--------CCCCCCSCCHHHHHHHHHHHHHTHHHHHCSCSHHHHHHHHHHHHHHHHHSTTSS----HHHHHHHH
T ss_pred hhhhhccc-ccccccccchhhehHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCCCcc----HHHHHHHH
Confidence 32 1111 1111 111112359999998888854 56788999999999999999999999852 12355555
Q ss_pred hhcCCCCccchhhHHHhhccCCCCCCCcCccCCCCCCC-CcccccCCCCCcCcccccHHHHHHHHhhcCCCCCCHHHHHH
Q 010286 260 DDFSPSHMQSADKQEVVNNNGKGGLGNFPICGKEVPRG-YWIFCRGSKNDTRGFSCGLWVLLHSLSVRIDDGESQFTFTA 338 (513)
Q Consensus 260 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~i~g~~~p~~-~w~~C~gS~~~~Rgy~CglW~l~H~ltv~~~~~~~~~~~~~ 338 (513)
..++....+.. .++.. .+.+..+++..+|++ +|++|+||+|++||||||||+|||+|||++|+ .+.++.+
T Consensus 254 ~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~w~~C~gs~~~~rg~~CslW~l~Htlt~~~~~--~~~~~~~ 324 (470)
T 3qcp_A 254 ESITAERPFTV--ASWQD-----AVVKSGIPFDGSPRNVRWRTCRGSSPQYRGFPCGMWLLLHALTVNTPA--DRNVLEV 324 (470)
T ss_dssp HTCCSSSCCCH--HHHHH-----HHHHTCCCCSEETTEECCSTTCCSSTTSSSHHHHHHHHHHHHHHHCCT--TCCHHHH
T ss_pred HHHhhcCCCCH--HHHHH-----HHHhccCCcCCCCCCCcccccCCCCCccCCcCchHHHHHHHHHhhCCC--ChHHHHH
Confidence 44333333321 22211 111223455556766 89999999999999999999999999999998 4779999
Q ss_pred HHHHhHhccCChHHHHHHHHHhcCCCCChhHHHHHHHHhhhhhhhhhcccccccCCCCCCCCCCCCCCCCCChhhhccCC
Q 010286 339 VCDFIHNFFVCEECRQHFYQMCSSPFNKTRDFALWLWSTHNQVNERLMKLEASLKTGDPKFPKIIWPPKQLCSSCYRSHH 418 (513)
Q Consensus 339 ~~~~v~~ff~C~~C~~hf~~~~~~~~~~~~~~~lWlw~~HN~VN~rl~~~~~~~~~~dp~fpk~~~P~~~~Cp~C~~~~~ 418 (513)
|++||++||||++|++||++|+ +++++++++|||++||+||+||+|++ ++|||+|||+|||++++||+||...
T Consensus 325 ~~~~~~~ffpC~~Ca~hF~~~~---~~s~~~~~lWlw~~HN~VN~rL~~~~---~~~dp~fpk~~~P~~~~C~~C~~~~- 397 (470)
T 3qcp_A 325 IQNYIRYFFSCKECRDHFIQFN---FSPNEDPVLQLWRAHNNVNARLANVK---DGADPLVPKRQFPTLEACTECYDGA- 397 (470)
T ss_dssp HHHHHHHHCSCHHHHHHHTTCC---CCSSSCHHHHHHHHHHHHHHHHTTCC---TTSCTTSCCCCSSCTTTCSSSSCSS-
T ss_pred HHHHHHHccCcHHHHHHHHHHh---ccCHHHHHHHHHHHhCHHHHhcCCCC---CCCCCCCCccCCCCchhChhhhcCC-
Confidence 9999999999999999999988 78999999999999999999999963 7999999999999999999999743
Q ss_pred CCCCcccCCCCChHHHHHHHHHHhCCC--ccccccccccc
Q 010286 419 HGDMKFRQIDWDQDEVFKFLTNYYGNT--LVSLYKDREFL 456 (513)
Q Consensus 419 ~~~~~~~~~~w~e~~V~~fL~~~Y~~~--~~~~~~~~~~~ 456 (513)
+.|||++||+||++||+.+ +++.+++.+.+
T Consensus 398 --------~~w~~~~v~~~l~~~y~~~~~~~~~~~~~~~~ 429 (470)
T 3qcp_A 398 --------GNFIEAHVTGFLKQRYLWDPKAVGLMESNDDL 429 (470)
T ss_dssp --------SSCCTTHHHHHHHHHTCCCHHHHSSCCCGGGG
T ss_pred --------CCCCHHHHHHHHHHHhCCCcchhhhhcccCCc
Confidence 4799999999999999965 66788877764
No 2
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=100.00 E-value=8.7e-76 Score=633.26 Aligned_cols=372 Identities=23% Similarity=0.452 Sum_probs=285.3
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHH
Q 010286 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (513)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~ 122 (513)
...+.|+++++++|+..+.++ ++++||+|||+|||+|++++|.|+++++++.+++ ..+.|+.|||+.+++.++|+
T Consensus 9 ~~~~~V~~Lt~~~f~~~v~~~-~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~----~~v~~~~VD~d~d~~~~l~~ 83 (519)
T 3t58_A 9 SSSDPLTLLDADSVRPTVLGS-SSAWAVEFFASWCGHAIAFAPTWKELANDVKDWR----PALNLAVLDCAEETNSAVCR 83 (519)
T ss_dssp CTTSSSEEECTTTHHHHHSSC-SSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGT----TTEEEEEEETTSGGGHHHHH
T ss_pred CCCCCcEECChHHHHHHHHhC-CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcC----CcEEEEEEECCccccHHHHH
Confidence 345679999999999988765 4789999999999999999999999999997532 36999999998778999999
Q ss_pred HCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccccCC-----------CCc---------
Q 010286 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSYG-----------LDD--------- 182 (513)
Q Consensus 123 ~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~~~-----------l~~--------- 182 (513)
+|+|+++||+++|.+|+..+ ..+..+.|.++.+.|.++|.+.+..... ++.
T Consensus 84 ~~~V~~~PTl~~f~~g~~~G---------~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~ 154 (519)
T 3t58_A 84 EFNIAGFPTVRFFQAFTKNG---------SGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTR 154 (519)
T ss_dssp HTTCCSBSEEEEECTTCCSC---------CCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGS
T ss_pred HcCCcccCEEEEEcCcccCC---------CceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhcc
Confidence 99999999999998763221 2233456778888888888877653220 000
Q ss_pred --cccc-------------------------------c-----------ccCCC-------------C--CCC-------
Q 010286 183 --EKFE-------------------------------N-----------EQLPS-------------N--ISD------- 196 (513)
Q Consensus 183 --~~~~-------------------------------~-----------~~~~~-------------~--~~~------- 196 (513)
.++. + ...|. + ...
T Consensus 155 ~~~~~vallF~~~~s~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~~Pslvl~~~nGk~~~~~v~~~~r~~~~~~ 234 (519)
T 3t58_A 155 NKADYLALVFEREDSYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTDFPSCYLLLRNGSVSRVPVLVESRSFYTSY 234 (519)
T ss_dssp CCCSEEEEEEECTTCCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSCSHHHHHHH
T ss_pred CCCCeEEEEecCCchHHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCCCCeEEEEeCCCceeecccccccHHHHHHH
Confidence 0000 0 00000 0 000
Q ss_pred -----------------c---cch---hH------h--HhHhhhhhhHHHHH-HHhhhccchhhHHHHHHHHHHHHHhcC
Q 010286 197 -----------------P---GQI---AR------A--VYDVEEATTTAFDI-ILDHKMIKSETRASLIRFLQVLVAHHP 244 (513)
Q Consensus 197 -----------------~---~~~---~~------~--~~Dle~a~~~a~~~-il~~~~l~ge~l~al~~Fl~vl~~~~P 244 (513)
+ ..+ +. . ..|||+|++++++. +..+++|+|+++.||++|+.+|+++||
T Consensus 235 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~Dle~al~~~l~~ev~~~~~~~g~~l~al~~~~~~l~~~~P 314 (519)
T 3t58_A 235 LRGLPGLTRDAPPTTATPVTADKIAPTVWKFADRSKIYMADLESALHYILRVEVGKFSVLEGQRLVALKKFVAVLAKYFP 314 (519)
T ss_dssp HTTSTTCCCCCCC----------CCCCHHHHSCTTCEEHHHHHHHHHHHHHTTGGGCSEEEHHHHHHHHHHHHHHHHHCC
T ss_pred HHHccCCCCCCCCCCCCCCccccccchhhhhccccceeHHHHHHHHHHHHHHHhcccccccCchHHHHHHHHHHHHHHCC
Confidence 0 000 00 1 23999998888874 456789999999999999999999999
Q ss_pred CccccchhHHHHHhhhhcCCC---CccchhhHHHhhccCCCCCCCcCccCCCCCCC-CcccccCCCCCcCcccccHHHHH
Q 010286 245 SRRCRKGSAKVLVNFDDFSPS---HMQSADKQEVVNNNGKGGLGNFPICGKEVPRG-YWIFCRGSKNDTRGFSCGLWVLL 320 (513)
Q Consensus 245 ~~~~r~~~~~lL~~l~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~i~g~~~p~~-~w~~C~gS~~~~Rgy~CglW~l~ 320 (513)
++. ....+|..+.+++.. ....+ +++... +++. ..|.++|.+ +|++|+||+|++||||||||+||
T Consensus 315 ~~~---~~~~~l~~l~~~l~~~~~~~~~~--~~~~~~-----~~~~-~~~~~~~~~~~w~~C~gs~~~~rg~~C~lW~l~ 383 (519)
T 3t58_A 315 GQP---LVQNFLHSINDWLQKQQKKRIPY--SFFKAA-----LDSR-KEDAVLTEKVNWVGCQGSEPHFRGFPCSLWVLF 383 (519)
T ss_dssp CCH---HHHHHHHHHHHHHHHCCCSEEEH--HHHHHH-----HHHT-THHHHTCSSCCCSTTBCSSTTSBSHHHHHHHHH
T ss_pred Cch---HHHHHHHHHHHHHHhcccccCCH--HHHHHH-----HHhc-ccCCcCCCCCCcccCCCCCcccCCcCcHHHHHH
Confidence 964 345566555543321 22211 122111 1111 125556765 99999999999999999999999
Q ss_pred HHHhhcCCCC---------CCHHHHHHHHHHhHhccCChHHHHHHHHHhcC---CCCChhHHHHHHHHhhhhhhhhhccc
Q 010286 321 HSLSVRIDDG---------ESQFTFTAVCDFIHNFFVCEECRQHFYQMCSS---PFNKTRDFALWLWSTHNQVNERLMKL 388 (513)
Q Consensus 321 H~ltv~~~~~---------~~~~~~~~~~~~v~~ff~C~~C~~hf~~~~~~---~~~~~~~~~lWlw~~HN~VN~rl~~~ 388 (513)
|+|||++|+. +++.++.+|++||++||||++||+||++|+.+ +++|++++++|||++||+||+||+|+
T Consensus 384 Htltv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ff~C~~Ca~hF~~~~~~~~~~v~s~~~~~~Wlw~~HN~VN~rL~~~ 463 (519)
T 3t58_A 384 HFLTVQANRYSEAHPQEPADGQEVLQAMRSYVQFFFGCRDSADHFEQMAAASMHQVRSPSNAILWLWTSHNRVNARLSGA 463 (519)
T ss_dssp HHHHHHHHHHHHTSTTSCCCSCHHHHHHHHHHHHHCSBHHHHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHccCccCCccccccccchHHHHHHHHHHHHHCCCchHHHHHHHHHHhhCCCcCCCHHHHHHHHHHhhCHHHhhcCCC
Confidence 9999999753 45689999999999999999999999999987 79999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCCCCCCCChhhhccCCCCCCcccCCCCChHHHHHHHHHHhCCCccc
Q 010286 389 EASLKTGDPKFPKIIWPPKQLCSSCYRSHHHGDMKFRQIDWDQDEVFKFLTNYYGNTLVS 448 (513)
Q Consensus 389 ~~~~~~~dp~fpk~~~P~~~~Cp~C~~~~~~~~~~~~~~~w~e~~V~~fL~~~Y~~~~~~ 448 (513)
++|||+|||+|||++++||+||.+++.+ .++|||++||+||++||+.++++
T Consensus 464 ----~~~dp~f~k~q~P~~~~C~~C~~~~~~~-----~~~w~~~~v~~fl~~~y~~~n~~ 514 (519)
T 3t58_A 464 ----LSEDPHFPKVQWPPRELCSACHNELNGQ-----VPLWDLGATLNFLKAHFSPANIV 514 (519)
T ss_dssp ----TTCCTTSCCCSSSCTTTCSTTBCSCTTS-----CCCBCHHHHHHHHHHHTSGGGEE
T ss_pred ----CCCCCCCCccCCCCchhChhhhhcccCC-----cccCCHHHHHHHHHHHcCccccc
Confidence 8999999999999999999999876322 46899999999999999999875
No 3
>3llk_A Sulfhydryl oxidase 1; disulfide, flavin adenine dinucleotide, alternative splicing, FAD, flavoprotein, glycoprotein, GOLG apparatus, membrane; HET: FAD FLC; 2.00A {Homo sapiens} PDB: 3lli_A*
Probab=100.00 E-value=1.3e-63 Score=484.40 Aligned_cols=223 Identities=30% Similarity=0.610 Sum_probs=182.3
Q ss_pred hHhhhhhhHHHHH-HHhhhccchhhHHHHHHHHHHHHHhcCCccccchhHHHHHhhhhcCC---CCccchhhHHHhhccC
Q 010286 205 YDVEEATTTAFDI-ILDHKMIKSETRASLIRFLQVLVAHHPSRRCRKGSAKVLVNFDDFSP---SHMQSADKQEVVNNNG 280 (513)
Q Consensus 205 ~Dle~a~~~a~~~-il~~~~l~ge~l~al~~Fl~vl~~~~P~~~~r~~~~~lL~~l~~~~~---~~~~~~~~~e~~~~~~ 280 (513)
.|||+|+.++++. +..+++|+|+++.||++|+++|+++||++. ....+|..+.+... .....+ +++.+.
T Consensus 17 aDLe~al~~~L~~Ev~~~~~i~g~~l~AL~~fl~vl~~~~P~~~---~~~~~l~~l~~~l~~~~~~~i~~--~~~~~~-- 89 (261)
T 3llk_A 17 ADLESALHYILRIEVGRFPVLEGQRLVALKKFVAVLAKYFPGRP---LVQNFLHSVNEWLKRQKRNKIPY--SFFKTA-- 89 (261)
T ss_dssp HHHHHHHHHHHHTTGGGCSEEEHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHCCSSEEEH--HHHHHH--
T ss_pred HHHHHHHHHHHHHHhcCcCcCCCchhHHHHHHHHHHHHHCCCcH---HHHHHHHHHHHHHHhCcccCCCH--HHHHHH--
Confidence 4999998888874 456778999999999999999999999863 44566655554332 122221 112111
Q ss_pred CCCCCCcCccCCCCCCC-CcccccCCCCCcCcccccHHHHHHHHhhcCCCC---------CCHHHHHHHHHHhHhccCCh
Q 010286 281 KGGLGNFPICGKEVPRG-YWIFCRGSKNDTRGFSCGLWVLLHSLSVRIDDG---------ESQFTFTAVCDFIHNFFVCE 350 (513)
Q Consensus 281 ~~~~~~~~i~g~~~p~~-~w~~C~gS~~~~Rgy~CglW~l~H~ltv~~~~~---------~~~~~~~~~~~~v~~ff~C~ 350 (513)
+++. ..|..++.+ +|++|+||+|++||||||||+|||+|||++++. ++++++++|++||++||||+
T Consensus 90 ---l~~~-~~~~~~~~~~~WvgC~GS~p~~RGy~CgLW~LFH~LTV~a~~~~~~~~~~~~~~~~vl~ai~~fv~~FypC~ 165 (261)
T 3llk_A 90 ---LDDR-KEGAVLAKKVNWIGCQGSEPHFRGFPCSLWVLFHFLTVQAARQNVDHSQEAAKAKEVLPAIRGYVHYFFGCR 165 (261)
T ss_dssp ---HHHT-THHHHTCSSCCCSTTCCSSTTSSSHHHHHHHHHHHHHHHHHCC---------CGGGHHHHHHHHHHHHCSCH
T ss_pred ---HHhh-hccCccCCCCcccccCCCCCccCCcCcHHHHHHHHHHhhhhcccccccccccCHHHHHHHHHHHHHHcCCcH
Confidence 1111 113334544 999999999999999999999999999998654 35689999999999999999
Q ss_pred HHHHHHHHHhcC---CCCChhHHHHHHHHhhhhhhhhhcccccccCCCCCCCCCCCCCCCCCChhhhccCCCCCCcccCC
Q 010286 351 ECRQHFYQMCSS---PFNKTRDFALWLWSTHNQVNERLMKLEASLKTGDPKFPKIIWPPKQLCSSCYRSHHHGDMKFRQI 427 (513)
Q Consensus 351 ~C~~hf~~~~~~---~~~~~~~~~lWlw~~HN~VN~rl~~~~~~~~~~dp~fpk~~~P~~~~Cp~C~~~~~~~~~~~~~~ 427 (513)
+|++||++|+.+ ++++++++++|||++||+||+||+|+ ++|||+|||+||||+++||+||.++++ .+
T Consensus 166 ~Ca~hF~~~~~~~~~~v~sr~~~~lWLw~~HN~VN~rLag~----~seDP~fpK~qwP~~~~Cp~C~~~~~~------~~ 235 (261)
T 3llk_A 166 DCASHFEQMAAASMHRVGSPNAAVLWLWSSHNRVNARLAGA----PSEDPQFPKVQWPPRELCSACHNERLD------VP 235 (261)
T ss_dssp HHHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHHHTTC----TTSCTTSCCCSSSCTTTCSTTBCCCSS------SC
T ss_pred HHHHHHHHHHhhCCCccCCHHHHHHHHHHhcCHHhhhcCCC----CCCCCCCCccCCCCchhChHHHhccCC------CC
Confidence 999999999977 79999999999999999999999998 899999999999999999999987642 47
Q ss_pred CCChHHHHHHHHHHhCCCccc
Q 010286 428 DWDQDEVFKFLTNYYGNTLVS 448 (513)
Q Consensus 428 ~w~e~~V~~fL~~~Y~~~~~~ 448 (513)
+|||++||+||++|||.+++.
T Consensus 236 ~W~~~~Vl~fLk~~y~~~nl~ 256 (261)
T 3llk_A 236 VWDVEATLNFLKAHFSPSNII 256 (261)
T ss_dssp SBCHHHHHHHHHHHTSGGGEE
T ss_pred CCCHHHHHHHHHHHcCccccc
Confidence 899999999999999998753
No 4
>1jr8_A ERV2 protein, mitochondrial; FAD, sulfhydryl oxidase, helical bundle, CXXC, oxidoreductase; HET: FAD; 1.50A {Saccharomyces cerevisiae} SCOP: a.24.15.1 PDB: 1jra_A*
Probab=99.93 E-value=2e-26 Score=198.52 Aligned_cols=78 Identities=24% Similarity=0.474 Sum_probs=70.9
Q ss_pred CcccccHHHHHHHHhhcCCCCCCH---HHHHHHHHHhHhccCChHHHHHHHHHhcC---CCCChhHHHHHHHHhhhhhhh
Q 010286 310 RGFSCGLWVLLHSLSVRIDDGESQ---FTFTAVCDFIHNFFVCEECRQHFYQMCSS---PFNKTRDFALWLWSTHNQVNE 383 (513)
Q Consensus 310 Rgy~CglW~l~H~ltv~~~~~~~~---~~~~~~~~~v~~ff~C~~C~~hf~~~~~~---~~~~~~~~~lWlw~~HN~VN~ 383 (513)
..+-||+|+|||+|||++|+.|+. .++..|..++.+||||.+||+||++|+++ +|+|++++++|||++||+||+
T Consensus 9 ~~lG~s~W~llHtlaa~~p~~pt~~~~~~l~~f~~~~~~fypC~~Ca~hF~~~~~~~p~~v~sr~~~~lWLw~~HN~VN~ 88 (117)
T 1jr8_A 9 KEVGRASWKYFHTLLARFPDEPTPEEREKLHTFIGLYAELYPCGECSYHFVKLIEKYPVQTSSRTAAAMWGCHIHNKVNE 88 (117)
T ss_dssp HHHHHHHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred hhccccHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 345699999999999999998874 57778888888899999999999999977 689999999999999999999
Q ss_pred hhcc
Q 010286 384 RLMK 387 (513)
Q Consensus 384 rl~~ 387 (513)
||+|
T Consensus 89 rL~k 92 (117)
T 1jr8_A 89 YLKK 92 (117)
T ss_dssp HTTC
T ss_pred HhCC
Confidence 9999
No 5
>2hj3_A Sulfhydryl oxidase ERV1P; four-helix bundle, flavin adenine dinucleotide, oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana}
Probab=99.93 E-value=2.6e-26 Score=199.98 Aligned_cols=96 Identities=22% Similarity=0.421 Sum_probs=79.4
Q ss_pred CCcCcccccHHHHHHHHhhcCCCCCCHH---HHHHHHHHhHhccCChHHHHHHHHHhcC---CCCChhHHHHHHHHhhhh
Q 010286 307 NDTRGFSCGLWVLLHSLSVRIDDGESQF---TFTAVCDFIHNFFVCEECRQHFYQMCSS---PFNKTRDFALWLWSTHNQ 380 (513)
Q Consensus 307 ~~~Rgy~CglW~l~H~ltv~~~~~~~~~---~~~~~~~~v~~ff~C~~C~~hf~~~~~~---~~~~~~~~~lWlw~~HN~ 380 (513)
|....+.||+|+|||+||+++|+.|+.. .+..+..++.+||||.+||+||++|+++ +|+|++++++|||++||+
T Consensus 8 ~~~~~lG~slW~llHtlaa~yp~~pt~~~~~~~~~f~~~~~~fypC~~Ca~hF~~~~~~~p~~v~sr~~~~lWLw~~HN~ 87 (125)
T 2hj3_A 8 VTKEDLGRATWTFLHTLAAQYPEKPTRQQKKDVKELMTILSRMYPCRECADHFKEILRSNPAQAGSQEEFSQWLCHVHNT 87 (125)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHH
T ss_pred CCccccCcchhHHHHHHHhhCcCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 3456788999999999999999998864 4566666788999999999999999987 689999999999999999
Q ss_pred hhhhhcccccccCCCCCCCCCCCCCCCCCCh
Q 010286 381 VNERLMKLEASLKTGDPKFPKIIWPPKQLCS 411 (513)
Q Consensus 381 VN~rl~~~~~~~~~~dp~fpk~~~P~~~~Cp 411 (513)
||+||+| |.||..+|.-.-.|.
T Consensus 88 VN~rL~K---------p~f~c~~~~~rw~~g 109 (125)
T 2hj3_A 88 VNRSLGK---------LVFPCERVDARWGKL 109 (125)
T ss_dssp HHHHTTC---------CCCCTTSHHHHCC--
T ss_pred HHHhhCC---------CCCCHHHHHHHhccC
Confidence 9999998 677765554444443
No 6
>3gwn_A Probable FAD-linked sulfhydryl oxidase R596; five helix bundle, homodimer, disulfide bond, flavoprot oxidoreductase, virion; HET: FAD; 1.78A {Acanthamoeba polyphaga mimivirus}
Probab=99.89 E-value=7.1e-24 Score=182.06 Aligned_cols=74 Identities=15% Similarity=0.408 Sum_probs=69.1
Q ss_pred ccHHHHHHHHhhcCCCCCCHHHHHHHHHHhH---hccCChHHHHHHHHHhcC-C-------CCChhHHHHHHHHhhhhhh
Q 010286 314 CGLWVLLHSLSVRIDDGESQFTFTAVCDFIH---NFFVCEECRQHFYQMCSS-P-------FNKTRDFALWLWSTHNQVN 382 (513)
Q Consensus 314 CglW~l~H~ltv~~~~~~~~~~~~~~~~~v~---~ff~C~~C~~hf~~~~~~-~-------~~~~~~~~lWlw~~HN~VN 382 (513)
-++|+|||+||+++|+.|+....++|++||. +||||.+|++||++|+++ + ++|++++++|||++||+||
T Consensus 11 rs~W~llHt~aa~~p~~pt~~~~~~~~~fi~~~~~~yPC~~Ca~hf~~~~~~~p~~~~~~~v~sr~~~~~Wlc~~HN~VN 90 (114)
T 3gwn_A 11 TAGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDVLPCRLCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAVN 90 (114)
T ss_dssp HHHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHTTSGGGCCCGGGGSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCcCCccccCCHHHHHHHHHHHHhHHH
Confidence 3689999999999999999999999999998 469999999999999976 4 7899999999999999999
Q ss_pred hhhcc
Q 010286 383 ERLMK 387 (513)
Q Consensus 383 ~rl~~ 387 (513)
+||+|
T Consensus 91 ~rLgK 95 (114)
T 3gwn_A 91 NKLEV 95 (114)
T ss_dssp HHTTC
T ss_pred HHhCC
Confidence 99999
No 7
>3gwl_A P14, FAD-linked sulfhydryl oxidase; homodimer, five-helix bundle, cytoplasm, disulfide bond, flavoprotein, late protein; HET: FAD; 2.10A {African swine fever virus BA71V}
Probab=99.88 E-value=5.3e-23 Score=174.21 Aligned_cols=72 Identities=29% Similarity=0.617 Sum_probs=63.1
Q ss_pred cHHHHHHHHhhcCCCCCCHH----HHHHHHHHhHhccCChHHHHHHHHHhcC---CCCChhHHHHHHHHhhhhhhhhhcc
Q 010286 315 GLWVLLHSLSVRIDDGESQF----TFTAVCDFIHNFFVCEECRQHFYQMCSS---PFNKTRDFALWLWSTHNQVNERLMK 387 (513)
Q Consensus 315 glW~l~H~ltv~~~~~~~~~----~~~~~~~~v~~ff~C~~C~~hf~~~~~~---~~~~~~~~~lWlw~~HN~VN~rl~~ 387 (513)
++|+|||+||++||+.|+.. ..+.|+.|++. |||.+|++||++++++ ++.+++++++|||++||+||+||+|
T Consensus 10 a~W~llHt~aa~yP~~Pt~~~~~~~~~~i~~f~~~-yPC~~Ca~hf~~~~~~~p~~~~s~~~~~lWlc~~HN~VN~rLgK 88 (106)
T 3gwl_A 10 KYWRSLHLYAIFFSDAPSWKEKYEAIQWILNFIES-LPCTRCQHHAFSYLTKNPLTLNNSEDFQYWTFAFHNNVNNRLNK 88 (106)
T ss_dssp HHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHH-CSCHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhCCCCccChHHHHHHHHHHHhHHHHhhCC
Confidence 58999999999999999874 45556666643 9999999999999977 4678999999999999999999999
No 8
>4e0h_A Mitochondrial FAD-linked sulfhydryl oxidase ERV1; four-helix bundle, flavin-linked sulfhydryl oxidase, FAD BIN oxidation; HET: FAD; 2.00A {Saccharomyces cerevisiae}
Probab=99.85 E-value=6.5e-22 Score=168.04 Aligned_cols=73 Identities=22% Similarity=0.504 Sum_probs=68.0
Q ss_pred cHHHHHHHHhhcCCCCCCHHHHHHHHHHhHh---ccCChHHHHHHHHHhcC---CCCChhHHHHHHHHhhhhhhhhhcc
Q 010286 315 GLWVLLHSLSVRIDDGESQFTFTAVCDFIHN---FFVCEECRQHFYQMCSS---PFNKTRDFALWLWSTHNQVNERLMK 387 (513)
Q Consensus 315 glW~l~H~ltv~~~~~~~~~~~~~~~~~v~~---ff~C~~C~~hf~~~~~~---~~~~~~~~~lWlw~~HN~VN~rl~~ 387 (513)
+.|+|||+||+++|+.|+......+++||.+ ||||++||+||.+++++ .++|++++++|||++||.||+||+|
T Consensus 10 ~~W~~lHtia~~yP~~pt~~~k~~~~~fi~~l~~~lPC~~C~~hf~~~l~~~p~~~~sr~~l~~Wl~~~HN~VN~rLgK 88 (106)
T 4e0h_A 10 SSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRK 88 (106)
T ss_dssp HHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHCCCccCCHHHHHHHHHHHHHHHHHHcCC
Confidence 3699999999999999999888888888885 79999999999999977 6899999999999999999999998
No 9
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.83 E-value=1.5e-20 Score=159.77 Aligned_cols=98 Identities=19% Similarity=0.488 Sum_probs=86.3
Q ss_pred CcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccce
Q 010286 52 NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPM 131 (513)
Q Consensus 52 ~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PT 131 (513)
|.++|++.|.++.+++++|+|||+|||||+.+.|.|+++++.+. .+.++.||+ +++++++++|+|+++||
T Consensus 7 ~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--------~~~~~~vd~--d~~~~l~~~~~V~~~PT 76 (105)
T 3zzx_A 7 DQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS--------DVVFLKVDV--DECEDIAQDNQIACMPT 76 (105)
T ss_dssp SHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TEEEEEEET--TTCHHHHHHTTCCBSSE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC--------CeEEEEEec--ccCHHHHHHcCCCeecE
Confidence 45899999988777899999999999999999999999999875 388999998 57899999999999999
Q ss_pred EEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHh
Q 010286 132 LLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (513)
Q Consensus 132 l~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~ 173 (513)
+++|++|+. +.++.| .+.++|.++|+++
T Consensus 77 ~~~~~~G~~-------------v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 77 FLFMKNGQK-------------LDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEEEETTEE-------------EEEEES-CCHHHHHHHHHHH
T ss_pred EEEEECCEE-------------EEEEeC-cCHHHHHHHHHhc
Confidence 999988743 455677 6899999999875
No 10
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.83 E-value=6.5e-20 Score=160.24 Aligned_cols=115 Identities=11% Similarity=0.190 Sum_probs=95.5
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHH
Q 010286 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (513)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~ 122 (513)
..++.|+.|++++|++.+.++ ++++||+|||+||+||+++.|.|+++++.+.... ..+.+.++.|||+ ++.++|+
T Consensus 12 ~~~~~v~~l~~~~f~~~~~~~-~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~--~~~~v~~~~vd~~--~~~~l~~ 86 (127)
T 3h79_A 12 ERPSRVVELTDETFDSIVMDP-EKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKR--NHLTFVAARIDGE--KYPDVIE 86 (127)
T ss_dssp -CCCCCEECCTTTHHHHHTCT-TCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTST--TTTTEEEEEEETT--TCHHHHH
T ss_pred CCCCceEECChhhHHHHHhCC-CCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcc--cCCCeEEEEEEcc--ccHhHHH
Confidence 345679999999999999754 4789999999999999999999999999875321 1256999999994 6899999
Q ss_pred HCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHh
Q 010286 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (513)
Q Consensus 123 ~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~ 173 (513)
+|+|+++||+++|++|... ....|.|.++.++|.+||+++
T Consensus 87 ~~~v~~~Pt~~~~~~g~~~-----------~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 87 RMRVSGFPTMRYYTRIDKQ-----------EPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp HTTCCSSSEEEEECSSCSS-----------SCEECCSCCCHHHHHHHHHHH
T ss_pred hcCCccCCEEEEEeCCCCC-----------CceEecCCccHHHHHHHHHhc
Confidence 9999999999999876321 114578999999999999875
No 11
>3u5s_A FAD-linked sulfhydryl oxidase ALR; flavin, liver, oxidoreductase; HET: FAD; 1.50A {Homo sapiens} PDB: 3mbg_A* 3tk0_A* 3o55_A* 3u2m_A* 3u2l_A* 3r7c_A* 1oqc_A*
Probab=99.82 E-value=7.5e-21 Score=165.87 Aligned_cols=73 Identities=27% Similarity=0.448 Sum_probs=68.6
Q ss_pred cHHHHHHHHhhcCCCCCCHHHHHHHHHHhHh---ccCChHHHHHHHHHhcC---CCCChhHHHHHHHHhhhhhhhhhcc
Q 010286 315 GLWVLLHSLSVRIDDGESQFTFTAVCDFIHN---FFVCEECRQHFYQMCSS---PFNKTRDFALWLWSTHNQVNERLMK 387 (513)
Q Consensus 315 glW~l~H~ltv~~~~~~~~~~~~~~~~~v~~---ff~C~~C~~hf~~~~~~---~~~~~~~~~lWlw~~HN~VN~rl~~ 387 (513)
+.|+|||+||++||+.|+......+++||.. ||||.+|++||.+++++ .++||+++++|||.+||.||+||+|
T Consensus 26 atW~~LHtia~~yP~~Pt~~~k~~~~~fi~~l~~~lPC~~C~~hf~~~l~~~pp~l~SR~~l~~Wl~~~HN~VN~rLgK 104 (126)
T 3u5s_A 26 HSWAVLHTLAAYYPDLPTPEQQQDMAQFIHLFSKFYPXEEXAEDLRKRLARNHPDTRTRAAFTQWLXHLHNEVNRKLGK 104 (126)
T ss_dssp HHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHCccccCCHHHHHHHHHHHHHHHHHHcCC
Confidence 3599999999999999999988999999887 59999999999999988 6899999999999999999999999
No 12
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.81 E-value=2.7e-19 Score=165.74 Aligned_cols=132 Identities=14% Similarity=0.255 Sum_probs=101.7
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEec-------CCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhc
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFA-------NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN 117 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA-------~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n 117 (513)
.+.|+.||+++|++.+..+++.++||.||| +|||+|+.++|+|+++|+++..... .+.|.|++||+ +++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~--~~~v~f~kvD~--d~~ 92 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAP--QSLNLFFTVDV--NEV 92 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCT--TCCEEEEEEET--TTC
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccC--CCCEEEEEEEC--ccC
Confidence 467999999999998876667889999999 4999999999999999999852110 03699999998 579
Q ss_pred HHHHHHCCCCccceEEEecCCcccC---CCCCCccccchhhhccC-cCCHHHHHHHHHHhccccCCCC
Q 010286 118 TNLCDKFSVGHYPMLLWGSPSKFVA---GSWEPNQEKKEIRALED-WQTADGLLTWINKQTSRSYGLD 181 (513)
Q Consensus 118 ~~lc~~f~I~~~PTl~~f~~g~~~~---~~~~~~~~~~~v~~~~g-~~~~e~L~~~i~~~l~~~~~l~ 181 (513)
++++++|+|+++||+++|++|.... ..+.. ..........| +++++.|.+||.++++..+.|.
T Consensus 93 ~~la~~~~I~siPtl~~F~~g~~~~~~~~~~~~-~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~ 159 (178)
T 3ga4_A 93 PQLVKDLKLQNVPHLVVYPPAESNKQSQFEWKT-SPFYQYSLVPENAENTLQFGDFLAKILNISITVP 159 (178)
T ss_dssp HHHHHHTTCCSSCEEEEECCCCGGGGGGCCTTT-SCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCC
T ss_pred HHHHHHcCCCCCCEEEEEcCCCCCCcccccccc-CCcceeecccCCCcCHHHHHHHHHHhcCCCcccc
Confidence 9999999999999999999885332 01111 00011111235 8999999999999998776554
No 13
>4e0i_A Mitochondrial FAD-linked sulfhydryl oxidase ERV1; flavin-linked sulfhydryl oxidase, MIA40, oxidation, mitochon intermembrane space; HET: FAD; 3.00A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.2e-19 Score=168.47 Aligned_cols=76 Identities=20% Similarity=0.435 Sum_probs=70.1
Q ss_pred ccccHHHHHHHHhhcCCCCCCHHHHHHHHHHhHh---ccCChHHHHHHHHHhcC---CCCChhHHHHHHHHhhhhhhhhh
Q 010286 312 FSCGLWVLLHSLSVRIDDGESQFTFTAVCDFIHN---FFVCEECRQHFYQMCSS---PFNKTRDFALWLWSTHNQVNERL 385 (513)
Q Consensus 312 y~CglW~l~H~ltv~~~~~~~~~~~~~~~~~v~~---ff~C~~C~~hf~~~~~~---~~~~~~~~~lWlw~~HN~VN~rl 385 (513)
.=-+.|+|||+|+++||+.|+......+++||.. ||||.+|++||.+++.+ .+.||+++++|||++||.||+||
T Consensus 90 lGp~~W~~LHTiA~~YP~~Pt~~~k~~~~~Fi~~l~~~lPC~~C~~hf~~~lk~~pp~l~SR~~l~~Wl~~~HN~VN~rL 169 (189)
T 4e0i_A 90 LGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWSAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKL 169 (189)
T ss_dssp HHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHCccccCCHHHHHHHHHHHHHHHHHHc
Confidence 4456899999999999999999988999999886 59999999999999877 68999999999999999999999
Q ss_pred cc
Q 010286 386 MK 387 (513)
Q Consensus 386 ~~ 387 (513)
+|
T Consensus 170 gK 171 (189)
T 4e0i_A 170 RK 171 (189)
T ss_dssp TC
T ss_pred CC
Confidence 98
No 14
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.77 E-value=2.2e-18 Score=145.83 Aligned_cols=107 Identities=17% Similarity=0.249 Sum_probs=93.5
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCC
Q 010286 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~ 125 (513)
..++.++.++|++.+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+
T Consensus 4 ~~v~~l~~~~~~~~~~~~-~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~-------~~v~~~~vd~--~~~~~l~~~~~ 73 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDE-GKACLVMFSRKNCHVCQKVTPVLEELRLNYE-------ESFGFYYVDV--EEEKTLFQRFS 73 (111)
T ss_dssp CCSEECCHHHHHHHHTTS-CCCEEEEEECSSCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--TTCHHHHHHTT
T ss_pred CcceecCHHHHHHHHHhc-CCEEEEEEeCCCChhHHHHHHHHHHHHHHcC-------CceEEEEEEC--CcChhHHHhcC
Confidence 458899999999999554 3789999999999999999999999999986 3589999998 46899999999
Q ss_pred CCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
|+++||+++|++|+ .+..+.|..+.++|.++|++.++
T Consensus 74 v~~~Pt~~~~~~g~-------------~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 74 LKGVPQILYFKDGE-------------YKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp CCSSCEEEEEETTE-------------EEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCcCCEEEEEECCE-------------EEEEEeccCCHHHHHHHHHHHhc
Confidence 99999999998774 33567889999999999998764
No 15
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.77 E-value=1.2e-18 Score=154.19 Aligned_cols=106 Identities=15% Similarity=0.244 Sum_probs=93.2
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCC--HHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWC--PACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WC--g~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
.....+++++|++.+.++ ++++||+|||+|| |+|+.++|.+++++++|. +.+.|++||. |+|++++.+
T Consensus 15 ~g~~~vt~~~F~~~v~~~-~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~-------~~v~~~KVdv--De~~~la~~ 84 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHS-GKIVVLFFRGDAVRFPEAADLAVVLPELINAFP-------GRLVAAEVAA--EAERGLMAR 84 (137)
T ss_dssp --CEEECTTTHHHHHHTS-SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTST-------TTEEEEEECG--GGHHHHHHH
T ss_pred cCCcccCHhHHHHHHhcC-CCcEEEEEeCCccCCCchhhHHhHHHHHHHHcc-------CCcEEEEEEC--CCCHHHHHH
Confidence 345688999999999764 3589999999999 999999999999999986 4699999996 679999999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
|+|+++||+++|++|+. +.++.|..+.++|.++|++++
T Consensus 85 ygV~siPTlilFkdG~~-------------v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 85 FGVAVCPSLAVVQPERT-------------LGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp HTCCSSSEEEEEECCEE-------------EEEEESCCCHHHHHHHHHHHH
T ss_pred cCCccCCEEEEEECCEE-------------EEEEeCCCCHHHHHHHHHHHh
Confidence 99999999999999844 456789999999999999877
No 16
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.76 E-value=3.4e-18 Score=144.50 Aligned_cols=107 Identities=25% Similarity=0.512 Sum_probs=92.1
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
.+.++.+++++|++.+. ++++||+||++||++|+.+.|.++++++.+.... ..+.++.||++ ++.+++++|
T Consensus 4 ~~~v~~l~~~~~~~~~~---~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~----~~~~~~~vd~~--~~~~l~~~~ 74 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA---EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGL----AGVKIAEVDCT--AERNICSKY 74 (111)
T ss_dssp -CCSEECCTTTHHHHHH---SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-----CCEEEEEEETT--TCHHHHHHT
T ss_pred CCcceEcChhhHHHHhc---CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccC----CceEEEEEecc--ccHhHHHhc
Confidence 34689999999999998 3689999999999999999999999999875432 35999999984 688999999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHh
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~ 173 (513)
+|+++||+++|++|+ .+..+.|..+.++|.+||+++
T Consensus 75 ~v~~~Pt~~~~~~g~-------------~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 75 SVRGYPTLLLFRGGK-------------KVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp TCCSSSEEEEEETTE-------------EEEEECSCCSHHHHHHHHHHH
T ss_pred CCCcccEEEEEeCCc-------------EEEeccCCcCHHHHHHHHHhc
Confidence 999999999998774 345678999999999999875
No 17
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.76 E-value=1.3e-18 Score=156.52 Aligned_cols=113 Identities=11% Similarity=0.085 Sum_probs=90.8
Q ss_pred ceecC-cccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCC
Q 010286 48 AVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (513)
Q Consensus 48 v~~L~-~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I 126 (513)
+..|+ .++|++.+.+..++++||+|||+|||+|+.++|.++++|+++. +.+.|++||. |++++++.+|+|
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~-------~~v~f~kVDV--De~~e~a~~y~V 93 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIK-------NFCVIYLVDI--TEVPDFNTMYEL 93 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHT-------TTEEEEEEET--TTCCTTTTTTTC
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHcc-------CCcEEEEEEC--CCCHHHHHHcCC
Confidence 44554 4899998865345899999999999999999999999999996 3589999997 579999999999
Q ss_pred CccceEEEecCCccc--CCCCCCccccchhhhccCcCC-HHHHHHHHHHhcc
Q 010286 127 GHYPMLLWGSPSKFV--AGSWEPNQEKKEIRALEDWQT-ADGLLTWINKQTS 175 (513)
Q Consensus 127 ~~~PTl~~f~~g~~~--~~~~~~~~~~~~v~~~~g~~~-~e~L~~~i~~~l~ 175 (513)
+++||+++|++|+.. .-+. .....+.|..+ .++|.++|++.+.
T Consensus 94 ~siPT~~fFk~G~~v~vd~Gt------gd~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 94 YDPVSVMFFYRNKHMMIDLGT------GNNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp CSSEEEEEEETTEEEEEECSS------SCCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCEEEEEecCC------CCcCeEEeecCCHHHHHHHHHHHHH
Confidence 999999999988653 1000 01125678776 9999999988764
No 18
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.76 E-value=4.1e-18 Score=143.57 Aligned_cols=106 Identities=18% Similarity=0.399 Sum_probs=91.9
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCC
Q 010286 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~ 125 (513)
+.++.++.++|+..+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++|+
T Consensus 2 ~~v~~l~~~~f~~~~~~~-~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~~--~~~~~~~~~~ 71 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKA-DGAILVDFWAEWCGPCKMIAPILDEIADEYQ-------GKLTVAKLNID--QNPGTAPKYG 71 (108)
T ss_dssp TTEEECCTTTHHHHTTTC-SSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEETT--TCTTHHHHTT
T ss_pred CcceecchhhHHHHHHhc-CCeEEEEEECCCCHhHHHHHHHHHHHHHHhC-------CCcEEEEEECC--CCHHHHHHcC
Confidence 468899999999877543 5789999999999999999999999999986 35999999984 5788999999
Q ss_pred CCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
|.++||+++|++|+. +..+.|..+.++|.++|++.+
T Consensus 72 v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 72 IRGIPTLLLFKNGEV-------------AATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp CCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHH
T ss_pred CcccCEEEEEeCCEE-------------EEEEecCCCHHHHHHHHHHhh
Confidence 999999999987743 345788899999999998875
No 19
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.75 E-value=3.3e-18 Score=145.93 Aligned_cols=106 Identities=18% Similarity=0.344 Sum_probs=92.4
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCC
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I 126 (513)
.++.+++++|++.+ .+++++|.||++||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++|+|
T Consensus 2 ~v~~l~~~~~~~~~---~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-------~~v~~~~vd~~--~~~~l~~~~~v 69 (112)
T 2voc_A 2 AIVKATDQSFSAET---SEGVVLADFWAPWCGPSKMIAPVLEELDQEMG-------DKLKIVKIDVD--ENQETAGKYGV 69 (112)
T ss_dssp CCEECCTTTHHHHH---SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHT-------TTCEEEEEETT--TCCSHHHHTTC
T ss_pred CeEEecHHHHHHHh---CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC-------CCcEEEEEECC--CCHHHHHHcCC
Confidence 36789999999999 35889999999999999999999999999986 34899999984 57889999999
Q ss_pred CccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcccc
Q 010286 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 127 ~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~ 177 (513)
.++||+++|++|+. +..+.|..+.++|.+|+++++++.
T Consensus 70 ~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 70 MSIPTLLVLKDGEV-------------VETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp CSBSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHTTSCSC
T ss_pred CcccEEEEEeCCEE-------------EEEEeCCCCHHHHHHHHHHHHHhh
Confidence 99999999987743 356789999999999999887653
No 20
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.75 E-value=6.6e-18 Score=142.08 Aligned_cols=106 Identities=30% Similarity=0.524 Sum_probs=93.5
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
.+.++.+++++|++.+.+ +++++|+||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|
T Consensus 3 ~~~v~~l~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~ 71 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRN--NKLVLVDCWAEWCAPCHLYEPIYKKVAEKYK-------GKAVFGRLNV--DENQKIADKY 71 (109)
T ss_dssp CCCCEECCTTTHHHHHHH--SSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--TTCHHHHHHT
T ss_pred CCeEEEecHHHHHHHHhc--CCeEEEEEECCCCHHHHhhhHHHHHHHHHhC-------CCceEEEEcc--ccCHHHHHhc
Confidence 456889999999999977 4889999999999999999999999999986 3589999998 4689999999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+|.++||+++|++|+ .+..+.|..+.++|.++|++.+
T Consensus 72 ~i~~~Pt~~~~~~g~-------------~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 72 SVLNIPTTLIFVNGQ-------------LVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp TCCSSSEEEEEETTE-------------EEEEEESCCCHHHHHHHHHHHC
T ss_pred CcccCCEEEEEcCCc-------------EEEeeeccCCHHHHHHHHHHHh
Confidence 999999999998774 3356789999999999998875
No 21
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.75 E-value=2.3e-18 Score=148.17 Aligned_cols=106 Identities=17% Similarity=0.292 Sum_probs=90.7
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
.......+.++|++.+.+..++++||+|||+||++|+.+.|.++++++.+. + +.|+.||+ +++.+++++|
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-------~-v~~~~vd~--d~~~~l~~~~ 80 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS-------N-VIFLEVDV--DDCQDVASEC 80 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT-------T-SEEEEEET--TTTHHHHHHT
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-------C-CEEEEEEC--CCCHHHHHHc
Confidence 345677889999999986556899999999999999999999999999875 3 89999998 4689999999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+|+++||+++|++|+. +..+.|. +.++|.++|++.+
T Consensus 81 ~v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 81 EVKSMPTFQFFKKGQK-------------VGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp TCCSSSEEEEESSSSE-------------EEEEESC-CHHHHHHHHHHHC
T ss_pred CCccccEEEEEeCCeE-------------EEEEcCC-CHHHHHHHHHHhC
Confidence 9999999999987743 3457787 9999999998764
No 22
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.75 E-value=5.9e-18 Score=141.79 Aligned_cols=104 Identities=20% Similarity=0.376 Sum_probs=91.0
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCC
Q 010286 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~ 125 (513)
..++.++.++|++.+ .+++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+
T Consensus 3 ~~v~~l~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~ 70 (106)
T 3die_A 3 MAIVKVTDADFDSKV---ESGVQLVDFWATACGPCKMIAPVLEELAADYE-------GKADILKLDV--DENPSTAAKYE 70 (106)
T ss_dssp CCCEECCTTTHHHHS---CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCHHHHHHTT
T ss_pred cceEECCHHHHHHHh---cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCcEEEEEEC--CcCHHHHHhCC
Confidence 358899999999999 35889999999999999999999999999986 3489999998 46899999999
Q ss_pred CCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
|+++||+++|++|+ .+..+.|..+.++|.++|++.+
T Consensus 71 v~~~Pt~~~~~~G~-------------~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 71 VMSIPTLIVFKDGQ-------------PVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp CCSBSEEEEEETTE-------------EEEEEESCCCHHHHHHHHHTTC
T ss_pred CcccCEEEEEeCCe-------------EEEEEeCCCCHHHHHHHHHHhC
Confidence 99999999998774 3356789999999999998753
No 23
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.75 E-value=4e-18 Score=171.45 Aligned_cols=129 Identities=22% Similarity=0.436 Sum_probs=103.2
Q ss_pred ccccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHH
Q 010286 42 KVEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC 121 (513)
Q Consensus 42 p~~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc 121 (513)
+.....|++|+.++|++.+.+. ++++||+|||+||++|++++|.|+++++.+. +.+.++.|||+.+++.++|
T Consensus 13 ~~~~~~vv~lt~~~f~~~i~~~-~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~-------~~~~~~~v~~d~~~~~~l~ 84 (298)
T 3ed3_A 13 YDSDPHISELTPKSFDKAIHNT-NYTSLVEFYAPWCGHCKKLSSTFRKAAKRLD-------GVVQVAAVNCDLNKNKALC 84 (298)
T ss_dssp CSSCTTCEECCHHHHHHHHTSS-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEETTSTTTHHHH
T ss_pred CCCCCCeEEeCHHHHHHHHHhC-CCeEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CCcEEEEEEccCccCHHHH
Confidence 3556789999999999999654 4789999999999999999999999999986 3488999999766789999
Q ss_pred HHCCCCccceEEEecCCcccCCCCC--C--ccccchhhhccCcCCHHHHHHHHHHhccccC
Q 010286 122 DKFSVGHYPMLLWGSPSKFVAGSWE--P--NQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (513)
Q Consensus 122 ~~f~I~~~PTl~~f~~g~~~~~~~~--~--~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~~ 178 (513)
++|+|+++||+++|.+|++...... + ...+.....|.|.++.+.|++|+.++++..+
T Consensus 85 ~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v 145 (298)
T 3ed3_A 85 AKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYV 145 (298)
T ss_dssp HHTTCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCE
T ss_pred HhCCCCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhccccc
Confidence 9999999999999998864221000 0 0001234678999999999999999987654
No 24
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=7.9e-18 Score=148.92 Aligned_cols=113 Identities=24% Similarity=0.502 Sum_probs=97.1
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
..+.++.|+.++|++.+.+ ++++||+||++||++|+.+.|.|+++++.+.+.+ ..+.++.|||+ ++.+++++
T Consensus 15 ~~~~v~~l~~~~~~~~~~~--~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~----~~v~~~~vd~~--~~~~~~~~ 86 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFVAD--KDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDND----PPIAVAKIDAT--SASMLASK 86 (140)
T ss_dssp EETTEEECCTTTHHHHHTT--CSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSS----SCCEEEEECTT--TCHHHHHH
T ss_pred CCCCCEEcChHhHHHHHhc--CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccC----CceEEEEEeCc--ccHHHHHH
Confidence 3457899999999998875 4789999999999999999999999999997432 24899999984 67899999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccccC
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~~ 178 (513)
|+|+++||+++|++|+ +..+.|.++.++|.+||++.++...
T Consensus 87 ~~v~~~Pt~~~~~~G~--------------~~~~~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 87 FDVSGYPTIKILKKGQ--------------AVDYDGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp TTCCSSSEEEEEETTE--------------EEECCSCCCHHHHHHHHHHHHSSSC
T ss_pred CCCCccCeEEEEECCc--------------EEEcCCCCCHHHHHHHHHHhcCCCC
Confidence 9999999999998763 2457889999999999999987543
No 25
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.75 E-value=1.6e-18 Score=153.94 Aligned_cols=105 Identities=13% Similarity=0.142 Sum_probs=93.5
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCC--CHHHhhhhHHHHHHHHHhCCCCCCCCCe-EEEEEEeccchhcHHHHHH
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANW--CPACRNYKPQYEKVARLFNGPNAAHPGI-ILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~W--Cg~Ck~~~P~~~~lA~~~~~~~~~~~~~-v~~~~VDc~~d~n~~lc~~ 123 (513)
.+..+++++|++.+.. ++++||+|||+| ||+|+.++|.+++++++|. +. +.|++||. |+|++++.+
T Consensus 18 g~~~~t~~~F~~~v~~--~~~vlVdF~a~~crCgpCk~iaPvleela~e~~-------g~~v~~~KVdv--De~~~lA~~ 86 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQ--APDGVVLLSSDPKRTPEVSDNPVMIGELLHEFP-------DYTWQVAIADL--EQSEAIGDR 86 (140)
T ss_dssp TCEECCHHHHHHHHHT--CSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCT-------TSCCEEEECCH--HHHHHHHHH
T ss_pred CCccCCHHHHHHHHhC--CCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcC-------CCeEEEEEEEC--CCCHHHHHH
Confidence 4678999999999963 467999999999 9999999999999999986 56 99999996 679999999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
|+|+++||+++|++|+. +.++.|..+.+.|.++|++.+.
T Consensus 87 ygV~sIPTlilFk~G~~-------------v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 87 FGAFRFPATLVFTGGNY-------------RGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp HTCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCccCCEEEEEECCEE-------------EEEEecCCCHHHHHHHHHHHhc
Confidence 99999999999999854 4567899999999999998874
No 26
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=9.1e-18 Score=146.60 Aligned_cols=111 Identities=19% Similarity=0.399 Sum_probs=95.0
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHH
Q 010286 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (513)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~ 122 (513)
...+.++.|+.++|++.+.+. ++++||+||++||++|+.+.|.++++++.+. +.+.++.||+ +++.++++
T Consensus 14 ~~~~~v~~l~~~~f~~~~~~~-~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~-------~~~~~~~vd~--~~~~~l~~ 83 (130)
T 2dml_A 14 SSSDDVIELTPSNFNREVIQS-DGLWLVEFYAPWCGHCQRLTPEWKKAATALK-------DVVKVGAVNA--DKHQSLGG 83 (130)
T ss_dssp CTTSSSEECCTTTHHHHTTTC-SSCEEEEEECTTCSTTGGGHHHHHHHHHHTT-------TTSEEEEEET--TTCHHHHH
T ss_pred CCCCCcEECCHHHHHHHHhcC-CCeEEEEEECCCCHHHHhhCHHHHHHHHHhc-------CceEEEEEeC--CCCHHHHH
Confidence 345679999999999987654 5789999999999999999999999999986 3489999998 46889999
Q ss_pred HCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 123 ~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+|+|+++||+++|.+|.. .+..+.|.++.++|.+||.+.+.
T Consensus 84 ~~~v~~~Pt~~~~~~~~~------------~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 84 QYGVQGFPTIKIFGANKN------------KPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp HHTCCSSSEEEEESSCTT------------SCEECCSCCSHHHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEeCCCC------------eEEEeecCCCHHHHHHHHHHHHh
Confidence 999999999999987631 13567899999999999998874
No 27
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.74 E-value=1e-17 Score=142.28 Aligned_cols=107 Identities=21% Similarity=0.423 Sum_probs=91.1
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
...++.++.++|++.+.+..+++++|.||++||++|+.+.|.++++++.+. .+.++.||++ +.+.+++++|
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--------~v~~~~vd~~-~~~~~~~~~~ 74 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--------DVIFLKLDCN-QENKTLAKEL 74 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECS-STTHHHHHHH
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--------CeEEEEEecC-cchHHHHHHc
Confidence 456899999999999987557889999999999999999999999999985 2889999985 3678999999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+|+++||++++++|+. +..+.|. +.++|.++|++.+
T Consensus 75 ~v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 75 GIRVVPTFKILKENSV-------------VGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp CCSBSSEEEEESSSSE-------------EEEEESS-CHHHHHHHHHHHH
T ss_pred CCCeeeEEEEEeCCcE-------------EEEEcCC-CHHHHHHHHHHhh
Confidence 9999999999888743 2345676 4889999998764
No 28
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.74 E-value=2.7e-18 Score=146.91 Aligned_cols=116 Identities=27% Similarity=0.562 Sum_probs=97.1
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHH
Q 010286 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (513)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~ 122 (513)
...+.++.++.++|++.+.+ +++++|.||++||++|+.+.|.++++++.+.+.+ ..+.++.|||+ ++.++++
T Consensus 4 ~~~~~v~~l~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~----~~v~~~~vd~~--~~~~~~~ 75 (120)
T 1mek_A 4 EEEDHVLVLRKSNFAEALAA--HKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEG----SEIRLAKVDAT--EESDLAQ 75 (120)
T ss_dssp CEETTEEECCTTTHHHHHHH--CSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTC----CCCBCEEEETT--TCCSSHH
T ss_pred cCCCCcEEechhhHHHHHcc--CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccC----CcEEEEEEcCC--CCHHHHH
Confidence 44567999999999998876 4789999999999999999999999999987532 35899999984 5678999
Q ss_pred HCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcccc
Q 010286 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 123 ~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~ 177 (513)
+|+|+++||+++|++|+... ...+.|.++.++|.+||++.++..
T Consensus 76 ~~~v~~~Pt~~~~~~g~~~~-----------~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 76 QYGVRGYPTIKFFRNGDTAS-----------PKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp HHTCCSSSEEEEEESSCSSS-----------CEECCCCSSHHHHHHHHHTTSCCC
T ss_pred HCCCCcccEEEEEeCCCcCC-----------cccccCccCHHHHHHHHHhccCCC
Confidence 99999999999998774321 145778899999999999887653
No 29
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.74 E-value=1.2e-17 Score=149.62 Aligned_cols=110 Identities=23% Similarity=0.475 Sum_probs=96.2
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHH
Q 010286 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (513)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~ 122 (513)
.....++.++.++|++.+.. ++++||+||++||++|+.+.|.|+++++.+. +.+.++.||+ +++.++++
T Consensus 35 ~~~~~v~~l~~~~~~~~~~~--~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-------~~~~~~~vd~--~~~~~l~~ 103 (148)
T 3p2a_A 35 LFDGEVINATAETLDKLLQD--DLPMVIDFWAPWCGPCRSFAPIFAETAAERA-------GKVRFVKVNT--EAEPALST 103 (148)
T ss_dssp TTCCCCEECCTTTHHHHTTC--SSCEEEEEECSSCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCHHHHH
T ss_pred cccCCceecCHHHHHHHHhc--CCcEEEEEECCCCHHHHHHHHHHHHHHHHcC-------CceEEEEEEC--cCCHHHHH
Confidence 34567999999999999933 5889999999999999999999999999986 3489999998 46899999
Q ss_pred HCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 123 ~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
+|+|+++||+++|++|+ .+..+.|.++.++|.+||++.++.
T Consensus 104 ~~~v~~~Pt~~~~~~G~-------------~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 104 RFRIRSIPTIMLYRNGK-------------MIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp HTTCCSSSEEEEEETTE-------------EEEEESSCCCHHHHHHHHHHHHHS
T ss_pred HCCCCccCEEEEEECCe-------------EEEEEeCCCCHHHHHHHHHHHhcc
Confidence 99999999999998774 345678999999999999998864
No 30
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.74 E-value=1.2e-17 Score=162.51 Aligned_cols=121 Identities=17% Similarity=0.347 Sum_probs=100.6
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHH
Q 010286 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (513)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~ 122 (513)
...+.|..|++++|++.+.++ +++++|+|||+||++|+++.|.|+++++.+.+++ ..+.++.|||+.+++.++|+
T Consensus 9 ~~~~~v~~l~~~~f~~~i~~~-~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~----~~v~~~~vd~~~~~~~~l~~ 83 (244)
T 3q6o_A 9 SPSDPLTLLQADTVRGAVLGS-RSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWR----PALYLAALDCAEETNSAVCR 83 (244)
T ss_dssp CTTSSSEEECTTTHHHHHSSC-SSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGT----TTEEEEEEETTSTTTHHHHH
T ss_pred CCCCCceeCChhhHHHHHhhC-CCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhcc----CcEEEEEEeCCchhhHHHHH
Confidence 346779999999999999775 4789999999999999999999999999997532 36999999998778999999
Q ss_pred HCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcccc
Q 010286 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 123 ~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~ 177 (513)
+|+|+++||+++|.+|+.... +..+ .+.| ++.+.|.++|.+.+...
T Consensus 84 ~~~v~~~Pt~~~~~~g~~~~~-------g~~~-~~~g-~~~~~l~~~i~~~l~~~ 129 (244)
T 3q6o_A 84 DFNIPGFPTVRFFXAFTXNGS-------GAVF-PVAG-ADVQTLRERLIDALESH 129 (244)
T ss_dssp HTTCCSSSEEEEECTTCCSSS-------CEEC-CCTT-CCHHHHHHHHHHHHHTC
T ss_pred HcCCCccCEEEEEeCCCcCCC-------CeeE-ecCC-CCHHHHHHHHHHHHHhc
Confidence 999999999999987643321 1222 4555 79999999999988653
No 31
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.74 E-value=1.6e-17 Score=139.39 Aligned_cols=105 Identities=20% Similarity=0.467 Sum_probs=91.0
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCC
Q 010286 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~ 125 (513)
+.++.+++++|++.+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++|+
T Consensus 2 ~~v~~l~~~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~~--~~~~~~~~~~ 71 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKA-SGLVLVDFWAEWCGPCKMIGPALGEIGKEFA-------GKVTVAKVNID--DNPETPNAYQ 71 (107)
T ss_dssp CCEEECCTTTHHHHTTTC-SSEEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TSEEEEEEETT--TCCHHHHHTT
T ss_pred CceeecchhhhhHHHHhC-CCEEEEEEECCCChhHHHHhHHHHHHHHHhC-------CcEEEEEEECC--CCHHHHHhcC
Confidence 458899999999887543 5789999999999999999999999999986 35999999984 5789999999
Q ss_pred CCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHh
Q 010286 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (513)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~ 173 (513)
|.++||+++|++|+. +..+.|..+.++|.++|++.
T Consensus 72 v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 72 VRSIPTLMLVRDGKV-------------IDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp CCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHT
T ss_pred CCccCEEEEEeCCEE-------------EEEecCCCCHHHHHHHHHhc
Confidence 999999999987743 34577889999999999875
No 32
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.74 E-value=1.1e-17 Score=151.89 Aligned_cols=109 Identities=15% Similarity=0.361 Sum_probs=94.1
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
....++.+++++|++.+. .++++||+|||+||++|+.+.|.|+++++.+. +.+.|+.||+ +++++++++
T Consensus 45 ~~~~~~~l~~~~f~~~~~--~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~-------~~v~~~~vd~--~~~~~l~~~ 113 (155)
T 2ppt_A 45 ITGKVAGIDPAILARAER--DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLA-------GQVRLAKIDT--QAHPAVAGR 113 (155)
T ss_dssp CCSSEEECCHHHHHHHTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTCEEEEEET--TTSTHHHHH
T ss_pred cCCCCccCCHHHHHHHHh--CCCcEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CCEEEEEEeC--CccHHHHHH
Confidence 345688999999999983 35789999999999999999999999999996 3489999998 467899999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
|+|+++||+++|++|+. +..+.|..+.++|.+||++.++.
T Consensus 114 ~~i~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 114 HRIQGIPAFILFHKGRE-------------LARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp TTCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHC-
T ss_pred cCCCcCCEEEEEeCCeE-------------EEEecCCCCHHHHHHHHHHHhcc
Confidence 99999999999987743 35678899999999999998764
No 33
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=1.2e-17 Score=146.13 Aligned_cols=114 Identities=20% Similarity=0.408 Sum_probs=96.0
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
..+.++.++.++|++.+.+. ++++||+|||+||++|+.+.|.++++++.+.+.. .+.+.++.|||+ ++.+++++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~-~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~---~~~~~~~~vd~~--~~~~l~~~ 78 (133)
T 1x5d_A 5 SSGDVIELTDDSFDKNVLDS-EDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQT---KGKVKLAAVDAT--VNQVLASR 78 (133)
T ss_dssp SCCSCEECCTTHHHHHTTTS-SSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHT---TTSEEEEEEETT--TCCHHHHH
T ss_pred CCCcCEEcCHhhHHHHHhcC-CCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhc---CCcEEEEEEECC--CCHHHHHh
Confidence 34568999999999988654 4789999999999999999999999999985100 024999999984 57899999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
|+|+++||+++|.+|+ .+..+.|.++.++|.+||++.+..
T Consensus 79 ~~v~~~Pt~~~~~~g~-------------~~~~~~G~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 79 YGIRGFPTIKIFQKGE-------------SPVDYDGGRTRSDIVSRALDLFSD 118 (133)
T ss_dssp HTCCSSSEEEEEETTE-------------EEEEECSCCSHHHHHHHHHHHHHH
T ss_pred CCCCeeCeEEEEeCCC-------------ceEEecCCCCHHHHHHHHHHHhhc
Confidence 9999999999998773 335678999999999999998864
No 34
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.73 E-value=1.3e-17 Score=147.93 Aligned_cols=111 Identities=19% Similarity=0.382 Sum_probs=92.3
Q ss_pred cccCcceecCcccHHHHHhcC----------CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEec
Q 010286 43 VEVDHAVELNATNFDAVLRDT----------PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC 112 (513)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~----------~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc 112 (513)
.....++.++.++|+..+.+. .++++||+||++||++|+.+.|.++++++.+. +.+.++.||+
T Consensus 19 ~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~ 91 (141)
T 3hxs_A 19 KPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYA-------GKIYIYKVNV 91 (141)
T ss_dssp ----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTT-------TTCEEEEEET
T ss_pred CCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CceEEEEEEC
Confidence 345679999999999998763 25889999999999999999999999999986 3589999998
Q ss_pred cchhcHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 113 ALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 113 ~~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+++.+++++|+|+++||+++|.++. . +..+.|..+.++|.++|++.+.
T Consensus 92 --~~~~~~~~~~~v~~~Pt~~~~~~~g------------~-~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 92 --DKEPELARDFGIQSIPTIWFVPMKG------------E-PQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp --TTCHHHHHHTTCCSSSEEEEECSSS------------C-CEEEESCCCHHHHHHHHHHTTC
T ss_pred --CCCHHHHHHcCCCCcCEEEEEeCCC------------C-EEEEeCCCCHHHHHHHHHHHHc
Confidence 4689999999999999999985431 1 2357889999999999998774
No 35
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.73 E-value=1.6e-17 Score=143.43 Aligned_cols=109 Identities=22% Similarity=0.391 Sum_probs=93.8
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
..+.++.+++++|++.+.+. ++++||.||++||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~-~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~vd~d--~~~~l~~~ 80 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNS-ETPVVVDFHAQWCGPCKILGPRLEKMVAKQH-------GKVVMAKVDID--DHTDLAIE 80 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TSSEEEEEETT--TTHHHHHH
T ss_pred CceEEEecChhhHHHHHHcC-CCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEeCC--CCHHHHHH
Confidence 34678999999999988764 5789999999999999999999999999985 34899999984 67899999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
|+|.++||+++|++|+. +..+.|..+.++|.++|++.++
T Consensus 81 ~~v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 81 YEVSAVPTVLAMKNGDV-------------VDKFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp TTCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCCcccEEEEEeCCcE-------------EEEEcCCCCHHHHHHHHHHHhC
Confidence 99999999999977743 3457788899999999988763
No 36
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.73 E-value=2.1e-17 Score=140.57 Aligned_cols=108 Identities=17% Similarity=0.375 Sum_probs=93.3
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
.+.++.++.++|++.+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||++ .+.+++++|
T Consensus 6 ~~~v~~l~~~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~~--~~~~~~~~~ 75 (115)
T 1thx_A 6 SKGVITITDAEFESEVLKA-EQPVLVYFWASWCGPCQLMSPLINLAANTYS-------DRLKVVKLEID--PNPTTVKKY 75 (115)
T ss_dssp CCSEEECCGGGHHHHTTTC-SSCEEEEEECTTCTTHHHHHHHHHHHHHHTT-------TTCEEEEEEST--TCHHHHHHT
T ss_pred cCceEEeeccchhhHhhcC-CceEEEEEECCCCHHHHHhHHHHHHHHHHhC-------CcEEEEEEEcC--CCHHHHHHc
Confidence 3458999999999887543 5789999999999999999999999999986 34899999984 688999999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+|.++||+++|++|+. +..+.|..+.++|.++|++.++
T Consensus 76 ~v~~~Pt~~~~~~G~~-------------~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 76 KVEGVPALRLVKGEQI-------------LDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp TCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHC
T ss_pred CCCceeEEEEEcCCEE-------------EEEecCCCCHHHHHHHHHHHhc
Confidence 9999999999987743 3457788999999999998875
No 37
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.73 E-value=1.3e-17 Score=139.83 Aligned_cols=103 Identities=19% Similarity=0.412 Sum_probs=88.2
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCC
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~ 127 (513)
++.+++++|+..+.+ +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+|.
T Consensus 2 v~~l~~~~~~~~~~~--~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~--~~~~~~~~~~~v~ 70 (105)
T 1nsw_A 2 TMTLTDANFQQAIQG--DGPVLVDFWAAWCGPCRMMAPVLEEFAEAHA-------DKVTVAKLNV--DENPETTSQFGIM 70 (105)
T ss_dssp CEEECTTTHHHHHSS--SSCEEEEEECTTCHHHHHHHHHHHHHHHHST-------TTCEEEEEET--TTCHHHHHHTTCC
T ss_pred ceeccHHhHHHHHhC--CCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCcEEEEEEC--cCCHHHHHHcCCc
Confidence 678999999976655 3789999999999999999999999999986 3489999998 4688999999999
Q ss_pred ccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
++||+++|++|+. +..+.|..+.++|.++|++.+
T Consensus 71 ~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 71 SIPTLILFKGGRP-------------VKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp SSSEEEEEETTEE-------------EEEEESCCCHHHHHHHTTTTT
T ss_pred cccEEEEEeCCeE-------------EEEEecCCCHHHHHHHHHHHh
Confidence 9999999987743 345778899999999987654
No 38
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.73 E-value=1e-17 Score=149.09 Aligned_cols=109 Identities=16% Similarity=0.291 Sum_probs=94.9
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
.+.+..+++++|++.+.+. ++++||+||++||++|+.+.|.|+++++.+. +.+.++.||+ +++.+++++|
T Consensus 5 ~~~v~~l~~~~f~~~~~~~-~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~--~~~~~l~~~~ 74 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDS-KKPVVVMFYSPACPYCKAMEPYFEEYAKEYG-------SSAVFGRINI--ATNPWTAEKY 74 (140)
T ss_dssp TTTEEEECHHHHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTSEEEEEET--TTCHHHHHHH
T ss_pred CcceEEcchHhHHHHHHhC-CCcEEEEEECCCChhHHHHHHHHHHHHHHhC-------CceEEEEEEC--CcCHhHHHHC
Confidence 4568999999999766654 5789999999999999999999999999996 3489999998 4689999999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
+|+++||+++|++|+ .+..+.|..+.++|.++|++.+..
T Consensus 75 ~v~~~Pt~~~~~~G~-------------~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 75 GVQGTPTFKFFCHGR-------------PVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp TCCEESEEEEEETTE-------------EEEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcCCEEEEEeCCc-------------EEEEEcCCCCHHHHHHHHHHHhcc
Confidence 999999999998774 345678999999999999988753
No 39
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.73 E-value=1.1e-17 Score=166.41 Aligned_cols=109 Identities=17% Similarity=0.394 Sum_probs=96.4
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
.+.|+.++.++|++.+..++++++||+|||+|||||+.+.|.|+++++++. +.+.|+.|||+ ++++++++|
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~-------~~~~~~~vd~~--~~~~~~~~~ 76 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYN-------GQFILAKLDCD--AEQMIAAQF 76 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHT-------SSSEEEEEETT--TCHHHHHTT
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcC-------CCeEEEEEeCc--cCHHHHHHc
Confidence 456899999999998877667899999999999999999999999999996 35899999984 689999999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+|+++||+++|++|+ .+..+.|..+.+.+..+|...++
T Consensus 77 ~v~~~Pt~~~~~~G~-------------~~~~~~g~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 77 GLRAIPTVYLFQNGQ-------------PVDGFQGPQPEEAIRALLDXVLP 114 (287)
T ss_dssp TCCSSSEEEEEETTE-------------EEEEEESCCCHHHHHHHHHHHSC
T ss_pred CCCCCCeEEEEECCE-------------EEEEeeCCCCHHHHHHHHHHHcC
Confidence 999999999998774 34567889999999999988763
No 40
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.73 E-value=2.2e-17 Score=139.21 Aligned_cols=104 Identities=16% Similarity=0.252 Sum_probs=85.9
Q ss_pred ceec-CcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCC
Q 010286 48 AVEL-NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (513)
Q Consensus 48 v~~L-~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I 126 (513)
++.+ +.++|++.+.+..+++++|.|||+||++|+.+.|.++++++.+. .+.++.||+ +++.+++++|+|
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--------~~~~~~vd~--~~~~~~~~~~~v 72 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--------QAVFLEVDV--HQCQGTAATNNI 72 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTSHHHHHHTTC
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--------CcEEEEEEC--ccCHHHHHhcCC
Confidence 3444 67999999965446889999999999999999999999999983 389999998 468899999999
Q ss_pred CccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 127 ~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+++||+++|++|+. +..+.| .+.++|.++|++.+|
T Consensus 73 ~~~Pt~~~~~~G~~-------------~~~~~G-~~~~~l~~~l~~~lg 107 (107)
T 1gh2_A 73 SATPTFQFFRNKVR-------------IDQYQG-ADAVGLEEKIKQHLE 107 (107)
T ss_dssp CSSSEEEEEETTEE-------------EEEEES-SCHHHHHHHHHHHHC
T ss_pred CcccEEEEEECCeE-------------EEEEeC-CCHHHHHHHHHHhcC
Confidence 99999999987743 345667 445669999988764
No 41
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.73 E-value=2.1e-17 Score=140.35 Aligned_cols=106 Identities=16% Similarity=0.328 Sum_probs=91.7
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCC
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I 126 (513)
.++.+++++|++.+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+|
T Consensus 6 ~v~~l~~~~~~~~~~~~-~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~v 75 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKN-DKPVLVDFWAAWCGPCRQIAPSLEAIAAEYG-------DKIEIVKLNI--DENPGTAAKYGV 75 (112)
T ss_dssp CCEEECTTTHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCHHHHHHTTC
T ss_pred eEEecchhhHHHHHhhC-CCeEEEEEECCCCHhHHhcCHHHHHHHHHhc-------CCeEEEEEEc--CCCHHHHHhCCC
Confidence 47899999999887654 5789999999999999999999999999985 3489999998 468899999999
Q ss_pred CccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 127 ~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
.++||+++|++|+. +..+.|..+.++|.++|++.+.
T Consensus 76 ~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 76 MSIPTLNVYQGGEV-------------AKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp CSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHTHHHHC
T ss_pred CcccEEEEEeCCEE-------------EEEEeCCCCHHHHHHHHHHHhh
Confidence 99999999987743 3457888999999999988763
No 42
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.72 E-value=2.6e-17 Score=138.26 Aligned_cols=106 Identities=24% Similarity=0.474 Sum_probs=90.9
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCC
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I 126 (513)
.++.++.++|++.+.. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +.+.+++++|+|
T Consensus 2 ~v~~l~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~v 70 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQ--HPLVLVDFWAEWCAPCRMIAPILEEIAKEYE-------GKLLVAKLDV--DENPKTAMRYRV 70 (109)
T ss_dssp CCEECCTTTHHHHHHH--CSEEEEEEECTTCHHHHHHHHHHHHHHHHTB-------TTBEEEEEET--TTCHHHHHHTTC
T ss_pred cceEccHhHHHHHhcC--CCeEEEEEECCCCHHHHHhhHHHHHHHHHhh-------CceEEEEEEC--CCCHhHHHhCCC
Confidence 4788999999987765 4789999999999999999999999999986 3489999998 468899999999
Q ss_pred CccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 127 ~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
.++||+++|++|+. +..+.|..+.++|.++|++.++.
T Consensus 71 ~~~Pt~~~~~~g~~-------------~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 71 MSIPTVILFKDGQP-------------VEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp CSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHTTC--
T ss_pred CcCCEEEEEeCCcE-------------eeeEeCCCCHHHHHHHHHHHhhh
Confidence 99999999977743 34577889999999999988754
No 43
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.72 E-value=1.8e-17 Score=143.02 Aligned_cols=108 Identities=23% Similarity=0.508 Sum_probs=90.6
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
++.++.++.++|++.+.+. ++++||+|||+||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++|
T Consensus 2 ~~~v~~l~~~~f~~~~~~~-~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~vd~~--~~~~~~~~~ 71 (122)
T 3aps_A 2 PQASIDLTPQTFNEKVLQG-KTHWVVDFYAPWCGPCQNFAPEFELLARMIK-------GKVRAGKVDCQ--AYPQTCQKA 71 (122)
T ss_dssp CCCSEECCHHHHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTCEEEEEETT--TCHHHHHHT
T ss_pred CcchhcCCHHHHHHHHhcC-CCeEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEeCc--CCHHHHHHc
Confidence 3468899999998766554 4789999999999999999999999999986 35899999984 688999999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccCc----CCHHHHHHHHHHhcc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW----QTADGLLTWINKQTS 175 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~----~~~e~L~~~i~~~l~ 175 (513)
+|+++||+++|.+|. .+..+.|. ++.++|.++|++.+.
T Consensus 72 ~v~~~Pt~~~~~~~~-------------~~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 72 GIKAYPSVKLYQYER-------------AKKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp TCCSSSEEEEEEEEG-------------GGTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred CCCccceEEEEeCCC-------------ccceeeccccCcCCHHHHHHHHHHHHH
Confidence 999999999997652 23345554 899999999998875
No 44
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.72 E-value=2e-17 Score=139.07 Aligned_cols=105 Identities=16% Similarity=0.352 Sum_probs=90.7
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCC
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I 126 (513)
.++.+++++|++.+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+|
T Consensus 2 ~v~~l~~~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~v 71 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLES-SVPVLVDFWAPWCGPCRIIAPVVDEIAGEYK-------DKLKCVKLNT--DESPNVASEYGI 71 (107)
T ss_dssp CCEEECHHHHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCHHHHHHHTC
T ss_pred ccEeccHHHHHHHHhcC-CCcEEEEEECCCCHhHHHHHHHHHHHHHHhC-------CceEEEEEEC--CCCHHHHHHCCC
Confidence 36789999999988654 5789999999999999999999999999986 3489999998 468899999999
Q ss_pred CccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 127 ~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
.++||+++|++|+. +..+.|..+.++|.++|++.+
T Consensus 72 ~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 72 RSIPTIMVFKGGKK-------------CETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp CSSCEEEEESSSSE-------------EEEEESCCCHHHHHHHHHHHC
T ss_pred CcCCEEEEEeCCEE-------------EEEEeCCCCHHHHHHHHHHHh
Confidence 99999999987643 345778899999999998865
No 45
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=2.3e-17 Score=143.50 Aligned_cols=108 Identities=21% Similarity=0.463 Sum_probs=92.4
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
..+.++.+++++|++.+.+ .+||+|||+||++|+.+.|.++++++.+.+ ..+.++.||++ ++.+++++
T Consensus 5 ~~~~v~~l~~~~f~~~~~~----~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~------~~v~~~~vd~~--~~~~~~~~ 72 (126)
T 1x5e_A 5 SSGNVRVITDENWRELLEG----DWMIEFYAPWCPACQNLQPEWESFAEWGED------LEVNIAKVDVT--EQPGLSGR 72 (126)
T ss_dssp CCCSEEECCTTTHHHHTSS----EEEEEEECSSCHHHHHHHHHHHHHHHHHGG------GTCEEEEEETT--TCHHHHHH
T ss_pred CCCccEEecHHHHHHHhCC----CEEEEEECCCCHHHHHHhHHHHHHHHHhcc------CCeEEEEEECc--CCHHHHHH
Confidence 3467899999999987753 389999999999999999999999999863 24899999984 68899999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcccc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~ 177 (513)
|+|+++||+++|++|+ +..+.|.++.++|.+||++.++..
T Consensus 73 ~~v~~~Pt~~~~~~G~--------------~~~~~G~~~~~~l~~~l~~~~~~~ 112 (126)
T 1x5e_A 73 FIINALPTIYHCKDGE--------------FRRYQGPRTKKDFINFISDKEWKS 112 (126)
T ss_dssp TTCCSSSEEEEEETTE--------------EEECCSCCCHHHHHHHHHTCGGGG
T ss_pred cCCcccCEEEEEeCCe--------------EEEeecCCCHHHHHHHHHHHhhcc
Confidence 9999999999997763 245788999999999999987654
No 46
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.72 E-value=1.3e-17 Score=146.33 Aligned_cols=107 Identities=17% Similarity=0.358 Sum_probs=92.1
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
.+.++.++.++|++.+.+. ++++||+||++||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++|
T Consensus 21 ~~~v~~l~~~~f~~~~~~~-~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~~--~~~~l~~~~ 90 (128)
T 2o8v_B 21 SDKIIHLTDDSFDTDVLKA-DGAILVDFWAEWCGPAKMIAPILDEIADEYQ-------GKLTVAKLNID--QNPGTAPKY 90 (128)
T ss_dssp CCCSEEECTTTHHHHTTTC-SSEEEEEEECSSCHHHHHTHHHHHHHHHHTT-------TTEEEEEEETT--TCCTTSGGG
T ss_pred ccccEecChhhHHHHHHhc-CCEEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCeEEEEEECC--CCHHHHHHc
Confidence 3458899999999877543 5889999999999999999999999999986 34999999984 578899999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+|.++||+++|++|+. +..+.|..+.++|.++|++.+
T Consensus 91 ~v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 91 GIRGIPTLLLFKNGEV-------------AATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp TCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHH
T ss_pred CCCccCEEEEEeCCEE-------------EEEEcCCCCHHHHHHHHHHhh
Confidence 9999999999977743 345788899999999998875
No 47
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.72 E-value=3.8e-17 Score=135.83 Aligned_cols=103 Identities=19% Similarity=0.422 Sum_probs=90.1
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCC
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~ 127 (513)
|+.++.++|++.+.+ +++++|.||++||++|+.+.|.++++++.+. + +.++.||+ +++.+++++|+|+
T Consensus 1 V~~l~~~~~~~~~~~--~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~-~~~~~v~~--~~~~~~~~~~~v~ 68 (104)
T 2e0q_A 1 VIHLDSKNFDSFLAS--HEIAVVDFWAEWCAPCLILAPIIEELAEDYP-------Q-VGFGKLNS--DENPDIAARYGVM 68 (104)
T ss_dssp CEECCTTTHHHHHHH--SSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-------T-SEEEEEET--TTCHHHHHHTTCC
T ss_pred CeecCHHHHHHHHhc--CCcEEEEEECCCChhHHHHhHHHHHHHHHcC-------C-ceEEEEEC--CCCHHHHHhCCcc
Confidence 568899999999965 4789999999999999999999999999985 3 89999998 4688999999999
Q ss_pred ccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
++||+++|++|+. +..+.|..+.++|.++|++.++
T Consensus 69 ~~Pt~~~~~~g~~-------------~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 69 SLPTVIFFKDGEP-------------VDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp SSCEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHT
T ss_pred ccCEEEEEECCeE-------------hhhccCCCCHHHHHHHHHHHhc
Confidence 9999999987743 3467788999999999998764
No 48
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.71 E-value=4.7e-17 Score=143.91 Aligned_cols=110 Identities=20% Similarity=0.388 Sum_probs=93.6
Q ss_pred cCcceecCcccHHHHHhcC----------CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc
Q 010286 45 VDHAVELNATNFDAVLRDT----------PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL 114 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~----------~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~ 114 (513)
...++.|++++|++.+.+. .++++||+|||+||++|+.+.|.++++++.+. +.+.++.||++
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~~- 79 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYD-------GQIVIYKVDTE- 79 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTT-------TTCEEEEEETT-
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhc-------CCEEEEEEeCC-
Confidence 3468899999999988752 35789999999999999999999999999986 34899999984
Q ss_pred hhcHHHHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcccc
Q 010286 115 KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 115 d~n~~lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~ 177 (513)
++.+++++|+|+++||+++| ++|+. + .+.|..+.++|.++|++.++..
T Consensus 80 -~~~~l~~~~~v~~~Pt~~~~~~~G~~-------------~-~~~G~~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 80 -KEQELAGAFGIRSIPSILFIPMEGKP-------------E-MAQGAMPKASFKKAIDEFLLKK 128 (136)
T ss_dssp -TCHHHHHHTTCCSSCEEEEECSSSCC-------------E-EEESCCCHHHHHHHHHHHHTSC
T ss_pred -CCHHHHHHcCCCCCCEEEEECCCCcE-------------E-EEeCCCCHHHHHHHHHHHhhcc
Confidence 68899999999999999999 55532 2 4678899999999999988653
No 49
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.71 E-value=4.6e-17 Score=136.08 Aligned_cols=104 Identities=15% Similarity=0.379 Sum_probs=89.8
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCC
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~ 127 (513)
|..++.++|++.+.++ +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+|.
T Consensus 2 v~~~~~~~~~~~~~~~-~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~v~ 71 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLES-EVPVMVDFWAPWCGPCKLIAPVIDELAKEYS-------GKIAVYKLNT--DEAPGIATQYNIR 71 (105)
T ss_dssp CEECCTTTHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCHHHHHHTTCC
T ss_pred ceechhhhHHHHHhcC-CCcEEEEEECCCChHHHHHHHHHHHHHHHhc-------CceEEEEEcC--cchHHHHHhCCCC
Confidence 5788999999988764 5789999999999999999999999999986 3489999998 4688999999999
Q ss_pred ccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
++||+++|++|+. +..+.|..+.+.|.++|++.+
T Consensus 72 ~~Pt~~~~~~g~~-------------~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 72 SIPTVLFFKNGER-------------KESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp SSSEEEEEETTEE-------------EEEEEECCCHHHHHHHHHHHC
T ss_pred cccEEEEEeCCeE-------------EEEEecCCCHHHHHHHHHhhC
Confidence 9999999987743 345778899999999998753
No 50
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.71 E-value=4.3e-17 Score=175.25 Aligned_cols=116 Identities=26% Similarity=0.484 Sum_probs=99.8
Q ss_pred ccccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHH
Q 010286 42 KVEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC 121 (513)
Q Consensus 42 p~~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc 121 (513)
....+.|+.|++++|++.+.+ ++++||+|||||||||++++|.|+++++.+++. .+.++.|||+ .+.++|
T Consensus 10 ~~~~~~v~~l~~~~f~~~~~~--~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~------~v~~~~vd~~--~~~~l~ 79 (504)
T 2b5e_A 10 APEDSAVVKLATDSFNEYIQS--HDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK------NITLAQIDCT--ENQDLC 79 (504)
T ss_dssp CCTTSSCEECCTTTHHHHHTT--CSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT------TCEEEEEETT--TCHHHH
T ss_pred CCCCCCcEECCHHHHHHHHhc--CCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC------CeEEEEEECC--CCHHHH
Confidence 345677999999999999865 478999999999999999999999999999742 3899999995 579999
Q ss_pred HHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccccC
Q 010286 122 DKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (513)
Q Consensus 122 ~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~~ 178 (513)
++|+|++|||+++|++|+.. .+..|.|.++.+.|.+||.+.+++.+
T Consensus 80 ~~~~v~~~Pt~~~~~~g~~~-----------~~~~~~G~~~~~~l~~~l~~~~~~~v 125 (504)
T 2b5e_A 80 MEHNIPGFPSLKIFKNSDVN-----------NSIDYEGPRTAEAIVQFMIKQSQPAV 125 (504)
T ss_dssp HHTTCCSSSEEEEEETTCTT-----------CEEECCSCCSHHHHHHHHHHHTSCSE
T ss_pred HhcCCCcCCEEEEEeCCccc-----------cceeecCCCCHHHHHHHHHHhcCCcc
Confidence 99999999999999887421 13568899999999999999997654
No 51
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.71 E-value=4.4e-17 Score=141.18 Aligned_cols=107 Identities=21% Similarity=0.463 Sum_probs=90.6
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
...++.++.++|++.+.+..+++++|+||++||++|+.+.|.++++++.+. .+.++.||++ +++.+++++|
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--------~~~~~~vd~~-~~~~~~~~~~ 87 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--------DVIFLKLDCN-QENKTLAKEL 87 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECS-STTHHHHHHH
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--------CCEEEEEecC-cchHHHHHHc
Confidence 445889999999999986556889999999999999999999999999885 2789999985 3578999999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+|+++||++++++|+. +..+.|.. .++|.++|++.+
T Consensus 88 ~v~~~Pt~~~~~~G~~-------------~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 88 GIRVVPTFKILKENSV-------------VGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp CCSSSSEEEEEETTEE-------------EEEEESSC-HHHHHHHHHHHT
T ss_pred CCCeeeEEEEEeCCcE-------------EEEEcCCC-HHHHHHHHHHhh
Confidence 9999999999988743 34456765 889999998754
No 52
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.71 E-value=2.8e-17 Score=170.77 Aligned_cols=115 Identities=21% Similarity=0.507 Sum_probs=95.0
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCC
Q 010286 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~ 125 (513)
..|+.|++++|++++.+ ++++||+|||+|||||++++|+|+++|+.+++..+ ..+.+.++.|||+ ++.++|++|+
T Consensus 5 ~~v~~l~~~~f~~~~~~--~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~-~~~~v~~~~Vd~~--~~~~l~~~~~ 79 (382)
T 2r2j_A 5 SEITSLDTENIDEILNN--ADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFP-NENQVVFARVDCD--QHSDIAQRYR 79 (382)
T ss_dssp ---CBCCTTTHHHHHHH--CSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC----CCEEEEEEETT--TCHHHHHHTT
T ss_pred CceEECCHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC-CCCceEEEEEECC--ccHHHHHhcC
Confidence 45889999999998876 37899999999999999999999999999964210 0145999999995 5789999999
Q ss_pred CCccceEEEecCCcccCCCCCCccccchhh-hccCcCCHHHHHHHHHHhccccC
Q 010286 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIR-ALEDWQTADGLLTWINKQTSRSY 178 (513)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~-~~~g~~~~e~L~~~i~~~l~~~~ 178 (513)
|++|||+++|++|+. +. .|.|.++.+.|.+||.++++..+
T Consensus 80 v~~~Pt~~~f~~G~~-------------~~~~~~G~~~~~~l~~~i~~~~~~~v 120 (382)
T 2r2j_A 80 ISKYPTLKLFRNGMM-------------MKREYRGQRSVKALADYIRQQKSDPI 120 (382)
T ss_dssp CCEESEEEEEETTEE-------------EEEECCSCCSHHHHHHHHHHHHSCCC
T ss_pred CCcCCEEEEEeCCcE-------------eeeeecCcchHHHHHHHHHHhccCCc
Confidence 999999999988743 22 48899999999999999987654
No 53
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.71 E-value=4.9e-17 Score=136.13 Aligned_cols=104 Identities=16% Similarity=0.424 Sum_probs=88.2
Q ss_pred ceecCc-ccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCC
Q 010286 48 AVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (513)
Q Consensus 48 v~~L~~-~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I 126 (513)
++.+++ ++|++.+.+..+++++|.||++||++|+.+.|.++++++.++ +.+.++.||+ +++.+++++|+|
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~v 72 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFA-------DNVVVLKVDV--DECEDIAMEYNI 72 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--TTCHHHHHHTTC
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC-------CCeEEEEEec--cchHHHHHHcCC
Confidence 456777 899999986446899999999999999999999999999985 3499999998 468899999999
Q ss_pred CccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 127 ~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
.++||+++|++|+. +..+.| .+.++|.++|++.+
T Consensus 73 ~~~Pt~~~~~~G~~-------------~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 73 SSMPTFVFLKNGVK-------------VEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp CSSSEEEEEETTEE-------------EEEEES-CCHHHHHHHHHHTC
T ss_pred CcccEEEEEcCCcE-------------EEEEcC-CCHHHHHHHHHHhC
Confidence 99999999987743 345677 78899999998753
No 54
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.71 E-value=3e-17 Score=139.43 Aligned_cols=106 Identities=13% Similarity=0.337 Sum_probs=86.0
Q ss_pred ceecCc-ccHHHHHhc-CCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCC
Q 010286 48 AVELNA-TNFDAVLRD-TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (513)
Q Consensus 48 v~~L~~-~~f~~~l~~-~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~ 125 (513)
++.+++ ++|++.+.+ ..+++++|.|||+||++|+.+.|.++++++.+.. +.+.++.||+ +++.+++++|+
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~------~~~~~~~vd~--~~~~~~~~~~~ 73 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSN------SNVSFLSIDA--DENSEISELFE 73 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGG------TTSEEEEEET--TTCHHHHHHTT
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC------CCEEEEEEec--ccCHHHHHHcC
Confidence 567887 999999976 4568899999999999999999999999998642 2489999998 46889999999
Q ss_pred CCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
|+++||+++|++|+. +..+.|. ..++|.++|++.++
T Consensus 74 v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 74 ISAVPYFIIIHKGTI-------------LKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp CCSSSEEEEEETTEE-------------EEEECSC-CHHHHHHHHHHHHH
T ss_pred CCcccEEEEEECCEE-------------EEEecCC-CHHHHHHHHHHHHh
Confidence 999999999987743 3456676 45679999988764
No 55
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.70 E-value=5.9e-17 Score=135.55 Aligned_cols=99 Identities=19% Similarity=0.400 Sum_probs=86.3
Q ss_pred CcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccce
Q 010286 52 NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPM 131 (513)
Q Consensus 52 ~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PT 131 (513)
+.++|++.+.+.++++++|.||++||++|+.+.|.++++++.+. + +.++.||+ +++.+++++|+|+++||
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~-~~~~~vd~--~~~~~~~~~~~v~~~Pt 76 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS-------N-VIFLEVDV--DDCQDVASESEVKSMPT 76 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST-------T-SEEEEEET--TTCHHHHHHTTCCBSSE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc-------C-eEEEEEEh--hhhHHHHHHcCCCcCcE
Confidence 56889999986667899999999999999999999999999985 2 89999998 46899999999999999
Q ss_pred EEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 132 LLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 132 l~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+++|++|+ .+..+.|. +.++|.++|++.+
T Consensus 77 ~~~~~~g~-------------~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 77 FQFFKKGQ-------------KVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEEEETTE-------------EEEEEESS-CHHHHHHHHHHHC
T ss_pred EEEEECCe-------------EEEEEeCC-CHHHHHHHHHHhC
Confidence 99998774 33557787 9999999998764
No 56
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.70 E-value=3.6e-17 Score=138.71 Aligned_cols=106 Identities=19% Similarity=0.359 Sum_probs=89.1
Q ss_pred cceec-CcccHHHHHhcCC--CCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 47 HAVEL-NATNFDAVLRDTP--ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 47 ~v~~L-~~~~f~~~l~~~~--~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
.++.+ +.++|++.+.+.. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--~~~~~~~~~ 73 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYA-------GKVIFLKVDV--DAVAAVAEA 73 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--TTTHHHHHH
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-------CCeEEEEEEC--CchHHHHHH
Confidence 36667 5689999987633 5789999999999999999999999999985 2489999998 468899999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
|+|+++||+++|++|+. +..+.|. +.++|.++|++.+.
T Consensus 74 ~~v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 74 AGITAMPTFHVYKDGVK-------------ADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp HTCCBSSEEEEEETTEE-------------EEEEESC-CHHHHHHHHHHHHC
T ss_pred cCCCcccEEEEEECCeE-------------EEEEcCC-CHHHHHHHHHHHhc
Confidence 99999999999987743 3456777 89999999988763
No 57
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.70 E-value=4.3e-17 Score=140.20 Aligned_cols=109 Identities=17% Similarity=0.343 Sum_probs=92.2
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
....++.++.++|+..+.+. ++++||.||++||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~~--~~~~~~~~ 79 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSS-NKPVLVDFWATWCGPCKMVAPVLEEIATERA-------TDLTVAKLDVD--TNPETARN 79 (121)
T ss_dssp --CCSEECCTTTHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEETT--TCHHHHHH
T ss_pred hcccceecCHHHHHHHHHhC-CCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEECC--CCHHHHHh
Confidence 34568999999999887654 4789999999999999999999999999985 34899999984 68899999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
|+|.++||+++|++|+. +..+.|..+.++|.++|++.++
T Consensus 80 ~~i~~~Pt~~~~~~g~~-------------~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 80 FQVVSIPTLILFKDGQP-------------VKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp TTCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHTCSCCC
T ss_pred cCCCcCCEEEEEECCEE-------------EEEecCCCCHHHHHHHHHHHHh
Confidence 99999999999987743 3457888999999999977653
No 58
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.70 E-value=6.2e-17 Score=167.38 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=95.2
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhh---h---HHHHHHHHHhCCCCCCCCCeEEEEEEeccchh
Q 010286 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNY---K---PQYEKVARLFNGPNAAHPGIILMTRVDCALKI 116 (513)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~---~---P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~ 116 (513)
...+.|+.|+.++|++.+.+ ++++||+|||||||||+.. . |.|+++|+.+++ ..|.+++|||+ +
T Consensus 10 ~~~~~v~~lt~~~f~~~i~~--~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~------~~v~~~~Vd~~--~ 79 (367)
T 3us3_A 10 DGVDRVINVNAKNYKNVFKK--YEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLED------KGVGFGLVDSE--K 79 (367)
T ss_dssp CCCCCCEECCTTTHHHHHHH--CSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTT------TTEEEEEEETT--T
T ss_pred CCCCccEECCHHHHHHHHhh--CCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhc------CCceEEEEeCc--c
Confidence 34567999999999999976 3789999999999997433 3 799999999973 24999999995 5
Q ss_pred cHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccccC
Q 010286 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (513)
Q Consensus 117 n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~~ 178 (513)
++++|++|+|++|||+++|++|+. ..|.|.++.+.|++||.+++++.+
T Consensus 80 ~~~l~~~~~V~~~PTl~~f~~G~~--------------~~y~G~~~~~~i~~~i~~~~~~~v 127 (367)
T 3us3_A 80 DAAVAKKLGLTEEDSIYVFKEDEV--------------IEYDGEFSADTLVEFLLDVLEDPV 127 (367)
T ss_dssp THHHHHHHTCCSTTEEEEEETTEE--------------EECCSCCSHHHHHHHHHHHHSCSE
T ss_pred cHHHHHHcCCCcCceEEEEECCcE--------------EEeCCCCCHHHHHHHHHHhcCCCc
Confidence 889999999999999999987732 358899999999999999987654
No 59
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.70 E-value=7.5e-17 Score=139.15 Aligned_cols=108 Identities=17% Similarity=0.358 Sum_probs=91.4
Q ss_pred cCcceecCcccHHHHHhcC--CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHH
Q 010286 45 VDHAVELNATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~--~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~ 122 (513)
...+..++.++|++.+.+. .+++++|.||++||++|+.+.|.++++++.+. + +.++.||+ +++.++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~-~~~~~vd~--~~~~~~~~ 81 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFP-------N-AVFLKVDV--DELKPIAE 81 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-------T-SEEEEEET--TTCHHHHH
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-------C-cEEEEEEC--CCCHHHHH
Confidence 3456778999999988752 35789999999999999999999999999885 3 88999998 46889999
Q ss_pred HCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 123 ~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
+|+|+++||+++|++|+. +..+.|.. .++|.++|++.++.
T Consensus 82 ~~~v~~~Pt~~~~~~G~~-------------~~~~~G~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 82 QFSVEAMPTFLFMKEGDV-------------KDRVVGAI-KEELTAKVGLHAAA 121 (122)
T ss_dssp HTTCCSSSEEEEEETTEE-------------EEEEESSC-HHHHHHHHHHHHSC
T ss_pred HcCCCcccEEEEEeCCEE-------------EEEEeCcC-HHHHHHHHHHHhcc
Confidence 999999999999987743 34577888 99999999988753
No 60
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.70 E-value=5.9e-17 Score=139.00 Aligned_cols=103 Identities=17% Similarity=0.441 Sum_probs=88.0
Q ss_pred cceecCc-ccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCC
Q 010286 47 HAVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (513)
Q Consensus 47 ~v~~L~~-~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~ 125 (513)
.++.+++ ++|++.+.+..+++++|.|||+||++|+.+.|.++++++.++ +.++.||+ +++.+++++|+
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~~---------~~~~~vd~--~~~~~~~~~~~ 82 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKYD---------AIFVKVDV--DKLEETARKYN 82 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTSS---------SEEEEEET--TTSHHHHHHTT
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHcC---------cEEEEEEC--CccHHHHHHcC
Confidence 4788888 999999986556889999999999999999999999988761 78999998 46889999999
Q ss_pred CCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
|+++||+++|++|+. +..+.| .+.++|.++|++.+
T Consensus 83 v~~~Pt~~~~~~G~~-------------~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 83 ISAMPTFIAIKNGEK-------------VGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp CCSSSEEEEEETTEE-------------EEEEES-SCHHHHHHHHHHHC
T ss_pred CCccceEEEEeCCcE-------------EEEEeC-CCHHHHHHHHHHhC
Confidence 999999999987743 345667 68899999998763
No 61
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.70 E-value=5.2e-17 Score=146.51 Aligned_cols=112 Identities=12% Similarity=0.167 Sum_probs=89.4
Q ss_pred ecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCcc
Q 010286 50 ELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHY 129 (513)
Q Consensus 50 ~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~ 129 (513)
..+.++|++.+.+..++++||+|||+||++|+.+.|.++++++++. +.+.++.||+ +++++++++|+|.++
T Consensus 8 i~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~-------~~~~~~~vd~--d~~~~l~~~~~v~~~ 78 (149)
T 3gix_A 8 LTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLS-------KMAAIYLVDV--DQTAVYTQYFDISYI 78 (149)
T ss_dssp ECSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTT-------TTEEEEEEET--TTCCHHHHHTTCCSS
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CceEEEEEEC--CcCHHHHHHcCCCcc
Confidence 3467899999874446899999999999999999999999999885 3489999998 568899999999999
Q ss_pred ceEEEecCCcccCCCCCCccccchhhhccC-cCCHHHHHHHHHHhc
Q 010286 130 PMLLWGSPSKFVAGSWEPNQEKKEIRALED-WQTADGLLTWINKQT 174 (513)
Q Consensus 130 PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g-~~~~e~L~~~i~~~l 174 (513)
||+++|++|+...-.... ..-..+.| ..+.++|.++|++.+
T Consensus 79 Pt~~~~~~G~~v~~~~g~----~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 79 PSTVFFFNGQHMKVDYGS----PDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp SEEEEEETTEEEEEECSS----SCCSCEESCCSSHHHHHHHHHHHH
T ss_pred CeEEEEECCeEEEeecCC----CCCCeEeeecCCHHHHHHHHHHHH
Confidence 999999988644100000 00145678 889999999998875
No 62
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.69 E-value=7.7e-17 Score=140.88 Aligned_cols=105 Identities=19% Similarity=0.361 Sum_probs=89.6
Q ss_pred cCcceecCc-ccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 45 VDHAVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 45 ~~~v~~L~~-~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
..-++.+++ ++|++.+.. ++++||+|||+||++|+.+.|.++++++.+. .+.++.||+ +++.+++++
T Consensus 18 ~~mv~~l~~~~~f~~~~~~--~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--------~v~~~~vd~--d~~~~l~~~ 85 (125)
T 1r26_A 18 YPSVVDVYSVEQFRNIMSE--DILTVAWFTAVWCGPCKTIERPMEKIAYEFP--------TVKFAKVDA--DNNSEIVSK 85 (125)
T ss_dssp CSCCEEECCHHHHHHHHHS--SSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--------TSEEEEEET--TTCHHHHHH
T ss_pred ccceEECCCHHHHHHHHcc--CCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--------CCEEEEEEC--CCCHHHHHH
Confidence 334888998 999999944 4789999999999999999999999999983 389999998 468899999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
|+|.++||+++|++|+. +..+.| .+.++|.++|++.++
T Consensus 86 ~~v~~~Pt~~i~~~G~~-------------~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 86 CRVLQLPTFIIARSGKM-------------LGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp TTCCSSSEEEEEETTEE-------------EEEEES-SCHHHHHHHHHHHHH
T ss_pred cCCCcccEEEEEeCCeE-------------EEEEeC-CCHHHHHHHHHHHhc
Confidence 99999999999987743 345677 688999999988764
No 63
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=6.3e-18 Score=149.61 Aligned_cols=88 Identities=24% Similarity=0.406 Sum_probs=78.2
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
++.++.++.++|++.+.+.+++++||+|||+||++|+.+.|.|+++++.+.+ ..+.++.||+ +++.+++++|
T Consensus 6 ~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~------~~v~~~~vd~--~~~~~~~~~~ 77 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNC------TGLNFGKVDV--GRYTDVSTRY 77 (137)
T ss_dssp CSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCS------SSCEEEECCT--TTCHHHHHHT
T ss_pred CceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC------CCeEEEEEeC--ccCHHHHHHc
Confidence 4568999999999999887667899999999999999999999999999963 2489999998 4689999999
Q ss_pred CCC------ccceEEEecCCcc
Q 010286 125 SVG------HYPMLLWGSPSKF 140 (513)
Q Consensus 125 ~I~------~~PTl~~f~~g~~ 140 (513)
+|+ ++||+++|++|+.
T Consensus 78 ~v~~~~~~~~~Pt~~~~~~G~~ 99 (137)
T 2dj0_A 78 KVSTSPLTKQLPTLILFQGGKE 99 (137)
T ss_dssp TCCCCSSSSCSSEEEEESSSSE
T ss_pred cCcccCCcCCCCEEEEEECCEE
Confidence 999 9999999987753
No 64
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.69 E-value=1.2e-16 Score=135.68 Aligned_cols=102 Identities=21% Similarity=0.337 Sum_probs=86.4
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCC
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I 126 (513)
.....+.++|++.+.+ ++++||+|||+||++|+.+.|.++++++.+. .+.++.||+ +++.+++++|+|
T Consensus 8 ~~~~~~~~~f~~~~~~--~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--------~~~~~~vd~--~~~~~l~~~~~v 75 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQ--DKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--------QADFYKLDV--DELGDVAQKNEV 75 (109)
T ss_dssp CEECCSHHHHHHHTTS--SSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTCHHHHHHTTC
T ss_pred ccCCCCHHHHHHHHhc--CCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--------CCEEEEEEC--CCCHHHHHHcCC
Confidence 3456678999999876 4789999999999999999999999999985 288999998 468999999999
Q ss_pred CccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 127 ~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+++||+++|.+|+. +..+.|. +.++|.++|++.+
T Consensus 76 ~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 76 SAMPTLLLFKNGKE-------------VAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp CSSSEEEEEETTEE-------------EEEEESS-CHHHHHHHHHHHC
T ss_pred CccCEEEEEECCEE-------------EEEEeCC-CHHHHHHHHHhhC
Confidence 99999999987743 3456676 7799999998753
No 65
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.69 E-value=3.1e-17 Score=141.18 Aligned_cols=114 Identities=18% Similarity=0.422 Sum_probs=90.4
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
..+.+..|++++|++.+... ++++||+|||+||++|+.+.|.|+++++.+.+.+. ...+.++.|||+. +. +++
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~-~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~--~~~v~~~~vd~~~--~~-~~~- 77 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDD-TKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEF--KDRVVIAKVDATA--ND-VPD- 77 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCT-TSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSC--TTSSEEEEEETTT--SC-CSS-
T ss_pred CCCCeEEecccCHHHHhhcC-CCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhccc--CCceEEEEEECcc--cc-ccc-
Confidence 35578999999999887543 57899999999999999999999999999974210 1258999999953 22 665
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
+|+++||+++|++|... .+..+.|.++.++|.+||+++++.
T Consensus 78 -~v~~~Pt~~~~~~~~~~-----------~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 78 -EIQGFPTIKLYPAGAKG-----------QPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp -CCSSSSEEEEECSSCTT-----------SCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred -ccCcCCeEEEEeCcCCC-----------CceEecCCCCHHHHHHHHHhccCc
Confidence 99999999999876210 134578899999999999998754
No 66
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.69 E-value=1.5e-17 Score=140.10 Aligned_cols=98 Identities=12% Similarity=0.127 Sum_probs=72.9
Q ss_pred CcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccce
Q 010286 52 NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPM 131 (513)
Q Consensus 52 ~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PT 131 (513)
+.++|++.+.+ +++++|+|||+||++|+.+.|.++++++.+. .+.++.||+ +++++++++|+|+++||
T Consensus 7 ~~~~~~~~~~~--~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--------~~~~~~vd~--~~~~~l~~~~~v~~~Pt 74 (105)
T 4euy_A 7 TIEELATYIEE--QQLVLLFIKTENCGVCDVMLRKVNYVLENYN--------YVEKIEILL--QDMQEIAGRYAVFTGPT 74 (105)
T ss_dssp ---CCSSSTTC--SSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--------TEEEEEEEE--CCC---------CCCCE
T ss_pred CHHHHHHHHhc--CCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--------CceEEEEEC--CCCHHHHHhcCCCCCCE
Confidence 45667766743 5889999999999999999999999999873 389999998 46889999999999999
Q ss_pred EEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 132 LLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 132 l~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+++|++|+ .+..+.|..+.++|.++|++.+
T Consensus 75 ~~~~~~G~-------------~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 75 VLLFYNGK-------------EILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEEEETTE-------------EEEEEESSCCHHHHHHHHHTTC
T ss_pred EEEEeCCe-------------EEEEEeCCcCHHHHHHHHHHhh
Confidence 99998774 3456788899999999998764
No 67
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.69 E-value=1.1e-16 Score=152.21 Aligned_cols=111 Identities=18% Similarity=0.400 Sum_probs=96.6
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
....++.+++++|+..+.. ++++||.|||+||++|+.+.|.|+++++.+. +.+.++.|||+ ++.++|++
T Consensus 95 ~~~~v~~l~~~~f~~~~~~--~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~-------~~v~~~~vd~~--~~~~l~~~ 163 (210)
T 3apq_A 95 DDPEIITLERREFDAAVNS--GELWFVNFYSPGCSHCHDLAPTWREFAKEVD-------GLLRIGAVNCG--DDRMLCRM 163 (210)
T ss_dssp TCTTSEECCHHHHHHHHHH--SCCEEEEEECTTCHHHHHHHHHHHHHHHHTB-------TTBEEEEEETT--TCHHHHHH
T ss_pred CCCceEEecHHHHHHHHcc--CCcEEEEEeCCCChhHHHHHHHHHHHHHHhc-------CceEEEEEECC--ccHHHHHH
Confidence 4557899999999999955 4789999999999999999999999999986 35999999984 68899999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccccC
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~~ 178 (513)
|+|.++||+++|++|+. +..+.|.++.++|.+||++.++..+
T Consensus 164 ~~v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~i~~~l~~~~ 205 (210)
T 3apq_A 164 KGVNSYPSLFIFRSGMA-------------AVKYNGDRSKESLVAFAMQHVRSTV 205 (210)
T ss_dssp TTCCSSSEEEEECTTSC-------------CEECCSCCCHHHHHHHHHHHHHCCS
T ss_pred cCCCcCCeEEEEECCCc-------------eeEecCCCCHHHHHHHHHHhCcccc
Confidence 99999999999987743 3567889999999999999987543
No 68
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.69 E-value=2.2e-17 Score=144.70 Aligned_cols=115 Identities=18% Similarity=0.464 Sum_probs=94.5
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
....|+.|+.++|+..+.+. ++++||+|||+||++|+.+.|.|+++++.+.+. +.+.++.|||+ ++..++++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~-~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-----~~~~~~~vd~~--~~~~~~~~ 76 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDP-KKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ-----KDLVIAKMDAT--ANDITNDQ 76 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCT-TSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS-----SSEEEEEECTT--TSCCCCSS
T ss_pred CCCceEEEcCCCHHHHhccC-CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-----CCEEEEEecCC--cCHHHHhh
Confidence 45679999999999888653 588999999999999999999999999999642 35999999984 56788999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhcc-CcCCHHHHHHHHHHhcccc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE-DWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~-g~~~~e~L~~~i~~~l~~~ 177 (513)
|+|+++||+++|.+|.... ...+. |.++.++|.+||++.++..
T Consensus 77 ~~v~~~Pt~~~~~~g~~~~-----------~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 77 YKVEGFPTIYFAPSGDKKN-----------PIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp CCCSSSSEEEEECTTCTTS-----------CEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred cCCCcCCEEEEEeCCCccc-----------ceEecCCCcCHHHHHHHHHHhcccc
Confidence 9999999999998763211 11355 5589999999999998754
No 69
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.69 E-value=1.6e-16 Score=138.38 Aligned_cols=109 Identities=20% Similarity=0.417 Sum_probs=90.7
Q ss_pred ccccCcceec-CcccHHHHHhcC--CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcH
Q 010286 42 KVEVDHAVEL-NATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINT 118 (513)
Q Consensus 42 p~~~~~v~~L-~~~~f~~~l~~~--~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~ 118 (513)
+.....++.+ +.++|++.+... .++++||+||++||++|+.+.|.++++++.+. .+.++.||+ +++.
T Consensus 12 ~~~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--d~~~ 81 (124)
T 1xfl_A 12 ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--------NVLFLKVDT--DELK 81 (124)
T ss_dssp CCCCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--------SEEEEEEET--TTSH
T ss_pred hcCCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CcEEEEEEC--ccCH
Confidence 3445567777 679999988753 35889999999999999999999999999974 389999998 4688
Q ss_pred HHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 119 NLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 119 ~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+++++|+|+++||+++|++|+. +..+.| .+.++|.++|++.+
T Consensus 82 ~l~~~~~v~~~Pt~~~~~~G~~-------------~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 82 SVASDWAIQAMPTFMFLKEGKI-------------LDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp HHHHHTTCCSSSEEEEEETTEE-------------EEEEES-CCHHHHHHHHHHHC
T ss_pred HHHHHcCCCccCEEEEEECCEE-------------EEEEeC-CCHHHHHHHHHHhc
Confidence 9999999999999999987743 345667 58899999998765
No 70
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.68 E-value=1.9e-16 Score=132.11 Aligned_cols=102 Identities=24% Similarity=0.471 Sum_probs=86.3
Q ss_pred eecCc-ccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCC
Q 010286 49 VELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (513)
Q Consensus 49 ~~L~~-~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~ 127 (513)
..+++ ++|++.+.+..+++++|.||++||++|+.+.|.++++++.+. .+.++.||+ +++.+++++|+|.
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~--~~~~~~~~~~~v~ 71 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--------EVEFAKVDV--DQNEEAAAKYSVT 71 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTCHHHHHHTTCC
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--------CCEEEEEec--cCCHHHHHHcCCc
Confidence 45665 899999986556889999999999999999999999999874 389999998 4688999999999
Q ss_pred ccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
++||+++|++|+. +..+.| .+.++|.++|++.+
T Consensus 72 ~~Pt~~~~~~g~~-------------~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 72 AMPTFVFIKDGKE-------------VDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp SSSEEEEEETTEE-------------EEEEES-SCHHHHHHHHHHHC
T ss_pred cccEEEEEeCCcE-------------EEEEeC-CCHHHHHHHHHhhC
Confidence 9999999987743 345667 68899999998753
No 71
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.68 E-value=1.9e-17 Score=144.28 Aligned_cols=106 Identities=18% Similarity=0.399 Sum_probs=86.4
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCH--------------HHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEe
Q 010286 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCP--------------ACRNYKPQYEKVARLFNGPNAAHPGIILMTRVD 111 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg--------------~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VD 111 (513)
+.++.+++++|++.+.+. +++++|+|||+||+ +|+.+.|.++++++.+. +.+.++.||
T Consensus 3 ~~v~~l~~~~f~~~~~~~-~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~-------~~~~~~~vd 74 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKA-DGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQ-------GKLTVAKLN 74 (123)
T ss_dssp CSCEECCSTTHHHHTTSC-SSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------------CEEEEEE
T ss_pred CccEecChhhHHHHHHhC-CCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhc-------CCeEEEEEE
Confidence 458899999999877543 58899999999999 99999999999999885 358999999
Q ss_pred ccchhcHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 112 CALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 112 c~~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
++ ++.+++++|+|+++||+++|++|+. +..+.|.++.++|.++|++.+
T Consensus 75 ~d--~~~~l~~~~~v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 75 ID--QNPGTAPKYGIRGIPTLLLFKNGEV-------------AATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp TT--SCTTTGGGGTCCBSSEEEEEESSSE-------------EEEEESCCCHHHHHHHHTTTC
T ss_pred CC--CCHHHHHHcCCCccCEEEEEECCEE-------------EEEEeCCCCHHHHHHHHHHHh
Confidence 84 5789999999999999999987743 345788899999999998765
No 72
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.68 E-value=1.5e-16 Score=153.54 Aligned_cols=111 Identities=24% Similarity=0.539 Sum_probs=96.1
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
..+.++.|++++|++.+.+ +++++|+|||+||++|+.+.|.|+++++.+++.+ ..+.++.|||+ ++.++|++
T Consensus 13 ~~~~v~~l~~~~~~~~~~~--~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~----~~~~~~~vd~~--~~~~l~~~ 84 (241)
T 3idv_A 13 EENGVLVLNDANFDNFVAD--KDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKD----PPIPVAKIDAT--SASVLASR 84 (241)
T ss_dssp EETTEEEECTTTHHHHHTT--CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSS----SCCCEEEEETT--TCHHHHHH
T ss_pred cCCCcEEecccCHHHHHhc--CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcC----CceEEEEEecc--CCHHHHHh
Confidence 3467999999999999876 4789999999999999999999999999997533 34899999984 68999999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
|+|+++||+++|++|+. + .+.|.++.++|.++|.+.+..
T Consensus 85 ~~v~~~Pt~~~~~~g~~-------------~-~~~g~~~~~~l~~~i~~~~~~ 123 (241)
T 3idv_A 85 FDVSGYPTIKILKKGQA-------------V-DYEGSRTQEEIVAKVREVSQP 123 (241)
T ss_dssp TTCCSSSEEEEEETTEE-------------E-ECCSCSCHHHHHHHHHHHHST
T ss_pred cCCCcCCEEEEEcCCCc-------------c-cccCcccHHHHHHHHhhccCc
Confidence 99999999999987632 2 478999999999999998764
No 73
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.68 E-value=1.2e-16 Score=153.43 Aligned_cols=112 Identities=18% Similarity=0.373 Sum_probs=96.6
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHH
Q 010286 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (513)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~ 122 (513)
.....+..+++++|++.+.+. ++++||+|||+||++|+.+.|.|+++++.++ +.+.++.||+ +.+.++++
T Consensus 9 ~~~~~~~~lt~~~f~~~v~~~-~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~--d~~~~l~~ 78 (222)
T 3dxb_A 9 PMSDKIIHLTDDSFDTDVLKA-DGAILVDFWAEWCGPCKMIAPILDEIADEYQ-------GKLTVAKLNI--DQNPGTAP 78 (222)
T ss_dssp CCSCCCEECCTTTHHHHHTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCTTTGG
T ss_pred CCCCCceeCCHHHHHHHHHhc-CCEEEEEEECCcCHHHHHHHHHHHHHHHHhc-------CCcEEEEEEC--CCCHHHHH
Confidence 345678999999999977654 5789999999999999999999999999986 3489999998 46789999
Q ss_pred HCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcccc
Q 010286 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 123 ~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~ 177 (513)
+|+|.++||+++|++|+. +..+.|.++.++|.++|++.+...
T Consensus 79 ~~~v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 79 KYGIRGIPTLLLFKNGEV-------------AATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp GGTCCSBSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHSCCS
T ss_pred HcCCCcCCEEEEEECCeE-------------EEEeccccChHHHHHHHHhhcccc
Confidence 999999999999987743 356789999999999999998643
No 74
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.67 E-value=1.1e-16 Score=170.96 Aligned_cols=110 Identities=36% Similarity=0.673 Sum_probs=96.5
Q ss_pred cceecCcccHHHHHhcC-CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCC
Q 010286 47 HAVELNATNFDAVLRDT-PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~-~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~ 125 (513)
.|+.|++++|++.+.+. .++++||+|||+||+||++++|.|+++|+.+. +.+.++.|||+ ++.++|++|+
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~-------~~v~~~~vd~~--~~~~l~~~~~ 72 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLK-------GIVPLAKVDCT--ANTNTCNKYG 72 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCCEEEEETT--TCHHHHHHTT
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhc-------CceEEEEEECC--CCHHHHHhcC
Confidence 48899999999999653 23789999999999999999999999999997 34899999995 5899999999
Q ss_pred CCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccccC
Q 010286 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (513)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~~ 178 (513)
|+++||+++|++|+ .+..|.|.++.+.|.+|+.+++++.+
T Consensus 73 v~~~Ptl~~~~~g~-------------~~~~~~G~~~~~~l~~~~~~~~~~~~ 112 (481)
T 3f8u_A 73 VSGYPTLKIFRDGE-------------EAGAYDGPRTADGIVSHLKKQAGPAS 112 (481)
T ss_dssp CCEESEEEEEETTE-------------EEEECCSCSSHHHHHHHHHHHTSCSE
T ss_pred CCCCCEEEEEeCCc-------------eeeeecCccCHHHHHHHHHhhcccCc
Confidence 99999999998873 33568999999999999999987654
No 75
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.67 E-value=7.6e-17 Score=142.57 Aligned_cols=106 Identities=12% Similarity=0.167 Sum_probs=90.7
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------hhc
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------KIN 117 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------d~n 117 (513)
...++.++.++|++.+.+ +++|+|||+||++|+.+.|.++++++.++ +.++.||++. +++
T Consensus 15 ~~~v~~l~~~~~~~~~~~----~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---------v~~~~vd~~~~~~~~~~d~~ 81 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG----DAILAVYSKTCPHCHRDWPQLIQASKEVD---------VPIVMFIWGSLIGERELSAA 81 (135)
T ss_dssp TTEEEECCHHHHHHHHTS----SEEEEEEETTCHHHHHHHHHHHHHHTTCC---------SCEEEEEECTTCCHHHHHHH
T ss_pred cCceeecCHHHHHHHhCC----cEEEEEECCcCHhhhHhChhHHHHHHHCC---------CEEEEEECCCchhhhhhhhh
Confidence 456889999999999875 79999999999999999999999998763 7789999832 468
Q ss_pred HHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 118 TNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 118 ~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
.+++++|+|+++||+++|++|+. +..+.|..+.+.+.+++++.+.+
T Consensus 82 ~~l~~~~~v~~~Pt~~~~~~G~~-------------v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 82 RLEMNKAGVEGTPTLVFYKEGRI-------------VDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp HHHHHHHTCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHC--
T ss_pred HHHHHHcCCceeCeEEEEcCCEE-------------EEEEeCCCCHHHHHHHHHHHhCC
Confidence 89999999999999999998743 45678999999999999998764
No 76
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.67 E-value=1e-16 Score=164.53 Aligned_cols=110 Identities=18% Similarity=0.170 Sum_probs=95.5
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHH-------HHHHHHHhCCCCCCCCCeEEEEEEeccchh
Q 010286 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQ-------YEKVARLFNGPNAAHPGIILMTRVDCALKI 116 (513)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~-------~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~ 116 (513)
..+.|+.|++++|++.+.+ ++++||+||||||| |++++|+ |+++|+.+++. .+.+++|||+ +
T Consensus 9 ~~~~v~~l~~~~f~~~i~~--~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~------~v~~~~Vd~~--~ 77 (350)
T 1sji_A 9 GKDRVVSLTEKNFKQVLKK--YDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK------DIGFVMVDAK--K 77 (350)
T ss_dssp CCCCCEEECHHHHHHHHTT--CSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS------SEEEEEEETT--T
T ss_pred CCCccEECCHHHHHHHHhh--CCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc------CcEEEEEeCC--C
Confidence 3466999999999999876 47899999999999 9999999 99999999632 4999999995 5
Q ss_pred cHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccccC
Q 010286 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (513)
Q Consensus 117 n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~~ 178 (513)
+.++|++|+|++|||+++|++|+ +..|.|.++.+.|.+||.+++++.+
T Consensus 78 ~~~l~~~~~v~~~Pt~~~~~~g~--------------~~~~~G~~~~~~l~~~i~~~~~~~~ 125 (350)
T 1sji_A 78 EAKLAKKLGFDEEGSLYVLKGDR--------------TIEFDGEFAADVLVEFLLDLIEDPV 125 (350)
T ss_dssp THHHHHHHTCCSTTEEEEEETTE--------------EEEECSCCCHHHHHHHHHTTSSCSE
T ss_pred CHHHHHhcCCCccceEEEEECCc--------------EEEecCCCCHHHHHHHHHHhcCCcc
Confidence 78999999999999999998873 2468899999999999999887543
No 77
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.67 E-value=2.2e-16 Score=134.43 Aligned_cols=104 Identities=19% Similarity=0.413 Sum_probs=88.9
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
++....++.++|++.+.+ +++++|.||++||++|+.+.|.++++++.+. .+.++.||++ ++.+++++|
T Consensus 8 ~~~~~~~~~~~f~~~~~~--~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--------~v~~~~vd~~--~~~~~~~~~ 75 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIISQ--NELVIVDFFAEWCGPCKRIAPFYEECSKTYT--------KMVFIKVDVD--EVSEVTEKE 75 (112)
T ss_dssp -CCEEECSHHHHHHHHHH--CSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEETT--TTHHHHHHT
T ss_pred eeEEEECCHHHHHHHHcc--CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--------CCEEEEEECC--CCHHHHHHc
Confidence 455778999999999975 4789999999999999999999999999874 3899999984 678999999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+|.++||+++|++|+. +..+.|. +.++|.++|++.+
T Consensus 76 ~v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 76 NITSMPTFKVYKNGSS-------------VDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp TCCSSSEEEEEETTEE-------------EEEEESC-CHHHHHHHHHTTC
T ss_pred CCCcccEEEEEECCcE-------------EEEEeCC-CHHHHHHHHHHhh
Confidence 9999999999987743 3456787 9999999998754
No 78
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.67 E-value=1.1e-16 Score=141.38 Aligned_cols=109 Identities=17% Similarity=0.341 Sum_probs=89.6
Q ss_pred cCcceecCc-ccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 45 VDHAVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 45 ~~~v~~L~~-~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
...++.+++ ++|++.+.+.+++++||+|||+||++|+.+.|.++++++.+. +.++.||+ +++.+++++
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---------v~~~~vd~--~~~~~l~~~ 87 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYYY---------VTLVDIDV--DIHPKLNDQ 87 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTEE---------CEEEEEET--TTCHHHHHH
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcC---------EEEEEEec--cchHHHHHh
Confidence 345778875 899999988777899999999999999999999999887662 88999998 468999999
Q ss_pred CCCCccceEEEec--CCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 124 FSVGHYPMLLWGS--PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 124 f~I~~~PTl~~f~--~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
|+|+++||+++|. +|+. ..+..+.|. +.++|.++|++.+..
T Consensus 88 ~~v~~~Pt~~~~~~~~g~g-----------~~~~~~~G~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 88 HNIKALPTFEFYFNLNNEW-----------VLVHTVEGA-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp TTCCSSSEEEEEEEETTEE-----------EEEEEEESC-CHHHHHHHHHHHSEE
T ss_pred cCCCCCCEEEEEEecCCCe-----------EEEEEEcCC-CHHHHHHHHHHHHHh
Confidence 9999999999985 6531 134456776 899999999988753
No 79
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.67 E-value=2.7e-16 Score=142.02 Aligned_cols=108 Identities=20% Similarity=0.401 Sum_probs=91.1
Q ss_pred CcceecC-cccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 46 DHAVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 46 ~~v~~L~-~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
..++.++ .++|++.+.+.+++++||+||++||++|+.+.|.++++++.+. .+.|+.||+ +++.+++++|
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--------~v~~~~vd~--~~~~~l~~~~ 81 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--------QVSFVKLEA--EGVPEVSEKY 81 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTSHHHHHHT
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--------CeEEEEEEC--CCCHHHHHHc
Confidence 4577776 5999999987656889999999999999999999999999873 389999998 4688999999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcccc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~ 177 (513)
+|+++||+++|.+|+. +..+.| .+.++|.++|++.++..
T Consensus 82 ~v~~~Pt~~~~~~G~~-------------~~~~~G-~~~~~l~~~i~~~l~~~ 120 (153)
T 2wz9_A 82 EISSVPTFLFFKNSQK-------------IDRLDG-AHAPELTKKVQRHASSG 120 (153)
T ss_dssp TCCSSSEEEEEETTEE-------------EEEEES-SCHHHHHHHHHHHSCTT
T ss_pred CCCCCCEEEEEECCEE-------------EEEEeC-CCHHHHHHHHHHHhccc
Confidence 9999999999987743 344566 57889999999988653
No 80
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.67 E-value=2.3e-16 Score=139.90 Aligned_cols=106 Identities=22% Similarity=0.371 Sum_probs=78.5
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCC
Q 010286 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~ 125 (513)
..++.++.++|+..+.++. + +||.||++||++|+.+.|.++++++.+. +.+.|+.||+ +++.+++++|+
T Consensus 33 ~~v~~l~~~~~~~~~~~~~-~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~--~~~~~l~~~~~ 101 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAP-L-TLVDFFAPWCGPCRLVSPILEELARDHA-------GRLKVVKVNV--DEHPGLAARYG 101 (140)
T ss_dssp ----------------CCC-E-EEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--TTCHHHHHHTT
T ss_pred CccccCCHHHHHHHHHcCC-C-EEEEEECCCCHHHHHHHHHHHHHHHHcc-------CceEEEEEEC--CCCHHHHHHCC
Confidence 5688999999999887653 4 8999999999999999999999999986 3599999998 46889999999
Q ss_pred CCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
|.++||+++|++|+. +..+.|..+.++|.+||++.+.
T Consensus 102 v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 102 VRSVPTLVLFRRGAP-------------VATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp CCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHT
T ss_pred CCccCEEEEEeCCcE-------------EEEEeCCCCHHHHHHHHHHHHc
Confidence 999999999987743 3457888999999999998874
No 81
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.67 E-value=1.1e-16 Score=139.80 Aligned_cols=86 Identities=27% Similarity=0.524 Sum_probs=76.7
Q ss_pred CCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccceEEEecCCcccCCC
Q 010286 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGS 144 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~ 144 (513)
++++||+|||+||++|+++.|.++++++.++ +.+.++.||+ +++.+++++|+|+++||+++|++|+
T Consensus 42 ~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-------~~v~~~~vd~--d~~~~l~~~~~v~~~Pt~~~~~~G~----- 107 (128)
T 3ul3_B 42 NTVIVLYFFAKWCQACTMQSTEMDKLQKYYG-------KRIYLLKVDL--DKNESLARKFSVKSLPTIILLKNKT----- 107 (128)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHG-------GGEEEEEEEG--GGCHHHHHHTTCCSSSEEEEEETTE-----
T ss_pred CCEEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCeEEEEEEC--CCCHHHHHHcCCCCcCEEEEEECCE-----
Confidence 5889999999999999999999999999996 4599999998 4688999999999999999998774
Q ss_pred CCCccccchhhhccCcCCHHHHHHHHHH
Q 010286 145 WEPNQEKKEIRALEDWQTADGLLTWINK 172 (513)
Q Consensus 145 ~~~~~~~~~v~~~~g~~~~e~L~~~i~~ 172 (513)
.+..+.|.++.++|.++|++
T Consensus 108 --------~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 108 --------MLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp --------EEEEESSCCCHHHHHHHHTT
T ss_pred --------EEEEecCCCCHHHHHHHHHh
Confidence 34567899999999999865
No 82
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.66 E-value=5.3e-16 Score=149.61 Aligned_cols=112 Identities=27% Similarity=0.519 Sum_probs=96.4
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
.+..+..++.++|++.+.+. ++++|.|||+||++|+.+.|.|+++++.+.+.. ..+.++.|||+ ++.+++++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~--~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~----~~v~~~~vd~~--~~~~l~~~ 199 (241)
T 3idv_A 128 PPEVTLVLTKENFDEVVNDA--DIILVEFYAPWCGHCKKLAPEYEKAAKELSKRS----PPIPLAKVDAT--AETDLAKR 199 (241)
T ss_dssp CCCSSEECCTTTHHHHHHHC--SEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSS----SCCCEEEEETT--TCHHHHHH
T ss_pred ccccceeccHHHHHHhhccC--CeEEEEEECCCCHHHHHhHHHHHHHHHHHhccC----CcEEEEEEECC--CCHHHHHH
Confidence 34568889999999999764 689999999999999999999999999997532 34899999984 68899999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcccc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~ 177 (513)
|+|+++||+++|++|+. +. |.|.++.++|.+||++++++.
T Consensus 200 ~~v~~~Pt~~~~~~g~~-------------~~-~~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 200 FDVSGYPTLKIFRKGRP-------------YD-YNGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp TTCCSSSEEEEEETTEE-------------EE-CCSCCSHHHHHHHHHHHTTCT
T ss_pred cCCcccCEEEEEECCeE-------------EE-ecCCCCHHHHHHHHHhhhCCC
Confidence 99999999999987732 23 789999999999999998753
No 83
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.65 E-value=2.7e-16 Score=135.15 Aligned_cols=104 Identities=10% Similarity=0.101 Sum_probs=83.0
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--hhcHHHHHH
Q 010286 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--KINTNLCDK 123 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--d~n~~lc~~ 123 (513)
..+..++.++|+..+.+ +++++|+|||+|||+|+.+.|.++++++.+. ..+.++.+|... +.+.+++++
T Consensus 12 ~~~~~~~~~~~~~~~~~--~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~-------~~v~~~~~~~~~~~~~~~~~~~~ 82 (118)
T 1zma_A 12 KDLEVTTVVRAQEALDK--KETATFFIGRKTCPYCRKFAGTLSGVVAETK-------AHIYFINSEEPSQLNDLQAFRSR 82 (118)
T ss_dssp TTSEECCHHHHHHHHHT--TCCEEEEEECTTCHHHHHHHHHHHHHHHHHC-------CCCEEEETTCGGGHHHHHHHHHH
T ss_pred hhhhcCCHHHHHHHHhC--CCeEEEEEECCCCccHHHHHHHHHHHHHhcC-------CeEEEEECCCcCcHHHHHHHHHH
Confidence 34778899999998876 3679999999999999999999999999885 234554333211 345789999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHH
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWIN 171 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~ 171 (513)
|+|+++||+++|++|+. +..+.|.++.++|.+||+
T Consensus 83 ~~i~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 83 YGIPTVPGFVHITDGQI-------------NVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp HTCCSSCEEEEEETTEE-------------EEECCTTCCHHHHHHHHT
T ss_pred cCCCCCCeEEEEECCEE-------------EEEecCCCCHHHHHHHhh
Confidence 99999999999987743 356788999999999885
No 84
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.65 E-value=2.8e-16 Score=133.69 Aligned_cols=103 Identities=17% Similarity=0.265 Sum_probs=85.0
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCC
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~ 127 (513)
+..++.++| +.+.+ +++++|.||++||++|+.+.|.++++++.+. .+.++.||+ +++.+++++|+|+
T Consensus 5 ~~~~~~~~f-~~~~~--~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--------~v~~~~vd~--~~~~~l~~~~~v~ 71 (110)
T 2l6c_A 5 RDITTEAGM-AHFEG--LSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--------QVAISSVDS--EARPELMKELGFE 71 (110)
T ss_dssp SBCGGGCSH-HHHTT--CSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--------TSCEEEEEG--GGCHHHHHHTTCC
T ss_pred eecCCHHHH-HHHHc--CCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--------CcEEEEEcC--cCCHHHHHHcCCc
Confidence 456788999 66654 3789999999999999999999999998763 378999998 4689999999999
Q ss_pred ccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
++||+++|++|+. +..+.|..+.++|.+++.+..++
T Consensus 72 ~~Pt~~~~~~G~~-------------v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 72 RVPTLVFIRDGKV-------------AKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp SSCEEEEEESSSE-------------EEEEESCCCHHHHHHHHHTC---
T ss_pred ccCEEEEEECCEE-------------EEEEcCCCCHHHHHHHHHHHhhh
Confidence 9999999987743 35678889999999999877653
No 85
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.65 E-value=3e-16 Score=140.31 Aligned_cols=111 Identities=11% Similarity=0.129 Sum_probs=85.6
Q ss_pred CcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccce
Q 010286 52 NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPM 131 (513)
Q Consensus 52 ~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PT 131 (513)
+.++|++.+.+..++++||+|||+||++|+.+.|.++++++++. +.+.++.||++ ++.+++++|+|+++||
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~d--~~~~~~~~~~i~~~Pt 80 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVK-------NFAVIYLVDIT--EVPDFNKMYELYDPCT 80 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHT-------TTEEEEEEETT--TCCTTTTSSCSCSSCE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC-------CCeEEEEEccc--cCHHHHHHcCCCCCCE
Confidence 57889987765346899999999999999999999999999985 34999999984 6788999999999999
Q ss_pred EEEecCCcccCCCCCCccccchhhhccCcCC-HHHHHHHHHHhcc
Q 010286 132 LLWGSPSKFVAGSWEPNQEKKEIRALEDWQT-ADGLLTWINKQTS 175 (513)
Q Consensus 132 l~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~-~e~L~~~i~~~l~ 175 (513)
+++|++|+........ .....+.|..+ .++|.++|++.+.
T Consensus 81 ~~~~~~G~~v~~~~g~----~~~~~~~g~~~~~~~l~~~i~~~~~ 121 (142)
T 1qgv_A 81 VMFFFRNKHIMIDLGT----GNNNKINWAMEDKQEMVDIIETVYR 121 (142)
T ss_dssp EEEEETTEEEEEECC----------CCSCCSCHHHHHHHHHHHHH
T ss_pred EEEEECCcEEEEecCC----CCcceeeeecCcHHHHHHHHHHHHH
Confidence 9999888654210000 00123456654 8999999988764
No 86
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.65 E-value=5.2e-16 Score=133.13 Aligned_cols=102 Identities=18% Similarity=0.449 Sum_probs=83.5
Q ss_pred cCcceecCc-ccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 45 VDHAVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 45 ~~~v~~L~~-~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
...+..+++ ++|++.+.+ ++++||.||++||++|+.+.|.++++++.+. + +.++.||+ +++.+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~--~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~-------~-v~~~~vd~--~~~~~l~~~ 78 (114)
T 2oe3_A 11 YTSITKLTNLTEFRNLIKQ--NDKLVIDFYATWCGPCKMMQPHLTKLIQAYP-------D-VRFVKCDV--DESPDIAKE 78 (114)
T ss_dssp GGGSCBCCSHHHHHHHHHH--CSEEEEEEECTTCHHHHHTHHHHHHHHHHCT-------T-SEEEEEET--TTCHHHHHH
T ss_pred hhheeecCCHHHHHHHHhC--CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-------C-CEEEEEEC--CCCHHHHHH
Confidence 344555554 667777765 4789999999999999999999999999985 3 89999998 468899999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHH
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~ 172 (513)
|+|+++||+++|++|+. +..+.|.. .++|.++|++
T Consensus 79 ~~v~~~Pt~~~~~~G~~-------------~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 79 CEVTAMPTFVLGKDGQL-------------IGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp TTCCSBSEEEEEETTEE-------------EEEEESSC-HHHHHHHHHT
T ss_pred CCCCcccEEEEEeCCeE-------------EEEEeCCC-HHHHHHHHHh
Confidence 99999999999987743 34567877 8899998864
No 87
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.65 E-value=4.5e-16 Score=134.95 Aligned_cols=106 Identities=9% Similarity=0.101 Sum_probs=82.1
Q ss_pred cceecCcccHHHHHhcCC-CCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCC
Q 010286 47 HAVELNATNFDAVLRDTP-ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~-~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~ 125 (513)
.+++++.++|.+.+.++. +++++|+|||+||++|+.+.|.++++|+++. .+.|++||++ ++ +.+|+
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~--------~v~f~kvd~d--~~---~~~~~ 70 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP--------ETKFVKAIVN--SC---IQHYH 70 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT--------TSEEEEEEGG--GT---STTCC
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC--------CCEEEEEEhH--Hh---HHHCC
Confidence 477889999999887653 4589999999999999999999999999984 3899999974 33 58999
Q ss_pred CCccceEEEecCCcccCCCCCCccccchhhhcc-CcCCHHHHHHHHHH
Q 010286 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE-DWQTADGLLTWINK 172 (513)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~-g~~~~e~L~~~i~~ 172 (513)
|+++||+++|++|+....- ....... ...+.++|..+|.+
T Consensus 71 v~~~PT~~~fk~G~~v~~~-------~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 71 DNCLPTIFVYKNGQIEAKF-------IGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp GGGCSEEEEEETTEEEEEE-------ESTTTTTCSSCCHHHHHHHHHT
T ss_pred CCCCCEEEEEECCEEEEEE-------eChhhhCCCCCCHHHHHHHHHH
Confidence 9999999999998654310 0001111 13578888888865
No 88
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.64 E-value=4.7e-16 Score=135.13 Aligned_cols=109 Identities=12% Similarity=0.200 Sum_probs=85.1
Q ss_pred ceecCcccHHH---HHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 48 AVELNATNFDA---VLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 48 v~~L~~~~f~~---~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
+..++.++|+. ......++++||+||++||++|+.+.|.++++++.+. +.+.++.||++.+++.+++++|
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~~~d~~~~~~~~~ 78 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-------GKFNIYYARLEEEKNIDLAYKY 78 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-------SSCEEEEEETTSSHHHHHHHHT
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-------CCeEEEEEeCCCCchHHHHHHc
Confidence 44455555540 1122235789999999999999999999999999985 3489999992225688999999
Q ss_pred CCCccceEEEec-CCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 125 SVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 125 ~I~~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
+|.++||+++|. +|+ .+..+.|..+.++|.++|++.++.
T Consensus 79 ~v~~~Pt~~~~~~~G~-------------~~~~~~G~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 79 DANIVPTTVFLDKEGN-------------KFYVHQGLMRKNNIETILNSLGVK 118 (126)
T ss_dssp TCCSSSEEEEECTTCC-------------EEEEEESCCCHHHHHHHHHHHCCC
T ss_pred CCcceeEEEEECCCCC-------------EEEEecCCCCHHHHHHHHHHHhcc
Confidence 999999999997 553 234577889999999999998764
No 89
>3td7_A FAD-linked sulfhydryl oxidase R596; four helix-bundle, orfan domain, oxidoreductase; HET: FAD; 2.21A {Acanthamoeba polyphaga mimivirus}
Probab=99.63 E-value=2.3e-16 Score=152.24 Aligned_cols=74 Identities=15% Similarity=0.386 Sum_probs=68.1
Q ss_pred cHHHHHHHHhhcCCCCCCHHHHHHHHHHhHh---ccCChHHHHHHHHHhcC-C-------CCChhHHHHHHHHhhhhhhh
Q 010286 315 GLWVLLHSLSVRIDDGESQFTFTAVCDFIHN---FFVCEECRQHFYQMCSS-P-------FNKTRDFALWLWSTHNQVNE 383 (513)
Q Consensus 315 glW~l~H~ltv~~~~~~~~~~~~~~~~~v~~---ff~C~~C~~hf~~~~~~-~-------~~~~~~~~lWlw~~HN~VN~ 383 (513)
++|.+||+||++||+.|+......+++||.+ |+||.+||+||.+++.+ + +.||++++.|||.+||.||+
T Consensus 46 stW~fLHTIAa~YPenPT~~dKk~y~~FI~nL~~vLPC~~Cr~HF~k~Lkk~Pv~~~~p~L~SRdsLskWL~~iHN~VNk 125 (295)
T 3td7_A 46 AGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDVLPCRLCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAVNN 125 (295)
T ss_dssp HHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHTTSGGGCCCTTGGGSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999999999999986 69999999999999876 2 56999999999999999999
Q ss_pred hhccc
Q 010286 384 RLMKL 388 (513)
Q Consensus 384 rl~~~ 388 (513)
||++.
T Consensus 126 rLGKP 130 (295)
T 3td7_A 126 KLEVD 130 (295)
T ss_dssp HHTCC
T ss_pred HhCCC
Confidence 99995
No 90
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.63 E-value=1.4e-15 Score=148.49 Aligned_cols=114 Identities=18% Similarity=0.255 Sum_probs=91.9
Q ss_pred ccccCcceecCcccHHHHHhcCCCCeEEEEEe--cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---hh
Q 010286 42 KVEVDHAVELNATNFDAVLRDTPATYAVVEFF--ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---KI 116 (513)
Q Consensus 42 p~~~~~v~~L~~~~f~~~l~~~~~~~vLV~Fy--A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---d~ 116 (513)
|.....++.|++++|++++.. ++++||+|| ||||| ++|.|+++|+.+.++. +.|.|+.|||+. ++
T Consensus 12 ~~~~~~v~~Lt~~nF~~vi~~--~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~----~~v~~akVD~d~~g~~~ 81 (248)
T 2c0g_A 12 SVTCTGCVDLDELSFEKTVER--FPYSVVKFDIASPYGE----KHEAFTAFSKSAHKAT----KDLLIATVGVKDYGELE 81 (248)
T ss_dssp ---CTTCEECCTTTHHHHHTT--SSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHC----SSEEEEEEEECSSTTCT
T ss_pred CCCCCCcEECCHHHHHHHHhc--CCCEEEEEECCCCCCc----cHHHHHHHHHHHhccC----CCeEEEEEECCcccccc
Confidence 345667999999999997744 478999999 99999 9999999999985311 359999999964 12
Q ss_pred cHHHHHHCCCC--ccceEEEecCCcccCCCCCCccccchhhhc--cCcCCHHHHHHHHHHhcccc
Q 010286 117 NTNLCDKFSVG--HYPMLLWGSPSKFVAGSWEPNQEKKEIRAL--EDWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 117 n~~lc~~f~I~--~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~--~g~~~~e~L~~~i~~~l~~~ 177 (513)
++++|++|+|+ +|||+++|+ |+.. .+..| .|.++.+.|.+||+++++..
T Consensus 82 n~~la~~~~V~~~~~PTl~~F~-G~~~-----------~~~~y~~~G~~~~~~L~~fi~~~~~~~ 134 (248)
T 2c0g_A 82 NKALGDRYKVDDKNFPSIFLFK-GNAD-----------EYVQLPSHVDVTLDNLKAFVSANTPLY 134 (248)
T ss_dssp THHHHHHTTCCTTSCCEEEEES-SSSS-----------SEEECCTTSCCCHHHHHHHHHHHSSCC
T ss_pred cHHHHHHhCCCcCCCCeEEEEe-CCcC-----------cceeecccCCCCHHHHHHHHHHhhccc
Confidence 89999999999 999999998 8421 12456 79999999999999998743
No 91
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.63 E-value=8.1e-16 Score=135.96 Aligned_cols=108 Identities=13% Similarity=0.267 Sum_probs=89.1
Q ss_pred cCcceec-CcccHHHHHhcC--CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHH
Q 010286 45 VDHAVEL-NATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC 121 (513)
Q Consensus 45 ~~~v~~L-~~~~f~~~l~~~--~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc 121 (513)
...++.+ +.++|++.+... .+++++|.||++||++|+.+.|.++++++.+. .+.++.||+ +++.+++
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~v~~--~~~~~~~ 92 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--------SLMFLVIDV--DELSDFS 92 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTSHHHH
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CCEEEEEeC--cccHHHH
Confidence 4456666 479999988532 25789999999999999999999999999874 388999998 4689999
Q ss_pred HHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 122 DKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 122 ~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
++|+|+++||+++|++|+. +..+.|. +.++|.++|++.++.
T Consensus 93 ~~~~v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 93 ASWEIKATPTFFFLRDGQQ-------------VDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp HHTTCCEESEEEEEETTEE-------------EEEEESC-CHHHHHHHHHHHHHT
T ss_pred HHcCCCcccEEEEEcCCeE-------------EEEEeCC-CHHHHHHHHHHHhcc
Confidence 9999999999999987743 3456676 889999999988753
No 92
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.63 E-value=9.5e-16 Score=130.93 Aligned_cols=107 Identities=18% Similarity=0.391 Sum_probs=88.5
Q ss_pred Ccceec-CcccHHHHHhcC--CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHH
Q 010286 46 DHAVEL-NATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (513)
Q Consensus 46 ~~v~~L-~~~~f~~~l~~~--~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~ 122 (513)
..++.+ +.++|++.+... .+++++|.||++||++|+.+.|.++++++.+. .+.++.||+ +++.++++
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~--~~~~~~~~ 75 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--------GAIFLKVDV--DELKDVAE 75 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTSHHHHH
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--------CcEEEEEEc--ccCHHHHH
Confidence 456677 579999988752 24789999999999999999999999999974 388999998 46889999
Q ss_pred HCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 123 ~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
+|+|+++||+++|++|+. +..+.| .+.++|.++|++.++.
T Consensus 76 ~~~v~~~Pt~~~~~~g~~-------------~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 76 AYNVEAMPTFLFIKDGEK-------------VDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp HTTCCSBSEEEEEETTEE-------------EEEEES-CCHHHHHHHHHHHHC-
T ss_pred HcCCCcCcEEEEEeCCeE-------------EEEecC-CCHHHHHHHHHHHhcc
Confidence 999999999999987743 344567 5889999999988753
No 93
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.63 E-value=4.5e-16 Score=139.39 Aligned_cols=107 Identities=17% Similarity=0.176 Sum_probs=77.4
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCC--CHHHhhhhHHHHHHHHHhCCCCCCCCCeEE--EEEEeccchhcHHHHH
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANW--CPACRNYKPQYEKVARLFNGPNAAHPGIIL--MTRVDCALKINTNLCD 122 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~W--Cg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~--~~~VDc~~d~n~~lc~ 122 (513)
.+..+++++|++.+.++ +.++|.||++| |++|+.++|.|+++++++ + .+. |+.||+ ++++++++
T Consensus 18 ~~~~l~~~~f~~~i~~~--~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-------~v~~~~~~Vd~--d~~~~la~ 85 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRV--GDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-------QFDWQVAVADL--EQSEAIGD 85 (142)
T ss_dssp TCEECCCC--------C--CSEEEEECCCSCC----CCHHHHHHHHHHTC-T-------TSCCEEEEECH--HHHHHHHH
T ss_pred cCcccccccHHHHHHhC--CCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-------ccceeEEEEEC--CCCHHHHH
Confidence 57889999999998764 44789999988 999999999999999987 3 266 999998 56899999
Q ss_pred HCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccccC
Q 010286 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (513)
Q Consensus 123 ~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~~ 178 (513)
+|+|+++||+++|++|+. +.++.|.++.++|.++|++.+....
T Consensus 86 ~~~V~~iPT~~~fk~G~~-------------v~~~~G~~~~~~l~~~i~~~l~~~~ 128 (142)
T 2es7_A 86 RFNVRRFPATLVFTDGKL-------------RGALSGIHPWAELLTLMRSIVDTPA 128 (142)
T ss_dssp TTTCCSSSEEEEESCC-----------------CEESCCCHHHHHHHHHHHHC---
T ss_pred hcCCCcCCeEEEEeCCEE-------------EEEEeCCCCHHHHHHHHHHHhcccc
Confidence 999999999999988743 3567899999999999999886543
No 94
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.63 E-value=1.1e-15 Score=129.49 Aligned_cols=105 Identities=20% Similarity=0.471 Sum_probs=87.6
Q ss_pred cceec-CcccHHHHHhcC--CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 47 HAVEL-NATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 47 ~v~~L-~~~~f~~~l~~~--~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
.++.+ +.++|++.+... .+++++|.||++||++|+.+.|.++++++.+. .+.++.||+ +++.+++++
T Consensus 5 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~v~~~~v~~--~~~~~~~~~ 74 (113)
T 1ti3_A 5 QVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--------NVTFLKVDV--DELKAVAEE 74 (113)
T ss_dssp CEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--------SEEEEEEET--TTCHHHHHH
T ss_pred ceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--------CcEEEEEEc--cccHHHHHh
Confidence 46666 679999988752 36889999999999999999999999999874 399999998 468899999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
|+|.++||+++|++|+. +..+.| .+.++|.++|++.+.
T Consensus 75 ~~v~~~Pt~~~~~~G~~-------------~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 75 WNVEAMPTFIFLKDGKL-------------VDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp HHCSSTTEEEEEETTEE-------------EEEEEC-CCTTHHHHHHHHHHH
T ss_pred CCCCcccEEEEEeCCEE-------------EEEEec-CCHHHHHHHHHHhhc
Confidence 99999999999987743 344566 588899999988763
No 95
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.62 E-value=1.8e-15 Score=133.81 Aligned_cols=104 Identities=9% Similarity=0.137 Sum_probs=84.6
Q ss_pred cCcceecCcccHHHHHhcC-CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 45 VDHAVELNATNFDAVLRDT-PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~-~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
...++.++.++|++.+.+. .++++||+|||+||++|+.+.|.|+++++.+. .+.|+.||++. +. ++
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--------~v~~~~vd~~~--~~---~~ 75 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--------ETKFVKAIVNS--CI---EH 75 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--------SEEEEEECCSS--SC---SS
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--------CcEEEEEEhhc--Cc---cc
Confidence 4558888999999998764 34789999999999999999999999999874 38999999853 22 78
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCc-------CCHHHHHHHHHHhc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW-------QTADGLLTWINKQT 174 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~-------~~~e~L~~~i~~~l 174 (513)
|+|+++||+++|.+|+.. ..+.|. .+.++|..+|.++-
T Consensus 76 ~~i~~~Pt~~~~~~G~~v-------------~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 76 YHDNCLPTIFVYKNGQIE-------------GKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp CCSSCCSEEEEESSSSCS-------------EEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred CCCCCCCEEEEEECCEEE-------------EEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 999999999999888543 233343 37899999998763
No 96
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.62 E-value=1.1e-15 Score=157.13 Aligned_cols=111 Identities=22% Similarity=0.457 Sum_probs=92.4
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
....+..|++++|++.+.+. +++++|+|||||||||+++.|.|+++++.+++. ..+.++.|||+. +. |++
T Consensus 247 ~~~~v~~l~~~~f~~~~~~~-~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~-----~~v~~~~vd~~~--~~--~~~ 316 (361)
T 3uem_A 247 DKQPVKVLVGKNFEDVAFDE-KKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH-----ENIVIAKMDSTA--NE--VEA 316 (361)
T ss_dssp TTSSSEEECTTTHHHHHTCT-TCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTC-----SSEEEEEEETTT--CB--CSS
T ss_pred ccCCcEEeecCchhhhcccC-CCcEEEEEecCcCHhHHHHHHHHHHHHHHhccC-----CcEEEEEEECCc--cc--hhh
Confidence 34568999999999998654 578999999999999999999999999999743 359999999964 22 789
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
|+|+++||+++|++|. +..+..|.|.++.++|.+||+++..
T Consensus 317 ~~v~~~Pt~~~~~~~~-----------~~~~~~~~G~~~~~~l~~~l~~~~~ 357 (361)
T 3uem_A 317 VKVHSFPTLKFFPASA-----------DRTVIDYNGERTLDGFKKFLESGGQ 357 (361)
T ss_dssp CCCCSSSEEEEECSSS-----------SCCCEECCSCSSHHHHHHHHTTTSC
T ss_pred cCCcccCeEEEEECCC-----------CcceeEecCCCCHHHHHHHHHhcCC
Confidence 9999999999997651 1234578899999999999987753
No 97
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=8.3e-16 Score=134.06 Aligned_cols=109 Identities=22% Similarity=0.379 Sum_probs=89.0
Q ss_pred ceecCcccHHHHHhc--CCCCeEEEEEecCCCHHHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHH
Q 010286 48 AVELNATNFDAVLRD--TPATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (513)
Q Consensus 48 v~~L~~~~f~~~l~~--~~~~~vLV~FyA~WCg~Ck~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~ 122 (513)
.+.++..+|++.+.. ..++++||+||++||++|+.+.|.+ +++++.++ ..+.++.||++.+.+.++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~-------~~~~~~~vd~~~~~~~~~~~ 80 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFN-------RHFVNLKMDMEKGEGVELRK 80 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHH-------HHSEEEEECSSSTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHh-------cCeEEEEEecCCcchHHHHH
Confidence 456688899887742 1257899999999999999999999 77777764 35788999996556889999
Q ss_pred HCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 123 KFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 123 ~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
+|+|.++||+++| ++|+ .+..+.|..+.++|.++|++.+++
T Consensus 81 ~~~v~~~Pt~~~~d~~G~-------------~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 81 KYGVHAYPTLLFINSSGE-------------VVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp HTTCCSSCEEEEECTTSC-------------EEEEEESCCCHHHHHHHHHHHHSC
T ss_pred HcCCCCCCEEEEECCCCc-------------EEEEecCCCCHHHHHHHHHHHHHh
Confidence 9999999999999 4553 234577889999999999998764
No 98
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.61 E-value=9.6e-16 Score=132.62 Aligned_cols=104 Identities=17% Similarity=0.386 Sum_probs=85.9
Q ss_pred cceecCc-ccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCC
Q 010286 47 HAVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (513)
Q Consensus 47 ~v~~L~~-~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~ 125 (513)
.+..+++ ++|++.+.+ +++++|.||++||++|+.+.|.++++++.+.+ ..+.++.||+ +++.+++++|+
T Consensus 16 ~~~~i~~~~~f~~~l~~--~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~------~~v~~~~vd~--d~~~~~~~~~~ 85 (121)
T 2j23_A 16 SVQVISSYDQFKQVTGG--DKVVVIDFWATWCGPCKMIGPVFEKISDTPAG------DKVGFYKVDV--DEQSQIAQEVG 85 (121)
T ss_dssp CEEECCSHHHHHHHHSS--SSCEEEEEECTTCSTHHHHHHHHHHHHTSTHH------HHSEEEEEET--TTCHHHHHHHT
T ss_pred ceEEcCCHHHHHHHHcC--CCEEEEEEECCCCHhHHHHHHHHHHHHHHCcC------CcEEEEEEEC--cCCHHHHHHcC
Confidence 3555554 899999843 57899999999999999999999999988752 1289999998 46889999999
Q ss_pred CCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
|.++||+++|++|+. +..+.|. +.++|.++|++.+
T Consensus 86 v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 86 IRAMPTFVFFKNGQK-------------IDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp CCSSSEEEEEETTEE-------------EEEEESS-CHHHHHHHHHHHT
T ss_pred CCcccEEEEEECCeE-------------EeeEcCC-CHHHHHHHHHHhh
Confidence 999999999987743 3456777 8999999998765
No 99
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.61 E-value=2.6e-15 Score=132.34 Aligned_cols=107 Identities=11% Similarity=0.303 Sum_probs=87.1
Q ss_pred ecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEeccc--hhcHHHHHHC
Q 010286 50 ELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCAL--KINTNLCDKF 124 (513)
Q Consensus 50 ~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~~--d~n~~lc~~f 124 (513)
..+.++|+..+.+.+++++||+|||+||++|+.+.|.+ .++++.+. .+.++.||++. +.+.+++++|
T Consensus 16 ~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--------~~~~~~vd~~~~~~~~~~l~~~~ 87 (134)
T 2fwh_A 16 IKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--------DTVLLQANVTANDAQDVALLKHL 87 (134)
T ss_dssp CCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--------TSEEEEEECTTCCHHHHHHHHHT
T ss_pred ecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--------CcEEEEEeCCCCcchHHHHHHHc
Confidence 44568888888765568999999999999999999999 99999885 28899999854 5678999999
Q ss_pred CCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 125 SVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 125 ~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+|.++||+++| ++|++.. ...+.|..+.++|.++|++.-+
T Consensus 88 ~v~~~Pt~~~~d~~G~~v~-----------~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 88 NVLGLPTILFFDGQGQEHP-----------QARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp TCCSSSEEEEECTTSCBCG-----------GGCBCSCCCHHHHHHHHHHC--
T ss_pred CCCCCCEEEEECCCCCEee-----------eeeeeeccCHHHHHHHHHhcCc
Confidence 99999999999 6664321 1457899999999999987644
No 100
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.60 E-value=2.1e-15 Score=130.08 Aligned_cols=109 Identities=19% Similarity=0.340 Sum_probs=84.2
Q ss_pred cceec--CcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 47 HAVEL--NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 47 ~v~~L--~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
.++.+ +.++|++.+.++ ++++||.||++||++|+.+.|.++++++.+. .+.++.||+ +++.+++++|
T Consensus 4 ~v~~~~g~~~~~~~~~~~~-~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--~~~~~~~~~~ 72 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEA-PGLVLVDFFATWCGPCQRLGQILPSIAEANK--------DVTFIKVDV--DKNGNAADAY 72 (118)
T ss_dssp CSEEECSCHHHHHHHHHHC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTCHHHHHHT
T ss_pred cceEecCCHHHHHHHHHhC-CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CeEEEEEEC--CCCHHHHHhc
Confidence 45666 578898766553 4789999999999999999999999999872 389999998 4689999999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
+|.++||+++|.++. . ++..+..+.|.. .++|.+.|.++..+
T Consensus 73 ~i~~~Pt~~~~~~~~-~--------~G~~~~~~~G~~-~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 73 GVSSIPALFFVKKEG-N--------EIKTLDQFVGAD-VSRIKADIEKFKHH 114 (118)
T ss_dssp TCCSSSEEEEEEEET-T--------EEEEEEEEESCC-HHHHHHHHHHHC--
T ss_pred CCCCCCEEEEEeCCC-C--------cceEEEeecCCC-HHHHHHHHHHhhhc
Confidence 999999999997610 0 113445667755 45699999887653
No 101
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.60 E-value=3e-15 Score=159.79 Aligned_cols=128 Identities=17% Similarity=0.439 Sum_probs=103.1
Q ss_pred hccCCCcccc-ccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEec
Q 010286 34 RSLGDTEKKV-EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC 112 (513)
Q Consensus 34 ~~~~~~~~p~-~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc 112 (513)
+.+.+++.|. ....+..+++++|++.+.+. ++++||+|||+|||||++++|.|+++++.+.+. ..+.++.||+
T Consensus 339 ~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~-~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-----~~v~~~~id~ 412 (481)
T 3f8u_A 339 RYLKSEPIPESNDGPVKVVVAENFDEIVNNE-NKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKD-----PNIVIAKMDA 412 (481)
T ss_dssp CCCCCCCCCSCCCSSSEEECTTTHHHHHTCT-TCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTC-----SSEEEEEEET
T ss_pred cccccCCCCCCCCCCeEEecccCHHHHhhcC-CCcEEEEEecCcChhHHHhhHHHHHHHHHhccC-----CCEEEEEEEC
Confidence 3344444443 34568899999999998764 588999999999999999999999999999743 2599999998
Q ss_pred cchhcHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccccCCCC
Q 010286 113 ALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSYGLD 181 (513)
Q Consensus 113 ~~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~~~l~ 181 (513)
+ .+ +++.+|+|.++||+++|++|... .+..+.|.++.++|.+||++++.....+.
T Consensus 413 ~--~~-~~~~~~~v~~~Pt~~~~~~~~~~-----------~~~~~~G~~~~~~l~~~l~~~~~~~~~~~ 467 (481)
T 3f8u_A 413 T--AN-DVPSPYEVRGFPTIYFSPANKKL-----------NPKKYEGGRELSDFISYLQREATNPPVIQ 467 (481)
T ss_dssp T--SS-CCCTTCCCCSSSEEEEECTTCTT-----------SCEECCSCCSHHHHHHHHHHHCSSCCCCC
T ss_pred C--ch-hhHhhCCCcccCEEEEEeCCCeE-----------eeeEeCCCCCHHHHHHHHHHhcCCccccc
Confidence 5 34 79999999999999999876321 13568899999999999999987655443
No 102
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.37 E-value=1.2e-16 Score=133.24 Aligned_cols=103 Identities=24% Similarity=0.488 Sum_probs=86.7
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCC
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~ 127 (513)
++.++.++|++.+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++|+|.
T Consensus 3 v~~l~~~~~~~~~~~~-~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~~--~~~~~~~~~~v~ 72 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKS-DKPVLVDFWAPWCGPCRMIAPIIEELAKEYE-------GKVKVVKVNVD--ENPNTAAQYGIR 72 (106)
Confidence 6788999999777543 4789999999999999999999999999885 35899999984 678999999999
Q ss_pred ccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHh
Q 010286 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (513)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~ 173 (513)
++||+++|++|+. +..+.|..+.++|.++|++.
T Consensus 73 ~~Pt~~~~~~g~~-------------~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 73 SIPTLLLFKNGQV-------------VDRLVGAQPKEALKERIDKH 105 (106)
Confidence 9999999877633 34567888889999888764
No 103
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.58 E-value=8.3e-15 Score=142.42 Aligned_cols=108 Identities=17% Similarity=0.332 Sum_probs=91.0
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEec--CCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---hhcHH
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFA--NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---KINTN 119 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA--~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---d~n~~ 119 (513)
.+.|+.|++++|++.+.. ++++||+||| |||| ++|.|+++|+.+.+. +.|.|+.|||+. +.+++
T Consensus 4 ~~~v~~Lt~~nF~~~i~~--~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~-----~~v~~akVDvd~~g~~~~~~ 72 (240)
T 2qc7_A 4 TKGALPLDTVTFYKVIPK--SKFVLVKFDTQYPYGE----KQDEFKRLAENSASS-----DDLLVAEVGISDYGDKLNME 72 (240)
T ss_dssp CTTCEECCTTHHHHHGGG--CSEEEEEECCSSCCSH----HHHHHHHHHHHHTTC-----TTEEEEEECCCCSSSCCSHH
T ss_pred CCCceECCHHHHHHHHcC--CCCEEEEEeCCCCCCc----chHHHHHHHHHhcCC-----CCeEEEEEeCCcccchhhHH
Confidence 346899999999998865 3789999999 9999 999999999999742 359999999642 35899
Q ss_pred HHHHCCCC--ccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 120 LCDKFSVG--HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 120 lc~~f~I~--~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+|++|+|+ +|||+++|++|+.. .+..|.|.++.+.|.+||++++
T Consensus 73 l~~~~~V~~~~~PTl~~f~~G~~~-----------~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 73 LSEKYKLDKESYPVFYLFRDGDFE-----------NPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp HHHHTTCCGGGCSEEEEEETTCSS-----------CCEECCSCSCHHHHHHHHHHTT
T ss_pred HHHHcCCCCCCCCEEEEEeCCCcC-----------cceeecCCCCHHHHHHHHHHhc
Confidence 99999999 99999999987420 1346889999999999999886
No 104
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.57 E-value=1.9e-15 Score=170.87 Aligned_cols=112 Identities=16% Similarity=0.320 Sum_probs=89.7
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHH
Q 010286 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (513)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~ 122 (513)
...+.|+.|+.++|++.+.. ++++||+|||+||+||++++|.|+++++.+. +.+.+++|||+ +++++|+
T Consensus 113 ~~~~~v~~l~~~~f~~~i~~--~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~-------~~v~~~~vd~~--~~~~l~~ 181 (780)
T 3apo_A 113 DDDPEIITLERREFDAAVNS--GELWFVNFYSPGSSHSHDLAPTWREFAKEVD-------GLLRIGAVNCG--DDRMLCR 181 (780)
T ss_dssp TTCTTEEECCHHHHHHHHTS--SSCEEEEEECSSCHHHHHHHHHHHHHHHHTT-------TTSEEEEEETT--TCSSCC-
T ss_pred CCCcceeeechHhHHhhhcC--CCcEEEEEeCCCCcchhHhhHHHHHHHHHhc-------CceEEEEEeCC--CcHHHHH
Confidence 34567999999999999944 4789999999999999999999999999986 34999999995 5688999
Q ss_pred HCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccccC
Q 010286 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (513)
Q Consensus 123 ~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~~ 178 (513)
+|+|+++||+++|++|+. +..|.|.++.+.|.+||.++++..+
T Consensus 182 ~~~v~~~Pt~~~~~~g~~-------------~~~~~G~~~~~~l~~~l~~~~~~~~ 224 (780)
T 3apo_A 182 MKGVNSYPSLFIFRSGMA-------------AVKYNGDRSKESLVAFAMQHVRSTV 224 (780)
T ss_dssp -------CEEEEECTTSC-------------CEECCSCSCHHHHHHHHHTTSCCCE
T ss_pred HcCCceeeeEEEEeCCcE-------------eeEecCCCCHHHHHHHHHHhchhhh
Confidence 999999999999988742 3568899999999999999887654
No 105
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.56 E-value=1.1e-14 Score=139.21 Aligned_cols=108 Identities=16% Similarity=0.132 Sum_probs=86.8
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCC
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~ 127 (513)
+..+++++|+.+... .+..++|.|||+|||+|+.+.|.|+++++.+.+.+ .+.+.++.||++ ++.+++++|+|+
T Consensus 118 ~~~l~~~~~~~~~~~-~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~---~~~v~~~~vd~~--~~~~l~~~~~v~ 191 (226)
T 1a8l_A 118 ETNLMDETKQAIRNI-DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAG---KGKILGDMVEAI--EYPEWADQYNVM 191 (226)
T ss_dssp CCCCCHHHHHHHTTC-CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTT---CCCEEEEEEEGG--GCHHHHHHTTCC
T ss_pred CCCCCHHHHHHHHhc-CCCcEEEEEeCCCCCccHHHHHHHHHHHHhccccc---CCcEEEEEEEcc--cCHHHHHhCCCc
Confidence 456777888776543 23334999999999999999999999999985210 025999999984 689999999999
Q ss_pred ccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
++||+++|++|+ .+..+.|.++.++|.++|++.+
T Consensus 192 ~~Pt~~~~~~G~-------------~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 192 AVPKIVIQVNGE-------------DRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp SSCEEEEEETTE-------------EEEEEESCCCHHHHHHHHHHHH
T ss_pred ccCeEEEEeCCc-------------eeEEEcCCCCHHHHHHHHHHhh
Confidence 999999998773 2356789999999999998865
No 106
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.54 E-value=1.3e-14 Score=155.83 Aligned_cols=113 Identities=19% Similarity=0.420 Sum_probs=91.9
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
...+..|++++|+..+.+. ++++||+|||||||||+.++|.|+++++.+.... ..+.++.||++. +. +.. |
T Consensus 357 ~~~v~~l~~~~f~~~v~~~-~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~----~~v~~~~vd~~~--~~-~~~-~ 427 (504)
T 2b5e_A 357 DSSVFQLVGKNHDEIVNDP-KKDVLVLYYAPWCGHCKRLAPTYQELADTYANAT----SDVLIAKLDHTE--ND-VRG-V 427 (504)
T ss_dssp SCSEEEECTTTHHHHHHCT-TCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHC----SSCEEEEEEGGG--CC-CSS-C
T ss_pred cccceecccccHHHhhccC-CCCEEEEEECCCChhHHHHhHHHHHHHHHhhccC----CcEEEEEecCCc--cc-ccc-C
Confidence 4578999999999998764 4789999999999999999999999999986211 358999999853 33 334 9
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcccc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~ 177 (513)
+|+++||+++|++|+.. .+..|.|.++.++|.+||++++...
T Consensus 428 ~v~~~Pt~~~~~~G~~~-----------~~~~~~G~~~~~~l~~~i~~~~~~~ 469 (504)
T 2b5e_A 428 VIEGYPTIVLYPGGKKS-----------ESVVYQGSRSLDSLFDFIKENGHFD 469 (504)
T ss_dssp CCSSSSEEEEECCTTSC-----------CCCBCCSCCCHHHHHHHHHHHCTTC
T ss_pred CceecCeEEEEeCCcee-----------cceEecCCCCHHHHHHHHHhcCCCC
Confidence 99999999999887431 1356789999999999999987644
No 107
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.54 E-value=1.2e-14 Score=126.14 Aligned_cols=105 Identities=13% Similarity=0.186 Sum_probs=84.0
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecC-------CCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-----
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFAN-------WCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----- 114 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~-------WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----- 114 (513)
.+...+.++|++.+.+..+++++|+|||+ ||++|+.+.|.++++++.+. +.+.++.||++.
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~-------~~~~~~~vd~~~~~~~~ 78 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHIS-------EGCVFIYCQVGEKPYWK 78 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCC-------TTEEEEEEECCCHHHHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcC-------CCcEEEEEECCCchhhh
Confidence 46677889999999875578999999999 99999999999999998875 359999999842
Q ss_pred hhcHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHH
Q 010286 115 KINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (513)
Q Consensus 115 d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~ 172 (513)
+.+.+++++|+|+++||+++|.++.. +..+.| .+.+.|.++|++
T Consensus 79 d~~~~~~~~~~i~~~Pt~~~~~~~~~-------------~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 79 DPNNDFRKNLKVTAVPTLLKYGTPQK-------------LVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp CTTCHHHHHHCCCSSSEEEETTSSCE-------------EEGGGG-GCHHHHHHHHHC
T ss_pred chhHHHHHHCCCCeeCEEEEEcCCce-------------Eecccc-CCHHHHHHHHhc
Confidence 35778999999999999999876421 112222 567888888864
No 108
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.53 E-value=1.4e-14 Score=127.02 Aligned_cols=100 Identities=19% Similarity=0.305 Sum_probs=78.8
Q ss_pred ccHHHHHhc--CCCCeEEEEEecCCCHHHhhhhHHHH--HHHHHhCCCCCCCCCeEEEEEEeccc-hhcHHHHHHCCC--
Q 010286 54 TNFDAVLRD--TPATYAVVEFFANWCPACRNYKPQYE--KVARLFNGPNAAHPGIILMTRVDCAL-KINTNLCDKFSV-- 126 (513)
Q Consensus 54 ~~f~~~l~~--~~~~~vLV~FyA~WCg~Ck~~~P~~~--~lA~~~~~~~~~~~~~v~~~~VDc~~-d~n~~lc~~f~I-- 126 (513)
.++++.+.. ..++++||+|||+||++|+.+.|.++ ++++.++ +.+.++.||++. +++.+++++|+|
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~-------~~~~~~~vd~~~~~~~~~l~~~~~v~~ 88 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIA-------KHFEVVKIDVGNFDRNLELSQAYGDPI 88 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHH-------HHCEEEEEECTTTTSSHHHHHHTTCGG
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhc-------CCEEEEEEeCCcccchHHHHHHhCCcc
Confidence 455555532 22588999999999999999999999 9999885 358999999832 468899999999
Q ss_pred -CccceEEEe-cCCcccCCCCCCccccchhhhccC-------cCCHHHHHHHHHHh
Q 010286 127 -GHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALED-------WQTADGLLTWINKQ 173 (513)
Q Consensus 127 -~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g-------~~~~e~L~~~i~~~ 173 (513)
.++||+++| ++|+.. ..+.| ..+.+++.+||++.
T Consensus 89 ~~~~Pt~~~~d~~G~~~-------------~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 89 QDGIPAVVVVNSDGKVR-------------YTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp GGCSSEEEEECTTSCEE-------------EECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred CCccceEEEECCCCCEE-------------EEecCCcccccccCCHHHHHHHHHHh
Confidence 999999999 677543 22333 57889999998764
No 109
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.52 E-value=2.6e-15 Score=130.64 Aligned_cols=108 Identities=21% Similarity=0.396 Sum_probs=88.5
Q ss_pred cCcceec-CcccHHHHHhcC--CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHH
Q 010286 45 VDHAVEL-NATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC 121 (513)
Q Consensus 45 ~~~v~~L-~~~~f~~~l~~~--~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc 121 (513)
...++.+ +.++|++.+... .+++++|.||++||++|+.+.|.++++++.+. .+.++.||+ +++.+++
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~v~~~~v~~--~~~~~~~ 82 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--------GAVFLKVDV--DELKEVA 82 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--------TBCCEECCT--TTSGGGH
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--------CCEEEEEec--cchHHHH
Confidence 3456777 468999988752 35789999999999999999999999999974 378999998 4678999
Q ss_pred HHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 122 DKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 122 ~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
++|+|+++||+++|++|+.. ..+.| .+.++|.++|++.+..
T Consensus 83 ~~~~v~~~Pt~~~~~~g~~~-------------~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 83 EKYNVEAMPTFLFIKDGAEA-------------DKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp HHHTCCSSCCCCBCTTTTCC-------------BCCCT-TCTTTHHHHHHHHTSS
T ss_pred HHcCCCccceEEEEeCCeEE-------------EEEeC-CCHHHHHHHHHHHHhc
Confidence 99999999999998777432 34566 5788999999988753
No 110
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.52 E-value=6.7e-15 Score=141.10 Aligned_cols=104 Identities=18% Similarity=0.300 Sum_probs=85.5
Q ss_pred Ccceec-CcccHHHHHhcC-CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 46 DHAVEL-NATNFDAVLRDT-PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 46 ~~v~~L-~~~~f~~~l~~~-~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
..|..+ +.++|.+.+.+. +++++||.|||+||++|+.+.|.|+++++.+. .+.|+.||++ +++++.+
T Consensus 99 g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--------~v~f~~vd~~---~~~l~~~ 167 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--------MVKFCKIRAS---NTGAGDR 167 (217)
T ss_dssp CSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--------TSEEEEEEHH---HHTCSTT
T ss_pred CeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--------CeEEEEEECC---cHHHHHH
Confidence 457788 889999998754 35789999999999999999999999999874 3899999984 7789999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccCcC-------CHHHHHHHHHHh
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQ-------TADGLLTWINKQ 173 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~-------~~e~L~~~i~~~ 173 (513)
|+|.++||+++|++|+.. ..+.|.. +.++|..+|.++
T Consensus 168 ~~i~~~PTl~~~~~G~~v-------------~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 168 FSSDVLPTLLVYKGGELI-------------SNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp SCGGGCSEEEEEETTEEE-------------EEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEECCEEE-------------EEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999999999999988543 2334433 358899998764
No 111
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.50 E-value=2.3e-14 Score=139.62 Aligned_cols=110 Identities=15% Similarity=0.208 Sum_probs=86.2
Q ss_pred Ccceec-CcccHHHHHhc-CCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 46 DHAVEL-NATNFDAVLRD-TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 46 ~~v~~L-~~~~f~~~l~~-~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
..|+.+ +.++|.+.+.+ ..+++|||.|||+||++|+.+.|.|+++|+.+. .+.|+.||++ . .+++.+
T Consensus 112 G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--------~v~f~kVd~d--~-~~l~~~ 180 (245)
T 1a0r_P 112 GFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP--------MVKFCKIKAS--N-TGAGDR 180 (245)
T ss_dssp CSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--------TSEEEEEEHH--H-HCCTTS
T ss_pred CeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--------CCEEEEEeCC--c-HHHHHH
Confidence 467888 78999999965 346899999999999999999999999999985 2899999984 2 679999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhccC-cCCHHHHHHHHHHh
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED-WQTADGLLTWINKQ 173 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g-~~~~e~L~~~i~~~ 173 (513)
|+|.++||+++|++|+....- .......| .++.+.|..+|.++
T Consensus 181 ~~I~~~PTll~~~~G~~v~~~-------vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 181 FSSDVLPTLLVYKGGELLSNF-------ISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp SCTTTCSEEEEEETTEEEEEE-------TTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEECCEEEEEE-------eCCcccccccccHHHHHHHHHHc
Confidence 999999999999988654210 00111112 25778899998775
No 112
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.48 E-value=3.9e-14 Score=113.61 Aligned_cols=83 Identities=17% Similarity=0.253 Sum_probs=70.9
Q ss_pred CeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccceEEEecCCcccCCCC
Q 010286 66 TYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSW 145 (513)
Q Consensus 66 ~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~ 145 (513)
.+++|.||++||++|+.+.|.++++++++. +.+.++.||++ ++.+++++|+|+++||+++ +|+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~--~G~~----- 66 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP-------DAVEVEYINVM--ENPQKAMEYGIMAVPTIVI--NGDV----- 66 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS-------SSEEEEEEESS--SSCCTTTSTTTCCSSEEEE--TTEE-----
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC-------CceEEEEEECC--CCHHHHHHCCCcccCEEEE--CCEE-----
Confidence 457999999999999999999999999985 35999999984 5678999999999999988 5521
Q ss_pred CCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 146 EPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 146 ~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
.+.|..+.++|.++|++.+
T Consensus 67 ----------~~~G~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 67 ----------EFIGAPTKEALVEAIKKRL 85 (85)
T ss_dssp ----------ECCSSSSSHHHHHHHHHHC
T ss_pred ----------eeecCCCHHHHHHHHHHhC
Confidence 4677788999999998753
No 113
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.21 E-value=3.3e-15 Score=130.37 Aligned_cols=94 Identities=16% Similarity=0.315 Sum_probs=77.9
Q ss_pred CCeEEEEEecCCCHHHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccceEEEec--CCc
Q 010286 65 ATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGS--PSK 139 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PTl~~f~--~g~ 139 (513)
++++||+|||+||++|+.+.|.+ +++++.+. +.+.++.||++.+++.+++++|+|+++||+++|. +|+
T Consensus 19 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~-------~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~ 91 (130)
T 2lst_A 19 GRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLE-------ARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGA 91 (130)
Confidence 57899999999999999999999 88888775 3588999999766788999999999999999984 443
Q ss_pred ccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 140 FVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 140 ~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
. ..+..+.|..+.++|.++|++.++.
T Consensus 92 ~-----------~~~~~~~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 92 W-----------EEVGRLFGSRPRAEFLKELRQVCVK 117 (130)
Confidence 2 0035677888999999999887753
No 114
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.46 E-value=1.8e-13 Score=131.24 Aligned_cols=102 Identities=15% Similarity=0.184 Sum_probs=84.9
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCC
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I 126 (513)
.+..+++++|+..+.. .+..++|.|||+||++|+.+.|.++++++.+. .+.++.||++ ++.+++++|+|
T Consensus 119 ~~~~l~~~~~~~~~~~-~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--------~v~~~~vd~~--~~~~l~~~~~v 187 (229)
T 2ywm_A 119 RKPQLSEKTLELLQVV-DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--------YITSKVIDAS--ENQDLAEQFQV 187 (229)
T ss_dssp TCCSCCHHHHHHHTTC-CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--------TEEEEEEEGG--GCHHHHHHTTC
T ss_pred CccCCCHHHHHHHHhc-CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--------CeEEEEEECC--CCHHHHHHcCC
Confidence 4567888999887743 23445889999999999999999999999973 4999999984 68999999999
Q ss_pred CccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 127 ~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+++||+++ +|+ +..+.|.++.++|.++|++.++
T Consensus 188 ~~~Pt~~~--~G~--------------~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 188 VGVPKIVI--NKG--------------VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp CSSSEEEE--GGG--------------TEEEESCCCHHHHHHHHHHHHH
T ss_pred cccCEEEE--CCE--------------EEEeeCCCCHHHHHHHHHHHhh
Confidence 99999988 442 3457899999999999998764
No 115
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.46 E-value=4.9e-14 Score=113.05 Aligned_cols=81 Identities=14% Similarity=0.233 Sum_probs=69.8
Q ss_pred EEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccceEEEecCCcccCCCCCC
Q 010286 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEP 147 (513)
Q Consensus 68 vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~ 147 (513)
.+|.||++||++|+.+.|.++++++++. +.+.++.||++ ++.+++++|+|+++||+++ +|+.
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~--~G~~------- 65 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFG-------DKIDVEKIDIM--VDREKAIEYGLMAVPAIAI--NGVV------- 65 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHC-------SSCCEEEECTT--TCGGGGGGTCSSCSSEEEE--TTTE-------
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhc-------CCeEEEEEECC--CCHHHHHhCCceeeCEEEE--CCEE-------
Confidence 5899999999999999999999999986 35889999984 6788999999999999988 5521
Q ss_pred ccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 148 NQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 148 ~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
.+.|..+.++|.++|++.+
T Consensus 66 --------~~~G~~~~~~l~~~l~~~l 84 (85)
T 1nho_A 66 --------RFVGAPSREELFEAINDEM 84 (85)
T ss_dssp --------EEECSSCCHHHHHHHHHHC
T ss_pred --------EEccCCCHHHHHHHHHHHh
Confidence 4677788999999998765
No 116
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.45 E-value=6.9e-14 Score=128.28 Aligned_cols=106 Identities=13% Similarity=0.219 Sum_probs=79.3
Q ss_pred ceecCcccHHHHHh--cCCCCeEEEEEecCCCHHHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEeccchhcHHH--
Q 010286 48 AVELNATNFDAVLR--DTPATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINTNL-- 120 (513)
Q Consensus 48 v~~L~~~~f~~~l~--~~~~~~vLV~FyA~WCg~Ck~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~l-- 120 (513)
....+..+|++.+. ..+++++||+|||+||++|+.+.+.+ .++.+.++ +.+.++.||++. +.++
T Consensus 28 ~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~-------~~~~~v~v~~d~--~~~~~~ 98 (172)
T 3f9u_A 28 EVHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIIN-------NDYVLITLYVDN--KTPLTE 98 (172)
T ss_dssp CCCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHH-------HHCEEEEEETTC--CCEEEE
T ss_pred ccccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-------CCEEEEEEecCc--ccccch
Confidence 34566778888774 22368999999999999999985554 56666554 248899999853 2222
Q ss_pred ------------------------HHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCC-HHHHHHHHHHhc
Q 010286 121 ------------------------CDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQT-ADGLLTWINKQT 174 (513)
Q Consensus 121 ------------------------c~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~-~e~L~~~i~~~l 174 (513)
+++|+|.++||++++ ++|++. ..+.|..+ .+++.++|++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~-------------~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 99 PVKIMENGTERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPL-------------NKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEEETTEEEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBS-------------SCCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhcchhhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEE-------------eeccCCCCCHHHHHHHHHHHH
Confidence 789999999999999 566433 44568888 999999998876
Q ss_pred c
Q 010286 175 S 175 (513)
Q Consensus 175 ~ 175 (513)
.
T Consensus 166 ~ 166 (172)
T 3f9u_A 166 E 166 (172)
T ss_dssp H
T ss_pred H
Confidence 4
No 117
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.45 E-value=1.8e-14 Score=122.36 Aligned_cols=75 Identities=16% Similarity=0.375 Sum_probs=61.3
Q ss_pred CeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch----hcHHHHHHCCCCccceEEEecCCccc
Q 010286 66 TYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----INTNLCDKFSVGHYPMLLWGSPSKFV 141 (513)
Q Consensus 66 ~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d----~n~~lc~~f~I~~~PTl~~f~~g~~~ 141 (513)
++++|+|||+|||+|++++|.|+++++.++ .|||+.+ ++.++|++|+|+++||+++ +|+
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-------------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~-- 75 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVP-------------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR-- 75 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSC-------------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE--
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCC-------------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE--
Confidence 456899999999999999999999986652 4566422 5789999999999999877 441
Q ss_pred CCCCCCccccchhhhccCcCCHHHHHHHHH
Q 010286 142 AGSWEPNQEKKEIRALEDWQTADGLLTWIN 171 (513)
Q Consensus 142 ~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~ 171 (513)
.+.|.++.++|.+|+.
T Consensus 76 --------------~~~G~~~~~~l~~~~~ 91 (106)
T 3kp8_A 76 --------------TYTGVRSLEALAVASG 91 (106)
T ss_dssp --------------EEESCCCHHHHHHHHT
T ss_pred --------------EecCCCCHHHHHHHhC
Confidence 3678999999999884
No 118
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.45 E-value=2.8e-13 Score=122.42 Aligned_cols=101 Identities=15% Similarity=0.297 Sum_probs=78.6
Q ss_pred ccHHHHHhc--CCCCeEEEEEe-cCCCHHHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEeccc---------hhcH
Q 010286 54 TNFDAVLRD--TPATYAVVEFF-ANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCAL---------KINT 118 (513)
Q Consensus 54 ~~f~~~l~~--~~~~~vLV~Fy-A~WCg~Ck~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~~---------d~n~ 118 (513)
.++.+.+.. ..++++||+|| |+||++|+.+.|.+ .++++.+. ..+.++.||++. +.+.
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-------~~~~~v~vd~~~~~~~~~~~~~~~~ 106 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-------VHLHMVEVDFPQKNHQPEEQRQKNQ 106 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-------HHCEEEEEECCSSCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-------CcEEEEEecCccccCCChhhHhhHH
Confidence 445555432 22588999999 99999999999999 77876653 358899999864 3357
Q ss_pred HHHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcC--CHHHHHHHHHHhcc
Q 010286 119 NLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQ--TADGLLTWINKQTS 175 (513)
Q Consensus 119 ~lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~--~~e~L~~~i~~~l~ 175 (513)
+++++|+|.++||++++ ++|++ +..+ |.. +.+++.++|++.+.
T Consensus 107 ~l~~~~~v~~~Pt~~~~d~~G~~-------------~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 107 ELKAQYKVTGFPELVFIDAEGKQ-------------LARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp HHHHHTTCCSSSEEEEECTTCCE-------------EEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred HHHHHcCCCCCCEEEEEcCCCCE-------------EEEe-cCCCCCHHHHHHHHHHHHh
Confidence 89999999999999999 56543 3455 777 89999999988765
No 119
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.44 E-value=2.7e-14 Score=122.79 Aligned_cols=93 Identities=13% Similarity=0.136 Sum_probs=70.1
Q ss_pred CCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccceEEEecCCcccCCC
Q 010286 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGS 144 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~ 144 (513)
.+.+||+|||+||++|+.+.|.+.. .+.... ....+.+..||.+.+...+++.+|+|.++|||++|.+|
T Consensus 18 ~~~~LV~F~A~wC~~Ck~~~~~i~~---~~~~~a--~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G------ 86 (116)
T 3dml_A 18 AELRLLMFEQPGCLYCARWDAEIAP---QYPLTD--EGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGD------ 86 (116)
T ss_dssp -CEEEEEEECTTCHHHHHHHHHTTT---TGGGSH--HHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETT------
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHh---hHHHhh--hcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECC------
Confidence 3578999999999999999764432 222100 00125678889865555689999999999999999987
Q ss_pred CCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 145 WEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 145 ~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+++.++.|....+.+.+||++.+.
T Consensus 87 -------~ev~Ri~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 87 -------VESGRLEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp -------EEEEEEECCCCHHHHHHHHHHHHH
T ss_pred -------EEEeeecCCCCHHHHHHHHHHHHh
Confidence 455678999999999999988764
No 120
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.42 E-value=2.8e-13 Score=119.31 Aligned_cols=105 Identities=9% Similarity=0.161 Sum_probs=88.1
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCC
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I 126 (513)
.+++++.++|++.+.. +.+++|.|||+ |++|+.++|.++++|++++ +.+.|+.||. +++++++..|||
T Consensus 7 lv~~~t~~~f~~~~~~--~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~-------gk~~f~~vd~--d~~~~~a~~~gi 74 (133)
T 2djk_A 7 LIGEIGPETYSDYMSA--GIPLAYIFAET-AEERKELSDKLKPIAEAQR-------GVINFGTIDA--KAFGAHAGNLNL 74 (133)
T ss_dssp CSEECCHHHHHHHHHT--TSCEEEEECSC-SSSHHHHHHHHHHHHHSST-------TTSEEEEECT--TTTGGGTTTTTC
T ss_pred ceeccChHHHHHHhcC--CCCEEEEEecC-hhhHHHHHHHHHHHHHHhC-------CeEEEEEEch--HHhHHHHHHcCC
Confidence 3778999999988653 37899999999 8999999999999999986 4699999996 578889999999
Q ss_pred Cc--cceEEEecC--CcccCCCCCCccccchhhhcc--CcCCHHHHHHHHHHhcccc
Q 010286 127 GH--YPMLLWGSP--SKFVAGSWEPNQEKKEIRALE--DWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 127 ~~--~PTl~~f~~--g~~~~~~~~~~~~~~~v~~~~--g~~~~e~L~~~i~~~l~~~ 177 (513)
++ +||+++|.. |+ . ..+. |..+.+.|.+||++.+...
T Consensus 75 ~~~~iPtl~i~~~~~g~-------------~-~~~~~~g~~~~~~l~~fi~~~l~Gk 117 (133)
T 2djk_A 75 KTDKFPAFAIQEVAKNQ-------------K-FPFDQEKEITFEAIKAFVDDFVAGK 117 (133)
T ss_dssp CSSSSSEEEEECTTTCC-------------B-CCCCSSSCCCHHHHHHHHHHHHHTC
T ss_pred CcccCCEEEEEecCcCc-------------c-cCCCCccccCHHHHHHHHHHHHcCC
Confidence 99 999999976 32 1 1233 8899999999999988543
No 121
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.42 E-value=5.4e-13 Score=150.75 Aligned_cols=114 Identities=19% Similarity=0.414 Sum_probs=95.4
Q ss_pred CcceecCcccHHHHHhcCC-CCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 46 DHAVELNATNFDAVLRDTP-ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~-~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
+.|..|++++|++.+.+.+ +..++|.||||||+||+++.|.|+++|+.++ +.|.|+.|||+ .+..+|++|
T Consensus 543 ~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~-------~~v~~~~vd~~--~~~~l~~~~ 613 (780)
T 3apo_A 543 PSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLT-------GLINVGSVDCG--QYHSFCTQE 613 (780)
T ss_dssp CSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTSEEEEEETT--TTHHHHHHT
T ss_pred cceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhh-------CCeEEEEEECc--chHHHHHHc
Confidence 4688999999999987643 4678999999999999999999999999997 35999999995 578899999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccC-cCCHHHHHHHHHHhcccc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED-WQTADGLLTWINKQTSRS 177 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g-~~~~e~L~~~i~~~l~~~ 177 (513)
+|++|||+++|++|.... .....|.| .++.++|.+||.+.+...
T Consensus 614 ~v~~~Pti~~~~~~~~~~---------~~~~~y~g~~~~~~~l~~fi~~~~~~~ 658 (780)
T 3apo_A 614 NVQRYPEIRFYPQKSSKA---------YQYHSYNGWNRDAYSLRSWGLGFLPQA 658 (780)
T ss_dssp TCCSSSEEEEECCCSSSC---------CSCEECCCSCCSHHHHHHHHHTTSCCC
T ss_pred CCCCCCeEEEEcCCCcCc---------cchhhcCCCCCCHHHHHHHHhhhcccc
Confidence 999999999998763210 12345788 899999999999887543
No 122
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.41 E-value=1e-12 Score=115.95 Aligned_cols=105 Identities=14% Similarity=0.151 Sum_probs=84.3
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------
Q 010286 49 VELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------- 114 (513)
Q Consensus 49 ~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------------- 114 (513)
..++++.+..... .++++||.||++||++|+.+.|.++++++.+.+ .+.++.|+++.
T Consensus 15 ~~~~g~~~~~~~~--~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~~ 85 (148)
T 2b5x_A 15 AWLNGEVTREQLI--GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD-------QLNVVAVHMPRSEDDLDPGKIKETA 85 (148)
T ss_dssp EEESCCCCHHHHT--TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-------TSEEEEEECCCSTTTSSHHHHHHHH
T ss_pred ccccCcccchhhc--CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC-------CcEEEEEEcCCCccccCHHHHHHHH
Confidence 5667777765443 357899999999999999999999999999963 28888898642
Q ss_pred -----------hhcHHHHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 115 -----------KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 115 -----------d~n~~lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+.+.++++.|+|.++||++++ ++|++ +..+.|..+.++|.++|++.+.
T Consensus 86 ~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 86 AEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQL-------------RHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp HHTTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBE-------------EEEEESCSTTHHHHHHHHHHHT
T ss_pred HHcCCCcceEECCchhHHHHhCCCCCCEEEEECCCCcE-------------EEEecCCCCHHHHHHHHHHHHh
Confidence 446789999999999999998 55533 3456788889999999998775
No 123
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.41 E-value=4.3e-13 Score=114.07 Aligned_cols=98 Identities=17% Similarity=0.171 Sum_probs=77.1
Q ss_pred ceec-CcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHH----HHH
Q 010286 48 AVEL-NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTN----LCD 122 (513)
Q Consensus 48 v~~L-~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~----lc~ 122 (513)
...+ +.++|++++.+ +++++|.|+|+|||+|+.+.|.|+++++. . .+.++.||.+ ++++ ++.
T Consensus 8 ~~~i~s~e~f~~ii~~--~~~vvi~khatwCgpc~~~~~~~e~~~~~-~--------~v~~~~vdVd--e~r~~Sn~IA~ 74 (112)
T 3iv4_A 8 AIKLSSIDQFEQVIEE--NKYVFVLKHSETCPISANAYDQFNKFLYE-R--------DMDGYYLIVQ--QERDLSDYIAK 74 (112)
T ss_dssp EEECCSHHHHHHHHHH--CSEEEEEEECTTCHHHHHHHHHHHHHHHH-H--------TCCEEEEEGG--GGHHHHHHHHH
T ss_pred eeecCCHHHHHHHHhc--CCCEEEEEECCcCHhHHHHHHHHHHHhcc-C--------CceEEEEEee--cCchhhHHHHH
Confidence 3444 45789998886 48999999999999999999999999985 2 3789999974 5654 899
Q ss_pred HCCCCc-cceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHH
Q 010286 123 KFSVGH-YPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 170 (513)
Q Consensus 123 ~f~I~~-~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i 170 (513)
+|+|++ .||+++|++|+... ..-.+..+.+.|.+.+
T Consensus 75 ~~~V~h~sPq~il~k~G~~v~------------~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 75 KTNVKHESPQAFYFVNGEMVW------------NRDHGDINVSSLAQAE 111 (112)
T ss_dssp HHTCCCCSSEEEEEETTEEEE------------EEEGGGCSHHHHHHHT
T ss_pred HhCCccCCCeEEEEECCEEEE------------EeeccccCHHHHHHhh
Confidence 999995 99999999986442 1235667777776543
No 124
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.40 E-value=1.1e-12 Score=127.80 Aligned_cols=105 Identities=14% Similarity=0.182 Sum_probs=81.4
Q ss_pred cCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccc
Q 010286 51 LNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYP 130 (513)
Q Consensus 51 L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~P 130 (513)
+++++++.+ .+..++.++|.|||||||||+.+.|.|++++..+...+ .+.|.++.||++ .+++++++|+|+++|
T Consensus 125 l~~~~~~~~-~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~---~~~v~~~~vd~~--~~~~~~~~~~V~~vP 198 (243)
T 2hls_A 125 LEDATKEAL-KSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQG---NPVILSEAVEAY--ENPDIADKYGVMSVP 198 (243)
T ss_dssp CCHHHHHHH-HHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTT---CCCEEEEEEETT--TCHHHHHHTTCCSSS
T ss_pred CCHHHHHHH-HHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHccccc---CCcEEEEEEECc--cCHHHHHHcCCeeeC
Confidence 444444443 33334677999999999999999999999999983100 024999999985 588999999999999
Q ss_pred eEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccccC
Q 010286 131 MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (513)
Q Consensus 131 Tl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~~ 178 (513)
|+++ +|+ . .+.|.++.++|.++|++.++...
T Consensus 199 t~~i--~G~-------------~--~~~G~~~~~~l~~~l~~~~~~~~ 229 (243)
T 2hls_A 199 SIAI--NGY-------------L--VFVGVPYEEDFLDYVKSAAEGRL 229 (243)
T ss_dssp EEEE--TTE-------------E--EEESCCCHHHHHHHHHHHHTTCC
T ss_pred eEEE--CCE-------------E--EEeCCCCHHHHHHHHHHHhhccc
Confidence 9987 542 1 27899999999999999987644
No 125
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.39 E-value=5.5e-13 Score=127.86 Aligned_cols=101 Identities=11% Similarity=0.094 Sum_probs=80.3
Q ss_pred ccHHHHH-hcCCCCeEEEEEe-----cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCC
Q 010286 54 TNFDAVL-RDTPATYAVVEFF-----ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (513)
Q Consensus 54 ~~f~~~l-~~~~~~~vLV~Fy-----A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~ 127 (513)
+.+++.+ .+.. ++++|.|| +|||+||+.+.|+|+++|+++.+. +.|.++.|||+ +++++|++|+|+
T Consensus 9 ~~l~~~~~~~~~-~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~-----~~v~~~~vd~~--~~~~l~~~~~v~ 80 (229)
T 2ywm_A 9 MQLKELAQKEFK-EPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQ-----DKIKLDIYSPF--THKEETEKYGVD 80 (229)
T ss_dssp HHHHHHHHHHCC-SCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCT-----TTEEEEEECTT--TCHHHHHHTTCC
T ss_pred HHHHHHHHHhcc-CCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCC-----CceEEEEecCc--ccHHHHHHcCCC
Confidence 4555666 3443 45666666 899999999999999999988431 46999999994 689999999999
Q ss_pred ccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+|||+++|++| .....|.|.++.+++.+|+.+.+.
T Consensus 81 ~~Ptl~~~~~~-------------~~~~~~~G~~~~~~l~~~~~~~~~ 115 (229)
T 2ywm_A 81 RVPTIVIEGDK-------------DYGIRYIGLPAGLEFTTLINGIFH 115 (229)
T ss_dssp BSSEEEEESSS-------------CCCEEEESCCCTTHHHHHHHHHHH
T ss_pred cCcEEEEECCC-------------cccceecCCccHHHHHHHHHHHHh
Confidence 99999999753 223568899999999999988753
No 126
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.39 E-value=8.9e-13 Score=114.44 Aligned_cols=105 Identities=21% Similarity=0.312 Sum_probs=80.7
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------------
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------ 114 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------ 114 (513)
.+..++++.+... +..++++||.||++||++|+.+.|.++++++.+. .+.++.|+++.
T Consensus 9 ~~~~~~g~~~~l~--~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~~~~~~~~~~~~~~~ 78 (136)
T 1zzo_A 9 SAKTLDGHDFHGE--SLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--------EVTFVGVAGLDQVPAMQEFVNKY 78 (136)
T ss_dssp EEEBTTSCEEEGG--GGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECSSCHHHHHHHHHHT
T ss_pred ccccCCCCEeeHH--HhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--------CeEEEEEeCCCCHHHHHHHHHHc
Confidence 3444555544422 2235789999999999999999999999999985 27888898753
Q ss_pred ---------hhcHHHHHHCCCCccceEEEec-CCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 115 ---------KINTNLCDKFSVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 115 ---------d~n~~lc~~f~I~~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+.+.++++.|+|.++||++++. +|+ .+ .+.|..+.++|.++|++.+.
T Consensus 79 ~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~-------------i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 79 PVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGN-------------VD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp TCTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCC-------------EE-EEESCCCHHHHHHHHHHHC-
T ss_pred CCCceEEEEcCCcHHHHHcCCCCCceEEEECCCCC-------------EE-EEecCCCHHHHHHHHHHHhc
Confidence 3467899999999999999984 442 23 56788899999999988764
No 127
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.39 E-value=6.3e-13 Score=126.97 Aligned_cols=103 Identities=10% Similarity=0.156 Sum_probs=81.8
Q ss_pred cccHHHHH-hcCCCCeEEEEEecC-CCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccc
Q 010286 53 ATNFDAVL-RDTPATYAVVEFFAN-WCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYP 130 (513)
Q Consensus 53 ~~~f~~~l-~~~~~~~vLV~FyA~-WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~P 130 (513)
.+.+++.+ ....+..++|.||++ ||++|+.+.|.|+++++. . +.|.++.|||+.++++++|++|+|+++|
T Consensus 9 ~~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~-------~~v~~~~vd~~~~~~~~~~~~~~v~~~P 80 (226)
T 1a8l_A 9 KKVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-T-------DKLSYEIVDFDTPEGKELAKRYRIDRAP 80 (226)
T ss_dssp HHHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-C-------TTEEEEEEETTSHHHHHHHHHTTCCSSS
T ss_pred HHHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-C-------CceEEEEEeCCCcccHHHHHHcCCCcCc
Confidence 35566667 444456678999999 999999999999999864 2 3599999999643489999999999999
Q ss_pred eEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 131 MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 131 Tl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
|+++|++|+.. ...|.|.++.+.+.+|+...+.
T Consensus 81 t~~~~~~g~~~------------~~~~~G~~~~~~l~~~l~~~l~ 113 (226)
T 1a8l_A 81 ATTITQDGKDF------------GVRYFGLPAGHEFAAFLEDIVD 113 (226)
T ss_dssp EEEEEETTBCC------------SEEEESCCCTTHHHHHHHHHHH
T ss_pred eEEEEcCCcee------------eEEEeccCcHHHHHHHHHHHHh
Confidence 99999876321 1457788888899999987653
No 128
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.38 E-value=9e-13 Score=114.72 Aligned_cols=89 Identities=17% Similarity=0.305 Sum_probs=73.2
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------hhcHHHHHH
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------KINTNLCDK 123 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--------------------d~n~~lc~~ 123 (513)
.+++++|.||++||++|+.+.|.++++++.+. .+.++.|+++. +.+.+++++
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 94 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--------AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWAR 94 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHH
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--------CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHh
Confidence 35789999999999999999999999999985 27889999854 226789999
Q ss_pred CCCCccceEEEe-cCCcccCCCCCCccccchhhhcc---CcCCHHHHHHHHHHhc
Q 010286 124 FSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALE---DWQTADGLLTWINKQT 174 (513)
Q Consensus 124 f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~---g~~~~e~L~~~i~~~l 174 (513)
|+|.++||++++ ++|++ + .+. |..+.++|.++|++.+
T Consensus 95 ~~i~~~P~~~lid~~G~i-------------~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 95 YNVPWQPAFVFYRADGTS-------------T-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp TTCCSSSEEEEECTTSCE-------------E-EECCSSSCCCHHHHHHHHHHC-
T ss_pred cCCCCCCEEEEECCCCcE-------------E-EEEcCCCccCHHHHHHHHHHHh
Confidence 999999999998 45432 2 456 8889999999998754
No 129
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.38 E-value=6.5e-13 Score=116.80 Aligned_cols=88 Identities=16% Similarity=0.373 Sum_probs=74.0
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-----------------------hhcHHH
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-----------------------KINTNL 120 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-----------------------d~n~~l 120 (513)
.++++||.||++||++|+.+.|.++++++.+.+ ..+.++.|+++. +.+..+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 106 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPS------DSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGEL 106 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCC------SSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCC------CCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhH
Confidence 568999999999999999999999999999864 348999999854 336689
Q ss_pred HHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHH
Q 010286 121 CDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 170 (513)
Q Consensus 121 c~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i 170 (513)
++.|+|.++||++++ ++|++ +..+.|..+.++|.++|
T Consensus 107 ~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 107 MKEYHIITIPTSFLLNEKGEI-------------EKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp HHHTTCCEESEEEEECTTCCE-------------EEEEESCCCHHHHHHHH
T ss_pred HHhcCcCccCeEEEEcCCCcE-------------EEEEcCCcCHHHHHHhh
Confidence 999999999999998 55533 34577889999998887
No 130
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.36 E-value=3.1e-12 Score=114.26 Aligned_cols=96 Identities=18% Similarity=0.324 Sum_probs=77.7
Q ss_pred hcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc----------------------hhcH
Q 010286 61 RDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----------------------KINT 118 (513)
Q Consensus 61 ~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----------------------d~n~ 118 (513)
.+.+++++||+|||+||++|+.+.|.++++++.+++ ..+.++.|+++. ....
T Consensus 20 ~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~------~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (151)
T 3raz_A 20 QSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKK------GSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSR 93 (151)
T ss_dssp GGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCT------TTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHH
T ss_pred HHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc------CCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchH
Confidence 334568999999999999999999999999999864 348999999852 1346
Q ss_pred HHHHHCC--CCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 119 NLCDKFS--VGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 119 ~lc~~f~--I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
++++.|+ |.++||++++ ++|++ +..+.|..+.++|.++|++...
T Consensus 94 ~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 94 NFMKTYGNTVGVLPFTVVEAPKCGY-------------RQTITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp HHHHTTTCCSCCSSEEEEEETTTTE-------------EEECCSCCCHHHHHHHHHHHHT
T ss_pred HHHHHhCCccCCCCEEEEECCCCcE-------------EEEECCCCCHHHHHHHHHHHHH
Confidence 6889999 9999998887 45533 3567888999999999988764
No 131
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.36 E-value=1.6e-12 Score=115.85 Aligned_cols=94 Identities=14% Similarity=0.312 Sum_probs=77.3
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--------------------hcHHHHHH
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------INTNLCDK 123 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--------------------~n~~lc~~ 123 (513)
.++++||.||++||++|+.+.|.++++++.+.+ ..+.++.|+++.+ .+..+++.
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 98 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS------QGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDA 98 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc------CCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHh
Confidence 458899999999999999999999999999974 2488999988532 14589999
Q ss_pred CCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 124 FSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 124 f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
|+|.++||++++ ++|++ +..+.|..+.++|.++|++.+..
T Consensus 99 ~~v~~~P~~~lid~~G~i-------------~~~~~G~~~~~~l~~~l~~ll~~ 139 (151)
T 2f9s_A 99 YDVSPLPTTFLINPEGKV-------------VKVVTGTMTESMIHDYMNLIKPG 139 (151)
T ss_dssp TTCCSSCEEEEECTTSEE-------------EEEEESCCCHHHHHHHHHHHSCC
T ss_pred cCCCCCCeEEEECCCCcE-------------EEEEeCCCCHHHHHHHHHHHHhh
Confidence 999999999888 55533 34567888999999999988754
No 132
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.35 E-value=1.7e-12 Score=102.22 Aligned_cols=74 Identities=5% Similarity=0.114 Sum_probs=61.0
Q ss_pred EEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccceEEEecCCcccCCCCCC
Q 010286 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEP 147 (513)
Q Consensus 68 vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~ 147 (513)
..|+|||+||++|+.+.|.++++++.+. +.+.++.|| +.+++++|+|+++||+++ +|+..
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~-------~~~~~~~v~-----~~~~~~~~~v~~~Pt~~~--~G~~~------ 61 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELG-------IDAEFEKIK-----EMDQILEAGLTALPGLAV--DGELK------ 61 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTT-------CCEEEEEEC-----SHHHHHHHTCSSSSCEEE--TTEEE------
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcC-------CceEEEEec-----CHHHHHHCCCCcCCEEEE--CCEEE------
Confidence 3689999999999999999999999986 358888888 578999999999999988 55322
Q ss_pred ccccchhhhccCcC-CHHHHHHHH
Q 010286 148 NQEKKEIRALEDWQ-TADGLLTWI 170 (513)
Q Consensus 148 ~~~~~~v~~~~g~~-~~e~L~~~i 170 (513)
. .|.. +.++|.++|
T Consensus 62 -------~--~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 62 -------I--MGRVASKEEIKKIL 76 (77)
T ss_dssp -------E--CSSCCCHHHHHHHC
T ss_pred -------E--cCCCCCHHHHHHHh
Confidence 1 2666 788887765
No 133
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.35 E-value=1.5e-12 Score=117.53 Aligned_cols=108 Identities=15% Similarity=0.197 Sum_probs=81.7
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc-------------
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA------------- 113 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~------------- 113 (513)
.+..++++.+. +...+++++||+||++||++|+.+.|.+++++++++.. .+.++.|+++
T Consensus 22 ~l~~~~g~~~~--~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~------~~~vv~v~~~~~~~~~~~~~~~~ 93 (164)
T 2h30_A 22 TMKTADNRPAS--VYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS------SANLITVASPGFLHEKKDGEFQK 93 (164)
T ss_dssp TCEETTSSBGG--GGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT------TSEEEEEECTTSTTCCCTTHHHH
T ss_pred ccCCCCCCEee--HHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC------CcEEEEEEcCCCccccCHHHHHH
Confidence 45666666665 33344688999999999999999999999999987542 2555555431
Q ss_pred -------------chhcHHHHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 114 -------------LKINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 114 -------------~d~n~~lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
.+.+.+++++|+|.++||++++ ++|++ +..+.|..+.++|.++|++.+.
T Consensus 94 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 94 WYAGLNYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDV-------------QRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp HHTTSCCTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCE-------------EEEEESCCCHHHHHHHHHCTTC
T ss_pred HHHhCCCCcceEEEcCchHHHHHcCCCccceEEEECCCCcE-------------EEEEcCCCCHHHHHHHHHHHHH
Confidence 1345689999999999999998 55533 3456788899999999988764
No 134
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.34 E-value=3.8e-12 Score=114.80 Aligned_cols=107 Identities=13% Similarity=0.267 Sum_probs=81.6
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC--
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF-- 124 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f-- 124 (513)
.+..++++.+. +.+.+++++||.||++||++|+.+.|.++++++.+.+. .+.++.|+++ .+.+.+++|
T Consensus 18 ~l~~~~g~~~~--l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~------~v~~v~v~~d--~~~~~~~~~~~ 87 (165)
T 3or5_A 18 SGVTVDGKPFS--SASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR------GFTFVGIAVN--EQLPNVKNYMK 87 (165)
T ss_dssp EEECTTSCEEE--GGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT------TEEEEEEECS--CCHHHHHHHHH
T ss_pred eeeCCCCCEec--hhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC------CeEEEEEECC--CCHHHHHHHHH
Confidence 34455555544 22334689999999999999999999999999999742 3899999985 345555555
Q ss_pred -------------------------CCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 125 -------------------------SVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 125 -------------------------~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
+|.++||++++ ++|++ +..+.|..+.++|.++|++.+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 88 TQGIIYPVMMATPELIRAFNGYIDGGITGIPTSFVIDASGNV-------------SGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp HHTCCSCEEECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBE-------------EEEECSCCCHHHHHHHHHHHHC-
T ss_pred HcCCCCceEecCHHHHHHHhhhhccCCCCCCeEEEECCCCcE-------------EEEEcCCCCHHHHHHHHHHHHhh
Confidence 89999998887 45533 35577889999999999998864
No 135
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.34 E-value=4.8e-13 Score=122.32 Aligned_cols=108 Identities=15% Similarity=0.207 Sum_probs=73.2
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHH-HHHHCCC--Cccc
Q 010286 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTN-LCDKFSV--GHYP 130 (513)
Q Consensus 54 ~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~-lc~~f~I--~~~P 130 (513)
++|+..... ++++||+|||+||++|+.+.|.++++++.+. ..+.|+.||++. +.+ ++..|++ +++|
T Consensus 37 ~~~~~~~~~--~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~-------~~~~~~~v~~d~--~~~~~~~~~~~~~~~~P 105 (164)
T 1sen_A 37 DGKKEAAAS--GLPLMVIIHKSWCGACKALKPKFAESTEISE-------LSHNFVMVNLED--EEEPKDEDFSPDGGYIP 105 (164)
T ss_dssp HHHHHHHHH--TCCEEEEEECTTCHHHHHHHHHHHTCHHHHH-------HHTTSEEEEEEG--GGSCSCGGGCTTCSCSS
T ss_pred HHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHHHHHHHhh-------cCCeEEEEEecC--CchHHHHHhcccCCcCC
Confidence 455555544 4789999999999999999999999877653 235677788753 334 7888888 6699
Q ss_pred eEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 131 MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 131 Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
|+++| ++|+......... ..........+.++|.++|++.+.
T Consensus 106 t~~~~d~~G~~~~~~~G~~---~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 106 RILFLDPSGKVHPEIINEN---GNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp EEEEECTTSCBCTTCCCTT---SCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred eEEEECCCCCEEEEEeCCC---CccchhcccCCHHHHHHHHHHHHH
Confidence 99999 6776542100000 000000114788999999988764
No 136
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.32 E-value=5.3e-12 Score=113.39 Aligned_cols=93 Identities=17% Similarity=0.267 Sum_probs=74.9
Q ss_pred CCCeEEEEEecCCCHHHhh-hhHHHHHHHHHhCCCCCCCCCeEEEEEEecc--------------------------chh
Q 010286 64 PATYAVVEFFANWCPACRN-YKPQYEKVARLFNGPNAAHPGIILMTRVDCA--------------------------LKI 116 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~-~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~--------------------------~d~ 116 (513)
+++++||+||++||++|+. +.|.++++++.+.+. .+.++.|+++ .+.
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~------~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 102 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES------QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDM 102 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT------TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEEC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC------CcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECC
Confidence 3589999999999999999 599999999999742 3888888862 122
Q ss_pred cHH------HHHHCCCCccceEEEec-CCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 117 NTN------LCDKFSVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 117 n~~------lc~~f~I~~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+.. +++.|+|.++||++++. +|++ +..+.|..+.+.|.+.|++.+.
T Consensus 103 ~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 103 PREGQRIPSTMKKYRLEGTPSIILADRKGRI-------------RQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp CCTTCSSCHHHHHTTCCSSSEEEEECTTSBE-------------EEEEESCCCHHHHHHHHHHHHT
T ss_pred ccccchhhhHHHhcccCccceEEEECCCCcE-------------EEEecCcCCHHHHHHHHHHHHh
Confidence 334 89999999999999884 5533 3456788999999999998875
No 137
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.31 E-value=4.9e-12 Score=112.61 Aligned_cols=108 Identities=18% Similarity=0.355 Sum_probs=82.3
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh-----------
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI----------- 116 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~----------- 116 (513)
+..++++.+. +.+..++++||.||++||++|+.+.|.++++++.+.+ ..+.++.|+++.+.
T Consensus 15 l~~~~g~~~~--l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~ 86 (152)
T 2lja_A 15 YPDINGKTVS--LADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAG------KDIHFVSLSCDKNKKAWENMVTKDQ 86 (152)
T ss_dssp EEETTTEEEE--STTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTT------SSEEEEEEECCSCHHHHHHHHHHHT
T ss_pred eecCCCCEee--HHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhcc------CCeEEEEEEccCcHHHHHHHHHhcC
Confidence 3444444332 2333468999999999999999999999999999864 24899999986432
Q ss_pred ----------cHHHHHHCCCCccceEEEec-CCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 117 ----------NTNLCDKFSVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 117 ----------n~~lc~~f~I~~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
+.++++.|+|.++||++++. +|++ +..+.|..+.++|.++|++.+..
T Consensus 87 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 87 LKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKI-------------ISANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp CCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCE-------------EESSCCCTTCHHHHHHHHHHHTC
T ss_pred CCCceeecCcchhHHHHcCcCCCCEEEEECCCCeE-------------EEccCCCCCHHHHHHHHHHHhcc
Confidence 23799999999999999986 5543 34456778899999999988754
No 138
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.31 E-value=4e-12 Score=112.27 Aligned_cols=90 Identities=11% Similarity=0.286 Sum_probs=72.0
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHh-CCCCCCCCCeEEEEEEeccchh-----------------------cHH
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLF-NGPNAAHPGIILMTRVDCALKI-----------------------NTN 119 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~-~~~~~~~~~~v~~~~VDc~~d~-----------------------n~~ 119 (513)
+++++||.||++||++|+.+.|.++++++.+ .+ ..+.++.|+++.+. +..
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 105 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKN------KNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSE 105 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTC------TTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCH
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC------CCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchH
Confidence 4689999999999999999999999999999 53 23889999876433 568
Q ss_pred HHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 120 LCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 120 lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+++.|+|.++||++++ ++|++.. .+ .+.+++.+.|++.+.
T Consensus 106 ~~~~~~v~~~P~~~lid~~G~i~~-------------~~---~~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 106 TAKQYAILTLPTNILLSPTGKILA-------------RD---IQGEALTGKLKELLK 146 (148)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEEE-------------ES---CCHHHHHHHHHHHC-
T ss_pred HHHhcCCCCcCEEEEECCCCeEEE-------------ec---CCHHHHHHHHHHHHc
Confidence 9999999999999998 5664431 11 278889988887764
No 139
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.31 E-value=4.5e-12 Score=109.72 Aligned_cols=89 Identities=17% Similarity=0.374 Sum_probs=71.7
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------------hhc
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KIN 117 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--------------------------d~n 117 (513)
+++++||.||++||++|+.+.|.++++++.+. ..+.++.|++.. +.+
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 93 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAG-------DDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPS 93 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT-------TTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC-------CCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcc
Confidence 46899999999999999999999999999854 357888885421 335
Q ss_pred HHHHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHH
Q 010286 118 TNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (513)
Q Consensus 118 ~~lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~ 172 (513)
.++++.|+|.++||++++ ++|++ +..+.|..+.++|.++|++
T Consensus 94 ~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 94 GKLLETYGVRSYPTQAFIDKEGKL-------------VKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp CHHHHHTTCCSSSEEEEECTTCCE-------------EEEEESCCCHHHHHHHHHH
T ss_pred hHHHHHcCcccCCeEEEECCCCcE-------------EEeecCCCcHHHHHHHHHh
Confidence 679999999999999998 55543 3456788899999998875
No 140
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.30 E-value=3.7e-12 Score=116.94 Aligned_cols=79 Identities=15% Similarity=0.153 Sum_probs=64.7
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCC---
Q 010286 49 VELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS--- 125 (513)
Q Consensus 49 ~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~--- 125 (513)
+.++++.++. +.+.++++++|+|||+|||+|+.+.|.++++++.+. .+.|..||. +++++++.+|.
T Consensus 39 ~~~~~~~~~~-l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--------~v~~~~v~~--d~~~~~~~~~~~~~ 107 (167)
T 1z6n_A 39 NGLPSALTER-LQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--------NIELAIISK--GRAEDDLRQRLALE 107 (167)
T ss_dssp HCCCHHHHHH-HHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--------TEEEEEECH--HHHHHHTTTTTTCS
T ss_pred cCCCHHHHHH-HHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--------CcEEEEEEC--CCCHHHHHHHHHcC
Confidence 3455555544 555456889999999999999999999999998863 388999996 56888999997
Q ss_pred CCccceEEEecCC
Q 010286 126 VGHYPMLLWGSPS 138 (513)
Q Consensus 126 I~~~PTl~~f~~g 138 (513)
|+++||+++|.+|
T Consensus 108 v~~iPt~i~~~~~ 120 (167)
T 1z6n_A 108 RIAIPLVLVLDEE 120 (167)
T ss_dssp SCCSSEEEEECTT
T ss_pred CCCcCeEEEECCC
Confidence 9999999999764
No 141
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.30 E-value=9e-12 Score=111.74 Aligned_cols=93 Identities=16% Similarity=0.118 Sum_probs=75.0
Q ss_pred CCCeEEEEEecCCCHHHhhh-hHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------------hh
Q 010286 64 PATYAVVEFFANWCPACRNY-KPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KI 116 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~-~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--------------------------d~ 116 (513)
+++++||+||++||++|+.+ .|.++++++.+.+. .+.++.|+++. +.
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~------~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 100 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED------KVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQ 100 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT------TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEEC
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC------CEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcC
Confidence 46899999999999999997 99999999999742 48899888631 11
Q ss_pred cH-----HHHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 117 NT-----NLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 117 n~-----~lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+. .+++.|+|.++||++++ ++|++ +..+.|..+.++|.+.|++.+.
T Consensus 101 ~~~~~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 101 PGDGAMPRTMAAYQMRGTPSLLLIDKAGDL-------------RAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp CCSSSSCHHHHHTTCCSSSEEEEECTTSEE-------------EEEEESCCCHHHHHHHHHHHHT
T ss_pred ccchhhHHHHHHcCCCCCCEEEEECCCCCE-------------EEEEeCCCCHHHHHHHHHHHhc
Confidence 22 58999999999998887 45533 3456788999999999998875
No 142
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.27 E-value=3.6e-12 Score=115.09 Aligned_cols=67 Identities=7% Similarity=-0.003 Sum_probs=50.0
Q ss_pred CCeEEEEEecCCCHHHhhhhHHHHHHH---HHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccceEEEec-CCcc
Q 010286 65 ATYAVVEFFANWCPACRNYKPQYEKVA---RLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGS-PSKF 140 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~~~lA---~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PTl~~f~-~g~~ 140 (513)
++++||+|||+|||+|+.+.|.+.+.. +..+ ..|+.||++ +++.+++.+|+|.++||++||. +|+.
T Consensus 44 ~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~---------~~fv~V~vD-~e~~~~~~~~~v~~~PT~~f~~~~G~~ 113 (151)
T 3ph9_A 44 KKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ---------NKFIMLNLM-HETTDKNLSPDGQYVPRIMFVDPSLTV 113 (151)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH---------HTCEEEEES-SCCSCGGGCTTCCCSSEEEEECTTSCB
T ss_pred CCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh---------cCeEEEEec-CCchhhHhhcCCCCCCEEEEECCCCCE
Confidence 589999999999999999999998643 2221 124445543 2345678899999999999997 6754
Q ss_pred c
Q 010286 141 V 141 (513)
Q Consensus 141 ~ 141 (513)
.
T Consensus 114 v 114 (151)
T 3ph9_A 114 R 114 (151)
T ss_dssp C
T ss_pred E
Confidence 4
No 143
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.27 E-value=5.6e-12 Score=111.30 Aligned_cols=104 Identities=14% Similarity=0.162 Sum_probs=77.2
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHH--------
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTN-------- 119 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~-------- 119 (513)
+..++++.+. +.+.+++++||.||++||++|+.+.|.++++++.+.+ ..+.++.|+++. +.+
T Consensus 16 l~~~~g~~~~--l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~~v~v~~d~--~~~~~~~~~~~ 85 (148)
T 3hcz_A 16 MTDTTGTYRY--LYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRA------KGIQVYAANIER--KDEEWLKFIRS 85 (148)
T ss_dssp CBCTTSCBCC--GGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGG------GTEEEEEEECCS--SSHHHHHHHHH
T ss_pred EecCCCCEEE--hHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc------CCEEEEEEEecC--CHHHHHHHHHH
Confidence 3344444433 3344568999999999999999999999999999974 238999999853 333
Q ss_pred -----------------HHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 120 -----------------LCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 120 -----------------lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+++.|+|.++||++++ ++|++. ..+.|..+.+++++.+.+.+
T Consensus 86 ~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 86 KKIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKVII-------------AKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp HTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCBEE-------------EESCCGGGHHHHHHHHHHHH
T ss_pred cCCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCcEE-------------EecCCHHHHHHHHHHHHHHh
Confidence 8999999999999998 565433 34556666777777666554
No 144
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.26 E-value=1.4e-11 Score=110.19 Aligned_cols=91 Identities=19% Similarity=0.311 Sum_probs=72.1
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh-----------------------cHHH
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-----------------------NTNL 120 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-----------------------n~~l 120 (513)
+++++||.||++||++|+.+.|.++++++.+.+. .+.++.|+++.+. +.++
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~------~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 101 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK------GFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDV 101 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT------TEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC------CeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHH
Confidence 4689999999999999999999999999999742 3889999986321 5789
Q ss_pred HHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 121 CDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 121 c~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
++.|+|.++||++++ ++|++.. .+ .+.+++.++|++.+..
T Consensus 102 ~~~~~v~~~P~~~lid~~G~i~~-------------~~---~~~~~l~~~l~~l~~~ 142 (152)
T 2lrn_A 102 LESYCIVGFPHIILVDPEGKIVA-------------KE---LRGDDLYNTVEKFVNG 142 (152)
T ss_dssp HHHTTCCSSCEEEEECTTSEEEE-------------EC---CCTTHHHHHHHHHHTS
T ss_pred HHHhCCCcCCeEEEECCCCeEEE-------------ee---CCHHHHHHHHHHHHhh
Confidence 999999999999988 5664432 21 3456788888877653
No 145
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.26 E-value=7.6e-12 Score=111.46 Aligned_cols=93 Identities=14% Similarity=0.228 Sum_probs=75.5
Q ss_pred CCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc---------------------chhcHHHHHH
Q 010286 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA---------------------LKINTNLCDK 123 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~---------------------~d~n~~lc~~ 123 (513)
++++||.||++||++|+.+.|.++++++.+.+. .+.++.|+.+ .+.+..+++.
T Consensus 28 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~------~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 101 (153)
T 2l5o_A 28 GKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK------NFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQA 101 (153)
T ss_dssp TCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT------TEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHH
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccC------CeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHH
Confidence 588999999999999999999999999999742 3777777632 1345679999
Q ss_pred CCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 124 FSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 124 f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
|+|.++||++++ ++|++ +..+.|..+.++|.++|++.+..
T Consensus 102 ~~i~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~ll~~ 142 (153)
T 2l5o_A 102 FGTQVYPTSVLIGKKGEI-------------LKTYVGEPDFGKLYQEIDTAWRN 142 (153)
T ss_dssp HTCCSSSEEEEECSSSCC-------------CEEEESSCCHHHHHHHHHHHHHC
T ss_pred cCCCccCeEEEECCCCcE-------------EEEEcCCCCHHHHHHHHHHHHHh
Confidence 999999999988 45533 34577889999999999988754
No 146
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.23 E-value=2.4e-11 Score=107.45 Aligned_cols=88 Identities=18% Similarity=0.265 Sum_probs=67.4
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------------
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------ 114 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------ 114 (513)
.+..++++.+. +.+.+++++||+||++||++|+.+.|.++++++.+.+. ..+.++.|+++.
T Consensus 12 ~l~~~~g~~~~--l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-----~~~~vv~v~~d~~~~~~~~~~~~~ 84 (144)
T 1i5g_A 12 NVLKGAAADIA--LPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK-----KNFEVMLISWDESAEDFKDYYAKM 84 (144)
T ss_dssp EEEETTEEEEE--GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-----TTEEEEEEECCSSHHHHHHHHTTC
T ss_pred EEEcCCCCEec--HHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-----CCEEEEEEeCCCCHHHHHHHHHhC
Confidence 34455555444 22334589999999999999999999999999999741 248888888864
Q ss_pred ----------hhcHHHHHHCCCCccceEEEec--CCccc
Q 010286 115 ----------KINTNLCDKFSVGHYPMLLWGS--PSKFV 141 (513)
Q Consensus 115 ----------d~n~~lc~~f~I~~~PTl~~f~--~g~~~ 141 (513)
+.+.+++++|+|.++||++++. +|++.
T Consensus 85 ~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~ 123 (144)
T 1i5g_A 85 PWLALPFEDRKGMEFLTTGFDVKSIPTLVGVEADSGNII 123 (144)
T ss_dssp SSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEE
T ss_pred CccccccCchHHHHHHHHHcCCCCCCEEEEEECCCCcEE
Confidence 2257899999999999999985 66543
No 147
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.22 E-value=1.6e-11 Score=108.13 Aligned_cols=93 Identities=11% Similarity=0.315 Sum_probs=68.4
Q ss_pred HhcCCCCeEEEEEecCCCHHHhhhhHHHHH---HHHHhCCCCCCCCCeEEEEEEeccchhc-------------------
Q 010286 60 LRDTPATYAVVEFFANWCPACRNYKPQYEK---VARLFNGPNAAHPGIILMTRVDCALKIN------------------- 117 (513)
Q Consensus 60 l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~---lA~~~~~~~~~~~~~v~~~~VDc~~d~n------------------- 117 (513)
+.+.+++++||+||++||++|+.+.|.+.+ +++.+++ ..+.++.|+++.+..
T Consensus 22 l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~ 95 (142)
T 3ewl_A 22 MSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN------GTLRVLAIYPDENREEWATKAVYMPQGWIVGWNK 95 (142)
T ss_dssp GGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH------TSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECT
T ss_pred hhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc------CCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCC
Confidence 334456899999999999999999999998 8888864 248899998752211
Q ss_pred -HHH--HHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 118 -TNL--CDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 118 -~~l--c~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
..+ ++.|+|.++||++++ ++|++. .+..+.++|.++|++..
T Consensus 96 ~~~~~~~~~~~v~~~P~~~lid~~G~i~----------------~~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 96 AGDIRTRQLYDIRATPTIYLLDGRKRVI----------------LKDTSMEQLIDYLATQA 140 (142)
T ss_dssp TCHHHHTTCSCCCSSSEEEEECTTCBEE----------------ECSCCHHHHHHHHHC--
T ss_pred ccchhhHHHcCCCCCCeEEEECCCCCEE----------------ecCCCHHHHHHHHHHHc
Confidence 112 338999999999998 455432 24578899999988764
No 148
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.22 E-value=3.9e-11 Score=122.94 Aligned_cols=112 Identities=12% Similarity=0.177 Sum_probs=92.5
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
.+.+.+++.+++...+... .++++|.||++||++|+++.|.|+++|+.++ +.+.|+.|||+.+++..+|+.|
T Consensus 116 ~p~v~~~~~~~~~~~~~~~-~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~-------~~i~f~~vd~~~~~~~~~~~~f 187 (361)
T 3uem_A 116 LPLVIEFTEQTAPKIFGGE-IKTHILLFLPKSVSDYDGKLSNFKTAAESFK-------GKILFIFIDSDHTDNQRILEFF 187 (361)
T ss_dssp SCSEEECSTTTHHHHHSCS-CCEEEEEECCSSSSSHHHHHHHHHHHHGGGT-------TTCEEEEECTTSGGGHHHHHHT
T ss_pred CCcceecCcccHHHHhcCC-CCcEEEEEEeCCchhHHHHHHHHHHHHHHcc-------CceEEEEecCChHHHHHHHHHc
Confidence 3458889999999887664 3567999999999999999999999999997 4599999999644689999999
Q ss_pred CCCc--cceEEEecCCcccCCCCCCccccchhhhc---cCcCCHHHHHHHHHHhcccc
Q 010286 125 SVGH--YPMLLWGSPSKFVAGSWEPNQEKKEIRAL---EDWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 125 ~I~~--~PTl~~f~~g~~~~~~~~~~~~~~~v~~~---~g~~~~e~L~~~i~~~l~~~ 177 (513)
||++ +||+++|..+.. ...| .|.++.+.|.+|+++.+...
T Consensus 188 gi~~~~~P~~~~~~~~~~-------------~~ky~~~~~~~~~~~l~~fi~~~l~g~ 232 (361)
T 3uem_A 188 GLKKEECPAVRLITLEEE-------------MTKYKPESEELTAERITEFCHRFLEGK 232 (361)
T ss_dssp TCCTTTCSEEEEEECC---------------CCEECCSSCCCCHHHHHHHHHHHHTTC
T ss_pred CCCccCCccEEEEEcCCc-------------ccccCCCccccCHHHHHHHHHHHhcCC
Confidence 9998 999999876421 1223 37899999999999988643
No 149
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.21 E-value=2.6e-11 Score=108.21 Aligned_cols=93 Identities=18% Similarity=0.286 Sum_probs=75.0
Q ss_pred hcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc--c-----------------------h
Q 010286 61 RDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA--L-----------------------K 115 (513)
Q Consensus 61 ~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~--~-----------------------d 115 (513)
.+.. +++||.||++||++|+.+.|.++++++.+ + +.++.|+++ + +
T Consensus 27 ~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~--------v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~ 96 (154)
T 3ia1_A 27 ATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET-G--------VPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRD 96 (154)
T ss_dssp TTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH-C--------CCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSC
T ss_pred HHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc-C--------CeEEEEeCCCcccHHHHHHHHHHcCCCccccccccc
Confidence 3334 78999999999999999999999999998 2 567777761 0 2
Q ss_pred hcHHHHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 116 INTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 116 ~n~~lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
.+..+++.|+|.++|+++++ ++|++ +..+.|..+.++|.++|+++.+.
T Consensus 97 ~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 97 RPHEVAARFKVLGQPWTFVVDREGKV-------------VALFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp CHHHHHTTSSBCSSCEEEEECTTSEE-------------EEEEESBCCHHHHHHHHHHTTCC
T ss_pred chHHHHHHhCCCcccEEEEECCCCCE-------------EEEEcCCCCHHHHHHHHHhccCc
Confidence 56789999999999998887 55533 34567889999999999998753
No 150
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.20 E-value=1.2e-11 Score=113.96 Aligned_cols=81 Identities=16% Similarity=0.281 Sum_probs=65.3
Q ss_pred ecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHH-H--HHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC--
Q 010286 50 ELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQ-Y--EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF-- 124 (513)
Q Consensus 50 ~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~-~--~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f-- 124 (513)
...++.|+..... ++++||+|||+||++|+.+.|+ | .++++.++ +.+.++.||. ++++++.+.|
T Consensus 26 ~~~~ea~~~A~~~--~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~-------~~fv~ikVD~--de~~~l~~~y~~ 94 (173)
T 3ira_A 26 PWGEEAFEKARKE--NKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMN-------EAFVSIKVDR--EERPDIDNIYMT 94 (173)
T ss_dssp CSSHHHHHHHHHH--TCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHH-------HHCEEEEEET--TTCHHHHHHHHH
T ss_pred CcCHHHHHHHHHh--CCCEEEecccchhHhhccccccccCCHHHHHHHH-------hcCceeeeCC--cccCcHHHHHHH
Confidence 3456788877766 4899999999999999999993 4 57777775 3578899997 5678898888
Q ss_pred ------CCCccceEEEec-CCccc
Q 010286 125 ------SVGHYPMLLWGS-PSKFV 141 (513)
Q Consensus 125 ------~I~~~PTl~~f~-~g~~~ 141 (513)
+|.++||+++|. +|+..
T Consensus 95 ~~q~~~gv~g~Pt~v~l~~dG~~v 118 (173)
T 3ira_A 95 VCQIILGRGGWPLNIIMTPGKKPF 118 (173)
T ss_dssp HHHHHHSCCCSSEEEEECTTSCEE
T ss_pred HHHHHcCCCCCcceeeECCCCCce
Confidence 999999999995 66543
No 151
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.20 E-value=4.8e-11 Score=105.81 Aligned_cols=76 Identities=20% Similarity=0.346 Sum_probs=62.1
Q ss_pred hcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch----------------------hcH
Q 010286 61 RDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----------------------INT 118 (513)
Q Consensus 61 ~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d----------------------~n~ 118 (513)
.+.+++++||.|||+||++|+.+.|.++++++.+.+. ..+.++.|+++.+ .+.
T Consensus 24 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-----~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~ 98 (146)
T 1o8x_A 24 KSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES-----KNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQ 98 (146)
T ss_dssp GGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-----TTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHH
T ss_pred HHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc-----CCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHH
Confidence 3334689999999999999999999999999999732 2488888888642 256
Q ss_pred HHHHHCCCCccceEEEec--CCccc
Q 010286 119 NLCDKFSVGHYPMLLWGS--PSKFV 141 (513)
Q Consensus 119 ~lc~~f~I~~~PTl~~f~--~g~~~ 141 (513)
+++++|+|.++||++++. +|++.
T Consensus 99 ~~~~~~~v~~~Pt~~lid~~~G~i~ 123 (146)
T 1o8x_A 99 KLSKHFNVESIPTLIGVDADSGDVV 123 (146)
T ss_dssp HHHHHTTCCSSSEEEEEETTTCCEE
T ss_pred HHHHHhCCCCCCEEEEEECCCCeEE
Confidence 899999999999999986 66543
No 152
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.20 E-value=6.2e-11 Score=105.36 Aligned_cols=96 Identities=15% Similarity=0.249 Sum_probs=73.8
Q ss_pred CCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh--------------------cHHHHH
Q 010286 63 TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--------------------NTNLCD 122 (513)
Q Consensus 63 ~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~--------------------n~~lc~ 122 (513)
..++++||.||++||++|+.+.|.++++++.+.+. .+.++.|+++.+. +.++++
T Consensus 26 ~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~------~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 99 (152)
T 3gl3_A 26 KTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK------GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPR 99 (152)
T ss_dssp GTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG------TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHH
T ss_pred hCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC------CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHH
Confidence 34689999999999999999999999999999742 3888889875321 126889
Q ss_pred HCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCc--CCHHHHHHHHHHhcccc
Q 010286 123 KFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDW--QTADGLLTWINKQTSRS 177 (513)
Q Consensus 123 ~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~--~~~e~L~~~i~~~l~~~ 177 (513)
.|+|.++||++++ ++|++. ..+.|. .+.++|.++|++.++..
T Consensus 100 ~~~v~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 100 LYGVKGMPTSFLIDRNGKVL-------------LQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp HTTCCSSSEEEEECTTSBEE-------------EEEESCCTTTHHHHHHHHHHHTC--
T ss_pred HcCCCCCCeEEEECCCCCEE-------------EEEccCCCcCHHHHHHHHHHHHccc
Confidence 9999999998887 555432 344553 45689999999987643
No 153
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.18 E-value=2.7e-11 Score=120.48 Aligned_cols=85 Identities=19% Similarity=0.378 Sum_probs=65.6
Q ss_pred cccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc----hhcHHHHHHCCCCc
Q 010286 53 ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----KINTNLCDKFSVGH 128 (513)
Q Consensus 53 ~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----d~n~~lc~~f~I~~ 128 (513)
...+.+.+.+. .+|+|||||||||++++|.|++++++++ .|||+. ++++++|++|+|++
T Consensus 189 ~~~la~~l~~~----~vV~F~A~WC~~Ck~l~p~le~lA~~l~-------------~Vd~d~~d~~~~~~~la~~~gI~~ 251 (291)
T 3kp9_A 189 AVGLAAHLRQI----GGTMYGAYWCPHCQDQKELFGAAFDQVP-------------YVECSPNGPGTPQAQECTEAGITS 251 (291)
T ss_dssp HHHHHHHHHHT----TCEEEECTTCHHHHHHHHHHGGGGGGSC-------------EEESCSSCSSSCCCHHHHTTTCCS
T ss_pred HHHHHHHhCCC----CEEEEECCCCHHHHHHHHHHHHHHHHcC-------------EEEEeecCchhhHHHHHHHcCCcc
Confidence 34566666664 2799999999999999999999986642 455541 34789999999999
Q ss_pred cceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHH
Q 010286 129 YPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (513)
Q Consensus 129 ~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~ 172 (513)
+||+++ +|+ .+.|.++.++|.+|++-
T Consensus 252 vPT~~i--~G~----------------~~~G~~~~~~L~~~l~~ 277 (291)
T 3kp9_A 252 YPTWII--NGR----------------TYTGVRSLEALAVASGY 277 (291)
T ss_dssp TTEEEE--TTE----------------EEESCCCHHHHHHHTCC
T ss_pred cCeEEE--CCE----------------EecCCCCHHHHHHHHCC
Confidence 999654 441 37889999999998843
No 154
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.17 E-value=4.3e-11 Score=105.60 Aligned_cols=101 Identities=10% Similarity=0.097 Sum_probs=71.8
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHH---HHHHhCCCCCCCCCeEEEEEEeccchhc-------
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEK---VARLFNGPNAAHPGIILMTRVDCALKIN------- 117 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~---lA~~~~~~~~~~~~~v~~~~VDc~~d~n------- 117 (513)
+..++++.+. +.+..++++||.|||+||++|+.+.|.+++ +++.+++ ..+.++.|+.+.+..
T Consensus 16 l~~~~g~~~~--l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~------~~~~vi~i~~d~~~~~~~~~~~ 87 (142)
T 3eur_A 16 YTLDSGVKGT--LYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAA------KKLKVLSIYPDEELDEWKKHRN 87 (142)
T ss_dssp EEETTSCEEE--TTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHT------TSEEEEEEECSSCHHHHHHHGG
T ss_pred EEcCCCCEee--HHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhcc------CCeEEEEEEcCCCHHHHHHHHH
Confidence 4444444432 344456899999999999999999999999 9999974 348888898753211
Q ss_pred ---------------HHHHHHCCCCccceEEEec-CCcccCCCCCCccccchhhhccCcCCHHHHHHHHHH
Q 010286 118 ---------------TNLCDKFSVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (513)
Q Consensus 118 ---------------~~lc~~f~I~~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~ 172 (513)
..+.+.|+|.++||++++. +|++.. . ..+.++|.++|++
T Consensus 88 ~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~-------------~---~~~~~~l~~~l~e 142 (142)
T 3eur_A 88 DFAKEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLL-------------K---DATLQKVEQYLAE 142 (142)
T ss_dssp GSCTTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEE-------------E---EECHHHHHHHHHC
T ss_pred hcccccccccCccchhhhhhhcCCCcCCeEEEECCCCcEEe-------------c---CCCHHHHHHHHhC
Confidence 1257889999999999884 453321 1 2357888888753
No 155
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.17 E-value=6.7e-11 Score=104.30 Aligned_cols=75 Identities=17% Similarity=0.340 Sum_probs=61.4
Q ss_pred cCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch----------------------hcHH
Q 010286 62 DTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----------------------INTN 119 (513)
Q Consensus 62 ~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d----------------------~n~~ 119 (513)
+.+++++||.|||+||++|+.+.|.++++++.+.+. ..+.++.|+++.+ .+.+
T Consensus 25 ~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-----~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (144)
T 1o73_A 25 SLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA-----KNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSE 99 (144)
T ss_dssp GGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-----TTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHH
T ss_pred HhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccC-----CCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHH
Confidence 334689999999999999999999999999999732 2488888887642 2568
Q ss_pred HHHHCCCCccceEEEec--CCccc
Q 010286 120 LCDKFSVGHYPMLLWGS--PSKFV 141 (513)
Q Consensus 120 lc~~f~I~~~PTl~~f~--~g~~~ 141 (513)
++++|+|.++||++++. +|++.
T Consensus 100 ~~~~~~v~~~Pt~~lid~~~G~i~ 123 (144)
T 1o73_A 100 LGKTFGVESIPTLITINADTGAII 123 (144)
T ss_dssp HHHHHTCCSSSEEEEEETTTCCEE
T ss_pred HHHHcCCCCCCEEEEEECCCCeEE
Confidence 99999999999999987 56543
No 156
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.17 E-value=7.5e-11 Score=107.48 Aligned_cols=74 Identities=22% Similarity=0.363 Sum_probs=60.8
Q ss_pred CCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhc----------------------HHH
Q 010286 63 TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN----------------------TNL 120 (513)
Q Consensus 63 ~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n----------------------~~l 120 (513)
.+++++||+|||+||++|+.+.|.++++++.+++. ..+.|+.|+++.+.. .++
T Consensus 46 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-----~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 120 (165)
T 3s9f_A 46 LSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS-----KNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEAL 120 (165)
T ss_dssp GTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-----TTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHH
T ss_pred cCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccC-----CCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHH
Confidence 34689999999999999999999999999999742 248888888754322 789
Q ss_pred HHHCCCCccceEEEec-C-Cccc
Q 010286 121 CDKFSVGHYPMLLWGS-P-SKFV 141 (513)
Q Consensus 121 c~~f~I~~~PTl~~f~-~-g~~~ 141 (513)
++.|+|.++||++++. + |++.
T Consensus 121 ~~~~~v~~~Pt~~lid~~~G~iv 143 (165)
T 3s9f_A 121 TKKYSVESIPTLIGLNADTGDTV 143 (165)
T ss_dssp HHHTTCCSSSEEEEEETTTCCEE
T ss_pred HHHcCCCCCCEEEEEeCCCCEEE
Confidence 9999999999999986 3 6544
No 157
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.16 E-value=7.1e-11 Score=106.24 Aligned_cols=106 Identities=16% Similarity=0.363 Sum_probs=76.7
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------- 114 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------- 114 (513)
+..++++.+. +.+.+++++||.||++||++|+.+.|.++++++.+.+ ..+.++.|+++.
T Consensus 26 l~~~~g~~~~--l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~ 97 (158)
T 3hdc_A 26 LPTLSGENKS--LAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPK------GDLVVLAVNVEKRFPEKYRRAPVSF 97 (158)
T ss_dssp EECTTSCEEE--SGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSST------TSEEEEEEECSSSCCGGGGGCCCSC
T ss_pred eEcCCCCEEe--hHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHccc------CCeEEEEEeCCHHHHHHHHHcCCCc
Confidence 4444444443 2333468999999999999999999999999999974 348999999853
Q ss_pred ----hhcHHHHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCc--CCHHHHHHHHHHhc
Q 010286 115 ----KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDW--QTADGLLTWINKQT 174 (513)
Q Consensus 115 ----d~n~~lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~--~~~e~L~~~i~~~l 174 (513)
+.+.++++.|+|.++||++++ ++|++. ..+.|. .+.+++++.+.+..
T Consensus 98 ~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~-------------~~~~G~~~~~~~~~~~~~~~~~ 151 (158)
T 3hdc_A 98 NFLSDATGQVQQRYGANRLPDTFIVDRKGIIR-------------QRVTGGIEWDAPKVVSYLKSLE 151 (158)
T ss_dssp EEEECTTSHHHHHTTCCSSSEEEEECTTSBEE-------------EEEESCCCTTSHHHHHHHHTTC
T ss_pred eEEECchHHHHHHhCCCCcceEEEEcCCCCEE-------------EEEeCCCccchHHHHHHHHhhc
Confidence 235789999999999997776 555432 344454 44566776666544
No 158
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.15 E-value=1.3e-10 Score=103.57 Aligned_cols=92 Identities=14% Similarity=0.247 Sum_probs=71.8
Q ss_pred cCCCCeEEEEEecCCCHH--HhhhhHHHHHHHHHh-CCCCCCCCCeEEEEEEeccchh----------------------
Q 010286 62 DTPATYAVVEFFANWCPA--CRNYKPQYEKVARLF-NGPNAAHPGIILMTRVDCALKI---------------------- 116 (513)
Q Consensus 62 ~~~~~~vLV~FyA~WCg~--Ck~~~P~~~~lA~~~-~~~~~~~~~~v~~~~VDc~~d~---------------------- 116 (513)
+.+++++||.||++||++ |+.+.|.+.++++.+ ++ ..+.++.|+++.+.
T Consensus 30 ~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~ 103 (150)
T 3fw2_A 30 AFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKN------KYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGG 103 (150)
T ss_dssp TTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTC------SSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCG
T ss_pred hhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccC------CCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcc
Confidence 334689999999999999 999999999999999 53 24889999886432
Q ss_pred -cHHHHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 117 -NTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 117 -n~~lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+.++++.|+|.++||++++ ++|++.. .+ .+.+++.+.|++.+.
T Consensus 104 ~~~~~~~~~~v~~~P~~~lid~~G~i~~-------------~~---~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 104 LNSEVAKQYSIYKIPANILLSSDGKILA-------------KN---LRGEELKKKIENIVE 148 (150)
T ss_dssp GGCHHHHHTTCCSSSEEEEECTTSBEEE-------------ES---CCHHHHHHHHHHHHH
T ss_pred cchHHHHHcCCCccCeEEEECCCCEEEE-------------cc---CCHHHHHHHHHHHHh
Confidence 3479999999999999998 5664432 12 267788888876653
No 159
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.15 E-value=8.7e-11 Score=108.33 Aligned_cols=113 Identities=11% Similarity=0.179 Sum_probs=78.4
Q ss_pred cceec--CcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 47 HAVEL--NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 47 ~v~~L--~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
.+..+ +.+.+. +.+.+++++||.||++||++|+.+.|.++++++.+.+.+......+.|+.|+++. .+.+..++|
T Consensus 41 ~l~~~~~~g~~~~--l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~-~~~~~~~~~ 117 (183)
T 3lwa_A 41 GGDSLMEEGTQIN--LSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD-YSRDIAQDF 117 (183)
T ss_dssp EEEBSSSTTCEEE--GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC-CCHHHHHHH
T ss_pred eccccccCCcEec--HHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC-CCHHHHHHH
Confidence 34445 444443 3334568999999999999999999999999999974320001234999999853 144555554
Q ss_pred -------------------------CCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 125 -------------------------SVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 125 -------------------------~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+|.++|+++++ ++|++ +..+.|..+.++|.++|++.+.
T Consensus 118 ~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 118 VTDNGLDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRP-------------AAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp HHHTTCCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCE-------------EEEECSCCCHHHHHHHHHHHHH
T ss_pred HHHcCCCccEEECCcchHHHHhccCCCCCCCeEEEECCCCcE-------------EEEEcCCCCHHHHHHHHHHHHh
Confidence 68999976665 55543 3456788899999999988763
No 160
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.14 E-value=8.3e-11 Score=104.77 Aligned_cols=93 Identities=16% Similarity=0.333 Sum_probs=70.5
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch---------------------hcHHHHH
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK---------------------INTNLCD 122 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d---------------------~n~~lc~ 122 (513)
.++++||.||++||++|+.+.|.++++++.+.+ ..+.++.|+++.+ .+..+++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 100 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAG------KPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGK 100 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT------SSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc------CCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHH
Confidence 468999999999999999999999999999974 2488888987542 1234889
Q ss_pred HCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcC--CHHHHHHHHHHhcc
Q 010286 123 KFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQ--TADGLLTWINKQTS 175 (513)
Q Consensus 123 ~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~--~~e~L~~~i~~~l~ 175 (513)
.|+|.++|+++++ ++|++ +..+.|.. +.+++.++|++...
T Consensus 101 ~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 101 LYGTTGVPETFVIDRHGVI-------------LKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp HHTCCSBCEEEEECTTSBE-------------EEEEESCCCTTSHHHHHHHHTC--
T ss_pred HhCCCCCCeEEEECCCCcE-------------EEEEcCCCccccHHHHHHHHHHHH
Confidence 9999999977666 55543 23455554 66789999877553
No 161
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.13 E-value=5.9e-11 Score=105.88 Aligned_cols=89 Identities=16% Similarity=0.244 Sum_probs=69.3
Q ss_pred CCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---------------------hhcHHHHHH
Q 010286 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------------------KINTNLCDK 123 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---------------------d~n~~lc~~ 123 (513)
++++||.||++||++|+.+.|.+++++++ . .+.++.|+++. +.+.++++.
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-~--------~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKD-K--------RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIE 112 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTC-T--------TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHH
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhc-C--------CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHh
Confidence 57899999999999999999999988764 1 36777777531 345689999
Q ss_pred CCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 124 FSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 124 f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
|+|.++||++++ ++|++ +..+.|..+.++|.++|++.+.
T Consensus 113 ~~v~~~P~~~~id~~G~i-------------~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 113 WGVYGVPETFVVGREGTI-------------VYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp TTCCSSCEEEEECTTSBE-------------EEEEESCCCHHHHHHTHHHHHH
T ss_pred cCcCccCeEEEEcCCCCE-------------EEEEeCCCCHHHHHHHHHHHHH
Confidence 999999976665 55533 3456788899999999887764
No 162
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.13 E-value=1.4e-10 Score=104.86 Aligned_cols=92 Identities=16% Similarity=0.299 Sum_probs=72.3
Q ss_pred hcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch----------------hc-------
Q 010286 61 RDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----------------IN------- 117 (513)
Q Consensus 61 ~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d----------------~n------- 117 (513)
.+.+++++||.||++||++|+.+.|.++++++.+. .+.|+.|+++.. .+
T Consensus 33 ~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--------~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (165)
T 3ha9_A 33 NNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--------EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKF 104 (165)
T ss_dssp GGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--------TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHH
T ss_pred HHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--------CcEEEEEEecccccccccccccccCCCCCCHHHHHHH
Confidence 33456899999999999999999999999999985 388999987510 12
Q ss_pred ---------------HHHHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcC-CHHHHHHHHHHhcc
Q 010286 118 ---------------TNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQ-TADGLLTWINKQTS 175 (513)
Q Consensus 118 ---------------~~lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~-~~e~L~~~i~~~l~ 175 (513)
.++++.|+|.++||++++ ++|++. . .|.. +.++|.+.|++.++
T Consensus 105 ~~~~~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~-------------~--~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 105 IANYGDPSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVL-------------Y--AGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp HHHHSCTTSEEEECCSHHHHHTTCCSSSEEEEEETTCCEE-------------E--EEESCCHHHHHHHHHHC--
T ss_pred HHHcCCCCeeEEeChHHHHHHhCCCCceEEEEEcCCCcEE-------------E--eCCCCCHHHHHHHHHHHhc
Confidence 378999999999999998 455332 2 5777 89999999987653
No 163
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.13 E-value=1.4e-10 Score=103.99 Aligned_cols=87 Identities=6% Similarity=0.047 Sum_probs=66.6
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhc------------------H---HHHH
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN------------------T---NLCD 122 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n------------------~---~lc~ 122 (513)
+++++||.||++||++|+.+.|.++++++++.+. .+.++.|+++.+.. . .+++
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~------~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 107 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ------GFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYIS 107 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG------TEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHH
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC------CeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHH
Confidence 3588999999999999999999999999999742 38899999853221 0 2889
Q ss_pred HCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHH
Q 010286 123 KFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTW 169 (513)
Q Consensus 123 ~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~ 169 (513)
.|+|.++||++++ ++|++. ..+.|..+.++...-
T Consensus 108 ~~~v~~~P~~~lid~~G~i~-------------~~~~g~~~~e~~~~~ 142 (152)
T 2lrt_A 108 LYNVTNLPSVFLVNRNNELS-------------ARGENIKDLDEAIKK 142 (152)
T ss_dssp HHTCCSCSEEEEEETTTEEE-------------EETTTCSCHHHHHHH
T ss_pred HcCcccCceEEEECCCCeEE-------------EecCCHHHHHHHHHH
Confidence 9999999999998 466433 445666666555443
No 164
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.12 E-value=6e-11 Score=107.64 Aligned_cols=89 Identities=12% Similarity=0.121 Sum_probs=68.1
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc---------------------chhcHHHHH
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA---------------------LKINTNLCD 122 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~---------------------~d~n~~lc~ 122 (513)
+++++||+||++||++|+.+.|.++++++. + +.++.|+++ .+.+.++++
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-~---------v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 119 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ-G---------IRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGL 119 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT-T---------CCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC-C---------CEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHH
Confidence 358899999999999999999999999875 1 556666642 244668999
Q ss_pred HCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 123 KFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 123 ~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+|+|.++||++++ ++|++ +..+.|..+.+.+.++|++.+.
T Consensus 120 ~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 120 DLGVYGAPETFLIDGNGII-------------RYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp HHTCCSSSEEEEECTTSBE-------------EEEEESCCCHHHHHHTTHHHHH
T ss_pred HcCccccCEEEEECCCCeE-------------EEEEeCCCCHHHHHHHHHHHHH
Confidence 9999999965554 55543 3456788889999888877654
No 165
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.12 E-value=1e-10 Score=98.99 Aligned_cols=77 Identities=12% Similarity=0.150 Sum_probs=64.3
Q ss_pred eEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccceEEEecCCcccCCCCC
Q 010286 67 YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWE 146 (513)
Q Consensus 67 ~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~ 146 (513)
..|+.||++||++|+...|.++++++++. +.+..||++ +++++..+|+++ +||+++|.+|+..
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~---------i~~~~vDId--~d~~l~~~ygv~-VP~l~~~~dG~~v----- 92 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW---------FELEVINID--GNEHLTRLYNDR-VPVLFAVNEDKEL----- 92 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC---------CCCEEEETT--TCHHHHHHSTTS-CSEEEETTTTEEE-----
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC---------CeEEEEECC--CCHHHHHHhCCC-CceEEEEECCEEE-----
Confidence 46999999999999999999999999863 678899974 578999999998 9999998776422
Q ss_pred CccccchhhhccCcCCHHHHHHHH
Q 010286 147 PNQEKKEIRALEDWQTADGLLTWI 170 (513)
Q Consensus 147 ~~~~~~~v~~~~g~~~~e~L~~~i 170 (513)
..|..+.+.|.+||
T Consensus 93 ----------~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 93 ----------CHYFLDSDVIGAYL 106 (107)
T ss_dssp ----------ECSSCCCHHHHHHH
T ss_pred ----------EecCCCHHHHHHHh
Confidence 24667888888876
No 166
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.10 E-value=2.1e-10 Score=106.24 Aligned_cols=105 Identities=10% Similarity=0.099 Sum_probs=76.7
Q ss_pred HhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------------
Q 010286 60 LRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------------------- 114 (513)
Q Consensus 60 l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------------------- 114 (513)
+.+..++++||.||++||++|+.+.|.++++++++.+ . +.++.|+++.
T Consensus 28 l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~------~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~ 100 (188)
T 2cvb_A 28 LSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRG------K-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPY 100 (188)
T ss_dssp GGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTT------T-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCE
T ss_pred HHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhc------C-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceE
Confidence 3344568999999999999999999999999999963 3 8899998732
Q ss_pred --hhcHHHHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 115 --KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 115 --d~n~~lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
+.+.++++.|+|.++||++++ ++|++...+.. .....+.|..+.++|.+.|++.+..
T Consensus 101 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~-----~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 101 LLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRV-----NDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp EECSSSHHHHHTTCCEESEEEEECTTCBEEEEECS-----SSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred EECCcchHHHHcCCCCCCeEEEECCCCcEEEEEec-----CCccccccccCHHHHHHHHHHHHcC
Confidence 235678999999999999888 56654321000 0000133455788999999887753
No 167
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.09 E-value=9.8e-11 Score=109.02 Aligned_cols=100 Identities=11% Similarity=0.117 Sum_probs=74.5
Q ss_pred CC-eEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---------------------------hh
Q 010286 65 AT-YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------------------------KI 116 (513)
Q Consensus 65 ~~-~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---------------------------d~ 116 (513)
++ ++||.||++||++|+.+.|.++++++++.+. .+.++.|+++. +.
T Consensus 45 gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~ 118 (196)
T 2ywi_A 45 SDAATVIMFICNHCPFVKHVQHELVRLANDYMPK------GVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDE 118 (196)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG------TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECS
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC------CcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECC
Confidence 35 5999999999999999999999999999742 38888898742 33
Q ss_pred cHHHHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhh-ccCcCCHHHHHHHHHHhcc
Q 010286 117 NTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRA-LEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 117 n~~lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~-~~g~~~~e~L~~~i~~~l~ 175 (513)
+.++++.|+|.++||++++ ++|++...... ..... +.|..+.++|.+.|++.+.
T Consensus 119 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~-----~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 119 TQEVAKAYDAACTPDFYIFDRDLKCVYRGQL-----DDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp SCHHHHHHTCCEESEEEEEETTCBEEEEECS-----SSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred chHHHHHhCCCCCCeEEEEcCCCeEEEcccc-----CcccccccCccCHHHHHHHHHHHHc
Confidence 5678999999999999888 56654321000 00000 4567788999999998875
No 168
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.08 E-value=2.7e-10 Score=116.74 Aligned_cols=96 Identities=9% Similarity=0.086 Sum_probs=77.4
Q ss_pred hcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------------h
Q 010286 61 RDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------------K 115 (513)
Q Consensus 61 ~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------------------------d 115 (513)
.+.+++++||+||++||++|+.+.|.++++++++.+ ..+.|+.|+++. +
T Consensus 78 sdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~------~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D 151 (352)
T 2hyx_A 78 KSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKD------SGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALD 151 (352)
T ss_dssp GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEEC
T ss_pred HHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhc------CCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeC
Confidence 333468999999999999999999999999999974 248899998741 2
Q ss_pred hcHHHHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 116 INTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 116 ~n~~lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
.+..+++.|+|.++||++++ ++|++ +..+.|..+.++|.++|++.+.
T Consensus 152 ~~~~l~~~ygV~~~Pt~~lID~~G~I-------------v~~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 152 NNYATWTNYRNRYWPAEYLIDATGTV-------------RHIKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp TTSHHHHHTTCCEESEEEEECTTSBE-------------EEEEESBCCHHHHHHHHHHHHH
T ss_pred CcHHHHHHcCCCccCEEEEEeCCCeE-------------EEEEcCCCCHHHHHHHHHHHHh
Confidence 34579999999999998887 55533 3456788899999999988774
No 169
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.07 E-value=4.9e-10 Score=103.44 Aligned_cols=108 Identities=14% Similarity=0.253 Sum_probs=77.4
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch---hcHHHHHHC
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK---INTNLCDKF 124 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d---~n~~lc~~f 124 (513)
+..++++.+. +.+.+++++||.||++||++|+.+.|.++++++.+.+ ..+.++.|+++.+ ...+.++++
T Consensus 45 l~~~~G~~~~--l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~d~~~~~~~~~~~~~~ 116 (186)
T 1jfu_A 45 FEDADGKPKK--LSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSG------PNFEVVAINIDTRDPEKPKTFLKEA 116 (186)
T ss_dssp EECTTSCEEE--GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCB------TTEEEEEEECCCSCTTHHHHHHHHT
T ss_pred eEcCCCCEee--HHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhcc------CCcEEEEEECCCCCHHHHHHHHHHc
Confidence 3344444333 2333468999999999999999999999999999973 2488888988532 235677788
Q ss_pred CCC-----------------------ccceEEEe-cCCcccCCCCCCccccchhhhccCcCC--HHHHHHHHHHhccc
Q 010286 125 SVG-----------------------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQT--ADGLLTWINKQTSR 176 (513)
Q Consensus 125 ~I~-----------------------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~--~e~L~~~i~~~l~~ 176 (513)
++. ++||++++ ++|++ +..+.|..+ .+++.++|++.+..
T Consensus 117 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i-------------~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 117 NLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCE-------------IATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp TCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBE-------------EEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred CCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCE-------------EEEEecCCccCHHHHHHHHHHHhcc
Confidence 775 89998887 45543 234556543 78899999887753
No 170
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.06 E-value=3.6e-10 Score=102.11 Aligned_cols=106 Identities=10% Similarity=0.177 Sum_probs=79.5
Q ss_pred cccHHHHHhcC--CCCeEEEEEecCCCHHHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCC
Q 010286 53 ATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (513)
Q Consensus 53 ~~~f~~~l~~~--~~~~vLV~FyA~WCg~Ck~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~ 127 (513)
..+|++.+... .++++||+||++||..|+.|.... .++++.++ ..+.+..+|.+.+++..+.++|+|.
T Consensus 28 ~~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~-------~~fv~v~~d~~~~~~~~l~~~y~v~ 100 (153)
T 2dlx_A 28 KGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIR-------EHFIFWQVYHDSEEGQRYIQFYKLG 100 (153)
T ss_dssp CSCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHH-------HTEEEEEEESSSHHHHHHHHHHTCC
T ss_pred ccCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHH-------cCeEEEEEecCCHhHHHHHHHcCCC
Confidence 46788877432 368999999999999999997544 45555553 2378889998777778899999999
Q ss_pred ccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcccc
Q 010286 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 128 ~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~ 177 (513)
++||++|+.+.. + +.+..+.| .+++++++.|++.+...
T Consensus 101 ~~P~~~fld~~~---G--------~~l~~~~g-~~~~~fl~~L~~~l~~~ 138 (153)
T 2dlx_A 101 DFPYVSILDPRT---G--------QKLVEWHQ-LDVSSFLDQVTGFLGEH 138 (153)
T ss_dssp SSSEEEEECTTT---C--------CCCEEESS-CCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEeCCC---C--------cEeeecCC-CCHHHHHHHHHHHHHhc
Confidence 999999986420 0 22334555 89999999998887544
No 171
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.06 E-value=2.2e-10 Score=105.46 Aligned_cols=91 Identities=14% Similarity=0.232 Sum_probs=70.2
Q ss_pred cCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc---------------------chhcHHH
Q 010286 62 DTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA---------------------LKINTNL 120 (513)
Q Consensus 62 ~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~---------------------~d~n~~l 120 (513)
+..++++||.||++||++|+.+.|.+++++++ . +.++.|+++ .+.+..+
T Consensus 55 ~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-~---------v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 124 (176)
T 3kh7_A 55 DLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ-G---------VVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTL 124 (176)
T ss_dssp GGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-T---------CEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHH
T ss_pred HhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC-C---------CEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchH
Confidence 33468899999999999999999999999875 1 566667642 1345678
Q ss_pred HHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 121 CDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 121 c~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
++.|+|.++|+++++ ++|++ +..+.|..+.+++.++|.+.+.
T Consensus 125 ~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 125 GLDLGVYGAPETYLIDKQGII-------------RHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp HHHHTCCSSCEEEEECTTCBE-------------EEEEESCCCHHHHHHHTHHHHH
T ss_pred HHHcCCCCCCeEEEECCCCeE-------------EEEEcCCCCHHHHHHHHHHHHH
Confidence 999999999977776 45533 3456788899999888887664
No 172
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.05 E-value=2.7e-10 Score=100.54 Aligned_cols=75 Identities=15% Similarity=0.192 Sum_probs=59.5
Q ss_pred HhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh-----------------------
Q 010286 60 LRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI----------------------- 116 (513)
Q Consensus 60 l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~----------------------- 116 (513)
+.+.+++++||.|||+||++|+.+.|.++++++.+.+. .+.++.|+++.+.
T Consensus 27 l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~------~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~ 100 (143)
T 4fo5_A 27 FHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD------KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLG 100 (143)
T ss_dssp SCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT------TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTG
T ss_pred HHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC------CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccc
Confidence 33445689999999999999999999999999998742 4888888875321
Q ss_pred -cHHHHHHCCCCccceEEEec-CCcc
Q 010286 117 -NTNLCDKFSVGHYPMLLWGS-PSKF 140 (513)
Q Consensus 117 -n~~lc~~f~I~~~PTl~~f~-~g~~ 140 (513)
+.++++.|+|.++||++++. +|++
T Consensus 101 ~~~~~~~~~~v~~~P~~~lid~~G~i 126 (143)
T 4fo5_A 101 KESELYKKYDLRKGFKNFLINDEGVI 126 (143)
T ss_dssp GGSHHHHHTTGGGCCCEEEECTTSBE
T ss_pred cchHHHHHcCCCCCCcEEEECCCCEE
Confidence 13688999999999888875 5544
No 173
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.62 E-value=2e-11 Score=107.34 Aligned_cols=73 Identities=18% Similarity=0.363 Sum_probs=58.2
Q ss_pred CC-eEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh-----------------------cHHH
Q 010286 65 AT-YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-----------------------NTNL 120 (513)
Q Consensus 65 ~~-~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-----------------------n~~l 120 (513)
++ ++||.|||+||++|+.+.|.++++++.+++.+ ..+.++.|+++.+. +.++
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~----~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDS----APFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNV 100 (143)
Confidence 46 89999999999999999999999999985321 34778888875321 1479
Q ss_pred HHHCCCCccceEEEec-CCccc
Q 010286 121 CDKFSVGHYPMLLWGS-PSKFV 141 (513)
Q Consensus 121 c~~f~I~~~PTl~~f~-~g~~~ 141 (513)
++.|+|.++||++++. +|++.
T Consensus 101 ~~~~~v~~~P~~~lid~~G~i~ 122 (143)
T 2lus_A 101 TAKYGITGIPALVIVKKDGTLI 122 (143)
Confidence 9999999999999986 66543
No 174
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.04 E-value=1.7e-10 Score=94.08 Aligned_cols=74 Identities=12% Similarity=0.129 Sum_probs=59.6
Q ss_pred EEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccceEEEecCCcccCCCCCCc
Q 010286 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPN 148 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~ 148 (513)
++.||++|||+|+.++|.+++++.++ +..||+ ++++++..+|+++ +||+++ .+|+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------------~~~vdi--d~~~~l~~~~g~~-vPtl~~-~~G~~-------- 58 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------------FFSVFI--DDDAALESAYGLR-VPVLRD-PMGRE-------- 58 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------------EEEEEC--TTCHHHHHHHTTT-CSEEEC-TTCCE--------
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------------eEEEEC--CCCHHHHHHhCCC-cCeEEE-ECCEE--------
Confidence 78999999999999999998875431 467897 4688999999998 999987 65532
Q ss_pred cccchhhhccCcCCHHHHHHHHHHhc
Q 010286 149 QEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 149 ~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+ .|..+.+.|.++|++.+
T Consensus 59 -----v---~g~~~~~~L~~~l~~~~ 76 (87)
T 1ttz_A 59 -----L---DWPFDAPRLRAWLDAAP 76 (87)
T ss_dssp -----E---ESCCCHHHHHHHHHTCC
T ss_pred -----E---eCCCCHHHHHHHHHHHH
Confidence 1 26788899999997655
No 175
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.99 E-value=8.3e-10 Score=99.30 Aligned_cols=97 Identities=9% Similarity=0.115 Sum_probs=72.7
Q ss_pred CCCeEEEEEecCCCHH-HhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------------hh
Q 010286 64 PATYAVVEFFANWCPA-CRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KI 116 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~-Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--------------------------d~ 116 (513)
.++++||.||++||++ |+...|.++++++++++.. ....+.++.|+++. +.
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~--~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~ 99 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSIT--TLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREE 99 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSS--SSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhcc--CCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHH
Confidence 4689999999999998 9999999999999986310 00248888888753 12
Q ss_pred cHHHHHHCCCCccc---------------eEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 117 NTNLCDKFSVGHYP---------------MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 117 n~~lc~~f~I~~~P---------------Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
...+++.|+|.+.| +++++ ++|++ +..+.|..+.++|.+.|++.+.
T Consensus 100 ~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 100 VDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEF-------------LDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCE-------------EEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeE-------------EEEeCCCCCHHHHHHHHHHHHH
Confidence 23588999999999 55555 55543 3456777889999999988764
No 176
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.99 E-value=9.3e-10 Score=104.96 Aligned_cols=117 Identities=12% Similarity=0.127 Sum_probs=80.9
Q ss_pred cceecCcccHHHHHhcCCCC-eEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-----------
Q 010286 47 HAVELNATNFDAVLRDTPAT-YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----------- 114 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~-~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----------- 114 (513)
.+..++++.+. +.+..++ ++||.||++||++|+.+.|.++++++++.+. .+.|+.|+++.
T Consensus 42 ~l~~~~G~~v~--l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~Vs~d~~~~~~~d~~~~ 113 (218)
T 3u5r_E 42 VLPDAGGNLFT--LAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ------GLAVVAINSNDAQAFPEETLER 113 (218)
T ss_dssp CEECTTCCEEC--GGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT------TEEEEEEECSCTTTCGGGSHHH
T ss_pred EeECCCCCEEe--HHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC------CcEEEEEECCcccccccCCHHH
Confidence 34445554433 3333456 4999999999999999999999999999752 38899998841
Q ss_pred ----------------hhcHHHHHHCCCCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 115 ----------------KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 115 ----------------d~n~~lc~~f~I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
|.+.++++.|+|.++|+++++ ++|++...+.... . .....+..+.++|.+.|++.+.
T Consensus 114 ~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~---~-~~~~~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 114 VGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDD---A-RPGNGKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp HHHHHHHHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEECSSS---C-CTTSCCCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEeccccc---c-ccccccccCHHHHHHHHHHHHc
Confidence 235689999999999999998 5665542110000 0 0012345667899999988774
No 177
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.96 E-value=1.6e-09 Score=105.29 Aligned_cols=98 Identities=9% Similarity=0.111 Sum_probs=77.8
Q ss_pred ccHHHHHhcCCCCeEEEEEecCC--CHHHhhhhHHHHHHHHHhCCCCCCCCCe--EEEEEEeccchhcHHHHHHCCCCcc
Q 010286 54 TNFDAVLRDTPATYAVVEFFANW--CPACRNYKPQYEKVARLFNGPNAAHPGI--ILMTRVDCALKINTNLCDKFSVGHY 129 (513)
Q Consensus 54 ~~f~~~l~~~~~~~vLV~FyA~W--Cg~Ck~~~P~~~~lA~~~~~~~~~~~~~--v~~~~VDc~~d~n~~lc~~f~I~~~ 129 (513)
+.|++.+..- .++++|.||++| |++|+.+.|.++++|+..... .++ |.|+.+|+ ++++++|++|+|+++
T Consensus 15 ~ql~~~~~~~-~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~----~~~~~v~~~~vd~--d~~~~~~~~~gv~~~ 87 (243)
T 2hls_A 15 RELRETLAEM-VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTR----NGGKLLKLNVYYR--ESDSDKFSEFKVERV 87 (243)
T ss_dssp HHHHHHHTTC-CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEE----TTEESEEEEEEET--TTTHHHHHHTTCCSS
T ss_pred HHHHHHHHhC-CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCC----CCCceeEEEEecC--CcCHHHHHhcCCCcC
Confidence 5566666554 468999999999 999999999999999885210 133 99999997 468899999999999
Q ss_pred ceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 130 PMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 130 PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
||+++| +| ...|.|.++.+.+..|+...+
T Consensus 88 Pt~~i~-~g---------------~~~~~G~~~~~~l~~fv~~~l 116 (243)
T 2hls_A 88 PTVAFL-GG---------------EVRWTGIPAGEEIRALVEVIM 116 (243)
T ss_dssp SEEEET-TT---------------TEEEESCCCTTHHHHHHHHHH
T ss_pred CEEEEE-CC---------------ceeEcCCCcHHHHHHHHHHHH
Confidence 999998 43 134677777788888887765
No 178
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.94 E-value=1.2e-09 Score=99.62 Aligned_cols=92 Identities=10% Similarity=0.083 Sum_probs=66.2
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---------hhcHHHH-------------
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------KINTNLC------------- 121 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---------d~n~~lc------------- 121 (513)
+++++||.|||+||++|+ ..|.++++++++.+. .+.++.|+++. +...+.+
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~------~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d 103 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE------GFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKK 103 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG------TEEEEEEEECSCC------------------CCCSCBBCC
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC------CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEee
Confidence 468999999999999999 999999999999742 38888887631 1111222
Q ss_pred -----------------HHCCCCccc------eEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 122 -----------------DKFSVGHYP------MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 122 -----------------~~f~I~~~P------Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+.|+|.++| +++++ ++|++ +..+.|..+.++|.+.|++.+.
T Consensus 104 ~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i-------------~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 104 IDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKV-------------YERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp CBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCE-------------EEEECTTSCGGGGHHHHHHHHT
T ss_pred ccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCE-------------EEEeCCCCCHHHHHHHHHHHHH
Confidence 247888999 66665 55543 3456677888889998888764
No 179
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.93 E-value=2.2e-09 Score=97.32 Aligned_cols=98 Identities=9% Similarity=0.110 Sum_probs=73.6
Q ss_pred CCCCeEEEEEecCCCHH-HhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--------------------------
Q 010286 63 TPATYAVVEFFANWCPA-CRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK-------------------------- 115 (513)
Q Consensus 63 ~~~~~vLV~FyA~WCg~-Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d-------------------------- 115 (513)
.+++++||.||++||++ |+...|.++++++.+.+.. ....+.++.|+++.+
T Consensus 24 ~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~--~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~ 101 (171)
T 2rli_A 24 FRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEP--GLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTK 101 (171)
T ss_dssp TTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHST--TSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHH
T ss_pred hCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhcc--CCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHH
Confidence 34689999999999998 9999999999999985310 002488888887521
Q ss_pred hcHHHHHHCCCCccc---------------eEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 116 INTNLCDKFSVGHYP---------------MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 116 ~n~~lc~~f~I~~~P---------------Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
....+++.|+|...| +++++ ++|++ +..+.|..+.++|.+.|++.+.
T Consensus 102 ~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 102 QVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLF-------------TDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCE-------------EEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeE-------------EEEECCCCCHHHHHHHHHHHHH
Confidence 123689999999988 66665 55543 3456788889999999988764
No 180
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.91 E-value=2.2e-09 Score=97.13 Aligned_cols=93 Identities=8% Similarity=0.069 Sum_probs=67.4
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---------hhcHHHHH-HC---------
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------KINTNLCD-KF--------- 124 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---------d~n~~lc~-~f--------- 124 (513)
+++++||.||++||++|+...|.++++++++.+. .+.++.|+++. +.-.+.++ +|
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~------~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ------GLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDK 104 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCC
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC------CEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEee
Confidence 4689999999999999999999999999999742 38899998741 11233344 44
Q ss_pred --------------------CC--Cccc---eEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 125 --------------------SV--GHYP---MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 125 --------------------~I--~~~P---Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+| .++| |++++ ++|++ +..+.|..+.++|.+.|++.+.
T Consensus 105 ~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i-------------~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 105 IDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQV-------------VDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp CBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCE-------------EEEECTTSCGGGGHHHHHHHTT
T ss_pred eccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCE-------------EEeeCCCCCHHHHHHHHHHHhh
Confidence 34 5567 65555 44533 3456777888899999988764
No 181
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.91 E-value=2.4e-09 Score=99.66 Aligned_cols=107 Identities=5% Similarity=-0.002 Sum_probs=73.9
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---------hhcH
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------KINT 118 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---------d~n~ 118 (513)
+..++++.+. +.+.+++++||.||++||++|+...|.++++++++.+. .+.++.|+++. +.-.
T Consensus 33 l~~~~G~~~~--l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~------~v~vv~vs~d~~~~~~~~~~~~~~ 104 (190)
T 2vup_A 33 VLDADHKPYN--LVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ------GFTVLAFPCNQFGGQEPGNEEEIK 104 (190)
T ss_dssp CBBTTSSBCC--GGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TCEEEEEECCCSTTCCCSCHHHHH
T ss_pred EEcCCCCEEE--HHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC------CeEEEEEEcCccCCCCCCCHHHHH
Confidence 3344444333 23334689999999999999999999999999999742 38888888751 1112
Q ss_pred HHH-HH-----------------------------CCCCccc------eEEEe-cCCcccCCCCCCccccchhhhccCcC
Q 010286 119 NLC-DK-----------------------------FSVGHYP------MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQ 161 (513)
Q Consensus 119 ~lc-~~-----------------------------f~I~~~P------Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~ 161 (513)
+.+ ++ |+|.++| +++++ ++|++ +..+.|..
T Consensus 105 ~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i-------------~~~~~g~~ 171 (190)
T 2vup_A 105 EFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVP-------------VERFSPGA 171 (190)
T ss_dssp HHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCE-------------EEEECTTC
T ss_pred HHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcE-------------EEEECCCC
Confidence 233 22 4777888 55554 55533 34567788
Q ss_pred CHHHHHHHHHHhcc
Q 010286 162 TADGLLTWINKQTS 175 (513)
Q Consensus 162 ~~e~L~~~i~~~l~ 175 (513)
+.++|.+.|++.+.
T Consensus 172 ~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 172 SVKDIEKKLIPLLE 185 (190)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 89999999988764
No 182
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.90 E-value=1.8e-09 Score=100.30 Aligned_cols=109 Identities=4% Similarity=-0.042 Sum_probs=72.7
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------hhcHH
Q 010286 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------KINTN 119 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------d~n~~ 119 (513)
..+..++++.+. +.+.+++++||+|||+||++|+.+.|.++++++++++. .+.++.|+++. +...+
T Consensus 29 f~l~d~~G~~~~--l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~------~~~vi~is~d~~~~~e~~~~~~ 100 (187)
T 3dwv_A 29 FEVLDADHKPYN--LVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ------GFTVLAFPSNQFGGQEPGNEEE 100 (187)
T ss_dssp SCCBBTTSCBCC--GGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG------TCEEEEEEBCCCSSCSSSBTTH
T ss_pred eEEEcCCCCEee--HHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC------CeEEEEEECcccCCCCCCCHHH
Confidence 344455555443 33335689999999999999999999999999999753 37888887641 11111
Q ss_pred HH---H-H--------------------------------CCCCccc---eEEEe-cCCcccCCCCCCccccchhhhccC
Q 010286 120 LC---D-K--------------------------------FSVGHYP---MLLWG-SPSKFVAGSWEPNQEKKEIRALED 159 (513)
Q Consensus 120 lc---~-~--------------------------------f~I~~~P---Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~g 159 (513)
+. + + +++.++| |++++ ++|++ +..+.|
T Consensus 101 ~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i-------------~~~~~g 167 (187)
T 3dwv_A 101 IKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVP-------------VERFSP 167 (187)
T ss_dssp HHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCE-------------EEEECT
T ss_pred HHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCE-------------EEEECC
Confidence 11 1 1 2344566 66665 45533 345678
Q ss_pred cCCHHHHHHHHHHhcc
Q 010286 160 WQTADGLLTWINKQTS 175 (513)
Q Consensus 160 ~~~~e~L~~~i~~~l~ 175 (513)
..+.++|.+.|++.+.
T Consensus 168 ~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 168 GASVKDIEEKLIPLLG 183 (187)
T ss_dssp TCCHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHh
Confidence 8899999999988875
No 183
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.89 E-value=5.2e-10 Score=95.23 Aligned_cols=88 Identities=16% Similarity=0.204 Sum_probs=57.7
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhc-----HHHHHHCCCCc
Q 010286 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSVGH 128 (513)
Q Consensus 54 ~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n-----~~lc~~f~I~~ 128 (513)
+.+++.+.. +.++| ||++|||+|+.+.|.+++++.. +.++.||. +.+ .+++++|+|.+
T Consensus 11 ~~~~~~~~~---~~vv~-f~a~~C~~C~~~~~~l~~~~~~-----------~~~v~v~~--~~~~~~~~~~l~~~~~v~~ 73 (116)
T 2e7p_A 11 KKAKELASS---APVVV-FSKTYCGYCNRVKQLLTQVGAS-----------YKVVELDE--LSDGSQLQSALAHWTGRGT 73 (116)
T ss_dssp HHHHHHHTS---SSEEE-EECTTCHHHHHHHHHHHHHTCC-----------CEEEEGGG--STTHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHcC---CCEEE-EECCCChhHHHHHHHHHHcCCC-----------eEEEEccC--CCChHHHHHHHHHHhCCCC
Confidence 344555543 34555 9999999999999999887432 34555554 333 57999999999
Q ss_pred cceEEEecCCcccCCCCCCccccchhhhccCcC---CHHHHHHHHHHh
Q 010286 129 YPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQ---TADGLLTWINKQ 173 (513)
Q Consensus 129 ~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~---~~e~L~~~i~~~ 173 (513)
+||+ |.+|+... .+.|.. +.+.|.++|++.
T Consensus 74 ~Pt~--~~~g~~v~-------------~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 74 VPNV--FIGGKQIG-------------GCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp SCEE--EETTEEEE-------------CHHHHHHHHHTTCHHHHHHHT
T ss_pred cCEE--EECCEEEC-------------ChHHHHHHHhCChHHHHHHHc
Confidence 9999 34554332 222222 556677777653
No 184
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.39 E-value=2.1e-10 Score=103.09 Aligned_cols=91 Identities=14% Similarity=0.254 Sum_probs=61.1
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHH-HHHHhCCCCCCCCCeEEEEEEeccchh--------------------cHHHHH
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEK-VARLFNGPNAAHPGIILMTRVDCALKI--------------------NTNLCD 122 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~-lA~~~~~~~~~~~~~v~~~~VDc~~d~--------------------n~~lc~ 122 (513)
+++++||.||++||++|+.+.|.+++ +++.+... ..+.++.|+++.+. +..+.+
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~-----~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDN-----ADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFA 106 (159)
Confidence 45789999999999999999999998 88887611 34888888875321 112333
Q ss_pred HCC--CCccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHh
Q 010286 123 KFS--VGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (513)
Q Consensus 123 ~f~--I~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~ 173 (513)
.|+ +.++||++++ ++|++. ..+.| .+.+++.++|++.
T Consensus 107 ~~~~~~~~~P~~~lid~~G~i~-------------~~~~g-~~~~~l~~~l~~l 146 (159)
T 2ls5_A 107 KYALRDAGITRNVLIDREGKIV-------------KLTRL-YNEEEFASLVQQI 146 (159)
Confidence 444 5779998887 555433 23334 4555666666543
No 185
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.87 E-value=4e-09 Score=95.21 Aligned_cols=85 Identities=9% Similarity=0.102 Sum_probs=63.6
Q ss_pred ceecCcccHHHHHhcCCCCe-EEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-----------
Q 010286 48 AVELNATNFDAVLRDTPATY-AVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----------- 114 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~-vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----------- 114 (513)
+..++++.+. +.+..+++ +||.|| ++||++|+...|.++++++++++. .+.++.|+++.
T Consensus 13 l~~~~G~~~~--l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~------~v~vv~vs~d~~~~~~~~~~~~ 84 (161)
T 3drn_A 13 GIADNGEKIS--LSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY------DVVVIGVSSDDINSHKRFKEKY 84 (161)
T ss_dssp EEETTSCEEE--GGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT------CEEEEEEESCCHHHHHHHHHHT
T ss_pred eecCCCCEEE--HHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc------CCEEEEEeCCCHHHHHHHHHHh
Confidence 3444444332 33334566 999999 999999999999999999999743 38888888742
Q ss_pred --------hhcHHHHHHCCCCc----cceEEEe-cCCcc
Q 010286 115 --------KINTNLCDKFSVGH----YPMLLWG-SPSKF 140 (513)
Q Consensus 115 --------d~n~~lc~~f~I~~----~PTl~~f-~~g~~ 140 (513)
+.+.++++.|+|.+ +|+++++ ++|++
T Consensus 85 ~~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i 123 (161)
T 3drn_A 85 KLPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGII 123 (161)
T ss_dssp TCCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBE
T ss_pred CCCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCEE
Confidence 14568999999999 9988887 46644
No 186
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.86 E-value=2.4e-09 Score=98.80 Aligned_cols=46 Identities=11% Similarity=0.092 Sum_probs=39.7
Q ss_pred cCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010286 62 DTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (513)
Q Consensus 62 ~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (513)
+.+++++||.||++||++|+...|.++++++++.+. .+.++.|+++
T Consensus 46 ~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~------~v~vv~vs~d 91 (181)
T 2p31_A 46 KYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH------HFNVLAFPCN 91 (181)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred HcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC------CEEEEEEECc
Confidence 334689999999999999999999999999999742 3889999874
No 187
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.85 E-value=2.5e-09 Score=96.92 Aligned_cols=98 Identities=11% Similarity=0.114 Sum_probs=71.1
Q ss_pred HhcCCCCeEEEEEecCCCHH-HhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh-c--------------------
Q 010286 60 LRDTPATYAVVEFFANWCPA-CRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-N-------------------- 117 (513)
Q Consensus 60 l~~~~~~~vLV~FyA~WCg~-Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-n-------------------- 117 (513)
+.+.+++++||.||++||++ |+.+.|.++++++++.+.. ...+.++.|+++.+. .
T Consensus 30 l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~---~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d 106 (172)
T 2k6v_A 30 LSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKA---QERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSG 106 (172)
T ss_dssp GGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHH---HTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECC
T ss_pred HHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhc---cCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeC
Confidence 33445689999999999997 9999999999998886310 014889999975321 1
Q ss_pred -----HHHHHHCCC---------------CccceEEEecCCcccCCCCCCccccchhhhccCcC--CHHHHHHHHHHh
Q 010286 118 -----TNLCDKFSV---------------GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQ--TADGLLTWINKQ 173 (513)
Q Consensus 118 -----~~lc~~f~I---------------~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~--~~e~L~~~i~~~ 173 (513)
.++++.|++ .++||++++.+|++. ..+.|.. +.++|.+.|++.
T Consensus 107 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~-------------~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 107 SPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLV-------------LLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEE-------------EEECHHHHTCHHHHHHHHHHC
T ss_pred CHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEE-------------EEECCCCCCCHHHHHHHHHHh
Confidence 467777664 678999988765432 3456666 888999888764
No 188
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.85 E-value=4.6e-09 Score=94.81 Aligned_cols=44 Identities=14% Similarity=0.156 Sum_probs=38.9
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (513)
+++++||.||++||++|+...|.++++++++.+ ..+.++.|+++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~d 73 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVG------KGLRILAFPCN 73 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECC
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhc------CCeEEEEEECC
Confidence 468999999999999999999999999999974 24889999874
No 189
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.82 E-value=8.8e-09 Score=94.80 Aligned_cols=59 Identities=10% Similarity=0.133 Sum_probs=45.2
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (513)
.+..++++.+. +.+.+++++||.|||+||++|+...|.++++++++++. .+.++.|+++
T Consensus 22 ~l~d~~G~~v~--l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~------~~~vi~is~d 80 (180)
T 3kij_A 22 EVKDAKGRTVS--LEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS------HFSVLAFPCN 80 (180)
T ss_dssp EEEBTTSCEEE--GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT------SEEEEEEECC
T ss_pred EEecCCCCEec--HHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC------CeEEEEEECC
Confidence 34445554443 33335689999999999999999999999999999752 4888888764
No 190
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.81 E-value=5.4e-09 Score=93.79 Aligned_cols=72 Identities=8% Similarity=0.049 Sum_probs=57.0
Q ss_pred CCC-eEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------h--hcHHH
Q 010286 64 PAT-YAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------K--INTNL 120 (513)
Q Consensus 64 ~~~-~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------------------d--~n~~l 120 (513)
.++ ++||.|| ++||++|+...|.+.++++++.+ ..+.++.|+++. + .+.++
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 107 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEN------DDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAV 107 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSS------SSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHH
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHH------CCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHH
Confidence 355 8999998 99999999999999999999864 248888888753 1 16779
Q ss_pred HHHCCCC----ccc--eEEEe-cCCccc
Q 010286 121 CDKFSVG----HYP--MLLWG-SPSKFV 141 (513)
Q Consensus 121 c~~f~I~----~~P--Tl~~f-~~g~~~ 141 (513)
++.|+|. ++| +++++ ++|++.
T Consensus 108 ~~~~~v~~~~~~~p~~~~~lid~~G~i~ 135 (160)
T 1xvw_A 108 SQAYGVFNEQAGIANRGTFVVDRSGIIR 135 (160)
T ss_dssp HHHTTCEETTTTEECSEEEEECTTSBEE
T ss_pred HHHcCCccccCCCeeeeEEEECCCCeEE
Confidence 9999999 999 55554 566543
No 191
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.80 E-value=3.8e-09 Score=84.04 Aligned_cols=61 Identities=15% Similarity=0.220 Sum_probs=47.2
Q ss_pred EEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccceEEEecCCc
Q 010286 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSK 139 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PTl~~f~~g~ 139 (513)
++.||++|||+|+.+.|.++++++++. ..+.+..||.+ .++.+++++|||+++||+++ +|+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~~-~~~~~~~~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSK-------YTVEIVHLGTD-KARIAEAEKAGVKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTT-------EEEEEEETTTC-SSTHHHHHHHTCCEEEEEEE--TTE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcC-------CeEEEEEecCC-hhhHHHHHHcCCCcCCEEEE--CCE
Confidence 788999999999999999998876543 23555555531 15788999999999999987 553
No 192
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.78 E-value=2.4e-09 Score=89.45 Aligned_cols=81 Identities=16% Similarity=0.281 Sum_probs=62.1
Q ss_pred CeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccceEEEecCCcccCCCC
Q 010286 66 TYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSW 145 (513)
Q Consensus 66 ~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~ 145 (513)
.+.++.|+++|||+|+.+.|.++++++ .+.+..||++.+++.++..+|+ .++|++++ +|+.
T Consensus 16 ~~~v~~f~~~~C~~C~~~~~~L~~l~~-----------~i~~~~vdi~~~~~~el~~~~g-~~vP~l~~--~g~~----- 76 (100)
T 1wjk_A 16 LPVLTLFTKAPCPLCDEAKEVLQPYKD-----------RFILQEVDITLPENSTWYERYK-FDIPVFHL--NGQF----- 76 (100)
T ss_dssp CCEEEEEECSSCHHHHHHHHHTSTTSS-----------SSEEEEEETTSSTTHHHHHHSS-SSCSEEEE--SSSE-----
T ss_pred CCEEEEEeCCCCcchHHHHHHHHHhhh-----------CCeEEEEECCCcchHHHHHHHC-CCCCEEEE--CCEE-----
Confidence 567999999999999999999887542 2678899986336789999999 99998743 4421
Q ss_pred CCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 146 EPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 146 ~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+ ..+..+.+.|.++|++.+.
T Consensus 77 --------~--~~~g~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 77 --------L--MMHRVNTSKLEKQLRKLSG 96 (100)
T ss_dssp --------E--EESSCCHHHHHHHHHSSSC
T ss_pred --------E--EecCCCHHHHHHHHHHHHh
Confidence 1 2355788899999987653
No 193
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.77 E-value=7.7e-09 Score=95.39 Aligned_cols=58 Identities=12% Similarity=0.142 Sum_probs=44.2
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (513)
+..++++.+. +.+.+++++||.||++||++|+...|.++++++++++ ..+.++.|+++
T Consensus 32 l~~~~G~~~~--l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~------~~v~vv~vs~d 89 (183)
T 2obi_A 32 AKDIDGHMVN--LDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAE------CGLRILAFPCN 89 (183)
T ss_dssp EEBTTSCEEE--GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECC
T ss_pred EEcCCCCEee--HHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhc------CCeEEEEEECC
Confidence 3444444333 2333468999999999999999999999999999974 23888999874
No 194
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.76 E-value=1.3e-08 Score=96.51 Aligned_cols=44 Identities=11% Similarity=0.109 Sum_probs=39.0
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (513)
+++++||+|||+|||+|+...|.++++++++++. .+.|+.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~------g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR------GLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC------CeEEEEEECC
Confidence 4689999999999999999999999999999742 3889999884
No 195
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.76 E-value=1.7e-08 Score=96.10 Aligned_cols=84 Identities=14% Similarity=0.262 Sum_probs=62.0
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEe--------------------------------
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVD-------------------------------- 111 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VD-------------------------------- 111 (513)
+++++|++||++|||+|+++.|.++++++. + +.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~-~---------v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~ 154 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL-G---------ITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMA 154 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT-T---------EEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC-C---------cEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHh
Confidence 457899999999999999999999998752 1 2222221
Q ss_pred --------c--cchhcHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 112 --------C--ALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 112 --------c--~~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
| ..+++.++++++||+++||++ +.+| ..+.|..+.++|.++|++..
T Consensus 155 ~~~~~~~~~~~~v~~~~~l~~~~gV~gtPt~v-~~dG----------------~~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 155 GKSVAPASCDVDIADHYALGVQLGVSGTPAVV-LSNG----------------TLVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp TCCCCCCCCSCCHHHHHHHHHHHTCCSSSEEE-CTTS----------------CEEESCCCHHHHHHHHHHHH
T ss_pred CCCCChhHHHHHHHHHHHHHHHcCCCccCEEE-EcCC----------------eEecCCCCHHHHHHHHHHhh
Confidence 2 124567899999999999994 4444 13567888999999987654
No 196
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.75 E-value=8.8e-09 Score=95.32 Aligned_cols=93 Identities=11% Similarity=0.075 Sum_probs=71.8
Q ss_pred CCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-----------------------hhcHH
Q 010286 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-----------------------KINTN 119 (513)
Q Consensus 64 ~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-----------------------d~n~~ 119 (513)
.++++||.|| ++||++|+...|.++++++++.+. .+.++.|+++. +.+.+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~------~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 103 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL------GVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQT 103 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT------TEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCH
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc------CCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchH
Confidence 4589999999 999999999999999999999742 38888888753 11457
Q ss_pred HHHHCCCC------ccceEEEe-cCCcccCCCCCCccccchhhhccCc----CCHHHHHHHHHHhcc
Q 010286 120 LCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDW----QTADGLLTWINKQTS 175 (513)
Q Consensus 120 lc~~f~I~------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~----~~~e~L~~~i~~~l~ 175 (513)
+++.|+|. ++|+++++ ++|++. ..+.|. ++.++|.+.|++...
T Consensus 104 ~~~~~~v~~~~~g~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 104 ISRQFDVLNEETGLADRGTFIIDPDGVIQ-------------AIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEE-------------EEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred HHHHhCCCcCCCCceeeEEEEECCCCeEE-------------EEEecCCCCCCCHHHHHHHHHHHhh
Confidence 89999999 99999998 566543 223332 378888888887653
No 197
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.75 E-value=1.2e-08 Score=95.26 Aligned_cols=93 Identities=15% Similarity=0.174 Sum_probs=72.3
Q ss_pred CCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-----------------------hhcHH
Q 010286 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-----------------------KINTN 119 (513)
Q Consensus 64 ~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-----------------------d~n~~ 119 (513)
.++++||.|| ++||++|+...|.+.++++++.+. .+.++.|+++. +.+.+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 117 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR------DAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRE 117 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchH
Confidence 4689999999 999999999999999999999742 48888888753 12457
Q ss_pred HHHHCCCC-----ccceEEEe-cCCcccCCCCCCccccchhhhccCc----CCHHHHHHHHHHhcc
Q 010286 120 LCDKFSVG-----HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDW----QTADGLLTWINKQTS 175 (513)
Q Consensus 120 lc~~f~I~-----~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~----~~~e~L~~~i~~~l~ 175 (513)
+++.|+|. ++|+++++ ++|++. ..+.|. .+.++|.+.|++...
T Consensus 118 ~~~~~~v~~~~g~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 118 LSQAAGVLNADGVADRVTFIVDPNNEIQ-------------FVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp HHHHHTCBCTTSSBCEEEEEECTTSBEE-------------EEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred HHHHhCCcccCCCccceEEEEcCCCeEE-------------EEEecCCCCCCCHHHHHHHHHHHhh
Confidence 88999999 99999888 456443 223332 378999999987764
No 198
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.73 E-value=1.6e-08 Score=93.60 Aligned_cols=59 Identities=8% Similarity=0.017 Sum_probs=46.2
Q ss_pred CCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---------hhcHHHHHHCCCC
Q 010286 63 TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------KINTNLCDKFSVG 127 (513)
Q Consensus 63 ~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---------d~n~~lc~~f~I~ 127 (513)
.+++++||.||++||++|+...|.++++++++++ ..+.++.|+++. ++-.+.++++++.
T Consensus 47 ~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~------~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~ 114 (185)
T 2gs3_A 47 YRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAE------CGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVK 114 (185)
T ss_dssp GTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCC
T ss_pred cCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhc------CCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCC
Confidence 3468999999999999999999999999999974 238899998742 1224566666664
No 199
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.72 E-value=2.7e-08 Score=79.52 Aligned_cols=77 Identities=19% Similarity=0.269 Sum_probs=58.7
Q ss_pred EEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh--cHHHHHHCC--CCccceEEEecCCcccCCC
Q 010286 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFS--VGHYPMLLWGSPSKFVAGS 144 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~--n~~lc~~f~--I~~~PTl~~f~~g~~~~~~ 144 (513)
++.|+++|||+|+++.|.+++++.++. .+.+..+|++.+. ..++.++++ +.++||+++ +|+..
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~--------~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~~--~g~~i--- 69 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD--------DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFV--DQQHI--- 69 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS--------SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEEE--TTEEE---
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC--------CceEEEEecccChHHHHHHHHHhCCCCceeCeEEE--CCEEE---
Confidence 688999999999999999999998874 3788999985322 247999999 999999843 44221
Q ss_pred CCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 145 WEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 145 ~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
.| .++|.+++++.+
T Consensus 70 -------------~~---~~~l~~~~~~~~ 83 (85)
T 1ego_A 70 -------------GG---YTDFAAWVKENL 83 (85)
T ss_dssp -------------ES---SHHHHHHHHHHH
T ss_pred -------------EC---HHHHHHHHHHhc
Confidence 22 367888887654
No 200
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.71 E-value=5e-08 Score=89.13 Aligned_cols=86 Identities=15% Similarity=0.263 Sum_probs=65.8
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc------------------------------
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA------------------------------ 113 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~------------------------------ 113 (513)
.++++|++|+++|||+|+++.|.++++.+++. .+.+..++..
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~--------~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf 92 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP--------NVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALM 92 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCC--------CEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 35788999999999999999999999988864 2444444421
Q ss_pred -------------------------------------chhcHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhh
Q 010286 114 -------------------------------------LKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRA 156 (513)
Q Consensus 114 -------------------------------------~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~ 156 (513)
.+.+.++++++||.++||+++ +| ..
T Consensus 93 ~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g----------------~~ 154 (175)
T 3gyk_A 93 GMSGKANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--ED----------------AL 154 (175)
T ss_dssp TCSSCCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TT----------------EE
T ss_pred hcCCCCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CC----------------EE
Confidence 134566888999999999987 33 23
Q ss_pred ccCcCCHHHHHHHHHHhcc
Q 010286 157 LEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 157 ~~g~~~~e~L~~~i~~~l~ 175 (513)
+.|..+.+.|.+.|++.+.
T Consensus 155 ~~G~~~~~~l~~~i~~~l~ 173 (175)
T 3gyk_A 155 VPGFVEQSQLQDAVDRARK 173 (175)
T ss_dssp ECSCCCHHHHHHHHHHHHH
T ss_pred eeCCCCHHHHHHHHHHHHh
Confidence 5688899999999987653
No 201
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.71 E-value=3.6e-08 Score=106.29 Aligned_cols=96 Identities=13% Similarity=0.124 Sum_probs=75.7
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCc
Q 010286 49 VELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGH 128 (513)
Q Consensus 49 ~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~ 128 (513)
..++++.++.+.. ......++.||++|||+|+.+.|.+++++..+. .+.+..||. +++++++.+|+|++
T Consensus 102 ~~~~~~~~~~i~~-~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--------~v~~~~vd~--~~~~~~~~~~~i~s 170 (521)
T 1hyu_A 102 SKEAQSLLEQIRD-IDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--------RIKHTAIDG--GTFQNEITERNVMG 170 (521)
T ss_dssp CCSCHHHHHHHHH-CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--------TEEEEEEET--TTCHHHHHHTTCCS
T ss_pred CCCCHHHHHHHHh-cCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--------ceEEEEEec--hhhHHHHHHhCCCc
Confidence 3456666665543 334567899999999999999999999998863 489999996 57899999999999
Q ss_pred cceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHH
Q 010286 129 YPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (513)
Q Consensus 129 ~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~ 172 (513)
+||+++ +|+.. ..|..+.++|.+++.+
T Consensus 171 vPt~~i--~g~~~---------------~~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 171 VPAVFV--NGKEF---------------GQGRMTLTEIVAKVDT 197 (521)
T ss_dssp SSEEEE--TTEEE---------------EESCCCHHHHHHHHCC
T ss_pred cCEEEE--CCEEE---------------ecCCCCHHHHHHHHhh
Confidence 999977 55322 2377888999998854
No 202
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.71 E-value=1.2e-08 Score=95.41 Aligned_cols=92 Identities=13% Similarity=0.138 Sum_probs=71.0
Q ss_pred CCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------------hh
Q 010286 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KI 116 (513)
Q Consensus 64 ~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--------------------------d~ 116 (513)
+++++||.|| ++||++|+.+.|.++++++++.+. .+.++.|+++. +.
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 105 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK------GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADI 105 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECT
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc------CCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECC
Confidence 4689999999 999999999999999999999642 38888888752 11
Q ss_pred cHHHHHHCCCC-----ccceEEEe-cCCcccCCCCCCccccchhhhccCc----CCHHHHHHHHHHhc
Q 010286 117 NTNLCDKFSVG-----HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDW----QTADGLLTWINKQT 174 (513)
Q Consensus 117 n~~lc~~f~I~-----~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~----~~~e~L~~~i~~~l 174 (513)
+.++++.|+|. ++|+++++ ++|++. ..+.|. .+.++|.+.|++..
T Consensus 106 ~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 106 TKSISRDYDVLFEEAIALRGAFLIDKNMKVR-------------HAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp TSHHHHHTTCEETTTEECEEEEEEETTTEEE-------------EEEEESSSCCCHHHHHHHHHHHHH
T ss_pred chHHHHHhCCcccCCcccceEEEECCCCEEE-------------EEEecCCCCCCCHHHHHHHHHHHH
Confidence 45789999999 99988887 466543 223333 36788988888764
No 203
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.70 E-value=3.2e-08 Score=92.49 Aligned_cols=92 Identities=13% Similarity=0.129 Sum_probs=70.3
Q ss_pred CCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--------------------------h
Q 010286 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------I 116 (513)
Q Consensus 64 ~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--------------------------~ 116 (513)
.++++||.|| ++||++|+...|.+.++++++++. .+.++.|+++.. .
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~ 106 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL------GCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADV 106 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECT
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECC
Confidence 4588999999 999999999999999999999742 488888887531 1
Q ss_pred cHHHHHHCCCC------ccceEEEe-cCCcccCCCCCCccccchhhhccC----cCCHHHHHHHHHHhc
Q 010286 117 NTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALED----WQTADGLLTWINKQT 174 (513)
Q Consensus 117 n~~lc~~f~I~------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g----~~~~e~L~~~i~~~l 174 (513)
+.++++.|+|. ++|+++++ ++|++.. .+.| .++.+++++.|++..
T Consensus 107 ~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~-------------~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 107 TRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQ-------------ITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp TCHHHHHTTCEETTTTEECEEEEEECTTSBEEE-------------EEEECTTBCCCHHHHHHHHHHHH
T ss_pred cHHHHHHcCCccCCCCceeeEEEEECCCCcEEE-------------EEeCCCCCCCCHHHHHHHHHhcc
Confidence 34789999999 89988877 5554432 2222 457888988887654
No 204
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.66 E-value=4e-08 Score=92.25 Aligned_cols=96 Identities=11% Similarity=0.113 Sum_probs=70.9
Q ss_pred CCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--------------------------h
Q 010286 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------I 116 (513)
Q Consensus 64 ~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--------------------------~ 116 (513)
.++++||.|| ++||++|+...|.+.++++++++. .+.|+.|+++.. .
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~------~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~ 108 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI------GCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADK 108 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECT
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECC
Confidence 4589999999 999999999999999999999742 488888887531 1
Q ss_pred cHHHHHHCCCC------ccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 117 NTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 117 n~~lc~~f~I~------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+.++++.|+|. ++|+++++ ++|++... .+......++.+++.+.|++..
T Consensus 109 ~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~---------~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 109 TKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQI---------TVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp TCHHHHHHTCEETTTTEECEEEEEECTTSBEEEE---------EEECTTBCCCHHHHHHHHHHHH
T ss_pred chHHHHHcCCccCCCCceeeEEEEECCCCEEEEE---------EeCCCCCCCCHHHHHHHHHHhh
Confidence 45789999999 99988887 45544321 0011122357788988887654
No 205
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.64 E-value=4.2e-08 Score=93.65 Aligned_cols=96 Identities=11% Similarity=0.128 Sum_probs=71.7
Q ss_pred CCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--------------------------h
Q 010286 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------I 116 (513)
Q Consensus 64 ~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--------------------------~ 116 (513)
.++++||.|| ++||++|+...|.+.++++++.+. .+.|+.|+++.. .
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~ 128 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV------NCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDL 128 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECT
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECC
Confidence 4589999999 999999999999999999999642 388888887531 1
Q ss_pred cHHHHHHCCCC------ccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 117 NTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 117 n~~lc~~f~I~------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+.++++.|+|. .+|+++++ ++|++... .+......++.+++++.|++..
T Consensus 129 ~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~---------~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 129 TKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHL---------SVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp TSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE---------EEECTTCCCCHHHHHHHHHHHH
T ss_pred cHHHHHHhCCeecCCCcccceEEEECCCCEEEEE---------EecCCCCCCCHHHHHHHHHHhh
Confidence 45789999999 99999998 56654321 0111122367889998888765
No 206
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.62 E-value=5e-08 Score=91.51 Aligned_cols=111 Identities=15% Similarity=0.225 Sum_probs=69.9
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCCHH-HhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-----------
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPA-CRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----------- 114 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~-Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----------- 114 (513)
.+..++++.+. +.+..++++||.||++||++ |+...|.+.++.+.+.+.. .+.+.++.|+++.
T Consensus 25 ~l~d~~G~~v~--l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~---~~~v~vv~Is~D~~~d~~~~~~~~ 99 (200)
T 2b7k_A 25 HLEDMYGNEFT--EKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKY---GITLQPLFITCDPARDSPAVLKEY 99 (200)
T ss_dssp EEEETTSCEEE--GGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEEESCTTTCCHHHHHHH
T ss_pred EEEcCCCCEEe--HHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhh---CCceEEEEEECCCCCCCHHHHHHH
Confidence 34444444333 22334688999999999997 9999999999888775210 0247777777641
Q ss_pred ---------------hhcHHHHHHCCCC-ccc---------------eEEEe-cCCcccCCCCCCccccchhhhccCcCC
Q 010286 115 ---------------KINTNLCDKFSVG-HYP---------------MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQT 162 (513)
Q Consensus 115 ---------------d~n~~lc~~f~I~-~~P---------------Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~ 162 (513)
+....+++.|+|. +.| +++++ ++|++. ..+.|..+
T Consensus 100 ~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~-------------~~~~g~~~ 166 (200)
T 2b7k_A 100 LSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFV-------------DALGRNYD 166 (200)
T ss_dssp HTTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEE-------------EEECTTCC
T ss_pred HHHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEE-------------EEeCCCCC
Confidence 1235688899987 454 54544 555432 34566667
Q ss_pred HHHHHHHHHHhcc
Q 010286 163 ADGLLTWINKQTS 175 (513)
Q Consensus 163 ~e~L~~~i~~~l~ 175 (513)
.+.+.+.|.+.+.
T Consensus 167 ~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 167 EKTGVDKIVEHVK 179 (200)
T ss_dssp TTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777777777664
No 207
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.61 E-value=5.1e-08 Score=90.61 Aligned_cols=96 Identities=13% Similarity=0.163 Sum_probs=70.0
Q ss_pred CCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--------------------------h
Q 010286 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------I 116 (513)
Q Consensus 64 ~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--------------------------~ 116 (513)
+++++||.|| ++||++|+...|.+.++++++++. .+.++.|+++.. .
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~ 103 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER------NVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDI 103 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECT
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC------CCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECC
Confidence 4588999999 999999999999999999999642 378888887521 1
Q ss_pred cHHHHHHCCCC-----ccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 117 NTNLCDKFSVG-----HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 117 n~~lc~~f~I~-----~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+.++++.|+|. .+|+++++ ++|++... .+......++.+++.+.|++..
T Consensus 104 ~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~---------~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 104 SKSIARSYDVLFNESVALRAFVLIDKQGVVQHL---------LVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp TSHHHHHTTCEETTTEECCEEEEECTTSBEEEE---------EEGGGSSGGGHHHHHHHHHHHH
T ss_pred cHHHHHHhCCcCcCCceeeEEEEEcCCCEEEEE---------EeCCCCCCCCHHHHHHHHHHHh
Confidence 35789999999 89999988 56654321 0011112356788888887654
No 208
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.58 E-value=1e-07 Score=90.49 Aligned_cols=84 Identities=17% Similarity=0.205 Sum_probs=60.8
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEe--------------------------------
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVD-------------------------------- 111 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VD-------------------------------- 111 (513)
.++++|++|+++|||+|+++.|.++++.+. . -.+.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~-~-------v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~ 156 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL-G-------ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGN 156 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT-T-------EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC-C-------cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCC
Confidence 357889999999999999999999997652 1 012222221
Q ss_pred ------c--cchhcHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHH
Q 010286 112 ------C--ALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (513)
Q Consensus 112 ------c--~~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~ 172 (513)
| ..+++.++++++||+++||+++ .+|+ .+.|..+.++|.++|++
T Consensus 157 ~~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~----------------~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 157 LPKEVKTPNIVKKHYELGIQFGVRGTPSIVT-STGE----------------LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSCCCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC----------------CCCSCCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE----------------EecCCCCHHHHHHHHHh
Confidence 1 1135678899999999999987 4552 34677889999998875
No 209
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.56 E-value=9.3e-08 Score=86.65 Aligned_cols=46 Identities=9% Similarity=0.199 Sum_probs=38.6
Q ss_pred CCCeEEEEEecCCCH-HHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010286 64 PATYAVVEFFANWCP-ACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg-~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (513)
+++++||.||++||+ +|+...|.+.++.+.+.+.+ ..+.|+.|+++
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~----~~~~vv~is~d 78 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAEN----IDVRIISFSVD 78 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTT----CCCEEEEEESC
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcC----CcEEEEEEEeC
Confidence 468899999999999 99999999999999987432 14788888874
No 210
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.55 E-value=1e-07 Score=85.75 Aligned_cols=71 Identities=13% Similarity=0.175 Sum_probs=55.6
Q ss_pred CCCeEEEEEec-CCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------hhcHHHHHH
Q 010286 64 PATYAVVEFFA-NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------KINTNLCDK 123 (513)
Q Consensus 64 ~~~~vLV~FyA-~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------------------d~n~~lc~~ 123 (513)
.++++||.||+ +||++|+...|.+.++.+++++. .+.++.|.++. |.+.++++.
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~------~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA------GAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRA 107 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHH
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHH
Confidence 45789999998 99999999999999999999743 36677777642 234468888
Q ss_pred CCCCc------------cceEEEe-cCCcc
Q 010286 124 FSVGH------------YPMLLWG-SPSKF 140 (513)
Q Consensus 124 f~I~~------------~PTl~~f-~~g~~ 140 (513)
|++.. +|+++++ ++|++
T Consensus 108 ~~v~~~~~~~~~~~~~~~p~~~lid~~G~i 137 (163)
T 3gkn_A 108 FDVIKEKNMYGKQVLGIERSTFLLSPEGQV 137 (163)
T ss_dssp TTCEEEEEETTEEEEEECCEEEEECTTSCE
T ss_pred hCCccccccccccccCcceEEEEECCCCeE
Confidence 99987 8988887 45544
No 211
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.53 E-value=1.8e-07 Score=89.39 Aligned_cols=92 Identities=12% Similarity=0.167 Sum_probs=67.8
Q ss_pred cCCCCeEEEEEec-CCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch-------------------------
Q 010286 62 DTPATYAVVEFFA-NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK------------------------- 115 (513)
Q Consensus 62 ~~~~~~vLV~FyA-~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d------------------------- 115 (513)
+.+++++||.||+ +||++|+...|.+++++++|++. .+.|+.|+++..
T Consensus 66 ~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~ 139 (222)
T 3ztl_A 66 DYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR------NCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLA 139 (222)
T ss_dssp GGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEE
T ss_pred HhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEe
Confidence 3346899999997 99999999999999999999742 388888887531
Q ss_pred -hcHHHHHHCCCC------ccceEEEe-cCCcccCCCCCCccccchhhhccC----cCCHHHHHHHHHH
Q 010286 116 -INTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALED----WQTADGLLTWINK 172 (513)
Q Consensus 116 -~n~~lc~~f~I~------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g----~~~~e~L~~~i~~ 172 (513)
.+..+++.|+|. .+|+++++ ++|++.. .+.| ....+++++.|++
T Consensus 140 D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~-------------~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 140 DRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQ-------------ITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp CSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEEE-------------EEEECTTBCCCHHHHHHHHHH
T ss_pred CCchHHHHHcCCeecCCCCccceEEEECCCCeEEE-------------EEecCCCCCCCHHHHHHHHHH
Confidence 234688899998 89988887 4565432 1212 2456777777754
No 212
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.53 E-value=1.5e-07 Score=89.31 Aligned_cols=96 Identities=11% Similarity=0.150 Sum_probs=69.5
Q ss_pred CCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------------hh
Q 010286 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KI 116 (513)
Q Consensus 64 ~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--------------------------d~ 116 (513)
+++++||.|| ++||++|+...|.+.+++++|++. .+.|+.|+++. |.
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~ 124 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHER------NVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDI 124 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECT
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECC
Confidence 4588999999 999999999999999999999642 37888887642 11
Q ss_pred cHHHHHHCCCC-----ccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 117 NTNLCDKFSVG-----HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 117 n~~lc~~f~I~-----~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+.++++.|+|. .+|+++++ ++|++... .+......++.+++++.|++..
T Consensus 125 ~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~---------~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 125 TKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHL---------LVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp TSHHHHHTTCEETTTEECEEEEEECTTSBEEEE---------EEECTTCCCCHHHHHHHHHHHH
T ss_pred chHHHHHhCCccccCCcccEEEEECCCCEEEEE---------EecCCCCCCCHHHHHHHHHHHH
Confidence 45789999999 89988777 45544321 0000112357888888887654
No 213
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.49 E-value=2.3e-07 Score=83.77 Aligned_cols=89 Identities=9% Similarity=0.087 Sum_probs=63.9
Q ss_pred CCeEEEEEecCC-CHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------h-hcHHHHH
Q 010286 65 ATYAVVEFFANW-CPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------K-INTNLCD 122 (513)
Q Consensus 65 ~~~vLV~FyA~W-Cg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--------------------d-~n~~lc~ 122 (513)
++++||.||++| |++|+...|.++++++++. .+.++.|+.+. + .+.++.+
T Consensus 44 gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~--------~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 115 (167)
T 2jsy_A 44 GKVTIISVIPSIDTGVCDAQTRRFNEEAAKLG--------DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGE 115 (167)
T ss_dssp TSCEEEEECSCSTTSHHHHTHHHHHHHHHHHS--------SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHH
T ss_pred CCeEEEEEecCCCCCchHHHHHHHHHHHHHcC--------CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHH
Confidence 578999999999 9999999999999999982 26677776642 1 3457888
Q ss_pred HCCCCc------cceEEEe-cCCcccCCCCCCccccchhhhcc-----CcCCHHHHHHHHHHhc
Q 010286 123 KFSVGH------YPMLLWG-SPSKFVAGSWEPNQEKKEIRALE-----DWQTADGLLTWINKQT 174 (513)
Q Consensus 123 ~f~I~~------~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~-----g~~~~e~L~~~i~~~l 174 (513)
.|+|.. +|+++++ ++|++.. .+. ...+.+++++.|++.+
T Consensus 116 ~~~v~~~~~g~~~p~~~lid~~G~i~~-------------~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 116 AFGVYIKELRLLARSVFVLDENGKVVY-------------AEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp HTTCBBTTTCSBCCEEEEECTTSCEEE-------------EEECSBTTSCCCSHHHHHHHHHHH
T ss_pred HhCCccccCCceeeEEEEEcCCCcEEE-------------EEecCCcCCCCCHHHHHHHHHHhh
Confidence 999987 4877776 4554432 222 2235677888777653
No 214
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.47 E-value=1.1e-06 Score=84.10 Aligned_cols=111 Identities=19% Similarity=0.246 Sum_probs=86.4
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
.+.|.+++.+|+....... ...+++.|+.+||++|..+.+.|+++|+.++ +.+.|+.+|++.+.+..+++.|
T Consensus 112 ~plv~e~t~~n~~~~~~~~-~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k-------~~i~F~~vd~~~~~~~~~l~~f 183 (227)
T 4f9z_D 112 LHMVTEYNPVTVIGLFNSV-IQIHLLLIMNKASPEYEENMHRYQKAAKLFQ-------GKILFILVDSGMKENGKVISFF 183 (227)
T ss_dssp CCSEEECCHHHHHHHHHSS-CCEEEEEEECTTSTTHHHHHHHHHHHHHHTT-------TTCEEEEEETTSGGGHHHHHHT
T ss_pred CCceeecCcccHHHHhccC-CceEEEEEEcCCcchHHHHHHHHHHHHHHhh-------CCEEEEEeCCccHhHHHHHHHc
Confidence 3458899999999887653 2445667779999999999999999999997 4589999998655678899999
Q ss_pred CCC--ccceEEEecCCcccCCCCCCccccchhhhc-cCcCCHHHHHHHHHHhcc
Q 010286 125 SVG--HYPMLLWGSPSKFVAGSWEPNQEKKEIRAL-EDWQTADGLLTWINKQTS 175 (513)
Q Consensus 125 ~I~--~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~-~g~~~~e~L~~~i~~~l~ 175 (513)
|+. .+|++.++..... ....+ .+..+.+.|.+|+++.+.
T Consensus 184 gl~~~~~P~~~i~~~~~~------------~ky~~~~~~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 184 KLKESQLPALAIYQTLDD------------EWDTLPTAEVSVEHVQNFCDGFLS 225 (227)
T ss_dssp TCCGGGCSEEEEEESSSC------------CEEEETTCCCCHHHHHHHHHHHHT
T ss_pred CCCcccCCEEEEEECCCC------------ccccCCcCCCCHHHHHHHHHHHhC
Confidence 998 8999999864310 00111 356899999999988763
No 215
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.43 E-value=3.7e-07 Score=84.01 Aligned_cols=86 Identities=14% Similarity=0.137 Sum_probs=60.7
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-----------
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----------- 114 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----------- 114 (513)
.+..++++.+. +.+.+++++||.|| ++||++|+...|.++++.+++++. .+.++.|.++.
T Consensus 35 ~l~~~~G~~v~--l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~------~~~vv~Vs~D~~~~~~~~~~~~ 106 (179)
T 3ixr_A 35 PLMLSGSTCKT--LSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI------NATVLGVSRDSVKSHDSFCAKQ 106 (179)
T ss_dssp CEEEGGGEEEC--GGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT------TEEEEEEESCCHHHHHHHHHHH
T ss_pred eEECCCCCEEe--HHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC------CCEEEEEcCCCHHHHHHHHHHc
Confidence 34444554443 34445678999998 999999999999999999999753 37777777643
Q ss_pred --------hhcHHHHHHCCCCc------------cceEEEe-cCCcc
Q 010286 115 --------KINTNLCDKFSVGH------------YPMLLWG-SPSKF 140 (513)
Q Consensus 115 --------d~n~~lc~~f~I~~------------~PTl~~f-~~g~~ 140 (513)
|.+.++++.|+|.. .|+++++ ++|++
T Consensus 107 ~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I 153 (179)
T 3ixr_A 107 GFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRI 153 (179)
T ss_dssp TCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBE
T ss_pred CCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEE
Confidence 23446788888864 5767776 45544
No 216
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.42 E-value=8.5e-07 Score=84.40 Aligned_cols=58 Identities=12% Similarity=0.209 Sum_probs=44.4
Q ss_pred cceecC-cccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010286 47 HAVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (513)
Q Consensus 47 ~v~~L~-~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (513)
.+..++ ++.+. +.+.+++++||+|||+|||+|+ ..|.++++.++|++ ..+.|+.|+|+
T Consensus 39 ~l~d~~~G~~v~--Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~------~g~~Vlgvs~d 97 (215)
T 2i3y_A 39 EAIALNKNEYVS--FKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKP------YGLVVLGFPCN 97 (215)
T ss_dssp EEEBSSSSCEEE--GGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGG------GTEEEEEEECC
T ss_pred EeeeCCCCCEEc--HHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhcc------CCeEEEEEEcc
Confidence 344444 44333 3444578999999999999999 89999999999974 24889999874
No 217
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.42 E-value=5.8e-08 Score=87.52 Aligned_cols=98 Identities=11% Similarity=0.110 Sum_probs=56.5
Q ss_pred hcCCCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------hhcHHH
Q 010286 61 RDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------KINTNL 120 (513)
Q Consensus 61 ~~~~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------------------d~n~~l 120 (513)
.+.++++++|.|| ++||++|+...|.+.++.+++++. .+.++.|+.+. |.+.++
T Consensus 26 ~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~------~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v 99 (157)
T 4g2e_A 26 SALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV------NAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREV 99 (157)
T ss_dssp GGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGC------SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHH
T ss_pred HHHCCCeEEEEecCCCCCCccccchhhccccccccccc------CceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHH
Confidence 3344688999999 999999999999999999888653 36666776542 223456
Q ss_pred HHHCCCC-----------ccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHH
Q 010286 121 CDKFSVG-----------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (513)
Q Consensus 121 c~~f~I~-----------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~ 172 (513)
++.|||. ..|+++++ ++|++... .......+..+.+++++.|+.
T Consensus 100 ~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~--------~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 100 VKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYK--------WVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp HHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEE--------EEESSTTCCCCHHHHHHHHHH
T ss_pred HHHcCCccccccCCCcceeeeeEEEECCCCEEEEE--------EECCCCCCCCCHHHHHHHHHH
Confidence 7777763 34655554 45543210 000112344567888877754
No 218
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.39 E-value=4.2e-07 Score=81.50 Aligned_cols=68 Identities=6% Similarity=0.086 Sum_probs=51.6
Q ss_pred CeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------hhcHHHHHHCC
Q 010286 66 TYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------KINTNLCDKFS 125 (513)
Q Consensus 66 ~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------------------d~n~~lc~~f~ 125 (513)
+++||.|| ++||++|+...|.+.++.+++++. + .++.|+++. |.+.++++.|+
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~-----~--~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 108 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEY-----A--AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLG 108 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT-----C--EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHT
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhC-----C--cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhC
Confidence 47899987 999999999999999999999742 2 555565532 23456888999
Q ss_pred CCccc-------eEEEecCCccc
Q 010286 126 VGHYP-------MLLWGSPSKFV 141 (513)
Q Consensus 126 I~~~P-------Tl~~f~~g~~~ 141 (513)
|...| |+++ ++|++.
T Consensus 109 v~~~p~~g~~~~~~li-~~G~i~ 130 (159)
T 2a4v_A 109 AKKTPLSGSIRSHFIF-VDGKLK 130 (159)
T ss_dssp CBSSSSSCBCCEEEEE-ETTEEE
T ss_pred CcccccCCccceEEEE-cCCEEE
Confidence 99998 5555 777554
No 219
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.35 E-value=1.1e-06 Score=81.76 Aligned_cols=41 Identities=29% Similarity=0.515 Sum_probs=35.1
Q ss_pred CCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEec
Q 010286 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC 112 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc 112 (513)
++++||+||++|||+|+++.|.++++.+.+.+ .+.+..++.
T Consensus 25 ~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-------~v~~~~~~~ 65 (195)
T 3hd5_A 25 GKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-------DVVLKQVPI 65 (195)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-------TEEEEEEEC
T ss_pred CCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-------CeEEEEEec
Confidence 57899999999999999999999999998752 467777765
No 220
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.34 E-value=1.1e-06 Score=83.34 Aligned_cols=96 Identities=10% Similarity=0.108 Sum_probs=65.8
Q ss_pred CCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--------------------------h
Q 010286 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------I 116 (513)
Q Consensus 64 ~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--------------------------~ 116 (513)
+++++||.|| ++||++|+...|.+.++++++++. .+.++.|+++.. .
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~ 120 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI------NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDL 120 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECT
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECC
Confidence 4689999999 999999999999999999999742 377777776421 1
Q ss_pred cHHHHHHCCCC------ccceEEEec-CCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 117 NTNLCDKFSVG------HYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 117 n~~lc~~f~I~------~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+.++++.|+|. .+|+++++. +|++... .+......++.+++++.|+...
T Consensus 121 ~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~---------~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 121 THQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI---------TLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp TSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE---------EEECTTBCCCHHHHHHHHHHHH
T ss_pred chHHHHHcCCcccCCCcccceEEEECCCCEEEEE---------EecCCCCCCCHHHHHHHHHHhh
Confidence 23567778874 588877764 4543310 0001112357788888887654
No 221
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.32 E-value=8.6e-07 Score=81.07 Aligned_cols=69 Identities=10% Similarity=0.165 Sum_probs=52.6
Q ss_pred CCCeEEEEEecCC-CHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--------------------hcHHHHH
Q 010286 64 PATYAVVEFFANW-CPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------INTNLCD 122 (513)
Q Consensus 64 ~~~~vLV~FyA~W-Cg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--------------------~n~~lc~ 122 (513)
+++++||.||++| |++|+...|.+++++++ . .+.|+.|+.+.. .+.++++
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~--------~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 113 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-S--------GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGE 113 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T--------TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c--------CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHH
Confidence 4578999999999 99999999999999987 3 266777776421 1356889
Q ss_pred HCCCCcc---------ceEEEe-cCCccc
Q 010286 123 KFSVGHY---------PMLLWG-SPSKFV 141 (513)
Q Consensus 123 ~f~I~~~---------PTl~~f-~~g~~~ 141 (513)
.|+|... |+++++ ++|++.
T Consensus 114 ~~gv~~~~~~~~g~~~p~~~lid~~G~I~ 142 (175)
T 1xvq_A 114 DYGVTIADGPMAGLLARAIVVIGADGNVA 142 (175)
T ss_dssp HTTCBBCSSTTTTSBCSEEEEECTTSBEE
T ss_pred HhCCcccccccCCcccceEEEECCCCeEE
Confidence 9999887 776665 466543
No 222
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.32 E-value=1.1e-06 Score=85.01 Aligned_cols=87 Identities=17% Similarity=0.270 Sum_probs=62.3
Q ss_pred CCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEec--------------------------------
Q 010286 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC-------------------------------- 112 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc-------------------------------- 112 (513)
++.+|++|+.+|||+|+++.|.++++.+. ++|.+..++.
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---------g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~ 167 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS---------GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGG 167 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT---------TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTT
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC---------CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhc
Confidence 46689999999999999999999887653 1255543332
Q ss_pred ----------------cchhcHHHHHHCCCCccceEEEec-CCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 113 ----------------ALKINTNLCDKFSVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 113 ----------------~~d~n~~lc~~f~I~~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
..+.+.++++++||+++||+++.. +|+ +..+.|..+.+.|.++|++..
T Consensus 168 ~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~--------------~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 168 KLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENT--------------LQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTE--------------EEEEESSCCHHHHHHHTTC--
T ss_pred cCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC--------------EEEecCCCCHHHHHHHHHHHH
Confidence 112456788999999999999864 232 124568889999998887654
No 223
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.31 E-value=1.3e-06 Score=81.08 Aligned_cols=31 Identities=26% Similarity=0.502 Sum_probs=28.7
Q ss_pred CCeEEEEEecCCCHHHhhhhHHHHHHHHHhC
Q 010286 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFN 95 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~ 95 (513)
++++||+|+++|||+|+++.|.++++.+.+.
T Consensus 25 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~ 55 (192)
T 3h93_A 25 GKIEVVELFWYGCPHCYAFEPTIVPWSEKLP 55 (192)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHhCC
Confidence 5789999999999999999999999998875
No 224
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.30 E-value=1.6e-06 Score=78.91 Aligned_cols=96 Identities=9% Similarity=0.007 Sum_probs=64.6
Q ss_pred CCCeEEEEEecCCCH-HHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc----------------------------
Q 010286 64 PATYAVVEFFANWCP-ACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------------------------- 114 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg-~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---------------------------- 114 (513)
+++++||.||++||+ .|....|.++++.+++.+.+ ..+.++.|.++.
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~----~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~ 102 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPG----KDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKT 102 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBT----TTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESS
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcC----CceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCC
Confidence 368899999999997 69999999999999996422 236666666531
Q ss_pred -hhcHHHHHHCCC---------CccceEEEe-cCCcccCCCCCCccccchhhhccC-cCCHHHHHHHHHHhccc
Q 010286 115 -KINTNLCDKFSV---------GHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALED-WQTADGLLTWINKQTSR 176 (513)
Q Consensus 115 -d~n~~lc~~f~I---------~~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g-~~~~e~L~~~i~~~l~~ 176 (513)
+...++++.||+ ...|+++++ ++|++. ..+.| ..+.++|.+.|.+....
T Consensus 103 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~-------------~~~~g~~~~~~~i~~~l~~~~~~ 163 (170)
T 3me7_A 103 SEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIK-------------DYIYGVNYNYLEFVNALRLARGE 163 (170)
T ss_dssp HHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEE-------------EEEESSSCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEE-------------EEEeCCCCCHHHHHHHHHHhhcc
Confidence 122456666554 344655555 344332 23444 36789999999887754
No 225
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.29 E-value=1.1e-06 Score=84.03 Aligned_cols=96 Identities=14% Similarity=0.173 Sum_probs=65.3
Q ss_pred CCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--------------------------h
Q 010286 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------I 116 (513)
Q Consensus 64 ~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--------------------------~ 116 (513)
+++++||.|| ++||++|+...|.+.+++++|++. .+.|+.|+++.. .
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~ 128 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK------NVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDI 128 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECT
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECC
Confidence 4689999999 999999999999999999998642 377777776421 1
Q ss_pred cHHHHHHCCC-----CccceEEEec-CCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 117 NTNLCDKFSV-----GHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 117 n~~lc~~f~I-----~~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+.++++.|+| ..+|+++++. +|++... .+.......+.+++++.|++..
T Consensus 129 ~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~---------~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 129 NKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQ---------TVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp TSHHHHHTTCEETTTEECEEEEEECTTSBEEEE---------EEECTTCCCCHHHHHHHHHHHH
T ss_pred chHHHHHcCCcccCCCccceEEEECCCCeEEEE---------EecCCCCCCCHHHHHHHHHHHh
Confidence 2356777887 3678877764 4543321 0000112357788888887654
No 226
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.25 E-value=2.6e-06 Score=80.55 Aligned_cols=46 Identities=7% Similarity=0.091 Sum_probs=38.6
Q ss_pred hcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010286 61 RDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (513)
Q Consensus 61 ~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (513)
.+.+++++||+|||+|||+| ...|.+.++.++|++. .+.|+.|+|+
T Consensus 34 s~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~------g~~vlgvs~d 79 (207)
T 2r37_A 34 KQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPF------GLVILGFPCN 79 (207)
T ss_dssp GGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred HHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC------CEEEEEEECc
Confidence 34456899999999999999 6899999999999742 4889999874
No 227
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.25 E-value=2.6e-06 Score=82.39 Aligned_cols=98 Identities=11% Similarity=0.128 Sum_probs=68.2
Q ss_pred hcCCCCeEEEEEec-CCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch------------------------
Q 010286 61 RDTPATYAVVEFFA-NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK------------------------ 115 (513)
Q Consensus 61 ~~~~~~~vLV~FyA-~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d------------------------ 115 (513)
.+.+++++||.||+ +||++|+...|.+.+++++|++. .+.++.|.++..
T Consensus 73 sd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~------gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l 146 (240)
T 3qpm_A 73 SDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI------NTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLL 146 (240)
T ss_dssp GGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT------TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEE
T ss_pred HHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEE
Confidence 33346899999999 99999999999999999999753 377888876531
Q ss_pred --hcHHHHHHCCCC------ccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHh
Q 010286 116 --INTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (513)
Q Consensus 116 --~n~~lc~~f~I~------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~ 173 (513)
.+.++++.|+|. .+|+++++ ++|++... .+......++.+++++.|+..
T Consensus 147 ~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~---------~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 147 SDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQI---------TMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp ECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE---------EEECTTBCCCHHHHHHHHHHH
T ss_pred eCchHHHHHHhCCccccCCCccceEEEEcCCCeEEEE---------EecCCCCCCCHHHHHHHHHHh
Confidence 124678889987 68988777 45544321 000111245678888877653
No 228
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.22 E-value=1.3e-07 Score=85.87 Aligned_cols=97 Identities=12% Similarity=0.085 Sum_probs=64.2
Q ss_pred CCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------hhcHHHHHHC
Q 010286 65 ATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------KINTNLCDKF 124 (513)
Q Consensus 65 ~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------------------d~n~~lc~~f 124 (513)
++++++.|| ++||++|+...|.+.++.+++++. .+.++.|+.+. |.+.++++.|
T Consensus 33 Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~------~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~y 106 (164)
T 4gqc_A 33 GRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA------NAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLY 106 (164)
T ss_dssp SSCEEEEECSCTTCCEECSSCEESCCCGGGGGGS------SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHT
T ss_pred CCEEEEEEeCCCCCCCcccchhhhhhhHHHhhcc------CceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHc
Confidence 477889998 999999999999999999988753 36677776542 2345677888
Q ss_pred CCC----------ccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 125 SVG----------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 125 ~I~----------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
||. ..|+++++ ++|++... .......+..+.+++++.+++..+
T Consensus 107 gv~~~~~~~~~~~~~p~tflID~~G~I~~~--------~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 107 NVYHEDLKGLKMVAKRAVFIVKPDGTVAYK--------WVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp TCEEEEETTEEEEECCEEEEECTTSBEEEE--------EECSCTTCCCCHHHHHHHHHHHHH
T ss_pred CCcccccccCcCCeeeEEEEECCCCEEEEE--------EEeCCCCCCCCHHHHHHHHHHHhc
Confidence 874 35766655 45544310 000112234577888888877654
No 229
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.19 E-value=1.9e-06 Score=83.76 Aligned_cols=95 Identities=7% Similarity=0.064 Sum_probs=68.0
Q ss_pred CCe-EEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-------------------------hhcH
Q 010286 65 ATY-AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------------KINT 118 (513)
Q Consensus 65 ~~~-vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------------------------d~n~ 118 (513)
+++ +|+.|+++||++|....|.+.+++++|++. ++.++.|+++. |.+.
T Consensus 33 GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~------gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~ 106 (249)
T 3a2v_A 33 GKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL------GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQG 106 (249)
T ss_dssp TCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTS
T ss_pred CCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC------CcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCch
Confidence 365 466889999999999999999999999742 48888888753 1245
Q ss_pred HHHHHCCCC-------ccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 119 NLCDKFSVG-------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 119 ~lc~~f~I~-------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
++++.|+|. .+|+++++ ++|++... .+....-+++.++|...|+...
T Consensus 107 ~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~---------~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 107 TVARRLGLLHAESATHTVRGVFIVDARGVIRTM---------LYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEE---------EEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHhCCccccCCCcccceEEEECCCCeEEEE---------EecCCcccchhHHHHHHHHHHH
Confidence 689999997 89988877 45544321 0011112368899998887654
No 230
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.19 E-value=2.7e-06 Score=78.70 Aligned_cols=91 Identities=10% Similarity=-0.016 Sum_probs=62.9
Q ss_pred CCeEEEEEec-CCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch-----------------------hcHHH
Q 010286 65 ATYAVVEFFA-NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK-----------------------INTNL 120 (513)
Q Consensus 65 ~~~vLV~FyA-~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d-----------------------~n~~l 120 (513)
++++||.||+ +||++|+...|.+.++++++++. .+.++.|.++.. .+.++
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~ 103 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKL------GVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGAL 103 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT------TEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHH
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHH
Confidence 5789999995 99999999999999999998642 377777776421 12346
Q ss_pred HHHCCCC------ccceEEEec-CCcccCCCCCCccccchhhhccC----cCCHHHHHHHHHHhc
Q 010286 121 CDKFSVG------HYPMLLWGS-PSKFVAGSWEPNQEKKEIRALED----WQTADGLLTWINKQT 174 (513)
Q Consensus 121 c~~f~I~------~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~g----~~~~e~L~~~i~~~l 174 (513)
++.|+|. ..|+++++. +|++. ..+.| .++.+++.+.|++..
T Consensus 104 ~~~ygv~~~~~g~~~p~~~lID~~G~i~-------------~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 104 TRNFDNMREDEGLADRATFVVDPQGIIQ-------------AIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEE-------------EEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHhCCccCCCCceeeEEEEECCCCeEE-------------EEEecCCCCCCCHHHHHHHHHHHH
Confidence 6677776 358777764 45433 12222 246788888887654
No 231
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.18 E-value=2.5e-06 Score=76.90 Aligned_cols=44 Identities=9% Similarity=0.064 Sum_probs=35.5
Q ss_pred cCCCCeEEEEEec-CCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010286 62 DTPATYAVVEFFA-NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (513)
Q Consensus 62 ~~~~~~vLV~FyA-~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (513)
+.+++++||.||+ +||++|+...|.++++++++ . .+.++.|+++
T Consensus 39 ~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~-------~v~vv~is~d 83 (163)
T 1psq_A 39 DFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D-------NTVVLTVSMD 83 (163)
T ss_dssp GGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-------TEEEEEEESS
T ss_pred HhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C-------CcEEEEEECC
Confidence 3346889999995 99999999999999998877 1 2777777764
No 232
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.18 E-value=3.4e-06 Score=81.21 Aligned_cols=71 Identities=13% Similarity=0.179 Sum_probs=51.2
Q ss_pred CCeEEEEEe-cCCCHHHh-hhhHHHHHHHHHhCCCCCCCCCeE-EEEEEeccc--------------------hhcHHHH
Q 010286 65 ATYAVVEFF-ANWCPACR-NYKPQYEKVARLFNGPNAAHPGII-LMTRVDCAL--------------------KINTNLC 121 (513)
Q Consensus 65 ~~~vLV~Fy-A~WCg~Ck-~~~P~~~~lA~~~~~~~~~~~~~v-~~~~VDc~~--------------------d~n~~lc 121 (513)
++++||.|| ++||++|+ ...|.+.++++++++. .+ .++.|+.+. |.+.+++
T Consensus 33 gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~------~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 106 (241)
T 1nm3_A 33 NKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY------GVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFT 106 (241)
T ss_dssp TSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT------TCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHH
T ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC------CCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHH
Confidence 478999999 99999999 9999999999998642 36 677776542 2234567
Q ss_pred HHCCCC-----------ccceEEEecCCccc
Q 010286 122 DKFSVG-----------HYPMLLWGSPSKFV 141 (513)
Q Consensus 122 ~~f~I~-----------~~PTl~~f~~g~~~ 141 (513)
+.||+. ..|+.+++++|++.
T Consensus 107 ~~~gv~~~~~~~g~~~~~~p~t~li~~G~i~ 137 (241)
T 1nm3_A 107 EGMGMLVGKEDLGFGKRSWRYSMLVKNGVVE 137 (241)
T ss_dssp HHTTCEEECTTTTCCEEECCEEEEEETTEEE
T ss_pred HHhCceeecccccCcccceeEEEEEECCEEE
Confidence 777775 34655555666543
No 233
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.16 E-value=8.6e-07 Score=73.79 Aligned_cols=70 Identities=16% Similarity=0.214 Sum_probs=47.1
Q ss_pred cHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh-----cHHHHHHCCCCcc
Q 010286 55 NFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-----NTNLCDKFSVGHY 129 (513)
Q Consensus 55 ~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-----n~~lc~~f~I~~~ 129 (513)
.+++.+... .++.|+++|||+|+++.|.+++++..+. . +..+|++.+. ...+.+.+++.++
T Consensus 4 ~~~~~i~~~----~v~~f~~~~C~~C~~~~~~L~~~~~~~~--------~--~~~vdi~~~~~~~~~~~~l~~~~g~~~v 69 (105)
T 1kte_A 4 FVNSKIQPG----KVVVFIKPTCPFCRKTQELLSQLPFKEG--------L--LEFVDITATSDTNEIQDYLQQLTGARTV 69 (105)
T ss_dssp HHHHHCCTT----CEEEEECSSCHHHHHHHHHHHHSCBCTT--------S--EEEEEGGGSTTHHHHHHHHHHHHSCCCS
T ss_pred HHHhhcccC----CEEEEEcCCCHhHHHHHHHHHHcCCCCC--------c--cEEEEccCCCCHHHHHHHHHHHhCCCCc
Confidence 455566442 2677999999999999999987644321 1 4445654321 1357888999999
Q ss_pred ceEEEecCCcc
Q 010286 130 PMLLWGSPSKF 140 (513)
Q Consensus 130 PTl~~f~~g~~ 140 (513)
||+++ +|+.
T Consensus 70 P~i~~--~g~~ 78 (105)
T 1kte_A 70 PRVFI--GKEC 78 (105)
T ss_dssp CEEEE--TTEE
T ss_pred CeEEE--CCEE
Confidence 99843 4543
No 234
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.15 E-value=2.6e-06 Score=77.64 Aligned_cols=43 Identities=14% Similarity=0.236 Sum_probs=34.9
Q ss_pred CCeEEEEEe-cCCCHHHhh-hhHHHHHHHHHhCCCCCCCCCeE-EEEEEecc
Q 010286 65 ATYAVVEFF-ANWCPACRN-YKPQYEKVARLFNGPNAAHPGII-LMTRVDCA 113 (513)
Q Consensus 65 ~~~vLV~Fy-A~WCg~Ck~-~~P~~~~lA~~~~~~~~~~~~~v-~~~~VDc~ 113 (513)
++++||.|| ++||++|+. ..|.+.++++++++. .+ .++.|+.+
T Consensus 31 Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~------gv~~vv~Is~d 76 (167)
T 2wfc_A 31 GKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGK------GVDIIACMAVN 76 (167)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHT------TCCEEEEEESS
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC------CCCEEEEEeCC
Confidence 467888887 999999999 999999999998642 36 67777653
No 235
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.14 E-value=9.2e-06 Score=75.65 Aligned_cols=41 Identities=27% Similarity=0.607 Sum_probs=33.4
Q ss_pred CCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEec
Q 010286 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC 112 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc 112 (513)
++++||+||++|||||+++.|.++++.+.+.+ .+.|..++.
T Consensus 24 ~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-------~v~~~~~p~ 64 (193)
T 3hz8_A 24 GKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-------DMYLRTEHV 64 (193)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-------TEEEEEEEC
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-------CeEEEEecC
Confidence 57899999999999999999999999887652 355655543
No 236
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.11 E-value=1.9e-06 Score=67.93 Aligned_cols=52 Identities=12% Similarity=0.197 Sum_probs=37.9
Q ss_pred EEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh-cHHHHHHCCCCccceEE
Q 010286 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-NTNLCDKFSVGHYPMLL 133 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-n~~lc~~f~I~~~PTl~ 133 (513)
++.|+++|||+|++..+.++++ . +.+..+|++.+. ..+..+++++.++||++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~----~---------i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~ 55 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR----G---------FDFEMINVDRVPEAAEALRAQGFRQLPVVI 55 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT----T---------CCCEEEETTTCHHHHHHHHHTTCCSSCEEE
T ss_pred EEEEcCCCChhHHHHHHHHHHC----C---------CCeEEEECCCCHHHHHHHHHhCCCccCEEE
Confidence 6789999999999999988863 1 456678875321 12233469999999994
No 237
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.11 E-value=2.4e-06 Score=77.25 Aligned_cols=106 Identities=10% Similarity=0.121 Sum_probs=62.5
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------------
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------ 114 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------ 114 (513)
+..++.+.+. +.+.++++++|.|| +.||++|+...|.+++++++ . .+.++.|+.+.
T Consensus 31 l~~~~G~~~~--l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~--------~~~vv~is~d~~~~~~~~~~~~~ 99 (166)
T 3p7x_A 31 VLDNDLNQVT--LADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E--------EGIVLTISADLPFAQKRWCASAG 99 (166)
T ss_dssp EECTTSCEEE--GGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T--------TSEEEEEESSCHHHHHHHHHHHT
T ss_pred EEcCCCCEEe--HHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C--------CCEEEEEECCCHHHHHHHHHHcC
Confidence 3444444333 33334678999999 78999999999999988765 2 25666666542
Q ss_pred --------hh-cHHHHHHCCCCc------cceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHH
Q 010286 115 --------KI-NTNLCDKFSVGH------YPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (513)
Q Consensus 115 --------d~-n~~lc~~f~I~~------~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~ 172 (513)
|. +.++++.|+|.. .|+++++ ++|++... .......+..+.+++++.|++
T Consensus 100 ~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~--------~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 100 LDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYK--------EIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp CSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEE--------EECSBTTSCCCHHHHHHHHHT
T ss_pred CCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEE--------EEcCCcccCCCHHHHHHHHhc
Confidence 12 345666677664 6776666 34543321 000012234566777776643
No 238
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.10 E-value=6.1e-06 Score=78.77 Aligned_cols=100 Identities=14% Similarity=0.135 Sum_probs=77.1
Q ss_pred Ccceec-CcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 46 DHAVEL-NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 46 ~~v~~L-~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
..++.| +.+++++.+... ..+||.||++| |....|+|.++|+.+. .+.|+... +.++|.+|
T Consensus 9 ~~~~~l~s~~~~~~~l~~~--~v~vVgff~~~---~~~~~~~f~~~A~~l~--------~~~F~~t~-----~~~v~~~~ 70 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIAAT--EVAVIGFFQDL---EIPAVPILHSMVQKFP--------GVSFGIST-----DSEVLTHY 70 (227)
T ss_dssp CCCEECCSHHHHHHHHHTS--SEEEEEECSCS---CSTHHHHHHHHTTTCT--------TSEEEEEC-----CHHHHHHT
T ss_pred CCCeeeCCHHHHHHHHhcC--CeEEEEEecCC---CchhHHHHHHHHHhCC--------CceEEEEC-----CHHHHHHc
Confidence 335555 569999988763 67899999998 5789999999999883 26777754 57899999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhcc----CcCCHHHHHHHHHHhccc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE----DWQTADGLLTWINKQTSR 176 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~----g~~~~e~L~~~i~~~l~~ 176 (513)
+|++ ||+++|+++. +....|. |.++.++|.+||.++..+
T Consensus 71 ~v~~-p~i~lfk~~~------------~~~~~~~~~~~g~~~~~~l~~fi~~~~~p 113 (227)
T 4f9z_D 71 NITG-NTICLFRLVD------------NEQLNLEDEDIESIDATKLSRFIEINSLH 113 (227)
T ss_dssp TCCS-SEEEEEETTT------------TEEEEECHHHHHTCCHHHHHHHHHHHCCC
T ss_pred CCCC-CeEEEEEecC------------cccccccccccCCCCHHHHHHHHHHhCCC
Confidence 9998 9999998631 1112344 579999999999988644
No 239
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.08 E-value=1.9e-05 Score=68.34 Aligned_cols=97 Identities=14% Similarity=0.143 Sum_probs=75.3
Q ss_pred Ccceec-CcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 46 DHAVEL-NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 46 ~~v~~L-~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
..+..| +.++++..+.. +..++|-|+++||++| .+.|.++|+.+. .+.|+.++ +.++..+|
T Consensus 21 ~~~~~i~s~~e~e~fi~~--~~v~VVGfF~~~~~~~---~~~F~~~A~~~~--------d~~F~~t~-----~~~v~~~~ 82 (124)
T 2l4c_A 21 QEPTWLTDVPAAMEFIAA--TEVAVIGFFQDLEIPA---VPILHSMVQKFP--------GVSFGIST-----DSEVLTHY 82 (124)
T ss_dssp CCCEECCSHHHHHHHHHT--SSEEEEEECSCTTSTH---HHHHHHHHHHCT--------TSEEEEEC-----CHHHHHHT
T ss_pred CcceEcCCHHHHHHHHhc--CCCEEEEEECCCCChh---HHHHHHHHHhCC--------CceEEEEC-----hHHHHHHc
Confidence 334445 45788888865 3678999999999999 778999999983 37888887 47799999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccC----cCCHHHHHHHHHHh
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED----WQTADGLLTWINKQ 173 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g----~~~~e~L~~~i~~~ 173 (513)
++. .|++.+|++.. +....|.| ..+.+.|.+||..+
T Consensus 83 ~v~-~~~vvlfkkfd------------e~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 83 NIT-GNTICLFRLVD------------NEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp TCC-SSCEEEEETTT------------TEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred CCC-CCeEEEEEcCC------------CCceeecCcccCCCCHHHHHHHHHHh
Confidence 999 89999998642 11234555 67999999999865
No 240
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.08 E-value=3.4e-07 Score=85.99 Aligned_cols=42 Identities=24% Similarity=0.537 Sum_probs=36.7
Q ss_pred CCeEEEEEecCCCHHHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEecc
Q 010286 65 ATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCA 113 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (513)
++++||+||+.|||||+++.|.| +++++.+. +.|.|..++.+
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~-------~~v~~~~~~v~ 157 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLP-------EGVKMTKYHVN 157 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSC-------TTCCEEEEECS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCC-------CCCEEEEeccC
Confidence 46789999999999999999999 99888875 35889999975
No 241
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.06 E-value=9.8e-06 Score=62.56 Aligned_cols=51 Identities=12% Similarity=0.242 Sum_probs=38.7
Q ss_pred EEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHH---HHCCCCccceEEE
Q 010286 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC---DKFSVGHYPMLLW 134 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc---~~f~I~~~PTl~~ 134 (513)
++.|+++||++|++..+.++++ . +.+..+|++ .+.++. +++++.++|++++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~----~---------i~~~~~di~--~~~~~~~~~~~~~~~~vP~l~~ 56 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA----G---------LAYNTVDIS--LDDEARDYVMALGYVQAPVVEV 56 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT----T---------CCCEEEETT--TCHHHHHHHHHTTCBCCCEEEE
T ss_pred EEEEeCCCChHHHHHHHHHHHc----C---------CCcEEEECC--CCHHHHHHHHHcCCCccCEEEE
Confidence 6789999999999999988864 1 445667764 334443 3899999999974
No 242
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.05 E-value=5.3e-06 Score=80.95 Aligned_cols=97 Identities=11% Similarity=0.125 Sum_probs=65.7
Q ss_pred hcCCCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch------------------------
Q 010286 61 RDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK------------------------ 115 (513)
Q Consensus 61 ~~~~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d------------------------ 115 (513)
.+.+++++||.|| ++||++|....|.+.+++++|++. .+.|+.|.++..
T Consensus 87 sd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~------gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l 160 (254)
T 3tjj_A 87 TDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI------NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLL 160 (254)
T ss_dssp GGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEE
T ss_pred HHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc------CCEEEEEcCCCHHHHHHHHHHHHHhcCCccccccee
Confidence 3345688999999 999999999999999999999753 377888876531
Q ss_pred --hcHHHHHHCCCC------ccceEEEec-CCcccCCCCCCccccchhhhccCcCCHHHHHHHHHH
Q 010286 116 --INTNLCDKFSVG------HYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (513)
Q Consensus 116 --~n~~lc~~f~I~------~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~ 172 (513)
.+.++++.|+|. .+|+++++. +|++... .+....-.++.++++..|+.
T Consensus 161 ~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~---------~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 161 SDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI---------TLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp ECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEE---------EEECTTCCCCHHHHHHHHHH
T ss_pred eCcHHHHHHHcCCccccCCCccceEEEECCCCeEEEE---------EecCCCCCCCHHHHHHHHHh
Confidence 134577778875 578777764 5543310 00011224667788777764
No 243
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.05 E-value=5.2e-06 Score=74.86 Aligned_cols=42 Identities=10% Similarity=0.229 Sum_probs=34.2
Q ss_pred CCeEEEEEe-cCCCHHHh-hhhHHHHHHHHHhCCCCCCCCCeEE-EEEEec
Q 010286 65 ATYAVVEFF-ANWCPACR-NYKPQYEKVARLFNGPNAAHPGIIL-MTRVDC 112 (513)
Q Consensus 65 ~~~vLV~Fy-A~WCg~Ck-~~~P~~~~lA~~~~~~~~~~~~~v~-~~~VDc 112 (513)
++++||.|| ++||++|+ ...|.+.++++++++.+ +. ++.|+.
T Consensus 35 gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~------v~~vv~Is~ 79 (162)
T 1tp9_A 35 GKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKG------VTEILCISV 79 (162)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT------CCCEEEEES
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC------CCEEEEEEC
Confidence 478999999 89999999 99999999999986432 45 555654
No 244
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.03 E-value=1.1e-05 Score=74.60 Aligned_cols=32 Identities=25% Similarity=0.676 Sum_probs=28.9
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhC
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFN 95 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~ 95 (513)
+++++|++||.+|||+|+.+.|.+.++.+.+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~ 52 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALP 52 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCC
Confidence 35778999999999999999999999998875
No 245
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.03 E-value=5.2e-06 Score=75.31 Aligned_cols=62 Identities=13% Similarity=0.244 Sum_probs=44.1
Q ss_pred hcCCCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch-hcHHHHHHCCCCccc
Q 010286 61 RDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK-INTNLCDKFSVGHYP 130 (513)
Q Consensus 61 ~~~~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d-~n~~lc~~f~I~~~P 130 (513)
.+.+++++||.|| ++||++|+...|.+.++.+++ . .+.++.|.++.. ...+.++++++..+|
T Consensus 43 ~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~-------~v~vv~Is~d~~~~~~~~~~~~~~~~~~ 106 (171)
T 2yzh_A 43 GGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM-E-------GVDVTVVSMDLPFAQKRFCESFNIQNVT 106 (171)
T ss_dssp SSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-------TEEEEEEESSCHHHHHHHHHHTTCCSSE
T ss_pred HHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C-------CceEEEEeCCCHHHHHHHHHHcCCCCeE
Confidence 3445688999999 899999999999999998877 2 377777776432 123445566664344
No 246
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.02 E-value=6.9e-06 Score=76.11 Aligned_cols=43 Identities=12% Similarity=0.173 Sum_probs=32.6
Q ss_pred CCeE-EEEEecCCCHHHhh-hhHHHHHHHHHhCCCCCCCCCeEE-EEEEecc
Q 010286 65 ATYA-VVEFFANWCPACRN-YKPQYEKVARLFNGPNAAHPGIIL-MTRVDCA 113 (513)
Q Consensus 65 ~~~v-LV~FyA~WCg~Ck~-~~P~~~~lA~~~~~~~~~~~~~v~-~~~VDc~ 113 (513)
++++ |+.|+++||++|+. ..|.+.++++++++.+ +. ++.|+.+
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g------v~~vv~Is~d 101 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARG------VDDIAVVAVN 101 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTT------CCEEEEEESS
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcC------CCEEEEEECC
Confidence 3544 45556999999999 7999999999997532 55 6777654
No 247
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.01 E-value=3e-06 Score=71.97 Aligned_cols=61 Identities=20% Similarity=0.163 Sum_probs=43.3
Q ss_pred EEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh-----cHHHHHHCCCCccceEEEecCCcc
Q 010286 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-----NTNLCDKFSVGHYPMLLWGSPSKF 140 (513)
Q Consensus 68 vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-----n~~lc~~f~I~~~PTl~~f~~g~~ 140 (513)
.++.|+++|||+|++..+.+++++... +. +..+|++.+. ..++.+.+++.++|++++ +|+.
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~--------~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~~ 85 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKR--------GA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKTS 85 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCT--------TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTEE
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCc--------Cc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCEE
Confidence 478899999999999999887643211 11 6667775332 147888999999999854 4543
No 248
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.00 E-value=5.9e-06 Score=75.77 Aligned_cols=33 Identities=15% Similarity=0.283 Sum_probs=27.2
Q ss_pred CCeEEEEEe-cCCCHHHh-hhhHHHHHHHHHhCCC
Q 010286 65 ATYAVVEFF-ANWCPACR-NYKPQYEKVARLFNGP 97 (513)
Q Consensus 65 ~~~vLV~Fy-A~WCg~Ck-~~~P~~~~lA~~~~~~ 97 (513)
+++++|.|| ++||++|+ ...|.+.+++++|++.
T Consensus 43 gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~ 77 (173)
T 3mng_A 43 GKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAK 77 (173)
T ss_dssp TSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT
T ss_pred CCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 466666655 99999999 5999999999999753
No 249
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=97.99 E-value=8.9e-06 Score=76.23 Aligned_cols=84 Identities=10% Similarity=0.182 Sum_probs=57.2
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------------
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------ 114 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------ 114 (513)
+..++.+.+. +.+.+++++||.|| +.||++|+...|.++++++++. .+.++.|.++.
T Consensus 63 l~d~~G~~v~--L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~~--------~v~vv~Is~D~~~~~~~~~~~~~ 132 (200)
T 3zrd_A 63 LVAKDLSDVA--LSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGELE--------NTVVLCISSDLPFAQSRFCGAEG 132 (200)
T ss_dssp EECTTSCEEE--GGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTST--------TEEEEEEESSCHHHHTTCTTTTT
T ss_pred EECCCCCEEc--HHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHhC--------CCEEEEEECCCHHHHHHHHHHcC
Confidence 3334444333 34445688999999 7899999999999999999882 27777776642
Q ss_pred --------hh-cHHHHHHCCCC---------ccceEEEe-cCCccc
Q 010286 115 --------KI-NTNLCDKFSVG---------HYPMLLWG-SPSKFV 141 (513)
Q Consensus 115 --------d~-n~~lc~~f~I~---------~~PTl~~f-~~g~~~ 141 (513)
|. +.++++.|+|. ..|+++++ ++|++.
T Consensus 133 ~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~ 178 (200)
T 3zrd_A 133 LSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVI 178 (200)
T ss_dssp CTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEE
T ss_pred CCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEE
Confidence 22 45677777775 25877776 455443
No 250
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.96 E-value=8.4e-06 Score=73.56 Aligned_cols=44 Identities=11% Similarity=0.194 Sum_probs=35.6
Q ss_pred cCCCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010286 62 DTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (513)
Q Consensus 62 ~~~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (513)
+.+++++||.|| ++||++|+...|.++++.+++. .+.++.|+.+
T Consensus 40 ~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~--------~v~vv~Is~d 84 (165)
T 1q98_A 40 DFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKLS--------NTIVLCISAD 84 (165)
T ss_dssp GGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHST--------TEEEEEEESS
T ss_pred HhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHcC--------CCEEEEEeCC
Confidence 334688999999 8999999999999999999882 2667777653
No 251
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.92 E-value=2.9e-06 Score=74.00 Aligned_cols=69 Identities=17% Similarity=0.261 Sum_probs=47.1
Q ss_pred cccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh-cH----HHHHHCCCC
Q 010286 53 ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-NT----NLCDKFSVG 127 (513)
Q Consensus 53 ~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-n~----~lc~~f~I~ 127 (513)
.+.+++.+... . ++.|+++|||+|+++.+.++++. +.+..+|++.+. +. ++.+.+++.
T Consensus 17 ~~~~~~~i~~~---~-vvvf~~~~Cp~C~~~~~~L~~~~-------------i~~~~vdid~~~~~~~~~~~l~~~~g~~ 79 (130)
T 2cq9_A 17 VNQIQETISDN---C-VVIFSKTSCSYCTMAKKLFHDMN-------------VNYKVVELDLLEYGNQFQDALYKMTGER 79 (130)
T ss_dssp HHHHHHHHHHS---S-EEEEECSSCSHHHHHHHHHHHHT-------------CCCEEEETTTSTTHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHcCC---c-EEEEEcCCChHHHHHHHHHHHcC-------------CCcEEEECcCCcCcHHHHHHHHHHhCCC
Confidence 45566677653 2 44599999999999999998763 223456654321 12 478899999
Q ss_pred ccceEEEecCCcc
Q 010286 128 HYPMLLWGSPSKF 140 (513)
Q Consensus 128 ~~PTl~~f~~g~~ 140 (513)
++||+++ +|+.
T Consensus 80 ~vP~l~i--~G~~ 90 (130)
T 2cq9_A 80 TVPRIFV--NGTF 90 (130)
T ss_dssp CSSEEEE--TTEE
T ss_pred CcCEEEE--CCEE
Confidence 9999853 4543
No 252
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.91 E-value=3.8e-05 Score=69.74 Aligned_cols=31 Identities=26% Similarity=0.503 Sum_probs=27.8
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHh
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLF 94 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~ 94 (513)
.++..|++|+..+||+|+.+.|.+.++.+++
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~ 56 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQS 56 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHH
Confidence 3467899999999999999999999988887
No 253
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.89 E-value=4.3e-05 Score=70.41 Aligned_cols=31 Identities=23% Similarity=0.488 Sum_probs=28.0
Q ss_pred CCeEEEEEecCCCHHHhhhhHHHHHHHHHhC
Q 010286 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFN 95 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~ 95 (513)
++.+|++|+.+|||+|+.+.|.+.++.+.+.
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~ 55 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQA 55 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcC
Confidence 4678999999999999999999999988774
No 254
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.89 E-value=4.1e-06 Score=74.74 Aligned_cols=70 Identities=17% Similarity=0.282 Sum_probs=47.9
Q ss_pred cccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch-hcH----HHHHHCCCC
Q 010286 53 ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK-INT----NLCDKFSVG 127 (513)
Q Consensus 53 ~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d-~n~----~lc~~f~I~ 127 (513)
.+.+++.+.+. . ++.|+++|||+|++..+.++++. +.+..+|++.+ .+. ++.+.+++.
T Consensus 39 ~~~~~~~i~~~---~-Vvvf~~~~Cp~C~~~k~~L~~~~-------------i~~~~vdId~~~~~~~~~~~L~~~~g~~ 101 (146)
T 2ht9_A 39 VNQIQETISDN---C-VVIFSKTSCSYCTMAKKLFHDMN-------------VNYKVVELDLLEYGNQFQDALYKMTGER 101 (146)
T ss_dssp HHHHHHHHHHC---S-EEEEECTTCHHHHHHHHHHHHHT-------------CCCEEEEGGGCTTHHHHHHHHHHHHSCC
T ss_pred HHHHHHHhcCC---C-EEEEECCCChhHHHHHHHHHHcC-------------CCeEEEECccCcCCHHHHHHHHHHhCCC
Confidence 45677777663 3 44599999999999999998763 22345665432 112 488899999
Q ss_pred ccceEEEecCCccc
Q 010286 128 HYPMLLWGSPSKFV 141 (513)
Q Consensus 128 ~~PTl~~f~~g~~~ 141 (513)
++|++++ +|+..
T Consensus 102 tvP~ifi--~G~~i 113 (146)
T 2ht9_A 102 TVPRIFV--NGTFI 113 (146)
T ss_dssp CSCEEEE--TTEEE
T ss_pred CcCeEEE--CCEEE
Confidence 9999953 55443
No 255
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.84 E-value=3.7e-05 Score=68.51 Aligned_cols=82 Identities=20% Similarity=0.381 Sum_probs=60.0
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEe--------------------------------
Q 010286 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVD-------------------------------- 111 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VD-------------------------------- 111 (513)
.++.+||+|+.++||+|+++.|.++++ . .|.+..++
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~--------~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~ 80 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM----T--------DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMR 80 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC----C--------SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc----C--------ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHh
Confidence 357789999999999999999988754 1 13332221
Q ss_pred ----------c--cchhcHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 112 ----------C--ALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 112 ----------c--~~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
| ..+++.++++++||+++||+++ .+|+ .+.|..+.+.|.++|++..
T Consensus 81 ~g~~~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~----------------~i~G~~~~~~l~~~i~~~~ 138 (147)
T 3gv1_A 81 KGKFPVGGSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR----------------TQSGYSPMPQLEEIIRKNQ 138 (147)
T ss_dssp HCCCCTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC----------------EEESCCCTTHHHHHHHHTS
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE----------------EeeCCCCHHHHHHHHHHHH
Confidence 1 1134678899999999999987 4442 3567888999999998765
No 256
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.82 E-value=0.00012 Score=74.25 Aligned_cols=115 Identities=17% Similarity=0.115 Sum_probs=84.4
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHH----
Q 010286 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC---- 121 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc---- 121 (513)
+.+.+++.+++.........+..++.|+.+||++|..+.+.++++|+.+++. ..+.|+.+|++ ....++
T Consensus 226 p~v~elt~~~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~-----~~~~f~~id~~--~~~~~~~~~~ 298 (350)
T 1sji_A 226 PTLRRLRPEDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDN-----PDLSIVWIDPD--DFPLLVAYWE 298 (350)
T ss_dssp CSEEECCTTTHHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGC-----SSCCEEEECGG--GCHHHHHHHH
T ss_pred cchhhcChhhHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCC-----CceEEEEECch--hhHHHHHHHH
Confidence 4578899999988765432133456699999999999999999999999731 25889999985 567788
Q ss_pred HHCCCC-ccceEEEecCCcccCCCCCCccccch--hhhccCcCCHHHHHHHHHHhccc
Q 010286 122 DKFSVG-HYPMLLWGSPSKFVAGSWEPNQEKKE--IRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 122 ~~f~I~-~~PTl~~f~~g~~~~~~~~~~~~~~~--v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
+.||+. ++|++.++...+.. +-. .....|..+.+.|.+|+++.+..
T Consensus 299 ~~~gi~~~~P~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~i~~F~~d~~~G 347 (350)
T 1sji_A 299 KTFKIDLFKPQIGVVNVTDAD---------SVWMEIPDDDDLPTAEELEDWIEDVLSG 347 (350)
T ss_dssp HHCCSCTTSCEEEEEESSSSC---------EEESCSSCCSCCCCHHHHHHHHHHHHTS
T ss_pred hhcCCCccCCcEEEEeccccc---------ccccCCCcccccCCHHHHHHHHHHHhcC
Confidence 889998 58999998652110 000 01113578999999999998754
No 257
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.80 E-value=2.5e-05 Score=72.44 Aligned_cols=40 Identities=25% Similarity=0.535 Sum_probs=30.6
Q ss_pred CeEEEEEecCCCHHHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEec
Q 010286 66 TYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDC 112 (513)
Q Consensus 66 ~~vLV~FyA~WCg~Ck~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc 112 (513)
+++||+||+.|||||+++.|.+ +++.+.+. +.|.|..++.
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~ 57 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLP-------QGSRMVKYHV 57 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCC-------TTCCEEEEEC
T ss_pred CCEEEEEECCCChhHHHHhHhccchHHHHHhCC-------CCCEEEEEec
Confidence 5679999999999999999987 67777664 2355555543
No 258
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.79 E-value=1e-05 Score=69.34 Aligned_cols=67 Identities=10% Similarity=0.177 Sum_probs=46.8
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCCHHHhhh-hHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhc-----HHHHHHCCCC
Q 010286 54 TNFDAVLRDTPATYAVVEFFANWCPACRNY-KPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSVG 127 (513)
Q Consensus 54 ~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~-~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n-----~~lc~~f~I~ 127 (513)
+.+++.+... + ++.|+++|||+|++. .+.++++.. ..+.+..+|++.+.+ .++.+.+++.
T Consensus 16 ~~~~~~i~~~--~--Vvvf~~~~Cp~C~~alk~~L~~~~~----------~~i~~~~vdid~~~~~~~~~~~l~~~~g~~ 81 (118)
T 3c1r_A 16 KHVKDLIAEN--E--IFVASKTYCPYCHAALNTLFEKLKV----------PRSKVLVLQLNDMKEGADIQAALYEINGQR 81 (118)
T ss_dssp HHHHHHHHHS--S--EEEEECSSCHHHHHHHHHHHTTSCC----------CGGGEEEEEGGGSTTHHHHHHHHHHHHSCC
T ss_pred HHHHHHHccC--c--EEEEEcCCCcCHHHHHHHHHHHcCC----------CCCCeEEEECccCCChHHHHHHHHHHhCCC
Confidence 4566666653 2 667999999999998 777765431 125567778754322 4688889999
Q ss_pred ccceEEE
Q 010286 128 HYPMLLW 134 (513)
Q Consensus 128 ~~PTl~~ 134 (513)
++|++++
T Consensus 82 tvP~vfi 88 (118)
T 3c1r_A 82 TVPNIYI 88 (118)
T ss_dssp SSCEEEE
T ss_pred CcCEEEE
Confidence 9999843
No 259
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.77 E-value=8.8e-05 Score=67.44 Aligned_cols=32 Identities=25% Similarity=0.695 Sum_probs=28.6
Q ss_pred CCeEEEEEecCCCHHHhhhhHHHHHHHHHhCC
Q 010286 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNG 96 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~ 96 (513)
++++||+|+.-.||||++|.|.+.++.+.+.+
T Consensus 21 ~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~ 52 (184)
T 4dvc_A 21 SSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE 52 (184)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT
T ss_pred CCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC
Confidence 46789999999999999999999999888753
No 260
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.75 E-value=0.0001 Score=70.30 Aligned_cols=41 Identities=12% Similarity=0.161 Sum_probs=33.7
Q ss_pred eEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010286 67 YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (513)
Q Consensus 67 ~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (513)
.+|+.|+++||++|....|.+.++++++.+. ++.++.|.++
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~------~v~vi~IS~D 74 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKR------NVKLIALSID 74 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTT------TEEEEEEESS
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHC------CCEEEEEcCC
Confidence 4556668999999999999999999999753 3778888765
No 261
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.74 E-value=5.7e-05 Score=72.58 Aligned_cols=42 Identities=10% Similarity=0.195 Sum_probs=35.7
Q ss_pred CeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010286 66 TYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (513)
Q Consensus 66 ~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (513)
+++||.|| ++||+.|....|.+.++++++++. ++.++.|.++
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~------~v~vigIS~D 72 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR------GVKLIALSCD 72 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT------TEEEEEEESS
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc------CCEEEEEcCC
Confidence 48899998 999999999999999999999742 3778888764
No 262
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.72 E-value=4.1e-05 Score=72.89 Aligned_cols=93 Identities=15% Similarity=0.174 Sum_probs=60.6
Q ss_pred eEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--------------------------hcHHH
Q 010286 67 YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------INTNL 120 (513)
Q Consensus 67 ~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--------------------------~n~~l 120 (513)
.+|+.|+++||+.|....|.+.++++++++. ++.++.|.++.. .+.++
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~------~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~v 107 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKL------NCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESREL 107 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHH
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHc------CCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHH
Confidence 3444558999999999999999999999753 478888877531 12346
Q ss_pred HHHCCCC------------ccceEEEec-CCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 121 CDKFSVG------------HYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 121 c~~f~I~------------~~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
++.|++. .+|+++++. +|++... .+.....+++.++|+..|+...
T Consensus 108 a~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~---------~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 108 ANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKAT---------VLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp HHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEE---------EEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHhCCCCcccccCCCCCcccceEEEECCCCEEEEE---------EecCCCCCCCHHHHHHHHHHHH
Confidence 6777773 357776663 4433210 0011123578899988887654
No 263
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.71 E-value=3.7e-05 Score=61.82 Aligned_cols=53 Identities=13% Similarity=0.429 Sum_probs=41.2
Q ss_pred EEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC-CCCccceEEE
Q 010286 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF-SVGHYPMLLW 134 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f-~I~~~PTl~~ 134 (513)
++.|+++||++|++..+.+++.. +.+..+|++.+...++.+.+ ++.++|++++
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~~-------------i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~~ 61 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKKG-------------VKYTDIDASTSLRQEMVQRANGRNTFPQIFI 61 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHHT-------------CCEEEECSCHHHHHHHHHHHHSSCCSCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHcC-------------CCcEEEECCHHHHHHHHHHhCCCCCcCEEEE
Confidence 78899999999999999888642 33556676423456788889 9999999854
No 264
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.71 E-value=7e-05 Score=68.08 Aligned_cols=63 Identities=11% Similarity=0.199 Sum_probs=44.2
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCCH-HHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc
Q 010286 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCP-ACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (513)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg-~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (513)
+...+..+++.+. +.+-+++++||+||++||+ .|....+.+.++.+.+++.+ ..|.++.|.++
T Consensus 14 dF~L~d~~G~~v~--l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~----~~v~~v~isvD 77 (170)
T 4hde_A 14 TFQFTNQDGKPFG--TKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEK----LDVQFVSFSVD 77 (170)
T ss_dssp CCEEECTTSCEEE--HHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTT----CCCEEEEEESC
T ss_pred CcEEECCCCCEEe--HHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhccc----ccceeEeeecC
Confidence 3445555555444 2233468999999999996 79999999999988886432 34667777653
No 265
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.70 E-value=0.00027 Score=65.01 Aligned_cols=108 Identities=9% Similarity=0.132 Sum_probs=77.8
Q ss_pred cCcccHHHHHhcC------CCCeEEEEEecCCCHHHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEEeccchhcH---
Q 010286 51 LNATNFDAVLRDT------PATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINT--- 118 (513)
Q Consensus 51 L~~~~f~~~l~~~------~~~~vLV~FyA~WCg~Ck~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~--- 118 (513)
.-..+|++++... ..|+++|+++++||..|..|.-.. +++.+.++ .++.+...|.+.+++.
T Consensus 35 F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~-------~nfV~w~~dv~~~e~~~~~ 107 (178)
T 2ec4_A 35 FFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLS-------QNFITWAWDLTKDSNRARF 107 (178)
T ss_dssp CCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHH-------HTEEEEEEECCSHHHHHHH
T ss_pred eeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHH-------cCEEEEEEeCCCchhhhhh
Confidence 3467788887554 468999999999999999998433 44556565 2478888998766532
Q ss_pred ----------HHHH---HCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 119 ----------NLCD---KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 119 ----------~lc~---~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
.++. .|++.+||++.++.+. ++ ..+.+..+.|..+++++++.+.+.+
T Consensus 108 ~~~~~~~~g~~~a~~~~~~~~~~~P~l~ii~~~---~~------~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 108 LTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGK---RS------SNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp HHHHHHHTCHHHHHHHHHSCSTTCSEEEEECCC---SS------CCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhcCCCCCCeEEEEEcC---CC------ceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 3444 4999999999997542 11 1144567899999999998876654
No 266
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.63 E-value=0.00021 Score=69.13 Aligned_cols=108 Identities=15% Similarity=0.231 Sum_probs=79.0
Q ss_pred cceecC-cccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCC
Q 010286 47 HAVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (513)
Q Consensus 47 ~v~~L~-~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~ 125 (513)
.+..|+ .+.++..+... ..++|-|+++| |....+.|.++|..+++ .+.|+.+. +.+++.+|+
T Consensus 7 ~v~~l~s~~~~~~~l~~~--~v~vvgff~~~---~~~~~~~f~~~A~~lr~-------~~~F~~~~-----~~~v~~~~~ 69 (252)
T 2h8l_A 7 ASVPLRTEEEFKKFISDK--DASIVGFFDDS---FSEAHSEFLKAASNLRD-------NYRFAHTN-----VESLVNEYD 69 (252)
T ss_dssp CEEECCSHHHHHHHHTSS--SCEEEEEESCT---TSHHHHHHHHHHHHTTT-------TSCEEEEC-----CHHHHHHHC
T ss_pred CceeecCHHHHHHHhhcC--CeEEEEEECCC---CChHHHHHHHHHHhccc-------CcEEEEEC-----hHHHHHHhC
Confidence 467774 56677777653 56799999998 55678899999999963 46787775 467999999
Q ss_pred CCccceEEEecCCcccCCCCCCccccchhhhc-cCcCCHHHHHHHHHHhccccC
Q 010286 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRAL-EDWQTADGLLTWINKQTSRSY 178 (513)
Q Consensus 126 I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~-~g~~~~e~L~~~i~~~l~~~~ 178 (513)
|.+ |++++|+++++.+. . .+....| .|..+.++|.+||..+.-+.+
T Consensus 70 ~~~-p~i~~fk~~~~~~k-f-----~e~~~~y~~g~~~~~~l~~fi~~~~~Plv 116 (252)
T 2h8l_A 70 DNG-EGIILFRPSHLTNK-F-----EDKTVAYTEQKMTSGKIKKFIQENIFGIC 116 (252)
T ss_dssp SSS-EEEEEECCGGGCCT-T-----SCSEEECCCSSCCHHHHHHHHHHHSSCSS
T ss_pred CCC-CcEEEEcchhhccc-c-----cccccccCCCCcCHHHHHHHHHhcccCCe
Confidence 997 99999987533211 0 0122457 788999999999998865433
No 267
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.61 E-value=3.4e-05 Score=70.34 Aligned_cols=60 Identities=10% Similarity=0.122 Sum_probs=45.1
Q ss_pred CeEEEEEecCCCHHHhhh-hHHHHHHHHHhCCCCCCCCCeEE-EEEEeccc-hhcHHHHHHCCCC-ccce
Q 010286 66 TYAVVEFFANWCPACRNY-KPQYEKVARLFNGPNAAHPGIIL-MTRVDCAL-KINTNLCDKFSVG-HYPM 131 (513)
Q Consensus 66 ~~vLV~FyA~WCg~Ck~~-~P~~~~lA~~~~~~~~~~~~~v~-~~~VDc~~-d~n~~lc~~f~I~-~~PT 131 (513)
+.+|+.||++||++|+.. .|.+.++++++++. .+. ++.|+.+. +.....++++++. .||.
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~------g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp~ 108 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK------GVDSVICVAINDPYTVNAWAEKIQAKDAIEF 108 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT------TCSEEEEEESSCHHHHHHHHHHTTCTTTSEE
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC------CCCEEEEEeCCCHHHHHHHHHHhCCCCceEE
Confidence 467788999999999999 99999999998643 255 77777642 2345567888884 6773
No 268
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.60 E-value=0.00018 Score=73.65 Aligned_cols=102 Identities=10% Similarity=0.151 Sum_probs=77.5
Q ss_pred CcceecC-cccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 46 DHAVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 46 ~~v~~L~-~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
+.+..++ .++++..+... +..++|.||++||+ ...+.|.++|..+. +.+.|+.++ +.+++++|
T Consensus 125 ~~v~~i~~~~~~~~~~~~~-~~~~vv~ff~~~~~---~~~~~f~~~A~~~~-------~~~~F~~~~-----~~~~~~~~ 188 (367)
T 3us3_A 125 DPVELIEGERELQAFENIE-DEIKLIGYFKNKDS---EHYKAFKEAAEEFH-------PYIPFFATF-----DSKVAKKL 188 (367)
T ss_dssp CSEEECCSHHHHHHHHHCC-SSCEEEEECSCTTC---HHHHHHHHHHHHHT-------TTSCEEEEC-----CHHHHHHH
T ss_pred CCcEEcCCHHHHHHHhccC-CCcEEEEEECCCCc---hHHHHHHHHHHhhc-------CCcEEEEEC-----CHHHHHHc
Confidence 4466774 57888888732 25679999999865 56789999999996 347788877 35799999
Q ss_pred CCCccceEEEecCCcccCCCCCCccccchhhhccC-cCCHHHHHHHHHHhccc
Q 010286 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED-WQTADGLLTWINKQTSR 176 (513)
Q Consensus 125 ~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g-~~~~e~L~~~i~~~l~~ 176 (513)
+|+. |+|++|+++. .....|.| .++.++|.+||..+.-+
T Consensus 189 ~v~~-p~i~lf~~~~------------~~~~~y~g~~~~~~~l~~fi~~~~~p 228 (367)
T 3us3_A 189 TLKL-NEIDFYEAFM------------EEPVTIPDKPNSEEEIVNFVEEHRRS 228 (367)
T ss_dssp TCCT-TCEEEECTTC------------SSCEECSSSSCCHHHHHHHHHHTCSC
T ss_pred CCCC-CeEEEEcCCC------------CCCeecCCCCCCHHHHHHHHHHcCcc
Confidence 9995 9999998741 11245677 49999999999987643
No 269
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.52 E-value=7.7e-05 Score=60.16 Aligned_cols=71 Identities=11% Similarity=0.052 Sum_probs=49.3
Q ss_pred EEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---hhc----HHHHHHCCCCccceEEEecCCccc
Q 010286 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---KIN----TNLCDKFSVGHYPMLLWGSPSKFV 141 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---d~n----~~lc~~f~I~~~PTl~~f~~g~~~ 141 (513)
++.|+++||++|++..+.++++.-. +-.+|++. +++ .++.+.+++.++|++++ +|+
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~gi~-------------~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~-- 76 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREGVD-------------FEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDK-- 76 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHTCC-------------CEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTE--
T ss_pred EEEEECCCChHHHHHHHHHHHcCCC-------------cEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCE--
Confidence 5779999999999999888876322 23344431 123 56778899999999986 332
Q ss_pred CCCCCCccccchhhhccCcCCHHHHHHHHH
Q 010286 142 AGSWEPNQEKKEIRALEDWQTADGLLTWIN 171 (513)
Q Consensus 142 ~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~ 171 (513)
..++.+.+.|.++|+
T Consensus 77 ---------------~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 77 ---------------HVLGYNEEKLKELIR 91 (92)
T ss_dssp ---------------EEESCCHHHHHHHHH
T ss_pred ---------------EEeCCCHHHHHHHhc
Confidence 123458888888875
No 270
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.46 E-value=0.00014 Score=69.36 Aligned_cols=95 Identities=5% Similarity=0.094 Sum_probs=60.5
Q ss_pred hcCCCCeEEEEEecCC-CHHHh-----hhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc--------------------
Q 010286 61 RDTPATYAVVEFFANW-CPACR-----NYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------- 114 (513)
Q Consensus 61 ~~~~~~~vLV~FyA~W-Cg~Ck-----~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------------------- 114 (513)
.+..++++||.||++| |+.|. ...|.|.++ +. .+.|+.|+++.
T Consensus 44 sd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~--------gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLs 112 (224)
T 3keb_A 44 ESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP--------HLKLIVITVDSPSSLARARHEHGLPNIALLS 112 (224)
T ss_dssp GGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT--------TSEEEEEESSCHHHHHHHHHHHCCTTCEEEE
T ss_pred HHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC--------CCEEEEEECCCHHHHHHHHHHcCCCCceEEE
Confidence 3334678999999999 99999 888888776 32 25666666542
Q ss_pred hh-cHHHHHHCCCCc---------cceEEEec-CCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 115 KI-NTNLCDKFSVGH---------YPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 115 d~-n~~lc~~f~I~~---------~PTl~~f~-~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
|. +.++++.|||.. .|+.+++. +|++... .....+.+..+.+++++.|.+..
T Consensus 113 D~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~--------~~~~~~~~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 113 TLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYS--------ERLANTRDFFDFDAIEKLLQEGE 175 (224)
T ss_dssp STTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEE--------EECSBTTCCCCHHHHHHHHHHHH
T ss_pred cCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEE--------EecCCCCCCCCHHHHHHHHHHhh
Confidence 22 356778888764 67776663 5544321 11112344567888888876654
No 271
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.46 E-value=0.00014 Score=60.46 Aligned_cols=68 Identities=10% Similarity=0.116 Sum_probs=45.3
Q ss_pred ccHHHHHhcCCCCeEEEEEec-----CCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhc--HHHHHHCCC
Q 010286 54 TNFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN--TNLCDKFSV 126 (513)
Q Consensus 54 ~~f~~~l~~~~~~~vLV~FyA-----~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n--~~lc~~f~I 126 (513)
+.+++.+... .+ |.|+. +|||+|++..+.++++. +.+..+|++.+.. ..+...+++
T Consensus 8 ~~~~~~i~~~---~v-vvf~~g~~~~~~C~~C~~~~~~L~~~~-------------i~~~~vdi~~~~~~~~~l~~~~g~ 70 (105)
T 2yan_A 8 ERLKVLTNKA---SV-MLFMKGNKQEAKCGFSKQILEILNSTG-------------VEYETFDILEDEEVRQGLKAYSNW 70 (105)
T ss_dssp HHHHHHHTSS---SE-EEEESBCSSSBCTTHHHHHHHHHHHHT-------------CCCEEEEGGGCHHHHHHHHHHHTC
T ss_pred HHHHHHhccC---CE-EEEEecCCCCCCCccHHHHHHHHHHCC-------------CCeEEEECCCCHHHHHHHHHHHCC
Confidence 4556666543 34 44777 99999999999988752 3456778743211 235666899
Q ss_pred CccceEEEecCCcc
Q 010286 127 GHYPMLLWGSPSKF 140 (513)
Q Consensus 127 ~~~PTl~~f~~g~~ 140 (513)
.++|++++ +|++
T Consensus 71 ~~vP~v~i--~g~~ 82 (105)
T 2yan_A 71 PTYPQLYV--KGEL 82 (105)
T ss_dssp CSSCEEEE--TTEE
T ss_pred CCCCeEEE--CCEE
Confidence 99999843 4543
No 272
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.43 E-value=0.00014 Score=57.91 Aligned_cols=56 Identities=18% Similarity=0.140 Sum_probs=39.6
Q ss_pred EEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--hcHHHHHHCCC-----CccceEEE
Q 010286 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--INTNLCDKFSV-----GHYPMLLW 134 (513)
Q Consensus 68 vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--~n~~lc~~f~I-----~~~PTl~~ 134 (513)
.++.|+++|||+|++..+.++++.. .+.+..||...+ ...++.+.++. .++|++++
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~i-----------~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i 67 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENNI-----------AFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI 67 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTC-----------CCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE
T ss_pred EEEEEEcCCChhHHHHHHHHHHcCC-----------CceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE
Confidence 3788999999999999888766421 144556665322 12467778888 99999965
No 273
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.42 E-value=0.00049 Score=66.46 Aligned_cols=107 Identities=15% Similarity=0.206 Sum_probs=78.5
Q ss_pred CcceecCc-ccHHHHHhc-CCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHH
Q 010286 46 DHAVELNA-TNFDAVLRD-TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (513)
Q Consensus 46 ~~v~~L~~-~~f~~~l~~-~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~ 123 (513)
+.+..|++ +++++.+.. . ..++|-|++++ |....+.|.++|+.++ +.+.|+.+. +.+++.+
T Consensus 6 P~v~~l~s~~~~~~~~~~~~--~v~vVgff~~~---~~~~~~~F~~~A~~lr-------~~~~F~~t~-----~~~v~~~ 68 (250)
T 3ec3_A 6 PPSKEILTLKQVQEFLKDGD--DVVILGVFQGV---GDPGYLQYQDAANTLR-------EDYKFHHTF-----STEIAKF 68 (250)
T ss_dssp CSSEECCCHHHHHHHHHHCS--SCEEEEECSCT---TCHHHHHHHHHHHHHT-------TTCCEEEEC-----CHHHHHH
T ss_pred CCceecCCHHHHHHHHhcCC--CeEEEEEEcCC---CchHHHHHHHHHHhhh-------cCcEEEEEC-----cHHHHHH
Confidence 34667754 888887765 3 56799999998 5678889999999996 347788765 4678999
Q ss_pred CCCCccceEEEecCCcccCCCCCCccccchhhhcc--CcCCHHHHHHHHHHhccc
Q 010286 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE--DWQTADGLLTWINKQTSR 176 (513)
Q Consensus 124 f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~--g~~~~e~L~~~i~~~l~~ 176 (513)
|+|++ |++++|+++.+.+. .. +....|. |..+.++|.+||..+.-+
T Consensus 69 ~~v~~-p~ivlfk~~~~~~k-fd-----e~~~~y~g~~~~~~~~l~~fi~~~~~P 116 (250)
T 3ec3_A 69 LKVSL-GKLVLMQPEKFQSK-YE-----PRMHVMDVQGSTEASAIKDYVVKHALP 116 (250)
T ss_dssp HTCCS-SEEEEECCGGGCCT-TS-----CSCEEEECCTTSCHHHHHHHHHHHSSC
T ss_pred cCCCC-CeEEEEecchhhcc-cc-----ccceeccCCCCCCHHHHHHHHHHcCCC
Confidence 99998 99999987533210 00 1123456 478999999999988643
No 274
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.38 E-value=0.00036 Score=66.04 Aligned_cols=99 Identities=14% Similarity=0.101 Sum_probs=67.1
Q ss_pred HhcCCCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------------------------
Q 010286 60 LRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------------------ 114 (513)
Q Consensus 60 l~~~~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------------------ 114 (513)
+.+.+++++|+.|| +.||+.|....+.+.+.+.++++. ++.++.|.++.
T Consensus 47 Lsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~------g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpl 120 (216)
T 3sbc_A 47 LDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQ------GAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPL 120 (216)
T ss_dssp GGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCE
T ss_pred hHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccC------CceEEEeecCchhhHHHHHHHHHHhCCccCcccce
Confidence 34445789999999 999999999999999999999753 37788887753
Q ss_pred --hhcHHHHHHCCCC------ccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHh
Q 010286 115 --KINTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (513)
Q Consensus 115 --d~n~~lc~~f~I~------~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~ 173 (513)
|.+.++++.|||- .++.++++ ++|+++. ..+....-+|+.++++..|+..
T Consensus 121 lsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~---------~~v~~~~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 121 LADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRH---------ITINDLPVGRNVDEALRLVEAF 179 (216)
T ss_dssp EECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEE---------EEEECTTBCCCHHHHHHHHHHH
T ss_pred EeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEE---------EEEcCCCCCCCHHHHHHHHHHh
Confidence 2345678888873 23444444 4443321 1122223468999998877653
No 275
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.35 E-value=9.1e-05 Score=62.40 Aligned_cols=68 Identities=16% Similarity=0.272 Sum_probs=43.8
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--hc----HHHHHHCCCC
Q 010286 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--IN----TNLCDKFSVG 127 (513)
Q Consensus 54 ~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--~n----~~lc~~f~I~ 127 (513)
+.+++.+... + ++.|+++|||+|++..+.++++. +.+..+|++.+ .+ ..+.+.+|+.
T Consensus 10 ~~~~~~i~~~--~--v~vy~~~~Cp~C~~~~~~L~~~~-------------i~~~~~di~~~~~~~~~~~~~l~~~~g~~ 72 (113)
T 3rhb_A 10 ESIRKTVTEN--T--VVIYSKTWCSYCTEVKTLFKRLG-------------VQPLVVELDQLGPQGPQLQKVLERLTGQH 72 (113)
T ss_dssp HHHHHHHHHS--S--EEEEECTTCHHHHHHHHHHHHTT-------------CCCEEEEGGGSTTHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHhcC--C--EEEEECCCChhHHHHHHHHHHcC-------------CCCeEEEeecCCCChHHHHHHHHHHhCCC
Confidence 3445555553 2 67799999999999999988642 22344555331 12 2255567999
Q ss_pred ccceEEEecCCcc
Q 010286 128 HYPMLLWGSPSKF 140 (513)
Q Consensus 128 ~~PTl~~f~~g~~ 140 (513)
.+|++++ +|+.
T Consensus 73 tvP~ifi--~g~~ 83 (113)
T 3rhb_A 73 TVPNVFV--CGKH 83 (113)
T ss_dssp SSCEEEE--TTEE
T ss_pred CcCEEEE--CCEE
Confidence 9999943 4543
No 276
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.32 E-value=0.0005 Score=56.86 Aligned_cols=54 Identities=13% Similarity=0.107 Sum_probs=37.0
Q ss_pred EEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc---hhcHHHH----HHCCCCccceEEE
Q 010286 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---KINTNLC----DKFSVGHYPMLLW 134 (513)
Q Consensus 68 vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---d~n~~lc----~~f~I~~~PTl~~ 134 (513)
.++.|+++|||+|++..+.++++.. .+-.+|++. ++..++. +.+++.++|++++
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~~i-------------~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i 83 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDLGV-------------DFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII 83 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTB-------------CEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred eEEEEcCCCCchHHHHHHHHHHcCC-------------CcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE
Confidence 3777999999999999999987532 233445432 1222332 3479999999986
No 277
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.29 E-value=0.00038 Score=64.59 Aligned_cols=30 Identities=27% Similarity=0.697 Sum_probs=26.8
Q ss_pred CeEEEEEecCCCHHHhhhhHHH---HHHHHHhC
Q 010286 66 TYAVVEFFANWCPACRNYKPQY---EKVARLFN 95 (513)
Q Consensus 66 ~~vLV~FyA~WCg~Ck~~~P~~---~~lA~~~~ 95 (513)
++.||+|+..|||||+++.|.+ .++.+.+.
T Consensus 22 ~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~ 54 (191)
T 3l9s_A 22 EPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLP 54 (191)
T ss_dssp SSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSC
T ss_pred CCeEEEEECCCChhHHHhChhccchHHHHHhCC
Confidence 5689999999999999999986 68888875
No 278
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.23 E-value=0.00021 Score=55.91 Aligned_cols=53 Identities=11% Similarity=0.206 Sum_probs=38.7
Q ss_pred EEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--hcHHHHHHCCCCccceEEE
Q 010286 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--INTNLCDKFSVGHYPMLLW 134 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--~n~~lc~~f~I~~~PTl~~ 134 (513)
++.|+++||++|++..+.+++.. +.+..+|++.+ ...++.+.+++.++|++++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~-------------i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~~ 57 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSKG-------------VSFQELPIDGNAAKREEMIKRSGRTTVPQIFI 57 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHT-------------CCCEEEECTTCSHHHHHHHHHHSSCCSCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHCC-------------CCcEEEECCCCHHHHHHHHHHhCCCCcCEEEE
Confidence 67799999999999998887641 33455666432 2235677899999999853
No 279
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=97.18 E-value=0.00051 Score=69.15 Aligned_cols=112 Identities=11% Similarity=0.035 Sum_probs=70.1
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc-----------
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----------- 114 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----------- 114 (513)
.+...+++++. +.+.+++++|+.|| +.||+.|...++.|.+. .. ..+.+..|+.+.
T Consensus 8 ~l~~~~G~~~~--Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~------~~~~v~gis~D~~~~~~~f~~~~ 75 (322)
T 4eo3_A 8 ELLTDEGKTFT--HVDLYGKYTILFFFPKAGTSGSTREAVEFSRE----NF------EKAQVVGISRDSVEALKRFKEKN 75 (322)
T ss_dssp EEEETTSCEEE--GGGTTTSEEEEEECSSTTSHHHHHHHHHHHHS----CC------TTEEEEEEESCCHHHHHHHHHHH
T ss_pred EEECCCcCEEe--HHHhCCCeEEEEEECCCCCCCCHHHHHHHHHH----hh------CCCEEEEEeCCCHHHHHHHHHhh
Confidence 34444444443 45556789999999 67999999988887541 11 237777787642
Q ss_pred --------hhcHHHHHHCCCC----ccceEEEe-cCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccccCCC
Q 010286 115 --------KINTNLCDKFSVG----HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSYGL 180 (513)
Q Consensus 115 --------d~n~~lc~~f~I~----~~PTl~~f-~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~~~l 180 (513)
|.+.++++.|||. .+|+.+++ ++|++.. ....+.-...++++++++++.......+
T Consensus 76 ~l~fp~l~D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~----------~~~~v~~~~h~~~~l~~~~~~~~~~~~~ 144 (322)
T 4eo3_A 76 DLKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGFVRK----------EWRRVKVEGHVQEVKEALDRLIEEDLSL 144 (322)
T ss_dssp TCCSEEEECTTCHHHHHTTCEETTEECCEEEEECTTSBEEE----------EEESCCSTTHHHHHHHHHHHHHHHHTSC
T ss_pred CCceEEEEcCchHHHHhcCCCCCCcCccEEEEECCCCEEEE----------EEeCCCccccHHHHHHHHhhhchhhhHH
Confidence 3456788899984 46766665 4554431 1112233456788888888776544443
No 280
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.13 E-value=0.0025 Score=59.48 Aligned_cols=43 Identities=28% Similarity=0.499 Sum_probs=32.0
Q ss_pred CCCeEEEEEecCCCHHHhhhhHHH-HHHHHHhCCCCCCCCCeEEEEEEe
Q 010286 64 PATYAVVEFFANWCPACRNYKPQY-EKVARLFNGPNAAHPGIILMTRVD 111 (513)
Q Consensus 64 ~~~~vLV~FyA~WCg~Ck~~~P~~-~~lA~~~~~~~~~~~~~v~~~~VD 111 (513)
..+..||+|+...||+|++|.|.+ ..+.+.|.+. +.|.|...+
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~-----g~v~~~~~~ 71 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDK-----GDVKFSFVN 71 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTT-----TSEEEEEEE
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccC-----CeEEEEEEe
Confidence 346789999999999999999886 5676666421 356666554
No 281
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.03 E-value=0.00058 Score=54.87 Aligned_cols=52 Identities=13% Similarity=0.353 Sum_probs=37.9
Q ss_pred EEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh--cHHHHHHCCCCccceEE
Q 010286 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFSVGHYPMLL 133 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~--n~~lc~~f~I~~~PTl~ 133 (513)
++.|+++||++|++..+.+++. . +.+..+|++.+. ..++.+.+++.++|+++
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~----~---------i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~ 61 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARK----G---------AEFNEIDASATPELRAEMQERSGRNTFPQIF 61 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT----T---------CCCEEEESTTSHHHHHHHHHHHTSSCCCEEE
T ss_pred EEEEECCCChhHHHHHHHHHHc----C---------CCcEEEECCCCHHHHHHHHHHhCCCCcCEEE
Confidence 7889999999999999888763 1 345567764321 23466688999999864
No 282
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.02 E-value=0.00028 Score=61.24 Aligned_cols=68 Identities=10% Similarity=0.156 Sum_probs=45.8
Q ss_pred cccHHHHHhcCCCCeEEEEEecCCCHHHhhh-hHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhc-----HHHHHHCCC
Q 010286 53 ATNFDAVLRDTPATYAVVEFFANWCPACRNY-KPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSV 126 (513)
Q Consensus 53 ~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~-~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n-----~~lc~~f~I 126 (513)
.+.+++.+... + ++.|+.+|||+|++. .+.++++... .+.+..+|++.+.+ .++.+.+|+
T Consensus 27 ~~~v~~~i~~~--~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~----------~i~~~~vdvd~~~~~~~~~~~L~~~~g~ 92 (129)
T 3ctg_A 27 VAHVKDLIGQK--E--VFVAAKTYCPYCKATLSTLFQELNVP----------KSKALVLELDEMSNGSEIQDALEEISGQ 92 (129)
T ss_dssp HHHHHHHHHHS--S--EEEEECTTCHHHHHHHHHHHTTSCCC----------GGGEEEEEGGGSTTHHHHHHHHHHHHSC
T ss_pred HHHHHHHHcCC--C--EEEEECCCCCchHHHHHHHHHhcCcc----------CCCcEEEEccccCCHHHHHHHHHHHhCC
Confidence 35566677653 2 688999999999998 7777654311 13344555543322 468888999
Q ss_pred CccceEEE
Q 010286 127 GHYPMLLW 134 (513)
Q Consensus 127 ~~~PTl~~ 134 (513)
..+|++++
T Consensus 93 ~tVP~vfi 100 (129)
T 3ctg_A 93 KTVPNVYI 100 (129)
T ss_dssp CSSCEEEE
T ss_pred CCCCEEEE
Confidence 99999743
No 283
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.00 E-value=0.00081 Score=56.82 Aligned_cols=68 Identities=12% Similarity=0.215 Sum_probs=45.7
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhc-----HHHHHHCCCCc
Q 010286 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSVGH 128 (513)
Q Consensus 54 ~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n-----~~lc~~f~I~~ 128 (513)
+.+++.+... + ++.|+.+|||+|++..+.++++. +.+..+|++...+ ..+.+..|...
T Consensus 8 ~~~~~~i~~~--~--v~vy~~~~Cp~C~~ak~~L~~~~-------------i~~~~~dvd~~~~~~~~~~~l~~~~g~~t 70 (114)
T 3h8q_A 8 RHLVGLIERS--R--VVIFSKSYCPHSTRVKELFSSLG-------------VECNVLELDQVDDGARVQEVLSEITNQKT 70 (114)
T ss_dssp HHHHHHHHHC--S--EEEEECTTCHHHHHHHHHHHHTT-------------CCCEEEETTTSTTHHHHHHHHHHHHSCCS
T ss_pred HHHHHHhccC--C--EEEEEcCCCCcHHHHHHHHHHcC-------------CCcEEEEecCCCChHHHHHHHHHHhCCCc
Confidence 4567777653 2 56699999999999998888642 2344556543222 33567788999
Q ss_pred cceEEEecCCcc
Q 010286 129 YPMLLWGSPSKF 140 (513)
Q Consensus 129 ~PTl~~f~~g~~ 140 (513)
+|++++ +|+.
T Consensus 71 vP~vfi--~g~~ 80 (114)
T 3h8q_A 71 VPNIFV--NKVH 80 (114)
T ss_dssp SCEEEE--TTEE
T ss_pred cCEEEE--CCEE
Confidence 999966 4443
No 284
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=96.95 E-value=0.0014 Score=62.13 Aligned_cols=99 Identities=9% Similarity=0.149 Sum_probs=66.4
Q ss_pred HhcCCCCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccc------------------------
Q 010286 60 LRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------------------ 114 (513)
Q Consensus 60 l~~~~~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------------------ 114 (513)
+.+.+++++|+.|| +.||+.|......|.+...+|++. ++.++.|.++.
T Consensus 51 Lsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~------g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpl 124 (219)
T 3tue_A 51 LSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNEL------NCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPI 124 (219)
T ss_dssp GGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTT------TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCE
T ss_pred hHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccC------CcEEEEeeCCchhhHHHHhhhhHHhcCcccccccc
Confidence 34445789999999 999999999999999999999864 37788887753
Q ss_pred --hhcHHHHHHCCCC----ccc---eEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHh
Q 010286 115 --KINTNLCDKFSVG----HYP---MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (513)
Q Consensus 115 --d~n~~lc~~f~I~----~~P---Tl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~ 173 (513)
|.+.++++.|||- +++ |+++-++|++.. ..+....-+++.++++..|+..
T Consensus 125 lsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~---------~~~~~~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 125 LADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQ---------ITVNDMPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp EECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEE---------EEEECTTCCCCHHHHHHHHHHH
T ss_pred ccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEE---------EEEecCCCCCCHHHHHHHHHHh
Confidence 2345678888873 333 333334443321 1112223457888888887653
No 285
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.94 E-value=0.0078 Score=53.21 Aligned_cols=112 Identities=12% Similarity=0.181 Sum_probs=77.6
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEE-EecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 46 DHAVELNATNFDAVLRDTPATYAVVE-FFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vLV~-FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
.-|.++|.+|........ -++.+. |...-=..=..+.+.++++|+.++ +.+.|+.||.+.+.+..+...|
T Consensus 14 PLV~e~t~en~~~~~~~~--~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fk-------gki~Fv~vd~~~~~~~~~l~~f 84 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIFGGE--IKTHILLFLPKSVSDYDGKLSNFKTAAESFK-------GKILFAFIDSDHTDNQRILEFF 84 (147)
T ss_dssp -CEEECCTTTHHHHHSSS--CCEEEEEECCTTSSSHHHHHHHHHHHHHTTT-------TTCEEEEECTTCGGGHHHHHHT
T ss_pred CeeEEeccccHHHHhcCC--CceEEEEEecCCcHhHHHHHHHHHHHHHHcC-------CceEEEEEecchHhHHHHHHHc
Confidence 458899999987775442 333333 443233335567899999999997 5699999997545677789999
Q ss_pred CCCc--cceEEEecC-CcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcccc
Q 010286 125 SVGH--YPMLLWGSP-SKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 125 ~I~~--~PTl~~f~~-g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~ 177 (513)
|+.. .|++.++.. +.. .....-.+..+.+.|.+|+++.+...
T Consensus 85 Gl~~~~~P~v~i~~~~~~~-----------~Ky~~~~~~~t~~~i~~Fv~d~l~Gk 129 (147)
T 3bj5_A 85 GLKKEECPAVRLITLEEEM-----------TKYKPESEELTAERITEFCHRFLEGK 129 (147)
T ss_dssp TCCGGGCSEEEEEECSSSC-----------EEECCSCCCCCHHHHHHHHHHHHTTC
T ss_pred CCCcccCCEEEEEeccccc-----------ccCCCCcccCCHHHHHHHHHHHHcCC
Confidence 9996 899998753 210 11111136788999999999988654
No 286
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.94 E-value=0.00079 Score=55.52 Aligned_cols=54 Identities=7% Similarity=0.120 Sum_probs=37.6
Q ss_pred EEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh--cHHHHHHC-CCCccceEEE
Q 010286 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKF-SVGHYPMLLW 134 (513)
Q Consensus 68 vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~--n~~lc~~f-~I~~~PTl~~ 134 (513)
-++.|+++|||+|++..+.++++. +.+..+|++.+. ..++.+.. +..++|++++
T Consensus 17 ~v~vy~~~~Cp~C~~ak~~L~~~~-------------i~y~~idI~~~~~~~~~l~~~~~g~~~vP~ifi 73 (99)
T 3qmx_A 17 KIEIYTWSTCPFCMRALALLKRKG-------------VEFQEYCIDGDNEAREAMAARANGKRSLPQIFI 73 (99)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHHT-------------CCCEEEECTTCHHHHHHHHHHTTTCCCSCEEEE
T ss_pred CEEEEEcCCChhHHHHHHHHHHCC-------------CCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEEE
Confidence 478899999999999999988752 334556664321 12344445 8999999854
No 287
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.91 E-value=0.0018 Score=52.74 Aligned_cols=76 Identities=14% Similarity=0.156 Sum_probs=49.6
Q ss_pred EEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhc--HHHHHH-CCCCccceEEEecCCcccCCCC
Q 010286 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN--TNLCDK-FSVGHYPMLLWGSPSKFVAGSW 145 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n--~~lc~~-f~I~~~PTl~~f~~g~~~~~~~ 145 (513)
++.|..+|||+|++.+..+++. .|.+-.+|++.+.. ..+.+. .|.+.+|++++ .+|.+
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~~-------------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg~~----- 66 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTAN-------------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADGST----- 66 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHHT-------------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTSCE-----
T ss_pred EEEEcCCCCHhHHHHHHHHHhc-------------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCCEE-----
Confidence 7889999999999988777652 25566778743221 122222 27889999875 33321
Q ss_pred CCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 146 EPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 146 ~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
-.+.+.++|.++|.+..+
T Consensus 67 ------------l~~~~~~el~~~L~el~g 84 (92)
T 2lqo_A 67 ------------LTNPSADEVKAKLVKIAG 84 (92)
T ss_dssp ------------EESCCHHHHHHHHHHHHC
T ss_pred ------------EeCCCHHHHHHHHHHhcC
Confidence 123577888888887765
No 288
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.85 E-value=0.007 Score=57.56 Aligned_cols=42 Identities=17% Similarity=0.354 Sum_probs=30.9
Q ss_pred CCeEEEEEecCCCHHHhhhhHH-HHHHHHHhCCCCCCCCCeEEEEEEe
Q 010286 65 ATYAVVEFFANWCPACRNYKPQ-YEKVARLFNGPNAAHPGIILMTRVD 111 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~-~~~lA~~~~~~~~~~~~~v~~~~VD 111 (513)
.+..||+|+...||+|++|.|. +.++.+.|-+. +.|.+...+
T Consensus 39 A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~-----g~V~~v~~~ 81 (226)
T 3f4s_A 39 APILMIEYASLTCYHCSLFHRNVFPKIKEKYIDT-----GKMLYIFRH 81 (226)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTT-----TSEEEEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccC-----CeEEEEEEe
Confidence 4567999999999999999996 47787777421 346555443
No 289
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=96.55 E-value=0.0085 Score=61.33 Aligned_cols=111 Identities=11% Similarity=0.064 Sum_probs=77.9
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCC-HHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHC
Q 010286 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWC-PACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WC-g~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f 124 (513)
+.+.+++.+++...... +.+++|.|+.++| ..++.+...+.+++..++ +.+.|+.+|++ .+..++..|
T Consensus 219 p~v~elt~~~~~~~~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~-------~~i~f~~id~~--~~~~~~~~~ 287 (382)
T 2r2j_A 219 PLVREITFENGEELTEE--GLPFLILFHMKEDTESLEIFQNEVARQLISEK-------GTINFLHADCD--KFRHPLLHI 287 (382)
T ss_dssp CSSEECCHHHHHHHHTT--CCCEEEEEECTTCCHHHHHHHHHHHHHTGGGT-------TTSEEEEEETT--TTHHHHHHT
T ss_pred CceEecChhhHHHHhcC--CCcEEEEEecCCchHHHHHHHHHHHHHHHHhC-------CeeEEEEEchH--HhHHHHHHc
Confidence 35678888888876644 3678899999997 445666666666655554 46999999984 577889999
Q ss_pred CCC--ccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccccC
Q 010286 125 SVG--HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (513)
Q Consensus 125 ~I~--~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~~~ 178 (513)
|+. .+|.+.++..++.. ....+.+..+.+.|.+|+++.+...+
T Consensus 288 gl~~~~~P~i~i~~~~~~y-----------~~~~~~~~~~~~~i~~F~~d~~~Gkl 332 (382)
T 2r2j_A 288 QKTPADCPVIAIDSFRHMY-----------VFGDFKDVLIPGKLKQFVFDLHSGKL 332 (382)
T ss_dssp TCCGGGCSEEEEECSSCEE-----------ECCCSGGGGSTTHHHHHHHHHHHTTT
T ss_pred CCCccCCCEEEEEcchhcC-----------CCCccccccCHHHHHHHHHHHHCCCc
Confidence 998 68999887543210 01112345577899999999876543
No 290
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.52 E-value=0.0032 Score=52.53 Aligned_cols=64 Identities=13% Similarity=0.162 Sum_probs=43.6
Q ss_pred cccHHHHHhcCCCCeEEEEEec-----CCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh--cHHHHHHCC
Q 010286 53 ATNFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFS 125 (513)
Q Consensus 53 ~~~f~~~l~~~~~~~vLV~FyA-----~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~--n~~lc~~f~ 125 (513)
.+.+++.+... + +|.|+. +|||+|++..+.+++. . +.+..+|++.+. -.++...++
T Consensus 5 ~~~~~~~i~~~--~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~----~---------i~~~~vdi~~~~~~~~~l~~~~g 67 (109)
T 1wik_A 5 SSGLKVLTNKA--S--VMLFMKGNKQEAKCGFSKQILEILNST----G---------VEYETFDILEDEEVRQGLKTFSN 67 (109)
T ss_dssp CCCHHHHHTTS--S--EEEEESSTTTCCCSSTHHHHHHHHHHT----C---------SCEEEEESSSCHHHHHHHHHHHS
T ss_pred HHHHHHHhccC--C--EEEEEecCCCCCCCchHHHHHHHHHHc----C---------CCeEEEECCCCHHHHHHHHHHhC
Confidence 35677777653 3 455777 9999999999888764 1 456777875321 124556678
Q ss_pred CCccceEE
Q 010286 126 VGHYPMLL 133 (513)
Q Consensus 126 I~~~PTl~ 133 (513)
...+|+++
T Consensus 68 ~~~vP~if 75 (109)
T 1wik_A 68 WPTYPQLY 75 (109)
T ss_dssp CCSSCEEE
T ss_pred CCCCCEEE
Confidence 89999864
No 291
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.46 E-value=0.0013 Score=60.59 Aligned_cols=30 Identities=27% Similarity=0.370 Sum_probs=27.9
Q ss_pred CCeEEEEEecCCCHHHhhhhHHHHHHHHHh
Q 010286 65 ATYAVVEFFANWCPACRNYKPQYEKVARLF 94 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~ 94 (513)
++++||+|++.|||||+++.|.++++.+.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 367899999999999999999999999988
No 292
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=96.00 E-value=0.013 Score=53.43 Aligned_cols=69 Identities=12% Similarity=0.164 Sum_probs=45.5
Q ss_pred cHHHHHhcCCCCe-EEEEEecCCCHHHhh-hhHHHHHHHHHhCCCCCCCCCeE-EEEEEeccc-hhcHHHHHHCCCC-cc
Q 010286 55 NFDAVLRDTPATY-AVVEFFANWCPACRN-YKPQYEKVARLFNGPNAAHPGII-LMTRVDCAL-KINTNLCDKFSVG-HY 129 (513)
Q Consensus 55 ~f~~~l~~~~~~~-vLV~FyA~WCg~Ck~-~~P~~~~lA~~~~~~~~~~~~~v-~~~~VDc~~-d~n~~lc~~f~I~-~~ 129 (513)
++.+.+.+ ++ +|+.|++.|||.|.. ..|.|.+.++++++.+ + .++.|.++. ......++++++. .|
T Consensus 40 sLsd~~~G---k~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g------~d~VigIS~D~~~~~~~f~~~~~l~~~f 110 (176)
T 4f82_A 40 SVRDQVAG---KRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAG------IDEIWCVSVNDAFVMGAWGRDLHTAGKV 110 (176)
T ss_dssp EHHHHHTT---CEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT------CCEEEEEESSCHHHHHHHHHHTTCTTTS
T ss_pred eHHHHhCC---CeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCC------CCEEEEEeCCCHHHHHHHHHHhCCCCCc
Confidence 44554443 44 456667999999999 9999999999997532 4 555565532 2345567777765 34
Q ss_pred ceE
Q 010286 130 PML 132 (513)
Q Consensus 130 PTl 132 (513)
|.+
T Consensus 111 ~lL 113 (176)
T 4f82_A 111 RMM 113 (176)
T ss_dssp EEE
T ss_pred eEE
Confidence 433
No 293
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=95.83 E-value=0.051 Score=49.27 Aligned_cols=31 Identities=19% Similarity=0.369 Sum_probs=26.2
Q ss_pred CCeEEEEEecCCCHHHhhhhHHH-HHHHHHhC
Q 010286 65 ATYAVVEFFANWCPACRNYKPQY-EKVARLFN 95 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~-~~lA~~~~ 95 (513)
.+..|++|+..-||+|+.+.|.+ .++.+.|.
T Consensus 11 a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~ 42 (186)
T 3bci_A 11 GKPLVVVYGDYKCPYCKELDEKVMPKLRKNYI 42 (186)
T ss_dssp CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHHHHhc
Confidence 45679999999999999999998 56777764
No 294
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=95.22 E-value=0.11 Score=48.41 Aligned_cols=42 Identities=24% Similarity=0.412 Sum_probs=29.7
Q ss_pred CCeEEEEEecCCCHHHhhhhHHHHHHHH-HhCCCCCCCCCeEEEEEEe
Q 010286 65 ATYAVVEFFANWCPACRNYKPQYEKVAR-LFNGPNAAHPGIILMTRVD 111 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~~~lA~-~~~~~~~~~~~~v~~~~VD 111 (513)
.+.+||+|...-||+|+++.+.....-+ .|-+. ++|.+.-.+
T Consensus 15 a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~-----g~v~~v~r~ 57 (205)
T 3gmf_A 15 AKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQP-----GKGAIEVRN 57 (205)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTT-----TSEEEEEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccC-----CeEEEEEEe
Confidence 4667999999999999999988755444 66321 456665433
No 295
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=95.12 E-value=0.062 Score=51.44 Aligned_cols=109 Identities=11% Similarity=0.186 Sum_probs=74.2
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCH---HH-hhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHH
Q 010286 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCP---AC-RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC 121 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg---~C-k~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc 121 (513)
+.|.+++.+|+... .+ .+++|.|+..-+. .+ ..+...+.++|+.+++.. ..+.|+.+|+. ....+.
T Consensus 114 Plv~e~t~~n~~~~-~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~----~~~~F~~~d~~--~~~~~~ 183 (252)
T 2h8l_A 114 GICPHMTEDNKDLI-QG---KDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAG----HKLNFAVASRK--TFSHEL 183 (252)
T ss_dssp CSSCEECTTTHHHH-SS---SSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTT----CCCEEEEEETT--TTHHHH
T ss_pred CCeeecccccHhhh-cC---CCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccC----ceEEEEEEchH--HHHHHH
Confidence 45778888888875 33 3456777754321 22 247888999999997421 24999999974 567789
Q ss_pred HHCCC----CccceEEEecCCcccCCCCCCccccchhhhccCcCCHHH--HHHHHHHhcccc
Q 010286 122 DKFSV----GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADG--LLTWINKQTSRS 177 (513)
Q Consensus 122 ~~f~I----~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~--L~~~i~~~l~~~ 177 (513)
..||+ ..+|.+.++... + .. ..+.+..+.+. |.+|+++.+...
T Consensus 184 ~~fgl~~~~~~~P~v~i~~~~----~--------~k-y~~~~~~t~~~~~i~~F~~~~~~Gk 232 (252)
T 2h8l_A 184 SDFGLESTAGEIPVVAIRTAK----G--------EK-FVMQEEFSRDGKALERFLQDYFDGN 232 (252)
T ss_dssp GGGTCCCCSCSSCEEEEECTT----S--------CE-EECCSCCCTTSHHHHHHHHHHHHTC
T ss_pred HHcCCCCccCCCCEEEEEeCc----C--------cE-ecCCcccCcchHHHHHHHHHHHCCC
Confidence 99999 369999987431 0 11 12345677788 999999987543
No 296
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=95.03 E-value=0.019 Score=49.50 Aligned_cols=67 Identities=15% Similarity=0.112 Sum_probs=43.2
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhc-----HHHHHHCCCCc
Q 010286 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSVGH 128 (513)
Q Consensus 54 ~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n-----~~lc~~f~I~~ 128 (513)
++|++++... . +|.|..+|||+|++....+++.. .+. +.+..+|++.+.+ ..+.+..|.+.
T Consensus 5 ~~~~~ii~~~---~-Vvvysk~~Cp~C~~ak~lL~~~~-~~~---------v~~~~idid~~~d~~~~~~~l~~~~G~~t 70 (127)
T 3l4n_A 5 KEYSLILDLS---P-IIIFSKSTCSYSKGMKELLENEY-QFI---------PNYYIIELDKHGHGEELQEYIKLVTGRGT 70 (127)
T ss_dssp HHHHHHHTSC---S-EEEEECTTCHHHHHHHHHHHHHE-EEE---------SCCEEEEGGGSTTHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHccC---C-EEEEEcCCCccHHHHHHHHHHhc-ccC---------CCcEEEEecCCCCHHHHHHHHHHHcCCCC
Confidence 5678877663 2 78899999999999988877631 011 2234455433222 22444568899
Q ss_pred cceEEE
Q 010286 129 YPMLLW 134 (513)
Q Consensus 129 ~PTl~~ 134 (513)
+|++++
T Consensus 71 VP~IfI 76 (127)
T 3l4n_A 71 VPNLLV 76 (127)
T ss_dssp SCEEEE
T ss_pred cceEEE
Confidence 999965
No 297
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=94.33 E-value=0.18 Score=47.68 Aligned_cols=75 Identities=16% Similarity=0.111 Sum_probs=52.4
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCC
Q 010286 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (513)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~ 127 (513)
+...+.++++..+.....+++.+.|...-|. ...+++.++... ..+.+..++ +.+.+++++|+|+
T Consensus 140 l~~~~~~~l~~~~~~~~~~~~al~f~~~~~~-------~~~~~~~d~~~~-----~~i~v~~~~---~~~~~l~~~f~v~ 204 (244)
T 3q6o_A 140 LEPAXLEEIDGFFARNNEEYLALIFEXGGSY-------LAREVALDLSQH-----KGVAVRRVL---NTEANVVRKFGVT 204 (244)
T ss_dssp CSCCCHHHHHTHHHHCCCSEEEEEEECTTCC-------HHHHHHHHTTTC-----TTEEEEEEE---TTCHHHHHHHTCC
T ss_pred cccccHHHHHHHhhcCCCceEEEEEEECCcc-------hHHHHHHHhccC-----CceEEEEEe---CchHHHHHHcCCC
Confidence 4455667788777666567777777776543 345555566543 247777776 4568999999999
Q ss_pred ccceEEEecC
Q 010286 128 HYPMLLWGSP 137 (513)
Q Consensus 128 ~~PTl~~f~~ 137 (513)
++||+++|.+
T Consensus 205 ~~Pslvl~~~ 214 (244)
T 3q6o_A 205 DFPSCYLLFR 214 (244)
T ss_dssp CSSEEEEEET
T ss_pred CCCeEEEEeC
Confidence 9999988754
No 298
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=94.32 E-value=0.16 Score=49.36 Aligned_cols=81 Identities=9% Similarity=0.094 Sum_probs=54.6
Q ss_pred eEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc----------------chhcHHHHHHCCCCcc-
Q 010286 67 YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA----------------LKINTNLCDKFSVGHY- 129 (513)
Q Consensus 67 ~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~----------------~d~n~~lc~~f~I~~~- 129 (513)
..+..|+.++|++|......+++++..+. +....++.+ .+++..+.+++|++++
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~~---------vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVy 114 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKGD---------VVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVY 114 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHTS---------SEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCC
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccCC---------eeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCccc
Confidence 45777999999999999999999987753 221222211 1234568889999988
Q ss_pred -ceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 130 -PMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 130 -PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
|.+++ +|+ ...++.+.+.|.+.|.+..
T Consensus 115 TPqI~I--ng~----------------~~v~G~d~~~l~~~l~~~~ 142 (270)
T 2axo_A 115 TPQAIL--NGR----------------DHVKGADVRGIYDRLDAFK 142 (270)
T ss_dssp SSEEEE--TTT----------------EEEETTCHHHHHHHHHHHH
T ss_pred CCEEEE--CCE----------------EeecCCCHHHHHHHHHHhh
Confidence 99876 221 1123456788888887654
No 299
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=94.22 E-value=0.11 Score=51.28 Aligned_cols=103 Identities=14% Similarity=0.180 Sum_probs=68.0
Q ss_pred Ccceec-CcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHH--H
Q 010286 46 DHAVEL-NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC--D 122 (513)
Q Consensus 46 ~~v~~L-~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc--~ 122 (513)
..+..+ +.++++..+... +.+++|.| .. .....+.|+++|..+. +.+.|+.++-. +-..+. +
T Consensus 143 ~~v~~i~~~~~l~~~l~~~-~~~~vi~f-s~----~~~~~~~f~~~A~~~~-------~~~~F~~v~~~--~~a~~~~~~ 207 (298)
T 3ed3_A 143 SYVKKFVRIDTLGSLLRKS-PKLSVVLF-SK----QDKISPVYKSIALDWL-------GKFDFYSISNK--KLKQLTDMN 207 (298)
T ss_dssp CCEEECSCGGGHHHHHTSC-SSEEEEEE-ES----SSSCCHHHHHHHHHTB-------TTEEEEEEEGG--GCCCCCTTC
T ss_pred cccEEcCCHHHHHHHHhcC-CceEEEEE-cC----CCcchHHHHHHHHHhh-------cCcEEEEEcch--Hhhhhhhhh
Confidence 456666 457898888765 46666666 33 2346789999999997 45999999832 111111 2
Q ss_pred HCC-----C-------------CccceEEEecCCcccCCCCCCccccchhhhccC-cCCHHHHHHHHHHhcc
Q 010286 123 KFS-----V-------------GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED-WQTADGLLTWINKQTS 175 (513)
Q Consensus 123 ~f~-----I-------------~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g-~~~~e~L~~~i~~~l~ 175 (513)
+|+ | ...|+|++|++.. .....|.| ..+.++|.+||.+...
T Consensus 208 ~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~------------~~~~~y~g~~~~~~~i~~fi~~~~~ 267 (298)
T 3ed3_A 208 PTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADK------------DKFWEYEGNSINKNDISKFLRDTFS 267 (298)
T ss_dssp TTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTT------------TEEEECCCSSCCHHHHHHHHHHHHT
T ss_pred hhcccCcchhhhhhcccccccccCCCeEEEEcCCC------------CceEEeccccCCHHHHHHHHHhhcC
Confidence 222 2 6799999997531 22345664 6899999999997654
No 300
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=93.42 E-value=0.12 Score=50.30 Aligned_cols=29 Identities=10% Similarity=0.189 Sum_probs=24.9
Q ss_pred CCeEEEEEecCCCHHHhhhhHHHHHHHHH
Q 010286 65 ATYAVVEFFANWCPACRNYKPQYEKVARL 93 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~ 93 (513)
++.+++.|+-+.||+|+++.+++++..++
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 46789999999999999999999865554
No 301
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=93.22 E-value=0.04 Score=47.97 Aligned_cols=65 Identities=9% Similarity=0.036 Sum_probs=40.5
Q ss_pred ccHHHHHhcCCCCeEEEEEec----CCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh--cHHHHHHCCCC
Q 010286 54 TNFDAVLRDTPATYAVVEFFA----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFSVG 127 (513)
Q Consensus 54 ~~f~~~l~~~~~~~vLV~FyA----~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~--n~~lc~~f~I~ 127 (513)
+.+++.+... .++|+.++ +|||+|++....++++ . +.+..+|++.+. -.++.+..|..
T Consensus 26 ~~v~~~i~~~---~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~----g---------v~y~~vdI~~d~~~~~~L~~~~G~~ 89 (135)
T 2wci_A 26 EKIQRQIAEN---PILLYMKGSPKLPSCGFSAQAVQALAAC----G---------ERFAYVDILQNPDIRAELPKYANWP 89 (135)
T ss_dssp HHHHHHHHHC---SEEEEESBCSSSBSSHHHHHHHHHHHTT----C---------SCCEEEEGGGCHHHHHHHHHHHTCC
T ss_pred HHHHHHhccC---CEEEEEEecCCCCCCccHHHHHHHHHHc----C---------CceEEEECCCCHHHHHHHHHHHCCC
Confidence 4556666653 34554444 8999999988877653 1 446677764321 12344456888
Q ss_pred ccceEEE
Q 010286 128 HYPMLLW 134 (513)
Q Consensus 128 ~~PTl~~ 134 (513)
.+|.+++
T Consensus 90 tvP~VfI 96 (135)
T 2wci_A 90 TFPQLWV 96 (135)
T ss_dssp SSCEEEE
T ss_pred CcCEEEE
Confidence 9998754
No 302
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=92.93 E-value=0.1 Score=47.22 Aligned_cols=41 Identities=22% Similarity=0.443 Sum_probs=32.5
Q ss_pred CCeEEEEEecCCCHHHhhhhHHH-HHHHHHhCCCCCCCCCeEEEEEEec
Q 010286 65 ATYAVVEFFANWCPACRNYKPQY-EKVARLFNGPNAAHPGIILMTRVDC 112 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~-~~lA~~~~~~~~~~~~~v~~~~VDc 112 (513)
.++++|+||...||+|..+.+.+ .++.+.+. +.|.+..+..
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~-------~~v~~~~~~l 58 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVK-------DIVAFTPFHL 58 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTT-------TTCEEEEEEC
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCC-------CceEEEEEec
Confidence 35679999999999999999999 99988875 2355555554
No 303
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=92.78 E-value=0.19 Score=53.64 Aligned_cols=77 Identities=16% Similarity=0.145 Sum_probs=57.3
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCC
Q 010286 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (513)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I 126 (513)
.+..++.+++++.+.....++++|.|...- .+...+++.++... ..|.+..++ +.+.+++++|||
T Consensus 139 ~l~~it~~~l~~~l~~~~~~~vallF~~~~-------s~~~~~~~ldl~~~-----~~v~v~~v~---~~~~~l~~kfgV 203 (519)
T 3t58_A 139 PLEPAKLNDIDGFFTRNKADYLALVFERED-------SYLGREVTLDLSQY-----HAVAVRRVL---NTESDLVNKFGV 203 (519)
T ss_dssp CCSBCCHHHHTTGGGSCCCSEEEEEEECTT-------CCHHHHHHHHTTTC-----TTEEEEEEE---TTCHHHHHHHTC
T ss_pred ccCcCCHHHHHHHhccCCCCeEEEEecCCc-------hHHHHHHHHHhhcc-----CCeeEEEec---CchHHHHHHcCC
Confidence 455667788887777766778888888654 44667787887643 247777766 456899999999
Q ss_pred CccceEEEecCC
Q 010286 127 GHYPMLLWGSPS 138 (513)
Q Consensus 127 ~~~PTl~~f~~g 138 (513)
+.+||+++|.++
T Consensus 204 ~~~Pslvl~~~n 215 (519)
T 3t58_A 204 TDFPSCYLLLRN 215 (519)
T ss_dssp CCSSEEEEEETT
T ss_pred CCCCeEEEEeCC
Confidence 999999998653
No 304
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=92.77 E-value=0.061 Score=42.45 Aligned_cols=53 Identities=13% Similarity=0.147 Sum_probs=35.9
Q ss_pred EEEEecC----CCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEecc-----ch--hcHHHHHHCCCC-----ccceE
Q 010286 69 VVEFFAN----WCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA-----LK--INTNLCDKFSVG-----HYPML 132 (513)
Q Consensus 69 LV~FyA~----WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~-----~d--~n~~lc~~f~I~-----~~PTl 132 (513)
++.|+.+ |||+|++....+++. . +.+-.+|++ .+ ...++.+..+.. .+|++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~----g---------i~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v 68 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK----K---------QPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQV 68 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT----T---------CCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEE
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc----C---------CCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEE
Confidence 5668899 999999988777653 1 345556654 21 123566777888 89988
Q ss_pred EE
Q 010286 133 LW 134 (513)
Q Consensus 133 ~~ 134 (513)
++
T Consensus 69 ~i 70 (87)
T 1aba_A 69 FA 70 (87)
T ss_dssp EC
T ss_pred EE
Confidence 64
No 305
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=92.10 E-value=0.12 Score=43.08 Aligned_cols=62 Identities=18% Similarity=0.162 Sum_probs=39.5
Q ss_pred HHHHHhcCCCCeEEEEEec-----CCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh--cHHHHHHCCCCc
Q 010286 56 FDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFSVGH 128 (513)
Q Consensus 56 f~~~l~~~~~~~vLV~FyA-----~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~--n~~lc~~f~I~~ 128 (513)
+++.+.+. + +|.|.. +|||+|++....+++. . +.+..+|++.+. -..+.+..|...
T Consensus 9 v~~~i~~~---~-Vvlf~kg~~~~~~Cp~C~~ak~~L~~~----g---------i~y~~~di~~d~~~~~~l~~~~g~~t 71 (111)
T 3zyw_A 9 LKKLTHAA---P-CMLFMKGTPQEPRCGFSKQMVEILHKH----N---------IQFSSFDIFSDEEVRQGLKAYSSWPT 71 (111)
T ss_dssp HHHHHTSS---S-EEEEESBCSSSBSSHHHHHHHHHHHHT----T---------CCCEEEEGGGCHHHHHHHHHHHTCCS
T ss_pred HHHHHhcC---C-EEEEEecCCCCCcchhHHHHHHHHHHc----C---------CCeEEEECcCCHHHHHHHHHHHCCCC
Confidence 44555553 3 677888 9999999988777653 1 345566764321 122333447889
Q ss_pred cceEEE
Q 010286 129 YPMLLW 134 (513)
Q Consensus 129 ~PTl~~ 134 (513)
+|.+++
T Consensus 72 vP~ifi 77 (111)
T 3zyw_A 72 YPQLYV 77 (111)
T ss_dssp SCEEEE
T ss_pred CCEEEE
Confidence 999865
No 306
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=92.03 E-value=0.21 Score=47.22 Aligned_cols=54 Identities=11% Similarity=0.167 Sum_probs=39.5
Q ss_pred EEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhc-HHHHHHCCCCccceEEE
Q 010286 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-TNLCDKFSVGHYPMLLW 134 (513)
Q Consensus 68 vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n-~~lc~~f~I~~~PTl~~ 134 (513)
.++.|..+||+.|++....+++.. +.+-.+|++.+.. .++.+.++..++|++++
T Consensus 171 ~i~ly~~~~Cp~C~~a~~~L~~~~-------------i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~~ 225 (241)
T 1nm3_A 171 SISIFTKPGCPFCAKAKQLLHDKG-------------LSFEEIILGHDATIVSVRAVSGRTTVPQVFI 225 (241)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHT-------------CCCEEEETTTTCCHHHHHHHTCCSSSCEEEE
T ss_pred eEEEEECCCChHHHHHHHHHHHcC-------------CceEEEECCCchHHHHHHHHhCCCCcCEEEE
Confidence 477889999999999988877531 3344566643332 56778899999999864
No 307
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=91.67 E-value=0.96 Score=42.96 Aligned_cols=106 Identities=13% Similarity=0.087 Sum_probs=71.0
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEec-CCC---HH-HhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHH
Q 010286 46 DHAVELNATNFDAVLRDTPATYAVVEFFA-NWC---PA-CRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNL 120 (513)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vLV~FyA-~WC---g~-Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~l 120 (513)
..|.+++.+|+..... +++.++.|+. +.. .. ...+...++++|+.++ .+.|+.+|. +++...
T Consensus 116 Plv~e~t~~n~~~~~~---~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k--------ki~F~~~d~--~~~~~~ 182 (250)
T 3ec3_A 116 PLVGHRKTSNDAKRYS---KRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP--------EYTFAIADE--EDYATE 182 (250)
T ss_dssp CTEEEECTTTHHHHSC---SSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT--------TSEEEEEET--TTTHHH
T ss_pred CceeecCccchhhhhc---cCccEEEEEecccccccchhHHHHHHHHHHHHHhhc--------ceeEEEEcH--HHHHHH
Confidence 4567888888877653 3566666665 333 33 3557889999999875 288999997 456778
Q ss_pred HHHCCCCc--cc-eEEEecCCcccCCCCCCccccchhhhcc-CcCCHHHHHHHHHHhcccc
Q 010286 121 CDKFSVGH--YP-MLLWGSPSKFVAGSWEPNQEKKEIRALE-DWQTADGLLTWINKQTSRS 177 (513)
Q Consensus 121 c~~f~I~~--~P-Tl~~f~~g~~~~~~~~~~~~~~~v~~~~-g~~~~e~L~~~i~~~l~~~ 177 (513)
.+.||+.. +| .++++... + .. ..+. +..+.+.|.+|+++.+...
T Consensus 183 l~~fgl~~~~~~p~~~~~~~~----~--------~k-y~~~~~~~t~~~i~~Fv~~~~~Gk 230 (250)
T 3ec3_A 183 VKDLGLSESGGDVNAAILDES----G--------KK-FAMEPEEFDSDALREFVMAFKKGK 230 (250)
T ss_dssp HHHTTCSSCSCSCEEEEECTT----S--------CE-EECCCCSCCHHHHHHHHHHHHTTC
T ss_pred HHHcCCCccCCCcEEEEEcCC----C--------ce-ecCCcccCCHHHHHHHHHHHHCCC
Confidence 88999974 55 56554321 0 01 1122 5679999999999988654
No 308
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=91.51 E-value=0.39 Score=43.75 Aligned_cols=62 Identities=11% Similarity=0.214 Sum_probs=42.9
Q ss_pred CCeEEEEEe-cCCCHHHh-hhhHHHHHHHHHh-CCCCCCCCCeE-EEEEEeccc-hhcHHHHHHCCCCccceE
Q 010286 65 ATYAVVEFF-ANWCPACR-NYKPQYEKVARLF-NGPNAAHPGII-LMTRVDCAL-KINTNLCDKFSVGHYPML 132 (513)
Q Consensus 65 ~~~vLV~Fy-A~WCg~Ck-~~~P~~~~lA~~~-~~~~~~~~~~v-~~~~VDc~~-d~n~~lc~~f~I~~~PTl 132 (513)
++++++.|| +.|||.|- ...+.|.+.+.++ ++.+ + .++.|.++. ......++++++..||.+
T Consensus 43 gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g------~~~V~gvS~D~~~~~~~~~~~~~~~~f~lL 109 (182)
T 1xiy_A 43 NKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENN------FDDIYCITNNDIYVLKSWFKSMDIKKIKYI 109 (182)
T ss_dssp TCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSC------CSEEEEEESSCHHHHHHHHHHTTCCSSEEE
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCC------CcEEEEEeCCCHHHHHHHHHHcCCCCceEE
Confidence 467777777 68999999 8999999999999 7533 3 355555432 234567778887545433
No 309
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=91.44 E-value=0.16 Score=34.94 Aligned_cols=29 Identities=31% Similarity=0.259 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHhhhhHHHHHH-HHHhhhcC
Q 010286 479 VGAALAIALASCAFGALACYW-RSQQKNRK 507 (513)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 507 (513)
++++++|+++-.+-+.+++|+ |.+||+||
T Consensus 15 a~~vVGvll~vi~~l~~~~~~RRR~~~~kK 44 (44)
T 2jwa_A 15 ISAVVGILLVVVLGVVFGILIKRRQQKIRK 44 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhheehhhhhccC
Confidence 455666555555555556676 55566554
No 310
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=91.31 E-value=0.28 Score=41.56 Aligned_cols=66 Identities=11% Similarity=0.037 Sum_probs=39.2
Q ss_pred cHHHHHhcCCCCeEEEEEec-----CCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--hcHHHHHHCCCC
Q 010286 55 NFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--INTNLCDKFSVG 127 (513)
Q Consensus 55 ~f~~~l~~~~~~~vLV~FyA-----~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--~n~~lc~~f~I~ 127 (513)
-+++++... . +|.|.. ||||+|++....+++..-.+ .. +..+|+..+ ....+.+..|-.
T Consensus 8 ~v~~~i~~~---~-Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~--------~~--~~~~dv~~~~~~~~~l~~~sg~~ 73 (121)
T 3gx8_A 8 AIEDAIESA---P-VVLFMKGTPEFPKCGFSRATIGLLGNQGVDP--------AK--FAAYNVLEDPELREGIKEFSEWP 73 (121)
T ss_dssp HHHHHHHSC---S-EEEEESBCSSSBCTTHHHHHHHHHHHHTBCG--------GG--EEEEECTTCHHHHHHHHHHHTCC
T ss_pred HHHHHhccC---C-EEEEEeccCCCCCCccHHHHHHHHHHcCCCc--------ce--EEEEEecCCHHHHHHHHHHhCCC
Confidence 345566653 2 455655 49999999988887752211 01 445555321 223344556788
Q ss_pred ccceEEE
Q 010286 128 HYPMLLW 134 (513)
Q Consensus 128 ~~PTl~~ 134 (513)
.+|.+++
T Consensus 74 tvP~vfI 80 (121)
T 3gx8_A 74 TIPQLYV 80 (121)
T ss_dssp SSCEEEE
T ss_pred CCCeEEE
Confidence 8999865
No 311
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=90.75 E-value=0.21 Score=41.39 Aligned_cols=63 Identities=13% Similarity=0.216 Sum_probs=38.7
Q ss_pred cHHHHHhcCCCCeEEEEEec-----CCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--hcHHHHHHCCCC
Q 010286 55 NFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--INTNLCDKFSVG 127 (513)
Q Consensus 55 ~f~~~l~~~~~~~vLV~FyA-----~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--~n~~lc~~f~I~ 127 (513)
.+++.+... . +|.|.. ||||+|++....+++.. +.+-.+|++.+ ....+.+..+..
T Consensus 10 ~v~~~i~~~---~-Vvvy~k~t~~~p~Cp~C~~ak~~L~~~g-------------i~~~~~dI~~~~~~~~~l~~~~g~~ 72 (109)
T 3ipz_A 10 TLEKLVNSE---K-VVLFMKGTRDFPMCGFSNTVVQILKNLN-------------VPFEDVNILENEMLRQGLKEYSNWP 72 (109)
T ss_dssp HHHHHHTSS---S-EEEEESBCSSSBSSHHHHHHHHHHHHTT-------------CCCEEEEGGGCHHHHHHHHHHHTCS
T ss_pred HHHHHHccC---C-EEEEEecCCCCCCChhHHHHHHHHHHcC-------------CCcEEEECCCCHHHHHHHHHHHCCC
Confidence 344555553 3 455665 49999999888777631 34556666322 123344455889
Q ss_pred ccceEEE
Q 010286 128 HYPMLLW 134 (513)
Q Consensus 128 ~~PTl~~ 134 (513)
.+|++++
T Consensus 73 tvP~ifi 79 (109)
T 3ipz_A 73 TFPQLYI 79 (109)
T ss_dssp SSCEEEE
T ss_pred CCCeEEE
Confidence 9998765
No 312
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.48 E-value=0.33 Score=40.31 Aligned_cols=53 Identities=13% Similarity=0.051 Sum_probs=33.7
Q ss_pred EEEEecCCCHHHh------hhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh-c-HHHHHHC--------CCCccceE
Q 010286 69 VVEFFANWCPACR------NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-N-TNLCDKF--------SVGHYPML 132 (513)
Q Consensus 69 LV~FyA~WCg~Ck------~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-n-~~lc~~f--------~I~~~PTl 132 (513)
++.|+.++|+.|+ +....+++ . .|.+..+|++.+. . .++...+ +...+|.+
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~L~~----~---------gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~v 76 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRFLEA----N---------KIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQI 76 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH----T---------TCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEE
T ss_pred EEEEEcCCCCCcccchhHHHHHHHHHH----c---------CCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEE
Confidence 6778999999999 44444432 2 2567778875321 1 2344444 77788988
Q ss_pred EE
Q 010286 133 LW 134 (513)
Q Consensus 133 ~~ 134 (513)
++
T Consensus 77 fi 78 (111)
T 2ct6_A 77 FN 78 (111)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 313
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=89.19 E-value=0.31 Score=41.15 Aligned_cols=64 Identities=13% Similarity=0.117 Sum_probs=38.9
Q ss_pred ccHHHHHhcCCCCeEEEEEec-----CCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEE-EEEEeccch-h-cHHHHHHCC
Q 010286 54 TNFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIIL-MTRVDCALK-I-NTNLCDKFS 125 (513)
Q Consensus 54 ~~f~~~l~~~~~~~vLV~FyA-----~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~-~~~VDc~~d-~-n~~lc~~f~ 125 (513)
+.+++++.+. . +|.|.. ||||+|++..-.+++. . +. +..+|++.+ + ...+.+..+
T Consensus 11 ~~v~~~i~~~---~-Vvvfsk~t~~~p~Cp~C~~ak~lL~~~----g---------v~~~~~vdV~~d~~~~~~l~~~tg 73 (118)
T 2wem_A 11 EQLDALVKKD---K-VVVFLKGTPEQPQCGFSNAVVQILRLH----G---------VRDYAAYNVLDDPELRQGIKDYSN 73 (118)
T ss_dssp HHHHHHHHHS---S-EEEEESBCSSSBSSHHHHHHHHHHHHT----T---------CCCCEEEESSSCHHHHHHHHHHHT
T ss_pred HHHHHHhccC---C-EEEEEecCCCCCccHHHHHHHHHHHHc----C---------CCCCEEEEcCCCHHHHHHHHHHhC
Confidence 3455667664 2 455666 4999999988777753 1 31 445555322 1 123444457
Q ss_pred CCccceEEE
Q 010286 126 VGHYPMLLW 134 (513)
Q Consensus 126 I~~~PTl~~ 134 (513)
-..+|++++
T Consensus 74 ~~tvP~vfI 82 (118)
T 2wem_A 74 WPTIPQVYL 82 (118)
T ss_dssp CCSSCEEEE
T ss_pred CCCcCeEEE
Confidence 889999865
No 314
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=88.78 E-value=0.24 Score=39.55 Aligned_cols=53 Identities=8% Similarity=-0.037 Sum_probs=34.8
Q ss_pred EEEEecCCCHHH------hhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchh--cHHHHHHCC--CCccceEEE
Q 010286 69 VVEFFANWCPAC------RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFS--VGHYPMLLW 134 (513)
Q Consensus 69 LV~FyA~WCg~C------k~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~--n~~lc~~f~--I~~~PTl~~ 134 (513)
++.|+.++||.| ++..-.+++ . .+.+..+|++.+. -.++.+.+| ...+|.+++
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~----~---------~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi 66 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG----K---------RIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVN 66 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH----T---------TCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH----C---------CCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEE
Confidence 677899999999 555444442 2 2556677875321 134566778 779999865
No 315
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=86.72 E-value=0.56 Score=42.33 Aligned_cols=57 Identities=9% Similarity=0.110 Sum_probs=41.3
Q ss_pred CCeEEEEEe-cCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeE-EEEEEeccc-hhcHHHHHHCCCC
Q 010286 65 ATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGII-LMTRVDCAL-KINTNLCDKFSVG 127 (513)
Q Consensus 65 ~~~vLV~Fy-A~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v-~~~~VDc~~-d~n~~lc~~f~I~ 127 (513)
++++|+.|| ..|||.|....+.|.+.+.++++.+ + .++.|.++. ....+.++++++.
T Consensus 42 gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~g------v~~VigIS~D~~~~~~~w~~~~~~~ 101 (171)
T 2xhf_A 42 GRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEG------YHTIACIAVNDPFVMAAWGKTVDPE 101 (171)
T ss_dssp TSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTT------CCEEEEEESSCHHHHHHHHHHHCTT
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCC------CCEEEEEeCCCHHHHHHHHHhcCCC
Confidence 467777777 5799999999999999999987532 4 366666542 2345678888873
No 316
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=84.97 E-value=1.1 Score=40.51 Aligned_cols=42 Identities=7% Similarity=-0.035 Sum_probs=32.5
Q ss_pred CCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEec
Q 010286 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC 112 (513)
Q Consensus 65 ~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc 112 (513)
...+||+|...-||+|+++.|.+.++-+++. +++|.+.--+.
T Consensus 14 a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~------~g~v~~v~r~~ 55 (182)
T 3gn3_A 14 GPRLFEVFLEPTCPFSVKAFFKLDDLLAQAG------EDNVTVRIRLQ 55 (182)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHHHHHHHHC------TTTEEEEEEEC
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHHHhC------CCCEEEEEEEc
Confidence 3567999999999999999999988766652 14577776663
No 317
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=83.58 E-value=1.1 Score=41.18 Aligned_cols=47 Identities=9% Similarity=0.162 Sum_probs=36.0
Q ss_pred hcHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 116 INTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 116 ~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
++.+.++++||.++||++++.+|+. +..+.|..+.+.|.+.|++.+.
T Consensus 164 ~~~~~a~~~gv~g~Pt~~i~~~G~~-------------~~~~~G~~~~~~l~~~l~~~~~ 210 (216)
T 2in3_A 164 AGFQRVAQWGISGFPALVVESGTDR-------------YLITTGYRPIEALRQLLDTWLQ 210 (216)
T ss_dssp HHHHHHHHTTCCSSSEEEEEETTEE-------------EEEESSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcccceEEEEECCEE-------------EEeccCCCCHHHHHHHHHHHHH
Confidence 3566788999999999998777642 1235678889999999987664
No 318
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=81.36 E-value=1.1 Score=45.42 Aligned_cols=67 Identities=12% Similarity=0.186 Sum_probs=39.0
Q ss_pred HHHHHhcCCCCeEEEEEecCCCHHHhhhhH-HHHHHHHHhCCCCCCCCCeEEEEEEecc---chhcHHHHHHCCCCccce
Q 010286 56 FDAVLRDTPATYAVVEFFANWCPACRNYKP-QYEKVARLFNGPNAAHPGIILMTRVDCA---LKINTNLCDKFSVGHYPM 131 (513)
Q Consensus 56 f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P-~~~~lA~~~~~~~~~~~~~v~~~~VDc~---~d~n~~lc~~f~I~~~PT 131 (513)
+++++... . ++.|..+|||+|++..- .++++.-.+ ..+.+..+|-. .+....+.+..|.+.+|+
T Consensus 254 V~~lI~~~---~-VvVYsk~~CPyC~~Ak~~LL~~~gV~y--------~eidVlEld~~~~~~e~~~~L~~~tG~~TVPq 321 (362)
T 2jad_A 254 VKDLIAEN---E-IFVASKTYCPYSHAALNTLFEKLKVPR--------SKVLVLQLNDMKEGADIQAALYEINGQRTVPN 321 (362)
T ss_dssp HHHHHHTC---S-EEEEECTTCHHHHHHHHHHHTTTCCCT--------TTEEEEEGGGSTTHHHHHHHHHHHHCCCSSCE
T ss_pred HHHHhccC---C-EEEEEcCCCcchHHHHHHHHHHcCCCc--------ceEEEEEeccccCCHHHHHHHHHHHCCCCcCE
Confidence 44455543 2 67799999999998654 344332222 12455454421 111234556679999999
Q ss_pred EEE
Q 010286 132 LLW 134 (513)
Q Consensus 132 l~~ 134 (513)
+++
T Consensus 322 VFI 324 (362)
T 2jad_A 322 IYI 324 (362)
T ss_dssp EEE
T ss_pred EEE
Confidence 865
No 319
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=75.12 E-value=2.4 Score=38.81 Aligned_cols=46 Identities=17% Similarity=0.312 Sum_probs=34.0
Q ss_pred cHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhcc
Q 010286 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (513)
Q Consensus 117 n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~ 175 (513)
+.+.++++||.|+||+++..+|+.. ....|..+.+.+.+.|++.+.
T Consensus 158 ~~~~a~~~gv~g~Pt~~v~~~~~~~-------------~~~~g~~~~e~~~~~i~~~~~ 203 (208)
T 3kzq_A 158 QLSLAKSLGVNSYPSLVLQINDAYF-------------PIEVDYLSTEPTLKLIRERII 203 (208)
T ss_dssp HHHHHHHTTCCSSSEEEEEETTEEE-------------EECCCSSCSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccEEEEEECCEEE-------------EeeCCCCCHHHHHHHHHHHHh
Confidence 4567789999999999987655322 224567788889888887764
No 320
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=74.67 E-value=2.9 Score=28.76 Aligned_cols=30 Identities=17% Similarity=0.192 Sum_probs=17.1
Q ss_pred eeHHHHHHHHHHHhhhhHHHHHHHHHhhhc
Q 010286 477 VPVGAALAIALASCAFGALACYWRSQQKNR 506 (513)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (513)
+-.|...++++.....+++.+|||....++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 334444456666666667778885544433
No 321
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=73.48 E-value=2.4 Score=45.52 Aligned_cols=64 Identities=16% Similarity=0.254 Sum_probs=41.6
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhc-----HHHHHHCCCCc
Q 010286 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSVGH 128 (513)
Q Consensus 54 ~~f~~~l~~~~~~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n-----~~lc~~f~I~~ 128 (513)
+.+++.+... + ++.|..+|||+|++....+++.. +.+-.+|++.+.+ ..+.+..+...
T Consensus 9 ~~v~~~i~~~--~--v~vy~~~~Cp~C~~~k~~L~~~~-------------i~~~~~dv~~~~~~~~~~~~l~~~~g~~t 71 (598)
T 2x8g_A 9 QWLRKTVDSA--A--VILFSKTTCPYCKKVKDVLAEAK-------------IKHATIELDQLSNGSAIQKCLASFSKIET 71 (598)
T ss_dssp HHHHHHHHHC--S--EEEEECTTCHHHHHHHHHHHHTT-------------CCCEEEEGGGSTTHHHHHHHTHHHHSCCC
T ss_pred HHHHHHhccC--C--EEEEECCCChhHHHHHHHHHHCC-------------CCcEEEEcccCcchHHHHHHHHHHhCCce
Confidence 4566677653 2 68899999999999888877542 2234556543211 23444568889
Q ss_pred cceEEE
Q 010286 129 YPMLLW 134 (513)
Q Consensus 129 ~PTl~~ 134 (513)
+|.+++
T Consensus 72 vP~v~i 77 (598)
T 2x8g_A 72 VPQMFV 77 (598)
T ss_dssp SCEEEE
T ss_pred eCEEEE
Confidence 998854
No 322
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=73.30 E-value=2.2 Score=29.30 Aligned_cols=24 Identities=17% Similarity=0.126 Sum_probs=14.1
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHh
Q 010286 480 GAALAIALASCAFGALACYWRSQQ 503 (513)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~ 503 (513)
|...++++.....++..+|||..+
T Consensus 15 gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 15 GVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eehHHHHHHHHHHHHHHHHhhhhh
Confidence 333346666666667778885443
No 323
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=72.73 E-value=5.2 Score=33.78 Aligned_cols=58 Identities=12% Similarity=0.002 Sum_probs=34.4
Q ss_pred EEEEEecCCCHHHhhhhHH--HHHHHHHhCCCCCCCCCeEEEEEEeccch-h-cHHHHHHC--------CCCccceEEE
Q 010286 68 AVVEFFANWCPACRNYKPQ--YEKVARLFNGPNAAHPGIILMTRVDCALK-I-NTNLCDKF--------SVGHYPMLLW 134 (513)
Q Consensus 68 vLV~FyA~WCg~Ck~~~P~--~~~lA~~~~~~~~~~~~~v~~~~VDc~~d-~-n~~lc~~f--------~I~~~PTl~~ 134 (513)
+++.|+++.||.|+-..-- .+.+-+. ..|.+-.+|++.+ + -.++.++. |.+.+|.|++
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~~---------kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi 70 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLEA---------NKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFN 70 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHHH---------TTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEE
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHHH---------CCCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEEE
Confidence 3677889999999532211 1222222 1377888888532 2 23455676 7778887765
No 324
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=65.11 E-value=5.1 Score=35.98 Aligned_cols=44 Identities=11% Similarity=0.108 Sum_probs=31.5
Q ss_pred hcHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 116 INTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 116 ~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
.+..+++++||+|+||+++ +|+. +....|..+.+.+.+.|+..+
T Consensus 140 ~~~~~a~~~gv~GtPtfvv--ng~~-------------~v~~~Ga~~~e~~~~~i~~ll 183 (185)
T 3feu_A 140 NAKMLSEKSGISSVPTFVV--NGKY-------------NVLIGGHDDPKQIADTIRYLL 183 (185)
T ss_dssp HHHHHHHHHTCCSSSEEEE--TTTE-------------EECGGGCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCEEEE--CCEE-------------EEecCCCCCHHHHHHHHHHHH
Confidence 4566788999999999987 3321 112367788888888887654
No 325
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=62.67 E-value=6 Score=35.60 Aligned_cols=39 Identities=8% Similarity=0.073 Sum_probs=28.0
Q ss_pred cHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHH
Q 010286 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 170 (513)
Q Consensus 117 n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i 170 (513)
+.+.++++||+++||+++ +|+.. ..+.|..+.+++.++|
T Consensus 143 ~~~~a~~~GV~gtPtf~i--ng~~~-------------~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 143 HTKYARQNGIHVSPTFMI--NGLVQ-------------PGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHHHTCCSSSEEEE--TTEEC-------------TTCCTTSCHHHHHHHH
T ss_pred HHHHHHHCCCCccCEEEE--CCEEc-------------cCCCCCCCHHHHHHHh
Confidence 345788899999999987 34322 2356778888888776
No 326
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=59.85 E-value=7.4 Score=35.22 Aligned_cols=42 Identities=10% Similarity=-0.068 Sum_probs=31.5
Q ss_pred cHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 117 n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
+.+.++++||.++||+++ +|+ .+.|....+.|.+.|.+....
T Consensus 156 ~~~~a~~~Gv~G~Ptfvi--~g~----------------~~~G~~~~~~l~~~l~~~~~~ 197 (203)
T 2imf_A 156 QTHAAIERKVFGVPTMFL--GDE----------------MWWGNDRLFMLESAMGRLCRQ 197 (203)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTE----------------EEESGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCcCCEEEE--CCE----------------EEECCCCHHHHHHHHhccccc
Confidence 456788999999999987 331 356777888888888776543
No 327
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=59.20 E-value=72 Score=26.00 Aligned_cols=84 Identities=12% Similarity=0.188 Sum_probs=61.5
Q ss_pred EEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccchhcHHHHHHCCCCccceEEEecCCcccCCCCCC
Q 010286 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEP 147 (513)
Q Consensus 68 vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~ 147 (513)
....|.|.--+..++-.-.+.++-+.+... +...+-.||. -+++++++.++|-.+||++-..|.
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~-----~~y~LeVIDv--~eqPeLAE~~~IvATPTLIK~~P~--------- 76 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEAT-----VPISLQVINV--ADQPQLVEYYRLVVTPALVKIGPG--------- 76 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCS-----SCEEEEEEET--TTCHHHHHHTTCCSSSEEEEEESS---------
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccC-----CceEEEEeec--ccCHHHHhHcCeeeccHhhccCCC---------
Confidence 344677888888888888888876666521 4588888997 479999999999999998754331
Q ss_pred ccccchhhhccCcCCHHHHHHHHHH
Q 010286 148 NQEKKEIRALEDWQTADGLLTWINK 172 (513)
Q Consensus 148 ~~~~~~v~~~~g~~~~e~L~~~i~~ 172 (513)
...++.|..-.+.|..|.-+
T Consensus 77 -----P~rriiGd~i~~ql~~wwpr 96 (105)
T 1t4y_A 77 -----SRQVLSGIDLTDQLANQLPQ 96 (105)
T ss_dssp -----SCEEEESSCHHHHHHHHHHH
T ss_pred -----CceEEeChHHHHHHHHHhHH
Confidence 22456776667777777644
No 328
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=54.87 E-value=9.6 Score=31.92 Aligned_cols=66 Identities=14% Similarity=0.132 Sum_probs=38.4
Q ss_pred cccHHHHHhcCCCCeEEEEEec-----CCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEeccch--hcHHHHHHCC
Q 010286 53 ATNFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--INTNLCDKFS 125 (513)
Q Consensus 53 ~~~f~~~l~~~~~~~vLV~FyA-----~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--~n~~lc~~f~ 125 (513)
.+..++.|.++ + +|.|-- |.||.|++..-.+... . ...+..+|...+ ....+.+.-+
T Consensus 10 ~e~i~~~i~~~---~-VvvF~Kgt~~~P~C~fc~~ak~lL~~~----g--------v~~~~~~~v~~~~~~r~~l~~~sg 73 (118)
T 2wul_A 10 AEQLDALVKKD---K-VVVFLKGTPEQPQCGFSNAVVQILRLH----G--------VRDYAAYNVLDDPELRQGIKDYSN 73 (118)
T ss_dssp HHHHHHHHHHS---S-EEEEESBCSSSBSSHHHHHHHHHHHHT----T--------CCSCEEEETTSCHHHHHHHHHHHT
T ss_pred HHHHHHHHhcC---C-EEEEEcCCCCCCCCHHHHHHHHHHHHh----C--------CcCeEeecccCCHHHHHHHHHhcc
Confidence 34567778774 2 566743 6799999987666542 1 112445565322 2233444556
Q ss_pred CCccceEEE
Q 010286 126 VGHYPMLLW 134 (513)
Q Consensus 126 I~~~PTl~~ 134 (513)
-+.+|.+++
T Consensus 74 ~~TvPqIFI 82 (118)
T 2wul_A 74 WPTIPQVYL 82 (118)
T ss_dssp CCSSCEEEE
T ss_pred CCCCCeEeE
Confidence 677888765
No 329
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=47.93 E-value=17 Score=34.03 Aligned_cols=43 Identities=7% Similarity=0.095 Sum_probs=32.3
Q ss_pred cHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhccc
Q 010286 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (513)
Q Consensus 117 n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l~~ 176 (513)
+.+.++++||.++||+++ +|+ ..+.|..+.+.|.+.|++.+..
T Consensus 172 ~~~~a~~~Gv~GvPtfvv--~g~---------------~~v~Ga~~~e~~~~~i~~~~~~ 214 (239)
T 3gl5_A 172 DEREAAQLGATGVPFFVL--DRA---------------YGVSGAQPAEVFTQALTQAWGE 214 (239)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTT---------------EEEESSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCCeeCeEEE--CCc---------------EeecCCCCHHHHHHHHHHHHhh
Confidence 345678899999999987 221 2346888999999999887653
No 330
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=47.40 E-value=7.2 Score=34.61 Aligned_cols=43 Identities=12% Similarity=0.130 Sum_probs=29.7
Q ss_pred cHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHHhc
Q 010286 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (513)
Q Consensus 117 n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~~l 174 (513)
+.+.++++||.++||+++ +|+.. ....|..+.+.+.+.|++.+
T Consensus 151 ~~~~a~~~gv~gtPt~~i--ng~~~-------------~~~~g~~~~~~l~~~i~~~l 193 (195)
T 3c7m_A 151 WKASYDVAKIQGVPAYVV--NGKYL-------------IYTKSIKSIDAMADLIRELA 193 (195)
T ss_dssp GGGHHHHHHHHCSSEEEE--TTTEE-------------ECGGGCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEE--CCEEE-------------eccCCCCCHHHHHHHHHHHH
Confidence 455788899999999866 33210 11236678899999888765
No 331
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=42.02 E-value=15 Score=29.30 Aligned_cols=17 Identities=24% Similarity=0.552 Sum_probs=15.4
Q ss_pred CChHHHHHHHHHHhCCC
Q 010286 429 WDQDEVFKFLTNYYGNT 445 (513)
Q Consensus 429 w~e~~V~~fL~~~Y~~~ 445 (513)
-..++|..||+..||.-
T Consensus 57 ~Sd~eI~~~mv~RYGdf 73 (90)
T 2kw0_A 57 KSKKEIVDYMVARYGNF 73 (90)
T ss_dssp CCHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHhcCCe
Confidence 56899999999999986
No 332
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=41.76 E-value=14 Score=28.95 Aligned_cols=17 Identities=18% Similarity=0.501 Sum_probs=15.2
Q ss_pred CChHHHHHHHHHHhCCC
Q 010286 429 WDQDEVFKFLTNYYGNT 445 (513)
Q Consensus 429 w~e~~V~~fL~~~Y~~~ 445 (513)
-..++|..||...||.-
T Consensus 60 ~sd~eI~~~~v~RYG~f 76 (84)
T 2hl7_A 60 KSDGEIVDYMVARYGDF 76 (84)
T ss_dssp CCHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHhcCCe
Confidence 56899999999999985
No 333
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=41.23 E-value=18 Score=29.58 Aligned_cols=21 Identities=10% Similarity=0.186 Sum_probs=16.8
Q ss_pred EEEEecCCCHHHhhhhHHHHH
Q 010286 69 VVEFFANWCPACRNYKPQYEK 89 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~ 89 (513)
++.|+.|+|+.|++..-.+++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~ 22 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE 22 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 456889999999998766664
No 334
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=41.19 E-value=18 Score=30.46 Aligned_cols=21 Identities=24% Similarity=0.524 Sum_probs=17.4
Q ss_pred EEEEecCCCHHHhhhhHHHHH
Q 010286 69 VVEFFANWCPACRNYKPQYEK 89 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~ 89 (513)
++.|+.++|+.|++....+++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~ 23 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE 23 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHH
Confidence 567889999999998777765
No 335
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=39.46 E-value=22 Score=32.06 Aligned_cols=38 Identities=13% Similarity=0.233 Sum_probs=27.7
Q ss_pred cHHHHHHCCCCccceEEEecCCcccCCCCCCccccchhhhccCcCCHHHHHHHHHH
Q 010286 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (513)
Q Consensus 117 n~~lc~~f~I~~~PTl~~f~~g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i~~ 172 (513)
+.+.+++.||.|+||+++ +| +.+.|....+.|.++|.+
T Consensus 162 ~~~~a~~~Gv~GvPtfvv--~g----------------~~~~G~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 162 IGEDAVARGIFGSPFFLV--DD----------------EPFWGWDRMEMMAEWIRT 199 (202)
T ss_dssp HHHHHHHTTCCSSSEEEE--TT----------------EEEESGGGHHHHHHHHHT
T ss_pred HHHHHHHCCCCcCCEEEE--CC----------------EEEecCCCHHHHHHHHhc
Confidence 456678899999999987 22 235677777777777753
No 336
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=37.14 E-value=23 Score=29.26 Aligned_cols=21 Identities=14% Similarity=0.165 Sum_probs=17.2
Q ss_pred EEEEecCCCHHHhhhhHHHHH
Q 010286 69 VVEFFANWCPACRNYKPQYEK 89 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~ 89 (513)
++.|+.|+|+.|++..-.+++
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~ 27 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED 27 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 566789999999998777665
No 337
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=35.07 E-value=23 Score=29.53 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=28.5
Q ss_pred CeEEEEEecCCCHHHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEEec
Q 010286 66 TYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC 112 (513)
Q Consensus 66 ~~vLV~FyA~WCg~Ck~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc 112 (513)
+.+|+.|--|.|+-|+.....++++..+ ..+..||.
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~lede-----------Y~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKSE-----------YDILHVDI 37 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTTT-----------EEEEEEEC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhcc-----------ccEEEEEe
Confidence 4579999999999999988887665444 45788885
No 338
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=32.69 E-value=39 Score=30.35 Aligned_cols=28 Identities=25% Similarity=0.490 Sum_probs=25.4
Q ss_pred EEEEEecCCCHHHhhhhHHHHHHHHHhC
Q 010286 68 AVVEFFANWCPACRNYKPQYEKVARLFN 95 (513)
Q Consensus 68 vLV~FyA~WCg~Ck~~~P~~~~lA~~~~ 95 (513)
.|..|+-+-||+|-...|.++++.+.+.
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~ 31 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLP 31 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSC
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCC
Confidence 4788889999999999999999999984
No 339
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=31.84 E-value=32 Score=28.47 Aligned_cols=21 Identities=24% Similarity=0.602 Sum_probs=16.7
Q ss_pred EEEEecCCCHHHhhhhHHHHH
Q 010286 69 VVEFFANWCPACRNYKPQYEK 89 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~ 89 (513)
+..|+.|+|+.|++..-.+++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~ 22 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR 22 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHH
Confidence 456789999999998766654
No 340
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=36.21 E-value=11 Score=20.90 Aligned_cols=13 Identities=46% Similarity=1.122 Sum_probs=10.7
Q ss_pred cCChHHHHHHHHH
Q 010286 347 FVCEECRQHFYQM 359 (513)
Q Consensus 347 f~C~~C~~hf~~~ 359 (513)
|.|++|.+.|...
T Consensus 3 ~~C~~C~k~f~~~ 15 (26)
T 2lvu_A 3 YVCERCGKRFVQS 15 (26)
Confidence 7899999999653
No 341
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=29.78 E-value=31 Score=31.17 Aligned_cols=19 Identities=5% Similarity=0.120 Sum_probs=15.9
Q ss_pred hcHHHHHHCCCCccceEEE
Q 010286 116 INTNLCDKFSVGHYPMLLW 134 (513)
Q Consensus 116 ~n~~lc~~f~I~~~PTl~~ 134 (513)
.+...++.+||+++||+++
T Consensus 38 ~~~~~a~~~gi~gvP~fvi 56 (197)
T 1un2_A 38 QQEKAAADVQLRGVPAMFV 56 (197)
T ss_dssp HHHHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHcCCCcCCEEEE
Confidence 3556789999999999976
No 342
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=28.89 E-value=50 Score=29.55 Aligned_cols=27 Identities=15% Similarity=0.302 Sum_probs=23.4
Q ss_pred eEEEEEecCCCHHHhhhhHHHHHHHHH
Q 010286 67 YAVVEFFANWCPACRNYKPQYEKVARL 93 (513)
Q Consensus 67 ~vLV~FyA~WCg~Ck~~~P~~~~lA~~ 93 (513)
..|+.|+-.-||+|..+.+.++++++.
T Consensus 8 ~~I~~f~D~~CP~C~~~~~~~~~l~~~ 34 (216)
T 2in3_A 8 PVLWYIADPMCSWCWGFAPVIENIRQE 34 (216)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred eeEEEEECCCCchhhcchHHHHHHHhc
Confidence 357888889999999999999999883
No 343
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=28.44 E-value=8.9 Score=25.50 Aligned_cols=18 Identities=22% Similarity=0.303 Sum_probs=10.9
Q ss_pred ccceeeeHHHHHHHHHHH
Q 010286 472 TNAVVVPVGAALAIALAS 489 (513)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~ 489 (513)
.+.+.+.+|+++|+++..
T Consensus 10 ~~~~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 10 SGNLAVIGGVAVGVVLLL 27 (41)
T ss_dssp CSSTHHHHHHHHHHHHHH
T ss_pred CceEEEEeehhHHHHHHH
Confidence 344456667777776644
No 344
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=25.72 E-value=47 Score=27.46 Aligned_cols=21 Identities=19% Similarity=0.441 Sum_probs=16.7
Q ss_pred EEEEecCCCHHHhhhhHHHHH
Q 010286 69 VVEFFANWCPACRNYKPQYEK 89 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~ 89 (513)
+..|+.|+|+.|++..-.+++
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~ 25 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDD 25 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHH
Confidence 556779999999998766664
No 345
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=25.68 E-value=39 Score=25.49 Aligned_cols=25 Identities=36% Similarity=0.317 Sum_probs=11.1
Q ss_pred cccccccccceeeeHHHHHHHHHHHhhh
Q 010286 465 LEDLVVSTNAVVVPVGAALAIALASCAF 492 (513)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (513)
+.|++.++- ||+|+..+ ||+|..+.
T Consensus 5 i~dhspttg--vvtv~vil-iavaalg~ 29 (90)
T 1zza_A 5 IMDHSPTTG--VVTVIVIL-IAIAALGA 29 (90)
T ss_dssp SCTTTTHHH--HHHHHHHH-HHHHHHHH
T ss_pred eeccCCCcc--eEEehhHH-HHHHHHHH
Confidence 455554433 34554433 44444433
No 346
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=25.38 E-value=35 Score=21.86 Aligned_cols=23 Identities=26% Similarity=0.625 Sum_probs=12.3
Q ss_pred eeeHHHHHHHHHHHhhhhHHHHHHHHH
Q 010286 476 VVPVGAALAIALASCAFGALACYWRSQ 502 (513)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (513)
++-+|.+|-..+ .|.-.+|||-.
T Consensus 11 t~i~gl~vif~~----lg~tflywrgr 33 (40)
T 2l9u_A 11 TVIAGLVVIFMM----LGGTFLYWRGR 33 (40)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----hCceeEEEccc
Confidence 334455554444 44455899753
No 347
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=23.05 E-value=64 Score=29.39 Aligned_cols=40 Identities=13% Similarity=-0.000 Sum_probs=0.0
Q ss_pred hhcHHHHHHCCCCccceEEEecC--CcccCCCCCCccccchhhhccCcCCHHHHHHHH
Q 010286 115 KINTNLCDKFSVGHYPMLLWGSP--SKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 170 (513)
Q Consensus 115 d~n~~lc~~f~I~~~PTl~~f~~--g~~~~~~~~~~~~~~~v~~~~g~~~~e~L~~~i 170 (513)
..+.+.++++||.|+||+++-.+ | ..+.|....+.+.+.|
T Consensus 169 ~~~~~~a~~~gv~G~Ptfvv~~~g~~----------------~~~~G~~~~~~l~~~l 210 (226)
T 1r4w_A 169 RETTGAACKYGAFGLPTTVAHVDGKT----------------YMLFGSDRMELLAYLL 210 (226)
T ss_dssp HHHHHHHHHTTCCSSCEEEEEETTEE----------------EEEESTTCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCEEEEeCCCCc----------------CceeCCCcHHHHHHHh
No 348
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=28.12 E-value=18 Score=20.41 Aligned_cols=13 Identities=31% Similarity=0.606 Sum_probs=10.6
Q ss_pred cCChHHHHHHHHH
Q 010286 347 FVCEECRQHFYQM 359 (513)
Q Consensus 347 f~C~~C~~hf~~~ 359 (513)
|.|+.|.+.|...
T Consensus 3 ~~C~~C~k~f~~~ 15 (29)
T 2lvt_A 3 CQCVMCGKAFTQA 15 (29)
Confidence 7899999998653
No 349
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=21.86 E-value=51 Score=27.22 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=16.6
Q ss_pred EEEEecCCCHHHhhhhHHHHH
Q 010286 69 VVEFFANWCPACRNYKPQYEK 89 (513)
Q Consensus 69 LV~FyA~WCg~Ck~~~P~~~~ 89 (513)
+..|+.|+|+.|++..-.+++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~ 26 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE 26 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 466789999999998766654
No 350
>3irb_A Uncharacterized protein from DUF35 family; 13815350, protein with unknown function from DUF35 family, S genomics; 1.80A {Sulfolobus solfataricus}
Probab=21.37 E-value=15 Score=31.92 Aligned_cols=17 Identities=24% Similarity=0.782 Sum_probs=15.2
Q ss_pred CCCCCCCCCChhhhccC
Q 010286 401 KIIWPPKQLCSSCYRSH 417 (513)
Q Consensus 401 k~~~P~~~~Cp~C~~~~ 417 (513)
+.+||+...||.|...+
T Consensus 55 ~~~~PPr~~Cp~C~s~~ 71 (145)
T 3irb_A 55 RIFVPARSYCEHCFVKI 71 (145)
T ss_dssp CEEESCCSEETTTTEEC
T ss_pred cEEcCchhhCcCCCCCc
Confidence 79999999999999764
No 351
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=26.71 E-value=20 Score=20.24 Aligned_cols=13 Identities=31% Similarity=0.940 Sum_probs=10.7
Q ss_pred cCChHHHHHHHHH
Q 010286 347 FVCEECRQHFYQM 359 (513)
Q Consensus 347 f~C~~C~~hf~~~ 359 (513)
|.|+.|.+.|...
T Consensus 4 ~~C~~C~k~f~~~ 16 (30)
T 2lvr_A 4 YVCIHCQRQFADP 16 (30)
Confidence 7899999998653
Done!