Query 010291
Match_columns 513
No_of_seqs 511 out of 2886
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 03:36:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010291.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010291hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ul1_B Importin subunit alpha- 100.0 2E-32 6.7E-37 277.2 26.7 315 2-316 99-432 (510)
2 3nmz_A APC variant protein; pr 100.0 2.1E-33 7E-38 275.0 16.2 314 2-316 69-452 (458)
3 3tpo_A Importin subunit alpha- 100.0 1.3E-31 4.3E-36 272.8 26.0 314 2-315 118-450 (529)
4 1xm9_A Plakophilin 1; armadill 100.0 5.2E-31 1.8E-35 262.7 22.7 315 3-319 2-454 (457)
5 3nmw_A APC variant protein; AR 100.0 1.8E-31 6E-36 254.0 16.8 266 18-317 47-337 (354)
6 3ul1_B Importin subunit alpha- 100.0 1.7E-30 6E-35 262.9 23.3 312 4-315 58-388 (510)
7 3l6x_A Catenin delta-1; cateni 100.0 2.6E-30 8.7E-35 258.5 22.2 311 2-315 47-433 (584)
8 3hve_A Gigaxonin; ubiquitin, c 100.0 6.4E-31 2.2E-35 241.0 15.8 160 337-496 23-184 (256)
9 3tpo_A Importin subunit alpha- 100.0 1.4E-29 4.8E-34 257.8 24.4 312 4-315 77-407 (529)
10 3l6x_A Catenin delta-1; cateni 100.0 4.1E-30 1.4E-34 257.0 18.9 320 2-323 89-485 (584)
11 4b8j_A Importin subunit alpha- 100.0 2.4E-29 8.2E-34 256.9 25.0 315 2-317 116-446 (528)
12 4b8j_A Importin subunit alpha- 100.0 5.9E-29 2E-33 254.1 27.7 312 4-315 75-401 (528)
13 3htm_A Speckle-type POZ protei 100.0 1.7E-30 5.7E-35 223.6 12.6 147 337-483 26-172 (172)
14 3now_A UNC-45 protein, SD10334 100.0 1.2E-29 4.2E-34 261.9 20.3 314 2-316 420-784 (810)
15 3now_A UNC-45 protein, SD10334 100.0 9.6E-30 3.3E-34 262.7 18.9 309 5-315 379-738 (810)
16 1wa5_B Importin alpha subunit; 100.0 1.8E-28 6E-33 250.5 27.1 316 2-317 129-460 (530)
17 3i3n_A Kelch-like protein 11; 100.0 2E-30 6.8E-35 240.7 11.1 159 337-495 24-191 (279)
18 1wa5_B Importin alpha subunit; 100.0 3.8E-28 1.3E-32 248.0 28.0 314 2-315 86-413 (530)
19 2jdq_A Importin alpha-1 subuni 100.0 5.9E-28 2E-32 241.8 24.6 314 3-317 64-393 (450)
20 1xm9_A Plakophilin 1; armadill 100.0 3.3E-28 1.1E-32 242.4 20.8 271 46-317 3-363 (457)
21 3nmw_A APC variant protein; AR 100.0 2.5E-28 8.7E-33 232.2 18.4 243 2-277 72-338 (354)
22 4hxt_A De novo protein OR329; 100.0 1.7E-27 6E-32 218.9 22.9 241 3-276 2-244 (252)
23 2jdq_A Importin alpha-1 subuni 100.0 1.5E-26 5.1E-31 231.6 26.2 311 4-315 21-348 (450)
24 4db8_A Armadillo-repeat protei 99.9 1E-26 3.5E-31 213.8 21.5 238 3-273 12-251 (252)
25 4hxt_A De novo protein OR329; 99.9 7.3E-27 2.5E-31 214.7 20.0 243 45-319 2-246 (252)
26 3hqi_A Speckle-type POZ protei 99.9 1.1E-27 3.6E-32 226.5 14.6 147 337-483 166-312 (312)
27 3nmz_A APC variant protein; pr 99.9 2.7E-27 9.3E-32 231.7 17.7 242 2-276 188-453 (458)
28 1jdh_A Beta-catenin; beta-cate 99.9 9.1E-27 3.1E-31 238.2 19.2 307 2-311 100-423 (529)
29 4db8_A Armadillo-repeat protei 99.9 1.5E-26 5.1E-31 212.6 17.5 238 45-314 12-251 (252)
30 2z6h_A Catenin beta-1, beta-ca 99.9 5E-26 1.7E-30 237.5 23.3 316 2-317 97-530 (644)
31 1jdh_A Beta-catenin; beta-cate 99.9 6.3E-26 2.2E-30 231.9 21.8 312 2-315 16-340 (529)
32 2z6h_A Catenin beta-1, beta-ca 99.9 1.1E-25 3.7E-30 234.9 23.0 312 2-315 13-337 (644)
33 2z6g_A B-catenin; FULL-length, 99.9 8E-26 2.7E-30 239.5 21.2 316 2-317 233-666 (780)
34 4db6_A Armadillo repeat protei 99.9 5.8E-25 2E-29 196.0 22.2 198 2-199 11-209 (210)
35 4eoz_A Speckle-type POZ protei 99.9 1.5E-27 5.1E-32 198.8 4.3 129 337-465 17-145 (145)
36 2z6g_A B-catenin; FULL-length, 99.9 7.4E-25 2.5E-29 232.1 21.3 312 2-315 149-473 (780)
37 2vkp_A BTB/POZ domain-containi 99.9 1.7E-24 5.9E-29 170.4 10.3 104 339-443 2-109 (109)
38 3tt9_A Plakophilin-2; cell adh 99.9 2.6E-23 9E-28 183.8 17.0 196 3-200 8-230 (233)
39 4db6_A Armadillo repeat protei 99.9 8.9E-23 3E-27 181.8 19.8 199 42-273 9-209 (210)
40 2if5_A Zinc finger and BTB dom 99.9 6E-24 2E-28 170.3 9.7 103 337-439 17-119 (120)
41 1xqr_A HSPBP1 protein; armadil 99.9 3.6E-22 1.2E-26 184.8 21.6 183 18-201 55-240 (296)
42 1r29_A B-cell lymphoma 6 prote 99.9 1.8E-23 6.2E-28 169.2 10.3 105 337-442 21-126 (127)
43 2z8h_A Transcription regulator 99.9 1.2E-23 4E-28 172.7 6.3 110 337-448 28-138 (138)
44 3tt9_A Plakophilin-2; cell adh 99.9 6.4E-22 2.2E-26 174.9 17.5 196 46-274 9-230 (233)
45 2ppi_A Gigaxonin; BTB domain, 99.9 2.1E-23 7.1E-28 171.9 7.4 104 337-440 39-144 (144)
46 3b84_A Zinc finger and BTB dom 99.9 1.9E-23 6.5E-28 166.6 6.5 102 337-442 16-117 (119)
47 2yy9_A Zinc finger and BTB dom 99.9 3E-23 1E-27 169.2 6.3 106 337-446 17-122 (135)
48 1buo_A POZ domain, protein (pr 99.9 1.2E-22 4.2E-27 162.5 9.7 101 337-442 20-120 (121)
49 2vpk_A Myoneurin; transcriptio 99.9 1.1E-22 3.8E-27 161.7 8.6 100 337-440 14-115 (116)
50 1xqr_A HSPBP1 protein; armadil 99.9 1.1E-20 3.7E-25 174.9 18.8 159 2-160 80-240 (296)
51 2q81_A MIZ-1 protein; BTB/POZ 99.9 2.9E-22 9.8E-27 159.8 6.6 99 337-440 19-117 (119)
52 3opb_A SWI5-dependent HO expre 99.9 1.6E-21 5.5E-26 197.5 12.7 284 3-315 376-729 (778)
53 3ohu_A Transcription regulator 99.9 6E-23 2E-27 165.6 1.2 101 337-439 24-125 (125)
54 3ga1_A Nucleus accumbens-assoc 99.9 1.7E-22 5.8E-27 163.7 3.5 102 337-442 25-127 (129)
55 2ihc_A Transcription regulator 99.9 7.8E-23 2.7E-27 164.3 1.4 102 337-440 21-123 (124)
56 3opb_A SWI5-dependent HO expre 99.8 1.4E-19 4.9E-24 183.4 20.2 277 5-315 336-684 (778)
57 3m5b_A Zinc finger and BTB dom 99.8 3.6E-21 1.2E-25 152.5 5.7 94 339-441 24-117 (119)
58 3fkc_A Transcriptional regulat 99.8 2.4E-20 8.3E-25 147.5 8.6 92 337-433 23-115 (116)
59 1oyz_A Hypothetical protein YI 99.6 2.7E-14 9.1E-19 132.8 21.6 226 3-313 23-249 (280)
60 2ast_A S-phase kinase-associat 99.6 1.5E-14 5.2E-19 120.3 10.8 111 348-459 3-145 (159)
61 3grl_A General vesicular trans 99.6 1.9E-13 6.6E-18 135.1 19.4 289 2-316 59-396 (651)
62 3ltm_A Alpha-REP4; protein eng 99.5 6.7E-13 2.3E-17 117.7 18.6 188 3-276 19-206 (211)
63 3grl_A General vesicular trans 99.5 4.6E-13 1.6E-17 132.5 18.7 293 3-319 122-454 (651)
64 3ltj_A Alpharep-4; protein eng 99.5 7.4E-13 2.5E-17 116.4 18.0 183 4-272 15-197 (201)
65 4fdd_A Transportin-1; heat rep 99.5 4.1E-13 1.4E-17 144.8 17.5 305 6-316 93-431 (852)
66 3ltm_A Alpha-REP4; protein eng 99.5 5.4E-13 1.8E-17 118.3 15.3 189 44-317 18-206 (211)
67 1oyz_A Hypothetical protein YI 99.5 3.6E-12 1.2E-16 118.3 21.3 222 4-310 55-278 (280)
68 3ltj_A Alpharep-4; protein eng 99.4 1.8E-12 6.3E-17 113.8 14.5 186 44-314 13-198 (201)
69 1b3u_A Protein (protein phosph 99.4 3.5E-12 1.2E-16 131.7 15.8 298 5-315 166-471 (588)
70 1ibr_B P95, importin beta-1 su 99.4 4.8E-12 1.7E-16 126.4 16.3 278 3-317 128-440 (462)
71 2vgl_B AP-2 complex subunit be 99.4 7.7E-12 2.6E-16 128.6 16.5 260 3-316 49-313 (591)
72 4ajy_C Transcription elongatio 99.4 2E-12 7E-17 97.5 8.3 79 348-427 4-96 (97)
73 1b3u_A Protein (protein phosph 99.4 5.4E-12 1.9E-16 130.2 14.4 298 4-313 282-586 (588)
74 4fdd_A Transportin-1; heat rep 99.3 4E-12 1.4E-16 137.1 13.5 275 4-317 175-474 (852)
75 2vgl_B AP-2 complex subunit be 99.3 4.1E-12 1.4E-16 130.6 11.9 182 4-199 87-268 (591)
76 1fs1_B SKP1, cyclin A/CDK2-ass 99.2 2.3E-11 7.8E-16 98.6 8.4 98 348-450 4-128 (141)
77 1w63_A Adapter-related protein 99.2 5.3E-10 1.8E-14 115.3 18.1 285 4-314 71-379 (618)
78 2p1m_A SKP1-like protein 1A; F 99.1 6.7E-12 2.3E-16 104.2 1.4 108 348-459 6-144 (160)
79 1w63_A Adapter-related protein 99.1 1.8E-09 6.3E-14 111.3 19.7 282 5-315 109-415 (618)
80 4gmo_A Putative uncharacterize 99.1 4E-10 1.4E-14 117.4 13.6 193 4-198 35-257 (684)
81 1qgr_A Protein (importin beta 99.1 1.2E-09 4.2E-14 118.2 15.9 277 3-317 128-440 (876)
82 1u6g_C TIP120 protein, CAND1; 99.0 2.9E-09 1E-13 119.4 17.7 272 5-316 8-286 (1230)
83 2bpt_A Importin beta-1 subunit 99.0 2E-09 6.7E-14 116.3 15.5 307 5-315 371-712 (861)
84 2vgl_A Adaptor protein complex 99.0 2.5E-08 8.6E-13 102.5 22.7 295 2-315 73-399 (621)
85 2bpt_A Importin beta-1 subunit 99.0 2.4E-09 8E-14 115.7 15.5 303 5-316 326-670 (861)
86 4gmo_A Putative uncharacterize 99.0 3.2E-09 1.1E-13 110.6 14.0 158 45-203 34-218 (684)
87 1qgr_A Protein (importin beta 99.0 1E-08 3.5E-13 110.9 18.0 274 5-316 174-481 (876)
88 3b2a_A TON_1937, putative unch 98.9 5.6E-08 1.9E-12 82.6 17.2 187 4-201 34-220 (265)
89 1ibr_B P95, importin beta-1 su 98.9 2.1E-09 7E-14 107.2 8.1 283 7-315 94-396 (462)
90 2qk2_A LP04448P; mini spindles 98.8 5.4E-08 1.8E-12 87.8 12.6 185 6-199 18-205 (242)
91 1hv2_A Elongin C, ELC1; protei 98.8 1.9E-08 6.3E-13 75.6 7.8 79 348-428 6-99 (99)
92 3b2a_A TON_1937, putative unch 98.8 1.5E-07 5.2E-12 80.0 13.8 216 45-309 33-256 (265)
93 2eqx_A Kelch repeat and BTB do 98.7 7.9E-09 2.7E-13 79.1 4.4 57 440-496 5-61 (105)
94 2vgl_A Adaptor protein complex 98.7 1.9E-07 6.6E-12 95.9 15.5 106 5-120 113-220 (621)
95 2fnj_C Transcription elongatio 98.7 1.6E-08 5.6E-13 75.5 5.5 80 348-428 3-96 (96)
96 3tjz_B Coatomer subunit gamma; 98.7 2.3E-07 7.7E-12 87.0 14.5 272 5-311 70-350 (355)
97 3tjz_B Coatomer subunit gamma; 98.7 6.7E-07 2.3E-11 83.8 17.1 266 19-315 44-317 (355)
98 2db0_A 253AA long hypothetical 98.7 8.8E-06 3E-10 66.3 20.4 181 4-203 33-214 (253)
99 3v7d_A Suppressor of kinetocho 98.6 1.5E-07 5E-12 78.5 10.2 109 347-456 8-149 (169)
100 1te4_A Conserved protein MTH18 98.6 3.1E-09 1.1E-13 85.8 -0.5 120 3-156 12-131 (131)
101 2qk2_A LP04448P; mini spindles 98.6 7.9E-08 2.7E-12 86.7 8.6 187 89-317 17-208 (242)
102 1ho8_A Vacuolar ATP synthase s 98.6 1.1E-06 3.8E-11 84.1 16.0 290 15-316 137-478 (480)
103 2qk1_A Protein STU2; STU2P, XM 98.6 1.7E-07 5.9E-12 84.4 9.6 191 7-199 20-220 (249)
104 2db0_A 253AA long hypothetical 98.6 2.4E-06 8.3E-11 69.5 14.7 216 42-314 29-246 (253)
105 1u6g_C TIP120 protein, CAND1; 98.6 2.3E-06 8E-11 95.9 19.9 276 4-317 375-682 (1230)
106 4ady_A RPN2, 26S proteasome re 98.5 2.4E-06 8.1E-11 89.2 18.0 235 5-315 431-677 (963)
107 1te4_A Conserved protein MTH18 98.5 1.2E-08 4E-13 82.4 0.2 121 44-197 11-131 (131)
108 3drz_A BTB/POZ domain-containi 98.5 3.8E-07 1.3E-11 69.7 8.4 96 345-441 5-106 (107)
109 4ady_A RPN2, 26S proteasome re 98.4 2.2E-05 7.5E-10 82.1 20.9 243 5-317 474-722 (963)
110 1vcb_B Protein (elongin C); tu 98.4 6.8E-07 2.3E-11 68.5 6.8 81 347-428 18-112 (112)
111 2qk1_A Protein STU2; STU2P, XM 98.3 1.2E-06 4E-11 78.9 7.7 195 91-317 20-223 (249)
112 3dad_A FH1/FH2 domain-containi 98.2 6E-05 2.1E-09 68.6 16.7 156 6-162 121-290 (339)
113 1ho8_A Vacuolar ATP synthase s 98.0 0.00012 4.2E-09 70.2 15.8 229 8-272 172-475 (480)
114 3dad_A FH1/FH2 domain-containi 97.8 0.00074 2.5E-08 61.6 16.0 151 47-198 120-285 (339)
115 2iw3_A Elongation factor 3A; a 97.8 0.00062 2.1E-08 72.1 17.8 257 5-314 56-324 (986)
116 3drx_A BTB/POZ domain-containi 97.6 7.4E-05 2.5E-09 62.9 5.6 98 343-441 9-112 (202)
117 3oc3_A Helicase MOT1, MOT1; re 97.5 0.00018 6.1E-09 69.5 7.8 241 5-309 176-431 (800)
118 4ffb_C Protein STU2; tubulin f 97.5 0.0029 1E-07 57.7 15.9 186 8-199 14-212 (278)
119 1wa5_C Importin alpha RE-expor 97.4 0.004 1.4E-07 67.7 18.4 304 7-315 89-488 (960)
120 1lrv_A LRV, leucine-rich repea 97.4 0.00014 4.9E-09 64.4 5.4 185 10-309 57-241 (244)
121 2fv2_A RCD1 required for cell 97.3 0.0043 1.5E-07 53.9 13.4 172 21-197 74-266 (268)
122 2of3_A ZYG-9; multifunctional 97.3 0.023 8E-07 50.6 18.1 178 6-199 49-236 (266)
123 2iw3_A Elongation factor 3A; a 97.2 0.01 3.6E-07 63.0 17.5 181 4-199 96-280 (986)
124 1upk_A MO25 protein; transfera 96.9 0.063 2.2E-06 48.9 17.4 198 3-203 78-287 (341)
125 1wa5_C Importin alpha RE-expor 96.9 0.032 1.1E-06 60.6 18.4 255 18-316 376-672 (960)
126 1upk_A MO25 protein; transfera 96.9 0.0093 3.2E-07 54.3 11.3 204 81-316 72-285 (341)
127 2fv2_A RCD1 required for cell 96.8 0.023 7.9E-07 49.4 12.5 192 16-208 14-233 (268)
128 4ffb_C Protein STU2; tubulin f 96.7 0.093 3.2E-06 47.6 17.1 189 50-273 14-212 (278)
129 2of3_A ZYG-9; multifunctional 96.6 0.038 1.3E-06 49.2 13.3 181 90-315 49-237 (266)
130 3kvt_A Potassium channel prote 96.3 0.00072 2.5E-08 51.8 0.2 95 347-442 6-105 (115)
131 1s1g_A Potassium voltage-gated 96.2 0.0056 1.9E-07 47.6 4.7 91 346-440 13-110 (124)
132 3l9t_A Putative uncharacterize 96.0 0.11 3.7E-06 44.9 12.3 138 52-209 78-218 (240)
133 3u0r_A Apoptosis inhibitor 5; 95.8 0.25 8.5E-06 47.3 15.0 123 15-157 40-162 (507)
134 2x1g_F Cadmus; transport prote 95.7 0.057 2E-06 58.8 12.1 134 15-159 476-616 (971)
135 3oc3_A Helicase MOT1, MOT1; re 95.7 0.071 2.4E-06 51.9 10.9 214 47-313 176-403 (800)
136 1lrv_A LRV, leucine-rich repea 95.6 0.016 5.6E-07 51.2 5.9 85 8-110 79-169 (244)
137 2x1g_F Cadmus; transport prote 95.6 0.16 5.5E-06 55.2 15.0 131 57-199 476-615 (971)
138 3ebb_A Phospholipase A2-activa 95.6 0.38 1.3E-05 43.9 15.0 155 18-174 117-279 (304)
139 4hat_C Exportin-1; heat repeat 95.6 0.055 1.9E-06 58.6 10.9 142 15-161 465-621 (1023)
140 1nn7_A Potassium channel KV4.2 95.4 0.0044 1.5E-07 46.7 1.4 80 348-431 2-86 (105)
141 2nz0_B Potassium voltage-gated 95.4 0.011 3.8E-07 46.9 3.8 85 343-431 32-121 (140)
142 3ibv_A Exportin-T; karyopherin 95.4 0.66 2.3E-05 50.1 18.5 140 14-157 204-360 (980)
143 3ibv_A Exportin-T; karyopherin 95.2 0.38 1.3E-05 52.0 16.1 310 3-316 128-526 (980)
144 2x19_B Importin-13; nuclear tr 94.9 0.32 1.1E-05 52.8 14.5 137 13-159 459-600 (963)
145 3l9t_A Putative uncharacterize 94.7 0.38 1.3E-05 41.5 11.3 133 9-162 77-211 (240)
146 1t1d_A Protein (potassium chan 94.6 0.01 3.5E-07 44.1 1.2 84 348-432 3-90 (100)
147 4hat_C Exportin-1; heat repeat 94.5 0.15 5E-06 55.4 10.4 140 57-200 465-619 (1023)
148 3c2g_A SYS-1 protein; beta-cat 94.4 0.51 1.7E-05 42.9 11.8 135 19-156 259-401 (619)
149 2f31_A Diaphanous protein homo 94.2 2.4 8.1E-05 37.0 15.9 126 36-162 35-184 (233)
150 3u0r_A Apoptosis inhibitor 5; 94.1 0.54 1.8E-05 45.1 11.9 122 56-196 39-160 (507)
151 2x19_B Importin-13; nuclear tr 93.5 1.4 4.9E-05 47.6 16.1 134 55-199 459-599 (963)
152 3ebb_A Phospholipase A2-activa 93.4 0.37 1.3E-05 44.0 9.5 123 15-140 160-287 (304)
153 3eg5_B Protein diaphanous homo 93.0 6.1 0.00021 37.3 17.8 139 23-162 87-250 (383)
154 2f31_A Diaphanous protein homo 92.8 1.4 4.6E-05 38.6 11.9 144 3-147 43-217 (233)
155 3eg5_B Protein diaphanous homo 92.5 2.5 8.5E-05 40.0 14.1 142 3-146 109-282 (383)
156 3m1i_C Exportin-1; heat repeat 92.4 0.79 2.7E-05 50.2 12.0 141 15-160 465-620 (1049)
157 3c2g_A SYS-1 protein; beta-cat 91.9 2.3 7.7E-05 38.8 11.9 117 62-181 260-378 (619)
158 3m1i_C Exportin-1; heat repeat 91.8 1.1 3.7E-05 49.1 12.2 139 57-199 465-618 (1049)
159 2bnx_A Diaphanous protein homo 91.3 6.1 0.00021 37.4 15.3 149 36-186 39-219 (386)
160 2bnx_A Diaphanous protein homo 90.3 4.4 0.00015 38.4 13.3 145 3-148 47-222 (386)
161 3gjx_A Exportin-1; transport, 90.3 23 0.00079 38.5 22.6 143 15-162 491-648 (1073)
162 3gjx_A Exportin-1; transport, 89.8 7.3 0.00025 42.3 16.0 234 46-315 29-276 (1073)
163 3qml_C Protein SLS1, nucleotid 89.7 2.6 8.9E-05 37.8 10.3 136 58-198 41-188 (315)
164 3a6p_A Exportin-5; exportin-5, 88.5 30 0.001 38.4 20.1 223 57-316 25-278 (1204)
165 3qml_C Protein SLS1, nucleotid 87.9 5.9 0.0002 35.5 11.3 146 6-158 25-189 (315)
166 1lsh_A Lipovitellin (LV-1N, LV 86.9 4.8 0.00017 43.8 12.4 162 7-201 395-578 (1056)
167 2vkp_A BTB/POZ domain-containi 86.4 0.65 2.2E-05 34.9 3.9 32 443-474 77-108 (109)
168 1lsh_A Lipovitellin (LV-1N, LV 85.7 7.8 0.00027 42.2 13.3 124 10-162 447-580 (1056)
169 3o2t_A Symplekin; heat repeat, 84.1 28 0.00096 32.6 15.1 140 7-157 26-182 (386)
170 2eqx_A Kelch repeat and BTB do 82.3 1.1 3.9E-05 33.3 3.6 68 407-475 4-83 (105)
171 3o2t_A Symplekin; heat repeat, 80.3 39 0.0013 31.7 17.0 105 3-115 63-182 (386)
172 3a6p_A Exportin-5; exportin-5, 78.4 41 0.0014 37.3 15.7 128 16-159 26-163 (1204)
173 3ldz_A STAM-1, signal transduc 77.4 3.3 0.00011 32.7 5.0 69 5-73 44-113 (140)
174 1x5b_A Signal transducing adap 76.8 4 0.00014 33.2 5.4 69 5-73 54-124 (163)
175 1mhq_A ADP-ribosylation factor 76.0 5 0.00017 32.0 5.7 71 4-74 39-116 (148)
176 1r29_A B-cell lymphoma 6 prote 74.5 2.5 8.7E-05 32.6 3.6 32 443-474 95-126 (127)
177 2yy9_A Zinc finger and BTB dom 73.5 1.4 4.9E-05 34.6 1.9 36 443-478 87-122 (135)
178 3g2s_A C-terminal fragment of 71.9 7.4 0.00025 31.0 5.7 70 5-74 50-126 (149)
179 2vpk_A Myoneurin; transcriptio 71.9 3.1 0.00011 31.5 3.4 30 443-472 86-115 (116)
180 1buo_A POZ domain, protein (pr 71.8 4.8 0.00016 30.7 4.6 32 443-474 89-120 (121)
181 3b84_A Zinc finger and BTB dom 71.7 2.1 7.3E-05 32.6 2.5 32 443-474 86-117 (119)
182 2q81_A MIZ-1 protein; BTB/POZ 71.6 4 0.00014 31.0 4.0 30 443-472 88-117 (119)
183 1juq_A ADP-ribosylation factor 70.2 6 0.00021 32.4 5.0 70 5-74 52-128 (171)
184 3zyq_A Hepatocyte growth facto 69.5 6.9 0.00024 33.8 5.5 71 4-74 46-118 (226)
185 3gs3_A Symplekin, LD45768P; he 67.6 64 0.0022 28.3 17.1 103 5-115 55-172 (257)
186 2if5_A Zinc finger and BTB dom 67.4 6.4 0.00022 29.8 4.4 29 443-471 91-119 (120)
187 2r9r_B Paddle chimera voltage 67.2 3.4 0.00012 40.9 3.4 83 346-432 52-141 (514)
188 2z8h_A Transcription regulator 66.0 1.4 4.9E-05 34.7 0.4 33 443-475 101-133 (138)
189 3gae_A Protein DOA1; UFD3, CDC 65.9 5 0.00017 35.4 3.9 104 13-120 100-221 (253)
190 3ldz_A STAM-1, signal transduc 65.7 29 0.001 27.1 8.0 69 130-198 43-113 (140)
191 1x5b_A Signal transducing adap 63.2 13 0.00046 30.0 5.7 69 130-198 53-124 (163)
192 2plx_B Peptide inhibitor; heli 62.8 7.6 0.00026 19.2 2.4 22 449-470 2-23 (26)
193 1mhq_A ADP-ribosylation factor 62.3 15 0.0005 29.2 5.7 69 130-198 39-115 (148)
194 3htm_A Speckle-type POZ protei 61.3 5.4 0.00019 32.5 3.2 34 411-444 132-165 (172)
195 1fs1_B SKP1, cyclin A/CDK2-ass 59.8 45 0.0015 26.0 8.1 81 395-477 25-123 (141)
196 3g2s_A C-terminal fragment of 58.5 28 0.00097 27.6 6.7 73 88-160 49-128 (149)
197 3gae_A Protein DOA1; UFD3, CDC 57.7 25 0.00084 30.9 6.9 104 56-162 101-221 (253)
198 1juq_A ADP-ribosylation factor 57.6 19 0.00064 29.4 5.6 69 130-198 51-127 (171)
199 2ppi_A Gigaxonin; BTB domain, 56.3 5.5 0.00019 31.5 2.2 29 443-471 115-143 (144)
200 1dvp_A HRS, hepatocyte growth 55.2 17 0.00059 31.1 5.4 69 5-73 44-114 (220)
201 1vsy_5 Proteasome activator BL 54.7 34 0.0012 36.8 8.6 218 89-315 135-366 (997)
202 4eoz_A Speckle-type POZ protei 53.8 6.3 0.00021 31.0 2.2 33 443-475 91-123 (145)
203 3pst_A Protein DOA1; protein d 52.8 70 0.0024 30.3 9.3 105 14-122 273-395 (425)
204 2ast_A S-phase kinase-associat 52.3 19 0.00065 28.9 4.9 64 411-476 49-127 (159)
205 3m5b_A Zinc finger and BTB dom 51.5 11 0.00037 28.6 3.1 31 443-473 87-117 (119)
206 3gs3_A Symplekin, LD45768P; he 51.0 1.3E+02 0.0043 26.4 17.4 141 7-157 16-172 (257)
207 3ga1_A Nucleus accumbens-assoc 48.0 3.1 0.00011 32.2 -0.5 33 442-474 95-127 (129)
208 3l3f_X Protein DOA1, DOA1/UFD3 47.7 36 0.0012 31.6 6.4 103 14-120 210-330 (362)
209 1elk_A Target of MYB1; superhe 45.8 31 0.0011 27.6 5.1 69 5-73 55-129 (157)
210 3hqi_A Speckle-type POZ protei 44.0 14 0.00047 33.6 3.2 33 411-443 272-304 (312)
211 3vld_A DNA mismatch repair pro 42.0 2E+02 0.0068 27.8 10.6 103 5-114 118-223 (500)
212 3pst_A Protein DOA1; protein d 40.7 1.3E+02 0.0044 28.5 9.1 130 62-201 243-391 (425)
213 4atg_A TAF6; transcription, TF 39.4 1.3E+02 0.0043 25.1 7.9 111 88-199 41-162 (196)
214 3hve_A Gigaxonin; ubiquitin, c 38.5 24 0.00081 30.9 3.7 32 443-474 99-130 (256)
215 1elk_A Target of MYB1; superhe 37.2 91 0.0031 24.8 6.6 70 46-115 54-129 (157)
216 3i3n_A Kelch-like protein 11; 34.8 27 0.00092 31.1 3.5 32 443-474 107-138 (279)
217 3zyq_A Hepatocyte growth facto 33.3 49 0.0017 28.3 4.7 72 88-159 46-119 (226)
218 1dvp_A HRS, hepatocyte growth 32.7 63 0.0021 27.5 5.3 69 130-198 43-114 (220)
219 1vsy_5 Proteasome activator BL 32.2 1.1E+02 0.0037 33.0 8.0 101 47-157 135-244 (997)
220 2b6c_A Hypothetical protein EF 31.7 2.1E+02 0.0073 24.0 8.6 106 15-135 102-207 (220)
221 3vld_A DNA mismatch repair pro 31.5 3.6E+02 0.012 26.0 11.4 111 81-197 110-223 (500)
222 2cmy_B Beta trypsin, veronica 30.6 16 0.00054 19.3 0.6 24 449-472 7-30 (34)
223 3l3f_X Protein DOA1, DOA1/UFD3 28.6 2.1E+02 0.0073 26.4 8.3 102 56-160 210-328 (362)
224 4b8b_A General negative regula 27.5 24 0.00083 34.8 1.9 140 361-507 445-599 (603)
225 1vdy_A Hypothetical protein (R 26.8 1E+02 0.0035 24.0 5.0 67 5-74 51-130 (140)
226 2ihc_A Transcription regulator 26.8 3.7 0.00013 31.5 -3.3 30 443-472 94-123 (124)
227 2xpp_A IWS1, ECU08_0440; trans 25.1 2.5E+02 0.0084 22.0 7.8 77 77-157 51-135 (145)
228 2p1m_A SKP1-like protein 1A; F 24.9 42 0.0014 26.9 2.7 63 411-475 47-125 (160)
229 2jak_A Serine/threonine-protei 21.0 4.7E+02 0.016 24.4 9.1 70 5-75 176-246 (392)
230 3jxy_A Alkylpurine DNA glycosy 20.3 3.4E+02 0.011 23.0 7.7 74 6-86 134-207 (232)
No 1
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=100.00 E-value=2e-32 Score=277.18 Aligned_cols=315 Identities=19% Similarity=0.249 Sum_probs=271.2
Q ss_pred CCChhHHHHhhcc-CCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHH
Q 010291 2 EGGIPPLVELLEF-TDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIK 80 (513)
Q Consensus 2 ~g~i~~Lv~lL~~-~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~ 80 (513)
+|++|.|+++|++ +++.+|..|+++|.|++.++++++..+++.|++|.|+.+|++++.++++.|+++|++|+.+++..|
T Consensus 99 ~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r 178 (510)
T 3ul1_B 99 AGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFR 178 (510)
T ss_dssp TTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHH
Confidence 5899999999975 568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHhhcCCC-----hHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHH
Q 010291 81 KEVLAAGALQPVIGLLSSCC-----SESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGR 155 (513)
Q Consensus 81 ~~~~~~g~i~~L~~ll~~~~-----~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~ 155 (513)
..+.+.|+++.|+.++...+ ..+.+.++|+|.+++.+...........++++.|+.++.+++++++..++++|.+
T Consensus 179 ~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~ 258 (510)
T 3ul1_B 179 DLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISY 258 (510)
T ss_dssp HHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHhccchhhhHHHHHHHHHHHHHHhhcccchhHHHHHHhHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 99999999999999998754 3567899999999998766555555556899999999999999999999999999
Q ss_pred Hhhccccc-hhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccC-cchHHHHHhhcCcccccchhhhhh-hhHHHHHH
Q 010291 156 LAQDMHNQ-AGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADN-EDNVADFIRVGGVQKLQDGEFIVQ-ATKDCVAK 232 (513)
Q Consensus 156 l~~~~~~~-~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~-~~~~~~~~~~g~i~~L~~~~~~~~-~~~~~~~~ 232 (513)
|+.+...+ ..+.+.|+++.|+.++.+++..++..++++|++++.. +.....+.+.|+++.|+....+.. .....+.+
T Consensus 259 L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~ 338 (510)
T 3ul1_B 259 LTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATW 338 (510)
T ss_dssp HTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGCC-CTTCSSHHHHHHHHH
T ss_pred HhhchhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCHHHHHHHhhccchHHHHHHhcCCCHHHHHHHHH
Confidence 99877654 4566789999999999999999999999999999874 455667779999999877554322 22333333
Q ss_pred HH--------HHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCC--CCcceeeecCCchHHHHhhhcCCCcchh
Q 010291 233 TL--------KRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSP--DDQRTIFIDGGGLELLLGLLGSTNPKQQ 302 (513)
Q Consensus 233 ~~--------~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~--~~~~~~l~~~~~i~~L~~ll~~~~~~v~ 302 (513)
++ .....+.+.++++.|+.++++++..+|..|+++|+|++.. .+....+.+.|+++.|++++.+++++++
T Consensus 339 aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g~i~~L~~LL~~~d~~i~ 418 (510)
T 3ul1_B 339 TMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKII 418 (510)
T ss_dssp HHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHHGGGCSCHHHH
T ss_pred HHHHHHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCHHHH
Confidence 33 3445677889999999999999999999999999999864 3356678899999999999999999999
Q ss_pred hhHHHHHHHhhhcc
Q 010291 303 LDGAVALFKLANKA 316 (513)
Q Consensus 303 ~~a~~~L~~l~~~~ 316 (513)
..++++|.++....
T Consensus 419 ~~~L~aL~nil~~~ 432 (510)
T 3ul1_B 419 QVILDAISNIFQAA 432 (510)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998643
No 2
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=100.00 E-value=2.1e-33 Score=274.99 Aligned_cols=314 Identities=20% Similarity=0.227 Sum_probs=262.0
Q ss_pred CCChhHHHHhhccC------------CHHHHHHHHHHHHHhhccCchhHHHHHhcCCH----------HHHHHhhcCC--
Q 010291 2 EGGIPPLVELLEFT------------DTKVQRAAAGALRTLAFKNDENKNQIVECNAL----------PTLILMLRSE-- 57 (513)
Q Consensus 2 ~g~i~~Lv~lL~~~------------~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i----------~~Lv~lL~~~-- 57 (513)
+|++|.|+++|+.. +++++.+|+++|.|++.++++......+.|++ +.+++++.+.
T Consensus 69 ~g~~p~lv~~l~~~~~~~~~~~~~~~~~~~~~~a~~al~ni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 148 (458)
T 3nmz_A 69 SGCLPLLIQLLHGNDKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCETCWEWQEAHEP 148 (458)
T ss_dssp HTCHHHHHHHHTCTTCCSCC---CCCCHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSS
T ss_pred CCCHHHHHHHHhcccccccccccccCCHHHHHHHHHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhhHHHHHHHHhhcc
Confidence 48999999999863 37999999999999999999988888888777 6667777743
Q ss_pred CHH-----HHH-------HHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcC-----------CChHHHHHHHHHHHHh
Q 010291 58 DSA-----IHY-------EAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSS-----------CCSESQREAALLLGQF 114 (513)
Q Consensus 58 ~~~-----v~~-------~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~-----------~~~~~~~~a~~~L~~l 114 (513)
+.+ +++ .|+++|+|++.+ +++|+.+.+.|+++.|+.++.. .++.+++.|+|+|.||
T Consensus 149 ~~~~~~~~~~~~~~~~~~qAv~aL~nls~~-~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nL 227 (458)
T 3nmz_A 149 GMDQDKNPMPAPVEHQICPAVCVLMKLSFD-EEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNL 227 (458)
T ss_dssp SSCCCSCC--CCCTTTTHHHHHHHHHHTTS-HHHHHHHHHTTHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCccchhhHHHHHHHHHHHHhcCC-HHHHHHHHHCCCHHHHHHHHhhhhcccccccCCCCHHHHHHHHHHHHHH
Confidence 222 444 899999999876 8899999999999999999952 2367899999999999
Q ss_pred hcCCchhhHHHHh-cCChHHHHHHhCCCCHHHHHHHHHHHHHHhhc--cccchhhHhcCChHHHHHHh-cCCCHHHHHHH
Q 010291 115 AATDSDCKVHIVQ-RGAVRPLIEMLQSPDVQLREMSAFALGRLAQD--MHNQAGIAHNGGLVPLLKLL-DSKNGSLQHNA 190 (513)
Q Consensus 115 ~~~~~~~~~~~~~-~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~--~~~~~~~~~~~~i~~L~~ll-~~~~~~~~~~a 190 (513)
+.+++..+..+.. .|+++.|+.+|+++++++++.|+|+|+||+.+ +.++..+.+.|+++.|+++| .+++..+++.+
T Consensus 228 a~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A 307 (458)
T 3nmz_A 228 TFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSV 307 (458)
T ss_dssp HTTCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHH
T ss_pred hCCCcccHHHHHHcCCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCCCHHHHHHH
Confidence 9887767766654 56799999999999999999999999999974 45788899999999999975 56788999999
Q ss_pred HHHHHhccc-CcchHHHHH-hhcCcccccchhhhhhh-----hHHHHHHHH-----------HHHHHHhhhhhHHHHHHH
Q 010291 191 AFALYGLAD-NEDNVADFI-RVGGVQKLQDGEFIVQA-----TKDCVAKTL-----------KRLEEKIHGRVLNHLLYL 252 (513)
Q Consensus 191 ~~~L~~l~~-~~~~~~~~~-~~g~i~~L~~~~~~~~~-----~~~~~~~~~-----------~~~~~~~~~~~l~~Lv~l 252 (513)
+.+|+||+. +++++..+. ..|+++.|++....... ......+++ ++.+.+.+.|+++.|+.+
T Consensus 308 ~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~L 387 (458)
T 3nmz_A 308 LSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQH 387 (458)
T ss_dssp HHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHH
Confidence 999999998 768888888 78999988765442211 222222222 344566788999999999
Q ss_pred HHHhhcchhhhHHHHHhhccC-CCCcceeeecCCchHHHHhhhcCCCcchhhhHHHHHHHhhhcc
Q 010291 253 MRVAEKGVQRRVALALAHLCS-PDDQRTIFIDGGGLELLLGLLGSTNPKQQLDGAVALFKLANKA 316 (513)
Q Consensus 253 L~~~~~~v~~~a~~aL~~l~~-~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~ 316 (513)
|++++..+++.|+++|+|++. +++++..+.+.|+++.|++++.++++.+++.|+++|.+|+.+.
T Consensus 388 L~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~I~~Lv~LL~s~~~~v~~~Aa~AL~nL~~~~ 452 (458)
T 3nmz_A 388 LKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANR 452 (458)
T ss_dssp SSCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHHTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTCC
T ss_pred HcCCChHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999985 5668889999999999999999999999999999999999764
No 3
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=100.00 E-value=1.3e-31 Score=272.85 Aligned_cols=314 Identities=19% Similarity=0.247 Sum_probs=270.8
Q ss_pred CCChhHHHHhhcc-CCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHH
Q 010291 2 EGGIPPLVELLEF-TDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIK 80 (513)
Q Consensus 2 ~g~i~~Lv~lL~~-~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~ 80 (513)
+|++|.|+++|+. +++.++..|+++|.+++.++++.+..+++.|+++.|+.+|.++++++++.|+++|++|+.+++..+
T Consensus 118 ~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r 197 (529)
T 3tpo_A 118 AGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFR 197 (529)
T ss_dssp TTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHH
Confidence 5899999999964 569999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHhhcCCC-----hHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHH
Q 010291 81 KEVLAAGALQPVIGLLSSCC-----SESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGR 155 (513)
Q Consensus 81 ~~~~~~g~i~~L~~ll~~~~-----~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~ 155 (513)
..+.+.|+++.|+.++...+ ..+.+.++|+|.+++.+...........++++.|+.++.+++++++..++|+|.+
T Consensus 198 ~~i~~~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~ 277 (529)
T 3tpo_A 198 DLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISY 277 (529)
T ss_dssp HHHHHTTCHHHHHHTTCSSCGGGSCHHHHHHHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHcCCcHHHHHHHhccchhHhHHHHHHHHHHHHHHHHhcccchhhHHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 99999999999999998654 3567899999999998766655555567899999999999999999999999999
Q ss_pred Hhhccccc-hhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccC-cchHHHHHhhcCcccccchhhhhh-hhHHHHHH
Q 010291 156 LAQDMHNQ-AGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADN-EDNVADFIRVGGVQKLQDGEFIVQ-ATKDCVAK 232 (513)
Q Consensus 156 l~~~~~~~-~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~-~~~~~~~~~~g~i~~L~~~~~~~~-~~~~~~~~ 232 (513)
++.+...+ ..+...|+++.|+.++.+++..++..++.+|++++.. +.....+.+.|+++.|+....+.. .....+.+
T Consensus 278 l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~ 357 (529)
T 3tpo_A 278 LTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATW 357 (529)
T ss_dssp HHSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHH
T ss_pred hhhhhhhhHHHHHhccchHHHHHHhcCCChhHHHHHHHHHHHHHccchHHHHHHhhcccHHHHHHHHcCCCHHHHHHHHH
Confidence 99877654 4567789999999999999999999999999999874 455667779999998877544222 22233333
Q ss_pred HH--------HHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCC--CCcceeeecCCchHHHHhhhcCCCcchh
Q 010291 233 TL--------KRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSP--DDQRTIFIDGGGLELLLGLLGSTNPKQQ 302 (513)
Q Consensus 233 ~~--------~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~--~~~~~~l~~~~~i~~L~~ll~~~~~~v~ 302 (513)
++ .....+.+.++++.|+.+|.+++.+++..|+|+|+|++.+ ++....+++.|+++.|+++|.+++++++
T Consensus 358 aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g~i~~L~~LL~~~d~~i~ 437 (529)
T 3tpo_A 358 TMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKII 437 (529)
T ss_dssp HHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHH
T ss_pred HHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCcCHHHHHHHhcCCCHHHH
Confidence 33 3345677889999999999999999999999999999864 3355678999999999999999999999
Q ss_pred hhHHHHHHHhhhc
Q 010291 303 LDGAVALFKLANK 315 (513)
Q Consensus 303 ~~a~~~L~~l~~~ 315 (513)
..++.+|.++...
T Consensus 438 ~~~L~aL~nil~~ 450 (529)
T 3tpo_A 438 QVILDAISNIFQA 450 (529)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 4
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.97 E-value=5.2e-31 Score=262.65 Aligned_cols=315 Identities=17% Similarity=0.197 Sum_probs=259.0
Q ss_pred CChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 3 GGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 3 g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
..+|.++++|+++++.+|..|+++|.+++.+++..+..+.+.|+++.|+++|+++++.++..|+++|++|+.++++++..
T Consensus 2 ~~l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~ 81 (457)
T 1xm9_A 2 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 81 (457)
T ss_dssp CCHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 36899999999999999999999999999878888889999999999999999999999999999999999988999999
Q ss_pred HHhCCChHHHHHhhc-CCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHh--------CC--------CCHHH
Q 010291 83 VLAAGALQPVIGLLS-SCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEML--------QS--------PDVQL 145 (513)
Q Consensus 83 ~~~~g~i~~L~~ll~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l--------~~--------~~~~~ 145 (513)
+++.|+++.|+++|. ++++++++.++|+|+|++.+ ++.+..+++ |+++.|+.++ .+ .++.+
T Consensus 82 i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~-~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v 159 (457)
T 1xm9_A 82 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 159 (457)
T ss_dssp HHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTS-SSTHHHHHH-HHHHHHHHHTTHHHHTCC---------CCCHHH
T ss_pred HHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcC-HHhHHHHHh-ccHHHHHHHHhccccccccCccchhcccccHHH
Confidence 999999999999999 78999999999999999977 777888888 9999999999 32 24567
Q ss_pred HHHHHHHHHHHhhccccchhhHhc-CChHHHHHHhcC-------------------------------------------
Q 010291 146 REMSAFALGRLAQDMHNQAGIAHN-GGLVPLLKLLDS------------------------------------------- 181 (513)
Q Consensus 146 ~~~a~~~L~~l~~~~~~~~~~~~~-~~i~~L~~ll~~------------------------------------------- 181 (513)
...|+|+|+||+.+++++..+.+. |+++.|+.++.+
T Consensus 160 ~~~a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~~~~~e~a~~~L~nLs~~~~~~~~~~~~~~~~~~~~ 239 (457)
T 1xm9_A 160 FFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARN 239 (457)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC--
T ss_pred HHHHHHHHHHHccCHHHHHHHHHcCCCHHHHHHHHHhhccccCCchHHHHHHHHHHHhcccchhccCcchhhhccccccc
Confidence 779999999999987778888886 888888877753
Q ss_pred --------------------------------------------------------CCHHHHHHHHHHHHhcccCcch--
Q 010291 182 --------------------------------------------------------KNGSLQHNAAFALYGLADNEDN-- 203 (513)
Q Consensus 182 --------------------------------------------------------~~~~~~~~a~~~L~~l~~~~~~-- 203 (513)
+++.+++.|+++|+|++.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~L~~lL~~~~~~~~~e~a~~aL~nl~~~~~~~~ 319 (457)
T 1xm9_A 240 AYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMS 319 (457)
T ss_dssp --------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHH
T ss_pred ccccccccchhhccchhhhhccccCCccccccCchHHHHHhCcchHHHHHHHHhhcCCHHHHHHHHHHHHHhccCcCcch
Confidence 1245666788999999874322
Q ss_pred ----HHHHHhhcCcccccchhhhh-hhhHHHHHHHHHHH------HHHhhhhhHHHHHHHHHHhhc------chhhhHHH
Q 010291 204 ----VADFIRVGGVQKLQDGEFIV-QATKDCVAKTLKRL------EEKIHGRVLNHLLYLMRVAEK------GVQRRVAL 266 (513)
Q Consensus 204 ----~~~~~~~g~i~~L~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~l~~Lv~lL~~~~~------~v~~~a~~ 266 (513)
+..+.+.|+++.|++..... .....-+.+++.++ ...+..++++.|+.+|.++++ ++...+++
T Consensus 320 ~~~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nls~~~~~~~~i~~~~i~~Lv~lL~~~~~~~~~~~~v~~~~l~ 399 (457)
T 1xm9_A 320 SGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACY 399 (457)
T ss_dssp HHHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSGGGHHHHHHHTHHHHHHTTTSCCSCSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCchHHHHHHhCCCHhHHHHHHHHHHHHhcCHHHHHHHHHhhhHHHHHhccCCCCCCCCcHHHHHHHHH
Confidence 12233578999887755432 22233333444433 334556899999999998644 57789999
Q ss_pred HHhhccCC-CCcceeeecCCchHHHHhhhcCC-CcchhhhHHHHHHHhhhccccc
Q 010291 267 ALAHLCSP-DDQRTIFIDGGGLELLLGLLGST-NPKQQLDGAVALFKLANKATTL 319 (513)
Q Consensus 267 aL~~l~~~-~~~~~~l~~~~~i~~L~~ll~~~-~~~v~~~a~~~L~~l~~~~~~~ 319 (513)
+|.|+... ++....+.+.|+++.|.+++.++ ++++++.|+++|.++..+.+-+
T Consensus 400 ~l~ni~~~~~~~~~~i~~~g~l~~L~~L~~~~~~~~i~~~A~~~L~~~~~~~~l~ 454 (457)
T 1xm9_A 400 TVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKELQ 454 (457)
T ss_dssp HHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTSSSTTCS
T ss_pred HHHHHHhcCHHHHHHHHHcCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHcchhhh
Confidence 99999764 45677889999999999999998 9999999999999998775543
No 5
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.97 E-value=1.8e-31 Score=254.00 Aligned_cols=266 Identities=20% Similarity=0.224 Sum_probs=232.8
Q ss_pred HHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcC-----------CCHHHHHHHHHHHHHhhcCChhHHHHHHhC
Q 010291 18 KVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRS-----------EDSAIHYEAVGVIGNLVHSSPNIKKEVLAA 86 (513)
Q Consensus 18 ~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~-----------~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~ 86 (513)
..+..|+++|.+++. ++++|..+.+.|++++|+.+|.. .++.++..|+++|.+|+.+++..+..+...
T Consensus 47 ~~~~~A~~aL~nls~-d~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~~~~k~~i~~~ 125 (354)
T 3nmw_A 47 HQICPAVCVLMKLSF-DEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSM 125 (354)
T ss_dssp GTHHHHHHHHHHHHT-SHHHHHHHHHTTHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcC-CHHHHHHHHHcCCHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHc
Confidence 456689999999998 58999999999999999999952 247899999999999999888788877665
Q ss_pred -CChHHHHHhhcCCChHHHHHHHHHHHHhhcC-CchhhHHHHhcCChHHHHHHh-CCCCHHHHHHHHHHHHHHhh-cccc
Q 010291 87 -GALQPVIGLLSSCCSESQREAALLLGQFAAT-DSDCKVHIVQRGAVRPLIEML-QSPDVQLREMSAFALGRLAQ-DMHN 162 (513)
Q Consensus 87 -g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~-~~~~~~~~~~~~~i~~L~~~l-~~~~~~~~~~a~~~L~~l~~-~~~~ 162 (513)
|+++.|+.+|.++++++++.|+++|.||+.. ++.++..+.+.|+++.|+++| +++++++++.++.+|+||+. .+++
T Consensus 126 ~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~n 205 (354)
T 3nmw_A 126 KGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTEN 205 (354)
T ss_dssp HHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhh
Confidence 4599999999999999999999999999975 567888999999999999974 66789999999999999998 5567
Q ss_pred chhhH-hcCChHHHHHHhcCCCH----HHHHHHHHHHHhccc----CcchHHHHHhhcCcccccchhhhhhhhHHHHHHH
Q 010291 163 QAGIA-HNGGLVPLLKLLDSKNG----SLQHNAAFALYGLAD----NEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKT 233 (513)
Q Consensus 163 ~~~~~-~~~~i~~L~~ll~~~~~----~~~~~a~~~L~~l~~----~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~ 233 (513)
+..+. ..|+++.|++++.++++ .++..++++|+||+. +++++..+
T Consensus 206 k~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i-------------------------- 259 (354)
T 3nmw_A 206 KADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQIL-------------------------- 259 (354)
T ss_dssp HHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHH--------------------------
T ss_pred hHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHH--------------------------
Confidence 77777 68999999999987764 589999999999995 55554444
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccC-CCCcceeeecCCchHHHHhhhcCCCcchhhhHHHHHHHh
Q 010291 234 LKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCS-PDDQRTIFIDGGGLELLLGLLGSTNPKQQLDGAVALFKL 312 (513)
Q Consensus 234 ~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~-~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l 312 (513)
.+.|+++.|+.+|++++..+++.|+++|+|++. +++++..+.+.|+++.|++++.++++.+++.|+++|.+|
T Consensus 260 -------~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~~Lv~LL~s~~~~i~~~A~~aL~nL 332 (354)
T 3nmw_A 260 -------RENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNL 332 (354)
T ss_dssp -------HTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHTTTTCSSHHHHHHHHHHHHHH
T ss_pred -------HHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 355688999999999999999999999999995 566888899999999999999999999999999999999
Q ss_pred hhccc
Q 010291 313 ANKAT 317 (513)
Q Consensus 313 ~~~~~ 317 (513)
+.+.+
T Consensus 333 ~~~~~ 337 (354)
T 3nmw_A 333 MANRP 337 (354)
T ss_dssp HTTCC
T ss_pred HcCCH
Confidence 98754
No 6
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=99.97 E-value=1.7e-30 Score=262.89 Aligned_cols=312 Identities=19% Similarity=0.302 Sum_probs=264.2
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhcc-CchhHHHHHhcCCHHHHHHhhc-CCCHHHHHHHHHHHHHhhcCChhHHH
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAFK-NDENKNQIVECNALPTLILMLR-SEDSAIHYEAVGVIGNLVHSSPNIKK 81 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~-~~~~~~~i~~~g~i~~Lv~lL~-~~~~~v~~~a~~~L~~l~~~~~~~~~ 81 (513)
.++.+++.+++++++.|..|+..++++... ...-...+++.|+||.|+++|+ ++++.++..|+|+|+||+.++++.++
T Consensus 58 ~i~~~v~~l~s~d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~ 137 (510)
T 3ul1_B 58 SVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTK 137 (510)
T ss_dssp CHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 588999999999999999999999987642 2233578889999999999998 55689999999999999999999999
Q ss_pred HHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCC-----HHHHHHHHHHHHHH
Q 010291 82 EVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPD-----VQLREMSAFALGRL 156 (513)
Q Consensus 82 ~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~-----~~~~~~a~~~L~~l 156 (513)
.+++.|+++.|+.+|.+++.++++.|+|+|+|++.++++.+..+.+.|+++.|+.++..++ ..+...++++|.|+
T Consensus 138 ~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl 217 (510)
T 3ul1_B 138 AVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNL 217 (510)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHHHHHHhccchhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888999999999999999999998764 35788999999999
Q ss_pred hhccccchhh-HhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchH-HHHHhhcCcccccchhhhhh-hhHHHHHHH
Q 010291 157 AQDMHNQAGI-AHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNV-ADFIRVGGVQKLQDGEFIVQ-ATKDCVAKT 233 (513)
Q Consensus 157 ~~~~~~~~~~-~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~-~~~~~~g~i~~L~~~~~~~~-~~~~~~~~~ 233 (513)
+.+......+ ...++++.|++++.+++++++..++++|++|+.+.... ..+...|+++.|+....... ........+
T Consensus 218 ~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~a 297 (510)
T 3ul1_B 218 CRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRA 297 (510)
T ss_dssp HCCCSSCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHH
T ss_pred hhcccchhHHHHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhhchhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHH
Confidence 9877665444 34678899999999999999999999999999866555 44568888888876444221 111222222
Q ss_pred H--------HHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCC-cceeeecCCchHHHHhhhcCCCcchhhh
Q 010291 234 L--------KRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDD-QRTIFIDGGGLELLLGLLGSTNPKQQLD 304 (513)
Q Consensus 234 ~--------~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~-~~~~l~~~~~i~~L~~ll~~~~~~v~~~ 304 (513)
+ .....+.+.++++.|+.+|++++..++..|+|+|+|++.+.. .+..+.+.|+++.|+.++.+++.++|..
T Consensus 298 L~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~ 377 (510)
T 3ul1_B 298 IGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKE 377 (510)
T ss_dssp HHHHTTSCHHHHHHHHHTTGGGGCC-CTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHH
T ss_pred HHHhhcCCHHHHHHHhhccchHHHHHHhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHH
Confidence 2 333556788999999999999999999999999999987644 6778889999999999999999999999
Q ss_pred HHHHHHHhhhc
Q 010291 305 GAVALFKLANK 315 (513)
Q Consensus 305 a~~~L~~l~~~ 315 (513)
|+++|.|++.+
T Consensus 378 Aa~aL~Nl~~~ 388 (510)
T 3ul1_B 378 AAWAITNYTSG 388 (510)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHcc
Confidence 99999999875
No 7
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.97 E-value=2.6e-30 Score=258.47 Aligned_cols=311 Identities=15% Similarity=0.200 Sum_probs=252.1
Q ss_pred CCChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcC-ChhHH
Q 010291 2 EGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHS-SPNIK 80 (513)
Q Consensus 2 ~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~-~~~~~ 80 (513)
.+.++.|+++|+++++.++..|+++|.+++.++++++..+.+.|+|+.|+++|+++++++++.|+++|+||+.+ +++++
T Consensus 47 ~~~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk 126 (584)
T 3l6x_A 47 QPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNK 126 (584)
T ss_dssp CCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHH
T ss_pred cccHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHHH
Confidence 47899999999999999999999999999988999999999999999999999999999999999999999985 68999
Q ss_pred HHHHhCCChHHHHHhhcC-CChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhC------------------CC
Q 010291 81 KEVLAAGALQPVIGLLSS-CCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQ------------------SP 141 (513)
Q Consensus 81 ~~~~~~g~i~~L~~ll~~-~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~------------------~~ 141 (513)
..+.+.|+++.|+.+|.+ .+.++++.++++|+||+. .++++..+++ ++++.|++++. .+
T Consensus 127 ~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~-~~~~k~~I~~-~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~ 204 (584)
T 3l6x_A 127 IAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSS-HDSIKMEIVD-HALHALTDEVIIPHSGWEREPNEDCKPRHIE 204 (584)
T ss_dssp HHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTT-SGGGHHHHHH-HTHHHHHHHTHHHHHCCC----------CCC
T ss_pred HHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhC-CchhhHHHHh-ccHHHHHHHHhcccccccccccccccccccc
Confidence 999999999999999997 578899999999999986 5677777775 57999999871 23
Q ss_pred CHHHHHHHHHHHHHHhhcccc-chhhHhcCC-hHHHHHHhcC------CCHHHHHHHHHHHHhcccCcchH-------H-
Q 010291 142 DVQLREMSAFALGRLAQDMHN-QAGIAHNGG-LVPLLKLLDS------KNGSLQHNAAFALYGLADNEDNV-------A- 205 (513)
Q Consensus 142 ~~~~~~~a~~~L~~l~~~~~~-~~~~~~~~~-i~~L~~ll~~------~~~~~~~~a~~~L~~l~~~~~~~-------~- 205 (513)
+++++++|+++|.||+.++++ |..+.+.++ ++.|+.++.+ .+...+++++++|+||+...+.. .
T Consensus 205 d~~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~~~~~~~~~~~~~enav~aL~NLs~~~~~e~~~~~~~~~ 284 (584)
T 3l6x_A 205 WESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERYQE 284 (584)
T ss_dssp CHHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHTTHHHHSTTCCC---
T ss_pred cHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCcHHHHHHHHHHhhcccCccHHHHHHHHHHHHHhhccccccccchhhhhh
Confidence 689999999999999987654 888887555 5689999874 46788999999999999642110 0
Q ss_pred ---------HHHhhcCcccccch---------hh--hhhhhHHHHHHHHHHH------------HHHhhhhhHHHHHHHH
Q 010291 206 ---------DFIRVGGVQKLQDG---------EF--IVQATKDCVAKTLKRL------------EEKIHGRVLNHLLYLM 253 (513)
Q Consensus 206 ---------~~~~~g~i~~L~~~---------~~--~~~~~~~~~~~~~~~~------------~~~~~~~~l~~Lv~lL 253 (513)
.....++++.|.+. .. ........+++++.++ ..+.+.++++.|+.+|
T Consensus 285 ~~~~~~~~~~~~~~~Gve~L~~~~~v~~Ll~LL~~s~~~~v~E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv~LL 364 (584)
T 3l6x_A 285 AAPNVANNTGTSPARGYELLFQPEVVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLL 364 (584)
T ss_dssp -----------CCCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGG
T ss_pred hcccccccccccCchhHHHHhcccHHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCccccHHHHHHHHHcCcHHHHHHHH
Confidence 01134455544331 11 1122334444555444 1335578899999999
Q ss_pred HHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcCC--------CcchhhhHHHHHHHhhhc
Q 010291 254 RVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGST--------NPKQQLDGAVALFKLANK 315 (513)
Q Consensus 254 ~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~~--------~~~v~~~a~~~L~~l~~~ 315 (513)
.+++..++..|+++|.||+.++..+..+ ..|+++.|+++|.++ +.+++..|+++|.|++..
T Consensus 365 ~s~~~~v~~~A~~aL~nLs~~~~~~~~I-~~g~ip~LV~LL~~~~~~~~~~~s~~v~~~a~~tL~NL~a~ 433 (584)
T 3l6x_A 365 TNEHERVVKAASGALRNLAVDARNKELI-GKHAIPNLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAE 433 (584)
T ss_dssp GCSCHHHHHHHHHHHHHHHTTCSCHHHH-HHHHHHHHHHTSSSSSCSGGGTCCHHHHHHHHHHHHHHHTT
T ss_pred cCCCHHHHHHHHHHHHHHhCChhHHHHH-HhCCHHHHHHHhcCCcccccccchHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999988877655 789999999999875 346778899999999754
No 8
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.97 E-value=6.4e-31 Score=240.97 Aligned_cols=160 Identities=21% Similarity=0.346 Sum_probs=142.1
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCC--CCCCCceecCCCCHHHHHHHHHHHhcCccccCHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYR--EKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLD 414 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~--e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~ 414 (513)
..++.++.++|+++.++|+.|++||.||+++|+||++||++++. |+....|.++++++++|+.+++|+|||.+.++.+
T Consensus 23 ~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt~~~~i~~~ 102 (256)
T 3hve_A 23 SSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLNED 102 (256)
T ss_dssp HTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHHSCCCCC-C
T ss_pred HHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccCCCCcccHh
Confidence 46788999999999999999999999999999999999999887 6778899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHhcCChhhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHhhCchhhHhhhhhhHHH
Q 010291 415 IAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLSTRPGHSNLIQRIIPE 494 (513)
Q Consensus 415 ~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~f~~l~~~~~~~ 494 (513)
++.+++.+|++|++++|++.|+++|.+.++++||+.++.+|+.|++++|.+.|.+||.+||.++.++++|.+|+.+.+.+
T Consensus 103 ~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~ 182 (256)
T 3hve_A 103 TIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVSSTEEFLELSPQKLKE 182 (256)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTCHHHHSSCHHHHHH
T ss_pred HHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhCCcchhcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997766555
Q ss_pred HH
Q 010291 495 IH 496 (513)
Q Consensus 495 l~ 496 (513)
+.
T Consensus 183 lL 184 (256)
T 3hve_A 183 VI 184 (256)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 9
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=99.97 E-value=1.4e-29 Score=257.81 Aligned_cols=312 Identities=19% Similarity=0.298 Sum_probs=265.1
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhc-cCchhHHHHHhcCCHHHHHHhhc-CCCHHHHHHHHHHHHHhhcCChhHHH
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAF-KNDENKNQIVECNALPTLILMLR-SEDSAIHYEAVGVIGNLVHSSPNIKK 81 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~-~~~~~~~~i~~~g~i~~Lv~lL~-~~~~~v~~~a~~~L~~l~~~~~~~~~ 81 (513)
.++.+++.+.+++++.+..|+..++++.. ........+++.|++|.|+++|. ++++.++..|+++|++++.+++..+.
T Consensus 77 ~l~~lv~~l~s~d~~~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~ 156 (529)
T 3tpo_A 77 SVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTK 156 (529)
T ss_dssp CHHHHHHHHTSSCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCchHHHHHHCCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 57889999999999999999999998754 23344678899999999999997 56799999999999999999999999
Q ss_pred HHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCC-----HHHHHHHHHHHHHH
Q 010291 82 EVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPD-----VQLREMSAFALGRL 156 (513)
Q Consensus 82 ~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~-----~~~~~~a~~~L~~l 156 (513)
.+++.|+++.|+.++.+++.++++.|+|+|+|++.++++.+..+.+.|+++.|+.++..++ ..+...++|+|.++
T Consensus 157 ~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl 236 (529)
T 3tpo_A 157 AVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNL 236 (529)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTTCSSCGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHHHHHHHcCCcHHHHHHHhccchhHhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888999999999999999999998754 45788999999999
Q ss_pred hhccccchhh-HhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchH-HHHHhhcCcccccchhhhhh-hhHHHHHHH
Q 010291 157 AQDMHNQAGI-AHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNV-ADFIRVGGVQKLQDGEFIVQ-ATKDCVAKT 233 (513)
Q Consensus 157 ~~~~~~~~~~-~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~-~~~~~~g~i~~L~~~~~~~~-~~~~~~~~~ 233 (513)
+.+......+ ...++++.|+.++.++++.++..++++|.+++.+.... ..+...|+++.|+....... .....+..+
T Consensus 237 ~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~a 316 (529)
T 3tpo_A 237 CRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRA 316 (529)
T ss_dssp HCCCTTCCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHH
T ss_pred HhcccchhhHHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhhhhhHHHHHhccchHHHHHHhcCCChhHHHHHHHH
Confidence 9877654443 44688999999999999999999999999999866554 44568899988876544221 111222222
Q ss_pred H--------HHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCC-cceeeecCCchHHHHhhhcCCCcchhhh
Q 010291 234 L--------KRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDD-QRTIFIDGGGLELLLGLLGSTNPKQQLD 304 (513)
Q Consensus 234 ~--------~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~-~~~~l~~~~~i~~L~~ll~~~~~~v~~~ 304 (513)
+ .....+.+.|+++.|+.+|.++++.++..|+|+|+|++.+.. .+..+.+.|+++.|+.++.+++++++..
T Consensus 317 L~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~ 396 (529)
T 3tpo_A 317 IGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKA 396 (529)
T ss_dssp HHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHccchHHHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHH
Confidence 2 233556788999999999999999999999999999987644 6677889999999999999999999999
Q ss_pred HHHHHHHhhhc
Q 010291 305 GAVALFKLANK 315 (513)
Q Consensus 305 a~~~L~~l~~~ 315 (513)
|+|+|.+++.+
T Consensus 397 A~~aL~nl~~~ 407 (529)
T 3tpo_A 397 AAWAITNYTSG 407 (529)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHcC
Confidence 99999999875
No 10
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.97 E-value=4.1e-30 Score=257.02 Aligned_cols=320 Identities=20% Similarity=0.240 Sum_probs=255.3
Q ss_pred CCChhHHHHhhccCCHHHHHHHHHHHHHhhcc-CchhHHHHHhcCCHHHHHHhhcC-CCHHHHHHHHHHHHHhhcCChhH
Q 010291 2 EGGIPPLVELLEFTDTKVQRAAAGALRTLAFK-NDENKNQIVECNALPTLILMLRS-EDSAIHYEAVGVIGNLVHSSPNI 79 (513)
Q Consensus 2 ~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~-~~~~~~~i~~~g~i~~Lv~lL~~-~~~~v~~~a~~~L~~l~~~~~~~ 79 (513)
.|+||.|+++|+++++.++..|+++|.+++.+ +++++..+++.|+|+.|+++|.+ .+.++++.|+++|++|+.. +.+
T Consensus 89 ~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~-~~~ 167 (584)
T 3l6x_A 89 LKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSH-DSI 167 (584)
T ss_dssp TTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTS-GGG
T ss_pred cCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCC-chh
Confidence 58999999999999999999999999999985 68999999999999999999996 6789999999999999975 777
Q ss_pred HHHHHhCCChHHHHHhhc------------------CCChHHHHHHHHHHHHhhcCCchhhHHHHh-cCChHHHHHHhCC
Q 010291 80 KKEVLAAGALQPVIGLLS------------------SCCSESQREAALLLGQFAATDSDCKVHIVQ-RGAVRPLIEMLQS 140 (513)
Q Consensus 80 ~~~~~~~g~i~~L~~ll~------------------~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~-~~~i~~L~~~l~~ 140 (513)
+..+++ ++++.|++++. ..+.++++.|+++|.||+..+++.+..+.+ .|+++.|+.++++
T Consensus 168 k~~I~~-~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d~~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~ 246 (584)
T 3l6x_A 168 KMEIVD-HALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQA 246 (584)
T ss_dssp HHHHHH-HTHHHHHHHTHHHHHCCC----------CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHH
T ss_pred hHHHHh-ccHHHHHHHHhcccccccccccccccccccccHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCcHHHHHHHHHH
Confidence 888885 57999999872 235799999999999999888888888887 4567899999864
Q ss_pred ------CCHHHHHHHHHHHHHHhhcccc--------------------------chhhHhcCChHHHHHHhc-CCCHHHH
Q 010291 141 ------PDVQLREMSAFALGRLAQDMHN--------------------------QAGIAHNGGLVPLLKLLD-SKNGSLQ 187 (513)
Q Consensus 141 ------~~~~~~~~a~~~L~~l~~~~~~--------------------------~~~~~~~~~i~~L~~ll~-~~~~~~~ 187 (513)
.+...+++|+++|+||+...+. ...+.+.++++.|+.++. +.++.++
T Consensus 247 ~~~~~~~~~~~~enav~aL~NLs~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~Gve~L~~~~~v~~Ll~LL~~s~~~~v~ 326 (584)
T 3l6x_A 247 EIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGTSPARGYELLFQPEVVRIYISLLKESKTPAIL 326 (584)
T ss_dssp HHHTTCCSCHHHHHHHHHHHHHHTTHHHHSTTCCC--------------CCCCGGGGGGSHHHHHHHHHHHHHCCCHHHH
T ss_pred hhcccCccHHHHHHHHHHHHHhhccccccccchhhhhhhcccccccccccCchhHHHHhcccHHHHHHHHHccCCCHHHH
Confidence 4678999999999999965210 112233345667888885 5679999
Q ss_pred HHHHHHHHhcccCcc-----hHHHHHhhcCcccccchhhhh-hhhHHHHHHHHHHH------HHHhhhhhHHHHHHHHHH
Q 010291 188 HNAAFALYGLADNED-----NVADFIRVGGVQKLQDGEFIV-QATKDCVAKTLKRL------EEKIHGRVLNHLLYLMRV 255 (513)
Q Consensus 188 ~~a~~~L~~l~~~~~-----~~~~~~~~g~i~~L~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~l~~Lv~lL~~ 255 (513)
++|+++|+|||.... .+..+.+.++++.|+++.... ......+..++.++ ...+..++++.|+.+|.+
T Consensus 327 E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv~LL~s~~~~v~~~A~~aL~nLs~~~~~~~~I~~g~ip~LV~LL~~ 406 (584)
T 3l6x_A 327 EASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPNLVKNLPG 406 (584)
T ss_dssp HHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHcCCccccHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhCChhHHHHHHhCCHHHHHHHhcC
Confidence 999999999987542 222344578888887755532 22333344444444 334577899999999998
Q ss_pred h--------hcchhhhHHHHHhhccC-CCCcceeeecCCchHHHHhhhcCC--CcchhhhHHHHHHHhhhccccccccC
Q 010291 256 A--------EKGVQRRVALALAHLCS-PDDQRTIFIDGGGLELLLGLLGST--NPKQQLDGAVALFKLANKATTLSSVD 323 (513)
Q Consensus 256 ~--------~~~v~~~a~~aL~~l~~-~~~~~~~l~~~~~i~~L~~ll~~~--~~~v~~~a~~~L~~l~~~~~~~~~i~ 323 (513)
+ +.+++..|+++|+|++. ++++++.+.+.|+|+.|++++.+. ++.+++.|+++|+++..+......+.
T Consensus 407 ~~~~~~~~~s~~v~~~a~~tL~NL~a~~~~~~~~I~~~g~I~~Lv~LL~s~~~~~~v~k~Aa~vL~nl~~~~elr~~~k 485 (584)
T 3l6x_A 407 GQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLE 485 (584)
T ss_dssp SSCSGGGTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTCSSSCHHHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred CcccccccchHHHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCCCChHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 6 34678899999999965 566888999999999999999875 88899999999999987766554443
No 11
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=99.97 E-value=2.4e-29 Score=256.94 Aligned_cols=315 Identities=22% Similarity=0.269 Sum_probs=272.3
Q ss_pred CCChhHHHHhhccCC-HHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHH
Q 010291 2 EGGIPPLVELLEFTD-TKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIK 80 (513)
Q Consensus 2 ~g~i~~Lv~lL~~~~-~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~ 80 (513)
.|++|.|+++|++++ +.++..|+++|.+++.++++++..+.+.|+++.|+.+|.++++.++..|+++|++++.+++..+
T Consensus 116 ~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~ 195 (528)
T 4b8j_A 116 SGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCR 195 (528)
T ss_dssp TTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhH
Confidence 589999999999886 9999999999999999889999999999999999999999999999999999999999989999
Q ss_pred HHHHhCCChHHHHHhh-cCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhc
Q 010291 81 KEVLAAGALQPVIGLL-SSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 81 ~~~~~~g~i~~L~~ll-~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~ 159 (513)
..+.+.|+++.|+.++ .+.++.++..++|+|.+++...+... .....|+++.|+.++.++++.++..++++|.+++.+
T Consensus 196 ~~i~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~~-~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~ 274 (528)
T 4b8j_A 196 DLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPS-FEQTRPALPALARLIHSNDEEVLTDACWALSYLSDG 274 (528)
T ss_dssp HHHHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCC-HHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHTSS
T ss_pred HHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCc-HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcC
Confidence 9999999999999999 66789999999999999997754433 344579999999999999999999999999999977
Q ss_pred cccc-hhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccC-cchHHHHHhhcCcccccchhhhh--hhhHHHHHHHHH
Q 010291 160 MHNQ-AGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADN-EDNVADFIRVGGVQKLQDGEFIV--QATKDCVAKTLK 235 (513)
Q Consensus 160 ~~~~-~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~-~~~~~~~~~~g~i~~L~~~~~~~--~~~~~~~~~~~~ 235 (513)
.+.+ ..+.+.|+++.|+.++.++++.++..|+++|++++.. +.....+.+.|+++.|+...... ......+..++.
T Consensus 275 ~~~~~~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~ 354 (528)
T 4b8j_A 275 TNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTIS 354 (528)
T ss_dssp CHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 6654 5677889999999999999999999999999999984 44555677888888887654432 222333333333
Q ss_pred --------HHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCC--CCcceeeecCCchHHHHhhhcCCCcchhhhH
Q 010291 236 --------RLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSP--DDQRTIFIDGGGLELLLGLLGSTNPKQQLDG 305 (513)
Q Consensus 236 --------~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~--~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a 305 (513)
.+..+.+.++++.|+.+|.++++.++..|+++|++++.. ++....+.+.|+++.|+.++.++++.++..+
T Consensus 355 nl~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~~i~~L~~lL~~~d~~v~~~a 434 (528)
T 4b8j_A 355 NITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVC 434 (528)
T ss_dssp HHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHH
T ss_pred HHHCCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHH
Confidence 334566779999999999999999999999999999875 4566678889999999999999999999999
Q ss_pred HHHHHHhhhccc
Q 010291 306 AVALFKLANKAT 317 (513)
Q Consensus 306 ~~~L~~l~~~~~ 317 (513)
+++|.+++....
T Consensus 435 l~~L~~l~~~~~ 446 (528)
T 4b8j_A 435 LEGLENILKVGE 446 (528)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999987644
No 12
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=99.97 E-value=5.9e-29 Score=254.07 Aligned_cols=312 Identities=19% Similarity=0.301 Sum_probs=270.3
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhccCc-hhHHHHHhcCCHHHHHHhhcCCC-HHHHHHHHHHHHHhhcCChhHHH
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAFKND-ENKNQIVECNALPTLILMLRSED-SAIHYEAVGVIGNLVHSSPNIKK 81 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~-~~~~~i~~~g~i~~Lv~lL~~~~-~~v~~~a~~~L~~l~~~~~~~~~ 81 (513)
.++.|++.|.++++.++..|+++|.+++.+.. .....+++.|+++.|+++|.+++ +.++..|+++|++++.+++..+.
T Consensus 75 ~l~~lv~~L~s~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~~~~ 154 (528)
T 4b8j_A 75 SLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTK 154 (528)
T ss_dssp CHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHH
Confidence 48899999999999999999999999976554 67788899999999999999876 99999999999999999899999
Q ss_pred HHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHh-CCCCHHHHHHHHHHHHHHhhcc
Q 010291 82 EVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEML-QSPDVQLREMSAFALGRLAQDM 160 (513)
Q Consensus 82 ~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l-~~~~~~~~~~a~~~L~~l~~~~ 160 (513)
.+.+.|+++.|+.++.+++++++..|+|+|++++..++..+..+.+.|+++.|+.++ .++++.++..++++|.+|+.+.
T Consensus 155 ~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~ 234 (528)
T 4b8j_A 155 VVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGK 234 (528)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSS
T ss_pred HHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999988888889999999999999999 5679999999999999999887
Q ss_pred ccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchH-HHHHhhcCcccccchhhhhh-hhHHHHHHHH----
Q 010291 161 HNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNV-ADFIRVGGVQKLQDGEFIVQ-ATKDCVAKTL---- 234 (513)
Q Consensus 161 ~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~-~~~~~~g~i~~L~~~~~~~~-~~~~~~~~~~---- 234 (513)
+........++++.|+.++.++++.++..++++|++++...... ..+.+.|+++.|+....... .....+..++
T Consensus 235 ~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~ 314 (528)
T 4b8j_A 235 PQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIV 314 (528)
T ss_dssp SCCCHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHH
Confidence 66666667899999999999999999999999999999866554 46668899998876544221 2222222233
Q ss_pred ----HHHHHHhhhhhHHHHHHHHHHh-hcchhhhHHHHHhhccCCCC-cceeeecCCchHHHHhhhcCCCcchhhhHHHH
Q 010291 235 ----KRLEEKIHGRVLNHLLYLMRVA-EKGVQRRVALALAHLCSPDD-QRTIFIDGGGLELLLGLLGSTNPKQQLDGAVA 308 (513)
Q Consensus 235 ----~~~~~~~~~~~l~~Lv~lL~~~-~~~v~~~a~~aL~~l~~~~~-~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~ 308 (513)
.....+.+.++++.|+.+|.++ ++.++..|+++|+|++.+.. ....+.+.|+++.|+.++.++++.++..|+++
T Consensus 315 ~~~~~~~~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~a 394 (528)
T 4b8j_A 315 TGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWA 394 (528)
T ss_dssp TSCHHHHHHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHH
Confidence 2334566789999999999998 99999999999999987543 45577788999999999999999999999999
Q ss_pred HHHhhhc
Q 010291 309 LFKLANK 315 (513)
Q Consensus 309 L~~l~~~ 315 (513)
|.+++..
T Consensus 395 L~nl~~~ 401 (528)
T 4b8j_A 395 ISNATSG 401 (528)
T ss_dssp HHHHHHH
T ss_pred HHHHHcC
Confidence 9999876
No 13
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.97 E-value=1.7e-30 Score=223.55 Aligned_cols=147 Identities=34% Similarity=0.522 Sum_probs=136.0
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecCCCCHHHHHHHHHHHhcCccccCHHHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIA 416 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~~~ 416 (513)
..++.++.++|+++.++|+.|++||.||+++|+||++||.++|+|+....|.++++++++|+.+++|+|+|.++++.+++
T Consensus 26 ~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~~~~~~~ 105 (172)
T 3htm_A 26 GGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMA 105 (172)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHHSCCTTGGGTH
T ss_pred HHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhCCCCCCcHHHH
Confidence 56778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHhcCChhhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHhhCchh
Q 010291 417 QDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLSTRPG 483 (513)
Q Consensus 417 ~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~ 483 (513)
.+++.+|++|+++.|++.|+++|.+.++.+||+.++.+|..|++++|++.|.+||.+||.++.++++
T Consensus 106 ~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~~ 172 (172)
T 3htm_A 106 DDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETSG 172 (172)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999988764
No 14
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=99.97 E-value=1.2e-29 Score=261.94 Aligned_cols=314 Identities=17% Similarity=0.133 Sum_probs=261.1
Q ss_pred CCChhHHHHhhccCCHHHHHHHHHHHHHhhccCc-----------------------------hhH---HHHHhcCCHHH
Q 010291 2 EGGIPPLVELLEFTDTKVQRAAAGALRTLAFKND-----------------------------ENK---NQIVECNALPT 49 (513)
Q Consensus 2 ~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~-----------------------------~~~---~~i~~~g~i~~ 49 (513)
.|++|.|+++|+++++.++..|+++|.|++.+.+ ..+ ..+++.|+++.
T Consensus 420 ~g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~ 499 (810)
T 3now_A 420 KASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITTA 499 (810)
T ss_dssp HHHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred cchHHHHHHHhCCCChHHHHHHHHHHHHHcCCchhhhhhHHHHHHHHHhhccCccccccccHHHHHHHHHHHHHCcCHHH
Confidence 4789999999999999999999999999998542 122 67889999999
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHH--HHh
Q 010291 50 LILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVH--IVQ 127 (513)
Q Consensus 50 Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~--~~~ 127 (513)
|+++|+++++.+++.|+|+|+|++.+ +++|..+++.|+++.|+.++.++++..++.|+|+|.|++....+.... ...
T Consensus 500 LV~LL~s~s~~vqe~Aa~aL~NLA~d-~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~~ 578 (810)
T 3now_A 500 LCALAKTESHNSQELIARVLNAVCGL-KELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSGQRS 578 (810)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHTS-HHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHTTTHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCCChhhhhcchhh
Confidence 99999999999999999999999975 678999999999999999999999999999999999998653322110 012
Q ss_pred cCChHHHHHHhCCC-CHHHHHHHHHHHHHHhhcc-ccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHH
Q 010291 128 RGAVRPLIEMLQSP-DVQLREMSAFALGRLAQDM-HNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVA 205 (513)
Q Consensus 128 ~~~i~~L~~~l~~~-~~~~~~~a~~~L~~l~~~~-~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~ 205 (513)
.|++++|+.+|.++ +...+..|+++|.||+..+ +.+..+++.|+++.|+.++.++++.++..|+++|+||+.+++.+.
T Consensus 579 ~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~~~~~~~ 658 (810)
T 3now_A 579 LDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVMSEDVIK 658 (810)
T ss_dssp HHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTTSHHHHH
T ss_pred hcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCChHHHH
Confidence 36999999999876 4455678999999999875 567889999999999999999999999999999999999988888
Q ss_pred HHHh-hcCcccccchhhhhh-hhHHHHHHHH--------HHHHHHhh-hhhHHHHHHHHHHhhcchhhhHHHHHhhccCC
Q 010291 206 DFIR-VGGVQKLQDGEFIVQ-ATKDCVAKTL--------KRLEEKIH-GRVLNHLLYLMRVAEKGVQRRVALALAHLCSP 274 (513)
Q Consensus 206 ~~~~-~g~i~~L~~~~~~~~-~~~~~~~~~~--------~~~~~~~~-~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~ 274 (513)
.+.. .|.++.|+.+..+.. .....+.+++ ...+.+.+ .++++.|+.+|++++.++|..|+|++.|++..
T Consensus 659 ~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~~ 738 (810)
T 3now_A 659 MFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMINA 738 (810)
T ss_dssp HHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHTT
T ss_pred HHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHCCCCHHHHHHHHHHHHHHHhC
Confidence 8885 677887766444322 2222222322 34455666 89999999999999999999999999999764
Q ss_pred -CCcceeeecCCchHHHHhhhcCC---CcchhhhHHHHHHHhhhcc
Q 010291 275 -DDQRTIFIDGGGLELLLGLLGST---NPKQQLDGAVALFKLANKA 316 (513)
Q Consensus 275 -~~~~~~l~~~~~i~~L~~ll~~~---~~~v~~~a~~~L~~l~~~~ 316 (513)
++....+.+.|+++.|.++++.+ ++++.+.|..+|.++....
T Consensus 739 s~e~~~~l~e~G~i~~L~~LL~~~d~~~~~i~e~Al~aL~~ll~~g 784 (810)
T 3now_A 739 GEEIAKKLFETDIMELLSGLGQLPDDTRAKAREVATQCLAAAERYR 784 (810)
T ss_dssp CHHHHHHHHTSTHHHHHTTSCCCTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCHHHHHHHHhCcccCcHHHHHHHHHHHHHHHhCC
Confidence 44678899999999999999754 7889999999999997653
No 15
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=99.97 E-value=9.6e-30 Score=262.70 Aligned_cols=309 Identities=20% Similarity=0.223 Sum_probs=255.5
Q ss_pred hhHHHHhhccC--CHHHHHHHHHHHHHhhccCchhHHHHH-hcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCCh----
Q 010291 5 IPPLVELLEFT--DTKVQRAAAGALRTLAFKNDENKNQIV-ECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSP---- 77 (513)
Q Consensus 5 i~~Lv~lL~~~--~~~~~~~a~~~L~~l~~~~~~~~~~i~-~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~---- 77 (513)
++.++++|.++ +++++..|+++|.+++. .++.+..++ +.|+++.|+++|+++++.++..|+++|+|++.+.+
T Consensus 379 v~~l~~lL~~~~~d~~v~~~AveaLayLS~-~~~vk~~lv~d~g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~ 457 (810)
T 3now_A 379 AEACRRFLIKPGKDKDIRRWAADGLAYLTL-DAECKEKLIEDKASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEM 457 (810)
T ss_dssp HHHHHHHHHCSSCCSSHHHHHHHHHHHHTT-SHHHHHHHHHCHHHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCC
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHhC-CcHHHHHHHHccchHHHHHHHhCCCChHHHHHHHHHHHHHcCCchhhhh
Confidence 45677888887 88999999999999998 677777777 47999999999999999999999999999998642
Q ss_pred -------------------------hHH---HHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcC
Q 010291 78 -------------------------NIK---KEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRG 129 (513)
Q Consensus 78 -------------------------~~~---~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~ 129 (513)
..+ +.+++.|+++.|+.++.++++++++.|+|+|.|++ .+++++..+++.|
T Consensus 458 ~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA-~d~~~r~~Vv~~G 536 (810)
T 3now_A 458 LPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITTALCALAKTESHNSQELIARVLNAVC-GLKELRGKVVQEG 536 (810)
T ss_dssp CCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHH-TSHHHHHHHHHTT
T ss_pred hHHHHHHHHHhhccCccccccccHHHHHHHHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHc-CCHHHHHHHHHCC
Confidence 123 67889999999999999999999999999999998 5577899999999
Q ss_pred ChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccchhh---HhcCChHHHHHHhcCCC-HHHHHHHHHHHHhcccC-cchH
Q 010291 130 AVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQAGI---AHNGGLVPLLKLLDSKN-GSLQHNAAFALYGLADN-EDNV 204 (513)
Q Consensus 130 ~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~---~~~~~i~~L~~ll~~~~-~~~~~~a~~~L~~l~~~-~~~~ 204 (513)
++++|+.+++++++..++.|+|+|.|++.+......+ ...+++++|+.+|.++. ...+..|+++|.||+.. ++.+
T Consensus 537 aip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~ 616 (810)
T 3now_A 537 GVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVR 616 (810)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred CHHHHHHHHccCCHHHHHHHHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHH
Confidence 9999999999999999999999999999754433222 12469999999998663 34557899999999986 4677
Q ss_pred HHHHhhcCcccccchhhhhh-hhHHHHHHHHHH-------HHHHhh-hhhHHHHHHHHHHhhcchhhhHHHHHhhccC-C
Q 010291 205 ADFIRVGGVQKLQDGEFIVQ-ATKDCVAKTLKR-------LEEKIH-GRVLNHLLYLMRVAEKGVQRRVALALAHLCS-P 274 (513)
Q Consensus 205 ~~~~~~g~i~~L~~~~~~~~-~~~~~~~~~~~~-------~~~~~~-~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~-~ 274 (513)
..+++.|+++.|+....... ....-...++.+ .....+ .+.++.|+.++.+++..+|..|+|+|+|++. +
T Consensus 617 ~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s 696 (810)
T 3now_A 617 QRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVS 696 (810)
T ss_dssp HHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTTSHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCChHHHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCC
Confidence 78889999999887555322 222222222222 222333 6899999999999999999999999999998 4
Q ss_pred CCcceeeec-CCchHHHHhhhcCCCcchhhhHHHHHHHhhhc
Q 010291 275 DDQRTIFID-GGGLELLLGLLGSTNPKQQLDGAVALFKLANK 315 (513)
Q Consensus 275 ~~~~~~l~~-~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~ 315 (513)
+...+.+++ .|+++.|++++.++++++|..|+|++.|++.+
T Consensus 697 ~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~~ 738 (810)
T 3now_A 697 VKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMINA 738 (810)
T ss_dssp HHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHCCCCHHHHHHHHHHHHHHHhC
Confidence 556666777 89999999999999999999999999999874
No 16
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=99.96 E-value=1.8e-28 Score=250.47 Aligned_cols=316 Identities=20% Similarity=0.225 Sum_probs=270.3
Q ss_pred CCChhHHHHhhccC-CHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHH
Q 010291 2 EGGIPPLVELLEFT-DTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIK 80 (513)
Q Consensus 2 ~g~i~~Lv~lL~~~-~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~ 80 (513)
.|++|.|+++|+++ ++.++..|+++|.+++.++++.+..+.+.|+++.|+.+|.++++.++..|+++|++++.+++..+
T Consensus 129 ~g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~ 208 (530)
T 1wa5_B 129 AGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYR 208 (530)
T ss_dssp TTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccch
Confidence 58999999999987 89999999999999999888899999999999999999999999999999999999999888899
Q ss_pred HHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhcc
Q 010291 81 KEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDM 160 (513)
Q Consensus 81 ~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~ 160 (513)
..+...|+++.|+.++.+.+.+++..++|+|.+++.+...........++++.|+.++.++++.++..++++|.+++...
T Consensus 209 ~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~ 288 (530)
T 1wa5_B 209 DYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGP 288 (530)
T ss_dssp HHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999775333445566899999999999999999999999999999765
Q ss_pred c-cchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCc-chHHHHHhhcCcccccchhhhh-hhhHHHHHHHHH--
Q 010291 161 H-NQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNE-DNVADFIRVGGVQKLQDGEFIV-QATKDCVAKTLK-- 235 (513)
Q Consensus 161 ~-~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~-~~~~~~~~~g~i~~L~~~~~~~-~~~~~~~~~~~~-- 235 (513)
+ ....+.+.|+++.|+.++.++++.++..++++|++++... .....+...|+++.|+...... ......+..++.
T Consensus 289 ~~~~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l 368 (530)
T 1wa5_B 289 QEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNI 368 (530)
T ss_dssp HHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 4 4566777899999999999999999999999999999754 4455566788888876644322 222223333333
Q ss_pred ------HHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCC--C--CcceeeecCCchHHHHhhhcCCCcchhhhH
Q 010291 236 ------RLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSP--D--DQRTIFIDGGGLELLLGLLGSTNPKQQLDG 305 (513)
Q Consensus 236 ------~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~--~--~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a 305 (513)
.+..+.+.++++.|+.+|.++++.++..|+++|++++.. + +....+.+.|+++.|+.++.+.++.++..+
T Consensus 369 ~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~l~~~~~l~~L~~ll~~~~~~v~~~a 448 (530)
T 1wa5_B 369 TAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVT 448 (530)
T ss_dssp TTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHH
Confidence 334456788999999999999999999999999999863 3 455667789999999999999999999999
Q ss_pred HHHHHHhhhccc
Q 010291 306 AVALFKLANKAT 317 (513)
Q Consensus 306 ~~~L~~l~~~~~ 317 (513)
+++|.+++....
T Consensus 449 l~aL~~l~~~~~ 460 (530)
T 1wa5_B 449 LDALENILKMGE 460 (530)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh
Confidence 999999987644
No 17
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.96 E-value=2e-30 Score=240.74 Aligned_cols=159 Identities=23% Similarity=0.408 Sum_probs=142.8
Q ss_pred hhcccCCCcccEEEEec---CeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecC------CCCHHHHHHHHHHHhcC
Q 010291 337 DQFVNNATLSDVTFLVE---GRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIP------NIRWEVFELMMRFIYTG 407 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~---~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~------~~~~~~~~~~l~~~Y~~ 407 (513)
+.++.++.++||++.++ |+.|++||.||+++|+||++||+++|+|+....|.++ ++++++|+.+++|+|||
T Consensus 24 ~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg 103 (279)
T 3i3n_A 24 NEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTG 103 (279)
T ss_dssp HHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHS
T ss_pred HHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcC
Confidence 45778899999999998 8999999999999999999999999999999999998 89999999999999999
Q ss_pred ccccCHHHHHHHHHHHHHhcHHHHHHHHHHHHHhcCChhhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHhhCchhhHhh
Q 010291 408 SVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLSTRPGHSNL 487 (513)
Q Consensus 408 ~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~f~~l 487 (513)
.+.++.+++.+++.+|++|++++|++.|+++|.+.++++||+.++.+|+.|+++.|.+.|.+||.+||.++..+++|.+|
T Consensus 104 ~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L 183 (279)
T 3i3n_A 104 RIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTL 183 (279)
T ss_dssp EEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGS
T ss_pred CcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHH
Q 010291 488 IQRIIPEI 495 (513)
Q Consensus 488 ~~~~~~~l 495 (513)
+.+.+.++
T Consensus 184 ~~~~l~~l 191 (279)
T 3i3n_A 184 PFHLIRDW 191 (279)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 76544433
No 18
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=99.96 E-value=3.8e-28 Score=248.03 Aligned_cols=314 Identities=18% Similarity=0.253 Sum_probs=268.4
Q ss_pred CCChhHHHHhhccCCHHHHHHHHHHHHHhhccC-chhHHHHHhcCCHHHHHHhhcCC-CHHHHHHHHHHHHHhhcCChhH
Q 010291 2 EGGIPPLVELLEFTDTKVQRAAAGALRTLAFKN-DENKNQIVECNALPTLILMLRSE-DSAIHYEAVGVIGNLVHSSPNI 79 (513)
Q Consensus 2 ~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~-~~~~~~i~~~g~i~~Lv~lL~~~-~~~v~~~a~~~L~~l~~~~~~~ 79 (513)
.+.++.+++.|+++++.++..|+..|.++.... ......+++.|+++.|+++|.++ ++.++..|+++|++++.+++..
T Consensus 86 ~~~i~~lv~~L~s~~~~~~~~A~~~L~~ll~~~~~~~~~~~~~~g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~ 165 (530)
T 1wa5_B 86 QQELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQ 165 (530)
T ss_dssp -CCHHHHHHHHSCSSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHH
Confidence 367899999999999999999999999997642 44567788999999999999987 8999999999999999988888
Q ss_pred HHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhc
Q 010291 80 KKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 80 ~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~ 159 (513)
+..+++.|+++.|+.++.+++++++..|+++|++++..++..+..+...|+++.|+.++.++++.++..++++|.+|+.+
T Consensus 166 ~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~ 245 (530)
T 1wa5_B 166 TKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRG 245 (530)
T ss_dssp HHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCC
Confidence 89999999999999999999999999999999999988888888889999999999999999999999999999999987
Q ss_pred c-ccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCc-chHHHHHhhcCcccccchhhhhh-hhHHHHHHHHHH
Q 010291 160 M-HNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNE-DNVADFIRVGGVQKLQDGEFIVQ-ATKDCVAKTLKR 236 (513)
Q Consensus 160 ~-~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~-~~~~~~~~~g~i~~L~~~~~~~~-~~~~~~~~~~~~ 236 (513)
. +........++++.|+.++.++++.++..++++|.+|+... +....+.+.|+++.|+....... .....+..++.+
T Consensus 246 ~~~~~~~~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~ 325 (530)
T 1wa5_B 246 KKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGN 325 (530)
T ss_dssp SSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHH
Confidence 6 55556667899999999999999999999999999999754 45666778899988876544221 112222222222
Q ss_pred --------HHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCC-CcceeeecCCchHHHHhhhcCCCcchhhhHHH
Q 010291 237 --------LEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPD-DQRTIFIDGGGLELLLGLLGSTNPKQQLDGAV 307 (513)
Q Consensus 237 --------~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~-~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~ 307 (513)
...+.+.++++.|+.+|.++++.++..|+++|++++... +....+.+.|+++.|+.++.++++.++..|++
T Consensus 326 l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~ 405 (530)
T 1wa5_B 326 IVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACW 405 (530)
T ss_dssp HTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcchHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHH
Confidence 234466789999999999999999999999999999754 34556778899999999999999999999999
Q ss_pred HHHHhhhc
Q 010291 308 ALFKLANK 315 (513)
Q Consensus 308 ~L~~l~~~ 315 (513)
+|.+++..
T Consensus 406 aL~~l~~~ 413 (530)
T 1wa5_B 406 AISNASSG 413 (530)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999875
No 19
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=99.96 E-value=5.9e-28 Score=241.78 Aligned_cols=314 Identities=19% Similarity=0.217 Sum_probs=265.2
Q ss_pred CChhHHHHhhccC-CHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHH
Q 010291 3 GGIPPLVELLEFT-DTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 81 (513)
Q Consensus 3 g~i~~Lv~lL~~~-~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 81 (513)
|+++.|+++|+++ ++.++..|+++|.+++.++++....+.+.|+++.|+++|+++++.+|..|+++|++++.+++..+.
T Consensus 64 ~~i~~L~~~L~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~ 143 (450)
T 2jdq_A 64 GVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRD 143 (450)
T ss_dssp THHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CcHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHH
Confidence 7899999999988 899999999999999998888888889999999999999999999999999999999999888999
Q ss_pred HHHhCCChHHHHHhhcC-CChHHHHHHHHHHHHhhcCC-chhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhc
Q 010291 82 EVLAAGALQPVIGLLSS-CCSESQREAALLLGQFAATD-SDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 82 ~~~~~g~i~~L~~ll~~-~~~~~~~~a~~~L~~l~~~~-~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~ 159 (513)
.+.+.|+++.|+.++.+ .+.+++..++++|++++... +.....+. .++++.|+.++.++++.++..++++|.+++.+
T Consensus 144 ~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~-~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~ 222 (450)
T 2jdq_A 144 YVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKV-SPCLNVLSWLLFVSDTDVLADACWALSYLSDG 222 (450)
T ss_dssp HHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGGT-GGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSS
T ss_pred HHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHH-HHHHHHHHHHHccCCHHHHHHHHHHHHHHHCC
Confidence 99999999999999996 68999999999999999765 43333333 78999999999999999999999999999976
Q ss_pred c-ccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcch-HHHHHhhcCcccccchhhhh-hhhHHHHHHHHH-
Q 010291 160 M-HNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDN-VADFIRVGGVQKLQDGEFIV-QATKDCVAKTLK- 235 (513)
Q Consensus 160 ~-~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~-~~~~~~~g~i~~L~~~~~~~-~~~~~~~~~~~~- 235 (513)
. +.+..+...|+++.|+.++.++++.++..++++|++++...+. ...+.+.|+++.|+...... ......+..++.
T Consensus 223 ~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~ 302 (450)
T 2jdq_A 223 PNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISN 302 (450)
T ss_dssp SHHHHHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 5 4456677889999999999999999999999999999986544 34466778888776644321 122222223332
Q ss_pred -------HHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCC--CCcceeeecCCchHHHHhhhcCCCcchhhhHH
Q 010291 236 -------RLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSP--DDQRTIFIDGGGLELLLGLLGSTNPKQQLDGA 306 (513)
Q Consensus 236 -------~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~--~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~ 306 (513)
....+.+.++++.|+.+|+++++.+|..|+++|++++.. ++....+.+.|+++.|++++.++++.++..++
T Consensus 303 l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~ 382 (450)
T 2jdq_A 303 ITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVAL 382 (450)
T ss_dssp HTTSCHHHHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGSSCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHhcCCCHHHHHHHH
Confidence 334456679999999999999999999999999999864 34555667889999999999999999999999
Q ss_pred HHHHHhhhccc
Q 010291 307 VALFKLANKAT 317 (513)
Q Consensus 307 ~~L~~l~~~~~ 317 (513)
++|.+++....
T Consensus 383 ~aL~~l~~~~~ 393 (450)
T 2jdq_A 383 NGLENILRLGE 393 (450)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhch
Confidence 99999987644
No 20
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.96 E-value=3.3e-28 Score=242.42 Aligned_cols=271 Identities=18% Similarity=0.192 Sum_probs=228.2
Q ss_pred CHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHH
Q 010291 46 ALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHI 125 (513)
Q Consensus 46 ~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~ 125 (513)
.++.++.+|++++++++..|+++|.+++.+++..+..+.+.|+++.|+.+|.+++++++..|+++|.||+.++++++..+
T Consensus 3 ~l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i 82 (457)
T 1xm9_A 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 58999999999999999999999999998888888899999999999999999999999999999999998878999999
Q ss_pred HhcCChHHHHHHhC-CCCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhc--------C--------CCHHHHH
Q 010291 126 VQRGAVRPLIEMLQ-SPDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLD--------S--------KNGSLQH 188 (513)
Q Consensus 126 ~~~~~i~~L~~~l~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~--------~--------~~~~~~~ 188 (513)
++.|+++.|+++|+ ++++++++.++|+|+||+.+++.+..+++ |+++.|++++. + .+..+..
T Consensus 83 ~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~ 161 (457)
T 1xm9_A 83 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 161 (457)
T ss_dssp HHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHH-HHHHHHHHHTTHHHHTCC---------CCCHHHHH
T ss_pred HHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHHHHHh-ccHHHHHHHHhccccccccCccchhcccccHHHHH
Confidence 99999999999999 78999999999999999999888888888 99999999993 2 2456777
Q ss_pred HHHHHHHhcccCcchHHHHHhh-cCcccccchhhhh--------hhhHHHH--HHHH-----------------------
Q 010291 189 NAAFALYGLADNEDNVADFIRV-GGVQKLQDGEFIV--------QATKDCV--AKTL----------------------- 234 (513)
Q Consensus 189 ~a~~~L~~l~~~~~~~~~~~~~-g~i~~L~~~~~~~--------~~~~~~~--~~~~----------------------- 234 (513)
.|+++|+|||.+++++..+.+. |+++.|+...... .....|+ ..++
T Consensus 162 ~a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~~~~~e~a~~~L~nLs~~~~~~~~~~~~~~~~~~~~~~ 241 (457)
T 1xm9_A 162 NATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAY 241 (457)
T ss_dssp HHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC----
T ss_pred HHHHHHHHHccCHHHHHHHHHcCCCHHHHHHHHHhhccccCCchHHHHHHHHHHHhcccchhccCcchhhhccccccccc
Confidence 9999999999988788888887 9999887654421 1111111 1110
Q ss_pred --------------------------------HHHHHHhhhhhHHHHHHHHHH-hhcchhhhHHHHHhhccCCCCc----
Q 010291 235 --------------------------------KRLEEKIHGRVLNHLLYLMRV-AEKGVQRRVALALAHLCSPDDQ---- 277 (513)
Q Consensus 235 --------------------------------~~~~~~~~~~~l~~Lv~lL~~-~~~~v~~~a~~aL~~l~~~~~~---- 277 (513)
+..+.+++.++++.|+.+|++ .++.+++.|+|+|+|+|.+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~L~~lL~~~~~~~~~e~a~~aL~nl~~~~~~~~~~ 321 (457)
T 1xm9_A 242 TEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSG 321 (457)
T ss_dssp ------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHHHH
T ss_pred ccccccchhhccchhhhhccccCCccccccCchHHHHHhCcchHHHHHHHHhhcCCHHHHHHHHHHHHHhccCcCcchHH
Confidence 011234567889999999988 4688999999999999986532
Q ss_pred --ceeeecCCchHHHHhhhcCCCcchhhhHHHHHHHhhhccc
Q 010291 278 --RTIFIDGGGLELLLGLLGSTNPKQQLDGAVALFKLANKAT 317 (513)
Q Consensus 278 --~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 317 (513)
+..+.+.|++|.|++++.+++++++..|+|+|.+++.+..
T Consensus 322 ~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nls~~~~ 363 (457)
T 1xm9_A 322 MSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 363 (457)
T ss_dssp HHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHcCCchHHHHHHhCCCHhHHHHHHHHHHHHhcCHH
Confidence 3345578999999999999999999999999999987643
No 21
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.96 E-value=2.5e-28 Score=232.25 Aligned_cols=243 Identities=21% Similarity=0.251 Sum_probs=211.7
Q ss_pred CCChhHHHHhhcc-----------CCHHHHHHHHHHHHHhhccCchhHHHHHhc-CCHHHHHHhhcCCCHHHHHHHHHHH
Q 010291 2 EGGIPPLVELLEF-----------TDTKVQRAAAGALRTLAFKNDENKNQIVEC-NALPTLILMLRSEDSAIHYEAVGVI 69 (513)
Q Consensus 2 ~g~i~~Lv~lL~~-----------~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~-g~i~~Lv~lL~~~~~~v~~~a~~~L 69 (513)
.|+++.|+.+|.+ .++.+|.+|+++|.+++.+++.++..+... |+|+.|+++|+++++++++.|+++|
T Consensus 72 ~G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL 151 (354)
T 3nmw_A 72 LGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVL 151 (354)
T ss_dssp TTHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCcHHHHHHHHCCCCHHHHHHHHHHH
Confidence 5899999999953 247899999999999999777788888654 5599999999999999999999999
Q ss_pred HHhhcC-ChhHHHHHHhCCChHHHHHhh-cCCChHHHHHHHHHHHHhhcCCchhhHHHH-hcCChHHHHHHhCCCCH---
Q 010291 70 GNLVHS-SPNIKKEVLAAGALQPVIGLL-SSCCSESQREAALLLGQFAATDSDCKVHIV-QRGAVRPLIEMLQSPDV--- 143 (513)
Q Consensus 70 ~~l~~~-~~~~~~~~~~~g~i~~L~~ll-~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~-~~~~i~~L~~~l~~~~~--- 143 (513)
++|+.. ++.++..+.+.|+++.|+++| ++.+.++++.|+++|+||+..+++++..+. ..|+++.|+.++.++++
T Consensus 152 ~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~ 231 (354)
T 3nmw_A 152 RNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNT 231 (354)
T ss_dssp HHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSC
T ss_pred HHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCccc
Confidence 999985 678899999999999999974 667889999999999999976667677776 78999999999997654
Q ss_pred -HHHHHHHHHHHHHhh----ccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhccc-CcchHHHHHhhcCccccc
Q 010291 144 -QLREMSAFALGRLAQ----DMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLAD-NEDNVADFIRVGGVQKLQ 217 (513)
Q Consensus 144 -~~~~~a~~~L~~l~~----~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~-~~~~~~~~~~~g~i~~L~ 217 (513)
++++.|+++|+||+. +++++..+.+.|+++.|+++|.+++..+++.|+++|+|++. +++++..+.
T Consensus 232 ~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~--------- 302 (354)
T 3nmw_A 232 LAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALW--------- 302 (354)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHH---------
Confidence 599999999999996 67778889999999999999999999999999999999995 555555554
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCc
Q 010291 218 DGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQ 277 (513)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~ 277 (513)
+.|+++.|+.+|++++..+++.|+++|.||+...+.
T Consensus 303 ------------------------~~G~i~~Lv~LL~s~~~~i~~~A~~aL~nL~~~~~~ 338 (354)
T 3nmw_A 303 ------------------------DMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRPA 338 (354)
T ss_dssp ------------------------HTTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCCG
T ss_pred ------------------------HCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCHH
Confidence 455788899999999999999999999999876553
No 22
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.96 E-value=1.7e-27 Score=218.85 Aligned_cols=241 Identities=28% Similarity=0.370 Sum_probs=221.0
Q ss_pred CChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 3 GGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 3 g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
|+++.|+++|++++++++..|+++|.+++.++++++..+.+.|+++.|+++|++++++++..|+++|++++.+++..+..
T Consensus 2 ~~i~~L~~~L~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 81 (252)
T 4hxt_A 2 NDVEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKA 81 (252)
T ss_dssp CHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred CcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHH
Confidence 67999999999999999999999999999988889999999999999999999999999999999999999988999999
Q ss_pred HHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhcccc
Q 010291 83 VLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHN 162 (513)
Q Consensus 83 ~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~ 162 (513)
+.+.|+++.|+.++.+++++++..++++|.+++..+++.+..+.+.|+++.|+++++++++.++..++++|++++.+.+.
T Consensus 82 ~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~ 161 (252)
T 4hxt_A 82 IVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDE 161 (252)
T ss_dssp HHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHH
Confidence 99999999999999999999999999999999988888899999999999999999999999999999999999986554
Q ss_pred -chhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcch-HHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHH
Q 010291 163 -QAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDN-VADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEK 240 (513)
Q Consensus 163 -~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~-~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~ 240 (513)
+..+.+.|+++.|+.++.++++.++..++++|++++..... ... +
T Consensus 162 ~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~---------------------------------l 208 (252)
T 4hxt_A 162 AIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKA---------------------------------I 208 (252)
T ss_dssp HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHH---------------------------------H
T ss_pred HHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHH---------------------------------H
Confidence 46788899999999999999999999999999999974433 222 2
Q ss_pred hhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCC
Q 010291 241 IHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDD 276 (513)
Q Consensus 241 ~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~ 276 (513)
.+.++++.|+.+++++++.++..|+++|+|++....
T Consensus 209 ~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 244 (252)
T 4hxt_A 209 VDAGGVEVLQKLLTSTDSEVQKEAQRALENIKSGGW 244 (252)
T ss_dssp HHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHTCB
T ss_pred HHCCCHHHHHHHHCCCcHHHHHHHHHHHHHHHcCCC
Confidence 356688999999999999999999999999986544
No 23
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=99.95 E-value=1.5e-26 Score=231.61 Aligned_cols=311 Identities=17% Similarity=0.258 Sum_probs=259.0
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhc--cCchhHHHHHhc-CCHHHHHHhhcCC-CHHHHHHHHHHHHHhhcCChhH
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAF--KNDENKNQIVEC-NALPTLILMLRSE-DSAIHYEAVGVIGNLVHSSPNI 79 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~--~~~~~~~~i~~~-g~i~~Lv~lL~~~-~~~v~~~a~~~L~~l~~~~~~~ 79 (513)
.++.+++.|+++++.+|..|+..|+++.. .++.. ..+++. |+++.|+++|+++ ++.++..|+++|.+++.++++.
T Consensus 21 ~l~~l~~~l~s~~~~~r~~A~~~L~~l~~~~~~~~~-~~~~~~~~~i~~L~~~L~~~~~~~v~~~a~~~L~~l~~~~~~~ 99 (450)
T 2jdq_A 21 ITSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPI-DEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQ 99 (450)
T ss_dssp -CHHHHHHHHSSCHHHHHHHHHHHHHHHHSSSSCCH-HHHHTSTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHH
T ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcH-HHHHHcCCcHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHH
Confidence 38899999999999999999999999864 23333 445666 9999999999987 8999999999999999987888
Q ss_pred HHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCC-CCHHHHHHHHHHHHHHhh
Q 010291 80 KKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQS-PDVQLREMSAFALGRLAQ 158 (513)
Q Consensus 80 ~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~-~~~~~~~~a~~~L~~l~~ 158 (513)
...+.+.|+++.|+.++.+++++++..|+++|++++..++..+..+.+.|+++.|+.++++ +++.++..++++|++++.
T Consensus 100 ~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~ 179 (450)
T 2jdq_A 100 TRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCR 179 (450)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhC
Confidence 8888899999999999999999999999999999998888888888999999999999996 689999999999999997
Q ss_pred cc-ccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCc-chHHHHHhhcCcccccchhhhh-hhhHHHHHHHHH
Q 010291 159 DM-HNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNE-DNVADFIRVGGVQKLQDGEFIV-QATKDCVAKTLK 235 (513)
Q Consensus 159 ~~-~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~-~~~~~~~~~g~i~~L~~~~~~~-~~~~~~~~~~~~ 235 (513)
+. +........++++.|++++.++++.++..++++|.+++.+. +....+...|+++.|+...... ......+..++.
T Consensus 180 ~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~ 259 (450)
T 2jdq_A 180 GKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVG 259 (450)
T ss_dssp CSSSCCCGGGTGGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHH
Confidence 65 33222223789999999999999999999999999999854 5556667888888887644321 111222222332
Q ss_pred H--------HHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCC-CcceeeecCCchHHHHhhhcCCCcchhhhHH
Q 010291 236 R--------LEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPD-DQRTIFIDGGGLELLLGLLGSTNPKQQLDGA 306 (513)
Q Consensus 236 ~--------~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~-~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~ 306 (513)
+ .+.+.+.++++.|+.+|+++++.++..|+++|++++.+. +....+.+.|+++.|++++.++++.+|..|+
T Consensus 260 ~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~ 339 (450)
T 2jdq_A 260 NIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAA 339 (450)
T ss_dssp HHTTSCHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHhhCChHHHHHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHH
Confidence 2 233456789999999999999999999999999999754 4555677789999999999999999999999
Q ss_pred HHHHHhhhc
Q 010291 307 VALFKLANK 315 (513)
Q Consensus 307 ~~L~~l~~~ 315 (513)
++|.+++..
T Consensus 340 ~~L~~l~~~ 348 (450)
T 2jdq_A 340 WAITNATSG 348 (450)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHcC
Confidence 999999875
No 24
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.95 E-value=1e-26 Score=213.78 Aligned_cols=238 Identities=24% Similarity=0.356 Sum_probs=213.0
Q ss_pred CChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 3 GGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 3 g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
...+.++++|++++++++..|+++|.++...+++.+..+.+.|+++.|+++|+++++.++..|+++|++++.+++..+..
T Consensus 12 ~~~~~~~~~L~s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 91 (252)
T 4db8_A 12 SELPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 91 (252)
T ss_dssp CSHHHHHHHHHSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred chHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 35788999999999999999999998876657788889999999999999999999999999999999999988999999
Q ss_pred HHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhcc-c
Q 010291 83 VLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDM-H 161 (513)
Q Consensus 83 ~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~-~ 161 (513)
+.+.|+++.|+.++.+++++++..|+++|.|++...+.....+.+.|+++.|+++++++++.++..++++|++++.+. .
T Consensus 92 i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~ 171 (252)
T 4db8_A 92 VIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE 171 (252)
T ss_dssp HHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChH
Confidence 999999999999999999999999999999999776555488899999999999999999999999999999999765 4
Q ss_pred cchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCc-chHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHH
Q 010291 162 NQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNE-DNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEK 240 (513)
Q Consensus 162 ~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~-~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~ 240 (513)
.+..+.+.|+++.|++++.++++.++..++++|++++... +....+
T Consensus 172 ~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~--------------------------------- 218 (252)
T 4db8_A 172 QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAV--------------------------------- 218 (252)
T ss_dssp HHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHH---------------------------------
T ss_pred HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHH---------------------------------
Confidence 4566788999999999999999999999999999999644 333333
Q ss_pred hhhhhHHHHHHHHHHhhcchhhhHHHHHhhccC
Q 010291 241 IHGRVLNHLLYLMRVAEKGVQRRVALALAHLCS 273 (513)
Q Consensus 241 ~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~ 273 (513)
.+.++++.|+.+++++++.++..|+++|.+++.
T Consensus 219 ~~~g~i~~L~~ll~~~~~~v~~~A~~~L~~l~~ 251 (252)
T 4db8_A 219 KEAGALEKLEQLQSHENEKIQKEAQEALEKLQS 251 (252)
T ss_dssp HHTTHHHHHHTTTTCSSSHHHHTHHHHHHTTC-
T ss_pred HHCCcHHHHHHHhCCCCHHHHHHHHHHHHHHhc
Confidence 345688899999999999999999999999975
No 25
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.95 E-value=7.3e-27 Score=214.69 Aligned_cols=243 Identities=29% Similarity=0.372 Sum_probs=219.8
Q ss_pred CCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHH
Q 010291 45 NALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVH 124 (513)
Q Consensus 45 g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~ 124 (513)
|.++.|+++|.+++++++..|+++|.+++.+++..+..+.+.|+++.|+.++.+++++++..++++|.+++..+++.+..
T Consensus 2 ~~i~~L~~~L~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 81 (252)
T 4hxt_A 2 NDVEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKA 81 (252)
T ss_dssp CHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred CcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHH
Confidence 56899999999999999999999999999988888999999999999999999999999999999999999888899999
Q ss_pred HHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHh-hccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcch
Q 010291 125 IVQRGAVRPLIEMLQSPDVQLREMSAFALGRLA-QDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDN 203 (513)
Q Consensus 125 ~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~-~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~ 203 (513)
+.+.|+++.|+.++++++++++..++++|.+++ .+++.+..+.+.|+++.|++++.++++.++..++++|++++...+.
T Consensus 82 ~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~ 161 (252)
T 4hxt_A 82 IVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDE 161 (252)
T ss_dssp HHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHH
Confidence 999999999999999999999999999999999 5556788888999999999999999999999999999999985544
Q ss_pred HHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCC-CCcceeee
Q 010291 204 VADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSP-DDQRTIFI 282 (513)
Q Consensus 204 ~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~-~~~~~~l~ 282 (513)
... .+.+.++++.|+.++.++++.++..|+++|++++.. +..+..+.
T Consensus 162 ~~~--------------------------------~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~ 209 (252)
T 4hxt_A 162 AIK--------------------------------AIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAIV 209 (252)
T ss_dssp HHH--------------------------------HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHHH
T ss_pred HHH--------------------------------HHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 321 223566899999999999999999999999999974 44677888
Q ss_pred cCCchHHHHhhhcCCCcchhhhHHHHHHHhhhccccc
Q 010291 283 DGGGLELLLGLLGSTNPKQQLDGAVALFKLANKATTL 319 (513)
Q Consensus 283 ~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~ 319 (513)
+.|+++.|++++.++++.++..|+++|.++.......
T Consensus 210 ~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~ 246 (252)
T 4hxt_A 210 DAGGVEVLQKLLTSTDSEVQKEAQRALENIKSGGWLE 246 (252)
T ss_dssp HTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHTCBCC
T ss_pred HCCCHHHHHHHHCCCcHHHHHHHHHHHHHHHcCCCcc
Confidence 9999999999999999999999999999999875543
No 26
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.95 E-value=1.1e-27 Score=226.50 Aligned_cols=147 Identities=34% Similarity=0.522 Sum_probs=130.7
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecCCCCHHHHHHHHHHHhcCccccCHHHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIA 416 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~~~ 416 (513)
..++.++.++|+++.++|+.|++||.||+++|+||++||.++++|+....|.++++++++|+.+|+|+|||.++++.+++
T Consensus 166 ~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~ 245 (312)
T 3hqi_A 166 GGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMA 245 (312)
T ss_dssp HHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHSCCTTHHHHH
T ss_pred HHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCCCCCChHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHhcCChhhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHhhCchh
Q 010291 417 QDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLSTRPG 483 (513)
Q Consensus 417 ~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~ 483 (513)
.+++.+|++|++++|+..|+++|.+.++.+||..++.+|+.|++..|++.|++||.+||.++.++++
T Consensus 246 ~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~g 312 (312)
T 3hqi_A 246 DDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETSG 312 (312)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999988764
No 27
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.95 E-value=2.7e-27 Score=231.72 Aligned_cols=242 Identities=21% Similarity=0.252 Sum_probs=209.8
Q ss_pred CCChhHHHHhhcc-----------CCHHHHHHHHHHHHHhhccCchhHHHHHhc-CCHHHHHHhhcCCCHHHHHHHHHHH
Q 010291 2 EGGIPPLVELLEF-----------TDTKVQRAAAGALRTLAFKNDENKNQIVEC-NALPTLILMLRSEDSAIHYEAVGVI 69 (513)
Q Consensus 2 ~g~i~~Lv~lL~~-----------~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~-g~i~~Lv~lL~~~~~~v~~~a~~~L 69 (513)
.|++++|+.+|.. .++.++.+|+++|.+++.+++.++..+... |+|+.|+++|.+++++++..|+++|
T Consensus 188 ~G~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL 267 (458)
T 3nmz_A 188 LGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVL 267 (458)
T ss_dssp TTHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhhhhcccccccCCCCHHHHHHHHHHHHHHhCCCcccHHHHHHcCCcHHHHHHHHhCCCHHHHHHHHHHH
Confidence 5899999999952 346789999999999999777788777654 5599999999999999999999999
Q ss_pred HHhhcC-ChhHHHHHHhCCChHHHHHhh-cCCChHHHHHHHHHHHHhhcCCchhhHHHH-hcCChHHHHHHhCCCCH---
Q 010291 70 GNLVHS-SPNIKKEVLAAGALQPVIGLL-SSCCSESQREAALLLGQFAATDSDCKVHIV-QRGAVRPLIEMLQSPDV--- 143 (513)
Q Consensus 70 ~~l~~~-~~~~~~~~~~~g~i~~L~~ll-~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~-~~~~i~~L~~~l~~~~~--- 143 (513)
++|+.. ++.++..+.+.|+++.|+++| .+.+.++++.++.+|+||+..+++.+..+. ..|+++.|+.++.++++
T Consensus 268 ~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~ 347 (458)
T 3nmz_A 268 RNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNT 347 (458)
T ss_dssp HHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSST
T ss_pred HHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcch
Confidence 999985 678899999999999999975 557889999999999999975666677776 78999999999997654
Q ss_pred -HHHHHHHHHHHHHhh----ccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhccc-CcchHHHHHhhcCccccc
Q 010291 144 -QLREMSAFALGRLAQ----DMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLAD-NEDNVADFIRVGGVQKLQ 217 (513)
Q Consensus 144 -~~~~~a~~~L~~l~~----~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~-~~~~~~~~~~~g~i~~L~ 217 (513)
++++.|+++|+||+. +++++..+.+.|+++.|+.+|.+++..++..|+++|+|++. +++++..+.
T Consensus 348 ~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~--------- 418 (458)
T 3nmz_A 348 LAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALW--------- 418 (458)
T ss_dssp THHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSSCHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHHHcCCHHHHHHHH---------
Confidence 599999999999995 66778888999999999999999999999999999999995 565555554
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCC
Q 010291 218 DGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDD 276 (513)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~ 276 (513)
+.|+++.|+.+|++++..+++.|+++|.||+...+
T Consensus 419 ------------------------~~G~I~~Lv~LL~s~~~~v~~~Aa~AL~nL~~~~p 453 (458)
T 3nmz_A 419 ------------------------DMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRP 453 (458)
T ss_dssp ------------------------HHTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTCCS
T ss_pred ------------------------HCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCH
Confidence 45578889999999999999999999999987644
No 28
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.95 E-value=9.1e-27 Score=238.18 Aligned_cols=307 Identities=19% Similarity=0.198 Sum_probs=256.1
Q ss_pred CCChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHH
Q 010291 2 EGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 81 (513)
Q Consensus 2 ~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 81 (513)
.|+++.|+++|+++++.++..|+++|.+++.+++..+..+.+.|+++.|+++|.+++..++..++.+|.+++.++++.+.
T Consensus 100 ~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~ 179 (529)
T 1jdh_A 100 SGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKL 179 (529)
T ss_dssp TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 48899999999999999999999999999997778889999999999999999999999999999999999998899999
Q ss_pred HHHhCCChHHHHHhhcCCCh-HHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhcc
Q 010291 82 EVLAAGALQPVIGLLSSCCS-ESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDM 160 (513)
Q Consensus 82 ~~~~~g~i~~L~~ll~~~~~-~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~ 160 (513)
.+.+.|+++.|+.++++.+. ..+..++.+|.+++. ++..+..+.+.|+++.|+.+++++++.++..++++|.+++.+.
T Consensus 180 ~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~-~~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~L~~l~~~~ 258 (529)
T 1jdh_A 180 IILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSV-CSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAA 258 (529)
T ss_dssp HHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT-STTHHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHCCCHHHHHHHHHhCChHHHHHHHHHHHHHHhc-CcccHHHHHHCCCHHHHHHHHhCCChHHHHHHHHHHHHHhcCC
Confidence 99999999999999987654 556678899999985 5677888999999999999999999999999999999999876
Q ss_pred ccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccC-cchHHHHHhhcCcccccchhhhhh---hhHHHHHHHHHH
Q 010291 161 HNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADN-EDNVADFIRVGGVQKLQDGEFIVQ---ATKDCVAKTLKR 236 (513)
Q Consensus 161 ~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~-~~~~~~~~~~g~i~~L~~~~~~~~---~~~~~~~~~~~~ 236 (513)
.... ...++++.|++++.++++.++..++++|++++.+ ++++..+.+.|+++.|++...... ........++.+
T Consensus 259 ~~~~--~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~L~~ll~~~~~~~~v~~~a~~~L~n 336 (529)
T 1jdh_A 259 TKQE--GMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRH 336 (529)
T ss_dssp TTCS--CCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhH--HHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCChHHHHHHHHccCCHHHHHHHHHHHHHH
Confidence 4433 2347889999999999999999999999999985 457888889999999887554322 222222233332
Q ss_pred H-----------HHHhhhhhHHHHHHHHHHhh-cchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcCCCcchhhh
Q 010291 237 L-----------EEKIHGRVLNHLLYLMRVAE-KGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGSTNPKQQLD 304 (513)
Q Consensus 237 ~-----------~~~~~~~~l~~Lv~lL~~~~-~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~ 304 (513)
+ ..+.+.++++.|+.+|++++ +.++..++++|+|++.++..+..+.+.|+++.|++++.++++++|..
T Consensus 337 l~~~~~~~~~~~~~i~~~~~i~~L~~lL~~~~~~~v~~~a~~~l~nl~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~ 416 (529)
T 1jdh_A 337 LTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRR 416 (529)
T ss_dssp HTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHHHHHHHHHHHHHC--
T ss_pred HHcCCchHHHHHHHHHHcCChhHHHHHhccccchHHHHHHHHHHHHHhcChhhhHHHHHcCCHHHHHHHHHHHhHHHHHH
Confidence 2 34566788999999999876 58999999999999998888888889999999999999999999999
Q ss_pred HHHHHHH
Q 010291 305 GAVALFK 311 (513)
Q Consensus 305 a~~~L~~ 311 (513)
++|++.+
T Consensus 417 a~~~l~n 423 (529)
T 1jdh_A 417 TSMGGTQ 423 (529)
T ss_dssp -------
T ss_pred HhcccCc
Confidence 9999887
No 29
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.94 E-value=1.5e-26 Score=212.62 Aligned_cols=238 Identities=26% Similarity=0.362 Sum_probs=214.1
Q ss_pred CCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHH
Q 010291 45 NALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVH 124 (513)
Q Consensus 45 g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~ 124 (513)
...+.++.+|.+++++++..|+++|.++...++..++.+.+.|+++.|+.++.+++++++..|+++|.+++.++++.+..
T Consensus 12 ~~~~~~~~~L~s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 91 (252)
T 4db8_A 12 SELPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 91 (252)
T ss_dssp CSHHHHHHHHHSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred chHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 45889999999999999999999998876656777888999999999999999999999999999999999888999999
Q ss_pred HHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccc-hhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcch
Q 010291 125 IVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQ-AGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDN 203 (513)
Q Consensus 125 ~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~-~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~ 203 (513)
+.+.|+++.|+.+++++++.+++.|+++|.|++.+++.+ ..+.+.|+++.|++++.++++.++..++++|++++...+.
T Consensus 92 i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~ 171 (252)
T 4db8_A 92 VIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE 171 (252)
T ss_dssp HHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChH
Confidence 999999999999999999999999999999999988887 8888999999999999999999999999999999985533
Q ss_pred HHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCC-CCcceeee
Q 010291 204 VADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSP-DDQRTIFI 282 (513)
Q Consensus 204 ~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~-~~~~~~l~ 282 (513)
... .+.+.++++.|+.+|+++++.++..|+++|++++.. ++.+..+.
T Consensus 172 ~~~--------------------------------~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~ 219 (252)
T 4db8_A 172 QIQ--------------------------------AVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVK 219 (252)
T ss_dssp HHH--------------------------------HHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHH--------------------------------HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 222 223456788999999999999999999999999965 44667888
Q ss_pred cCCchHHHHhhhcCCCcchhhhHHHHHHHhhh
Q 010291 283 DGGGLELLLGLLGSTNPKQQLDGAVALFKLAN 314 (513)
Q Consensus 283 ~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~ 314 (513)
+.|+++.|++++.+++++++..|+++|.+++.
T Consensus 220 ~~g~i~~L~~ll~~~~~~v~~~A~~~L~~l~~ 251 (252)
T 4db8_A 220 EAGALEKLEQLQSHENEKIQKEAQEALEKLQS 251 (252)
T ss_dssp HTTHHHHHHTTTTCSSSHHHHTHHHHHHTTC-
T ss_pred HCCcHHHHHHHhCCCCHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999875
No 30
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=99.94 E-value=5e-26 Score=237.47 Aligned_cols=316 Identities=20% Similarity=0.194 Sum_probs=257.4
Q ss_pred CCChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHH
Q 010291 2 EGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 81 (513)
Q Consensus 2 ~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 81 (513)
.|+++.|+++|+++++.++..|+++|.+++.+.+..+..+.+.|+++.|+++|+++++.++..++.+|.+++..+++.+.
T Consensus 97 ~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~~ 176 (644)
T 2z6h_A 97 SGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKL 176 (644)
T ss_dssp TTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHhcCcHHHH
Confidence 48899999999999999999999999999997778888899999999999999998888888888899999875555544
Q ss_pred HHHhC------------------------------------------CChHHHHHhh-----------------------
Q 010291 82 EVLAA------------------------------------------GALQPVIGLL----------------------- 96 (513)
Q Consensus 82 ~~~~~------------------------------------------g~i~~L~~ll----------------------- 96 (513)
.+.+. |+++.|+.++
T Consensus 177 ~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~~~~~~~~~~a~~~L~nL~~~~~ 256 (644)
T 2z6h_A 177 IILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAAT 256 (644)
T ss_dssp HHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTTCSCHHHHHHHHHHHHHHGGGCT
T ss_pred HHHHcCChHHHHHHHHcCChHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcch
Confidence 44443 4444443333
Q ss_pred ----------------cCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCC--CHHHHHHHHHHHHHHhh
Q 010291 97 ----------------SSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSP--DVQLREMSAFALGRLAQ 158 (513)
Q Consensus 97 ----------------~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~--~~~~~~~a~~~L~~l~~ 158 (513)
.+.+++++..++++|.+++..++..+..+.+.|+++.|+.++.+. .+.++..++++|+|++.
T Consensus 257 ~~~~~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~~~v~~~a~~aL~nL~~ 336 (644)
T 2z6h_A 257 KQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTS 336 (644)
T ss_dssp TCCSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTS
T ss_pred hhhhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHHccCCcHHHHHHHHHHHHHHhc
Confidence 334566777788888888877777788888999999999999863 37999999999999986
Q ss_pred ccc----cchhhHhcCChHHHHHHhcCCC-HHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhh---------
Q 010291 159 DMH----NQAGIAHNGGLVPLLKLLDSKN-GSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQ--------- 224 (513)
Q Consensus 159 ~~~----~~~~~~~~~~i~~L~~ll~~~~-~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~--------- 224 (513)
... .+..+.+.|+++.|+++|.+++ +.++..++++|+|++.++.++..+.+.|+++.|++......
T Consensus 337 ~~~~~~~~q~~v~~~~~l~~L~~lL~~~~~~~v~~~a~~~L~nLa~~~~~~~~i~~~~~i~~Lv~lL~~~~~~vr~~a~~ 416 (644)
T 2z6h_A 337 RHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSM 416 (644)
T ss_dssp SSTTHHHHHHHHHHTTHHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHHHHHHHHHHHHHTTC---
T ss_pred CCchHHHHHHHHHHccChHHHHHHhCccCchHHHHHHHHHHHHHccCHHHHHHHHHcCCHHHHHHHHhccchhhhhHhhh
Confidence 533 3455778899999999999875 68999999999999998888888889999998877443211
Q ss_pred --------------hhHHHHHHHHHHH-------HHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeec
Q 010291 225 --------------ATKDCVAKTLKRL-------EEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFID 283 (513)
Q Consensus 225 --------------~~~~~~~~~~~~~-------~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~ 283 (513)
.....+..++..+ ..+.+.++++.|+.+|.++++.++..|+++|.+++..++.+..+.+
T Consensus 417 al~n~~~~~~~~~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~i~~ 496 (644)
T 2z6h_A 417 GGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEA 496 (644)
T ss_dssp -------CCSSCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred ccccchhcccccHHHHHHHHHHHHHHHhcCHHHHHHHHhCCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 1111222222222 3456789999999999999999999999999999987777888899
Q ss_pred CCchHHHHhhhcCCCcchhhhHHHHHHHhhhccc
Q 010291 284 GGGLELLLGLLGSTNPKQQLDGAVALFKLANKAT 317 (513)
Q Consensus 284 ~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 317 (513)
.|+++.|..++.+++++++..|+++|.+++.+..
T Consensus 497 ~g~l~~L~~ll~~~~~~vr~~A~~aL~~l~~~~~ 530 (644)
T 2z6h_A 497 EGATAPLTELLHSRNEGVATYAAAVLFRMSEDKP 530 (644)
T ss_dssp TTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTTSC
T ss_pred cCChhHHHHHHcCCCHHHHHHHHHHHHHHhccCc
Confidence 9999999999999999999999999999987653
No 31
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.94 E-value=6.3e-26 Score=231.92 Aligned_cols=312 Identities=19% Similarity=0.224 Sum_probs=265.7
Q ss_pred CCChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHh-cCCHHHHHHhhcC-CCHHHHHHHHHHHHHhhcCChhH
Q 010291 2 EGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVE-CNALPTLILMLRS-EDSAIHYEAVGVIGNLVHSSPNI 79 (513)
Q Consensus 2 ~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~-~g~i~~Lv~lL~~-~~~~v~~~a~~~L~~l~~~~~~~ 79 (513)
.|+++.|+++|+++++.++..|+.+|.+++. ++.++..+.. .|+++.|+++|.+ ++++++..|+.+|.+++.+ ++.
T Consensus 16 ~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~-~~~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~-~~~ 93 (529)
T 1jdh_A 16 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSK-KEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHH-REG 93 (529)
T ss_dssp -CHHHHHHHHHTCSCHHHHHHHHHHHHHHHT-SHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS-HHH
T ss_pred HhhHHHHHHHhCCCCHHHHHHHHHHHHHHHc-CCccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHcC-chh
Confidence 5789999999999999999999999999998 5567766665 4899999999985 4899999999999999977 568
Q ss_pred HHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhc
Q 010291 80 KKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 80 ~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~ 159 (513)
+..+.+.|+++.|+.++.+++++++..++++|.+++..++..+..+.+.|+++.|++++++++++++..++.+|.+++.+
T Consensus 94 ~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~ 173 (529)
T 1jdh_A 94 LLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYG 173 (529)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhC
Confidence 89999999999999999999999999999999999988778888888999999999999999999999999999999975
Q ss_pred -cccchhhHhcCChHHHHHHhcCCC-HHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhh-hhhHHHHHHHHHH
Q 010291 160 -MHNQAGIAHNGGLVPLLKLLDSKN-GSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIV-QATKDCVAKTLKR 236 (513)
Q Consensus 160 -~~~~~~~~~~~~i~~L~~ll~~~~-~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~-~~~~~~~~~~~~~ 236 (513)
++.+..+.+.|+++.|++++.+++ ...+..++.+|.+++.+++++..+.+.|+++.|++..... ......+..++.+
T Consensus 174 ~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~L~~ 253 (529)
T 1jdh_A 174 NQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRN 253 (529)
T ss_dssp CHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCHHHHHHHHHhCChHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 566788888999999999998765 5567778899999999999999999999999887644422 1222233344444
Q ss_pred HHHH-----hhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCC-CcceeeecCCchHHHHhhhcC--CCcchhhhHHHH
Q 010291 237 LEEK-----IHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPD-DQRTIFIDGGGLELLLGLLGS--TNPKQQLDGAVA 308 (513)
Q Consensus 237 ~~~~-----~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~-~~~~~l~~~~~i~~L~~ll~~--~~~~v~~~a~~~ 308 (513)
+... ...++++.|+.++++++++++..|+++|++++..+ +.+..+.+.|+++.|++++.+ .++.++..++.+
T Consensus 254 l~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~L~~ll~~~~~~~~v~~~a~~~ 333 (529)
T 1jdh_A 254 LSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA 333 (529)
T ss_dssp HHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HhcCChhhHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCChHHHHHHHHccCCHHHHHHHHHHH
Confidence 4321 23478999999999999999999999999998865 477888899999999999975 347999999999
Q ss_pred HHHhhhc
Q 010291 309 LFKLANK 315 (513)
Q Consensus 309 L~~l~~~ 315 (513)
|.+++..
T Consensus 334 L~nl~~~ 340 (529)
T 1jdh_A 334 LRHLTSR 340 (529)
T ss_dssp HHHHTSS
T ss_pred HHHHHcC
Confidence 9999865
No 32
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=99.94 E-value=1.1e-25 Score=234.94 Aligned_cols=312 Identities=19% Similarity=0.230 Sum_probs=267.2
Q ss_pred CCChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhc-CCHHHHHHhhcCC-CHHHHHHHHHHHHHhhcCChhH
Q 010291 2 EGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVEC-NALPTLILMLRSE-DSAIHYEAVGVIGNLVHSSPNI 79 (513)
Q Consensus 2 ~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~-g~i~~Lv~lL~~~-~~~v~~~a~~~L~~l~~~~~~~ 79 (513)
.|+++.|+++|+++++.+|..|+.+|.+++.+ ..++..+... |+++.|++.|.++ +++++..|+.+|.+++.+ ++.
T Consensus 13 ~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~-~~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~-~~~ 90 (644)
T 2z6h_A 13 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKK-EASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHH-REG 90 (644)
T ss_dssp TTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTS-TTHHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTS-HHH
T ss_pred hchHHHHHHHHcCCCHHHHHHHHHHHHHHHCC-ChhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHhcC-hhh
Confidence 58999999999999999999999999999985 4566666654 8899999999864 899999999999999987 558
Q ss_pred HHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhh-
Q 010291 80 KKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQ- 158 (513)
Q Consensus 80 ~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~- 158 (513)
+..+.+.|+++.|+.++.++++.++..|+++|.|++...+..+..+.+.|+++.|+.+++++++.++..++.+|.+++.
T Consensus 91 ~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~ 170 (644)
T 2z6h_A 91 LLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYG 170 (644)
T ss_dssp HHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999999998877778888899999999999999999999999999999996
Q ss_pred ccccchhhHhcCChHHHHHHhcCCC-HHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhh-hhhHHHHHHHHHH
Q 010291 159 DMHNQAGIAHNGGLVPLLKLLDSKN-GSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIV-QATKDCVAKTLKR 236 (513)
Q Consensus 159 ~~~~~~~~~~~~~i~~L~~ll~~~~-~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~-~~~~~~~~~~~~~ 236 (513)
+++++..+.+.|+++.|++++.+.+ ..++..++.+|++++.+++++..+.+.|+++.|+...... ......+..++.+
T Consensus 171 ~~~~~~~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~~~~~~~~~~a~~~L~n 250 (644)
T 2z6h_A 171 NQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRN 250 (644)
T ss_dssp CHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTTCSCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHcCChHHHHHHHHcCChHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 5677888999999999999998765 5678899999999999999999999999999887644322 2223333444444
Q ss_pred HHHH-----hhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCC-CcceeeecCCchHHHHhhhcC-C-CcchhhhHHHH
Q 010291 237 LEEK-----IHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPD-DQRTIFIDGGGLELLLGLLGS-T-NPKQQLDGAVA 308 (513)
Q Consensus 237 ~~~~-----~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~-~~~~~l~~~~~i~~L~~ll~~-~-~~~v~~~a~~~ 308 (513)
+... ...++++.|+.+|++.+++++..|+++|++|+..+ ..+..+.+.|+++.|++++.+ + .+.++..|+.+
T Consensus 251 L~~~~~~~~~~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~~~v~~~a~~a 330 (644)
T 2z6h_A 251 LSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA 330 (644)
T ss_dssp HGGGCTTCCSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HhhcchhhhhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHHccCCcHHHHHHHHHH
Confidence 4321 12468999999999999999999999999998864 567788899999999999986 3 37999999999
Q ss_pred HHHhhhc
Q 010291 309 LFKLANK 315 (513)
Q Consensus 309 L~~l~~~ 315 (513)
|.+++..
T Consensus 331 L~nL~~~ 337 (644)
T 2z6h_A 331 LRHLTSR 337 (644)
T ss_dssp HHHHTSS
T ss_pred HHHHhcC
Confidence 9999864
No 33
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=99.94 E-value=8e-26 Score=239.50 Aligned_cols=316 Identities=20% Similarity=0.207 Sum_probs=257.5
Q ss_pred CCChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHH
Q 010291 2 EGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 81 (513)
Q Consensus 2 ~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 81 (513)
.|+++.|+++|+++++.++..|+++|.+++.+.+..+..+.+.|+++.|+.+|.+++..++..++.+|.+++..+++.+.
T Consensus 233 ~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~ 312 (780)
T 2z6g_A 233 SGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKL 312 (780)
T ss_dssp TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhcCChHHHH
Confidence 48899999999999999999999999999997788889999999999999999998888888888888877765443333
Q ss_pred ------------------------------------------HHHhCCChHHHHH-------------------------
Q 010291 82 ------------------------------------------EVLAAGALQPVIG------------------------- 94 (513)
Q Consensus 82 ------------------------------------------~~~~~g~i~~L~~------------------------- 94 (513)
.+++.|+++.|+.
T Consensus 313 ~i~~~~~i~~Lv~lL~~~~~~~~~~~a~~aL~~Ls~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~~~~a~~~L~~L~~~~~ 392 (780)
T 2z6g_A 313 IILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAAT 392 (780)
T ss_dssp HHHTTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTHHHHHHHTTHHHHHGGGTTCSCHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcChHHHHHHHHhchHHHHHHHHcCCchHHHHHHHHHHHHHhccch
Confidence 3334444444433
Q ss_pred --------------hhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCC-C-CHHHHHHHHHHHHHHhh
Q 010291 95 --------------LLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQS-P-DVQLREMSAFALGRLAQ 158 (513)
Q Consensus 95 --------------ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~-~-~~~~~~~a~~~L~~l~~ 158 (513)
++.+.+++++..|+++|.+|+..+++.+..+.+.|+++.|+.++.+ + .+.++..|+++|+||+.
T Consensus 393 ~~~~~~~~i~~Lv~lL~~~d~~vr~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~ 472 (780)
T 2z6g_A 393 KQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTS 472 (780)
T ss_dssp TCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTS
T ss_pred hhhhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHh
Confidence 3344566778888888888887777778888889999999999986 3 34899999999999986
Q ss_pred cccc----chhhHhcCChHHHHHHhcCCCH-HHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhh---------
Q 010291 159 DMHN----QAGIAHNGGLVPLLKLLDSKNG-SLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQ--------- 224 (513)
Q Consensus 159 ~~~~----~~~~~~~~~i~~L~~ll~~~~~-~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~--------- 224 (513)
.... +..+...|+++.|++++.+++. .++..++++|+|++.++.++..+.+.|+++.|++......
T Consensus 473 ~~~~~~~~~~~v~~~~~l~~L~~lL~~~~~~~v~~~A~~aL~nLa~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~ 552 (780)
T 2z6g_A 473 RHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSM 552 (780)
T ss_dssp SSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHHSSHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTC-
T ss_pred cCchHHHHHHHHHHcCCHHHHHHHhcCCChHHHHHHHHHHHHHHhcCHHHHHHHHHCCCHHHHHHHHHhcchhHHHHHhh
Confidence 5433 4577888999999999998875 9999999999999998888888889999998877443211
Q ss_pred --------------hhHHHHHHHHHHH-------HHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeec
Q 010291 225 --------------ATKDCVAKTLKRL-------EEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFID 283 (513)
Q Consensus 225 --------------~~~~~~~~~~~~~-------~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~ 283 (513)
.....+.+++.++ ..+.+.++++.|+.+|.++++.++..|+.+|.+++..++.+..+.+
T Consensus 553 al~nq~~~~~~~~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~i~~ 632 (780)
T 2z6g_A 553 GGTQQQFVEGVRMEEIVEACTGALHILARDIHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEA 632 (780)
T ss_dssp -----CCSTTCCHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred ccccchhhcccChHHHHHHHHHHHHHHhcChhhHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 0111222333332 3356788999999999999999999999999999987778888999
Q ss_pred CCchHHHHhhhcCCCcchhhhHHHHHHHhhhccc
Q 010291 284 GGGLELLLGLLGSTNPKQQLDGAVALFKLANKAT 317 (513)
Q Consensus 284 ~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 317 (513)
.|+++.|.+++.++++++|..|+++|.+++.+..
T Consensus 633 ~g~i~~L~~Ll~~~~~~Vr~~A~~aL~~l~~~~~ 666 (780)
T 2z6g_A 633 EGATAPLTELLHSRNEGVATYAAAVLFRMSEDKP 666 (780)
T ss_dssp TTCHHHHHHGGGCSCHHHHHHHHHHHHHHHTTSC
T ss_pred CCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCh
Confidence 9999999999999999999999999999998654
No 34
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.94 E-value=5.8e-25 Score=196.02 Aligned_cols=198 Identities=26% Similarity=0.376 Sum_probs=186.3
Q ss_pred CCChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHH
Q 010291 2 EGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 81 (513)
Q Consensus 2 ~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 81 (513)
.|..+.|+.+|+++++.++..|+++|.+++.++++.+..+.+.|+++.|+++|.++++.++..|+++|++++.+++..++
T Consensus 11 ~~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 90 (210)
T 4db6_A 11 GSELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ 90 (210)
T ss_dssp --CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred cchhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHH
Confidence 46789999999999999999999999999988899999999999999999999999999999999999999988899999
Q ss_pred HHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhc-c
Q 010291 82 EVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQD-M 160 (513)
Q Consensus 82 ~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~-~ 160 (513)
.+.+.|+++.|+.++.++++.++..|+++|+|++..+++....+.+.|+++.|+++++++++.++..++++|.|++.+ +
T Consensus 91 ~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~ 170 (210)
T 4db6_A 91 AVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN 170 (210)
T ss_dssp HHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCc
Confidence 999999999999999999999999999999999988888888889999999999999999999999999999999987 5
Q ss_pred ccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhccc
Q 010291 161 HNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLAD 199 (513)
Q Consensus 161 ~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~ 199 (513)
+.+..+.+.|+++.|++++.++++.+++.|+++|.+|+.
T Consensus 171 ~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~aL~~l~~ 209 (210)
T 4db6_A 171 EQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEKLQS 209 (210)
T ss_dssp HHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHhc
Confidence 567778889999999999999999999999999999985
No 35
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.93 E-value=1.5e-27 Score=198.85 Aligned_cols=129 Identities=36% Similarity=0.558 Sum_probs=98.8
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecCCCCHHHHHHHHHHHhcCccccCHHHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIA 416 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~~~ 416 (513)
..++.++.++|+++.++|+.|++||.||+++|+||++||.+++.|+....|.++++++++|+.+++|+|+|.++++.+++
T Consensus 17 ~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~~~ 96 (145)
T 4eoz_A 17 GGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMA 96 (145)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHSCCTTGGGTH
T ss_pred HHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccCccCCcHHHH
Confidence 56778899999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHhcCChhhHHHHHHHHHhcCcHHHHH
Q 010291 417 QDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRH 465 (513)
Q Consensus 417 ~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~~~~a~~~~~~~L~~ 465 (513)
.+++.+|++|++++|++.|+++|.+.++.+||+.++.+|+.|++++|++
T Consensus 97 ~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 97 DDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp HHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 9999999999999999999999999999999999999999999998864
No 36
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=99.93 E-value=7.4e-25 Score=232.11 Aligned_cols=312 Identities=18% Similarity=0.223 Sum_probs=264.1
Q ss_pred CCChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHh-cCCHHHHHHhhcC-CCHHHHHHHHHHHHHhhcCChhH
Q 010291 2 EGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVE-CNALPTLILMLRS-EDSAIHYEAVGVIGNLVHSSPNI 79 (513)
Q Consensus 2 ~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~-~g~i~~Lv~lL~~-~~~~v~~~a~~~L~~l~~~~~~~ 79 (513)
.|+++.|+++|.++++.+|..|+.+|.+++. +...+..+.. .|+++.|+++|.+ .+++++..|+.+|.+++.. +..
T Consensus 149 ~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~-~~~~~~~i~~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~-~~~ 226 (780)
T 2z6g_A 149 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSK-KEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSHH-REG 226 (780)
T ss_dssp HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHT-SHHHHHHHTTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTS-HHH
T ss_pred hCCHHHHHHHHCCCCHHHHHHHHHHHHHHhC-CChhHHHHHhccChHHHHHHHHcCCCCHHHHHHHHHHHHHHhCC-chh
Confidence 3679999999999999999999999999998 4566666664 4899999999985 4899999999999999977 566
Q ss_pred HHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhc
Q 010291 80 KKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 80 ~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~ 159 (513)
+..+.+.|+++.|+.++.++++.++..|+++|.|++...+..+..+.+.|+++.|+.++++++..++..++.+|.+++..
T Consensus 227 ~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~ 306 (780)
T 2z6g_A 227 LLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYG 306 (780)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhcC
Confidence 88888999999999999999999999999999999988788888888999999999999999999999999999999964
Q ss_pred -cccchhhHhcCChHHHHHHhcCCCH-HHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhh-hhHHHHHHHHHH
Q 010291 160 -MHNQAGIAHNGGLVPLLKLLDSKNG-SLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQ-ATKDCVAKTLKR 236 (513)
Q Consensus 160 -~~~~~~~~~~~~i~~L~~ll~~~~~-~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~-~~~~~~~~~~~~ 236 (513)
.+.+..+.+.|+++.|+.++.+++. ..+..++.+|.+|+..+.++..+++.|+++.|+....... .....+..++.+
T Consensus 307 ~~e~~~~i~~~~~i~~Lv~lL~~~~~~~~~~~a~~aL~~Ls~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~~~~a~~~L~~ 386 (780)
T 2z6g_A 307 NQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRN 386 (780)
T ss_dssp CHHHHHHHHTTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTHHHHHHHTTHHHHHGGGTTCSCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcChHHHHHHHHhchHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 5678888889999999999987764 4567889999999998889999999999998877544221 122223344444
Q ss_pred HHHH-----hhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCC-CcceeeecCCchHHHHhhhcC-CC-cchhhhHHHH
Q 010291 237 LEEK-----IHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPD-DQRTIFIDGGGLELLLGLLGS-TN-PKQQLDGAVA 308 (513)
Q Consensus 237 ~~~~-----~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~-~~~~~l~~~~~i~~L~~ll~~-~~-~~v~~~a~~~ 308 (513)
+... ...++++.|+.+|++.++.++..|+++|++|+..+ +.+..+.+.|+++.|++++.+ ++ +.++..|+++
T Consensus 387 L~~~~~~~~~~~~~i~~Lv~lL~~~d~~vr~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~v~~~Al~a 466 (780)
T 2z6g_A 387 LSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA 466 (780)
T ss_dssp HHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HhccchhhhhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHccCCHHHHHHHHHHH
Confidence 4321 23568999999999999999999999999998865 467788899999999999986 44 3899999999
Q ss_pred HHHhhhc
Q 010291 309 LFKLANK 315 (513)
Q Consensus 309 L~~l~~~ 315 (513)
|.+++..
T Consensus 467 L~nL~~~ 473 (780)
T 2z6g_A 467 LRHLTSR 473 (780)
T ss_dssp HHHTTSS
T ss_pred HHHHHhc
Confidence 9999864
No 37
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.91 E-value=1.7e-24 Score=170.41 Aligned_cols=104 Identities=29% Similarity=0.551 Sum_probs=94.2
Q ss_pred cccCCCcccEEEEecC----eeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecCCCCHHHHHHHHHHHhcCccccCHH
Q 010291 339 FVNNATLSDVTFLVEG----RRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLD 414 (513)
Q Consensus 339 ~~~~~~~~Dv~~~~~~----~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~ 414 (513)
++.++.++|+++.+++ +.|++||.||+++|+||++||.++|+|+. ..|.++++++++|+.+++|+|||.++++.+
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~ 80 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEAD 80 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCTT
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCHH
Confidence 5778999999999998 89999999999999999999999999988 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHhcC
Q 010291 415 IAQDLLRAADQYLLEGLKRLCEYTIAQDI 443 (513)
Q Consensus 415 ~~~~ll~~A~~~~~~~l~~~c~~~l~~~~ 443 (513)
++.+++.+|++|+++.|++.|+++|.+++
T Consensus 81 ~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 81 TVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 99999999999999999999999998754
No 38
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.91 E-value=2.6e-23 Score=183.76 Aligned_cols=196 Identities=16% Similarity=0.216 Sum_probs=172.8
Q ss_pred CChhHHHHhhccCCH--HHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHH
Q 010291 3 GGIPPLVELLEFTDT--KVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIK 80 (513)
Q Consensus 3 g~i~~Lv~lL~~~~~--~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~ 80 (513)
-.+|.++++|+++++ +++..|+++|.+++.++++++..+.+.|+||.|+++|+++++++++.|+++|++|+.++++++
T Consensus 8 ~~i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk 87 (233)
T 3tt9_A 8 MTLERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNK 87 (233)
T ss_dssp CCHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHH
Confidence 468999999999888 899999999999998899999999999999999999999999999999999999999889999
Q ss_pred HHHHhCCChHHHHHhhc-CCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhC----------------CCCH
Q 010291 81 KEVLAAGALQPVIGLLS-SCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQ----------------SPDV 143 (513)
Q Consensus 81 ~~~~~~g~i~~L~~ll~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~----------------~~~~ 143 (513)
..+.+.|+++.|+++|. +.+.++++.++.+|+||+.. +..+..+.+ ++++.|+.++. ..++
T Consensus 88 ~~I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~-~~~k~~i~~-~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~ 165 (233)
T 3tt9_A 88 LEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSN-DKLKNLMIT-EALLTLTENIIIPFSGWPEGDYPKANGLLDF 165 (233)
T ss_dssp HHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTS-GGGHHHHHH-HHHHHHCCCCCHHHHCCCGGGCCCCCTTCCH
T ss_pred HHHHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcC-hhhHHHHHh-ccHHHHHHHHhccccCCcccccccccccchH
Confidence 99999999999999998 57899999999999999855 555666666 46899987653 1367
Q ss_pred HHHHHHHHHHHHHhhc-cccchhhHhc-CChHHHHHHhcC------CCHHHHHHHHHHHHhcccC
Q 010291 144 QLREMSAFALGRLAQD-MHNQAGIAHN-GGLVPLLKLLDS------KNGSLQHNAAFALYGLADN 200 (513)
Q Consensus 144 ~~~~~a~~~L~~l~~~-~~~~~~~~~~-~~i~~L~~ll~~------~~~~~~~~a~~~L~~l~~~ 200 (513)
+++++|..+|+||+.. ++.|+.+.+. |.++.|+.+++. .+.+.+++++.+|.||+..
T Consensus 166 ~v~~na~~~L~nLss~~~~~R~~~r~~~Gli~~Lv~~l~~~~~~~~~~~k~~En~v~~L~nLs~~ 230 (233)
T 3tt9_A 166 DIFYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGTIADYQPDDKATENCVCILHNLSYQ 230 (233)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHTSTTHHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHCCCcHHHHHHHHHhhhhcccchhHHHHHHHHHHHHHHhh
Confidence 9999999999999975 4788889876 557999999874 2568899999999999864
No 39
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.90 E-value=8.9e-23 Score=181.82 Aligned_cols=199 Identities=24% Similarity=0.334 Sum_probs=178.1
Q ss_pred HhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchh
Q 010291 42 VECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDC 121 (513)
Q Consensus 42 ~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~ 121 (513)
...|..+.|+.+|.+++++++..|+++|++++..++..+..+.+.|+++.|+.+|.+++++++..|+++|+|++.+++..
T Consensus 9 ~~~~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~ 88 (210)
T 4db6_A 9 HHGSELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQ 88 (210)
T ss_dssp ----CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHH
T ss_pred cccchhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHH
Confidence 34678999999999999999999999999999888999999999999999999999999999999999999999888888
Q ss_pred hHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhcccc-chhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccC
Q 010291 122 KVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHN-QAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADN 200 (513)
Q Consensus 122 ~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~-~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~ 200 (513)
+..+.+.|+++.|+.+++++++.++..|+++|.|++.+.+. +..+.+.|+++.|++++.+++..++..++++|++++.+
T Consensus 89 ~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~ 168 (210)
T 4db6_A 89 IQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG 168 (210)
T ss_dssp HHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999975544 56778899999999999999999999999999999986
Q ss_pred -cchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccC
Q 010291 201 -EDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCS 273 (513)
Q Consensus 201 -~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~ 273 (513)
++.+..+ .+.++++.|+.++.++++.++..|+++|.+++.
T Consensus 169 ~~~~~~~~---------------------------------~~~g~i~~L~~ll~~~~~~v~~~a~~aL~~l~~ 209 (210)
T 4db6_A 169 GNEQKQAV---------------------------------KEAGALEKLEQLQSHENEKIQKEAQEALEKLQS 209 (210)
T ss_dssp CHHHHHHH---------------------------------HHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHCC
T ss_pred CcHHHHHH---------------------------------HHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHhc
Confidence 4333333 345688899999999999999999999999975
No 40
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.90 E-value=6e-24 Score=170.27 Aligned_cols=103 Identities=29% Similarity=0.441 Sum_probs=94.8
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecCCCCHHHHHHHHHHHhcCccccCHHHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIA 416 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~~~ 416 (513)
..++.++.++|+++.++|+.|++||.||+++|+||++||.++|+|+....|.++++++++|+.+++|+|||.++++.+++
T Consensus 17 ~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~~~~~~~~~ 96 (120)
T 2if5_A 17 NEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTATLTVSTANV 96 (120)
T ss_dssp HHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSCCCCCGGGH
T ss_pred HHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCCCccCHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHH
Q 010291 417 QDLLRAADQYLLEGLKRLCEYTI 439 (513)
Q Consensus 417 ~~ll~~A~~~~~~~l~~~c~~~l 439 (513)
.+++.+|++|++++|++.|+++|
T Consensus 97 ~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 97 GDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHh
Confidence 99999999999999999999987
No 41
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=99.90 E-value=3.6e-22 Score=184.79 Aligned_cols=183 Identities=19% Similarity=0.290 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHH-hhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhh
Q 010291 18 KVQRAAAGALRTLAFKNDENKNQIVECNALPTLIL-MLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLL 96 (513)
Q Consensus 18 ~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~-lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll 96 (513)
+.+..|+..|.+++. +.++...+.+.|++++|+. +|.++++.+|..|+++|++++.+++..++.+++.|+++.|+.+|
T Consensus 55 e~k~~Al~~L~~lv~-~~dna~~~~~~G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL 133 (296)
T 1xqr_A 55 QEREGALELLADLCE-NMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLL 133 (296)
T ss_dssp HHHHHHHHHHHHHHT-SHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-ChhhHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHH
Confidence 578899999999998 6788999999999999999 99999999999999999999999999999999999999999999
Q ss_pred cC-CChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhcc-ccchhhHhcCChHH
Q 010291 97 SS-CCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDM-HNQAGIAHNGGLVP 174 (513)
Q Consensus 97 ~~-~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~-~~~~~~~~~~~i~~ 174 (513)
.+ .+..+++.|+|+|+|++.+++.....+.+.|+++.|+.+|+++++.++..|+|+|.+++.+. +.+..+++.|+++.
T Consensus 134 ~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~ 213 (296)
T 1xqr_A 134 DRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQ 213 (296)
T ss_dssp HHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHH
Confidence 86 47899999999999999888888888889999999999999999999999999999999764 45778889999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHHhcccCc
Q 010291 175 LLKLLDSKNGSLQHNAAFALYGLADNE 201 (513)
Q Consensus 175 L~~ll~~~~~~~~~~a~~~L~~l~~~~ 201 (513)
|+.+|.+++..+++.++.+|++++...
T Consensus 214 Lv~LL~~~d~~v~~~al~aL~~l~~~~ 240 (296)
T 1xqr_A 214 LVALVRTEHSPFHEHVLGALCSLVTDF 240 (296)
T ss_dssp HHHHHTSCCSTHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999863
No 42
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.89 E-value=1.8e-23 Score=169.18 Aligned_cols=105 Identities=23% Similarity=0.421 Sum_probs=100.1
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceec-CCCCHHHHHHHHHHHhcCccccCHHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEI-PNIRWEVFELMMRFIYTGSVDVTLDI 415 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l-~~~~~~~~~~~l~~~Y~~~~~~~~~~ 415 (513)
..++.++.++|+++.++|+.|++||.||+++|+||++||.+++.| ....|.+ +++++++|+.+++|+|||.+.++.++
T Consensus 21 ~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~~~~ 99 (127)
T 1r29_A 21 NRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNILLDFMYTSRLNLREGN 99 (127)
T ss_dssp HHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHHHHHHHHHSCCCCCTTT
T ss_pred HHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHHHHHHHcCCCcCcCHHH
Confidence 457788999999999999999999999999999999999999998 7789999 99999999999999999999999999
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHhc
Q 010291 416 AQDLLRAADQYLLEGLKRLCEYTIAQD 442 (513)
Q Consensus 416 ~~~ll~~A~~~~~~~l~~~c~~~l~~~ 442 (513)
+.+++.+|++|+++.|++.|+++|.++
T Consensus 100 ~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 100 IMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999763
No 43
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.88 E-value=1.2e-23 Score=172.67 Aligned_cols=110 Identities=25% Similarity=0.379 Sum_probs=102.6
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecC-CCCHHHHHHHHHHHhcCccccCHHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIP-NIRWEVFELMMRFIYTGSVDVTLDI 415 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~-~~~~~~~~~~l~~~Y~~~~~~~~~~ 415 (513)
..++.++.++||++.++|+.|++||.||+++|+||++||.+++.|+ ..|.++ ++++++|+.+|+|+|||.+.++.++
T Consensus 28 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~~~v~~~~~~~lL~~~Ytg~~~i~~~~ 105 (138)
T 2z8h_A 28 NDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLPEEVTVKGFEPLIQFAYTAKLILSKDN 105 (138)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECCTTSCHHHHHHHHHHHHHSCCCCCTTT
T ss_pred HHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeCCCCCHHHHHHHHHHhcCCCcccCHHH
Confidence 4567889999999999999999999999999999999999988764 578995 8999999999999999999999999
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHhcCChhhH
Q 010291 416 AQDLLRAADQYLLEGLKRLCEYTIAQDISLENV 448 (513)
Q Consensus 416 ~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~ 448 (513)
+.+++.+|++|+++.|++.|+++|.+.++.+|+
T Consensus 106 v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sna 138 (138)
T 2z8h_A 106 VDEVCRCVEFLSVHNIEESCFQFLKFKFLDSTS 138 (138)
T ss_dssp HHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhcccccC
Confidence 999999999999999999999999999987763
No 44
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.88 E-value=6.4e-22 Score=174.93 Aligned_cols=196 Identities=16% Similarity=0.174 Sum_probs=171.6
Q ss_pred CHHHHHHhhcCCCH--HHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhH
Q 010291 46 ALPTLILMLRSEDS--AIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKV 123 (513)
Q Consensus 46 ~i~~Lv~lL~~~~~--~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~ 123 (513)
.++.++++|.++++ .++..|+++|.+++..++..+..+.+.|+++.|+.+|.++++++++.|+|+|.||+.++++++.
T Consensus 9 ~i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~ 88 (233)
T 3tt9_A 9 TLERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKL 88 (233)
T ss_dssp CHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 58999999998887 8999999999999988899999999999999999999999999999999999999988889999
Q ss_pred HHHhcCChHHHHHHhC-CCCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhc----------------CCCHHH
Q 010291 124 HIVQRGAVRPLIEMLQ-SPDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLD----------------SKNGSL 186 (513)
Q Consensus 124 ~~~~~~~i~~L~~~l~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~----------------~~~~~~ 186 (513)
.+.+.|+++.|+++|+ +++.++++.++.+|+||+..+.++..+.+ +++++|++++. ..+..+
T Consensus 89 ~I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~~k~~i~~-~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v 167 (233)
T 3tt9_A 89 EVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSNDKLKNLMIT-EALLTLTENIIIPFSGWPEGDYPKANGLLDFDI 167 (233)
T ss_dssp HHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHHHHHH-HHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHH
T ss_pred HHHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcChhhHHHHHh-ccHHHHHHHHhccccCCcccccccccccchHHH
Confidence 9999999999999998 57999999999999999998888888876 46888887652 125689
Q ss_pred HHHHHHHHHhccc-CcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh------hcc
Q 010291 187 QHNAAFALYGLAD-NEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVA------EKG 259 (513)
Q Consensus 187 ~~~a~~~L~~l~~-~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~------~~~ 259 (513)
+.+|..+|.||+. +++++..+.+. .|.++.|+.+++.. +..
T Consensus 168 ~~na~~~L~nLss~~~~~R~~~r~~--------------------------------~Gli~~Lv~~l~~~~~~~~~~~k 215 (233)
T 3tt9_A 168 FYNVTGCLRNMSSAGADGRKAMRRC--------------------------------DGLIDSLVHYVRGTIADYQPDDK 215 (233)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHTS--------------------------------TTHHHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHC--------------------------------CCcHHHHHHHHHhhhhcccchhH
Confidence 9999999999987 55777777653 34678888888873 556
Q ss_pred hhhhHHHHHhhccCC
Q 010291 260 VQRRVALALAHLCSP 274 (513)
Q Consensus 260 v~~~a~~aL~~l~~~ 274 (513)
.+++++.+|.||+..
T Consensus 216 ~~En~v~~L~nLs~~ 230 (233)
T 3tt9_A 216 ATENCVCILHNLSYQ 230 (233)
T ss_dssp HHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhh
Confidence 789999999999853
No 45
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.88 E-value=2.1e-23 Score=171.94 Aligned_cols=104 Identities=24% Similarity=0.407 Sum_probs=94.0
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCC--CCCCceecCCCCHHHHHHHHHHHhcCccccCHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYRE--KDARDIEIPNIRWEVFELMMRFIYTGSVDVTLD 414 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e--~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~ 414 (513)
..++.++.++|+++.++|+.|++||.||+++|+||++||.+++.+ +....|.++++++++|+.+|+|+|||.++++.+
T Consensus 39 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg~~~i~~~ 118 (144)
T 2ppi_A 39 SSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLNED 118 (144)
T ss_dssp HHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTSCCCCCTT
T ss_pred HHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCCCCCCCHH
Confidence 457889999999999999999999999999999999999998875 677899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHH
Q 010291 415 IAQDLLRAADQYLLEGLKRLCEYTIA 440 (513)
Q Consensus 415 ~~~~ll~~A~~~~~~~l~~~c~~~l~ 440 (513)
++.+++.+|++|++++|++.|+++|+
T Consensus 119 ~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 119 TIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 99999999999999999999998863
No 46
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.88 E-value=1.9e-23 Score=166.59 Aligned_cols=102 Identities=25% Similarity=0.378 Sum_probs=94.1
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecCCCCHHHHHHHHHHHhcCccccCHHHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIA 416 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~~~ 416 (513)
..++.++.++|+++.++|+.|++||.||+++|+||++||.+++ ...|.++++++++|+.+++|+|||.++++.+++
T Consensus 16 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~iYtg~~~~~~~~v 91 (119)
T 3b84_A 16 NKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFFYTGHLALTSGNR 91 (119)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHHHHSCCCCCTTTH
T ss_pred HHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHHcCCCCccCHHHH
Confidence 3567889999999999999999999999999999999999876 568999999999999999999999999999999
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHhc
Q 010291 417 QDLLRAADQYLLEGLKRLCEYTIAQD 442 (513)
Q Consensus 417 ~~ll~~A~~~~~~~l~~~c~~~l~~~ 442 (513)
.+++.+|++|++++|++.|+++|.+.
T Consensus 92 ~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 92 DQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 99999999999999999999998763
No 47
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.88 E-value=3e-23 Score=169.25 Aligned_cols=106 Identities=25% Similarity=0.347 Sum_probs=92.7
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecCCCCHHHHHHHHHHHhcCccccCHHHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIA 416 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~~~ 416 (513)
..++.++.++||++.++|+.|++||.||+++|+||++||.+++ ...|.++++++++|+.+|+|+|||++.++.+++
T Consensus 17 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~fiYtg~~~i~~~~v 92 (135)
T 2yy9_A 17 NKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDFFYTGHLALTSGNR 92 (135)
T ss_dssp HHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHHHHHSCCCCCTTTH
T ss_pred HHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHHHhCCCCCCCHHHH
Confidence 4578899999999999999999999999999999999999876 568999999999999999999999999999999
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHhcCChh
Q 010291 417 QDLLRAADQYLLEGLKRLCEYTIAQDISLE 446 (513)
Q Consensus 417 ~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~ 446 (513)
.+++.+|++|+++.|++.|+++|.+.+...
T Consensus 93 ~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 93 DQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 999999999999999999999998876543
No 48
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.88 E-value=1.2e-22 Score=162.54 Aligned_cols=101 Identities=25% Similarity=0.409 Sum_probs=95.0
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecCCCCHHHHHHHHHHHhcCccccCHHHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIA 416 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~~~ 416 (513)
..++.++.++|+++.++|+.|++||.||+++|+||++||.++ ...|.++++++++|+.+++|+|||.++++.+++
T Consensus 20 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Ytg~~~~~~~~~ 94 (121)
T 1buo_A 20 NQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQILEYAYTATLQAKAEDL 94 (121)
T ss_dssp HHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHHHSCCCCCGGGH
T ss_pred HHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCCHHHHHHHHHhhcCCCcCCCHHHH
Confidence 456788999999999999999999999999999999999864 458999999999999999999999999999999
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHhc
Q 010291 417 QDLLRAADQYLLEGLKRLCEYTIAQD 442 (513)
Q Consensus 417 ~~ll~~A~~~~~~~l~~~c~~~l~~~ 442 (513)
.+++.+|++|++++|++.|+++|.+.
T Consensus 95 ~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 95 DDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999864
No 49
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.87 E-value=1.1e-22 Score=161.67 Aligned_cols=100 Identities=22% Similarity=0.400 Sum_probs=93.1
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecC--CCCHHHHHHHHHHHhcCccccCHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIP--NIRWEVFELMMRFIYTGSVDVTLD 414 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~--~~~~~~~~~~l~~~Y~~~~~~~~~ 414 (513)
..++.++.++|+++.++|+.|++||.||+++|+||++||.++ ....|.++ ++++++|+.+++|+|||.++++.+
T Consensus 14 ~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~~~ 89 (116)
T 2vpk_A 14 NKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFIYTGTLNLDSW 89 (116)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHHHHSCCCCCTT
T ss_pred HHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHHcCCCcccCHH
Confidence 356778999999999999999999999999999999999876 35677777 999999999999999999999999
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHH
Q 010291 415 IAQDLLRAADQYLLEGLKRLCEYTIA 440 (513)
Q Consensus 415 ~~~~ll~~A~~~~~~~l~~~c~~~l~ 440 (513)
++.+++.+|++|++++|++.|+++|.
T Consensus 90 ~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 90 NVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999999999985
No 50
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=99.86 E-value=1.1e-20 Score=174.86 Aligned_cols=159 Identities=19% Similarity=0.213 Sum_probs=151.5
Q ss_pred CCChhHHHH-hhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcC-CCHHHHHHHHHHHHHhhcCChhH
Q 010291 2 EGGIPPLVE-LLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRS-EDSAIHYEAVGVIGNLVHSSPNI 79 (513)
Q Consensus 2 ~g~i~~Lv~-lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~-~~~~v~~~a~~~L~~l~~~~~~~ 79 (513)
.|++++|+. +|+++++.+|..|+++|++++.+++..+..+++.|++++|+++|++ ++..++..|+++|++++.+++..
T Consensus 80 ~G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~ 159 (296)
T 1xqr_A 80 LSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAG 159 (296)
T ss_dssp TTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHH
Confidence 489999999 9999999999999999999999899999999999999999999995 58899999999999999988888
Q ss_pred HHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhc
Q 010291 80 KKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 80 ~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~ 159 (513)
.+.+.+.|+++.|+.+|.+++..++..|+|+|.+++.++++.+..+++.|+++.|+.+|.++++.+++.++++|.|++.+
T Consensus 160 ~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~LL~~~d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 160 LLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHHHHcCCChhHHHHHHHHHHHHHhC
Confidence 88899999999999999999999999999999999988888999999999999999999999999999999999999987
Q ss_pred c
Q 010291 160 M 160 (513)
Q Consensus 160 ~ 160 (513)
.
T Consensus 240 ~ 240 (296)
T 1xqr_A 240 F 240 (296)
T ss_dssp C
T ss_pred C
Confidence 4
No 51
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.86 E-value=2.9e-22 Score=159.76 Aligned_cols=99 Identities=22% Similarity=0.365 Sum_probs=92.6
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecCCCCHHHHHHHHHHHhcCccccCHHHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIA 416 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~~~ 416 (513)
..++.++.++|+++.++|+.|++||.||+++|+||++||.+ ....|.++++++++|+.+++|+|||.+.++.+++
T Consensus 19 ~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~-----~~~~i~l~~~~~~~f~~ll~~~Ytg~~~i~~~~~ 93 (119)
T 2q81_A 19 NQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVD-----QKDVVHLDISNAAGLGQVLEFMYTAKLSLSPENV 93 (119)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHH-----CCSGGGGGGCCHHHHHHHHHHHHHSCCCCCTTTH
T ss_pred HHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcC-----CCCEEEeCCCCHHHHHHHHHHHcCCCCccCHHHH
Confidence 45677899999999999999999999999999999999986 3457899999999999999999999999999999
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHH
Q 010291 417 QDLLRAADQYLLEGLKRLCEYTIA 440 (513)
Q Consensus 417 ~~ll~~A~~~~~~~l~~~c~~~l~ 440 (513)
.+++.+|++|++++|++.|+++|.
T Consensus 94 ~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 94 DDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999999999999984
No 52
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.6e-21 Score=197.53 Aligned_cols=284 Identities=15% Similarity=0.115 Sum_probs=227.2
Q ss_pred CChhHHHHhhcc-CCHHHHHHHHHHHHHhhccCch--------------------------------------hHHHHHh
Q 010291 3 GGIPPLVELLEF-TDTKVQRAAAGALRTLAFKNDE--------------------------------------NKNQIVE 43 (513)
Q Consensus 3 g~i~~Lv~lL~~-~~~~~~~~a~~~L~~l~~~~~~--------------------------------------~~~~i~~ 43 (513)
|+++.|+++++. ++..+...++.+|.|++...+. ++..+.+
T Consensus 376 ~~L~~Lv~llk~~~d~s~~Ygal~IL~NLt~~~~~~~~e~~~l~~Lk~~A~~~~p~~~~~d~~~~~~~~v~~~~~~~l~e 455 (778)
T 3opb_A 376 SFTEILLTMIKSQKMTHCLYGLLVIMANLSTLPEEXXXXXXXXXXXXXXXXXXXPAADKVGAEKAAKEDILLFNEKYILR 455 (778)
T ss_dssp HHHHHHHHHHTTTCCTTHHHHHHHHHHHTTCCCCCCCCCCC------------------CCTHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhCCCCchHHHHHHHHHHHhcCCCcccchhhhhhhhhhhhccccCcccCcccccccchHHHHHHHHHHHHH
Confidence 467889999985 7788999999999999873221 4556778
Q ss_pred cCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChH---HHHHHHHHHHHhhcCCch
Q 010291 44 CNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSE---SQREAALLLGQFAATDSD 120 (513)
Q Consensus 44 ~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~---~~~~a~~~L~~l~~~~~~ 120 (513)
.|+++.|+.+++++++.++..|+++|.+++.+ +.+|..+++.|+++.|+.++.+.... .+..|+.+|.++.....+
T Consensus 456 aGvIp~Lv~Ll~S~s~~~re~A~~aL~nLS~d-~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np 534 (778)
T 3opb_A 456 TELISFLKREMHNLSPNCKQQVVRIIYNITRS-KNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFTNP 534 (778)
T ss_dssp TTHHHHHHHHGGGSCHHHHHHHHHHHHHHHTS-GGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCH
T ss_pred CcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCH
Confidence 89999999999999999999999999999976 88899999999999999999887544 899999999999844332
Q ss_pred hhHHHH---hcCChHHHHHHhCC-CCH-------------HHHHHHHHHHHHHhhccc-----cchhhHhc-CChHHHHH
Q 010291 121 CKVHIV---QRGAVRPLIEMLQS-PDV-------------QLREMSAFALGRLAQDMH-----NQAGIAHN-GGLVPLLK 177 (513)
Q Consensus 121 ~~~~~~---~~~~i~~L~~~l~~-~~~-------------~~~~~a~~~L~~l~~~~~-----~~~~~~~~-~~i~~L~~ 177 (513)
.. .+- ..|++++|+.+|.. +.. --+..|+.+|.||+..++ .|..++.. |+++.|..
T Consensus 535 ~~-~f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~ 613 (778)
T 3opb_A 535 GL-IFKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIEN 613 (778)
T ss_dssp HH-HSSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HH-HcCCCccccchHHHHHHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHH
Confidence 21 111 13889999999983 211 126799999999998763 36777874 99999999
Q ss_pred HhcCCCHHHHHHHHHHHHhcccCcchH-HHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh
Q 010291 178 LLDSKNGSLQHNAAFALYGLADNEDNV-ADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVA 256 (513)
Q Consensus 178 ll~~~~~~~~~~a~~~L~~l~~~~~~~-~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~ 256 (513)
++.+++..+++.|+++++||+.+++.. ..+...+. + ...+-++.|+.++++.
T Consensus 614 LL~s~n~~VrrAA~elI~NL~~~~e~i~~k~~~~~~-~--------------------------~~~~rL~lLV~Ll~s~ 666 (778)
T 3opb_A 614 LMLDENVPLQRSTLELISNMMSHPLTIAAKFFNLEN-P--------------------------QSLRNFNILVKLLQLS 666 (778)
T ss_dssp GGGCSSHHHHHHHHHHHHHHHTSGGGTGGGTSCCSS-H--------------------------HHHHHHHHHHHGGGCS
T ss_pred HHhCCCHHHHHHHHHHHHHHhCCcHHHHHHHHhhcC-c--------------------------hhhccHHHHHHHHcCC
Confidence 999999999999999999999877653 22321110 0 0123488999999999
Q ss_pred hcchhhhHHHHHhhccC-CCCcceeeecC-CchHHHHhhhcC--CCcchhhhHHHHHHHhhhc
Q 010291 257 EKGVQRRVALALAHLCS-PDDQRTIFIDG-GGLELLLGLLGS--TNPKQQLDGAVALFKLANK 315 (513)
Q Consensus 257 ~~~v~~~a~~aL~~l~~-~~~~~~~l~~~-~~i~~L~~ll~~--~~~~v~~~a~~~L~~l~~~ 315 (513)
+.++|.+|+++|++++. .+.....+++. ++++.+++++.+ ++++++..++.+++|++..
T Consensus 667 D~~~r~AAagALAnLts~~~~ia~~ll~~~~gi~~Ll~lL~~~~~~~~l~~R~~~~l~NL~~~ 729 (778)
T 3opb_A 667 DVESQRAVAAIFANIATTIPLIAKELLTKKELIENAIQVFADQIDDIELRQRLLMLFFGLFEV 729 (778)
T ss_dssp CHHHHHHHHHHHHHHHHHCHHHHHHHTTCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhcCCChHHHHHHHHccccHHHHHHHHhccCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999964 45555556665 899999999998 8999999999999999974
No 53
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.85 E-value=6e-23 Score=165.63 Aligned_cols=101 Identities=24% Similarity=0.407 Sum_probs=94.8
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecCC-CCHHHHHHHHHHHhcCccccCHHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPN-IRWEVFELMMRFIYTGSVDVTLDI 415 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~~-~~~~~~~~~l~~~Y~~~~~~~~~~ 415 (513)
..++.++.++|+++.++|+.|++||.||+++|+||++||.+++.| ...|.+++ +++++|+.+++|+|||.++++.++
T Consensus 24 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~~l~~iYtg~~~~~~~~ 101 (125)
T 3ohu_A 24 NDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGPLLQFAYTAKLLLSREN 101 (125)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHHHHHHHTTSEEEECTTT
T ss_pred HHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHHHHHhHcCCceEECHHH
Confidence 456788999999999999999999999999999999999998876 67899998 999999999999999999999999
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHH
Q 010291 416 AQDLLRAADQYLLEGLKRLCEYTI 439 (513)
Q Consensus 416 ~~~ll~~A~~~~~~~l~~~c~~~l 439 (513)
+.+++.+|++|+++.|++.|+++|
T Consensus 102 v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 102 IREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHhC
Confidence 999999999999999999998753
No 54
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.85 E-value=1.7e-22 Score=163.72 Aligned_cols=102 Identities=24% Similarity=0.378 Sum_probs=89.0
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecC-CCCHHHHHHHHHHHhcCccccCHHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIP-NIRWEVFELMMRFIYTGSVDVTLDI 415 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~-~~~~~~~~~~l~~~Y~~~~~~~~~~ 415 (513)
..++.++.++|+++.++|+.|++||.||+++|+||++||.++ ....|.++ ++++++|+.+++|+|||.+.++.++
T Consensus 25 ~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~ll~~iYtg~~~i~~~~ 100 (129)
T 3ga1_A 25 NEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGD 100 (129)
T ss_dssp HHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHHHHHHHHSEEECCTTT
T ss_pred HHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHHHHHHhCCccccCHHH
Confidence 456778999999999999999999999999999999999876 56789997 8999999999999999999999999
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHhc
Q 010291 416 AQDLLRAADQYLLEGLKRLCEYTIAQD 442 (513)
Q Consensus 416 ~~~ll~~A~~~~~~~l~~~c~~~l~~~ 442 (513)
+.+++.+|++|++++|++.|+++|.+.
T Consensus 101 ~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 101 QDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp HHHHHHHHHHTTBTTSSCC--------
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999874
No 55
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.85 E-value=7.8e-23 Score=164.34 Aligned_cols=102 Identities=25% Similarity=0.423 Sum_probs=92.2
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecC-CCCHHHHHHHHHHHhcCccccCHHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIP-NIRWEVFELMMRFIYTGSVDVTLDI 415 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~-~~~~~~~~~~l~~~Y~~~~~~~~~~ 415 (513)
..++.++.++|+++.++|+.|++||.||+++|+||++||.++++|+ ..|.++ ++++++|+.+++|+|||.++++.++
T Consensus 21 ~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f~~lL~~iYtg~~~i~~~~ 98 (124)
T 2ihc_A 21 NDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVTVKGFEPLIQFAYTAKLILSKEN 98 (124)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSCHHHHHHHHHHHHHSEEEEETTT
T ss_pred HHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHHHHHHHHhcCCCcccCHHH
Confidence 4567788999999999999999999999999999999999988764 578894 8999999999999999999999999
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHH
Q 010291 416 AQDLLRAADQYLLEGLKRLCEYTIA 440 (513)
Q Consensus 416 ~~~ll~~A~~~~~~~l~~~c~~~l~ 440 (513)
+.+++.+|++|+++.|++.|+++|.
T Consensus 99 v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 99 VDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 9999999999999999999998864
No 56
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.4e-19 Score=183.39 Aligned_cols=277 Identities=16% Similarity=0.153 Sum_probs=222.0
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhc-CCHHHHHHhhcC-CCHHHHHHHHHHHHHhhcCChh----
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVEC-NALPTLILMLRS-EDSAIHYEAVGVIGNLVHSSPN---- 78 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~-g~i~~Lv~lL~~-~~~~v~~~a~~~L~~l~~~~~~---- 78 (513)
.+.+++.|.+++.+.+..|++.|..++. .++.++.+++. |.++.|+.++++ .+..+...++.+|.|++...+.
T Consensus 336 a~~~~~~L~~~~~~~~~~AvEgLaYLSl-~~~VKe~L~~d~~~L~~Lv~llk~~~d~s~~Ygal~IL~NLt~~~~~~~~e 414 (778)
T 3opb_A 336 SEIFINAISRRIVPKVEMSVEALAYLSL-KASVKIMIRSNESFTEILLTMIKSQKMTHCLYGLLVIMANLSTLPEEXXXX 414 (778)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHHHHTT-SSHHHHHHHHCHHHHHHHHHHHTTTCCTTHHHHHHHHHHHTTCCCCCCCCC
T ss_pred HHHHHHHHhcCCccHHHHHHHHHHHHhC-CHHHHHHHHhCHHHHHHHHHHHhCCCCchHHHHHHHHHHHhcCCCcccchh
Confidence 3556777777776779999999999998 78888888875 559999999994 7888999999999999974331
Q ss_pred ----------------------------------HHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHH
Q 010291 79 ----------------------------------IKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVH 124 (513)
Q Consensus 79 ----------------------------------~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~ 124 (513)
++..+.+.|+++.|+.++.++++.++..++++|.|++ .+++.+..
T Consensus 415 ~~~l~~Lk~~A~~~~p~~~~~d~~~~~~~~v~~~~~~~l~eaGvIp~Lv~Ll~S~s~~~re~A~~aL~nLS-~d~~~R~~ 493 (778)
T 3opb_A 415 XXXXXXXXXXXXXXXPAADKVGAEKAAKEDILLFNEKYILRTELISFLKREMHNLSPNCKQQVVRIIYNIT-RSKNFIPQ 493 (778)
T ss_dssp CC------------------CCTHHHHHHHHHHHHHHHTTTTTHHHHHHHHGGGSCHHHHHHHHHHHHHHH-TSGGGHHH
T ss_pred hhhhhhhhhhccccCcccCcccccccchHHHHHHHHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHc-CCHHHHHH
Confidence 3566778899999999999999999999999999998 55889999
Q ss_pred HHhcCChHHHHHHhCCCCHH---HHHHHHHHHHHHhhccccchhhHh---cCChHHHHHHhcC-CC-H------------
Q 010291 125 IVQRGAVRPLIEMLQSPDVQ---LREMSAFALGRLAQDMHNQAGIAH---NGGLVPLLKLLDS-KN-G------------ 184 (513)
Q Consensus 125 ~~~~~~i~~L~~~l~~~~~~---~~~~a~~~L~~l~~~~~~~~~~~~---~~~i~~L~~ll~~-~~-~------------ 184 (513)
+++.|+++.|+.++.+.... .+..|+.+|.++....+....+.. .|++++|+.+|.. +. .
T Consensus 494 lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np~~~f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~~~ 573 (778)
T 3opb_A 494 LAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFTNPGLIFKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKL 573 (778)
T ss_dssp HHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCHHHHSSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCCCH
T ss_pred HHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCHHHHcCCCccccchHHHHHHcCCCCCcccccccccccccH
Confidence 99999999999999987544 899999999999965443322211 3889999999983 11 1
Q ss_pred HHHHHHHHHHHhcccCcch-----HHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcc
Q 010291 185 SLQHNAAFALYGLADNEDN-----VADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKG 259 (513)
Q Consensus 185 ~~~~~a~~~L~~l~~~~~~-----~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~ 259 (513)
.-+..|+.+|.||+..+++ +..+++ +.++++.|..+|.+.+..
T Consensus 574 l~~feAL~ALTNLAs~~~n~~E~~r~~Ii~--------------------------------~~ga~~~L~~LL~s~n~~ 621 (778)
T 3opb_A 574 TDNYEALLALTNLASSETSDGEEVCKHIVS--------------------------------TKVYWSTIENLMLDENVP 621 (778)
T ss_dssp HHHHHHHHHHHHHHHCCSHHHHHHHHHHHH--------------------------------SHHHHHHHHHGGGCSSHH
T ss_pred HHHHHHHHHHHHHhcCCcccchHHHHHHHH--------------------------------hcCHHHHHHHHHhCCCHH
Confidence 1267899999999987633 333332 136789999999999999
Q ss_pred hhhhHHHHHhhccCCCCcc-eeeecCC------chHHHHhhhcCCCcchhhhHHHHHHHhhhc
Q 010291 260 VQRRVALALAHLCSPDDQR-TIFIDGG------GLELLLGLLGSTNPKQQLDGAVALFKLANK 315 (513)
Q Consensus 260 v~~~a~~aL~~l~~~~~~~-~~l~~~~------~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~ 315 (513)
+|.+|+++++||+.+++.. ..+.+.+ .++.|+.++.+++.++|..|+++|.+++..
T Consensus 622 VrrAA~elI~NL~~~~e~i~~k~~~~~~~~~~~rL~lLV~Ll~s~D~~~r~AAagALAnLts~ 684 (778)
T 3opb_A 622 LQRSTLELISNMMSHPLTIAAKFFNLENPQSLRNFNILVKLLQLSDVESQRAVAAIFANIATT 684 (778)
T ss_dssp HHHHHHHHHHHHHTSGGGTGGGTSCCSSHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHhhcCchhhccHHHHHHHHcCCCHHHHHHHHHHHHHhcCC
Confidence 9999999999999887754 2333222 378999999999999999999999999643
No 57
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.83 E-value=3.6e-21 Score=152.46 Aligned_cols=94 Identities=20% Similarity=0.221 Sum_probs=86.7
Q ss_pred cccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecCCCCHHHHHHHHHHHhcCccccCHHHHHH
Q 010291 339 FVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQD 418 (513)
Q Consensus 339 ~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~~~~~ 418 (513)
.+.++.++||++.++|+.|++||.||+++|+||++ ....|.++++++++|+.+++|+|||++.++.+++.+
T Consensus 24 ~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~~~v~~ 94 (119)
T 3m5b_A 24 ARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQWALGEGISPSTFAQLLNFVYGESVELQPGELRP 94 (119)
T ss_dssp HHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEEEECCSSCCHHHHHHHHHHHTTCCEEECGGGHHH
T ss_pred HHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCCEEEeCCCCHHHHHHHHHHHcCCCcCcCHHHHHH
Confidence 35678999999999999999999999999999984 346799999999999999999999999999999999
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHh
Q 010291 419 LLRAADQYLLEGLKRLCEYTIAQ 441 (513)
Q Consensus 419 ll~~A~~~~~~~l~~~c~~~l~~ 441 (513)
++.+|++|+++.|++.|++++.+
T Consensus 95 ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 95 LQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHHhCCHHHHHHHHHHHhh
Confidence 99999999999999999998765
No 58
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.82 E-value=2.4e-20 Score=147.48 Aligned_cols=92 Identities=27% Similarity=0.471 Sum_probs=86.1
Q ss_pred hhcccCCCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecCCCCHHHHHHHHHHHhcCcc-ccCHHH
Q 010291 337 DQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSV-DVTLDI 415 (513)
Q Consensus 337 ~~~~~~~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~-~~~~~~ 415 (513)
..++.++.++|+++.++|+.|++||.||+++|+||++||.++ ...|.++++++++|+.+++|+|||.+ .++.++
T Consensus 23 ~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~~~l~~~Ytg~~~~~~~~~ 97 (116)
T 3fkc_A 23 NEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIRAEIFAEILNYIYSSKIVRVRSDL 97 (116)
T ss_dssp HHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHTTSCCCSCCHHH
T ss_pred HHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHhhcCCCcCCCCHHH
Confidence 456778999999999999999999999999999999999875 56899999999999999999999999 799999
Q ss_pred HHHHHHHHHHhcHHHHHH
Q 010291 416 AQDLLRAADQYLLEGLKR 433 (513)
Q Consensus 416 ~~~ll~~A~~~~~~~l~~ 433 (513)
+.+++.+|++|++++|++
T Consensus 98 ~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 98 LDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHHHHHHTCHHHHT
T ss_pred HHHHHHHHHHhCccccCc
Confidence 999999999999999874
No 59
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=99.63 E-value=2.7e-14 Score=132.79 Aligned_cols=226 Identities=15% Similarity=0.079 Sum_probs=166.4
Q ss_pred CChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 3 GGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 3 g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
+.++.|++.|+++++.+|..|+++|+++.. .+.++.|+.+|.++++.+|..|+++|+.+........ .
T Consensus 23 ~~i~~L~~~L~~~~~~vr~~A~~~L~~~~~-----------~~~~~~L~~~l~d~~~~vR~~A~~aL~~l~~~~~~~~-~ 90 (280)
T 1oyz_A 23 LNDDELFRLLDDHNSLKRISSARVLQLRGG-----------QDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCED-N 90 (280)
T ss_dssp SCHHHHHHHTTCSSHHHHHHHHHHHHHHCC-----------HHHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTTTHH-H
T ss_pred hhHHHHHHHHHcCCHHHHHHHHHHHHccCC-----------chHHHHHHHHHcCCCHHHHHHHHHHHHHhccccccch-H
Confidence 578999999999999999999999999873 2368899999999999999999999999874322211 1
Q ss_pred HHhCCChHHHH-HhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccc
Q 010291 83 VLAAGALQPVI-GLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMH 161 (513)
Q Consensus 83 ~~~~g~i~~L~-~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~ 161 (513)
.++.|. .+++++++.++..++++|+++...++... ...++.|+..++++++.++..++++|+++..
T Consensus 91 -----l~~~L~~~~~~d~~~~vr~~a~~aL~~l~~~~~~~~-----~~~~~~L~~~l~d~~~~vR~~a~~aL~~~~~--- 157 (280)
T 1oyz_A 91 -----VFNILNNMALNDKSACVRATAIESTAQRCKKNPIYS-----PKIVEQSQITAFDKSTNVRRATAFAISVIND--- 157 (280)
T ss_dssp -----HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGGGH-----HHHHHHHHHHTTCSCHHHHHHHHHHHHTC-----
T ss_pred -----HHHHHHHHHhcCCCHHHHHHHHHHHHHHhccCCccc-----HHHHHHHHHHhhCCCHHHHHHHHHHHHhcCC---
Confidence 233343 24577899999999999999975443222 2357889999999999999999999998753
Q ss_pred cchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHh
Q 010291 162 NQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKI 241 (513)
Q Consensus 162 ~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (513)
.+.++.|..++.++++.++..++++|+.+.....
T Consensus 158 -------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~--------------------------------------- 191 (280)
T 1oyz_A 158 -------KATIPLLINLLKDPNGDVRNWAAFAININKYDNS--------------------------------------- 191 (280)
T ss_dssp --------CCHHHHHHHHTCSSHHHHHHHHHHHHHHTCCCH---------------------------------------
T ss_pred -------HHHHHHHHHHHcCCCHHHHHHHHHHHHhhccCcH---------------------------------------
Confidence 2478899999999999999999999998853221
Q ss_pred hhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcCCCcchhhhHHHHHHHhh
Q 010291 242 HGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGSTNPKQQLDGAVALFKLA 313 (513)
Q Consensus 242 ~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~ 313 (513)
.+++.|+.+++++++.+|..|+++|+++. ....++.|...+.++ +++..++.+|..+.
T Consensus 192 --~~~~~L~~~l~d~~~~vR~~A~~aL~~~~----------~~~~~~~L~~~l~d~--~vr~~a~~aL~~i~ 249 (280)
T 1oyz_A 192 --DIRDCFVEMLQDKNEEVRIEAIIGLSYRK----------DKRVLSVLCDELKKN--TVYDDIIEAAGELG 249 (280)
T ss_dssp --HHHHHHHHHTTCSCHHHHHHHHHHHHHTT----------CGGGHHHHHHHHTSS--SCCHHHHHHHHHHC
T ss_pred --HHHHHHHHHhcCCCHHHHHHHHHHHHHhC----------CHhhHHHHHHHhcCc--cHHHHHHHHHHhcC
Confidence 23455556666666666666666666654 224566666666542 36666666666553
No 60
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.56 E-value=1.5e-14 Score=120.34 Aligned_cols=111 Identities=18% Similarity=0.323 Sum_probs=91.7
Q ss_pred EEEEe-cCeeehhhHHHHhhcCHHHHHhccC-CCC-CCCCCceecCCCCHHHHHHHHHHHhcCc----------------
Q 010291 348 VTFLV-EGRRFYAHRICLLASSDAFRAMFDG-GYR-EKDARDIEIPNIRWEVFELMMRFIYTGS---------------- 408 (513)
Q Consensus 348 v~~~~-~~~~~~~h~~il~~~s~~f~~~~~~-~~~-e~~~~~i~l~~~~~~~~~~~l~~~Y~~~---------------- 408 (513)
|++.. +|+.|.+||.+ ++.|+||++||.+ ++. |+....|+|+++++.+++.+++|+|++.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 56654 78999999999 8899999999987 777 7777899999999999999999999988
Q ss_pred ----------cccCHHHHHHHHHHHHHhcHHHHHHHHHHHHHhcC---ChhhHHHHHHHHHhcC
Q 010291 409 ----------VDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDI---SLENVSSMYELSEAFH 459 (513)
Q Consensus 409 ----------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~---~~~n~~~~~~~a~~~~ 459 (513)
+.++.+++.+|+.+|++|++.+|...|.+++...+ +++.+..++.+...|.
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t 145 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFT 145 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSC
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCC
Confidence 67889999999999999999999999999997765 5666666655554444
No 61
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=99.55 E-value=1.9e-13 Score=135.15 Aligned_cols=289 Identities=11% Similarity=0.138 Sum_probs=213.4
Q ss_pred CCChhHHHHhhcc--CCHHHHHHHHHHHHHhhccCch-----------------hHHHH-HhcCCHHHHHHhhcCCCHHH
Q 010291 2 EGGIPPLVELLEF--TDTKVQRAAAGALRTLAFKNDE-----------------NKNQI-VECNALPTLILMLRSEDSAI 61 (513)
Q Consensus 2 ~g~i~~Lv~lL~~--~~~~~~~~a~~~L~~l~~~~~~-----------------~~~~i-~~~g~i~~Lv~lL~~~~~~v 61 (513)
+++++.|+..|+. .|.++...++.+|.++...+++ +.+.+ .+.+.++.|+.+|++.+-.+
T Consensus 59 ~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~~df~v 138 (651)
T 3grl_A 59 IQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHV 138 (651)
T ss_dssp HHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHHTTCCCHHH
T ss_pred hhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcCccHHH
Confidence 3578999999976 4788888999999887654332 11223 34578999999999999999
Q ss_pred HHHHHHHHHHhhcCChh-HHHHHHhC-CChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhC
Q 010291 62 HYEAVGVIGNLVHSSPN-IKKEVLAA-GALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQ 139 (513)
Q Consensus 62 ~~~a~~~L~~l~~~~~~-~~~~~~~~-g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~ 139 (513)
|..++.+|..++..++. .++.+... ++++.|+.+|.+....+|..++..|.+++.++++.+..+.-.|+++.|++++.
T Consensus 139 R~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~ 218 (651)
T 3grl_A 139 RWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIIT 218 (651)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHHHHHH
Confidence 99999999999998887 77777755 99999999999999999999999999999999998888888899999999998
Q ss_pred CCC----HHHHHHHHHHHHHHhhccc-cchhhHhcCChHHHHHHhcCCCH------HHHHH---HHHHHHhcccCcchHH
Q 010291 140 SPD----VQLREMSAFALGRLAQDMH-NQAGIAHNGGLVPLLKLLDSKNG------SLQHN---AAFALYGLADNEDNVA 205 (513)
Q Consensus 140 ~~~----~~~~~~a~~~L~~l~~~~~-~~~~~~~~~~i~~L~~ll~~~~~------~~~~~---a~~~L~~l~~~~~~~~ 205 (513)
... ..+...|+.+|.||.+++. +|..+.+.|+++.|..++..+++ ....+ ++.++.-|+..... .
T Consensus 219 ~Eg~~~Ggivv~DCL~ll~nLLr~N~sNQ~~FrEt~~i~~L~~LL~~~~~~~~W~~Qk~~N~~~~L~iIrlLv~~~~~-~ 297 (651)
T 3grl_A 219 EEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLVRVLVSPNNP-P 297 (651)
T ss_dssp HHTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGGGGGGCCCSCSSCCCHHHHHHHHHHHHHHHHHTCTTSC-H
T ss_pred hcCCCccchhHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHhCCCccccccHHHHHHHHHHHHHHHHHHhCCCCC-C
Confidence 743 4788999999999997765 78889999999999999975432 12222 44444444432110 0
Q ss_pred HHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh--hcchhhhHHHHHhhccCCCC-cceeee
Q 010291 206 DFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVA--EKGVQRRVALALAHLCSPDD-QRTIFI 282 (513)
Q Consensus 206 ~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~--~~~v~~~a~~aL~~l~~~~~-~~~~l~ 282 (513)
..+..+-..+.+.|+++.|+.++..+ ...++..|+.+++.++++.. ++..+.
T Consensus 298 -------------------------~~t~~nQ~~~~~~g~l~~Ll~ll~~~~~p~~i~~~Al~tla~~irgN~~~Q~~fa 352 (651)
T 3grl_A 298 -------------------------GATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFA 352 (651)
T ss_dssp -------------------------HHHHHHHHHHHHTTHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred -------------------------CCCHHHHHHHHHCCCHHHHHHHHccCCCCHHHHHHHHHHHHHHHhCCHHHHHHHh
Confidence 00111233445677888899988874 45788889999999887644 333332
Q ss_pred cCC---------chHHHHhhhcC-CCcchhhhHHHHHHHhhhcc
Q 010291 283 DGG---------GLELLLGLLGS-TNPKQQLDGAVALFKLANKA 316 (513)
Q Consensus 283 ~~~---------~i~~L~~ll~~-~~~~v~~~a~~~L~~l~~~~ 316 (513)
+.. .+..|+.++.+ ...++|.+|+.++.....+.
T Consensus 353 ~~~vp~~~~~p~li~lL~~~~~~~~~~~lR~Aa~~cl~ay~~~N 396 (651)
T 3grl_A 353 SVNAPSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKN 396 (651)
T ss_dssp HCEESSSSCEEHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHTTC
T ss_pred hccCCCCCCcChHHHHHHHHhcccccHHHHHHHHHHHHHHHhCC
Confidence 221 23334444554 45677888888887777554
No 62
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=99.52 E-value=6.7e-13 Score=117.67 Aligned_cols=188 Identities=28% Similarity=0.312 Sum_probs=157.0
Q ss_pred CChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 3 GGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 3 g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
+.++.|+++|+++++.+|..|+..|+.+.. .+.++.|+++|.++++.+|..|+++|+.+..
T Consensus 19 ~~~~~L~~~L~~~~~~vR~~A~~~L~~~~~-----------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~-------- 79 (211)
T 3ltm_A 19 EKVEMYIKNLQDDSYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD-------- 79 (211)
T ss_dssp GGHHHHHHHTTCSSHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCSCHHHHHHHHHHHHHHCC--------
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHhCC-----------ccHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--------
Confidence 457899999999999999999999998764 2568999999999999999999999999852
Q ss_pred HHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhcccc
Q 010291 83 VLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHN 162 (513)
Q Consensus 83 ~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~ 162 (513)
.+.++.|+.++.++++.++..++++|..+.. .+.++.|+.+++++++.++..++.+|.++..
T Consensus 80 ---~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~-----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~---- 141 (211)
T 3ltm_A 80 ---ERAVEPLIKALKDEDGWVRQSAAVALGQIGD-----------ERAVEPLIKALKDEDWFVRIAAAFALGEIGD---- 141 (211)
T ss_dssp ---GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC----
T ss_pred ---HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc-----------HHHHHHHHHHHhCCCHHHHHHHHHHHHHcCC----
Confidence 2467889999999999999999999999852 2467889999999999999999999999842
Q ss_pred chhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhh
Q 010291 163 QAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIH 242 (513)
Q Consensus 163 ~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (513)
...++.|..++.++++.++..++.+|+.+..
T Consensus 142 ------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~------------------------------------------- 172 (211)
T 3ltm_A 142 ------ERAVEPLIKALKDEDGWVRQSAADALGEIGG------------------------------------------- 172 (211)
T ss_dssp ------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCS-------------------------------------------
T ss_pred ------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc-------------------------------------------
Confidence 2467789999999999999999999998743
Q ss_pred hhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCC
Q 010291 243 GRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDD 276 (513)
Q Consensus 243 ~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~ 276 (513)
...++.|..+++++++.+|..|..+|.++.....
T Consensus 173 ~~~~~~L~~~l~d~~~~vr~~A~~aL~~~~~~~~ 206 (211)
T 3ltm_A 173 ERVRAAMEKLAETGTGFARKVAVNYLETHKSFNH 206 (211)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHC------
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCC
Confidence 2256778889999999999999999999976543
No 63
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=99.51 E-value=4.6e-13 Score=132.49 Aligned_cols=293 Identities=15% Similarity=0.129 Sum_probs=214.5
Q ss_pred CChhHHHHhhccCCHHHHHHHHHHHHHhhccCch-hHHHHHhc-CCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHH
Q 010291 3 GGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDE-NKNQIVEC-NALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIK 80 (513)
Q Consensus 3 g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~-~~~~i~~~-g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~ 80 (513)
+.++.|+.+|++++..+|..++..|..++.+++. .++.+... ++++.|+.+|.++...+|..++..|.+++.++++.+
T Consensus 122 ~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n~~iQ 201 (651)
T 3grl_A 122 ENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQ 201 (651)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCCHHHH
Confidence 4588999999999999999999999999988777 88888854 999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHhhcCCCh----HHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCH------HHHHH--
Q 010291 81 KEVLAAGALQPVIGLLSSCCS----ESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDV------QLREM-- 148 (513)
Q Consensus 81 ~~~~~~g~i~~L~~ll~~~~~----~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~------~~~~~-- 148 (513)
+.+.-.|+++.|+.++..+.. .+...|+.+|.||.+.++.++..+.+.|+++.|..+++.+++ ....+
T Consensus 202 klVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~N~sNQ~~FrEt~~i~~L~~LL~~~~~~~~W~~Qk~~N~~ 281 (651)
T 3grl_A 202 KIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLH 281 (651)
T ss_dssp HHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGGGGGGCCCSCSSCCCHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHhCCCccccccHHHHHHHHH
Confidence 999999999999999987543 788999999999999999999999999999999999975432 23333
Q ss_pred -HHHHHHHHhhcc-------ccchhhHhcCChHHHHHHhcCC--CHHHHHHHHHHHHhccc-CcchHHHHHhhcCccccc
Q 010291 149 -SAFALGRLAQDM-------HNQAGIAHNGGLVPLLKLLDSK--NGSLQHNAAFALYGLAD-NEDNVADFIRVGGVQKLQ 217 (513)
Q Consensus 149 -a~~~L~~l~~~~-------~~~~~~~~~~~i~~L~~ll~~~--~~~~~~~a~~~L~~l~~-~~~~~~~~~~~g~i~~L~ 217 (513)
+..++.-++... .+|..+.+.|++..|++++..+ ...++..|+.+++.+.+ ++.++..+.+..+ +...
T Consensus 282 ~~L~iIrlLv~~~~~~~~t~~nQ~~~~~~g~l~~Ll~ll~~~~~p~~i~~~Al~tla~~irgN~~~Q~~fa~~~v-p~~~ 360 (651)
T 3grl_A 282 LMLQLVRVLVSPNNPPGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNA-PSNP 360 (651)
T ss_dssp HHHHHHHHHTCTTSCHHHHHHHHHHHHHTTHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHCEE-SSSS
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHCCCHHHHHHHHccCCCCHHHHHHHHHHHHHHHhCCHHHHHHHhhccC-CCCC
Confidence 566666666432 3477888999999999998876 47889999999999987 5555666554321 1100
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHH-hhcchhhhHHHHHhhccCCCC-cceeeecC----------C
Q 010291 218 DGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRV-AEKGVQRRVALALAHLCSPDD-QRTIFIDG----------G 285 (513)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~-~~~~v~~~a~~aL~~l~~~~~-~~~~l~~~----------~ 285 (513)
....++..|+.++.+ ...++|.+|+.++..+..+.+ .+..+... +
T Consensus 361 -----------------------~~p~li~lL~~~~~~~~~~~lR~Aa~~cl~ay~~~N~~~Q~~i~~~llp~~~~~~~~ 417 (651)
T 3grl_A 361 -----------------------PRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEIVSTLLPSTIDATGN 417 (651)
T ss_dssp -----------------------CEEHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTSSCCCCCTTS
T ss_pred -----------------------CcChHHHHHHHHhcccccHHHHHHHHHHHHHHHhCCHHHHHHHHHhcCCcccccCCC
Confidence 011123333444433 345677888888777765432 11111110 1
Q ss_pred ch---HHHHhhhcCCCcchhhhHHHHHHHhhhccccc
Q 010291 286 GL---ELLLGLLGSTNPKQQLDGAVALFKLANKATTL 319 (513)
Q Consensus 286 ~i---~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~ 319 (513)
.+ ..|..-+.+.++-----|+.++.++..+....
T Consensus 418 ~~s~g~ll~~~l~s~d~~~~wfAavil~hll~~n~~~ 454 (651)
T 3grl_A 418 TVSAGQLLCGGLFSTDSLSNWCAAVALAHALQENATQ 454 (651)
T ss_dssp SSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCcchhhhhhhccCchHHHHHHHHHHHHHHcCCHHH
Confidence 11 12344444555544445777788887765433
No 64
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=99.51 E-value=7.4e-13 Score=116.40 Aligned_cols=183 Identities=28% Similarity=0.318 Sum_probs=157.4
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHH
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEV 83 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 83 (513)
..+.++++|+++++.+|..|+..|+.+.. .+.++.|+++|.++++.+|..|+++|+.+.. +
T Consensus 15 ~~~~~i~~L~~~~~~vr~~A~~~L~~~~~-----------~~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~--~------ 75 (201)
T 3ltj_A 15 KVEMYIKNLQDDSYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD--E------ 75 (201)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--G------
T ss_pred chHHHHHHhcCCCHHHHHHHHHHHHhcCC-----------hhHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--H------
Confidence 46789999999999999999999998764 2468999999999999999999999998852 1
Q ss_pred HhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccc
Q 010291 84 LAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQ 163 (513)
Q Consensus 84 ~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~ 163 (513)
..++.|+.++.++++.++..|+++|.++.. + ..++.|+.++.++++.++..++++|..+..
T Consensus 76 ---~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~--~---------~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~----- 136 (201)
T 3ltj_A 76 ---RAVEPLIKALKDEDGWVRQSAAVALGQIGD--E---------RAVEPLIKALKDEDWFVRIAAAFALGEIGD----- 136 (201)
T ss_dssp ---GGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--G---------GGHHHHHHHTTCSSHHHHHHHHHHHHHHTC-----
T ss_pred ---HHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--H---------HHHHHHHHHHcCCCHHHHHHHHHHHHHhCC-----
Confidence 368889999999999999999999999842 1 367889999999999999999999999852
Q ss_pred hhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhh
Q 010291 164 AGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHG 243 (513)
Q Consensus 164 ~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (513)
...++.|..++.++++.++..++.+|+.+.. .
T Consensus 137 -----~~~~~~L~~~l~d~~~~vr~~A~~aL~~~~~-------------------------------------------~ 168 (201)
T 3ltj_A 137 -----ERAVEPLIKALKDEDGWVRQSAADALGEIGG-------------------------------------------E 168 (201)
T ss_dssp -----GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCS-------------------------------------------H
T ss_pred -----HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc-------------------------------------------h
Confidence 3567889999999999999999999998742 2
Q ss_pred hhHHHHHHHHHHhhcchhhhHHHHHhhcc
Q 010291 244 RVLNHLLYLMRVAEKGVQRRVALALAHLC 272 (513)
Q Consensus 244 ~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~ 272 (513)
..++.|..+++++++.+|..|..+|..+-
T Consensus 169 ~~~~~L~~~l~d~~~~vr~~A~~aL~~l~ 197 (201)
T 3ltj_A 169 RVRAAMEKLAETGTGFARKVAVNYLETHK 197 (201)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 25777888999999999999999998874
No 65
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=99.49 E-value=4.1e-13 Score=144.82 Aligned_cols=305 Identities=15% Similarity=0.074 Sum_probs=211.4
Q ss_pred hHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHH-
Q 010291 6 PPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVL- 84 (513)
Q Consensus 6 ~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~- 84 (513)
+.+++.|.++++.+|..++.+++.++..... -...+.++.+++.+.++++.++..++.+|+.++.+.+.....-.
T Consensus 93 ~~ll~~l~~~~~~vr~~~a~~i~~ia~~~~~----~~wp~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~~~~~~ 168 (852)
T 4fdd_A 93 SECLNNIGDSSPLIRATVGILITTIASKGEL----QNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVL 168 (852)
T ss_dssp HHHHTTTTCSSHHHHHHHHHHHHHHHHHTTT----TTCTTHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTHHHHCSS
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHhcCc----cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHHhchhhh
Confidence 4567778888899999999999999874311 12346788999999999999999999999999965443211100
Q ss_pred ---hCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccc
Q 010291 85 ---AAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMH 161 (513)
Q Consensus 85 ---~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~ 161 (513)
-...++.+++++.+.++++|..|+++|.++....+..... .-.++++.+...+.++++.++..++++|..++....
T Consensus 169 ~~~~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~~~~~~~-~~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~ 247 (852)
T 4fdd_A 169 DRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALML-HIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRM 247 (852)
T ss_dssp SSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTTTCHHHHT-SHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCH
T ss_pred cchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcccHHHHH-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCH
Confidence 1235677777888889999999999999987654432111 113567888889999999999999999999997544
Q ss_pred cchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhh---cCcccccchh------------h-----
Q 010291 162 NQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRV---GGVQKLQDGE------------F----- 221 (513)
Q Consensus 162 ~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~---g~i~~L~~~~------------~----- 221 (513)
..-.-.-.+.++.++..+.+.++.++..|+..+..++....... .... ..++.+.... .
T Consensus 248 ~~~~~~l~~l~~~l~~~~~~~~~~vr~~a~e~l~~l~~~~~~~~-~~~~~~~~l~p~ll~~l~~~e~d~~~~~~d~~ed~ 326 (852)
T 4fdd_A 248 DRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKD-VLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEGGS 326 (852)
T ss_dssp HHHGGGHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTSTTHHH-HHTTTHHHHHHHHHHHTSCCHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHhcchhHHH-HHHHHHHHHHHHHHHHcCCcHhHHHHhcCCccccc
Confidence 32111112466778888898999999999999999987543222 1111 1222222111 0
Q ss_pred ------hhhhhHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHHH
Q 010291 222 ------IVQATKDCVAKTLKRLEEKIHGR----VLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLL 291 (513)
Q Consensus 222 ------~~~~~~~~~~~~~~~~~~~~~~~----~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~ 291 (513)
.....+.+...++..+....... +++.+...+.++++.+|..|++++++++........-.-.+.++.++
T Consensus 327 ~~dd~~~~~~vr~~a~~~L~~la~~~~~~~~~~l~~~l~~~l~~~~~~~R~aa~~alg~i~~~~~~~~~~~l~~~l~~l~ 406 (852)
T 4fdd_A 327 GGDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLI 406 (852)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHTCSSHHHHHHHHHHHHHTTTTTHHHHGGGHHHHHHHHH
T ss_pred ccccccccchHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 00112344555555555444434 45555566666889999999999999997654221112246789999
Q ss_pred hhhcCCCcchhhhHHHHHHHhhhcc
Q 010291 292 GLLGSTNPKQQLDGAVALFKLANKA 316 (513)
Q Consensus 292 ~ll~~~~~~v~~~a~~~L~~l~~~~ 316 (513)
..+.++++.+|..+++++.+++...
T Consensus 407 ~~l~d~~~~Vr~~a~~~l~~l~~~~ 431 (852)
T 4fdd_A 407 QCLSDKKALVRSITCWTLSRYAHWV 431 (852)
T ss_dssp HHTTCSSHHHHHHHHHHHHHTHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998753
No 66
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=99.49 E-value=5.4e-13 Score=118.27 Aligned_cols=189 Identities=23% Similarity=0.248 Sum_probs=158.7
Q ss_pred cCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhH
Q 010291 44 CNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKV 123 (513)
Q Consensus 44 ~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~ 123 (513)
.+.++.|+.+|+++++.+|..|+..|+.+.. .++++.|+.++.++++.++..++++|+.+..
T Consensus 18 ~~~~~~L~~~L~~~~~~vR~~A~~~L~~~~~-----------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~------- 79 (211)
T 3ltm_A 18 PEKVEMYIKNLQDDSYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD------- 79 (211)
T ss_dssp GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCSCHHHHHHHHHHHHHHCC-------
T ss_pred HhHHHHHHHHHcCCCHHHHHHHHHHHHHhCC-----------ccHHHHHHHHHcCCCHHHHHHHHHHHHhhCC-------
Confidence 4578999999999999999999999998853 2468899999999999999999999999852
Q ss_pred HHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcch
Q 010291 124 HIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDN 203 (513)
Q Consensus 124 ~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~ 203 (513)
.+.++.|+..++++++.++..++++|..+.. ...++.|.+++.++++.++..++.+|+++...
T Consensus 80 ----~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~--- 142 (211)
T 3ltm_A 80 ----ERAVEPLIKALKDEDGWVRQSAAVALGQIGD----------ERAVEPLIKALKDEDWFVRIAAAFALGEIGDE--- 142 (211)
T ss_dssp ----GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCG---
T ss_pred ----HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc----------HHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCH---
Confidence 2467899999999999999999999999853 24678899999999999999999999987531
Q ss_pred HHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeec
Q 010291 204 VADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFID 283 (513)
Q Consensus 204 ~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~ 283 (513)
..++.|..+++++++.+|..|+.+|+.+..
T Consensus 143 ----------------------------------------~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~---------- 172 (211)
T 3ltm_A 143 ----------------------------------------RAVEPLIKALKDEDGWVRQSAADALGEIGG---------- 172 (211)
T ss_dssp ----------------------------------------GGHHHHHHHTTCSSHHHHHHHHHHHHHHCS----------
T ss_pred ----------------------------------------HHHHHHHHHHcCCCHHHHHHHHHHHHHhCc----------
Confidence 246778888988999999999999998842
Q ss_pred CCchHHHHhhhcCCCcchhhhHHHHHHHhhhccc
Q 010291 284 GGGLELLLGLLGSTNPKQQLDGAVALFKLANKAT 317 (513)
Q Consensus 284 ~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 317 (513)
...++.|..++.++++.+|..|..+|.++.....
T Consensus 173 ~~~~~~L~~~l~d~~~~vr~~A~~aL~~~~~~~~ 206 (211)
T 3ltm_A 173 ERVRAAMEKLAETGTGFARKVAVNYLETHKSFNH 206 (211)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHC------
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCC
Confidence 4578899999999999999999999999876644
No 67
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=99.48 E-value=3.6e-12 Score=118.32 Aligned_cols=222 Identities=16% Similarity=0.147 Sum_probs=170.7
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHH-HhhcCCCHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLI-LMLRSEDSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv-~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
+++.|+++|+++++.+|..|+++|+.+... +.... ..++.+. .++.++++.+|..++++|+++....+....
T Consensus 55 ~~~~L~~~l~d~~~~vR~~A~~aL~~l~~~-~~~~~-----~l~~~L~~~~~~d~~~~vr~~a~~aL~~l~~~~~~~~~- 127 (280)
T 1oyz_A 55 AVRLAIEFCSDKNYIRRDIGAFILGQIKIC-KKCED-----NVFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSP- 127 (280)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHSCCC-TTTHH-----HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGGGHH-
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhccc-cccch-----HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhccCCcccH-
Confidence 578899999999999999999999998752 22111 1233343 245678999999999999999754332222
Q ss_pred HHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhcccc
Q 010291 83 VLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHN 162 (513)
Q Consensus 83 ~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~ 162 (513)
..++.|+..+.++++.++..++++|+++.. .+.++.|+.+++++++.++..++++|..+....
T Consensus 128 ----~~~~~L~~~l~d~~~~vR~~a~~aL~~~~~-----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~-- 190 (280)
T 1oyz_A 128 ----KIVEQSQITAFDKSTNVRRATAFAISVIND-----------KATIPLLINLLKDPNGDVRNWAAFAININKYDN-- 190 (280)
T ss_dssp ----HHHHHHHHHTTCSCHHHHHHHHHHHHTC--------------CCHHHHHHHHTCSSHHHHHHHHHHHHHHTCCC--
T ss_pred ----HHHHHHHHHhhCCCHHHHHHHHHHHHhcCC-----------HHHHHHHHHHHcCCCHHHHHHHHHHHHhhccCc--
Confidence 257889999999999999999999998852 247999999999999999999999999984221
Q ss_pred chhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhh
Q 010291 163 QAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIH 242 (513)
Q Consensus 163 ~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (513)
...++.|..++.++++.++..++.+|+++..
T Consensus 191 ------~~~~~~L~~~l~d~~~~vR~~A~~aL~~~~~------------------------------------------- 221 (280)
T 1oyz_A 191 ------SDIRDCFVEMLQDKNEEVRIEAIIGLSYRKD------------------------------------------- 221 (280)
T ss_dssp ------HHHHHHHHHHTTCSCHHHHHHHHHHHHHTTC-------------------------------------------
T ss_pred ------HHHHHHHHHHhcCCCHHHHHHHHHHHHHhCC-------------------------------------------
Confidence 2356789999999999999999999998762
Q ss_pred hhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcC-CCcchhhhHHHHHH
Q 010291 243 GRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGS-TNPKQQLDGAVALF 310 (513)
Q Consensus 243 ~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~-~~~~v~~~a~~~L~ 310 (513)
...++.|+..++++ +++..++.+|+.+.. ...++.|.+++.+ +++++...+..+|.
T Consensus 222 ~~~~~~L~~~l~d~--~vr~~a~~aL~~i~~----------~~~~~~L~~~l~~~~~~~~~~~~~~~l~ 278 (280)
T 1oyz_A 222 KRVLSVLCDELKKN--TVYDDIIEAAGELGD----------KTLLPVLDTMLYKFDDNEIITSAIDKLK 278 (280)
T ss_dssp GGGHHHHHHHHTSS--SCCHHHHHHHHHHCC----------GGGHHHHHHHHTTSSCCHHHHHHHHHHT
T ss_pred HhhHHHHHHHhcCc--cHHHHHHHHHHhcCc----------hhhhHHHHHHHhcCCCcHHHHHHHHHhh
Confidence 12567777888664 499999999998853 2578999999975 66777777666553
No 68
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=99.43 E-value=1.8e-12 Score=113.84 Aligned_cols=186 Identities=24% Similarity=0.255 Sum_probs=158.3
Q ss_pred cCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhH
Q 010291 44 CNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKV 123 (513)
Q Consensus 44 ~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~ 123 (513)
.+..+.++++|+++++.+|..|+.+|+.+.. .+.++.|+.++.++++.++..++++|..+.. +
T Consensus 13 ~~~~~~~i~~L~~~~~~vr~~A~~~L~~~~~-----------~~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~--~---- 75 (201)
T 3ltj_A 13 PEKVEMYIKNLQDDSYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD--E---- 75 (201)
T ss_dssp HHHHHHHHHHTTCSCHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--G----
T ss_pred CcchHHHHHHhcCCCHHHHHHHHHHHHhcCC-----------hhHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--H----
Confidence 3567899999999999999999999998753 1468899999999999999999999999842 2
Q ss_pred HHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcch
Q 010291 124 HIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDN 203 (513)
Q Consensus 124 ~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~ 203 (513)
+.++.|+..+.++++.++..++++|.++.. ...++.|..++.++++.++..++++|+.+..
T Consensus 76 -----~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~---- 136 (201)
T 3ltj_A 76 -----RAVEPLIKALKDEDGWVRQSAAVALGQIGD----------ERAVEPLIKALKDEDWFVRIAAAFALGEIGD---- 136 (201)
T ss_dssp -----GGHHHHHHHTTCSSHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTC----
T ss_pred -----HHHHHHHHHHcCCCHHHHHHHHHHHHHhCc----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCC----
Confidence 468899999999999999999999999743 2467789999999999999999999998753
Q ss_pred HHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeec
Q 010291 204 VADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFID 283 (513)
Q Consensus 204 ~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~ 283 (513)
...++.|..++.++++.+|..|+.+|+.+. .
T Consensus 137 ---------------------------------------~~~~~~L~~~l~d~~~~vr~~A~~aL~~~~----------~ 167 (201)
T 3ltj_A 137 ---------------------------------------ERAVEPLIKALKDEDGWVRQSAADALGEIG----------G 167 (201)
T ss_dssp ---------------------------------------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHC----------S
T ss_pred ---------------------------------------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhC----------c
Confidence 125677888999999999999999999883 2
Q ss_pred CCchHHHHhhhcCCCcchhhhHHHHHHHhhh
Q 010291 284 GGGLELLLGLLGSTNPKQQLDGAVALFKLAN 314 (513)
Q Consensus 284 ~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~ 314 (513)
...++.|..++.++++.+|..|..+|.++..
T Consensus 168 ~~~~~~L~~~l~d~~~~vr~~A~~aL~~l~~ 198 (201)
T 3ltj_A 168 ERVRAAMEKLAETGTGFARKVAVNYLETHKS 198 (201)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHCC-
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 3478999999999999999999999988653
No 69
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=99.39 E-value=3.5e-12 Score=131.68 Aligned_cols=298 Identities=14% Similarity=0.087 Sum_probs=205.6
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHH
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVL 84 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~ 84 (513)
++.+.++++++++.+|..|+.+|+.++..... .......++.+..++.++++.+|..|+.+|+.++...+.. ..
T Consensus 166 ~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~~~---~~~~~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~---~~ 239 (588)
T 1b3u_A 166 RQYFRNLCSDDTPMVRRAAASKLGEFAKVLEL---DNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQE---DL 239 (588)
T ss_dssp HHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCH---HHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCHH---HH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcH---HhHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCHH---HH
Confidence 45566677888999999999999999864222 1223457888888999899999999999999998643321 12
Q ss_pred hCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccc-
Q 010291 85 AAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQ- 163 (513)
Q Consensus 85 ~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~- 163 (513)
....++.+..++.+.++.+|..++.+|+.++..... ......+++.++.+++++++.++..++++|..++......
T Consensus 240 ~~~~~~~l~~~~~d~~~~vR~~a~~~l~~l~~~~~~---~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~ 316 (588)
T 1b3u_A 240 EALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGP---EITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADC 316 (588)
T ss_dssp HHHTHHHHHHHHTCSSHHHHHHHHHTHHHHHHHHCH---HHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTT
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhCc---ccchhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhChhh
Confidence 234788888889888999999999999999853221 1233467899999999999999999999999998654322
Q ss_pred -hhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhh-hhhhHHHHHHHHHHHHHH-
Q 010291 164 -AGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFI-VQATKDCVAKTLKRLEEK- 240 (513)
Q Consensus 164 -~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~-~~~~~~~~~~~~~~~~~~- 240 (513)
........++.+..++.++++.++..++++|..++..-... ......++.+...... ....+..+..++..+...
T Consensus 317 ~~~~~~~~l~p~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~~--~~~~~l~p~l~~~l~d~~~~Vr~~a~~~l~~l~~~~ 394 (588)
T 1b3u_A 317 RENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKD--NTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVI 394 (588)
T ss_dssp HHHHHHHTHHHHHHHHHTCSCHHHHHHHHTTGGGGHHHHCHH--HHHHHTHHHHHHHHTCSCHHHHHHHHTTCHHHHHHS
T ss_pred hhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHh--HHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhc
Confidence 11223456677888999999999999999999987522111 1111222222221111 111111111222222211
Q ss_pred ----hhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcCCCcchhhhHHHHHHHhhhc
Q 010291 241 ----IHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGSTNPKQQLDGAVALFKLANK 315 (513)
Q Consensus 241 ----~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~ 315 (513)
....+++.+..++.+.++.+|..++.+++.++..-... ......++.+..++.++++.+|..|+.++..++..
T Consensus 395 ~~~~~~~~~lp~l~~~~~d~~~~vr~~~~~~l~~l~~~~~~~--~~~~~l~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~ 471 (588)
T 1b3u_A 395 GIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVE--FFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEK 471 (588)
T ss_dssp CHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCGG--GCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 23457888888888888999999999999987421111 12234678899999999999999999999998865
No 70
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=99.39 E-value=4.8e-12 Score=126.43 Aligned_cols=278 Identities=13% Similarity=0.031 Sum_probs=187.3
Q ss_pred CChhHHHHhhccC--CHHHHHHHHHHHHHhhccC-chhHHHHHhcCCHHHHHHhhcCC--CHHHHHHHHHHHHHhhcCCh
Q 010291 3 GGIPPLVELLEFT--DTKVQRAAAGALRTLAFKN-DENKNQIVECNALPTLILMLRSE--DSAIHYEAVGVIGNLVHSSP 77 (513)
Q Consensus 3 g~i~~Lv~lL~~~--~~~~~~~a~~~L~~l~~~~-~~~~~~i~~~g~i~~Lv~lL~~~--~~~v~~~a~~~L~~l~~~~~ 77 (513)
+.++.|++.++++ ++.++..|+.+|+.++... ++...... ..+++.++.+|.++ ++.+|..|+.+++++.....
T Consensus 128 ~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~-~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~ 206 (462)
T 1ibr_B 128 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKS-NEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTK 206 (462)
T ss_dssp THHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGH-HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTH
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhHH-HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4577888888888 8999999999999998743 22111111 23677888888877 79999999999999764322
Q ss_pred hHHH-HHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHH
Q 010291 78 NIKK-EVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRL 156 (513)
Q Consensus 78 ~~~~-~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l 156 (513)
.... .....-.++.+...+.+.+++++..++.+|..++...+..-...+..++++.++..+++.++.++..++..+..+
T Consensus 207 ~~~~~~~~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~a~~~l~~~ 286 (462)
T 1ibr_B 207 ANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNV 286 (462)
T ss_dssp HHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHH
T ss_pred HhhhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Confidence 1110 001111356666677788899999999999999865543221112226677788888888999999999999999
Q ss_pred hhcccc------------------chhhHh---cCChHHHHHHhcCC-------CHHHHHHHHHHHHhcccCcchHHHHH
Q 010291 157 AQDMHN------------------QAGIAH---NGGLVPLLKLLDSK-------NGSLQHNAAFALYGLADNEDNVADFI 208 (513)
Q Consensus 157 ~~~~~~------------------~~~~~~---~~~i~~L~~ll~~~-------~~~~~~~a~~~L~~l~~~~~~~~~~~ 208 (513)
+..... ...+.+ ...++.+++.+... +..++..|+.+|..++..-.. .
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~l~~~l~~~d~d~~~~~~~~r~~a~~~L~~l~~~~~~--~-- 362 (462)
T 1ibr_B 287 CDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCED--D-- 362 (462)
T ss_dssp HHHHHHHHHHHCCTTCSSSCSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTT--T--
T ss_pred HHHHHHHHHhcccccccCCCccchhHHHHHHHhhhccHHHHHHHHhcccccccccchHHHHHHHHHHHHHHhccH--H--
Confidence 864310 011111 22344455555432 235666666777666542110 0
Q ss_pred hhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCC-cceeeecCCch
Q 010291 209 RVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDD-QRTIFIDGGGL 287 (513)
Q Consensus 209 ~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~-~~~~l~~~~~i 287 (513)
.-..+++.+...+.++++.+|..|+.+++.++.+.. ....-.-...+
T Consensus 363 --------------------------------~~~~~~~~l~~~l~~~~~~~r~aal~~l~~l~~~~~~~~~~~~l~~~~ 410 (462)
T 1ibr_B 363 --------------------------------IVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAM 410 (462)
T ss_dssp --------------------------------HHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTTTTHH
T ss_pred --------------------------------HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 012356667777778899999999999999997543 11111115688
Q ss_pred HHHHhhhcCCCcchhhhHHHHHHHhhhccc
Q 010291 288 ELLLGLLGSTNPKQQLDGAVALFKLANKAT 317 (513)
Q Consensus 288 ~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 317 (513)
+.++..+.++++.+|..|+++|.+++....
T Consensus 411 ~~l~~~l~d~~~~Vr~~a~~~l~~~~~~~~ 440 (462)
T 1ibr_B 411 PTLIELMKDPSVVVRDTAAWTVGRICELLP 440 (462)
T ss_dssp HHHHHGGGCSCHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999997643
No 71
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=99.37 E-value=7.7e-12 Score=128.59 Aligned_cols=260 Identities=13% Similarity=0.095 Sum_probs=194.6
Q ss_pred CChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 3 GGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 3 g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
.+.+.+++++++++..+|..+..++..++..+++... -++..+.+-|.++++.+|..|+++|+++. .++..+.
T Consensus 49 ~~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~~~e~~~-----l~~n~l~kdL~~~n~~ir~~AL~~L~~i~--~~~~~~~ 121 (591)
T 2vgl_B 49 SLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAI-----MAVNSFVKDCEDPNPLIRALAVRTMGCIR--VDKITEY 121 (591)
T ss_dssp GGHHHHHHTTSSSCHHHHHHHHHHHHHHHHHSHHHHH-----TTHHHHGGGSSSSSHHHHHHHHHHHHTCC--SGGGHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHcccCchHHH-----HHHHHHHHHcCCCCHHHHHHHHHHHHcCC--hHHHHHH
Confidence 4567788888899999998888888888775444322 24667888888999999999999999986 3443333
Q ss_pred HHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhcccc
Q 010291 83 VLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHN 162 (513)
Q Consensus 83 ~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~ 162 (513)
.++.+..++.+.++.+|..|+.++.++...+++.. .+.++++.+..++.++++.++..|+.+|..++...+.
T Consensus 122 -----l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~~~---~~~~~~~~l~~lL~d~d~~V~~~A~~aL~~i~~~~~~ 193 (591)
T 2vgl_B 122 -----LCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV---EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPN 193 (591)
T ss_dssp -----HHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCCH---HHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSCCS
T ss_pred -----HHHHHHHHcCCCChHHHHHHHHHHHHHHhhChhhc---ccccHHHHHHHHhCCCChhHHHHHHHHHHHHHhhCCC
Confidence 35778999999999999999999999997766532 2346789999999999999999999999999976543
Q ss_pred c-hhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHh
Q 010291 163 Q-AGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKI 241 (513)
Q Consensus 163 ~-~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (513)
. ..-...+.+..|++.+.+.++..+...+.++..++..++..
T Consensus 194 ~~~~~l~~~~~~~Ll~~l~~~~~~~q~~il~~l~~l~~~~~~~------------------------------------- 236 (591)
T 2vgl_B 194 SNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDRE------------------------------------- 236 (591)
T ss_dssp CCSCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHTSCCCSHHH-------------------------------------
T ss_pred ccchhccHHHHHHHHHcCCCCCchHHHHHHHHHHHhCCCChHH-------------------------------------
Confidence 3 11112234666777777888888888999998888543210
Q ss_pred hhhhHHHHHHHHHHhhcchhhhHHHHHhhccCC----CCcceeeecCCchHHHHhhhcCCCcchhhhHHHHHHHhhhcc
Q 010291 242 HGRVLNHLLYLMRVAEKGVQRRVALALAHLCSP----DDQRTIFIDGGGLELLLGLLGSTNPKQQLDGAVALFKLANKA 316 (513)
Q Consensus 242 ~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~----~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~ 316 (513)
...+++.+..++++.++.|+..|++++.++... ++.... .-....+.|+.++. +++++|..|+.+|..+....
T Consensus 237 ~~~~l~~l~~~l~~~~~~V~~ea~~~i~~l~~~~~~~~~~~~~-~~~~~~~~L~~L~~-~d~~vr~~aL~~l~~i~~~~ 313 (591)
T 2vgl_B 237 AQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNM-LLKKLAPPLVTLLS-GEPEVQYVALRNINLIVQKR 313 (591)
T ss_dssp HHHHHHHHTTCSCSSTTHHHHHHHHHHHHSCCSCCBTTBSHHH-HHHHTHHHHHHHTT-SCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHhhccCCCHHHHHH-HHHHHHHHHHHHhc-CCccHHHHHHHHHHHHHHhC
Confidence 123566777788888999999999999999752 121111 11234566776654 78999999999999998753
No 72
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.36 E-value=2e-12 Score=97.51 Aligned_cols=79 Identities=23% Similarity=0.403 Sum_probs=64.9
Q ss_pred EEEEe-cCeeehhhHHHHhhcCHHHHHhccC--CCCCCCCCceecCCCCHHHHHHHHHHHh-----c---Cccc---cCH
Q 010291 348 VTFLV-EGRRFYAHRICLLASSDAFRAMFDG--GYREKDARDIEIPNIRWEVFELMMRFIY-----T---GSVD---VTL 413 (513)
Q Consensus 348 v~~~~-~~~~~~~h~~il~~~s~~f~~~~~~--~~~e~~~~~i~l~~~~~~~~~~~l~~~Y-----~---~~~~---~~~ 413 (513)
+.+.. +|+.|.+||.+ ++.|+||++||.+ ++.|+....|+++++++.+++.+++|+| + +.++ ++.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~ 82 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 82 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH
Confidence 44444 68999999999 9999999999987 6788888999999999999999999999 5 6676 889
Q ss_pred HHHHHHHHHHHHhc
Q 010291 414 DIAQDLLRAADQYL 427 (513)
Q Consensus 414 ~~~~~ll~~A~~~~ 427 (513)
+++.+|+.+|++|+
T Consensus 83 ~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 83 EIALELLMAANFLD 96 (97)
T ss_dssp GGHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhC
Confidence 99999999999997
No 73
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=99.35 E-value=5.4e-12 Score=130.21 Aligned_cols=298 Identities=13% Similarity=0.080 Sum_probs=204.0
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhccCch-hHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAFKNDE-NKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~-~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
.++.++++++++++.+|..|+.+|..++..-.. .+.......+++.+..+++++++.+|..++++|+.++..... .
T Consensus 282 l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~l~d~~~~vR~~a~~~l~~l~~~~~~---~ 358 (588)
T 1b3u_A 282 LVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGK---D 358 (588)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHTCSCHHHHHHHHTTGGGGHHHHCH---H
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhChhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhH---h
Confidence 356777888888889999999999888864322 121122345678888899999999999999999999743111 1
Q ss_pred HHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhcccc
Q 010291 83 VLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHN 162 (513)
Q Consensus 83 ~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~ 162 (513)
......++.+..++.+.+++++..++.+|..+....... .....+++.+..++++++..++..++.++..++..-..
T Consensus 359 ~~~~~l~p~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~---~~~~~~lp~l~~~~~d~~~~vr~~~~~~l~~l~~~~~~ 435 (588)
T 1b3u_A 359 NTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR---QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGV 435 (588)
T ss_dssp HHHHHTHHHHHHHHTCSCHHHHHHHHTTCHHHHHHSCHH---HHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHcCH
Confidence 122347888999999999999999999998887432221 12235788888999999999999999999999853222
Q ss_pred chhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhh-hhhhHHHHHHHHHHHHHH-
Q 010291 163 QAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFI-VQATKDCVAKTLKRLEEK- 240 (513)
Q Consensus 163 ~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~-~~~~~~~~~~~~~~~~~~- 240 (513)
. ......++.+..++.+++..++..|+.+++.++..-.. .......++.|...... ..........++..+...
T Consensus 436 ~--~~~~~l~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~--~~~~~~llp~l~~~~~~~~~~~R~~a~~~l~~l~~~~ 511 (588)
T 1b3u_A 436 E--FFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGK--EWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVC 511 (588)
T ss_dssp G--GCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCH--HHHHHHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred H--HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhCc--hhHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHhc
Confidence 1 12223566788889999999999999999999763221 11122334443321111 111222222333332221
Q ss_pred ----hhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcCCCcchhhhHHHHHHHhh
Q 010291 241 ----IHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGSTNPKQQLDGAVALFKLA 313 (513)
Q Consensus 241 ----~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~ 313 (513)
+...+++.|+..++++++++|..++++++.++..-... ......+|.|.+++.+.++++|..|+.++..+.
T Consensus 512 ~~~~~~~~~~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~--~~~~~~~p~l~~l~~d~d~~vr~~a~~al~~l~ 586 (588)
T 1b3u_A 512 GQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNS--TLQSEVKPILEKLTQDQDVDVKYFAQEALTVLS 586 (588)
T ss_dssp HHHHHHHHTHHHHHHGGGCSCHHHHHHHHHHHHHHGGGSCHH--HHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhhCCCCCchHHHHHHHHHHHHHHHhchh--hhHHHHHHHHHHHcCCCchhHHHHHHHHHHHhh
Confidence 23467888888888889999999999999997532211 122346678888888899999999999998764
No 74
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=99.35 E-value=4e-12 Score=137.08 Aligned_cols=275 Identities=15% Similarity=0.094 Sum_probs=195.7
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHH
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEV 83 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 83 (513)
.++.+++.++++++.+|..|+++|..+....+...... -.+.++.+..++.++++++|..|+++|..++...+..-...
T Consensus 175 il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~~~~~~~~-~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~~ 253 (852)
T 4fdd_A 175 MIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLH-IDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPH 253 (852)
T ss_dssp HHHHHTTTTTCSSHHHHHHHHHHHHTTTTTTCHHHHTS-HHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCHHHHGGG
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhcccHHHHHH-HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 45677788888999999999999998886433211111 12467888888889999999999999999997655432111
Q ss_pred HhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHH--HhcCChHHHHHHh-----------CC----------
Q 010291 84 LAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHI--VQRGAVRPLIEML-----------QS---------- 140 (513)
Q Consensus 84 ~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~--~~~~~i~~L~~~l-----------~~---------- 140 (513)
+ .+.++.++..+.+.+++++..|+.++..++... ..+..+ .-...++.++..+ .+
T Consensus 254 l-~~l~~~l~~~~~~~~~~vr~~a~e~l~~l~~~~-~~~~~~~~~~~~l~p~ll~~l~~~e~d~~~~~~d~~ed~~~dd~ 331 (852)
T 4fdd_A 254 M-HNIVEYMLQRTQDQDENVALEACEFWLTLAEQP-ICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEGGSGGDDT 331 (852)
T ss_dssp H-HHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTST-THHHHHTTTHHHHHHHHHHHTSCCHHHHHHHHC-----------
T ss_pred H-HHHHHHHHHHccCCcHHHHHHHHHHHHHHhcch-hHHHHHHHHHHHHHHHHHHHcCCcHhHHHHhcCCcccccccccc
Confidence 1 146778888888889999999999999998542 222211 1123456666666 22
Q ss_pred -CCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccch
Q 010291 141 -PDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDG 219 (513)
Q Consensus 141 -~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~ 219 (513)
.+-.++..+..+|..++..... .+. ...++.+.+++.++++.++..|+.++++++..... .+ .
T Consensus 332 ~~~~~vr~~a~~~L~~la~~~~~--~~~-~~l~~~l~~~l~~~~~~~R~aa~~alg~i~~~~~~--~~-~---------- 395 (852)
T 4fdd_A 332 ISDWNLRKCSAAALDVLANVYRD--ELL-PHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQ--GM-I---------- 395 (852)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHGG--GGH-HHHHHHHHHHHTCSSHHHHHHHHHHHHHTTTTTHH--HH-G----------
T ss_pred cccchHHHHHHHHHHHHHHhccH--HHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcchH--HH-H----------
Confidence 1123688899999999864432 222 24566778888889999999999999999975432 11 0
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCC-cceeeecCCchHHHHhhhcCCC
Q 010291 220 EFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDD-QRTIFIDGGGLELLLGLLGSTN 298 (513)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~-~~~~l~~~~~i~~L~~ll~~~~ 298 (513)
-.-..+++.++..++++++.||..+++++++++..-. ......-.+.++.|++.+.+++
T Consensus 396 --------------------~~l~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~ll~~L~~~L~d~~ 455 (852)
T 4fdd_A 396 --------------------PYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSN 455 (852)
T ss_dssp --------------------GGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHHHSCTTTTHHHHHHHHHHHHTCSS
T ss_pred --------------------HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhCCC
Confidence 0124578899999999999999999999999986311 1111112356788888898889
Q ss_pred cchhhhHHHHHHHhhhccc
Q 010291 299 PKQQLDGAVALFKLANKAT 317 (513)
Q Consensus 299 ~~v~~~a~~~L~~l~~~~~ 317 (513)
+.+|..|+++|.+++....
T Consensus 456 ~~vr~~a~~aL~~l~~~~~ 474 (852)
T 4fdd_A 456 KRVQEAACSAFATLEEEAC 474 (852)
T ss_dssp HHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999987644
No 75
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=99.33 E-value=4.1e-12 Score=130.63 Aligned_cols=182 Identities=12% Similarity=0.095 Sum_probs=136.4
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHH
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEV 83 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 83 (513)
++..+.+.|+++++.+|..|+++|+++. .++.... .++.+.++|.++++.+|+.|+.++.++...+++..
T Consensus 87 ~~n~l~kdL~~~n~~ir~~AL~~L~~i~--~~~~~~~-----l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~~~--- 156 (591)
T 2vgl_B 87 AVNSFVKDCEDPNPLIRALAVRTMGCIR--VDKITEY-----LCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV--- 156 (591)
T ss_dssp THHHHGGGSSSSSHHHHHHHHHHHHTCC--SGGGHHH-----HHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCCH---
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHcCC--hHHHHHH-----HHHHHHHHcCCCChHHHHHHHHHHHHHHhhChhhc---
Confidence 3556777788999999999999999986 3443333 36778999999999999999999999998666532
Q ss_pred HhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccc
Q 010291 84 LAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQ 163 (513)
Q Consensus 84 ~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~ 163 (513)
.+.+.++.+..+|.+.++.++..|+.+|..++..+++....-...+.+..|++.+.+.++..+...+.++..++..++..
T Consensus 157 ~~~~~~~~l~~lL~d~d~~V~~~A~~aL~~i~~~~~~~~~~~l~~~~~~~Ll~~l~~~~~~~q~~il~~l~~l~~~~~~~ 236 (591)
T 2vgl_B 157 EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDRE 236 (591)
T ss_dssp HHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSCCSCCSCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHTSCCCSHHH
T ss_pred ccccHHHHHHHHhCCCChhHHHHHHHHHHHHHhhCCCccchhccHHHHHHHHHcCCCCCchHHHHHHHHHHHhCCCChHH
Confidence 22457899999999999999999999999999776543111111234667777777788888888888887776332211
Q ss_pred hhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhccc
Q 010291 164 AGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLAD 199 (513)
Q Consensus 164 ~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~ 199 (513)
....++.+..++++.++.++..|++++..+..
T Consensus 237 ----~~~~l~~l~~~l~~~~~~V~~ea~~~i~~l~~ 268 (591)
T 2vgl_B 237 ----AQSICERVTPRLSHANSAVVLSAVKVLMKFLE 268 (591)
T ss_dssp ----HHHHHHHHTTCSCSSTTHHHHHHHHHHHHSCC
T ss_pred ----HHHHHHHHHHHHcCCChHHHHHHHHHHHHHhh
Confidence 12345667777888888999999999998864
No 76
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.23 E-value=2.3e-11 Score=98.61 Aligned_cols=98 Identities=15% Similarity=0.211 Sum_probs=83.1
Q ss_pred EEEEe-cCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecCCCCHHHHHHHHHHHhcCc------------------
Q 010291 348 VTFLV-EGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGS------------------ 408 (513)
Q Consensus 348 v~~~~-~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~------------------ 408 (513)
+.+.. +|+.|.+|+.+ +..|++|++||.+. + ...|++++++..+++.+++|+|...
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~---~-~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 78 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDL---G-MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDD 78 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHT---C-CSSEECTTCCHHHHHHHHHHHHHHTTCC---------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhc---C-CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhh
Confidence 56665 78999999998 88999999999752 1 4589999999999999999999865
Q ss_pred --------cccCHHHHHHHHHHHHHhcHHHHHHHHHHHHHhcCChhhHHH
Q 010291 409 --------VDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSS 450 (513)
Q Consensus 409 --------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~ 450 (513)
+.++.+++.+|+.||+||++.+|...|.+++...+...+.-.
T Consensus 79 i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~ee 128 (141)
T 1fs1_B 79 IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEE 128 (141)
T ss_dssp --HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHH
T ss_pred hhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHH
Confidence 567788999999999999999999999999988775444433
No 77
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=99.18 E-value=5.3e-10 Score=115.32 Aligned_cols=285 Identities=13% Similarity=0.038 Sum_probs=187.8
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHH
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEV 83 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 83 (513)
+....++++.+++...+..+.-.+..++..+++.... ++..+.+-|.++++.+|..|+++|+++.. ++..
T Consensus 71 ~~~~vik~~~s~~~~~Krl~Yl~~~~~~~~~~e~~~l-----~in~l~kDL~~~n~~vr~lAL~~L~~i~~--~~~~--- 140 (618)
T 1w63_A 71 GQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLL-----MTNCIKNDLNHSTQFVQGLALCTLGCMGS--SEMC--- 140 (618)
T ss_dssp GHHHHHHHHHSSSHHHHHHHHHHHHHHCCCCHHHHHH-----HHHHHHHHHSCSSSHHHHHHHHHHHHHCC--HHHH---
T ss_pred hHHHHHHHHcCCchHHHHHHHHHHHHHhCCCcHHHHH-----HHHHHHHhcCCCCHhHHHHHHHHHHhcCC--HHHH---
Confidence 4566778888888888888888888888755443222 36678888889999999999999999973 3322
Q ss_pred HhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccc
Q 010291 84 LAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQ 163 (513)
Q Consensus 84 ~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~ 163 (513)
...++.+..++.+.++.+|+.|+.++.++...+|+... ++++.+..++.++++.++..|+.+|..++..++..
T Consensus 141 --~~l~~~l~~~L~~~~~~VRk~A~~al~~l~~~~p~~v~-----~~~~~l~~lL~D~d~~V~~~Al~~L~~i~~~~~~~ 213 (618)
T 1w63_A 141 --RDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELME-----MFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDM 213 (618)
T ss_dssp --HHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHCGGGGG-----GGGGGTTTSTTCCCHHHHHHHHHHHHHHCCSHHHH
T ss_pred --HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHChHHHH-----HHHHHHHHHhCCCCHhHHHHHHHHHHHHHHhChHH
Confidence 23578889999999999999999999999977765432 67888889999999999999999999998654331
Q ss_pred hhhHhcCChHHHHHHhcC---------------CCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhh----hh
Q 010291 164 AGIAHNGGLVPLLKLLDS---------------KNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFI----VQ 224 (513)
Q Consensus 164 ~~~~~~~~i~~L~~ll~~---------------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~----~~ 224 (513)
... -...++.++++|.+ .++..+..++.+|+.++....... ....+.|...... ..
T Consensus 214 ~~~-~~~~v~~l~~~L~~~~~~~~~~~~~~~~~~~~~~q~~il~~L~~l~~~~~~~~----~~~~~~L~~l~~~~~~~~~ 288 (618)
T 1w63_A 214 LAH-FRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSS----EAMNDILAQVATNTETSKN 288 (618)
T ss_dssp HHH-HHTTHHHHHHHHHHHHHSCCCTTTCSSSSSCHHHHHHHHHHHHHHTTTCHHHH----HTTHHHHHHHHHTSCCSST
T ss_pred HHH-HHHHHHHHHHHHHHHHcCCCCccccccCCCCChHHHHHHHHHHHhCCCCHHHH----HHHHHHHHHHHhccccccc
Confidence 111 12566777766652 478888899999999987432211 0111111110000 00
Q ss_pred hhHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcCCCc
Q 010291 225 ATKDCVAKTLKRLEEKIH-----GRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGSTNP 299 (513)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~-----~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~~~~ 299 (513)
........+.+.+..+.. ..++..|..++.++++.+|..|+.+|..++...+. .+ ....+.++.++.+++.
T Consensus 289 ~~~aV~~ea~~~i~~l~~~~~l~~~a~~~L~~~L~~~d~~vr~~aL~~L~~i~~~~p~--~~--~~~~~~i~~~l~d~d~ 364 (618)
T 1w63_A 289 VGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHN--AV--QRHRSTIVDCLKDLDV 364 (618)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCSSTTTHHHHHHHHHHHHHHHHH--HH--GGGHHHHHHGGGSSCH
T ss_pred hHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhhCHH--HH--HHHHHHHHHHccCCCh
Confidence 011111122222211111 13566777777778888888888888877643211 11 1234566666666677
Q ss_pred chhhhHHHHHHHhhh
Q 010291 300 KQQLDGAVALFKLAN 314 (513)
Q Consensus 300 ~v~~~a~~~L~~l~~ 314 (513)
.+|..|..+|..++.
T Consensus 365 ~Ir~~alelL~~l~~ 379 (618)
T 1w63_A 365 SIKRRAMELSFALVN 379 (618)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHcc
Confidence 777777777777664
No 78
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.14 E-value=6.7e-12 Score=104.15 Aligned_cols=108 Identities=15% Similarity=0.286 Sum_probs=63.1
Q ss_pred EEEEe-cCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecCCCCHHHHHHHHHHHhcCc------------------
Q 010291 348 VTFLV-EGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGS------------------ 408 (513)
Q Consensus 348 v~~~~-~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~------------------ 408 (513)
+.+.. +|+.|.+|+.+ +..|++|+.||.+.. ....|+|++++..+++.+++|+|+..
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 81 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDD 81 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC---------------CCTTSCHHHHHHHHHC-----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccc
Confidence 44554 78999999998 889999999997642 34589999999999999999999876
Q ss_pred ---------cccCHHHHHHHHHHHHHhcHHHHHHHHHHHHHhcC---ChhhHHHHHHHHHhcC
Q 010291 409 ---------VDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDI---SLENVSSMYELSEAFH 459 (513)
Q Consensus 409 ---------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~---~~~n~~~~~~~a~~~~ 459 (513)
+.++.+++.+|+.||+||++.+|...|.+++...+ +++++..++.+...+.
T Consensus 82 ~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t 144 (160)
T 2p1m_A 82 DLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFT 144 (160)
T ss_dssp -------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCC
T ss_pred hhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCC
Confidence 34667889999999999999999999999999988 7777777776665554
No 79
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=99.14 E-value=1.8e-09 Score=111.29 Aligned_cols=282 Identities=16% Similarity=0.145 Sum_probs=189.4
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHH
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVL 84 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~ 84 (513)
+..+.+-|+++++.+|..|+++|+++.. ++.. ..+++.+.++|.++++.+|+.|+.++.++...+++..
T Consensus 109 in~l~kDL~~~n~~vr~lAL~~L~~i~~--~~~~-----~~l~~~l~~~L~~~~~~VRk~A~~al~~l~~~~p~~v---- 177 (618)
T 1w63_A 109 TNCIKNDLNHSTQFVQGLALCTLGCMGS--SEMC-----RDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELM---- 177 (618)
T ss_dssp HHHHHHHHSCSSSHHHHHHHHHHHHHCC--HHHH-----HHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHCGGGG----
T ss_pred HHHHHHhcCCCCHhHHHHHHHHHHhcCC--HHHH-----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHChHHH----
Confidence 4566777889999999999999999984 3322 2357888999999999999999999999998766542
Q ss_pred hCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCC---------------CCHHHHHHH
Q 010291 85 AAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQS---------------PDVQLREMS 149 (513)
Q Consensus 85 ~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~---------------~~~~~~~~a 149 (513)
.+.++.+..++.+.++.++..|+.+|..++..+++....+ ...++.++.+|.+ +++..+...
T Consensus 178 -~~~~~~l~~lL~D~d~~V~~~Al~~L~~i~~~~~~~~~~~--~~~v~~l~~~L~~~~~~~~~~~~~~~~~~~~~~q~~i 254 (618)
T 1w63_A 178 -EMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHF--RKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRI 254 (618)
T ss_dssp -GGGGGGTTTSTTCCCHHHHHHHHHHHHHHCCSHHHHHHHH--HTTHHHHHHHHHHHHHSCCCTTTCSSSSSCHHHHHHH
T ss_pred -HHHHHHHHHHhCCCCHhHHHHHHHHHHHHHHhChHHHHHH--HHHHHHHHHHHHHHHcCCCCccccccCCCCChHHHHH
Confidence 2578888899999999999999999999986655432222 2578888877653 488899999
Q ss_pred HHHHHHHhhccccchhhHhcCChHHHHHHhc------CCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhh-h
Q 010291 150 AFALGRLAQDMHNQAGIAHNGGLVPLLKLLD------SKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEF-I 222 (513)
Q Consensus 150 ~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~------~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~-~ 222 (513)
+.+|..++..++.. .....+.|..++. +.+..+...++.++..+...+.... .++..|..... .
T Consensus 255 l~~L~~l~~~~~~~----~~~~~~~L~~l~~~~~~~~~~~~aV~~ea~~~i~~l~~~~~l~~-----~a~~~L~~~L~~~ 325 (618)
T 1w63_A 255 LRLLRILGRNDDDS----SEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRV-----LAINILGRFLLNN 325 (618)
T ss_dssp HHHHHHHTTTCHHH----HHTTHHHHHHHHHTSCCSSTHHHHHHHHHHHHHHHSCCCHHHHH-----HHHHHHHHHHTCS
T ss_pred HHHHHHhCCCCHHH----HHHHHHHHHHHHhccccccchHHHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHHhCC
Confidence 99999998654321 1233444555543 2235677788888888765332111 11112211111 1
Q ss_pred hhhhHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcCCCc
Q 010291 223 VQATKDCVAKTLKRLEEKIH---GRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGSTNP 299 (513)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~---~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~~~~ 299 (513)
....+..+..++..+..... ......++.++.+++..+|..|+.+|..++...+.. ..++.|...+.+.++
T Consensus 326 d~~vr~~aL~~L~~i~~~~p~~~~~~~~~i~~~l~d~d~~Ir~~alelL~~l~~~~nv~------~iv~eL~~~l~~~d~ 399 (618)
T 1w63_A 326 DKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIR------GMMKELLYFLDSCEP 399 (618)
T ss_dssp STTTHHHHHHHHHHHHHHHHHHHGGGHHHHHHGGGSSCHHHHHHHHHHHHHHCCSSSTH------HHHHHHHHHHHHCCH
T ss_pred CCchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCChhHHHHHHHHHHHHcccccHH------HHHHHHHHHHHhCCH
Confidence 11222222223333222111 123456777777788889999999998888654422 135777777777888
Q ss_pred chhhhHHHHHHHhhhc
Q 010291 300 KQQLDGAVALFKLANK 315 (513)
Q Consensus 300 ~v~~~a~~~L~~l~~~ 315 (513)
+++..+..++..++..
T Consensus 400 e~r~~~v~~I~~la~k 415 (618)
T 1w63_A 400 EFKADCASGIFLAAEK 415 (618)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888888888875
No 80
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=99.12 E-value=4e-10 Score=117.43 Aligned_cols=193 Identities=15% Similarity=0.166 Sum_probs=151.2
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHH-HhhcCCCHHHHHHHHHHHHHhhcC-ChhHHH
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLI-LMLRSEDSAIHYEAVGVIGNLVHS-SPNIKK 81 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv-~lL~~~~~~v~~~a~~~L~~l~~~-~~~~~~ 81 (513)
.+.++++.|+++++..|..|+.+|.+++. ++..+..+...|++..++ .+|.+++.+||..|+++|+||+.+ ..+.+.
T Consensus 35 ~i~Pll~~L~S~~~~~r~~A~~al~~l~~-~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d~~~ 113 (684)
T 4gmo_A 35 KILPVLKDLKSPDAKSRTTAAGAIANIVQ-DAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFCV 113 (684)
T ss_dssp TTHHHHHHHSSSCCSHHHHHHHHHHHHTT-SHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred hHHHHHHHcCCCCHHHHHHHHHHHHHHHc-CcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCchHHH
Confidence 46678899999999999999999999997 788999999999988765 578889999999999999999975 367788
Q ss_pred HHHhCCChHHHHHhhcCCC---------------------hHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCC
Q 010291 82 EVLAAGALQPVIGLLSSCC---------------------SESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQS 140 (513)
Q Consensus 82 ~~~~~g~i~~L~~ll~~~~---------------------~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~ 140 (513)
.+...|+++.|..+++... .++...++.+|++|+..+......+...+.++.|+..+.+
T Consensus 114 ~l~~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~~~l~~l~~~L~~ 193 (684)
T 4gmo_A 114 HLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATKQTILRLLFRLIS 193 (684)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhcccHHHHHHHHHh
Confidence 9999999999999885311 1344567889999998888878888888999999988853
Q ss_pred ---CCHHHHHHHHHHHHHHhhcccc-chhhHhcCChH---HHHHHhcCCCHHHHHHHHHHHHhcc
Q 010291 141 ---PDVQLREMSAFALGRLAQDMHN-QAGIAHNGGLV---PLLKLLDSKNGSLQHNAAFALYGLA 198 (513)
Q Consensus 141 ---~~~~~~~~a~~~L~~l~~~~~~-~~~~~~~~~i~---~L~~ll~~~~~~~~~~a~~~L~~l~ 198 (513)
...+++..++.+|.+++.++.. ...+.+.+... .+..+..+.+ ..+..+++.|.|+.
T Consensus 194 ~~~~~~~v~~~a~~~L~~ls~dn~~~~~~i~~~~~~~~~~~ll~~~~~~~-~~~~la~giL~Ni~ 257 (684)
T 4gmo_A 194 ADIAPQDIYEEAISCLTTLSEDNLKVGQAITDDQETHVYDVLLKLATGTD-PRAVMACGVLHNVF 257 (684)
T ss_dssp HCCSCHHHHHHHHHHHHHHHTTCHHHHHHHHTCCSSCHHHHHHHHHHSSC-TTHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHHHhccCHHHHHHHHhcchHHHHHHHHHHhcCCc-HHHHHHHHHHHhHh
Confidence 2568999999999999987654 34444444432 2333333333 34566788888863
No 81
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=99.08 E-value=1.2e-09 Score=118.15 Aligned_cols=277 Identities=13% Similarity=0.024 Sum_probs=184.7
Q ss_pred CChhHHHHhhccC--CHHHHHHHHHHHHHhhccC-chhHHHHHhcCCHHHHHHhhcCC--CHHHHHHHHHHHHHhhcCCh
Q 010291 3 GGIPPLVELLEFT--DTKVQRAAAGALRTLAFKN-DENKNQIVECNALPTLILMLRSE--DSAIHYEAVGVIGNLVHSSP 77 (513)
Q Consensus 3 g~i~~Lv~lL~~~--~~~~~~~a~~~L~~l~~~~-~~~~~~i~~~g~i~~Lv~lL~~~--~~~v~~~a~~~L~~l~~~~~ 77 (513)
..++.+++.+.++ ++.++..++.+|..++..- ++... -.-..+++.+...+.++ +..+|..|+.+|..++..-.
T Consensus 128 ~ll~~l~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~-~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~ 206 (876)
T 1qgr_A 128 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQ-DKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTK 206 (876)
T ss_dssp THHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCHHHHG-GGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcCHhhHH-hHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3567888888888 8999999999999998642 12111 11123566777788765 68999999999999875422
Q ss_pred hHH-HHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHH
Q 010291 78 NIK-KEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRL 156 (513)
Q Consensus 78 ~~~-~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l 156 (513)
..- ........++.+...+.+.+.+++..++.+|..+....+......+...+++.++..+.+.++.++..++..+.++
T Consensus 207 ~~~~~~~~~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~al~~l~~l 286 (876)
T 1qgr_A 207 ANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNV 286 (876)
T ss_dssp HHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 210 0011112566777777788899999999999999866554433333446788888888888999999999999998
Q ss_pred hhcccc----------------c--hhhH---hcCChHHHHHHhcC-------CCHHHHHHHHHHHHhcccCcchHHHHH
Q 010291 157 AQDMHN----------------Q--AGIA---HNGGLVPLLKLLDS-------KNGSLQHNAAFALYGLADNEDNVADFI 208 (513)
Q Consensus 157 ~~~~~~----------------~--~~~~---~~~~i~~L~~ll~~-------~~~~~~~~a~~~L~~l~~~~~~~~~~~ 208 (513)
+..... + .... -...++.+++.+.. .+..++..+..++..++..-..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~~~~d~~~~~~~~r~~a~~~l~~l~~~~~~----- 361 (876)
T 1qgr_A 287 CDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCED----- 361 (876)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGG-----
T ss_pred HHHHHhHhhhhccccccCCCccchhHHHHHHHHHHHhHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHCcH-----
Confidence 854210 0 0000 01223445555532 2344555566666555431110
Q ss_pred hhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCC-c-ceeeecCCc
Q 010291 209 RVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDD-Q-RTIFIDGGG 286 (513)
Q Consensus 209 ~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~-~-~~~l~~~~~ 286 (513)
..-..+++.+...+.++++.+|..|+++++.++.... . ... .-...
T Consensus 362 -------------------------------~~~~~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~-~~~~~ 409 (876)
T 1qgr_A 362 -------------------------------DIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKP-LVIQA 409 (876)
T ss_dssp -------------------------------GGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHH-HHHHH
T ss_pred -------------------------------hhHHHHHHHHHHHccCCChHHHHHHHHHHHHHHcCCCHHHHHH-HHHHH
Confidence 0012355666667777889999999999999987533 1 111 11346
Q ss_pred hHHHHhhhcCCCcchhhhHHHHHHHhhhccc
Q 010291 287 LELLLGLLGSTNPKQQLDGAVALFKLANKAT 317 (513)
Q Consensus 287 i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 317 (513)
++.++..+.++++.+|..|++++.+++....
T Consensus 410 l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~ 440 (876)
T 1qgr_A 410 MPTLIELMKDPSVVVRDTAAWTVGRICELLP 440 (876)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHhCc
Confidence 8889999999999999999999999997643
No 82
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=99.05 E-value=2.9e-09 Score=119.37 Aligned_cols=272 Identities=15% Similarity=0.101 Sum_probs=192.3
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHH
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVL 84 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~ 84 (513)
++.+++-+.++++++|..|...|.+...........-....+++.+++.|.++++.+|..|+.+|+.++...+.. .+
T Consensus 8 l~~lL~~l~s~d~~~R~~A~~~L~~~l~~~~~~~~~~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~~--~~- 84 (1230)
T 1u6g_C 8 ISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEY--QV- 84 (1230)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHH--HH-
T ss_pred HHHHHHhcCCCCHhHHHHHHHHHHHHHcccccCCChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCHH--HH-
Confidence 567788888999999999999998876532111000111245778889999999999999999999998654331 11
Q ss_pred hCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchh-----hHHHHhcCChHHHHHHhC-CCCHHHHHHHHHHHHHHhh
Q 010291 85 AAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDC-----KVHIVQRGAVRPLIEMLQ-SPDVQLREMSAFALGRLAQ 158 (513)
Q Consensus 85 ~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~-----~~~~~~~~~i~~L~~~l~-~~~~~~~~~a~~~L~~l~~ 158 (513)
..+++.++..+.++++.+|..++.+|..++..-... ...-....+++.|+..+. ++++.++..++.++..++.
T Consensus 85 -~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~ 163 (1230)
T 1u6g_C 85 -ETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLS 163 (1230)
T ss_dssp -HHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHH
Confidence 235778888888888999999999999988543322 011123457889999998 5889999999999999985
Q ss_pred ccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHH
Q 010291 159 DMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLE 238 (513)
Q Consensus 159 ~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~ 238 (513)
.....-.-.....++.++..+.+++..++..|+.++..++...... +
T Consensus 164 ~~~~~l~~~~~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~~--~------------------------------- 210 (1230)
T 1u6g_C 164 RQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNI--V------------------------------- 210 (1230)
T ss_dssp HTCSSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC-------------------------------------
T ss_pred HhHhHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcCHH--H-------------------------------
Confidence 3322111111345666778888888999999999999998643210 0
Q ss_pred HHhhhhhHHHHHHHHHHhh-cchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcCCCcchhhhHHHHHHHhhhcc
Q 010291 239 EKIHGRVLNHLLYLMRVAE-KGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGSTNPKQQLDGAVALFKLANKA 316 (513)
Q Consensus 239 ~~~~~~~l~~Lv~lL~~~~-~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~ 316 (513)
-..+++.++..|.+.+ ..++..++.+++.++........-.-...++.+.+.+.+.++++|..+..++..++...
T Consensus 211 ---~~~~l~~l~~~L~~~~~~~~r~~a~~~l~~l~~~~~~~~~~~l~~l~~~ll~~l~d~~~~vR~~a~~~l~~l~~~~ 286 (1230)
T 1u6g_C 211 ---FVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRC 286 (1230)
T ss_dssp ---CTTHHHHHHHHHHHTCSSCSCTTHHHHHHHHHHHSSGGGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHHHHHHCT
T ss_pred ---HHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHC
Confidence 1235677777777643 57888999999998753221111112467899999999999999999999999888753
No 83
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=99.04 E-value=2e-09 Score=116.32 Aligned_cols=307 Identities=12% Similarity=0.049 Sum_probs=186.5
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhccCc-hhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHH-HH
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFKND-ENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIK-KE 82 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~-~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~-~~ 82 (513)
++.+.+.++++++.+|..|+.+++.++.+.. +...... ..+++.+++.+.++++.+|..++++|+.++....... ..
T Consensus 371 ~~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~l-~~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~ 449 (861)
T 2bpt_A 371 LEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYV-HQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQ 449 (861)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHH-HHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSCTT
T ss_pred HHHHHHHcCCCChhHHHHHHHHHHHHHcCCCHHHHHHHH-HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHhhhhcCCH
Confidence 3455566678889999999999999997532 2222222 2468889999999999999999999999985421100 00
Q ss_pred HHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCc----hhhHHHHhcCChHHHHHHhCCC--CHHHHHHHHHHHHHH
Q 010291 83 VLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDS----DCKVHIVQRGAVRPLIEMLQSP--DVQLREMSAFALGRL 156 (513)
Q Consensus 83 ~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~----~~~~~~~~~~~i~~L~~~l~~~--~~~~~~~a~~~L~~l 156 (513)
-.-..+++.++..+.++ +.++..++++|.+++.... ...... -..+++.|+..+++. ++.++..++.++..+
T Consensus 450 ~~~~~~l~~l~~~l~~~-~~v~~~a~~al~~l~~~~~~~~~~~l~~~-~~~il~~L~~~l~~~d~~~~vr~~a~~al~~l 527 (861)
T 2bpt_A 450 QHLPGVVQACLIGLQDH-PKVATNCSWTIINLVEQLAEATPSPIYNF-YPALVDGLIGAANRIDNEFNARASAFSALTTM 527 (861)
T ss_dssp TTHHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHSSSSSCGGGGG-HHHHHHHHHHHHTCSCCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccC-hHHHHHHHHHHHHHHHhcccccchhhHHH-HHHHHHHHHHHHhCcCcchHHHHHHHHHHHHH
Confidence 00113567778888765 8999999999999985421 111111 134577888888854 378999999999999
Q ss_pred hhccccchhhHhcCChHHHHHHhcCC---------------CHHHHHHHHHHHHhcccCcch-HHHHHhhcCcccccchh
Q 010291 157 AQDMHNQAGIAHNGGLVPLLKLLDSK---------------NGSLQHNAAFALYGLADNEDN-VADFIRVGGVQKLQDGE 220 (513)
Q Consensus 157 ~~~~~~~~~~~~~~~i~~L~~ll~~~---------------~~~~~~~a~~~L~~l~~~~~~-~~~~~~~g~i~~L~~~~ 220 (513)
+........-.-...++.+++.+... ...++..++.+|.+++..-.. ..... ...++.+....
T Consensus 528 ~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~-~~l~~~l~~~l 606 (861)
T 2bpt_A 528 VEYATDTVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVA-DMLMGLFFRLL 606 (861)
T ss_dssp HHHCCGGGHHHHHHHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGTGGGH-HHHHHHHHHHH
T ss_pred HHHcchhhHHHHHHHHHHHHHHHHHHHhhhcccCChhhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHHH
Confidence 86544321111123445555555421 245677888888888752211 00000 01111111111
Q ss_pred hhh-h-hhHHHHHHHHHHHHHH-------hhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHHH
Q 010291 221 FIV-Q-ATKDCVAKTLKRLEEK-------IHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLL 291 (513)
Q Consensus 221 ~~~-~-~~~~~~~~~~~~~~~~-------~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~ 291 (513)
... . ........++..+... +-..+++.++..+.+.++.++..++.+++.++..-.....-.-...++.+.
T Consensus 607 ~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~l~~i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~l~~~l~ 686 (861)
T 2bpt_A 607 EKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLA 686 (861)
T ss_dssp HSTTGGGTHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTGGGGHHHHHHHHHHHH
T ss_pred ccCCCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhchhccchHHHHHHHHH
Confidence 100 1 2222222223222221 123477888888877888899999999998875322111111124566777
Q ss_pred hhhcCCC--cchhhhHHHHHHHhhhc
Q 010291 292 GLLGSTN--PKQQLDGAVALFKLANK 315 (513)
Q Consensus 292 ~ll~~~~--~~v~~~a~~~L~~l~~~ 315 (513)
+.+.+.+ ++++..+..++..++..
T Consensus 687 ~~l~~~~~~~~vr~~~~~~l~~l~~~ 712 (861)
T 2bpt_A 687 QMISNPNARRELKPAVLSVFGDIASN 712 (861)
T ss_dssp HHHHCTTCCTTHHHHHHHHHHHHHHH
T ss_pred HHhCCccccHhhhHHHHHHHHHHHHH
Confidence 7777654 88999999999998875
No 84
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=99.04 E-value=2.5e-08 Score=102.51 Aligned_cols=295 Identities=13% Similarity=0.077 Sum_probs=196.1
Q ss_pred CCChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHH
Q 010291 2 EGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 81 (513)
Q Consensus 2 ~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 81 (513)
+.+...+++++.+++...+..+.-++..++..+++.... ++..+.+=|.++|+.+|..|+++|+++.. ++..+
T Consensus 73 s~~~~~vvkl~~s~~~~~Krl~YL~l~~~~~~~~e~~~L-----~iN~l~kDl~~~n~~ir~lALr~L~~i~~--~e~~~ 145 (621)
T 2vgl_A 73 DFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRL-----INNAIKNDLASRNPTFMGLALHCIANVGS--REMAE 145 (621)
T ss_dssp CSCHHHHHHGGGCSCHHHHHHHHHHHHHSCCCCHHHHHH-----HHHHHHHHHHSCCHHHHHHHHHHHHHHCC--HHHHH
T ss_pred chhHHHHHHHhcCCCHHHHHHHHHHHHHHccCCcHHHHH-----HHHHHHHhcCCCCHHHHHHHHHHhhccCC--HHHHH
Confidence 456778889999999999999999999999866554322 25567777789999999999999999963 44322
Q ss_pred HHHhCCChHHHHHhh--cCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhc
Q 010291 82 EVLAAGALQPVIGLL--SSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 82 ~~~~~g~i~~L~~ll--~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~ 159 (513)
..++.+.+++ .+.++.+|+.|+.++.++...+|+... ..++++.+.++|.++++.++..|+.++..++..
T Consensus 146 -----~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~p~~~~---~~~~~~~l~~lL~d~d~~V~~~a~~~l~~i~~~ 217 (621)
T 2vgl_A 146 -----AFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVP---MGDWTSRVVHLLNDQHLGVVTAATSLITTLAQK 217 (621)
T ss_dssp -----HHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGGGCC---CCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhChhhcC---chhHHHHHHHHhCCCCccHHHHHHHHHHHHHHh
Confidence 3578889999 889999999999999999976665322 247999999999999999999999999999864
Q ss_pred cccchhhHhcCChHHHHHHhcCC-------------CHHHHHHHHHHHHhcccCc--chHHHHHhhcCcccccchh----
Q 010291 160 MHNQAGIAHNGGLVPLLKLLDSK-------------NGSLQHNAAFALYGLADNE--DNVADFIRVGGVQKLQDGE---- 220 (513)
Q Consensus 160 ~~~~~~~~~~~~i~~L~~ll~~~-------------~~~~~~~a~~~L~~l~~~~--~~~~~~~~~g~i~~L~~~~---- 220 (513)
.+..-.-.-...+..|.+++..+ ++..+...+..+..++..+ +....+.+ .+..++...
T Consensus 218 ~~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~~~~w~qi~il~ll~~~~~~~d~~~~~~l~~--~L~~il~~~~~~~ 295 (621)
T 2vgl_A 218 NPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTE--CLETILNKAQEPP 295 (621)
T ss_dssp CHHHHTTHHHHHHHHHHHHHHCCSSSCSTTEETTEESHHHHHHHHHHGGGSSSCSSHHHHHHHHH--HHHHHHHHHHSCC
T ss_pred ChHHHHHHHHHHHHHHHHHHhCCCCCccchhhcCCCCchHHHHHHHHHHHhCCCCCHHHHHHHHH--HHHHHHHhhccCc
Confidence 43210000011222333444322 5788888999999888632 22222211 111111100
Q ss_pred ----hhhhh-hHHHHHHHHHHHHHHh-----hhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHH
Q 010291 221 ----FIVQA-TKDCVAKTLKRLEEKI-----HGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELL 290 (513)
Q Consensus 221 ----~~~~~-~~~~~~~~~~~~~~~~-----~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L 290 (513)
..... .....-.+.+.+..+. -..++..|..+|.++++++|..++.+|..++...+....+ ......+
T Consensus 296 ks~~l~~~n~~~aVl~ea~~~i~~l~~~~~~~~~~~~~L~~~L~~~~~niry~aL~~l~~l~~~~~~~~~~--~~~~~~i 373 (621)
T 2vgl_A 296 KSKKVQHSNAKNAVLFEAISLIIHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAV--KTHIETV 373 (621)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHTTCTTTHHHH--HTTHHHH
T ss_pred ccccccccchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhccCcHHHH--HHHHHHH
Confidence 00000 0112222222222221 1235677778887788999999999999998653211122 2345677
Q ss_pred Hhhhc-CCCcchhhhHHHHHHHhhhc
Q 010291 291 LGLLG-STNPKQQLDGAVALFKLANK 315 (513)
Q Consensus 291 ~~ll~-~~~~~v~~~a~~~L~~l~~~ 315 (513)
+..+. +++..++..+...|..++..
T Consensus 374 ~~~L~~d~d~~Ir~~aL~lL~~l~~~ 399 (621)
T 2vgl_A 374 INALKTERDVSVRQRAVDLLYAMCDR 399 (621)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHCCH
T ss_pred HHHhccCCCHhHHHHHHHHHHHHcCh
Confidence 77777 88888999999988888754
No 85
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=99.03 E-value=2.4e-09 Score=115.71 Aligned_cols=303 Identities=15% Similarity=0.138 Sum_probs=190.7
Q ss_pred hhHHHHhhcc-------CCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCCh
Q 010291 5 IPPLVELLEF-------TDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSP 77 (513)
Q Consensus 5 i~~Lv~lL~~-------~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~ 77 (513)
+|.++..|.. +++.++..|..+|..++.... ..+. ..+++.+.+.+.+++..+|..|+.+++.++....
T Consensus 326 l~~ll~~l~~~~~d~~d~~~~~r~~a~~~L~~l~~~~~---~~~~-~~l~~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~ 401 (861)
T 2bpt_A 326 VPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCG---NHIL-EPVLEFVEQNITADNWRNREAAVMAFGSIMDGPD 401 (861)
T ss_dssp HHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHG---GGGH-HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSC
T ss_pred HHHHHHHHHhcccccccccCcHHHHHHHHHHHHHHHcc---HhHH-HHHHHHHHHHcCCCChhHHHHHHHHHHHHHcCCC
Confidence 4566666653 235789999999999986322 1111 1245666677778889999999999999997642
Q ss_pred -hHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhh-HHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHH
Q 010291 78 -NIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCK-VHIVQRGAVRPLIEMLQSPDVQLREMSAFALGR 155 (513)
Q Consensus 78 -~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~-~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~ 155 (513)
..-...+ ..+++.++..+.++++.++..++++++.++....... ..-.-..+++.++..++++ +.++..++++|.+
T Consensus 402 ~~~~~~~l-~~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~~l~~~-~~v~~~a~~al~~ 479 (861)
T 2bpt_A 402 KVQRTYYV-HQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDH-PKVATNCSWTIIN 479 (861)
T ss_dssp HHHHHHHH-HHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSCTTTTHHHHHHHHHHHHTSC-HHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHhccC-hHHHHHHHHHHHH
Confidence 2111122 2468888999999999999999999999984422110 0001124577888888776 8999999999999
Q ss_pred Hhhcccc--chhh--HhcCChHHHHHHhcCCC--HHHHHHHHHHHHhcccCcc-hHHHHHhhcCcccccchhhh------
Q 010291 156 LAQDMHN--QAGI--AHNGGLVPLLKLLDSKN--GSLQHNAAFALYGLADNED-NVADFIRVGGVQKLQDGEFI------ 222 (513)
Q Consensus 156 l~~~~~~--~~~~--~~~~~i~~L~~ll~~~~--~~~~~~a~~~L~~l~~~~~-~~~~~~~~g~i~~L~~~~~~------ 222 (513)
++..... ...+ .-...++.|++.+.+.+ +.++..++.+++.++.... ....... ..++.+++....
T Consensus 480 l~~~~~~~~~~~l~~~~~~il~~L~~~l~~~d~~~~vr~~a~~al~~l~~~~~~~~~~~~~-~l~~~l~~~l~~~~~~~~ 558 (861)
T 2bpt_A 480 LVEQLAEATPSPIYNFYPALVDGLIGAANRIDNEFNARASAFSALTTMVEYATDTVAETSA-SISTFVMDKLGQTMSVDE 558 (861)
T ss_dssp HHHHHSSSSSCGGGGGHHHHHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHCCGGGHHHHH-HHHHHHHHHHHHHTTSCG
T ss_pred HHHhcccccchhhHHHHHHHHHHHHHHHhCcCcchHHHHHHHHHHHHHHHHcchhhHHHHH-HHHHHHHHHHHHHHhhhc
Confidence 9865321 1111 11244667788887544 7889999999999876322 2211111 122222221110
Q ss_pred ----------hhhhHHHHHHHHHHHHHHh-------hhhhHHHHHHHHHHhhc-chhhhHHHHHhhccCCCC--cceeee
Q 010291 223 ----------VQATKDCVAKTLKRLEEKI-------HGRVLNHLLYLMRVAEK-GVQRRVALALAHLCSPDD--QRTIFI 282 (513)
Q Consensus 223 ----------~~~~~~~~~~~~~~~~~~~-------~~~~l~~Lv~lL~~~~~-~v~~~a~~aL~~l~~~~~--~~~~l~ 282 (513)
.......+..++..+.... -..+++.++..+++.+. .++..++.+++.++.... ....+
T Consensus 559 ~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~l- 637 (861)
T 2bpt_A 559 NQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYL- 637 (861)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHGGGGHHHH-
T ss_pred ccCChhhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHccCCCCcHHHHHHHHHHHHHHHHhhhHHHHH-
Confidence 0001111222232222211 23466777778877766 899999999999875322 11111
Q ss_pred cCCchHHHHhhhcCCCcchhhhHHHHHHHhhhcc
Q 010291 283 DGGGLELLLGLLGSTNPKQQLDGAVALFKLANKA 316 (513)
Q Consensus 283 ~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~ 316 (513)
...++.|...+.++++.++..+..++..++...
T Consensus 638 -~~i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~ 670 (861)
T 2bpt_A 638 -ETFSPYLLKALNQVDSPVSITAVGFIADISNSL 670 (861)
T ss_dssp -HHHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHh
Confidence 236788888888888899999999998887653
No 86
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=98.99 E-value=3.2e-09 Score=110.60 Aligned_cols=158 Identities=18% Similarity=0.205 Sum_probs=126.3
Q ss_pred CCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHH-HHhhcCCChHHHHHHHHHHHHhhcC-Cchhh
Q 010291 45 NALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPV-IGLLSSCCSESQREAALLLGQFAAT-DSDCK 122 (513)
Q Consensus 45 g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L-~~ll~~~~~~~~~~a~~~L~~l~~~-~~~~~ 122 (513)
+.+.++++.|+++++..|..|+++|++|+.+ +..++.+...|++..+ ..+|.+++.+++..|+++|+||+.. .++..
T Consensus 34 ~~i~Pll~~L~S~~~~~r~~A~~al~~l~~~-~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d~~ 112 (684)
T 4gmo_A 34 DKILPVLKDLKSPDAKSRTTAAGAIANIVQD-AKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFC 112 (684)
T ss_dssp HTTHHHHHHHSSSCCSHHHHHHHHHHHHTTS-HHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred hhHHHHHHHcCCCCHHHHHHHHHHHHHHHcC-cHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCchHH
Confidence 3466678889999999999999999999975 7888888888888765 5578889999999999999999954 45667
Q ss_pred HHHHhcCChHHHHHHhCCC--------------C-------HHHHHHHHHHHHHHhhcccc-chhhHhcCChHHHHHHhc
Q 010291 123 VHIVQRGAVRPLIEMLQSP--------------D-------VQLREMSAFALGRLAQDMHN-QAGIAHNGGLVPLLKLLD 180 (513)
Q Consensus 123 ~~~~~~~~i~~L~~~l~~~--------------~-------~~~~~~a~~~L~~l~~~~~~-~~~~~~~~~i~~L~~ll~ 180 (513)
..+...|++++|..++++. . ..+..+++.+|++||..... ...+...++++.|+..+.
T Consensus 113 ~~l~~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~~~l~~l~~~L~ 192 (684)
T 4gmo_A 113 VHLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATKQTILRLLFRLI 192 (684)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhcccHHHHHHHHH
Confidence 7888999999999888521 1 13456788999999966544 456677888998888875
Q ss_pred CC---CHHHHHHHHHHHHhcccCcch
Q 010291 181 SK---NGSLQHNAAFALYGLADNEDN 203 (513)
Q Consensus 181 ~~---~~~~~~~a~~~L~~l~~~~~~ 203 (513)
+. ..+++..|+.+|..++.+...
T Consensus 193 ~~~~~~~~v~~~a~~~L~~ls~dn~~ 218 (684)
T 4gmo_A 193 SADIAPQDIYEEAISCLTTLSEDNLK 218 (684)
T ss_dssp HHCCSCHHHHHHHHHHHHHHHTTCHH
T ss_pred hcCCCcHHHHHHHHHHHHHHhccCHH
Confidence 43 367999999999999985543
No 87
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=98.98 E-value=1e-08 Score=110.88 Aligned_cols=274 Identities=14% Similarity=0.111 Sum_probs=187.3
Q ss_pred hhHHHHhhccC--CHHHHHHHHHHHHHhhccCchhH-HHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHH
Q 010291 5 IPPLVELLEFT--DTKVQRAAAGALRTLAFKNDENK-NQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 81 (513)
Q Consensus 5 i~~Lv~lL~~~--~~~~~~~a~~~L~~l~~~~~~~~-~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 81 (513)
++.+.+.++++ ++.+|..|+.++..++..-.... .......+++.+.+.+.+.+.++|..++.+|..++...+..-.
T Consensus 174 l~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~ 253 (876)
T 1qgr_A 174 LTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYME 253 (876)
T ss_dssp HHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCH
T ss_pred HHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 45566777766 68999999999999875322211 1111112566777777788899999999999999876554322
Q ss_pred HHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCch------------------hhHHH--HhcCChHHHHHHhCC-
Q 010291 82 EVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSD------------------CKVHI--VQRGAVRPLIEMLQS- 140 (513)
Q Consensus 82 ~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~------------------~~~~~--~~~~~i~~L~~~l~~- 140 (513)
..+....++.+...+.+.+++++..++..+.+++..... ..... .-...++.++..+..
T Consensus 254 ~~~~~~l~~~~~~~~~~~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~~ 333 (876)
T 1qgr_A 254 TYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQ 333 (876)
T ss_dssp HHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhHhhhhccccccCCCccchhHHHHHHHHHHHhHHHHHHhhcc
Confidence 333336778888888888899999999998888743100 00000 012356677777753
Q ss_pred ------CCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcc
Q 010291 141 ------PDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQ 214 (513)
Q Consensus 141 ------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~ 214 (513)
++..++..+..+|..++..... .+. ...++.+...+.++++.++..++.+++.++...... .+
T Consensus 334 ~~d~~~~~~~~r~~a~~~l~~l~~~~~~--~~~-~~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~-~~------- 402 (876)
T 1qgr_A 334 DENDDDDDWNPCKAAGVCLMLLATCCED--DIV-PHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPS-QL------- 402 (876)
T ss_dssp CSSCCTTCCCHHHHHHHHHHHHHHHHGG--GGH-HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHH-HH-------
T ss_pred cccccccccHHHHHHHHHHHHHHHHCcH--hhH-HHHHHHHHHHccCCChHHHHHHHHHHHHHHcCCCHH-HH-------
Confidence 3456889999999999864431 222 244556677788889999999999999998743210 00
Q ss_pred cccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCc----ceeeecCCchHHH
Q 010291 215 KLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQ----RTIFIDGGGLELL 290 (513)
Q Consensus 215 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~----~~~l~~~~~i~~L 290 (513)
.. .-..+++.++..+.++++.+|..|++++++++..-.. ...+ ...++.|
T Consensus 403 -----------------------~~-~~~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~l--~~~l~~l 456 (876)
T 1qgr_A 403 -----------------------KP-LVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYL--APLLQCL 456 (876)
T ss_dssp -----------------------HH-HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTSSTTTH--HHHHHHH
T ss_pred -----------------------HH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCchhcccHHHH--HHHHHHH
Confidence 00 1234788899999999999999999999999864221 1111 2456778
Q ss_pred HhhhcCCCcchhhhHHHHHHHhhhcc
Q 010291 291 LGLLGSTNPKQQLDGAVALFKLANKA 316 (513)
Q Consensus 291 ~~ll~~~~~~v~~~a~~~L~~l~~~~ 316 (513)
+..+.++ +.++..+++++.+++...
T Consensus 457 ~~~l~~~-~~v~~~a~~al~~l~~~~ 481 (876)
T 1qgr_A 457 IEGLSAE-PRVASNVCWAFSSLAEAA 481 (876)
T ss_dssp HHHTTSC-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCC-HHHHHHHHHHHHHHHHHh
Confidence 8888774 889999999999998764
No 88
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=98.95 E-value=5.6e-08 Score=82.64 Aligned_cols=187 Identities=19% Similarity=0.152 Sum_probs=151.1
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHH
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEV 83 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 83 (513)
.+..|.++|...|+.++.+|+.+|..+...-+.......-...++.++.++++.|..+...|+++|..+..+.+-..+.+
T Consensus 34 ~l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL~~~~y 113 (265)
T 3b2a_A 34 ALFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVKDVPMGSKTF 113 (265)
T ss_dssp HHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCHHHH
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCCCHHHH
Confidence 35678899999999999999999999998644444444444579999999999999999999999999998766554444
Q ss_pred HhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccc
Q 010291 84 LAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQ 163 (513)
Q Consensus 84 ~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~ 163 (513)
.. ...++..++.++++-++.+++..++.+-..++. .+++..+.+++.+.|++++..+..++.+++....+.
T Consensus 114 ~K--l~~aL~dlik~~~~il~~eaae~Lgklkv~~~~-------~~V~~~l~sLl~Skd~~vK~agl~~L~eia~~S~D~ 184 (265)
T 3b2a_A 114 LK--AAKTLVSLLESPDDMMRIETIDVLSKLQPLEDS-------KLVRTYINELVVSPDLYTKVAGFCLFLNMLNSSADS 184 (265)
T ss_dssp HH--HHHHHHHHTTSCCHHHHHHHHHHHHHCCBSCCC-------HHHHHHHHHHHTCSSHHHHHHHHHHHHHHGGGCSSC
T ss_pred HH--HHHHHHHHhcCCCchHHHHHHHHhCcCCcccch-------HHHHHHHHHHHhCCChhHHHHHHHHHHHhhcccCCH
Confidence 33 567888899999999999999999999422222 135778899999999999999999999999766554
Q ss_pred hhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCc
Q 010291 164 AGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNE 201 (513)
Q Consensus 164 ~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~ 201 (513)
..+ .+.+..+-.++.+.|+.+++.|+.++-.+...+
T Consensus 185 ~i~--~~I~~eI~elL~~eD~~l~e~aLd~Le~ils~p 220 (265)
T 3b2a_A 185 GHL--TLILDEIPSLLQNDNEFIVELALDVLEKALSFP 220 (265)
T ss_dssp CCG--GGTTTTHHHHHTCSCHHHHHHHHHHHHHHTTSC
T ss_pred HHH--HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCc
Confidence 433 256667889999999999999999999988754
No 89
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=98.90 E-value=2.1e-09 Score=107.24 Aligned_cols=283 Identities=10% Similarity=0.017 Sum_probs=183.3
Q ss_pred HHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCC--CHHHHHHHHHHHHHhhcCC-hhHHHHH
Q 010291 7 PLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSE--DSAIHYEAVGVIGNLVHSS-PNIKKEV 83 (513)
Q Consensus 7 ~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~--~~~v~~~a~~~L~~l~~~~-~~~~~~~ 83 (513)
.+++.|.++++.+ ..++.+++.++...... -...+.++.+++.+.++ ++.++..++.+|+.++.+. +......
T Consensus 94 ~ll~~l~~~~~~v-~~~~~~i~~ia~~~~~~---~~w~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~ 169 (462)
T 1ibr_B 94 YVLQTLGTETYRP-SSASQCVAGIACAEIPV---NQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDK 169 (462)
T ss_dssp HHHHHTTCCCSSS-CSHHHHHHHHHHHHGGG---TCCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGG
T ss_pred HHHHHhCCCCchh-hHHHHHHHHHHHHhccc---cccHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhH
Confidence 4666777777777 78888888888632110 01346788999999988 8999999999999998643 2110111
Q ss_pred HhCCChHHHHHhhcCC--ChHHHHHHHHHHHHhhcCCchhhH-HHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhcc
Q 010291 84 LAAGALQPVIGLLSSC--CSESQREAALLLGQFAATDSDCKV-HIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDM 160 (513)
Q Consensus 84 ~~~g~i~~L~~ll~~~--~~~~~~~a~~~L~~l~~~~~~~~~-~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~ 160 (513)
. ..+++.++..+.+. ++.++..|++++.++...-..... .....-+++.+...+.+++++++..++++|..++...
T Consensus 170 ~-~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~ 248 (462)
T 1ibr_B 170 S-NEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLY 248 (462)
T ss_dssp H-HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHC
T ss_pred H-HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 13677788888887 789999999999997633221110 0111114666777778889999999999999998654
Q ss_pred ccch-hhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcC---c---ccccchhhhhhhhHHHHHHH
Q 010291 161 HNQA-GIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGG---V---QKLQDGEFIVQATKDCVAKT 233 (513)
Q Consensus 161 ~~~~-~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~---i---~~L~~~~~~~~~~~~~~~~~ 233 (513)
...- .....+.++.++..+.+.++.++..++..+..++.............. - ..... ..
T Consensus 249 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~--- 315 (462)
T 1ibr_B 249 YQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKF----------YA--- 315 (462)
T ss_dssp GGGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSSCSSCCCCC----------HH---
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccchhHH----------HH---
Confidence 4321 111115566677778888999999999999988864321111111000 0 00000 00
Q ss_pred HHHHHHHhhhhhHHHHHHHHHH-------hhcchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcCCCcchhhhHH
Q 010291 234 LKRLEEKIHGRVLNHLLYLMRV-------AEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGSTNPKQQLDGA 306 (513)
Q Consensus 234 ~~~~~~~~~~~~l~~Lv~lL~~-------~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~ 306 (513)
...-..+++.++..+.. .++.+|..|+.+|..++..-.. ..+ ...++.+...+.++++.+|..|+
T Consensus 316 -----~~~~~~l~p~l~~~l~~~d~d~~~~~~~~r~~a~~~L~~l~~~~~~-~~~--~~~~~~l~~~l~~~~~~~r~aal 387 (462)
T 1ibr_B 316 -----KGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCED-DIV--PHVLPFIKEHIKNPDWRYRDAAV 387 (462)
T ss_dssp -----HHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTT-THH--HHHHHHHHHHTTCSSHHHHHHHH
T ss_pred -----HHHhhhccHHHHHHHHhcccccccccchHHHHHHHHHHHHHHhccH-HHH--HHHHHHHHHHhcCCChHHHHHHH
Confidence 00113356666666643 3457899999999998753221 111 24567777888889999999999
Q ss_pred HHHHHhhhc
Q 010291 307 VALFKLANK 315 (513)
Q Consensus 307 ~~L~~l~~~ 315 (513)
.++..++..
T Consensus 388 ~~l~~l~~~ 396 (462)
T 1ibr_B 388 MAFGCILEG 396 (462)
T ss_dssp HHHHHTSSS
T ss_pred HHHHHHhcC
Confidence 999999864
No 90
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=98.78 E-value=5.4e-08 Score=87.78 Aligned_cols=185 Identities=12% Similarity=0.084 Sum_probs=138.8
Q ss_pred hHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhc-CCCHHHHHHHHHHHHHhhcCChhHHHHHH
Q 010291 6 PPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLR-SEDSAIHYEAVGVIGNLVHSSPNIKKEVL 84 (513)
Q Consensus 6 ~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~ 84 (513)
+.+.+.+++.++..|..|+..|..+..+.+.....- -..+++.|...+. +.+..++..|+.+|+.++..-...-.. .
T Consensus 18 ~~l~~~l~s~~w~~R~~a~~~L~~l~~~~~~~~~~~-~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~-~ 95 (242)
T 2qk2_A 18 KDFYDKLEEKKWTLRKESLEVLEKLLTDHPKLENGE-YGALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSN-Y 95 (242)
T ss_dssp TTHHHHHTCSSHHHHHHHHHHHHHHHHHCSSBCCCC-CHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHH-H
T ss_pred HHHHhhhccCCHHHHHHHHHHHHHHHccCCCCCCCC-HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHH-H
Confidence 457888899999999999999999987633321110 1234777888884 899999999999999999532111011 1
Q ss_pred hCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccc-cc
Q 010291 85 AAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMH-NQ 163 (513)
Q Consensus 85 ~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~-~~ 163 (513)
-...++.++..+.+.+..++..+..+|.+++...+- ..+++.+...+++.++.++..++..|..+..... ..
T Consensus 96 ~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~~-------~~ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~ 168 (242)
T 2qk2_A 96 ASACVPSLLEKFKEKKPNVVTALREAIDAIYASTSL-------EAQQESIVESLSNKNPSVKSETALFIARALTRTQPTA 168 (242)
T ss_dssp HHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSCH-------HHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCH-------HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCC
Confidence 123788999999999999999999999999854321 1357788999999999999999999999764432 21
Q ss_pred -hhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhccc
Q 010291 164 -AGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLAD 199 (513)
Q Consensus 164 -~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~ 199 (513)
..-.-...++.|..++.+.++.++..|..+++.++.
T Consensus 169 ~~~~~l~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~ 205 (242)
T 2qk2_A 169 LNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIK 205 (242)
T ss_dssp CCHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Confidence 111113567789999999999999999999999885
No 91
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.78 E-value=1.9e-08 Score=75.63 Aligned_cols=79 Identities=19% Similarity=0.376 Sum_probs=67.5
Q ss_pred EEEEe-cCeeehhhHHHHhhcCHHHHHhccCCCCCCCCCceecCCCCHHHHHHHHHHHhcCc--------------cccC
Q 010291 348 VTFLV-EGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGS--------------VDVT 412 (513)
Q Consensus 348 v~~~~-~~~~~~~h~~il~~~s~~f~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~--------------~~~~ 412 (513)
+.+.. +|..|.+++.+ +..|++++.|+.+++ |.....|+|++++..+++.+++|+|.-. .+++
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd 83 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEIP 83 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccCC
Confidence 55555 78999999997 889999999998766 5556789999999999999999999643 2467
Q ss_pred HHHHHHHHHHHHHhcH
Q 010291 413 LDIAQDLLRAADQYLL 428 (513)
Q Consensus 413 ~~~~~~ll~~A~~~~~ 428 (513)
.+.+.+|+.||+||++
T Consensus 84 ~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 84 TEMSLELLLAADYLSI 99 (99)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 8899999999999974
No 92
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=98.77 E-value=1.5e-07 Score=80.04 Aligned_cols=216 Identities=15% Similarity=0.101 Sum_probs=160.7
Q ss_pred CCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHH
Q 010291 45 NALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVH 124 (513)
Q Consensus 45 g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~ 124 (513)
+.+..+..+|.+.|+.++..++.+|..+...-+.......-...++.++.++.+.+..+.-.|..+|..+..+-|-....
T Consensus 33 ~~l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL~~~~ 112 (265)
T 3b2a_A 33 RALFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVKDVPMGSKT 112 (265)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCHHH
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCCCHHH
Confidence 46788999999999999999999999998764443333333457999999999999999999999999999776654444
Q ss_pred HHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchH
Q 010291 125 IVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNV 204 (513)
Q Consensus 125 ~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~ 204 (513)
+.. .+..+.++++++++-++..++..++.+---...+ +.+..+..++.+.+..++..++.++.+++...+..
T Consensus 113 y~K--l~~aL~dlik~~~~il~~eaae~Lgklkv~~~~~------~V~~~l~sLl~Skd~~vK~agl~~L~eia~~S~D~ 184 (265)
T 3b2a_A 113 FLK--AAKTLVSLLESPDDMMRIETIDVLSKLQPLEDSK------LVRTYINELVVSPDLYTKVAGFCLFLNMLNSSADS 184 (265)
T ss_dssp HHH--HHHHHHHHTTSCCHHHHHHHHHHHHHCCBSCCCH------HHHHHHHHHHTCSSHHHHHHHHHHHHHHGGGCSSC
T ss_pred HHH--HHHHHHHHhcCCCchHHHHHHHHhCcCCcccchH------HHHHHHHHHHhCCChhHHHHHHHHHHHhhcccCCH
Confidence 443 5778999999999999999999999982211122 34557889999999999999999999998744220
Q ss_pred HHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeecC
Q 010291 205 ADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDG 284 (513)
Q Consensus 205 ~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~ 284 (513)
+. -.+++..+-.+|++.|+.++..|+.++-.+...+-. .
T Consensus 185 ------~i-----------------------------~~~I~~eI~elL~~eD~~l~e~aLd~Le~ils~pi~------~ 223 (265)
T 3b2a_A 185 ------GH-----------------------------LTLILDEIPSLLQNDNEFIVELALDVLEKALSFPLL------E 223 (265)
T ss_dssp ------CC-----------------------------GGGTTTTHHHHHTCSCHHHHHHHHHHHHHHTTSCCC------S
T ss_pred ------HH-----------------------------HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCccc------H
Confidence 10 123455566889999999999999999999775432 2
Q ss_pred CchHHHHhhh--------cCCCcchhhhHHHHH
Q 010291 285 GGLELLLGLL--------GSTNPKQQLDGAVAL 309 (513)
Q Consensus 285 ~~i~~L~~ll--------~~~~~~v~~~a~~~L 309 (513)
+.++.+..++ -.+.|.++.+|-...
T Consensus 224 ~~~~~~~~~~~~v~~l~~~~~~~~~~~ka~~v~ 256 (265)
T 3b2a_A 224 NVKIELLKISRIVDGLVYREGAPIIRLKAKKVS 256 (265)
T ss_dssp CCHHHHHHHHHHHHHGGGCSSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHH
Confidence 3333333332 236777777765543
No 93
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.72 E-value=7.9e-09 Score=79.14 Aligned_cols=57 Identities=14% Similarity=0.201 Sum_probs=50.8
Q ss_pred HhcCChhhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHhhCchhhHhhhhhhHHHHH
Q 010291 440 AQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLSTRPGHSNLIQRIIPEIH 496 (513)
Q Consensus 440 ~~~~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~f~~l~~~~~~~l~ 496 (513)
.+.++++||+.++.+|+.|++++|.+.|.+||.+||.++.++++|.+||.+.+.++.
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL 61 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDII 61 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHH
Confidence 456899999999999999999999999999999999999999999999765544443
No 94
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=98.71 E-value=1.9e-07 Score=95.95 Aligned_cols=106 Identities=13% Similarity=0.091 Sum_probs=85.7
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhh--cCCCHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILML--RSEDSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL--~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
+..+..-|+++++.++-.|+++|+++.. ++..+ .+++.+.++| .+.++.||+.|+.++.++...+++...
T Consensus 113 iN~l~kDl~~~n~~ir~lALr~L~~i~~--~e~~~-----~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~p~~~~- 184 (621)
T 2vgl_A 113 NNAIKNDLASRNPTFMGLALHCIANVGS--REMAE-----AFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVP- 184 (621)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHHHHCC--HHHHH-----HHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGGGCC-
T ss_pred HHHHHHhcCCCCHHHHHHHHHHhhccCC--HHHHH-----HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhChhhcC-
Confidence 3455666788999999999999999964 44333 3477888999 889999999999999999976665321
Q ss_pred HHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCch
Q 010291 83 VLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSD 120 (513)
Q Consensus 83 ~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~ 120 (513)
..+.++.+..+|.+.++.++..|+.++..++..++.
T Consensus 185 --~~~~~~~l~~lL~d~d~~V~~~a~~~l~~i~~~~~~ 220 (621)
T 2vgl_A 185 --MGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPE 220 (621)
T ss_dssp --CCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHH
T ss_pred --chhHHHHHHHHhCCCCccHHHHHHHHHHHHHHhChH
Confidence 247899999999999999999999999999866554
No 95
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.71 E-value=1.6e-08 Score=75.50 Aligned_cols=80 Identities=21% Similarity=0.356 Sum_probs=62.7
Q ss_pred EEEEe-cCeeehhhHHHHhhcCHHHHHhccC--CCCCCCCCceecCCCCHHHHHHHHHHHhcCc-----------cccCH
Q 010291 348 VTFLV-EGRRFYAHRICLLASSDAFRAMFDG--GYREKDARDIEIPNIRWEVFELMMRFIYTGS-----------VDVTL 413 (513)
Q Consensus 348 v~~~~-~~~~~~~h~~il~~~s~~f~~~~~~--~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~-----------~~~~~ 413 (513)
+.+.. +|..|.+++.+ +..|++++.|+.+ .+.|+....|+|++++..+++.+++|+|.-. .+++.
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~ 81 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 81 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCT
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccCH
Confidence 44454 78999999997 8899999999975 3467667799999999999999999999643 24677
Q ss_pred HHHHHHHHHHHHhcH
Q 010291 414 DIAQDLLRAADQYLL 428 (513)
Q Consensus 414 ~~~~~ll~~A~~~~~ 428 (513)
+.+.+|+.||+||++
T Consensus 82 ~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 82 EIALELLMAANFLDC 96 (96)
T ss_dssp TTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCc
Confidence 899999999999874
No 96
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=98.70 E-value=2.3e-07 Score=87.00 Aligned_cols=272 Identities=9% Similarity=0.028 Sum_probs=127.8
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHH
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVL 84 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~ 84 (513)
...++.++++++...+.-.--.+..++...++. + =++..+.+=+.++++.+|-.|+++|+++... +.-+.
T Consensus 70 f~~v~kl~~s~d~~lKrLvYLyl~~~~~~~~e~---i---Lv~Nsl~kDl~~~N~~iR~lALRtL~~I~~~--~m~~~-- 139 (355)
T 3tjz_B 70 FFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDV---I---IVTSSLTKDMTGKEDSYRGPAVRALCQITDS--TMLQA-- 139 (355)
T ss_dssp HHHHHGGGGCCCHHHHHHHHHHHHHHTTTSSCG---G---GGHHHHHHHHHSSCHHHHHHHHHHHHHHCCT--TTHHH--
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHhCCCHHHH---H---HHHHHHHhhcCCCcHhHHHHHHHHHhcCCCH--HHHHH--
Confidence 345677888888888888888888877642221 1 2456777777888888888888888888643 22222
Q ss_pred hCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhcccc-c
Q 010291 85 AAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHN-Q 163 (513)
Q Consensus 85 ~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~-~ 163 (513)
..+.+.+.+.+.++.++..|+.+...+....|+.. .++++.+-+++.+.++-++.+|..+|..+...+.. -
T Consensus 140 ---l~~~lk~~L~d~~pyVRk~A~l~~~kL~~~~pe~v-----~~~~~~l~~ll~d~n~~V~~~Al~lL~ei~~~d~~a~ 211 (355)
T 3tjz_B 140 ---IERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVV-----KRWVNEAQEAASSDNIMVQYHALGLLYHVRKNDRLAV 211 (355)
T ss_dssp ---HHHHHHHHHTCSSHHHHHHHHHHHHHHTTTCHHHH-----HTTHHHHHHHTTCSSHHHHHHHHHHHHHHHTTCHHHH
T ss_pred ---HHHHHHHHcCCCCHHHHHHHHHHHHHHhccCHHHH-----HHHHHHHHHHhcCCCccHHHHHHHHHHHHHhhchHHH
Confidence 45667888888888888888888888876666532 26788888888888888888888888888764321 1
Q ss_pred hhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCc--chHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHH--
Q 010291 164 AGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNE--DNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEE-- 239 (513)
Q Consensus 164 ~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~--~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~-- 239 (513)
..++ +.+.+. .-.++..+...+..+..++..+ .....+.+ .+....+. ......-++.+.+-.
T Consensus 212 ~kLv-----~~l~~~-~l~~~~~q~~llr~l~~~~~~d~~~~~~~~~~--~l~~~L~~-----~~~aVvyEa~k~I~~l~ 278 (355)
T 3tjz_B 212 SKMI-----SKFTRH-GLKSPFAYCMMIRVASRQLEDEDGSRDSPLFD--FIESCLRN-----KHEMVVYEAASAIVNLP 278 (355)
T ss_dssp HHHH-----HHHHSS-CCSCHHHHHHHHHHHTCC-------------------CCCCC-----SSHHHHHHHHHHHTC--
T ss_pred HHHH-----HHHhcC-CCcChHHHHHHHHHHHHhccccchhhHHHHHH--HHHHHHcC-----CChHHHHHHHHHHHhcc
Confidence 1111 111110 0112222233333333333221 11111110 00000000 000000000000000
Q ss_pred ----HhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcCCCcchhhhHHHHHHH
Q 010291 240 ----KIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGSTNPKQQLDGAVALFK 311 (513)
Q Consensus 240 ----~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~ 311 (513)
..-..++..|..+|.++++.+|..|++.|..+....+.. + ...-..+.+++.+++..+...|...|.+
T Consensus 279 ~~~~~~~~~a~~~L~~fLss~d~niryvaLr~L~~l~~~~P~~--v--~~~n~~ie~li~d~n~sI~t~Aittllk 350 (355)
T 3tjz_B 279 GCSAKELAPAVSVLQLFCSSPKAALRYAAVRTLNKVAMKHPSA--V--TACNLDLENLVTDANRSIATLAITTLLK 350 (355)
T ss_dssp ---------CCCTHHHHHHSSSSSSHHHHHHCC-------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHCcHH--H--HHHHHHHHHHccCCcHhHHHHHHHHhhh
Confidence 001123455667788889999999999988887643321 1 1244567788888888887777666554
No 97
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=98.69 E-value=6.7e-07 Score=83.82 Aligned_cols=266 Identities=13% Similarity=0.086 Sum_probs=167.1
Q ss_pred HHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcC
Q 010291 19 VQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSS 98 (513)
Q Consensus 19 ~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~ 98 (513)
.+..-.+.|.-+..|.+-.+..+.. +...++.++.+++..+++-.--.+.+++...++. + =++..+.+=+.+
T Consensus 44 c~~~l~kll~l~~~G~~f~~~e~t~--lf~~v~kl~~s~d~~lKrLvYLyl~~~~~~~~e~---i---Lv~Nsl~kDl~~ 115 (355)
T 3tjz_B 44 CAHILTKILYLINQGEHLGTTEATE--AFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDV---I---IVTSSLTKDMTG 115 (355)
T ss_dssp HHHHHHHHHHHHHHTCCCCHHHHHH--HHHHHHGGGGCCCHHHHHHHHHHHHHHTTTSSCG---G---GGHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHCCCCCchhHHHH--HHHHHHHHhcCCCHHHHHHHHHHHHHhCCCHHHH---H---HHHHHHHhhcCC
Confidence 3444455555555555543333321 2456788999999999999999999988764442 1 257778888889
Q ss_pred CChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHH
Q 010291 99 CCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKL 178 (513)
Q Consensus 99 ~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~l 178 (513)
+++-++-.|+++|+++.. ++-.+ ...+.+-+.+.+.++.++..|+.+...|....+. ++ .+.+..+.++
T Consensus 116 ~N~~iR~lALRtL~~I~~--~~m~~-----~l~~~lk~~L~d~~pyVRk~A~l~~~kL~~~~pe---~v-~~~~~~l~~l 184 (355)
T 3tjz_B 116 KEDSYRGPAVRALCQITD--STMLQ-----AIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFD---VV-KRWVNEAQEA 184 (355)
T ss_dssp SCHHHHHHHHHHHHHHCC--TTTHH-----HHHHHHHHHHTCSSHHHHHHHHHHHHHHTTTCHH---HH-HTTHHHHHHH
T ss_pred CcHhHHHHHHHHHhcCCC--HHHHH-----HHHHHHHHHcCCCCHHHHHHHHHHHHHHhccCHH---HH-HHHHHHHHHH
Confidence 999999999999999963 33222 2466799999999999999999999999865544 22 2688899999
Q ss_pred hcCCCHHHHHHHHHHHHhcccCcc-hHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHH-------HHhhhhhHHHHH
Q 010291 179 LDSKNGSLQHNAAFALYGLADNED-NVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLE-------EKIHGRVLNHLL 250 (513)
Q Consensus 179 l~~~~~~~~~~a~~~L~~l~~~~~-~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~Lv 250 (513)
+.+.++.++.+|+.++..++.++. ....++. .+.+.... .....|. -++.+. .-.....++.+.
T Consensus 185 l~d~n~~V~~~Al~lL~ei~~~d~~a~~kLv~-----~l~~~~l~-~~~~q~~--llr~l~~~~~~d~~~~~~~~~~~l~ 256 (355)
T 3tjz_B 185 ASSDNIMVQYHALGLLYHVRKNDRLAVSKMIS-----KFTRHGLK-SPFAYCM--MIRVASRQLEDEDGSRDSPLFDFIE 256 (355)
T ss_dssp TTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHH-----HHHSSCCS-CHHHHHH--HHHHHTCC-----------------
T ss_pred hcCCCccHHHHHHHHHHHHHhhchHHHHHHHH-----HHhcCCCc-ChHHHHH--HHHHHHHhccccchhhHHHHHHHHH
Confidence 999999999999999999987543 2222221 11000000 0000000 011000 111234666777
Q ss_pred HHHHHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcCCCcchhhhHHHHHHHhhhc
Q 010291 251 YLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGSTNPKQQLDGAVALFKLANK 315 (513)
Q Consensus 251 ~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~ 315 (513)
.+|++.++.|...|++++..+...+.. .+ ..++..|..++.++++++|..|...|..+...
T Consensus 257 ~~L~~~~~aVvyEa~k~I~~l~~~~~~--~~--~~a~~~L~~fLss~d~niryvaLr~L~~l~~~ 317 (355)
T 3tjz_B 257 SCLRNKHEMVVYEAASAIVNLPGCSAK--EL--APAVSVLQLFCSSPKAALRYAAVRTLNKVAMK 317 (355)
T ss_dssp CCCCCSSHHHHHHHHHHHTC---------------CCCTHHHHHHSSSSSSHHHHHHCC------
T ss_pred HHHcCCChHHHHHHHHHHHhccCCCHH--HH--HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHH
Confidence 778888899999999999998552221 11 34577888889999999999998888777764
No 98
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=98.66 E-value=8.8e-06 Score=66.31 Aligned_cols=181 Identities=19% Similarity=0.217 Sum_probs=138.6
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhc-CCCHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLR-SEDSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~-~~~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
.+..++++|.++-+.+|.+|+..+..++..-++....+ +..|+-+++ ++.-..-....++++.++.-+|+..+.
T Consensus 33 ~l~~lI~~LDDDlwtV~kNAl~vi~~i~~~~~el~epl-----~~kL~vm~~ksEaIpltqeIa~a~G~la~i~Pe~v~~ 107 (253)
T 2db0_A 33 VLKKLIELLDDDLWTVVKNAISIIMVIAKTREDLYEPM-----LKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKPELVKS 107 (253)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCGGGHHHH-----HHHHHHHHHHCCSHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHhHHHHHHHHHHHhHHHHHHH-----HHHHHHHHhhcccCchHHHHHHHHhHHHHhCHHHHHh
Confidence 35678888988889999999999999998777765554 456677766 566667677889999999887775333
Q ss_pred HHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhcccc
Q 010291 83 VLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHN 162 (513)
Q Consensus 83 ~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~ 162 (513)
.+|.+..=..-.++.++-+...+|..++..+|.... ++...+..++.++|..-+..|+..+..+.. +
T Consensus 108 -----vVp~lfanyrigd~kikIn~~yaLeeIaranP~l~~-----~v~rdi~smltskd~~Dkl~aLnFi~alGe---n 174 (253)
T 2db0_A 108 -----MIPVLFANYRIGDEKTKINVSYALEEIAKANPMLMA-----SIVRDFMSMLSSKNREDKLTALNFIEAMGE---N 174 (253)
T ss_dssp -----HHHHHHHHSCCCSHHHHHHHHHHHHHHHHHCHHHHH-----HHHHHHHHHTSCSSHHHHHHHHHHHHTCCT---T
T ss_pred -----hHHHHHHHHhcCCccceecHHHHHHHHHHhChHHHH-----HHHHHHHHHhcCCChHHHHHHHHHHHHHhc---c
Confidence 356666666678999999999999999988877544 345678999999987666666666666543 3
Q ss_pred chhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcch
Q 010291 163 QAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDN 203 (513)
Q Consensus 163 ~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~ 203 (513)
+...+ ...++.|..+|.++|.-++..+..+|.+++.-.+.
T Consensus 175 ~~~yv-~PfLprL~aLL~D~deiVRaSaVEtL~~lA~~npk 214 (253)
T 2db0_A 175 SFKYV-NPFLPRIINLLHDGDEIVRASAVEALVHLATLNDK 214 (253)
T ss_dssp THHHH-GGGHHHHHGGGGCSSHHHHHHHHHHHHHHHTSCHH
T ss_pred Ccccc-CcchHHHHHHHcCcchhhhHHHHHHHHHHHHcCHH
Confidence 33222 35688899999999999999999999999984433
No 99
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.65 E-value=1.5e-07 Score=78.46 Aligned_cols=109 Identities=17% Similarity=0.259 Sum_probs=81.6
Q ss_pred cEEEEe-cCeeehhhHHHHhhcCHHHHHhccCCCC----CCCCCceecCCCCHHHHHHHHHHHhcCc-------------
Q 010291 347 DVTFLV-EGRRFYAHRICLLASSDAFRAMFDGGYR----EKDARDIEIPNIRWEVFELMMRFIYTGS------------- 408 (513)
Q Consensus 347 Dv~~~~-~~~~~~~h~~il~~~s~~f~~~~~~~~~----e~~~~~i~l~~~~~~~~~~~l~~~Y~~~------------- 408 (513)
.+.+.. +|..|.+++.+ +..|++++.|+...-. +.....|+|++++..+++.+++|+|...
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 355554 67899999998 6789999999975322 2334789999999999999999998743
Q ss_pred ------------cccCHHHHHHHHHHHHHhcHHHHHHHHHHHHHhc---CChhhHHHHHHHHH
Q 010291 409 ------------VDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQD---ISLENVSSMYELSE 456 (513)
Q Consensus 409 ------------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~---~~~~n~~~~~~~a~ 456 (513)
+.++.+.+.+|+.||+||++.+|...|.+++... -+++....++.+..
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~n 149 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVN 149 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCC
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCC
Confidence 2356688999999999999999999999988554 45555555544433
No 100
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=98.63 E-value=3.1e-09 Score=85.84 Aligned_cols=120 Identities=23% Similarity=0.222 Sum_probs=93.9
Q ss_pred CChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 3 GGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 3 g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
..++.++.+|+++++.+|..|++.|+.+... .++.|+.+|+++++.+|..|+++|+++.. +
T Consensus 12 ~~~~~l~~~L~~~~~~vR~~A~~~L~~~~~~------------~~~~L~~~L~d~~~~vR~~A~~aL~~~~~--~----- 72 (131)
T 1te4_A 12 SGLVPRGSHMADENKWVRRDVSTALSRMGDE------------AFEPLLESLSNEDWRIRGAAAWIIGNFQD--E----- 72 (131)
T ss_dssp ---------CCSSCCCSSSSCCSSTTSCSST------------THHHHHHGGGCSCHHHHHHHHHHHGGGCS--H-----
T ss_pred ccHHHHHHHhcCCCHHHHHHHHHHHHHhCch------------HHHHHHHHHcCCCHHHHHHHHHHHHhcCC--H-----
Confidence 3567888999999999999999998876531 26899999999999999999999999852 1
Q ss_pred HHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHH
Q 010291 83 VLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRL 156 (513)
Q Consensus 83 ~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l 156 (513)
..++.|+.+++++++.++..|+++|.++. ++ ..++.|+..++++++.++..|+++|.++
T Consensus 73 ----~a~~~L~~~L~d~~~~VR~~A~~aL~~~~--~~---------~a~~~L~~~l~d~~~~vr~~A~~aL~~i 131 (131)
T 1te4_A 73 ----RAVEPLIKLLEDDSGFVRSGAARSLEQIG--GE---------RVRAAMEKLAETGTGFARKVAVNYLETH 131 (131)
T ss_dssp ----HHHHHHHHHHHHCCTHHHHHHHHHHHHHC--SH---------HHHHHHHHHTTSCCTHHHHHHHHHGGGC
T ss_pred ----HHHHHHHHHHcCCCHHHHHHHHHHHHHhC--cH---------HHHHHHHHHHhCCCHHHHHHHHHHHHhC
Confidence 24788999999999999999999999985 11 3578899999999999999999988653
No 101
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=98.62 E-value=7.9e-08 Score=86.68 Aligned_cols=187 Identities=14% Similarity=0.090 Sum_probs=139.4
Q ss_pred hHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhC-CCCHHHHHHHHHHHHHHhhccccchhhH
Q 010291 89 LQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQ-SPDVQLREMSAFALGRLAQDMHNQAGIA 167 (513)
Q Consensus 89 i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~ 167 (513)
.+.+.+.+.+.++..|..|+..|..+..+.+.....- -..+++.|...+. +++..++..|+.++..++..-...-.-.
T Consensus 17 ~~~l~~~l~s~~w~~R~~a~~~L~~l~~~~~~~~~~~-~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~~ 95 (242)
T 2qk2_A 17 PKDFYDKLEEKKWTLRKESLEVLEKLLTDHPKLENGE-YGALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNY 95 (242)
T ss_dssp CTTHHHHHTCSSHHHHHHHHHHHHHHHHHCSSBCCCC-CHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHHH
T ss_pred CHHHHhhhccCCHHHHHHHHHHHHHHHccCCCCCCCC-HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 3457788888999999999999999986633211100 1235777888884 8999999999999999995432211112
Q ss_pred hcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHH
Q 010291 168 HNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLN 247 (513)
Q Consensus 168 ~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 247 (513)
-...++.++..+.+++..++..+..+|..++..... ..+++
T Consensus 96 ~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~~---------------------------------------~~ll~ 136 (242)
T 2qk2_A 96 ASACVPSLLEKFKEKKPNVVTALREAIDAIYASTSL---------------------------------------EAQQE 136 (242)
T ss_dssp HHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSCH---------------------------------------HHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCH---------------------------------------HHHHH
Confidence 234678899999999999999999999988764321 13577
Q ss_pred HHHHHHHHhhcchhhhHHHHHhhccCC--CCc--ceeeecCCchHHHHhhhcCCCcchhhhHHHHHHHhhhccc
Q 010291 248 HLLYLMRVAEKGVQRRVALALAHLCSP--DDQ--RTIFIDGGGLELLLGLLGSTNPKQQLDGAVALFKLANKAT 317 (513)
Q Consensus 248 ~Lv~lL~~~~~~v~~~a~~aL~~l~~~--~~~--~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 317 (513)
.+...+++.++.+|..++..|+.+... ++. ...+ ...++.|..++.++++++|..|..++..++....
T Consensus 137 ~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~~~~l--~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~~vg 208 (242)
T 2qk2_A 137 SIVESLSNKNPSVKSETALFIARALTRTQPTALNKKLL--KLLTTSLVKTLNEPDPTVRDSSAEALGTLIKLMG 208 (242)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCCHHHH--HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCccHHHH--HHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHcC
Confidence 888889989999999999999996433 221 1122 2578999999999999999999999999886544
No 102
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=98.60 E-value=1.1e-06 Score=84.15 Aligned_cols=290 Identities=12% Similarity=0.141 Sum_probs=183.8
Q ss_pred CCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHH--HHHHhhcC-CCHHHHHHHHHHHHHhhcCChhHHHHHHhCC--Ch
Q 010291 15 TDTKVQRAAAGALRTLAFKNDENKNQIVECNALP--TLILMLRS-EDSAIHYEAVGVIGNLVHSSPNIKKEVLAAG--AL 89 (513)
Q Consensus 15 ~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~--~Lv~lL~~-~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g--~i 89 (513)
+++-.+..|+.++..++..+....... .+.+. .++..|.. ++...+..++.+|..+... +..|..+.+.+ .+
T Consensus 137 dd~~~ll~a~~l~~ll~~~~~~~~~~l--~~l~~~~~~~~~L~~~~~~~~~~i~v~~L~~Ll~~-~~~R~~f~~~~~~~~ 213 (480)
T 1ho8_A 137 DFQTVLISGFNVVSLLVQNGLHNVKLV--EKLLKNNNLINILQNIEQMDTCYVCIRLLQELAVI-PEYRDVIWLHEKKFM 213 (480)
T ss_dssp SHHHHHHHHHHHHHHHTSTTTCCHHHH--HHHHHCHHHHHHHHCTTCHHHHHHHHHHHHHHHTS-HHHHHHHHTTHHHHH
T ss_pred cchHHHHHHHHHHHHHhccCCccHhHH--HHHhhhHHHHHHhccccCCchHHHHHHHHHHHhcc-hhHHHHHHHcccchh
Confidence 334455666666565553222211111 01112 34455554 3455677889999999876 77788887654 35
Q ss_pred HHHHHhhcC---------------C--ChHHHHHHHHHHHHhhcCCchhhHHHHhcCCh--HHHHHHhCC-CCHHHHHHH
Q 010291 90 QPVIGLLSS---------------C--CSESQREAALLLGQFAATDSDCKVHIVQRGAV--RPLIEMLQS-PDVQLREMS 149 (513)
Q Consensus 90 ~~L~~ll~~---------------~--~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i--~~L~~~l~~-~~~~~~~~a 149 (513)
+.++.++.. + ...+++.++.+++-++.. ++....+...+.. +.|+.+++. ..+++.+.+
T Consensus 214 ~~l~~il~~~~~~~~~~~~~~~~~~~~~~Ql~Y~~ll~iWlLSF~-~~~~~~l~~~~i~~~~~L~~i~k~s~KEKvvRv~ 292 (480)
T 1ho8_A 214 PTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTFN-PVFANELVQKYLSDFLDLLKLVKITIKEKVSRLC 292 (480)
T ss_dssp HHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHTTS-HHHHHHHHTTSHHHHHHHHHHHHHCCSHHHHHHH
T ss_pred HHHHHHHHHhhccccccccccccCCCccHHHHHHHHHHHHHHHcC-HHHHHHHHhcchHHHHHHHHHHHhhccchhHHHH
Confidence 555543331 1 356789999999999754 4455556655533 566666765 578999999
Q ss_pred HHHHHHHhhccc-cc----h-hhHhcCChHHHHHHhcCC---CHHHHHHH-------HHHHHhcccCcchHHHHHhhcCc
Q 010291 150 AFALGRLAQDMH-NQ----A-GIAHNGGLVPLLKLLDSK---NGSLQHNA-------AFALYGLADNEDNVADFIRVGGV 213 (513)
Q Consensus 150 ~~~L~~l~~~~~-~~----~-~~~~~~~i~~L~~ll~~~---~~~~~~~a-------~~~L~~l~~~~~~~~~~~~~g~i 213 (513)
+.+|.|+..... .. . .+...++ .++++.|... |+++.+.. -..+..++.-++...++. .|.+
T Consensus 293 la~l~Nll~~~~~~~~~~~~~~~~~~~~-l~~l~~L~~rk~~Dedl~edl~~L~e~L~~~~~~ltsfDeY~~El~-sG~L 370 (480)
T 1ho8_A 293 ISIILQCCSTRVKQHKKVIKQLLLLGNA-LPTVQSLSERKYSDEELRQDISNLKEILENEYQELTSFDEYVAELD-SKLL 370 (480)
T ss_dssp HHHHHHTTSSSSTTHHHHHHHHHHHHCH-HHHHHHHHSSCCSSHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHH-HTCC
T ss_pred HHHHHHHhcccchhhhhHHHHHHHHccc-hHHHHHHhhCCCCcHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHh-cCCc
Confidence 999999997542 11 1 1222334 4555555543 44443322 223334444444444443 3433
Q ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHH----------hhcchhhhHHHHHhhccCC-CCcceeee
Q 010291 214 QKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRV----------AEKGVQRRVALALAHLCSP-DDQRTIFI 282 (513)
Q Consensus 214 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~----------~~~~v~~~a~~aL~~l~~~-~~~~~~l~ 282 (513)
.- ...+.....|..+..++.. .+..++..|+.+|.+ .++.+..-||.=|+.+++. |.++..+-
T Consensus 371 ~W-----SP~H~se~FW~ENa~kf~e-~~~~llk~L~~iL~~~~~~~~~~~s~d~~~laVAc~Digefvr~~P~gr~i~~ 444 (480)
T 1ho8_A 371 CW-----SPPHVDNGFWSDNIDEFKK-DNYKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLD 444 (480)
T ss_dssp CC-----CGGGGCHHHHHHHSGGGSS-GGGHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHHHH
T ss_pred cc-----CCCccchhHHHHHHHHHHh-cchHHHHHHHHHHhhhccccccccCCCcceEEeecccHHHHHHHCcchhHHHH
Confidence 21 1233444667777766654 566789999999984 4678888899999999874 66888888
Q ss_pred cCCchHHHHhhhcCCCcchhhhHHHHHHHhhhcc
Q 010291 283 DGGGLELLLGLLGSTNPKQQLDGAVALFKLANKA 316 (513)
Q Consensus 283 ~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~ 316 (513)
+.|+-..++++|.+++++||.+|..++..+..+.
T Consensus 445 ~lg~K~~VM~Lm~h~d~~Vr~~AL~avQklm~~~ 478 (480)
T 1ho8_A 445 KTGGKADIMELLNHSDSRVKYEALKATQAIIGYT 478 (480)
T ss_dssp HHSHHHHHHHHTSCSSHHHHHHHHHHHHHHHHHS
T ss_pred HcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHHhc
Confidence 8899999999999999999999999999887654
No 103
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=98.58 E-value=1.7e-07 Score=84.38 Aligned_cols=191 Identities=7% Similarity=0.011 Sum_probs=138.0
Q ss_pred HHHHhhccCCHHHHHHHHHHHHH-hhccCchhHHHHHh-cCCHHHHHHhh-cCCCHHHHHHHHHHHHHhhcCCh--hHH-
Q 010291 7 PLVELLEFTDTKVQRAAAGALRT-LAFKNDENKNQIVE-CNALPTLILML-RSEDSAIHYEAVGVIGNLVHSSP--NIK- 80 (513)
Q Consensus 7 ~Lv~lL~~~~~~~~~~a~~~L~~-l~~~~~~~~~~i~~-~g~i~~Lv~lL-~~~~~~v~~~a~~~L~~l~~~~~--~~~- 80 (513)
.+-+.+++.++..|..|+..|.. ++.+.++....-.+ ..++..|...+ ++.+..++..|+.+|+.++.+-. ...
T Consensus 20 ~f~~~l~s~~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~ 99 (249)
T 2qk1_A 20 DFQERITSSKWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSK 99 (249)
T ss_dssp THHHHHTCSSHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCH
T ss_pred hHHHHhhcCCHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccH
Confidence 35567789999999999999999 88654432210001 13467788888 68899999999999999985321 111
Q ss_pred HHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhcc
Q 010291 81 KEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDM 160 (513)
Q Consensus 81 ~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~ 160 (513)
.. ....++.++..+.+....++..+..+|..++...++......-..+++.|+..++++++.+++.++.+|..+....
T Consensus 100 ~y--~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~ 177 (249)
T 2qk1_A 100 DY--VSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEE 177 (249)
T ss_dssp HH--HHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHC
T ss_pred HH--HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccccccCCcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHc
Confidence 11 1226888899998888999999999999988543211100001135778889999999999999999999998654
Q ss_pred ccc-hhh--Hh-cCChHHHHHHhcCCCHHHHHHHHHHHHhccc
Q 010291 161 HNQ-AGI--AH-NGGLVPLLKLLDSKNGSLQHNAAFALYGLAD 199 (513)
Q Consensus 161 ~~~-~~~--~~-~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~ 199 (513)
... ..+ .- ...++.|.+++.+.+..++..|..+++.++.
T Consensus 178 ~~~~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~i~~ 220 (249)
T 2qk1_A 178 KDGYSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFAILIK 220 (249)
T ss_dssp CSCSHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 431 221 12 4678889999999999999999999998875
No 104
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=98.57 E-value=2.4e-06 Score=69.54 Aligned_cols=216 Identities=18% Similarity=0.175 Sum_probs=164.0
Q ss_pred HhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhc-CCChHHHHHHHHHHHHhhcCCch
Q 010291 42 VECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLS-SCCSESQREAALLLGQFAATDSD 120 (513)
Q Consensus 42 ~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~-~~~~~~~~~a~~~L~~l~~~~~~ 120 (513)
.+..+++.++.+|.+.-..++.+|+..+..++..-++..+-+ +..|+-+++ +....+....+.+++.++...|+
T Consensus 29 ~d~~~l~~lI~~LDDDlwtV~kNAl~vi~~i~~~~~el~epl-----~~kL~vm~~ksEaIpltqeIa~a~G~la~i~Pe 103 (253)
T 2db0_A 29 YDESVLKKLIELLDDDLWTVVKNAISIIMVIAKTREDLYEPM-----LKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKPE 103 (253)
T ss_dssp HCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCGGGHHHH-----HHHHHHHHHHCCSHHHHHHHHHHHHHHHHHCHH
T ss_pred hhHHHHHHHHHHhccHHHHHHHhHHHHHHHHHHHhHHHHHHH-----HHHHHHHHhhcccCchHHHHHHHHhHHHHhCHH
Confidence 345678899999998888999999999999998877765443 334555544 55667778889999999977776
Q ss_pred hhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccC
Q 010291 121 CKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADN 200 (513)
Q Consensus 121 ~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~ 200 (513)
... +.+|.+..-..-++++.+.+...+|..++..++.-. .+.+..+..++.++|..-+..|+..+..+..+
T Consensus 104 ~v~-----~vVp~lfanyrigd~kikIn~~yaLeeIaranP~l~----~~v~rdi~smltskd~~Dkl~aLnFi~alGen 174 (253)
T 2db0_A 104 LVK-----SMIPVLFANYRIGDEKTKINVSYALEEIAKANPMLM----ASIVRDFMSMLSSKNREDKLTALNFIEAMGEN 174 (253)
T ss_dssp HHH-----HHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHCHHHH----HHHHHHHHHHTSCSSHHHHHHHHHHHHTCCTT
T ss_pred HHH-----hhHHHHHHHHhcCCccceecHHHHHHHHHHhChHHH----HHHHHHHHHHhcCCChHHHHHHHHHHHHHhcc
Confidence 544 356777777788899999999999999986544321 13455688999999987788888888887754
Q ss_pred cchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCC-cce
Q 010291 201 EDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDD-QRT 279 (513)
Q Consensus 201 ~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~-~~~ 279 (513)
... +-.-++|.|..+|.+.+.-||..|..+|.+++.-.+ .|.
T Consensus 175 ~~~-------------------------------------yv~PfLprL~aLL~D~deiVRaSaVEtL~~lA~~npklRk 217 (253)
T 2db0_A 175 SFK-------------------------------------YVNPFLPRIINLLHDGDEIVRASAVEALVHLATLNDKLRK 217 (253)
T ss_dssp THH-------------------------------------HHGGGHHHHHGGGGCSSHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred Ccc-------------------------------------ccCcchHHHHHHHcCcchhhhHHHHHHHHHHHHcCHHHHH
Confidence 321 123479999999999999999999999999987543 332
Q ss_pred eeecCCchHHHHhhhcCCCcchhhhHHHHHHHhhh
Q 010291 280 IFIDGGGLELLLGLLGSTNPKQQLDGAVALFKLAN 314 (513)
Q Consensus 280 ~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~ 314 (513)
.+..-++-+.+.+..++...-.+|..+.-
T Consensus 218 ------ii~~kl~e~~D~S~lv~~~V~egL~rl~l 246 (253)
T 2db0_A 218 ------VVIKRLEELNDTSSLVNKTVKEGISRLLL 246 (253)
T ss_dssp ------HHHHHHHHCCCSCHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 34445566677888888888888887753
No 105
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=98.55 E-value=2.3e-06 Score=95.88 Aligned_cols=276 Identities=14% Similarity=0.097 Sum_probs=179.0
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhccCc----------------hhHHHH--HhcCCHHHHHHhhcCCCHHHHHHH
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAFKND----------------ENKNQI--VECNALPTLILMLRSEDSAIHYEA 65 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~----------------~~~~~i--~~~g~i~~Lv~lL~~~~~~v~~~a 65 (513)
.++.++..+++.++.+|..++.++..+..... .....+ .-..+++.+.+.++++++.+|..+
T Consensus 375 l~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~l~~~~~~vr~~~ 454 (1230)
T 1u6g_C 375 VSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKTRQCC 454 (1230)
T ss_dssp THHHHHSTTSCSSSHHHHHHHHHHHHHHHHHCCC------------CCCHHHHHHHHTTHHHHHHHHHTTCSCHHHHHHH
T ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHhccccccccCccccccccchHHHHHHHhhHHHHHHHHHhccCCHHHHHHH
Confidence 46667777777889999999998887764210 001111 112356666777888999999999
Q ss_pred HHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCCh--HHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCH
Q 010291 66 VGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCS--ESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDV 143 (513)
Q Consensus 66 ~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~--~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~ 143 (513)
+.+|+.++...+..... .-...++.+...+.+..+ +++..++..+..+..........-.-..+++.++..+.+++.
T Consensus 455 ~~~L~~l~~~~~~~l~~-~l~~ll~~l~~~L~d~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~l~~llp~L~~~l~d~~~ 533 (1230)
T 1u6g_C 455 FNMLTELVNVLPGALTQ-HIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVGDPFY 533 (1230)
T ss_dssp HHHHHHHHHHSTTTTGG-GHHHHHHHHHHHTTCSSSCHHHHHHHHHHHHHHHHSSCGGGGHHHHTTTHHHHHHHHTCSSH
T ss_pred HHHHHHHHHHchhhhHH-HHHHHHHHHHHHHcCCCCcchHHHHHHHHHHHHHHhCCHHHHHhHHHHHHHHHHHHHcccch
Confidence 99999998653321100 012356778888887654 899999999998874322221112234789999999999998
Q ss_pred HHHHHHHHHHHHHhhcccc-------chhhHhcCChHHHHHHh--cCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcc
Q 010291 144 QLREMSAFALGRLAQDMHN-------QAGIAHNGGLVPLLKLL--DSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQ 214 (513)
Q Consensus 144 ~~~~~a~~~L~~l~~~~~~-------~~~~~~~~~i~~L~~ll--~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~ 214 (513)
.++..++.++..++..-.. .-.-.-...++.++..+ .+.+..++..++.+++.++...... +
T Consensus 534 ~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~~d~~~~vr~~a~~~lg~L~~~~g~~--~------- 604 (1230)
T 1u6g_C 534 KITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDN--L------- 604 (1230)
T ss_dssp HHHHHHHHHHHHHHHHHCCSSSCCCCCCHHHHHHHHHHHHHHHSCSSSCHHHHHHHHHHHHHHHHHTGGG--C-------
T ss_pred HHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhCch--h-------
Confidence 8988899999988843211 10111124566677777 5567889999999999987632110 0
Q ss_pred cccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHH--hhcchhhhHHHHHhhccCCCCc-ceeeecCCchHHHH
Q 010291 215 KLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRV--AEKGVQRRVALALAHLCSPDDQ-RTIFIDGGGLELLL 291 (513)
Q Consensus 215 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~--~~~~v~~~a~~aL~~l~~~~~~-~~~l~~~~~i~~L~ 291 (513)
...++.++..|.. .+...|..++.+++.++..... ...-.-...++.|.
T Consensus 605 ----------------------------~~~~~~~l~~L~~~l~~e~~r~~~~~al~~i~~~~~~~~~~~~~~~i~~~L~ 656 (1230)
T 1u6g_C 605 ----------------------------GSDLPNTLQIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILA 656 (1230)
T ss_dssp ----------------------------CTHHHHHHHHHHHHTTSSSHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHH
T ss_pred ----------------------------hhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhCccccchHHHHHHHHHHHH
Confidence 0122333333332 3445678889999988753211 00111234577888
Q ss_pred hhhcCCCcchhhhHHHHHHHhhhccc
Q 010291 292 GLLGSTNPKQQLDGAVALFKLANKAT 317 (513)
Q Consensus 292 ~ll~~~~~~v~~~a~~~L~~l~~~~~ 317 (513)
..+.+.+..+|..++.++..++....
T Consensus 657 ~~l~~~~~~~r~~a~~al~~l~~~~~ 682 (1230)
T 1u6g_C 657 SFLRKNQRALKLGTLSALDILIKNYS 682 (1230)
T ss_dssp HHTTSCCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhCCHHHHHHHHHHHHHHHhccc
Confidence 88888899999999999999987653
No 106
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=98.55 E-value=2.4e-06 Score=89.23 Aligned_cols=235 Identities=15% Similarity=0.117 Sum_probs=162.9
Q ss_pred hhHHHHhhccCC--------HHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCC
Q 010291 5 IPPLVELLEFTD--------TKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSS 76 (513)
Q Consensus 5 i~~Lv~lL~~~~--------~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~ 76 (513)
+..|.+.|.+++ +.++..|+..|+.+..|+.. ..+++.|.++|.+.+..++..|+.+|+.+-.++
T Consensus 431 ~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLGla~~GS~~-------eev~e~L~~~L~dd~~~~~~~AalALGli~vGT 503 (963)
T 4ady_A 431 TDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSAN-------IEVYEALKEVLYNDSATSGEAAALGMGLCMLGT 503 (963)
T ss_dssp HHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHSTTCCC-------HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCccccccccccHHHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccc
Confidence 445566665544 67888899999987654321 125677888888777888888999999874443
Q ss_pred hhHHHHHHhCCChHHHHHhh-cCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhC-CCCHHHHHHHHHHHH
Q 010291 77 PNIKKEVLAAGALQPVIGLL-SSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQ-SPDVQLREMSAFALG 154 (513)
Q Consensus 77 ~~~~~~~~~~g~i~~L~~ll-~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~-~~~~~~~~~a~~~L~ 154 (513)
.+. + ++..|+..+ ++.+..+++.++.+|+.+..++++. ++.++..|. +.++.+|..++.+++
T Consensus 504 gn~-~------ai~~LL~~~~e~~~e~vrR~aalgLGll~~g~~e~---------~~~li~~L~~~~dp~vRygaa~alg 567 (963)
T 4ady_A 504 GKP-E------AIHDMFTYSQETQHGNITRGLAVGLALINYGRQEL---------ADDLITKMLASDESLLRYGGAFTIA 567 (963)
T ss_dssp CCH-H------HHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCGGG---------GHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred CCH-H------HHHHHHHHHhccCcHHHHHHHHHHHHhhhCCChHH---------HHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 221 1 244555543 4567889999999999998776653 556666665 468888888888877
Q ss_pred HHhhccccchhhHhcCChHHHHHHh-cCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhhhhHHHHHHH
Q 010291 155 RLAQDMHNQAGIAHNGGLVPLLKLL-DSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKT 233 (513)
Q Consensus 155 ~l~~~~~~~~~~~~~~~i~~L~~ll-~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~ 233 (513)
--..+..+.. +++.|++.+ .+.++.++..|+.+|+.+......
T Consensus 568 lAyaGTGn~~------aIq~LL~~~~~d~~d~VRraAViaLGlI~~g~~e------------------------------ 611 (963)
T 4ady_A 568 LAYAGTGNNS------AVKRLLHVAVSDSNDDVRRAAVIALGFVLLRDYT------------------------------ 611 (963)
T ss_dssp HHTTTSCCHH------HHHHHHHHHHHCSCHHHHHHHHHHHHHHTSSSCS------------------------------
T ss_pred HHhcCCCCHH------HHHHHHHHhccCCcHHHHHHHHHHHHhhccCCHH------------------------------
Confidence 5544443332 345555444 466788999999999987653321
Q ss_pred HHHHHHHhhhhhHHHHHHH-HHHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcCCCcchhhhHHHHHHHh
Q 010291 234 LKRLEEKIHGRVLNHLLYL-MRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGSTNPKQQLDGAVALFKL 312 (513)
Q Consensus 234 ~~~~~~~~~~~~l~~Lv~l-L~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l 312 (513)
.++.++.. +++.++.+|..++.+|+.++.+... ..+++.|..+..++++.|+..|+.+|..+
T Consensus 612 -----------~v~rlv~~L~~~~d~~VR~gAalALGli~aGn~~------~~aid~L~~L~~D~d~~Vrq~Ai~ALG~I 674 (963)
T 4ady_A 612 -----------TVPRIVQLLSKSHNAHVRCGTAFALGIACAGKGL------QSAIDVLDPLTKDPVDFVRQAAMIALSMI 674 (963)
T ss_dssp -----------SHHHHTTTGGGCSCHHHHHHHHHHHHHHTSSSCC------HHHHHHHHHHHTCSSHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHhcCCHHHHHHHHHHHHHhccCCCc------HHHHHHHHHHccCCCHHHHHHHHHHHHHH
Confidence 13334443 3457889999999999999865442 23577888888899999999999999988
Q ss_pred hhc
Q 010291 313 ANK 315 (513)
Q Consensus 313 ~~~ 315 (513)
...
T Consensus 675 g~g 677 (963)
T 4ady_A 675 LIQ 677 (963)
T ss_dssp STT
T ss_pred hcC
Confidence 754
No 107
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=98.52 E-value=1.2e-08 Score=82.40 Aligned_cols=121 Identities=20% Similarity=0.221 Sum_probs=93.7
Q ss_pred cCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhH
Q 010291 44 CNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKV 123 (513)
Q Consensus 44 ~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~ 123 (513)
...++.++.+|+++++.+|..|+++|+.+... .++.|+.++.++++.++..|+++|+++.. +
T Consensus 11 ~~~~~~l~~~L~~~~~~vR~~A~~~L~~~~~~------------~~~~L~~~L~d~~~~vR~~A~~aL~~~~~--~---- 72 (131)
T 1te4_A 11 SSGLVPRGSHMADENKWVRRDVSTALSRMGDE------------AFEPLLESLSNEDWRIRGAAAWIIGNFQD--E---- 72 (131)
T ss_dssp ----------CCSSCCCSSSSCCSSTTSCSST------------THHHHHHGGGCSCHHHHHHHHHHHGGGCS--H----
T ss_pred cccHHHHHHHhcCCCHHHHHHHHHHHHHhCch------------HHHHHHHHHcCCCHHHHHHHHHHHHhcCC--H----
Confidence 45678899999999999999999998876421 36889999999999999999999999852 1
Q ss_pred HHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhc
Q 010291 124 HIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGL 197 (513)
Q Consensus 124 ~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l 197 (513)
..++.|+..++++++.++..++++|.++.. ...++.|..++.++++.++..|+.+|.++
T Consensus 73 -----~a~~~L~~~L~d~~~~VR~~A~~aL~~~~~----------~~a~~~L~~~l~d~~~~vr~~A~~aL~~i 131 (131)
T 1te4_A 73 -----RAVEPLIKLLEDDSGFVRSGAARSLEQIGG----------ERVRAAMEKLAETGTGFARKVAVNYLETH 131 (131)
T ss_dssp -----HHHHHHHHHHHHCCTHHHHHHHHHHHHHCS----------HHHHHHHHHHTTSCCTHHHHHHHHHGGGC
T ss_pred -----HHHHHHHHHHcCCCHHHHHHHHHHHHHhCc----------HHHHHHHHHHHhCCCHHHHHHHHHHHHhC
Confidence 247889999999999999999999999852 24577899999999999999999988754
No 108
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.51 E-value=3.8e-07 Score=69.75 Aligned_cols=96 Identities=17% Similarity=0.243 Sum_probs=77.6
Q ss_pred cccEEEEecCeeehhhHHHHhhcC-HHHHHhccCCCC----CCCCCceecCCCCHHHHHHHHHHHhcCccccCHHH-HHH
Q 010291 345 LSDVTFLVEGRRFYAHRICLLASS-DAFRAMFDGGYR----EKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDI-AQD 418 (513)
Q Consensus 345 ~~Dv~~~~~~~~~~~h~~il~~~s-~~f~~~~~~~~~----e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~~-~~~ 418 (513)
..-|.+.|||..|...+..|.... .+|.+||+++.. ......+-+ |-++..|+.+|+|+.+|.+.++.+. ...
T Consensus 5 ~~~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 5 SKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp CCEEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred CCEEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 345788999999999999999775 578999976521 113345555 5799999999999999999876543 478
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHh
Q 010291 419 LLRAADQYLLEGLKRLCEYTIAQ 441 (513)
Q Consensus 419 ll~~A~~~~~~~l~~~c~~~l~~ 441 (513)
+++-|++|++++|++.|++.+.+
T Consensus 84 l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 84 VLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHhc
Confidence 99999999999999999998865
No 109
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=98.40 E-value=2.2e-05 Score=82.07 Aligned_cols=243 Identities=14% Similarity=0.077 Sum_probs=162.7
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhc-CCCHHHHHHHHHHHHHhhcCChhHHHHH
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLR-SEDSAIHYEAVGVIGNLVHSSPNIKKEV 83 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 83 (513)
++.|...|.+++..++..|+.+|+.+--|+. + ..++..|++.+. +.+..+++.++.+|+.+..+.++
T Consensus 474 ~e~L~~~L~dd~~~~~~~AalALGli~vGTg-n------~~ai~~LL~~~~e~~~e~vrR~aalgLGll~~g~~e----- 541 (963)
T 4ady_A 474 YEALKEVLYNDSATSGEAAALGMGLCMLGTG-K------PEAIHDMFTYSQETQHGNITRGLAVGLALINYGRQE----- 541 (963)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHTTCC-C------HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCGG-----
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccC-C------HHHHHHHHHHHhccCcHHHHHHHHHHHHhhhCCChH-----
Confidence 5667777877777777788888887643211 1 113455665543 66788999999999999877665
Q ss_pred HhCCChHHHHHhhc-CCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhC-CCCHHHHHHHHHHHHHHhhccc
Q 010291 84 LAAGALQPVIGLLS-SCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQ-SPDVQLREMSAFALGRLAQDMH 161 (513)
Q Consensus 84 ~~~g~i~~L~~ll~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~-~~~~~~~~~a~~~L~~l~~~~~ 161 (513)
.++.+++.|. +.++.+|..++.+++.-..+.... . .++.|+..+. +.+..+|..|+.+|+.+..+.+
T Consensus 542 ----~~~~li~~L~~~~dp~vRygaa~alglAyaGTGn~-~------aIq~LL~~~~~d~~d~VRraAViaLGlI~~g~~ 610 (963)
T 4ady_A 542 ----LADDLITKMLASDESLLRYGGAFTIALAYAGTGNN-S------AVKRLLHVAVSDSNDDVRRAAVIALGFVLLRDY 610 (963)
T ss_dssp ----GGHHHHHHHHHCSCHHHHHHHHHHHHHHTTTSCCH-H------HHHHHHHHHHHCSCHHHHHHHHHHHHHHTSSSC
T ss_pred ----HHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCCH-H------HHHHHHHHhccCCcHHHHHHHHHHHHhhccCCH
Confidence 4666777665 577888988888887665443221 1 3555555544 5678899999999999875543
Q ss_pred cchhhHhcCChHHHHH-HhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHH
Q 010291 162 NQAGIAHNGGLVPLLK-LLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEK 240 (513)
Q Consensus 162 ~~~~~~~~~~i~~L~~-ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~ 240 (513)
..++.++. +..+.++.++..++.+|+.++.....
T Consensus 611 --------e~v~rlv~~L~~~~d~~VR~gAalALGli~aGn~~------------------------------------- 645 (963)
T 4ady_A 611 --------TTVPRIVQLLSKSHNAHVRCGTAFALGIACAGKGL------------------------------------- 645 (963)
T ss_dssp --------SSHHHHTTTGGGCSCHHHHHHHHHHHHHHTSSSCC-------------------------------------
T ss_pred --------HHHHHHHHHHHhcCCHHHHHHHHHHHHHhccCCCc-------------------------------------
Confidence 23455555 44678899999999999999864432
Q ss_pred hhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcC--CCcchhhhHHHHHHHhhhccc
Q 010291 241 IHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGS--TNPKQQLDGAVALFKLANKAT 317 (513)
Q Consensus 241 ~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~--~~~~v~~~a~~~L~~l~~~~~ 317 (513)
..++..|..++++++..|+..|+.+|+.+.....+...-.-.+....|.....+ .++..+..+..+.+-+.....
T Consensus 646 --~~aid~L~~L~~D~d~~Vrq~Ai~ALG~Ig~gtnna~~~rva~~l~~L~~~~~dk~~d~~~~fga~iAqGll~aG~~ 722 (963)
T 4ady_A 646 --QSAIDVLDPLTKDPVDFVRQAAMIALSMILIQQTEKLNPQVADINKNFLSVITNKHQEGLAKFGACVAQGIMNAGGR 722 (963)
T ss_dssp --HHHHHHHHHHHTCSSHHHHHHHHHHHHHHSTTCCTTTCTTHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHTTGGG
T ss_pred --HHHHHHHHHHccCCCHHHHHHHHHHHHHHhcCCccccchHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhcCCC
Confidence 235666777788899999999999999997654432110012234555566654 355567677666665544433
No 110
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.38 E-value=6.8e-07 Score=68.49 Aligned_cols=81 Identities=21% Similarity=0.340 Sum_probs=62.8
Q ss_pred cEEEE-ecCeeehhhHHHHhhcCHHHHHhccC--CCCCCCCCceecCCCCHHHHHHHHHHHhcCc-----------cccC
Q 010291 347 DVTFL-VEGRRFYAHRICLLASSDAFRAMFDG--GYREKDARDIEIPNIRWEVFELMMRFIYTGS-----------VDVT 412 (513)
Q Consensus 347 Dv~~~-~~~~~~~~h~~il~~~s~~f~~~~~~--~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~-----------~~~~ 412 (513)
-+.+. .+|..|.+++.+ +..|+.++.|+.. .+.|+....|+|++++..+++.+++|+|.-. .+++
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd 96 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 96 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCcccC
Confidence 35555 378999999995 6799999999974 3456656789999999999999999998643 2477
Q ss_pred HHHHHHHHHHHHHhcH
Q 010291 413 LDIAQDLLRAADQYLL 428 (513)
Q Consensus 413 ~~~~~~ll~~A~~~~~ 428 (513)
.+.+.+|+.||+||++
T Consensus 97 ~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 97 PEIALELLMAANFLDC 112 (112)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 8899999999999974
No 111
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=98.30 E-value=1.2e-06 Score=78.91 Aligned_cols=195 Identities=12% Similarity=0.103 Sum_probs=137.0
Q ss_pred HHHHhhcCCChHHHHHHHHHHHH-hhcCCchhhHHHHh-cCChHHHHHHh-CCCCHHHHHHHHHHHHHHhhccc-cchh-
Q 010291 91 PVIGLLSSCCSESQREAALLLGQ-FAATDSDCKVHIVQ-RGAVRPLIEML-QSPDVQLREMSAFALGRLAQDMH-NQAG- 165 (513)
Q Consensus 91 ~L~~ll~~~~~~~~~~a~~~L~~-l~~~~~~~~~~~~~-~~~i~~L~~~l-~~~~~~~~~~a~~~L~~l~~~~~-~~~~- 165 (513)
.+.+.+.+.++.-|..|+..|.. +..+.+.....-.+ ...+..|.+.+ ++.+..++..|+.+|..++.+-. ..-.
T Consensus 20 ~f~~~l~s~~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~ 99 (249)
T 2qk1_A 20 DFQERITSSKWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSK 99 (249)
T ss_dssp THHHHHTCSSHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCH
T ss_pred hHHHHhhcCCHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccH
Confidence 35566778899999999999999 87554332100001 13467788888 78899999999999999995432 1111
Q ss_pred hHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhh
Q 010291 166 IAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRV 245 (513)
Q Consensus 166 ~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (513)
-.....++.++..+.+....++..+..++..++.+..... ..+ .-..+
T Consensus 100 ~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~---~~~-----------------------------~l~~l 147 (249)
T 2qk1_A 100 DYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLA---SSG-----------------------------RNEDM 147 (249)
T ss_dssp HHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTC---TTC-----------------------------TTHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccccc---cCC-----------------------------cHHHH
Confidence 1122467789999999999999988888888876321000 000 01236
Q ss_pred HHHHHHHHHHhhcchhhhHHHHHhhccCCCCc--ce--eeecCCchHHHHhhhcCCCcchhhhHHHHHHHhhhccc
Q 010291 246 LNHLLYLMRVAEKGVQRRVALALAHLCSPDDQ--RT--IFIDGGGLELLLGLLGSTNPKQQLDGAVALFKLANKAT 317 (513)
Q Consensus 246 l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~--~~--~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 317 (513)
++.|+..|+++++.+|..++.+|..++..... .. ..+....+|.|.+++.++++++|..|..++..++....
T Consensus 148 l~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~i~~~vG 223 (249)
T 2qk1_A 148 LKDILEHMKHKTPQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFAILIKIFG 223 (249)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhC
Confidence 78888999999999999999999999753321 11 11124688999999999999999999999998876543
No 112
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=98.21 E-value=6e-05 Score=68.65 Aligned_cols=156 Identities=15% Similarity=0.148 Sum_probs=124.6
Q ss_pred hHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHH-
Q 010291 6 PPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVL- 84 (513)
Q Consensus 6 ~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~- 84 (513)
..+++.|.+++...+..++..|..+-..+.+....+++.+|+..|+......+.+.+..++.+|.++-...... ..++
T Consensus 121 ~~iiekL~~~~~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~v~Gm-~gvvs 199 (339)
T 3dad_A 121 NAILEKLYSSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDGM-LGVVA 199 (339)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSHHHH-HHHHH
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHhccccc-cchhC
Confidence 45677788888888999999999955557899999999999999999999989999999999999998764443 3333
Q ss_pred hCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHh--------c--CChHHHHHHhC---CCCHHHHHHHHH
Q 010291 85 AAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQ--------R--GAVRPLIEMLQ---SPDVQLREMSAF 151 (513)
Q Consensus 85 ~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~--------~--~~i~~L~~~l~---~~~~~~~~~a~~ 151 (513)
....|..+..++.+.+..+.+.|+..|..++..++.+...+.+ . .-.+.|+.+|+ +.|.+++.+|..
T Consensus 200 ~~~fI~~lyslv~s~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~~~~D~elq~~amt 279 (339)
T 3dad_A 200 HSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTVT 279 (339)
T ss_dssp CHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTTSCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCccHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHHHHhccCCCCHHHHHHHHH
Confidence 4457888888999888999999999999999776644433322 1 23778999997 679999999998
Q ss_pred HHHHHhhcccc
Q 010291 152 ALGRLAQDMHN 162 (513)
Q Consensus 152 ~L~~l~~~~~~ 162 (513)
.+..+....+.
T Consensus 280 LIN~lL~~apd 290 (339)
T 3dad_A 280 LINKTLAALPD 290 (339)
T ss_dssp HHHHHHHHCSS
T ss_pred HHHHHHhcCCC
Confidence 88877765444
No 113
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=98.04 E-value=0.00012 Score=70.18 Aligned_cols=229 Identities=15% Similarity=0.160 Sum_probs=144.9
Q ss_pred HHHhhcc-CCHHHHHHHHHHHHHhhccCchhHHHHHhcC--CHHHHHHhhcC---------------C--CHHHHHHHHH
Q 010291 8 LVELLEF-TDTKVQRAAAGALRTLAFKNDENKNQIVECN--ALPTLILMLRS---------------E--DSAIHYEAVG 67 (513)
Q Consensus 8 Lv~lL~~-~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g--~i~~Lv~lL~~---------------~--~~~v~~~a~~ 67 (513)
++..|.. ++.+.+.-++.+|..+.. .++.|..+.+.+ .++.++..++. + ...++..++.
T Consensus 172 ~~~~L~~~~~~~~~~i~v~~L~~Ll~-~~~~R~~f~~~~~~~~~~l~~il~~~~~~~~~~~~~~~~~~~~~~Ql~Y~~ll 250 (480)
T 1ho8_A 172 LINILQNIEQMDTCYVCIRLLQELAV-IPEYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLL 250 (480)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHT-SHHHHHHHHTTHHHHHHHHHHHHHHHHC-------------CCHHHHHHHHHH
T ss_pred HHHHhccccCCchHHHHHHHHHHHhc-chhHHHHHHHcccchhHHHHHHHHHhhccccccccccccCCCccHHHHHHHHH
Confidence 3444544 245567788999999998 788888887653 35666544331 1 2456888999
Q ss_pred HHHHhhcCChhHHHHHHhCCCh--HHHHHhhcC-CChHHHHHHHHHHHHhhcCCchhh----H-HHHhcCChHHHHHHhC
Q 010291 68 VIGNLVHSSPNIKKEVLAAGAL--QPVIGLLSS-CCSESQREAALLLGQFAATDSDCK----V-HIVQRGAVRPLIEMLQ 139 (513)
Q Consensus 68 ~L~~l~~~~~~~~~~~~~~g~i--~~L~~ll~~-~~~~~~~~a~~~L~~l~~~~~~~~----~-~~~~~~~i~~L~~~l~ 139 (513)
++|.++.+ +...+.+...+.. +.|+..++. ....+.+-+..+|.|+....+... . .++..++ ..+++.|.
T Consensus 251 ~iWlLSF~-~~~~~~l~~~~i~~~~~L~~i~k~s~KEKvvRv~la~l~Nll~~~~~~~~~~~~~~~~~~~~-l~~l~~L~ 328 (480)
T 1ho8_A 251 LIWLLTFN-PVFANELVQKYLSDFLDLLKLVKITIKEKVSRLCISIILQCCSTRVKQHKKVIKQLLLLGNA-LPTVQSLS 328 (480)
T ss_dssp HHHHHTTS-HHHHHHHHTTSHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTSSSSTTHHHHHHHHHHHHCH-HHHHHHHH
T ss_pred HHHHHHcC-HHHHHHHHhcchHHHHHHHHHHHhhccchhHHHHHHHHHHHhcccchhhhhHHHHHHHHccc-hHHHHHHh
Confidence 99999977 5555666666533 455665654 568899999999999987653211 2 2222334 44555665
Q ss_pred C---CCHHHHHHHHHHHHHHhhc----------------------cccch---------hhHhc--CChHHHHHHhcC--
Q 010291 140 S---PDVQLREMSAFALGRLAQD----------------------MHNQA---------GIAHN--GGLVPLLKLLDS-- 181 (513)
Q Consensus 140 ~---~~~~~~~~a~~~L~~l~~~----------------------~~~~~---------~~~~~--~~i~~L~~ll~~-- 181 (513)
. .|+++.+..-.....|... +..+. ++.+. ..+..|+++|.+
T Consensus 329 ~rk~~Dedl~edl~~L~e~L~~~~~~ltsfDeY~~El~sG~L~WSP~H~se~FW~ENa~kf~e~~~~llk~L~~iL~~~~ 408 (480)
T 1ho8_A 329 ERKYSDEELRQDISNLKEILENEYQELTSFDEYVAELDSKLLCWSPPHVDNGFWSDNIDEFKKDNYKIFRQLIELLQAKV 408 (480)
T ss_dssp SSCCSSHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTCCCCCGGGGCHHHHHHHSGGGSSGGGHHHHHHHHHHHHHH
T ss_pred hCCCCcHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHhcCCcccCCCccchhHHHHHHHHHHhcchHHHHHHHHHHhhhc
Confidence 4 3777655443333222211 11111 12221 125668888873
Q ss_pred --------CCHHHHHHHHHHHHhccc-CcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 010291 182 --------KNGSLQHNAAFALYGLAD-NEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYL 252 (513)
Q Consensus 182 --------~~~~~~~~a~~~L~~l~~-~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~l 252 (513)
.|+.+...||.-|+.+++ +|..+..+.+. |+=..++.+
T Consensus 409 ~~~~~~~s~d~~~laVAc~Digefvr~~P~gr~i~~~l---------------------------------g~K~~VM~L 455 (480)
T 1ho8_A 409 RNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKT---------------------------------GGKADIMEL 455 (480)
T ss_dssp HTTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHH---------------------------------SHHHHHHHH
T ss_pred cccccccCCCcceEEeecccHHHHHHHCcchhHHHHHc---------------------------------CcHHHHHHH
Confidence 357788889999999998 55544433332 345667889
Q ss_pred HHHhhcchhhhHHHHHhhcc
Q 010291 253 MRVAEKGVQRRVALALAHLC 272 (513)
Q Consensus 253 L~~~~~~v~~~a~~aL~~l~ 272 (513)
|.++|++|+.+|+.++..+.
T Consensus 456 m~h~d~~Vr~~AL~avQklm 475 (480)
T 1ho8_A 456 LNHSDSRVKYEALKATQAII 475 (480)
T ss_dssp TSCSSHHHHHHHHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHH
Confidence 99999999999999987653
No 114
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=97.82 E-value=0.00074 Score=61.56 Aligned_cols=151 Identities=13% Similarity=0.079 Sum_probs=116.2
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHH
Q 010291 47 LPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIV 126 (513)
Q Consensus 47 i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~ 126 (513)
+..+++-|.+.+...++.++.-|..+..........++..+|+..|+......+.+.+..++.+|.++... ......++
T Consensus 120 a~~iiekL~~~~~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~-v~Gm~gvv 198 (339)
T 3dad_A 120 VNAILEKLYSSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLF-VDGMLGVV 198 (339)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTS-HHHHHHHH
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHhc-cccccchh
Confidence 34566667777788889999999985545577788999999999999999999999999999999999854 33333333
Q ss_pred -hcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccchhhHh--------cC---ChHHHHHHhc---CCCHHHHHHHH
Q 010291 127 -QRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQAGIAH--------NG---GLVPLLKLLD---SKNGSLQHNAA 191 (513)
Q Consensus 127 -~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~--------~~---~i~~L~~ll~---~~~~~~~~~a~ 191 (513)
...++..+..++.+.+..+.+.|+..|..++...+....++. .. ....|+.+|. ..|.+++.++.
T Consensus 199 s~~~fI~~lyslv~s~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~~~~D~elq~~am 278 (339)
T 3dad_A 199 AHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTV 278 (339)
T ss_dssp HCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTTSCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCccHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHHHHhccCCCCHHHHHHHH
Confidence 566889999999988999999999999999977654322211 11 2667999997 67888888887
Q ss_pred HHHHhcc
Q 010291 192 FALYGLA 198 (513)
Q Consensus 192 ~~L~~l~ 198 (513)
..|-.+-
T Consensus 279 tLIN~lL 285 (339)
T 3dad_A 279 TLINKTL 285 (339)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7665543
No 115
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=97.81 E-value=0.00062 Score=72.15 Aligned_cols=257 Identities=13% Similarity=0.133 Sum_probs=170.1
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhccCc---hhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCC-hhHH
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFKND---ENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSS-PNIK 80 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~---~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~-~~~~ 80 (513)
+..|.+.+...... +.|+.++..++.... ..-..+ .+.++.++....+....||..|-.++..+...- +...
T Consensus 56 ~~~~~~~~~~k~~~--~~a~~~~~~~~~~~~~~~~~e~~~--~~~~~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~a~ 131 (986)
T 2iw3_A 56 FGELAKGIKDKKTA--ANAMQAVAHIANQSNLSPSVEPYI--VQLVPAICTNAGNKDKEIQSVASETLISIVNAVNPVAI 131 (986)
T ss_dssp HHHHHHHHTSHHHH--HHHHHHHHHHTCTTTCCTTTHHHH--HTTHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGGGH
T ss_pred HHHHHHHHhccCCH--HHHHHHHHHHHHhcCCCCCcccch--HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhCCHHHH
Confidence 34444444443223 889999999985322 221222 256888888888888999999888887776532 3222
Q ss_pred HHHHhCCChHHHHHhhcCC-ChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhc
Q 010291 81 KEVLAAGALQPVIGLLSSC-CSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 81 ~~~~~~g~i~~L~~ll~~~-~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~ 159 (513)
...++.|+..+.+. .+..+..|+.++..++...+. .....-..++|.+...+-+..+++...|..++..+|..
T Consensus 132 -----~~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~ 205 (986)
T 2iw3_A 132 -----KALLPHLTNAIVETNKWQEKIAILAAFSAMVDAAKD-QVALRMPELIPVLSETMWDTKKEVKAAATAAMTKATET 205 (986)
T ss_dssp -----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHSHH-HHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHGGG
T ss_pred -----HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhHH-HHHHhccchhcchHhhcccCcHHHHHHHHHHHHHHHhc
Confidence 23578888888765 688999999999999865543 22233356888888999999999999999999999976
Q ss_pred cccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHH
Q 010291 160 MHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEE 239 (513)
Q Consensus 160 ~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~ 239 (513)
-.|+.. ...++.|++.+.+++. ...++..|+.-+.-.+.
T Consensus 206 ~~n~d~---~~~~~~~~~~~~~p~~--~~~~~~~l~~~tfv~~v------------------------------------ 244 (986)
T 2iw3_A 206 VDNKDI---ERFIPSLIQCIADPTE--VPETVHLLGATTFVAEV------------------------------------ 244 (986)
T ss_dssp CCCTTT---GGGHHHHHHHHHCTTH--HHHHHHHHTTCCCCSCC------------------------------------
T ss_pred CCCcch---hhhHHHHHHHhcChhh--hHHHHHHhhcCeeEeee------------------------------------
Confidence 666543 2568889999988744 33445555544432221
Q ss_pred Hhhhh----hHHHHHHHHHHhhcchhhhHHHHHhhccCCCCccee--eecCCchHHHHhhhcC-CCcchhhhHHHHHHHh
Q 010291 240 KIHGR----VLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTI--FIDGGGLELLLGLLGS-TNPKQQLDGAVALFKL 312 (513)
Q Consensus 240 ~~~~~----~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~--l~~~~~i~~L~~ll~~-~~~~v~~~a~~~L~~l 312 (513)
+.- .+|.|..-|......++..++.++.|+|.--+.... -.--..+|-|.+.... .+|++|..+..++..|
T Consensus 245 --~~~~l~~~~p~l~r~l~~~~~~~~r~~~~~~~n~~~lv~~~~~~~~f~~~l~p~~~~~~~~~~~pe~r~~~~~a~~~l 322 (986)
T 2iw3_A 245 --TPATLSIMVPLLSRGLNERETGIKRKSAVIIDNMCKLVEDPQVIAPFLGKLLPGLKSNFATIADPEAREVTLRALKTL 322 (986)
T ss_dssp --CHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHTTCCCHHHHHHHHTTTHHHHHHHTTTCCSHHHHHHHHHHHHHH
T ss_pred --cchhHHHHHHHHHhhhccCcchhheeeEEEEcchhhhcCCHHHHhhhhhhhhhHHHHHhhccCCHHHHHHHHHHHHHH
Confidence 111 244455555556788889999999999974332211 1112345555555544 8899998888887777
Q ss_pred hh
Q 010291 313 AN 314 (513)
Q Consensus 313 ~~ 314 (513)
.+
T Consensus 323 ~~ 324 (986)
T 2iw3_A 323 RR 324 (986)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 116
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.60 E-value=7.4e-05 Score=62.88 Aligned_cols=98 Identities=16% Similarity=0.242 Sum_probs=76.8
Q ss_pred CCcccEEEEecCeeehhhHHHHhhcC-HHHHHhccCCC--C--CCCCCceecCCCCHHHHHHHHHHHhcCccccCHHH-H
Q 010291 343 ATLSDVTFLVEGRRFYAHRICLLASS-DAFRAMFDGGY--R--EKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDI-A 416 (513)
Q Consensus 343 ~~~~Dv~~~~~~~~~~~h~~il~~~s-~~f~~~~~~~~--~--e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~~-~ 416 (513)
+...-|.+.|||..|...+..|.... .+|..||.++. . ....+.+-+ |-++..|+.+|+|+-+|.+.++.+. .
T Consensus 9 ~~~~~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~~ 87 (202)
T 3drx_A 9 SVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAE 87 (202)
T ss_dssp CCCCEEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSCH
T ss_pred CCCCEEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCCCH
Confidence 34456788999999999999998654 47889987642 1 112345555 4599999999999999999876543 4
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHh
Q 010291 417 QDLLRAADQYLLEGLKRLCEYTIAQ 441 (513)
Q Consensus 417 ~~ll~~A~~~~~~~l~~~c~~~l~~ 441 (513)
..++.-|+||+++.|.+.|++.+.+
T Consensus 88 ~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 88 EGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 6799999999999999999998865
No 117
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}
Probab=97.53 E-value=0.00018 Score=69.48 Aligned_cols=241 Identities=14% Similarity=0.118 Sum_probs=151.9
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHh--cCCHHHHHHhhc-C------CC---HHHHHHHHHHHHHh
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVE--CNALPTLILMLR-S------ED---SAIHYEAVGVIGNL 72 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~--~g~i~~Lv~lL~-~------~~---~~v~~~a~~~L~~l 72 (513)
.+.|+.-|-++.+++|..|+-+|+.+.+........... ....-.++-.|. + +| .-||+.|+.+|+.+
T Consensus 176 cE~L~~DLFdp~WEiRHGAALGLREILR~hG~GAGR~~~~N~DLAvRLLCVLALDRFGDYVSDqVVAPVRETaAQtLGaL 255 (800)
T 3oc3_A 176 FEQISDNLLSYEWYKRHGAFLAFAAMFSEIDNGGDIQIRVDSKLFSKIYEILVTDKFNDFVDDRTVAPVRDAAAYLLSRI 255 (800)
T ss_dssp THHHHHHTTCSSHHHHHHHHHHHHHHHHHCC----CCCCCCTTHHHHHHHHHHHBCCBBCSSSSCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcchhhhhHHHHHHHHHHHHhccCCceeccccHHHHHHHHHHHHhccccccccCeeeeehHHHHHHHHHHH
Confidence 345666677899999999999999997643321111111 122223333332 1 12 45899999999998
Q ss_pred hcCChhHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHH
Q 010291 73 VHSSPNIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFA 152 (513)
Q Consensus 73 ~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~ 152 (513)
..-+.. ..++..++..+....++++..+...|..+... ... -.++++.++..|++.|.+|+..|+.+
T Consensus 256 -~hLp~e------~~IL~qLV~~l~~~~WEVRHGGLLGLKYL~DL---L~~---Ld~Vv~aVL~GL~D~DDDVRAVAAet 322 (800)
T 3oc3_A 256 -YPLIGP------NDIIEQLVGFLDSGDWQVQFSGLIALGYLKEF---VED---KDGLCRKLVSLLSSPDEDIKLLSAEL 322 (800)
T ss_dssp -TTTSCS------CCHHHHHTTGGGCSCHHHHHHHHHHHHHTGGG---CCC---HHHHHHHHHHHTTCSSHHHHHHHHHH
T ss_pred -HhCChh------HHHHHHHHhhcCCCCeeehhhhHHHHHHHHHH---HHH---HHHHHHHHHhhcCCcccHHHHHHHHH
Confidence 544432 34555555556778899999999999988211 111 24568888899999999999999999
Q ss_pred HHHHhhccccchhhHhcCChHHHHHHhcCCC--HHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhhhhHHHH
Q 010291 153 LGRLAQDMHNQAGIAHNGGLVPLLKLLDSKN--GSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQATKDCV 230 (513)
Q Consensus 153 L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~--~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~ 230 (513)
|.-++ .++.- ...+..+...|.+-| ..-.......|+.|+..+.. ..
T Consensus 323 LiPIA-~p~~l-----~~LL~iLWd~L~~LDDLSASTgSVMdLLAkL~s~p~~------a~------------------- 371 (800)
T 3oc3_A 323 LCHFP-ITDSL-----DLVLEKCWKNIESEELISVSKTSNLSLLTKIYRENPE------LS------------------- 371 (800)
T ss_dssp HTTSC-CSSTH-----HHHHHHHHHHHHTCCSCCTTHHHHHHHHHHHHHHCTT------CC-------------------
T ss_pred hhhhc-chhhH-----HHHHHHHHHHhhhhcccchhhHHHHHHHHHHHcCCcc------cc-------------------
Confidence 99988 11111 123344555555432 12233455566666665421 00
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHHH-hhhcCCCcchhhhHHHHH
Q 010291 231 AKTLKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLL-GLLGSTNPKQQLDGAVAL 309 (513)
Q Consensus 231 ~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~-~ll~~~~~~v~~~a~~~L 309 (513)
.+...+|.|..+++++-+.||..++.++..+. ....+..+. +++-..+++++..+..+-
T Consensus 372 ----------~dp~LVPRL~PFLRHtITSVR~AVL~TL~tfL----------~~~~LRLIFQNILLE~neeIl~lS~~VW 431 (800)
T 3oc3_A 372 ----------IPPERLKDIFPCFTSPVPEVRTSILNMVKNLS----------EESIDFLVAEVVLIEEKDEIREMAIKLL 431 (800)
T ss_dssp ----------CCSGGGGGTGGGGTCSSHHHHHHHHHHTTTCC----------CHHHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred ----------cChHHHHHHHhhhcCCcHHHHHHHHHHHHHHH----------hhhHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 12357889999999999999999999998876 222343333 444567888877665544
No 118
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=97.52 E-value=0.0029 Score=57.73 Aligned_cols=186 Identities=11% Similarity=0.061 Sum_probs=124.6
Q ss_pred HHHhhccCCHHHHHHHHHHHHHhhccCchhH--HHHH-h-cCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChh-----
Q 010291 8 LVELLEFTDTKVQRAAAGALRTLAFKNDENK--NQIV-E-CNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPN----- 78 (513)
Q Consensus 8 Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~--~~i~-~-~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~----- 78 (513)
+-+.|.|.++..|..|+..|..+....+... .... . ....+.+-..+.+.|..++..++.++..++.....
T Consensus 14 l~e~l~sk~WK~R~eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~l~DsN~~v~~~al~~l~~~~~~~~~~~~~~ 93 (278)
T 4ffb_C 14 LEERLTYKLWKARLEAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQYITDSNVVAQEQAIVALNSLIDAFASSSLKN 93 (278)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHHHTC----------CCTTSCTHHHHHHTTCSSHHHHHHHHHHHHHHHTTCC---CCH
T ss_pred HHHhcccCcHHHHHHHHHHHHHHHhhCcccccchhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhccc
Confidence 6678899999999999999988876433211 1111 1 23455666788899999999999999988753211
Q ss_pred HHHHHHhCCChHHHHH-hhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 010291 79 IKKEVLAAGALQPVIG-LLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLA 157 (513)
Q Consensus 79 ~~~~~~~~g~i~~L~~-ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~ 157 (513)
......-...++.|+. .+.+....++..+..++..++...... .. +++.+...+++.+|.++..++..|..+.
T Consensus 94 ~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~-~~-----~~e~l~~~l~~Knpkv~~~~l~~l~~~l 167 (278)
T 4ffb_C 94 AHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSI-TQ-----SVELVIPFFEKKLPKLIAAAANCVYELM 167 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSS-HH-----HHHHHGGGGGCSCHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcH-HH-----HHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 1111122335666665 467788889988888888776432221 11 2456777888899999999999998887
Q ss_pred hccccch---hhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhccc
Q 010291 158 QDMHNQA---GIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLAD 199 (513)
Q Consensus 158 ~~~~~~~---~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~ 199 (513)
.....+. ...-...++.+..++.+.++.|+..|..++..+-.
T Consensus 168 ~~fg~~~~~~k~~l~~i~~~l~k~l~d~~~~VR~aA~~l~~~ly~ 212 (278)
T 4ffb_C 168 AAFGLTNVNVQTFLPELLKHVPQLAGHGDRNVRSQTMNLIVEIYK 212 (278)
T ss_dssp HHHTTTTCCHHHHHHHHGGGHHHHHTCSSHHHHHHHHHHHHHHHT
T ss_pred HHhCCCcCCchhHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 5422211 11112345568888999999999999999988765
No 119
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=97.45 E-value=0.004 Score=67.71 Aligned_cols=304 Identities=12% Similarity=0.067 Sum_probs=160.8
Q ss_pred HHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCCh------hHH
Q 010291 7 PLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSP------NIK 80 (513)
Q Consensus 7 ~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~------~~~ 80 (513)
.+++.+.++++.+|..++.++..++... ... ...+.++.|++++.++++..+..++.+|..++.... +.+
T Consensus 89 ~ll~~l~~~~~~ir~~l~~~ia~ia~~d--~p~--~Wp~ll~~L~~~l~s~~~~~~~~aL~~l~~i~~~~~~~~~~~~~~ 164 (960)
T 1wa5_C 89 EIVPLMISLPNNLQVQIGEAISSIADSD--FPD--RWPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELF 164 (960)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHHHHHH--STT--TCTTHHHHHHTTCCSSCTTHHHHHHHHHHHHHGGGTTSCCCHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhh--Ccc--chhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhcChHHH
Confidence 4555665566888999999999988631 111 135678889999988888899999999999986321 222
Q ss_pred HHHH--hCCChHHHHH-------hhcCCCh---------HHHHHHHHHHHHhhcCC-chhhHHHHhcCChHHHHHHhCCC
Q 010291 81 KEVL--AAGALQPVIG-------LLSSCCS---------ESQREAALLLGQFAATD-SDCKVHIVQRGAVRPLIEMLQSP 141 (513)
Q Consensus 81 ~~~~--~~g~i~~L~~-------ll~~~~~---------~~~~~a~~~L~~l~~~~-~~~~~~~~~~~~i~~L~~~l~~~ 141 (513)
..+. -....+.++. .+..... ++...++.++.++...+ ++...... ...++.+..++...
T Consensus 165 ~~l~~~l~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~~~~~~~~-~~~~~~~~~~l~~~ 243 (960)
T 1wa5_C 165 LEIKLVLDVFTAPFLNLLKTVDEQITANENNKASLNILFDVLLVLIKLYYDFNCQDIPEFFEDNI-QVGMGIFHKYLSYS 243 (960)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHTH-HHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHH-HHHHHHHHHHHcCC
Confidence 2111 0112333333 2443321 22334566666664322 22111100 22345556666431
Q ss_pred ------C---------HHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhc-----CCCHHHHHHHHHHHHhcccCc
Q 010291 142 ------D---------VQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLD-----SKNGSLQHNAAFALYGLADNE 201 (513)
Q Consensus 142 ------~---------~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~-----~~~~~~~~~a~~~L~~l~~~~ 201 (513)
+ ..++..++.+|..+.......-.-.-...+...++.+. ..++.+...++..+..++..+
T Consensus 244 ~p~~~~d~d~~~~~~~~~vk~~~~~~l~~l~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~fl~~~~~~~ 323 (960)
T 1wa5_C 244 NPLLEDPDETEHASVLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLLTSISNQPKYDILVSKSLSFLTAVTRIP 323 (960)
T ss_dssp SCCCC------CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSCTTSHHHHHHHHHHHHHHHTSH
T ss_pred CCcccCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcHHHHHHHHHHHHHHhCcH
Confidence 1 24677888888877743322110001123334445443 345678888888888877543
Q ss_pred chH---------HHHHhhcCccccc--chh------------------hhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 010291 202 DNV---------ADFIRVGGVQKLQ--DGE------------------FIVQATKDCVAKTLKRLEEKIHGRVLNHLLYL 252 (513)
Q Consensus 202 ~~~---------~~~~~~g~i~~L~--~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~l 252 (513)
... ..+++.-.++.+. ... ......+.|....++.+.......+++.++..
T Consensus 324 ~~~~~~~~~~~l~~li~~~i~~~m~~~~~d~e~w~~dp~e~i~~d~e~~d~~s~R~aa~~~L~~l~~~~~~~v~~~~l~~ 403 (960)
T 1wa5_C 324 KYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDDPIEYIRRDLEGSDTDTRRRACTDFLKELKEKNEVLVTNIFLAH 403 (960)
T ss_dssp HHHGGGCSHHHHHHHHHHTHHHHHSCCGGGTTTTTTCHHHHHHHHHHC----CHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred hHHHHHcCchHHHHHHHHHhHHhcCCCHHHHHHHhcCHHHHHHhccCcccccCcHHHHHHHHHHHHHHcchhHHHHHHHH
Confidence 221 1122111111110 000 01113345555666666666555566665555
Q ss_pred H----H------HhhcchhhhHHHHHhhccCCCCcceeeecC-----CchHH----HHhhhcCC---CcchhhhHHHHHH
Q 010291 253 M----R------VAEKGVQRRVALALAHLCSPDDQRTIFIDG-----GGLEL----LLGLLGST---NPKQQLDGAVALF 310 (513)
Q Consensus 253 L----~------~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~-----~~i~~----L~~ll~~~---~~~v~~~a~~~L~ 310 (513)
+ . +.++..++.|+.+++.++........-... ...+. ++..+.++ ++-+|..|+|++.
T Consensus 404 i~~~l~~~~~~~~~~w~~reaal~algaia~~~~~~~~~~~~~~~~~~l~~~l~~~v~p~l~~~~~~~p~vr~~a~~~lg 483 (960)
T 1wa5_C 404 MKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHIILRVDAIKYIY 483 (960)
T ss_dssp HHHHHHHHHC----CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHHHHHHHHTHHHHHCSSCSCHHHHHHHHHHHH
T ss_pred HHHHHHHhccCcchhHHHHHHHHHHHHHHHHHhccccCCcccccccccHHHHHHHHhHHHhcCCCCCCceehHHHHHHHH
Confidence 4 4 345567889999999997532111100011 23333 33344555 8889999999999
Q ss_pred Hhhhc
Q 010291 311 KLANK 315 (513)
Q Consensus 311 ~l~~~ 315 (513)
.++..
T Consensus 484 ~~~~~ 488 (960)
T 1wa5_C 484 TFRNQ 488 (960)
T ss_dssp HTGGG
T ss_pred HHHhh
Confidence 98864
No 120
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=97.42 E-value=0.00014 Score=64.43 Aligned_cols=185 Identities=16% Similarity=0.137 Sum_probs=105.7
Q ss_pred HhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCCh
Q 010291 10 ELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGAL 89 (513)
Q Consensus 10 ~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i 89 (513)
.+++++++.+|..++..+ ....+..+++++++.||..++..| ..
T Consensus 57 ~ll~d~~~~VR~~AA~~l------------------~~~~l~~L~~D~~~~VR~~aA~~L------------------~~ 100 (244)
T 1lrv_A 57 QYLADPFWERRAIAVRYS------------------PVEALTPLIRDSDEVVRRAVAYRL------------------PR 100 (244)
T ss_dssp GGTTCSSHHHHHHHHTTS------------------CGGGGGGGTTCSSHHHHHHHHTTS------------------CS
T ss_pred HHhcCCCHHHHHHHHHhC------------------CHHHHHHHccCcCHHHHHHHHHHC------------------CH
Confidence 455778888888888743 123466777788888888887542 12
Q ss_pred HHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccchhhHhc
Q 010291 90 QPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQAGIAHN 169 (513)
Q Consensus 90 ~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~ 169 (513)
+.+..+++++++.|+..++..+ . .+.+..+++++++.++..++.. +.
T Consensus 101 ~~L~~ll~D~d~~VR~~aA~~l---~---------------~~~L~~L~~D~d~~VR~~aA~~---l~------------ 147 (244)
T 1lrv_A 101 EQLSALMFDEDREVRITVADRL---P---------------LEQLEQMAADRDYLVRAYVVQR---IP------------ 147 (244)
T ss_dssp GGGGGTTTCSCHHHHHHHHHHS---C---------------TGGGGGGTTCSSHHHHHHHHHH---SC------------
T ss_pred HHHHHHHcCCCHHHHHHHHHhC---C---------------HHHHHHHHcCCCHHHHHHHHHh---cC------------
Confidence 4566777788888887777632 1 1134455677778888777652 11
Q ss_pred CChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHH
Q 010291 170 GGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHL 249 (513)
Q Consensus 170 ~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L 249 (513)
.+.+..+++++++.++..++..+ .. ..+..+.+ +.....-..+...+ ..+.|
T Consensus 148 --~~~l~~l~~D~d~~VR~~aa~~l---~~-----------~ll~~ll~-----D~d~~VR~aaa~~l-------~~~~L 199 (244)
T 1lrv_A 148 --PGRLFRFMRDEDRQVRKLVAKRL---PE-----------ESLGLMTQ-----DPEPEVRRIVASRL-------RGDDL 199 (244)
T ss_dssp --GGGGGGTTTCSCHHHHHHHHHHS---CG-----------GGGGGSTT-----CSSHHHHHHHHHHC-------CGGGG
T ss_pred --HHHHHHHHcCCCHHHHHHHHHcC---CH-----------HHHHHHHc-----CCCHHHHHHHHHhC-------CHHHH
Confidence 12344556667777777666641 10 00111100 00000000011110 23445
Q ss_pred HHHHHHhhcchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcCCCcchhhhHHHHH
Q 010291 250 LYLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGSTNPKQQLDGAVAL 309 (513)
Q Consensus 250 v~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L 309 (513)
..++.++++.||..++..++ .+.|..+ .++++.|+..+...|
T Consensus 200 ~~Ll~D~d~~VR~~aa~~l~-----------------~~~L~~L-~D~~~~VR~aa~~~L 241 (244)
T 1lrv_A 200 LELLHDPDWTVRLAAVEHAS-----------------LEALREL-DEPDPEVRLAIAGRL 241 (244)
T ss_dssp GGGGGCSSHHHHHHHHHHSC-----------------HHHHHHC-CCCCHHHHHHHHCCC
T ss_pred HHHHcCCCHHHHHHHHHcCC-----------------HHHHHHc-cCCCHHHHHHHHHHh
Confidence 66677788888888887753 3556666 778888887776543
No 121
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=97.35 E-value=0.0043 Score=53.90 Aligned_cols=172 Identities=15% Similarity=0.206 Sum_probs=124.7
Q ss_pred HHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCC-----HHHHHHHHHHHHHhhc-CChhHHHHHHhCCChHHHHH
Q 010291 21 RAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSED-----SAIHYEAVGVIGNLVH-SSPNIKKEVLAAGALQPVIG 94 (513)
Q Consensus 21 ~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~-----~~v~~~a~~~L~~l~~-~~~~~~~~~~~~g~i~~L~~ 94 (513)
.+|+..|.-++. +++.+..+.+.++.-.|.++|+..+ ..+|..+++.++.+.+ ++++.-..+.+.+++|..++
T Consensus 74 cnaLaLlQcvAs-hpetr~~Fl~a~iplyLyPfL~t~sk~r~fE~LRLtsLGVIgaLvK~dd~eVi~fLL~tEiiplCLr 152 (268)
T 2fv2_A 74 CNALALLQCVAS-HPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLR 152 (268)
T ss_dssp HHHHHHHHHHHH-CTTTHHHHHHTTGGGGTHHHHHCCCCSHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHc-CcchhhHHHHccchHHhhhhhccccCCCcchhhhhhHHHHHHHHhccCcHHHHHHHHhhhHHHHHHH
Confidence 466667777786 8999999999998888888888432 5789999999999986 44566677778999999999
Q ss_pred hhcCCChHHHHHHHHHHHHhhcCCchhhHH------HHh-cCChHHHH-HHhCCCCHHHHHHHHHHHHHHhhccccchhh
Q 010291 95 LLSSCCSESQREAALLLGQFAATDSDCKVH------IVQ-RGAVRPLI-EMLQSPDVQLREMSAFALGRLAQDMHNQAGI 166 (513)
Q Consensus 95 ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~------~~~-~~~i~~L~-~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~ 166 (513)
.++.++.-.+.-|..++..+..++.+..-. +.. ..++..++ .+.+++++.+.++.+++-..|+.++..+..+
T Consensus 153 ime~GselSKtvAtfIlqKIL~dd~GL~YiC~t~eRF~av~~vL~~mV~~l~~~ps~RLLKhiircYlRLsdn~rar~aL 232 (268)
T 2fv2_A 153 IMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREAL 232 (268)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHSHHHHHHHTSSHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTSHHHHHHH
T ss_pred HHhhccHHHHHHHHHHHHHHhccchhHHHHHccHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCHHHHHHH
Confidence 999999999999999999987554332111 111 12333333 3445679999999999999999988877766
Q ss_pred Hhc-------CChHHHHHHhcCCCHHHHHHHHHHHHhc
Q 010291 167 AHN-------GGLVPLLKLLDSKNGSLQHNAAFALYGL 197 (513)
Q Consensus 167 ~~~-------~~i~~L~~ll~~~~~~~~~~a~~~L~~l 197 (513)
... |.+ ...+ .+|+..+..-...+.|+
T Consensus 233 ~~~LP~~Lrd~tf---~~~l-~~D~~~k~~l~qLl~n~ 266 (268)
T 2fv2_A 233 RQCLPDQLKDTTF---AQVL-KDDTTTKRWLAQLVKNL 266 (268)
T ss_dssp HHHSCGGGTSSTT---HHHH-TSCHHHHHHHHHHHHHS
T ss_pred HHhCcHHhhChHH---HHHH-hcCHHHHHHHHHHHHhc
Confidence 541 222 2223 35777777666666665
No 122
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=97.29 E-value=0.023 Score=50.56 Aligned_cols=178 Identities=11% Similarity=0.036 Sum_probs=122.1
Q ss_pred hHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhh----cCCCHHHHHHHHHHHHHhhcCChh--H
Q 010291 6 PPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILML----RSEDSAIHYEAVGVIGNLVHSSPN--I 79 (513)
Q Consensus 6 ~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL----~~~~~~v~~~a~~~L~~l~~~~~~--~ 79 (513)
+.+...|-+.+..-+..|+..|......+++.... .++.+++.+ .+.|..+...++.+|..+...-.. .
T Consensus 49 ~~~~~~lfs~d~k~~~~ale~L~~~l~~~~~~~~~-----~lDll~kw~~lr~~d~N~~v~~~~L~~L~~l~~~l~~~~y 123 (266)
T 2of3_A 49 VSLMSQLFHKDFKQHLAALDSLVRLADTSPRSLLS-----NSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTET 123 (266)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHHHHHHHHCHHHHHH-----THHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHhhhChHHHHH-----HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhccc
Confidence 34556666778888888988888876543332211 233334432 367888999999888887421000 0
Q ss_pred HHHHHh-CCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 010291 80 KKEVLA-AGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQ 158 (513)
Q Consensus 80 ~~~~~~-~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~ 158 (513)
+-.-.+ .-.+|.|+.-+.++...+|..+-.++..++...+.. .+.+.++.-+++.+...++.++..+..+-.
T Consensus 124 ~~~~~ea~~~lP~LveKlGd~k~~vR~~~r~il~~l~~v~~~~-------~v~~~l~~g~ksKN~R~R~e~l~~l~~li~ 196 (266)
T 2of3_A 124 PMSQEEVSAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDVVGPL-------KMTPMLLDALKSKNARQRSECLLVIEYYIT 196 (266)
T ss_dssp CCCHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHH-------HHHHHHHHGGGCSCHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHCCHH-------HHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 000001 125788899898888999988888887776432322 246678888999999999999999999875
Q ss_pred ccccchhhHhcCCh---HHHHHHhcCCCHHHHHHHHHHHHhccc
Q 010291 159 DMHNQAGIAHNGGL---VPLLKLLDSKNGSLQHNAAFALYGLAD 199 (513)
Q Consensus 159 ~~~~~~~~~~~~~i---~~L~~ll~~~~~~~~~~a~~~L~~l~~ 199 (513)
..... ...++ +.+.+++.+.|..++..|+.++..+-.
T Consensus 197 ~~G~~----~~~~l~~~~~ia~ll~D~d~~VR~aAl~~lve~y~ 236 (266)
T 2of3_A 197 NAGIS----PLKSLSVEKTVAPFVGDKDVNVRNAAINVLVACFK 236 (266)
T ss_dssp HHCSG----GGGGGCHHHHHGGGGGCSSHHHHHHHHHHHHHHHH
T ss_pred hcCCC----ccccccchHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 43322 23467 889999999999999999999986654
No 123
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=97.22 E-value=0.01 Score=62.96 Aligned_cols=181 Identities=11% Similarity=0.077 Sum_probs=122.8
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCC-CHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSE-DSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~-~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
.++.++..+.+....+|..|-.++..+...-+.... ..++|.|+..|.+. ....+..|+.++..++...+.. -.
T Consensus 96 ~~~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~a~----~~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~~~~~~~-~~ 170 (986)
T 2iw3_A 96 LVPAICTNAGNKDKEIQSVASETLISIVNAVNPVAI----KALLPHLTNAIVETNKWQEKIAILAAFSAMVDAAKDQ-VA 170 (986)
T ss_dssp THHHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGGGH----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHSHHH-HH
T ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHhCCHHHH----HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhHHH-HH
Confidence 456777777778889998888888877754222221 23588899888744 6789999999999999765432 11
Q ss_pred HHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhh---c
Q 010291 83 VLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQ---D 159 (513)
Q Consensus 83 ~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~---~ 159 (513)
..-..++|.+...+-+..++++..|..++..+|..-. +++ -...+|.|++.+.+++. . -.++..|+. .
T Consensus 171 ~~~~~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~~~-n~d---~~~~~~~~~~~~~~p~~--~---~~~~~~l~~~tfv 241 (986)
T 2iw3_A 171 LRMPELIPVLSETMWDTKKEVKAAATAAMTKATETVD-NKD---IERFIPSLIQCIADPTE--V---PETVHLLGATTFV 241 (986)
T ss_dssp HHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHGGGCC-CTT---TGGGHHHHHHHHHCTTH--H---HHHHHHHTTCCCC
T ss_pred HhccchhcchHhhcccCcHHHHHHHHHHHHHHHhcCC-Ccc---hhhhHHHHHHHhcChhh--h---HHHHHHhhcCeeE
Confidence 1223578888888888899999999999999984321 111 12579999999998854 2 344455543 2
Q ss_pred cccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhccc
Q 010291 160 MHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLAD 199 (513)
Q Consensus 160 ~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~ 199 (513)
.+....-. +=.+|.|.+-|......+++.++-++.|||.
T Consensus 242 ~~v~~~~l-~~~~p~l~r~l~~~~~~~~r~~~~~~~n~~~ 280 (986)
T 2iw3_A 242 AEVTPATL-SIMVPLLSRGLNERETGIKRKSAVIIDNMCK 280 (986)
T ss_dssp SCCCHHHH-HHHHHHHHHHHTSSSHHHHHHHHHHHHHHHT
T ss_pred eeecchhH-HHHHHHHHhhhccCcchhheeeEEEEcchhh
Confidence 22211100 0123445566777788899999999999997
No 124
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=96.93 E-value=0.063 Score=48.92 Aligned_cols=198 Identities=15% Similarity=0.178 Sum_probs=144.1
Q ss_pred CChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHH----HHHhcCCHHHHHHhhc-CCCHHHHHHHHHHHHHhhcCCh
Q 010291 3 GGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKN----QIVECNALPTLILMLR-SEDSAIHYEAVGVIGNLVHSSP 77 (513)
Q Consensus 3 g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~----~i~~~g~i~~Lv~lL~-~~~~~v~~~a~~~L~~l~~~~~ 77 (513)
+.+..|+..|..=+-+.|..+..+..++.+...+.+. .+.. --..+.-++. -+++++-..+-..|+....+ +
T Consensus 78 dll~~Li~~l~~L~fE~RKd~~~if~~llr~~~~~~~p~v~Yl~~--~peil~~L~~gYe~~diAl~~G~mLRecir~-e 154 (341)
T 1upk_A 78 GLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICT--QQNILFMLLKGYESPEIALNCGIMLRECIRH-E 154 (341)
T ss_dssp SHHHHHHHTGGGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHT--CTHHHHHHHHGGGSTTTHHHHHHHHHHHHTS-H
T ss_pred CHHHHHHHhcccCCchhhccHHHHHHHHHhcccCCCCchhHHHHc--CHHHHHHHHHhhccchhHhHHHHHHHHHHHh-H
Confidence 4556677777777888899999988888875443322 2222 1222222333 24566666666677777765 7
Q ss_pred hHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHh---cCChHHHHHHhCCCCHHHHHHHHHHHH
Q 010291 78 NIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQ---RGAVRPLIEMLQSPDVQLREMSAFALG 154 (513)
Q Consensus 78 ~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~---~~~i~~L~~~l~~~~~~~~~~a~~~L~ 154 (513)
...+.+...+.+-.+.+.+..++.++...|..++..+-............ ..+....-+++.+++--++..++..|+
T Consensus 155 ~la~~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefL~~nyd~Ff~~y~~Ll~S~NYVTkRQSlKLLg 234 (341)
T 1upk_A 155 PLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLG 234 (341)
T ss_dssp HHHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhccHHHHHHHHHHhHHHHHHHHHHHhcCCcchhHHHHHHHHH
Confidence 77778888888888999999999999999999999887554443333333 235667778999999999999999999
Q ss_pred HHhhccccchhh----HhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcch
Q 010291 155 RLAQDMHNQAGI----AHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDN 203 (513)
Q Consensus 155 ~l~~~~~~~~~~----~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~ 203 (513)
.+-.+..+...+ .+...+..++.+|++++..++..|..+.--+..++..
T Consensus 235 elLldr~N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVANP~K 287 (341)
T 1upk_A 235 ELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNK 287 (341)
T ss_dssp HHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCSSC
T ss_pred HHHhCchHHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeeeCCCC
Confidence 999887775433 3456688899999999999999999988877776654
No 125
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=96.90 E-value=0.032 Score=60.65 Aligned_cols=255 Identities=9% Similarity=0.067 Sum_probs=140.8
Q ss_pred HHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhc------CCCHHHHHHHHHHHHHhhcCChhHHHHHHhC-----
Q 010291 18 KVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLR------SEDSAIHYEAVGVIGNLVHSSPNIKKEVLAA----- 86 (513)
Q Consensus 18 ~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~------~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~----- 86 (513)
..|..|...|..++...+ ..+.. .+++.+.+.+. +++...++.|+.+++.++.+...... ....
T Consensus 376 s~R~aa~~~L~~l~~~~~---~~v~~-~~l~~i~~~l~~~~~~~~~~w~~reaal~algaia~~~~~~~~-~~~~~~~~~ 450 (960)
T 1wa5_C 376 TRRRACTDFLKELKEKNE---VLVTN-IFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNA-GVSSTNNLL 450 (960)
T ss_dssp CHHHHHHHHHHHHHHHCH---HHHHH-HHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHBSSCCBTT-BCCCBCTTC
T ss_pred CcHHHHHHHHHHHHHHcc---hhHHH-HHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHhccccC-Ccccccccc
Confidence 456677778888876422 12211 12333334444 45667899999999999853211000 0000
Q ss_pred CChH----HHHHhhcCC---ChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhc
Q 010291 87 GALQ----PVIGLLSSC---CSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 87 g~i~----~L~~ll~~~---~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~ 159 (513)
...+ .++..+.++ ++-+|..++|+++.++..-+. .. -..+++.++..+.++++.++..|+++|.+++..
T Consensus 451 ~l~~~l~~~v~p~l~~~~~~~p~vr~~a~~~lg~~~~~~~~--~~--l~~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~ 526 (960)
T 1wa5_C 451 NVVDFFTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQLTK--AQ--LIELMPILATFLQTDEYVVYTYAAITIEKILTI 526 (960)
T ss_dssp CHHHHHHHHTHHHHHCSSCSCHHHHHHHHHHHHHTGGGSCH--HH--HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHhHHHhcCCCCCCceehHHHHHHHHHHHhhCCH--HH--HHHHHHHHHHHhCCCChhHHHHHHHHHHHHHhc
Confidence 1112 233334555 789999999999999864321 11 234678888999988999999999999999874
Q ss_pred cc---------cchhhHh--cCChHHHHHHhcCCC---HH--HHHHHHHHHHhcccC--cchHHHHHhhcCcccccchhh
Q 010291 160 MH---------NQAGIAH--NGGLVPLLKLLDSKN---GS--LQHNAAFALYGLADN--EDNVADFIRVGGVQKLQDGEF 221 (513)
Q Consensus 160 ~~---------~~~~~~~--~~~i~~L~~ll~~~~---~~--~~~~a~~~L~~l~~~--~~~~~~~~~~g~i~~L~~~~~ 221 (513)
.. .+..+.. ...++.|+.++.... .+ ....+..+|..++.. ++...
T Consensus 527 ~~~~~~~~~~~~~~~l~p~l~~ll~~L~~ll~~~~~~~~~~~~~e~l~~al~~vv~~~~~~~~p---------------- 590 (960)
T 1wa5_C 527 RESNTSPAFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQP---------------- 590 (960)
T ss_dssp BSCSSSCCBSSCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTTTTGG----------------
T ss_pred ccccccccccccHHHhhhhHHHHHHHHHHHHHhccCCCCcccccHHHHHHHHHHHHHHHHhhhh----------------
Confidence 22 1222211 233445666666541 11 123445555544321 11100
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHH-----hhcchhhhHHHHHhhccCC-CCcceeeecCCchHHHHhhhc
Q 010291 222 IVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRV-----AEKGVQRRVALALAHLCSP-DDQRTIFIDGGGLELLLGLLG 295 (513)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~-----~~~~v~~~a~~aL~~l~~~-~~~~~~l~~~~~i~~L~~ll~ 295 (513)
+-..+++.|...+.. .++..+..+..+|+.++.. ......-.....+|.+...+.
T Consensus 591 -------------------~~~~l~~~L~~~l~~~~~~~~~~~~~~~~~e~l~~l~~~~~~~~~~~~~~~~~p~~~~iL~ 651 (960)
T 1wa5_C 591 -------------------LFPQLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFS 651 (960)
T ss_dssp -------------------GHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHH
T ss_pred -------------------HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHH
Confidence 011234444444443 2344555667777777653 111112223345688888887
Q ss_pred CCCcchhhhHHHHHHHhhhcc
Q 010291 296 STNPKQQLDGAVALFKLANKA 316 (513)
Q Consensus 296 ~~~~~v~~~a~~~L~~l~~~~ 316 (513)
....+....+...+..+....
T Consensus 652 ~~~~~~~~~~~~i~~~l~~~~ 672 (960)
T 1wa5_C 652 EDIQEFIPYVFQIIAFVVEQS 672 (960)
T ss_dssp TTCTTTHHHHHHHHHHHHHHC
T ss_pred hhhHhhHHHHHHHHHHHHHhc
Confidence 766677777777777776553
No 126
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=96.86 E-value=0.0093 Score=54.32 Aligned_cols=204 Identities=12% Similarity=0.123 Sum_probs=151.1
Q ss_pred HHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhh----HHHHh-cCChHHHHHHhCCCCHHHHHHHHHHHHH
Q 010291 81 KEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCK----VHIVQ-RGAVRPLIEMLQSPDVQLREMSAFALGR 155 (513)
Q Consensus 81 ~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~----~~~~~-~~~i~~L~~~l~~~~~~~~~~a~~~L~~ 155 (513)
+.+...+.+..|+..+..-+.+.+..++.+..++.+...+.+ ..+.. ..++..|+..- +++++.-.+-..|+.
T Consensus 72 ~ei~~~dll~~Li~~l~~L~fE~RKd~~~if~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY--e~~diAl~~G~mLRe 149 (341)
T 1upk_A 72 QELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGY--ESPEIALNCGIMLRE 149 (341)
T ss_dssp HHHHHHSHHHHHHHTGGGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGG--GSTTTHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHhcccCCchhhccHHHHHHHHHhcccCCCCchhHHHHcCHHHHHHHHHhh--ccchhHhHHHHHHHH
Confidence 345566888899999999999999999999999987654432 22322 22333333333 355677788888999
Q ss_pred HhhccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcc-cCcchHHHHHhhcCcccccchhhhhhhhHHHHHHHH
Q 010291 156 LAQDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLA-DNEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTL 234 (513)
Q Consensus 156 l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~-~~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~ 234 (513)
+.++....+.+...+.+..+.+++..++-++...|..++..+- .+.....+++...
T Consensus 150 cir~e~la~~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefL~~n----------------------- 206 (341)
T 1upk_A 150 CIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQH----------------------- 206 (341)
T ss_dssp HHTSHHHHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHT-----------------------
T ss_pred HHHhHHHHHHHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhccHHHHHHHHHHh-----------------------
Confidence 9888888888888888999999999999999888888887664 3544444443321
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcc----eeeecCCchHHHHhhhcCCCcchhhhHHHHHH
Q 010291 235 KRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQR----TIFIDGGGLELLLGLLGSTNPKQQLDGAVALF 310 (513)
Q Consensus 235 ~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~----~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~ 310 (513)
+ ..+....-.+|.+++.-.+..++..|+.+-.+..+. +.+.+..-+..++.+|.+++..+|.+|-.+..
T Consensus 207 ------y-d~Ff~~y~~Ll~S~NYVTkRQSlKLLgelLldr~N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFK 279 (341)
T 1upk_A 207 ------Y-DRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFK 279 (341)
T ss_dssp ------H-HHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred ------H-HHHHHHHHHHhcCCcchhHHHHHHHHHHHHhCchHHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhhee
Confidence 1 236677778899999999999999999997665532 34444455788999999999999999998888
Q ss_pred Hhhhcc
Q 010291 311 KLANKA 316 (513)
Q Consensus 311 ~l~~~~ 316 (513)
-+..++
T Consensus 280 vFVANP 285 (341)
T 1upk_A 280 VFVANP 285 (341)
T ss_dssp HHHHCS
T ss_pred eeeeCC
Confidence 777653
No 127
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=96.76 E-value=0.023 Score=49.40 Aligned_cols=192 Identities=13% Similarity=0.127 Sum_probs=135.5
Q ss_pred CHHHHHHHHHHHHHhhccCchhHHHHHh-cCCHHHHHH-------hhcCCC-----HHHHHHHHHHHHHhhcCChhHHHH
Q 010291 16 DTKVQRAAAGALRTLAFKNDENKNQIVE-CNALPTLIL-------MLRSED-----SAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 16 ~~~~~~~a~~~L~~l~~~~~~~~~~i~~-~g~i~~Lv~-------lL~~~~-----~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
+++.|+.|+..|+.--...++....+-. .|.+..|++ .+..+. ..-...|+..|..+|.+ ++.|..
T Consensus 14 ~p~~Re~AL~eLsk~Re~~~~La~~LW~S~Gtia~LLQEIisiYp~lspp~Lt~~~SnRVcnaLaLlQcvAsh-petr~~ 92 (268)
T 2fv2_A 14 SPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASH-PETRSA 92 (268)
T ss_dssp STTTHHHHHHHHHHHTTTCTTHHHHHHHSTTHHHHHHHHHHHTGGGBTTBCCCHHHHHHHHHHHHHHHHHHHC-TTTHHH
T ss_pred CchhHHHHHHHHHHhhhccccHHHHHHhccCHHHHHHHHHHHHcccCCCcccCHHHHhHHHHHHHHHHHHHcC-cchhhH
Confidence 4556888887777655544454444444 466666654 222111 12234566666777765 888999
Q ss_pred HHhCCChHHHHHhhcCCC-----hHHHHHHHHHHHHhhc-CCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHH
Q 010291 83 VLAAGALQPVIGLLSSCC-----SESQREAALLLGQFAA-TDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRL 156 (513)
Q Consensus 83 ~~~~g~i~~L~~ll~~~~-----~~~~~~a~~~L~~l~~-~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l 156 (513)
+++.++.-.|..+|+..+ +.+|-.+.++++.+.. ++++....+.+.+++|..++.++.++.-.+..|..++..+
T Consensus 93 Fl~a~iplyLyPfL~t~sk~r~fE~LRLtsLGVIgaLvK~dd~eVi~fLL~tEiiplCLrime~GselSKtvAtfIlqKI 172 (268)
T 2fv2_A 93 FLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKI 172 (268)
T ss_dssp HHHTTGGGGTHHHHHCCCCSHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHccchHHhhhhhccccCCCcchhhhhhHHHHHHHHhccCcHHHHHHHHhhhHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 999999999999988643 4678888888888873 4556667778899999999999999999999999999999
Q ss_pred hhccccchhhHh--------cCChHH-HHHHhcCCCHHHHHHHHHHHHhcccCcchHHHHH
Q 010291 157 AQDMHNQAGIAH--------NGGLVP-LLKLLDSKNGSLQHNAAFALYGLADNEDNVADFI 208 (513)
Q Consensus 157 ~~~~~~~~~~~~--------~~~i~~-L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~ 208 (513)
-.++.+-..+.. ...+.. +..+..++++.+..+.+++-..|+.++..+..+.
T Consensus 173 L~dd~GL~YiC~t~eRF~av~~vL~~mV~~l~~~ps~RLLKhiircYlRLsdn~rar~aL~ 233 (268)
T 2fv2_A 173 LLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALR 233 (268)
T ss_dssp HHSHHHHHHHTSSHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred hccchhHHHHHccHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 877766443322 112222 2344567889999999999999999887766554
No 128
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=96.68 E-value=0.093 Score=47.61 Aligned_cols=189 Identities=14% Similarity=0.073 Sum_probs=124.5
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHhhcCChhHH--HHHH-h-CCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCc-----h
Q 010291 50 LILMLRSEDSAIHYEAVGVIGNLVHSSPNIK--KEVL-A-AGALQPVIGLLSSCCSESQREAALLLGQFAATDS-----D 120 (513)
Q Consensus 50 Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~--~~~~-~-~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~-----~ 120 (513)
+-+-|.+.+...|..|+..|..+....+... .... . ....+.+...+.+.+..+...++.++..++.... .
T Consensus 14 l~e~l~sk~WK~R~eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~l~DsN~~v~~~al~~l~~~~~~~~~~~~~~ 93 (278)
T 4ffb_C 14 LEERLTYKLWKARLEAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQYITDSNVVAQEQAIVALNSLIDAFASSSLKN 93 (278)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHHHTC----------CCTTSCTHHHHHHTTCSSHHHHHHHHHHHHHHHTTCC---CCH
T ss_pred HHHhcccCcHHHHHHHHHHHHHHHhhCcccccchhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhccc
Confidence 5677889999999999999988876543221 1111 1 1345667778888999999999999998874321 1
Q ss_pred hhHHHHhcCChHHHHHH-hCCCCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhccc
Q 010291 121 CKVHIVQRGAVRPLIEM-LQSPDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLAD 199 (513)
Q Consensus 121 ~~~~~~~~~~i~~L~~~-l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~ 199 (513)
......-..+++.|+.- +.+..+.++..+..++..++........ .+..+...+.+.++.++..++..|..+..
T Consensus 94 ~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~~~-----~~e~l~~~l~~Knpkv~~~~l~~l~~~l~ 168 (278)
T 4ffb_C 94 AHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSITQ-----SVELVIPFFEKKLPKLIAAAANCVYELMA 168 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSSHH-----HHHHHGGGGGCSCHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcHHH-----HHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 11122234567777754 7888899999999988887753332222 23456677889999999998888887653
Q ss_pred CcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcchhhhHHHHHhhccC
Q 010291 200 NEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKGVQRRVALALAHLCS 273 (513)
Q Consensus 200 ~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~ 273 (513)
.-.. ..++. ...-..+++.+..++.+.++.||..|..++..+..
T Consensus 169 ~fg~-------~~~~~-----------------------k~~l~~i~~~l~k~l~d~~~~VR~aA~~l~~~ly~ 212 (278)
T 4ffb_C 169 AFGL-------TNVNV-----------------------QTFLPELLKHVPQLAGHGDRNVRSQTMNLIVEIYK 212 (278)
T ss_dssp HHTT-------TTCCH-----------------------HHHHHHHGGGHHHHHTCSSHHHHHHHHHHHHHHHT
T ss_pred HhCC-------CcCCc-----------------------hhHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 1000 00000 00011356677888999999999999999988754
No 129
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=96.61 E-value=0.038 Score=49.24 Aligned_cols=181 Identities=8% Similarity=-0.039 Sum_probs=117.0
Q ss_pred HHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccc-hhhH-
Q 010291 90 QPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQ-AGIA- 167 (513)
Q Consensus 90 ~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~-~~~~- 167 (513)
+.+...+-+.+..-+..++..|......+++......+ .+++++.-.+.+.+..+...++.+|..+...-..+ ..+.
T Consensus 49 ~~~~~~lfs~d~k~~~~ale~L~~~l~~~~~~~~~~lD-ll~kw~~lr~~d~N~~v~~~~L~~L~~l~~~l~~~~y~~~~ 127 (266)
T 2of3_A 49 VSLMSQLFHKDFKQHLAALDSLVRLADTSPRSLLSNSD-LLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQ 127 (266)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHHHHHHHHCHHHHHHTHH-HHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCCH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHhhhChHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhccccchH
Confidence 34455555667777777777777765443332211111 13444444455789899888888888875321111 1111
Q ss_pred -h-cCChHHHHHHhcCCCHHHHHHHHHHHHhccc-CcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhh
Q 010291 168 -H-NGGLVPLLKLLDSKNGSLQHNAAFALYGLAD-NEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGR 244 (513)
Q Consensus 168 -~-~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~-~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (513)
+ .-.+|.|+.-+.+..+.++..+-.++..++. .+ ...
T Consensus 128 ~ea~~~lP~LveKlGd~k~~vR~~~r~il~~l~~v~~----------------------------------------~~~ 167 (266)
T 2of3_A 128 EEVSAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDVVG----------------------------------------PLK 167 (266)
T ss_dssp HHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHC----------------------------------------HHH
T ss_pred HHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHCC----------------------------------------HHH
Confidence 1 2356778888888888888887777766653 11 122
Q ss_pred hHHHHHHHHHHhhcchhhhHHHHHhhccCCCCcceeeecCCch---HHHHhhhcCCCcchhhhHHHHHHHhhhc
Q 010291 245 VLNHLLYLMRVAEKGVQRRVALALAHLCSPDDQRTIFIDGGGL---ELLLGLLGSTNPKQQLDGAVALFKLANK 315 (513)
Q Consensus 245 ~l~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i---~~L~~ll~~~~~~v~~~a~~~L~~l~~~ 315 (513)
+.+.++.-+++.++..|..++..+..+....... ...++ +.+..++.+.+..+|..|..++..+-.+
T Consensus 168 v~~~l~~g~ksKN~R~R~e~l~~l~~li~~~G~~----~~~~l~~~~~ia~ll~D~d~~VR~aAl~~lve~y~~ 237 (266)
T 2of3_A 168 MTPMLLDALKSKNARQRSECLLVIEYYITNAGIS----PLKSLSVEKTVAPFVGDKDVNVRNAAINVLVACFKF 237 (266)
T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHCSG----GGGGGCHHHHHGGGGGCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCCC----ccccccchHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 5666777778888888999988888875321111 23468 9999999999999999999988876554
No 130
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=96.29 E-value=0.00072 Score=51.84 Aligned_cols=95 Identities=14% Similarity=0.146 Sum_probs=68.0
Q ss_pred cEEEEecCeeehhhHHHHhhcC-HHHHHhccCCC-CCCCCCceecCCCCHHHHHHHHHHHhcCccccCHH-HHHHHHHHH
Q 010291 347 DVTFLVEGRRFYAHRICLLASS-DAFRAMFDGGY-REKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLD-IAQDLLRAA 423 (513)
Q Consensus 347 Dv~~~~~~~~~~~h~~il~~~s-~~f~~~~~~~~-~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~-~~~~ll~~A 423 (513)
-|.+.|||..|...+..|.... .++.+|+++.. .....+.+-+ |=++..|..+|+|+.+|.+.++.+ ....+++-|
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea 84 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEEEL 84 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHH
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCcccHHHHHHHH
Confidence 4788999999999999998663 34556665421 1123345555 458999999999999999977653 367899999
Q ss_pred HHhcHHHHHH--HHHHHHHhc
Q 010291 424 DQYLLEGLKR--LCEYTIAQD 442 (513)
Q Consensus 424 ~~~~~~~l~~--~c~~~l~~~ 442 (513)
++|+++...- -|...+.+.
T Consensus 85 ~fy~i~~~~l~~CC~~~~~~~ 105 (115)
T 3kvt_A 85 EFWGLDSNQVEPCCWMTYTAH 105 (115)
T ss_dssp HHHTCCGGGBCGGGSHHHHSC
T ss_pred HHhCCChHHHHHHHHHHHHhc
Confidence 9999987542 255554443
No 131
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=96.17 E-value=0.0056 Score=47.56 Aligned_cols=91 Identities=18% Similarity=0.185 Sum_probs=65.1
Q ss_pred ccEEEEecCeeehhhHHHHhhcCHHHHHhccCC----CCCCCCCceecCCCCHHHHHHHHHHHhcCccccCHH-HHHHHH
Q 010291 346 SDVTFLVEGRRFYAHRICLLASSDAFRAMFDGG----YREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLD-IAQDLL 420 (513)
Q Consensus 346 ~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~----~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~-~~~~ll 420 (513)
.-|.+.|||..|...+..|.... ..||... +.....+.+-++ =++..|+.+|+|+-+|.+.++.+ .+..++
T Consensus 13 ~~V~LNVGG~~F~t~~~TL~~~p---~S~L~~~~~~~~~~~~~g~~FiD-Rdp~~F~~ILnflR~G~l~~p~~~~~~~l~ 88 (124)
T 1s1g_A 13 ELIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFFD-RDPEVFRCVLNFYRTGKLHYPRYECISAYD 88 (124)
T ss_dssp CEEEEEETTEEEEEEHHHHTTST---TSSTTSSGGGGTBCSSSCSEEEC-SCHHHHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred CEEEEEeCCEEEEEeHHHHhcCC---CceecccCCcccccCCCCcEEEc-CChHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 45888999999999999997542 2344321 111233455554 49999999999999999987654 478899
Q ss_pred HHHHHhcHHHHH--HHHHHHHH
Q 010291 421 RAADQYLLEGLK--RLCEYTIA 440 (513)
Q Consensus 421 ~~A~~~~~~~l~--~~c~~~l~ 440 (513)
+-|++|+++.+. ..|.....
T Consensus 89 ~Ea~fy~i~~l~l~~cC~~~~~ 110 (124)
T 1s1g_A 89 DELAFYGILPEIIGDCCYEEYK 110 (124)
T ss_dssp HHHHHTTCCGGGBCHHHHHHHH
T ss_pred HHHHHcCCChHHHHHHHHHHHH
Confidence 999999999873 34444443
No 132
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=95.99 E-value=0.11 Score=44.86 Aligned_cols=138 Identities=16% Similarity=0.102 Sum_probs=96.5
Q ss_pred HhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHH-hhcCCChHHHHHHHHHHHHhhc-CCchhhHHHHhcC
Q 010291 52 LMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIG-LLSSCCSESQREAALLLGQFAA-TDSDCKVHIVQRG 129 (513)
Q Consensus 52 ~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~-ll~~~~~~~~~~a~~~L~~l~~-~~~~~~~~~~~~~ 129 (513)
.+..++..++|..|+.+|+.+ ...+ ..++.+.. +..+....|++.++.++..++. .+++ .
T Consensus 78 ~L~~~~~deVR~~Av~lLg~~-~~~~---------~~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~pe--------~ 139 (240)
T 3l9t_A 78 LAYQSDVYQVRMYAVFLFGYL-SKDK---------EILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEYK--------K 139 (240)
T ss_dssp HHHTCSSHHHHHHHHHHHHHT-TTSH---------HHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCTT--------T
T ss_pred HHHhCcchHHHHHHHHHHHhc-cCcH---------HHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHH--------H
Confidence 444567789999999998888 3211 14566665 5567789999999999999984 4444 2
Q ss_pred ChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhccc-CcchHHHHH
Q 010291 130 AVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLAD-NEDNVADFI 208 (513)
Q Consensus 130 ~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~-~~~~~~~~~ 208 (513)
.++.+....++++..+|..|...+.--+.....+ .--.-.++.|-.+..+++.-|+....+.|..++. +++....++
T Consensus 140 ~l~~~~~W~~d~n~~VRR~Ase~~rpW~~~~~~k--~dp~~ll~iL~~L~~D~s~yVrKSVan~LrD~SK~~Pd~V~~~~ 217 (240)
T 3l9t_A 140 ALPIIDEWLKSSNLHTRRAATEGLRIWTNRPYFK--ENPNEAIRRIADLKEDVSEYVRKSVGNALRDISKKFPDLVKIEL 217 (240)
T ss_dssp THHHHHHHHHCSSHHHHHHHHHHTCSGGGSTTTT--TCHHHHHHHHHTTTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHhhHHHhccchhh--cCHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhCHHHHHHHH
Confidence 5678889999999999999998876544321111 0001234445556667788899999999999998 666666655
Q ss_pred h
Q 010291 209 R 209 (513)
Q Consensus 209 ~ 209 (513)
+
T Consensus 218 ~ 218 (240)
T 3l9t_A 218 K 218 (240)
T ss_dssp H
T ss_pred H
Confidence 4
No 133
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=95.83 E-value=0.25 Score=47.32 Aligned_cols=123 Identities=18% Similarity=0.128 Sum_probs=94.5
Q ss_pred CCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHH
Q 010291 15 TDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIG 94 (513)
Q Consensus 15 ~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ 94 (513)
+++..+.-|+..|......-|+.... ++..++.++.+++..+|..|++.|..+|.+ +.. .. +...|++
T Consensus 40 g~~k~K~LaaQ~I~kffk~FP~l~~~-----Ai~a~lDLcEDed~~IR~qaik~Lp~~ck~-~~i-~k-----iaDvL~Q 107 (507)
T 3u0r_A 40 GGTKEKRLAAQFIPKFFKHFPELADS-----AINAQLDLCEDEDVSIRRQAIKELPQFATG-ENL-PR-----VADILTQ 107 (507)
T ss_dssp SCHHHHHHHHHHHHHHGGGCGGGHHH-----HHHHHHHHHTCSSHHHHHHHHHHGGGGCCT-TCH-HH-----HHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhChhhHHH-----HHHHHHHHHhcccHHHHHHHHHhhHHHhhh-hhh-hh-----HHHHHHH
Confidence 56888888999898888877776655 477899999999999999999999999987 332 22 4678899
Q ss_pred hhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 010291 95 LLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLA 157 (513)
Q Consensus 95 ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~ 157 (513)
+|.++++.-....-.+|..+...++. +.+..+...+..+++.+|+.++..|..=.
T Consensus 108 lLqtdd~~E~~~V~~sL~sllk~Dpk--------~tl~~lf~~i~~~~e~~Rer~lkFi~~kl 162 (507)
T 3u0r_A 108 LLQTDDSAEFNLVNNALLSIFKMDAK--------GTLGGLFSQILQGEDIVRERAIKFLSTKL 162 (507)
T ss_dssp HTTCCCHHHHHHHHHHHHHHHHHCHH--------HHHHHHHHHHHHSCHHHHHHHHHHHHHHG
T ss_pred HHhccchHHHHHHHHHHHHHHhcChH--------HHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence 99988887777777888888765554 34556666666677888888777775543
No 134
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=95.73 E-value=0.057 Score=58.75 Aligned_cols=134 Identities=13% Similarity=0.069 Sum_probs=85.2
Q ss_pred CCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhh---c--CCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCCh
Q 010291 15 TDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILML---R--SEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGAL 89 (513)
Q Consensus 15 ~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL---~--~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i 89 (513)
.++..++.|+.+++.++.+-..... ..++.+++++ . ++++.+|..++++++.++..-....+.+ ..++
T Consensus 476 ~~w~~~eaal~~l~~iae~~~~~~~-----~~l~~l~~~l~~l~~~d~~~~vr~~a~~~l~~~~~~l~~~~~~l--~~vl 548 (971)
T 2x1g_F 476 THWTKLEACIYSFQSVAEHFGGEEK-----RQIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWLMENPAYI--PPAI 548 (971)
T ss_dssp TCCHHHHHHHHHHHHTTTC-----------CHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTHHHHC----CH--HHHH
T ss_pred CcHHHHHHHHHHHHHHHhhcChhhh-----HHHHHHHHHHHhcCccccCHHHHHHHHHHHHHHHHHHhcCHHHH--HHHH
Confidence 5778899999999999876332211 2233344333 3 3489999999999999985321111111 1245
Q ss_pred HHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCC--CHHHHHHHHHHHHHHhhc
Q 010291 90 QPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSP--DVQLREMSAFALGRLAQD 159 (513)
Q Consensus 90 ~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~--~~~~~~~a~~~L~~l~~~ 159 (513)
+.++..++ +.++..|++++.+++........ -.-..++..+..++..+ +...+..+..+++.++..
T Consensus 549 ~~l~~~l~---~~v~~~A~~al~~l~~~~~~~l~-p~~~~ll~~l~~~l~~~~~~~~~~~~~~~ai~~i~~~ 616 (971)
T 2x1g_F 549 NLLVRGLN---SSMSAQATLGLKELCRDCQLQLK-PYADPLLNACHASLNTGRMKNSDSVRLMFSIGKLMSL 616 (971)
T ss_dssp HHHHHHHH---SSCHHHHHHHHHHHHHHCHHHHH-HHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhC---hHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHh
Confidence 66666662 78999999999999954332211 11234566667777763 678889999999998854
No 135
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}
Probab=95.73 E-value=0.071 Score=51.95 Aligned_cols=214 Identities=16% Similarity=0.090 Sum_probs=125.7
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhC--CChHHHHHhhc---------C-CChHHHHHHHHHHHHh
Q 010291 47 LPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAA--GALQPVIGLLS---------S-CCSESQREAALLLGQF 114 (513)
Q Consensus 47 i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~--g~i~~L~~ll~---------~-~~~~~~~~a~~~L~~l 114 (513)
...|+.-|-++..++|-.|+.+|+.+.............. ...-.++.++. + --..||+.|+.+|+.+
T Consensus 176 cE~L~~DLFdp~WEiRHGAALGLREILR~hG~GAGR~~~~N~DLAvRLLCVLALDRFGDYVSDqVVAPVRETaAQtLGaL 255 (800)
T 3oc3_A 176 FEQISDNLLSYEWYKRHGAFLAFAAMFSEIDNGGDIQIRVDSKLFSKIYEILVTDKFNDFVDDRTVAPVRDAAAYLLSRI 255 (800)
T ss_dssp THHHHHHTTCSSHHHHHHHHHHHHHHHHHCC----CCCCCCTTHHHHHHHHHHHBCCBBCSSSSCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcchhhhhHHHHHHHHHHHHhccCCceeccccHHHHHHHHHHHHhccccccccCeeeeehHHHHHHHHHHH
Confidence 4556666668899999999999999875422110000011 11222222221 1 1258999999999998
Q ss_pred hcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHH
Q 010291 115 AATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFAL 194 (513)
Q Consensus 115 ~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L 194 (513)
..-+.. ..++..++..+..+.=+++..++-.|..+. +--.. -.+.++.++..|.+.+++++..|+.+|
T Consensus 256 -~hLp~e------~~IL~qLV~~l~~~~WEVRHGGLLGLKYL~---DLL~~--Ld~Vv~aVL~GL~D~DDDVRAVAAetL 323 (800)
T 3oc3_A 256 -YPLIGP------NDIIEQLVGFLDSGDWQVQFSGLIALGYLK---EFVED--KDGLCRKLVSLLSSPDEDIKLLSAELL 323 (800)
T ss_dssp -TTTSCS------CCHHHHHTTGGGCSCHHHHHHHHHHHHHTG---GGCCC--HHHHHHHHHHHTTCSSHHHHHHHHHHH
T ss_pred -HhCChh------HHHHHHHHhhcCCCCeeehhhhHHHHHHHH---HHHHH--HHHHHHHHHhhcCCcccHHHHHHHHHh
Confidence 554443 234444555556667789999999999881 11111 245677788889999999999999999
Q ss_pred HhcccCcchHHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh-hcch-hhhHHHHHhhcc
Q 010291 195 YGLADNEDNVADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVA-EKGV-QRRVALALAHLC 272 (513)
Q Consensus 195 ~~l~~~~~~~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~~-~~~v-~~~a~~aL~~l~ 272 (513)
.-++ .++....+ +..+-..|.+- |-.. .......|+.|+
T Consensus 324 iPIA-~p~~l~~L--------------------------------------L~iLWd~L~~LDDLSASTgSVMdLLAkL~ 364 (800)
T 3oc3_A 324 CHFP-ITDSLDLV--------------------------------------LEKCWKNIESEELISVSKTSNLSLLTKIY 364 (800)
T ss_dssp TTSC-CSSTHHHH--------------------------------------HHHHHHHHHTCCSCCTTHHHHHHHHHHHH
T ss_pred hhhc-chhhHHHH--------------------------------------HHHHHHHhhhhcccchhhHHHHHHHHHHH
Confidence 9998 33322222 22222233321 1000 111122333333
Q ss_pred CCCCcceeeecCCchHHHHhhhcCCCcchhhhHHHHHHHhh
Q 010291 273 SPDDQRTIFIDGGGLELLLGLLGSTNPKQQLDGAVALFKLA 313 (513)
Q Consensus 273 ~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~ 313 (513)
..+... -.....+|.|..++.++-+.||..+..++..+.
T Consensus 365 s~p~~a--~~dp~LVPRL~PFLRHtITSVR~AVL~TL~tfL 403 (800)
T 3oc3_A 365 RENPEL--SIPPERLKDIFPCFTSPVPEVRTSILNMVKNLS 403 (800)
T ss_dssp HHCTTC--CCCSGGGGGTGGGGTCSSHHHHHHHHHHTTTCC
T ss_pred cCCccc--ccChHHHHHHHhhhcCCcHHHHHHHHHHHHHHH
Confidence 222111 112378999999999999999998888776553
No 136
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=95.62 E-value=0.016 Score=51.16 Aligned_cols=85 Identities=20% Similarity=0.178 Sum_probs=45.6
Q ss_pred HHHhhccCCHHHHHHHHHHH-----HHhhcc-CchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHH
Q 010291 8 LVELLEFTDTKVQRAAAGAL-----RTLAFK-NDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 81 (513)
Q Consensus 8 Lv~lL~~~~~~~~~~a~~~L-----~~l~~~-~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 81 (513)
+..+++++++.+|..++..| ..+..+ +...+......-..+.+..+++++++.||..++.. +.
T Consensus 79 l~~L~~D~~~~VR~~aA~~L~~~~L~~ll~D~d~~VR~~aA~~l~~~~L~~L~~D~d~~VR~~aA~~---l~-------- 147 (244)
T 1lrv_A 79 LTPLIRDSDEVVRRAVAYRLPREQLSALMFDEDREVRITVADRLPLEQLEQMAADRDYLVRAYVVQR---IP-------- 147 (244)
T ss_dssp GGGGTTCSSHHHHHHHHTTSCSGGGGGTTTCSCHHHHHHHHHHSCTGGGGGGTTCSSHHHHHHHHHH---SC--------
T ss_pred HHHHccCcCHHHHHHHHHHCCHHHHHHHHcCCCHHHHHHHHHhCCHHHHHHHHcCCCHHHHHHHHHh---cC--------
Confidence 44455666666666665432 111211 22233333322223456667778889999988763 11
Q ss_pred HHHhCCChHHHHHhhcCCChHHHHHHHHH
Q 010291 82 EVLAAGALQPVIGLLSSCCSESQREAALL 110 (513)
Q Consensus 82 ~~~~~g~i~~L~~ll~~~~~~~~~~a~~~ 110 (513)
.+.+..+++++++.|+..++..
T Consensus 148 -------~~~l~~l~~D~d~~VR~~aa~~ 169 (244)
T 1lrv_A 148 -------PGRLFRFMRDEDRQVRKLVAKR 169 (244)
T ss_dssp -------GGGGGGTTTCSCHHHHHHHHHH
T ss_pred -------HHHHHHHHcCCCHHHHHHHHHc
Confidence 2234456667777777766653
No 137
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=95.60 E-value=0.16 Score=55.21 Aligned_cols=131 Identities=11% Similarity=0.072 Sum_probs=81.5
Q ss_pred CCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhh---c--CCChHHHHHHHHHHHHhhcCCchhhHHHHhcCCh
Q 010291 57 EDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLL---S--SCCSESQREAALLLGQFAATDSDCKVHIVQRGAV 131 (513)
Q Consensus 57 ~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll---~--~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i 131 (513)
.+...++.++.+++.++....... ...++.++.++ . +.++.++..++++++.++..-......+ ..++
T Consensus 476 ~~w~~~eaal~~l~~iae~~~~~~-----~~~l~~l~~~l~~l~~~d~~~~vr~~a~~~l~~~~~~l~~~~~~l--~~vl 548 (971)
T 2x1g_F 476 THWTKLEACIYSFQSVAEHFGGEE-----KRQIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWLMENPAYI--PPAI 548 (971)
T ss_dssp TCCHHHHHHHHHHHHTTTC-----------CHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTHHHHC----CH--HHHH
T ss_pred CcHHHHHHHHHHHHHHHhhcChhh-----hHHHHHHHHHHHhcCccccCHHHHHHHHHHHHHHHHHHhcCHHHH--HHHH
Confidence 466789999999999986543321 12333333332 2 3478999999999999884322111111 1346
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHhhccccchhhH--hcCChHHHHHHhcCC--CHHHHHHHHHHHHhccc
Q 010291 132 RPLIEMLQSPDVQLREMSAFALGRLAQDMHNQAGIA--HNGGLVPLLKLLDSK--NGSLQHNAAFALYGLAD 199 (513)
Q Consensus 132 ~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~--~~~~i~~L~~ll~~~--~~~~~~~a~~~L~~l~~ 199 (513)
+.++..+ + +.++..|++++.+++.... ..+. -...+..+.+++..+ +...+..+..+++.++.
T Consensus 549 ~~l~~~l-~--~~v~~~A~~al~~l~~~~~--~~l~p~~~~ll~~l~~~l~~~~~~~~~~~~~~~ai~~i~~ 615 (971)
T 2x1g_F 549 NLLVRGL-N--SSMSAQATLGLKELCRDCQ--LQLKPYADPLLNACHASLNTGRMKNSDSVRLMFSIGKLMS 615 (971)
T ss_dssp HHHHHHH-H--SSCHHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-C--hHHHHHHHHHHHHHHHHHH--HhccccHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHH
Confidence 6677777 2 6789999999999996432 2222 134455566777763 46778888888888765
No 138
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=95.58 E-value=0.38 Score=43.86 Aligned_cols=155 Identities=15% Similarity=0.071 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHH----Hhhc-CCCHHHHHHHHHHHHHhhcCChhHHHHHHhC--CChH
Q 010291 18 KVQRAAAGALRTLAFKNDENKNQIVECNALPTLI----LMLR-SEDSAIHYEAVGVIGNLVHSSPNIKKEVLAA--GALQ 90 (513)
Q Consensus 18 ~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv----~lL~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~--g~i~ 90 (513)
+.+.-++..++-.+. ++.....+.+.+.-..++ ..+. ...+..+..+++++.|+... +..++.+... .+++
T Consensus 117 ~~~fPvLDLlRl~~l-~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~p~n~ml~lR~l~NlF~~-~~g~~~l~~~~~~il~ 194 (304)
T 3ebb_A 117 DIVFPALDILRLSIK-HPSVNENFCNEKEGAQFSSHLINLLNPKGKPANQLLALRTFCNCFVG-QAGQKLMMSQRESLMS 194 (304)
T ss_dssp TTCHHHHHHHHHHTT-SHHHHHHHHSTTTHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHGGGS-HHHHHHHHHTHHHHHH
T ss_pred HhHHHHHHHHHHHHc-CccHHHHhhccccchHHHHHHHHhcCCCCChHHHHHHHHHHHHccCC-chhHHHHHHHHHHHHH
Confidence 344555555555444 444444444433323333 3333 23566799999999999876 5566665543 2455
Q ss_pred HHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCC-CCHHHHHHHHHHHHHHhhccccchhhHhc
Q 010291 91 PVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQS-PDVQLREMSAFALGRLAQDMHNQAGIAHN 169 (513)
Q Consensus 91 ~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~-~~~~~~~~a~~~L~~l~~~~~~~~~~~~~ 169 (513)
.+...+.+.+..++..++..+.|++......+..=....++..+..+++. .|++....++-+|+++...+.....+.+.
T Consensus 195 ~~~~~~~~~nknl~iA~ATl~~NlAv~~~~~~~~~~~~~ll~~l~~il~~~~d~EalyR~LvALGtL~~~~~~~~~lak~ 274 (304)
T 3ebb_A 195 HAIELKSGSNKNIHIALATLALNYSVCFHKDHNIEGKAQCLSLISTILEVVQDLEATFRLLVALGTLISDDSNAVQLAKS 274 (304)
T ss_dssp HHHGGGSSCCHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhcCCChhHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhCChhHHHHHHH
Confidence 55555556788999999999999984211100000011134455555544 58899999999999999765444444443
Q ss_pred CChHH
Q 010291 170 GGLVP 174 (513)
Q Consensus 170 ~~i~~ 174 (513)
-.+..
T Consensus 275 l~~~~ 279 (304)
T 3ebb_A 275 LGVDS 279 (304)
T ss_dssp TTHHH
T ss_pred cCHHH
Confidence 33333
No 139
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=95.55 E-value=0.055 Score=58.62 Aligned_cols=142 Identities=11% Similarity=0.065 Sum_probs=90.9
Q ss_pred CCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcC-----CCHHHHHHHHHHHHHhhcCChhHHHHHHhCCCh
Q 010291 15 TDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRS-----EDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGAL 89 (513)
Q Consensus 15 ~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~-----~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i 89 (513)
.++..++.++++++.++.+-.+....-.-..+++.|++++.. +...++..++++++..+.--....+ .. ..++
T Consensus 465 ~~W~~~EA~~~a~gaIa~~~~~~~e~~~l~~vi~~Ll~l~~~~~~~d~k~~v~~t~~~~lGry~~wl~~~~~-~L-~~vl 542 (1023)
T 4hat_C 465 WSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKKRGKDNKAVVASDIMYVVGQYPRFLKAHWN-FL-RTVI 542 (1023)
T ss_dssp CCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCHHHHHHCHH-HH-HHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHHHHHHHhccHH-HH-HHHH
Confidence 578999999999999998644332322223467888888863 3345666778999888642111111 11 1245
Q ss_pred HHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHh------cCChH----HHHHHhCCCCHHHHHHHHHHHHHHhhc
Q 010291 90 QPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQ------RGAVR----PLIEMLQSPDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 90 ~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~------~~~i~----~L~~~l~~~~~~~~~~a~~~L~~l~~~ 159 (513)
..|+..+..+++.++..|++++.++|.. ++..+.. ...++ .+...+..-++.-+..+..+++.+...
T Consensus 543 ~~L~~~l~~~~~~v~~~A~~al~~l~~~---c~~~l~~~~~~e~~p~~~~il~~l~~~~~~l~~~~~~~lyeai~~vi~~ 619 (1023)
T 4hat_C 543 LKLFEFMHETHEGVQDMACDTFIKIVQK---CKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISE 619 (1023)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHHHH---HTHHHHSCCTTCSSCHHHHHHHTHHHHHTTSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHH---HHHHhhccCCCCCchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 5566666667789999999999999943 3333431 11233 344444455777778888888888865
Q ss_pred cc
Q 010291 160 MH 161 (513)
Q Consensus 160 ~~ 161 (513)
.+
T Consensus 620 ~~ 621 (1023)
T 4hat_C 620 ER 621 (1023)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 140
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=95.44 E-value=0.0044 Score=46.67 Aligned_cols=80 Identities=14% Similarity=0.152 Sum_probs=58.9
Q ss_pred EEEEecCeeehhhHHHHhhcCHHHHHhccCCC----CCCCCCceecCCCCHHHHHHHHHHHhcCccccCHH-HHHHHHHH
Q 010291 348 VTFLVEGRRFYAHRICLLASSDAFRAMFDGGY----REKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLD-IAQDLLRA 422 (513)
Q Consensus 348 v~~~~~~~~~~~h~~il~~~s~~f~~~~~~~~----~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~-~~~~ll~~ 422 (513)
|.+.|||..|...+..|..... .||...- .....+.+-++ =++..|+.+|+|+-+|.+.++.+ .+..+.+-
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~FiD-Rdp~~F~~ILnflR~g~l~~p~~~~~~~l~~E 77 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFFD-RDPDIFRHILNFYRTGKLHYPRHECISAYDEE 77 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEEC-SCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEEe-CCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHH
Confidence 6789999999999999975432 3443310 01123445554 49999999999999999887654 37889999
Q ss_pred HHHhcHHHH
Q 010291 423 ADQYLLEGL 431 (513)
Q Consensus 423 A~~~~~~~l 431 (513)
|++|+++.+
T Consensus 78 a~fy~i~~l 86 (105)
T 1nn7_A 78 LAFFGLIPE 86 (105)
T ss_dssp HHHHTCCSC
T ss_pred HHHcCCCHH
Confidence 999999886
No 141
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=95.44 E-value=0.011 Score=46.87 Aligned_cols=85 Identities=18% Similarity=0.176 Sum_probs=62.7
Q ss_pred CCcccEEEEecCeeehhhHHHHhhcCHHHHHhccCC----CCCCCCCceecCCCCHHHHHHHHHHHhcCccccCHH-HHH
Q 010291 343 ATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGG----YREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLD-IAQ 417 (513)
Q Consensus 343 ~~~~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~----~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~-~~~ 417 (513)
....-|.+.|||..|...+..|...- ..||... +.....+.+-++ =++..|+.+|+|+-+|.+.++.+ .+.
T Consensus 32 ~~~~~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFiD-Rdp~~F~~ILnflR~G~l~~p~~~~~~ 107 (140)
T 2nz0_B 32 RQDELIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFFD-RDPEVFRCVLNFYRTGKLHYPRYECIS 107 (140)
T ss_dssp TCCCEEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEEC-SCHHHHHHHHHHHHHSSBCCCTTSCHH
T ss_pred CCCCEEEEEECCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEEe-CCcHHHHHHHHHHhcCCcCCCCCcCHH
Confidence 34456889999999999999998542 2344331 011223455554 49999999999999999987654 378
Q ss_pred HHHHHHHHhcHHHH
Q 010291 418 DLLRAADQYLLEGL 431 (513)
Q Consensus 418 ~ll~~A~~~~~~~l 431 (513)
.+++-|+||+++.+
T Consensus 108 ~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 108 AYDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHHTCCGG
T ss_pred HHHHHHHHcCCChH
Confidence 89999999999886
No 142
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=95.37 E-value=0.66 Score=50.15 Aligned_cols=140 Identities=15% Similarity=0.041 Sum_probs=83.8
Q ss_pred cCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChh--HHHHHHhCCChHH
Q 010291 14 FTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPN--IKKEVLAAGALQP 91 (513)
Q Consensus 14 ~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~--~~~~~~~~g~i~~ 91 (513)
+.++.++..++.+|......- ....+.+.+.++.+.++|. +++++..|+.+|..+...... .+..+++.=.+..
T Consensus 204 ~~~~~l~~~~L~~l~s~i~wi--~~~~i~~~~ll~~l~~~L~--~~~~r~~A~ecL~ei~~k~~~~~~k~~li~~l~L~~ 279 (980)
T 3ibv_A 204 AKNYGTVGLCLQVYAQWVSWI--NINLIVNEPCMNLLYSFLQ--IEELRCAACETMTEIVNKKMKPLEKLNLLNILNLNL 279 (980)
T ss_dssp TTCHHHHHHHHHHHHHHTTTS--CHHHHHCHHHHHHHHHHTT--SHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHhhc--CHHhhhcchHHHHHHHHcC--ChHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhHHH
Confidence 367888899999999988632 2345556677888888886 489999999999999865432 2222222201111
Q ss_pred HHHhhc--CCChHHHHHHHHHHHHhh------cCCc-----hhhHH--HHhcCChHHHHHHhCCCCHHHHHHHHHHHHHH
Q 010291 92 VIGLLS--SCCSESQREAALLLGQFA------ATDS-----DCKVH--IVQRGAVRPLIEMLQSPDVQLREMSAFALGRL 156 (513)
Q Consensus 92 L~~ll~--~~~~~~~~~a~~~L~~l~------~~~~-----~~~~~--~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l 156 (513)
.+.-+. ..|.+..+..+..+..++ ...+ +.+.. -.-.+.++.++.++..++.++...+...+..+
T Consensus 280 ~~~~l~~~~~D~d~~~~la~L~~~~ge~l~~~~~~~~~~~~~~~~~~~~~l~~ll~~lL~~~~~~~deVs~~t~~Fw~~~ 359 (980)
T 3ibv_A 280 FFSKSQEQSTDPNFDEHVAKLINAQGVELVAIKSDPSELSPELKENCSFQLYNLFPYLIRYLSDDYDETSTAVFPFLSDL 359 (980)
T ss_dssp HHCC-----CCHHHHHHHHHHHHHHHHHHHHHHTSCC--CHHHHHHHHHHHHHTHHHHHHHHTCSSHHHHHTTHHHHHHH
T ss_pred HHHHHhcccccHHHHHHHHHHHHHHHHHHHHHccCccccchhhhhhHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHH
Confidence 222222 356666655444443332 1122 11111 11136889999999999888877776666655
Q ss_pred h
Q 010291 157 A 157 (513)
Q Consensus 157 ~ 157 (513)
.
T Consensus 360 l 360 (980)
T 3ibv_A 360 L 360 (980)
T ss_dssp H
T ss_pred H
Confidence 5
No 143
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=95.25 E-value=0.38 Score=52.02 Aligned_cols=310 Identities=10% Similarity=-0.001 Sum_probs=160.1
Q ss_pred CChhHHHHhhccCCH-HHHHHHHHHHHHhhcc--C------c----h---hHHHHHhcC---CHHHHHHhhc----CCCH
Q 010291 3 GGIPPLVELLEFTDT-KVQRAAAGALRTLAFK--N------D----E---NKNQIVECN---ALPTLILMLR----SEDS 59 (513)
Q Consensus 3 g~i~~Lv~lL~~~~~-~~~~~a~~~L~~l~~~--~------~----~---~~~~i~~~g---~i~~Lv~lL~----~~~~ 59 (513)
+.++.++++++++++ ......+++|..+... + . + .+..+.+.. +++....+|. +.++
T Consensus 128 ~~i~~l~~~~~~~~~~~~~~~~LriL~~i~EEv~~~~~~~~~~~~~r~~~lkd~m~~~~~~~i~~~~~~iL~~~~~~~~~ 207 (980)
T 3ibv_A 128 DFFASLQGVIAASSQSEFSNFYLKVLLSIGDEIADSLVLKTDVQIQKDNLVKDAIRANDMSDIVSFVYEMMLAYSNAKNY 207 (980)
T ss_dssp THHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHHHhcCCChhHHHHHHHHHHHHhHHHHHhcccccCHHHHhhhHHHHHHHHhccHHHHHHHHHHHHHHHhccCCH
Confidence 346677777766544 3444556666643321 0 0 0 122333221 1333344443 3688
Q ss_pred HHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCc--hhhHHHHhcCChHHHHHH
Q 010291 60 AIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDS--DCKVHIVQRGAVRPLIEM 137 (513)
Q Consensus 60 ~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~--~~~~~~~~~~~i~~L~~~ 137 (513)
.++..++.+|.....--+ -..+...+.++.+..++.+ ++++..|+.+|..+..... +.+..++..=.+...+..
T Consensus 208 ~l~~~~L~~l~s~i~wi~--~~~i~~~~ll~~l~~~L~~--~~~r~~A~ecL~ei~~k~~~~~~k~~li~~l~L~~~~~~ 283 (980)
T 3ibv_A 208 GTVGLCLQVYAQWVSWIN--INLIVNEPCMNLLYSFLQI--EELRCAACETMTEIVNKKMKPLEKLNLLNILNLNLFFSK 283 (980)
T ss_dssp HHHHHHHHHHHHHTTTSC--HHHHHCHHHHHHHHHHTTS--HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhhcC--HHhhhcchHHHHHHHHcCC--hHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhHHHHHHH
Confidence 899999999999876322 2445556677888888864 7899999999999985543 222233322111222222
Q ss_pred hC--CCCHHHHHHHHHHHHHHhhc------ccc------chh--hHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccC-
Q 010291 138 LQ--SPDVQLREMSAFALGRLAQD------MHN------QAG--IAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADN- 200 (513)
Q Consensus 138 l~--~~~~~~~~~a~~~L~~l~~~------~~~------~~~--~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~- 200 (513)
+. ..|.+..+..++.+..++.. .+. +.. -.-.+.++.++..+.+++.++...++..+..+...
T Consensus 284 l~~~~~D~d~~~~la~L~~~~ge~l~~~~~~~~~~~~~~~~~~~~~l~~ll~~lL~~~~~~~deVs~~t~~Fw~~~l~~~ 363 (980)
T 3ibv_A 284 SQEQSTDPNFDEHVAKLINAQGVELVAIKSDPSELSPELKENCSFQLYNLFPYLIRYLSDDYDETSTAVFPFLSDLLVSL 363 (980)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHHTSCC--CHHHHHHHHHHHHHTHHHHHHHHTCSSHHHHHTTHHHHHHHHHHH
T ss_pred HhcccccHHHHHHHHHHHHHHHHHHHHHccCccccchhhhhhHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHHHHH
Confidence 22 45777766555555444311 110 000 11135677788888888888877666665554421
Q ss_pred ---c------chHHHHHh---hcCcccccc-----hhh----h----hhhhHHHHHHHHHHHHHHhhhhhHH----HHHH
Q 010291 201 ---E------DNVADFIR---VGGVQKLQD-----GEF----I----VQATKDCVAKTLKRLEEKIHGRVLN----HLLY 251 (513)
Q Consensus 201 ---~------~~~~~~~~---~g~i~~L~~-----~~~----~----~~~~~~~~~~~~~~~~~~~~~~~l~----~Lv~ 251 (513)
+ .....+.. ...+..+.- ... . ....+.+.....+.+..+....++. .+..
T Consensus 364 ~~~~~~~~~~~~~~~~l~~Ll~~li~k~~yp~d~~~~~~~d~ed~~~F~e~Rk~l~~l~d~~~~l~~~~~l~~~~~~i~~ 443 (980)
T 3ibv_A 364 RKESSSKELSASLKEFLKSLLEAIIKKMKYDESQEWDDDPDSEEEAEFQEMRKKLKIFQDTINSIDSSLFSSYMYSAITS 443 (980)
T ss_dssp HHHTTSCCCCHHHHHHHHHHHHHHHHTTSCCTTCCCCCCSSSSTHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HhccccccccHHHHHHHHHHHHHHHHHccCCCccccccccchhHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 1 11111110 001111100 000 0 0111223332233333333344445 4443
Q ss_pred HHH-------HhhcchhhhHHHHHhhccCCCC--cceeeec----CCchHHHHhhhc-----CCCcchhhhHHHHHHHhh
Q 010291 252 LMR-------VAEKGVQRRVALALAHLCSPDD--QRTIFID----GGGLELLLGLLG-----STNPKQQLDGAVALFKLA 313 (513)
Q Consensus 252 lL~-------~~~~~v~~~a~~aL~~l~~~~~--~~~~l~~----~~~i~~L~~ll~-----~~~~~v~~~a~~~L~~l~ 313 (513)
++. +.++...+.++.+|+.++.+-. .....-+ ...++.+..++. .++|.++..+++++.+.+
T Consensus 444 ~l~~~l~~~~~~~W~~~EaaL~~l~~iaE~i~~~~~~~~~~~~~lp~l~~ll~~ll~s~i~~~~hp~V~~~~~~~l~rys 523 (980)
T 3ibv_A 444 SLSTAATLSPENSWQLIEFALYETYIFGEGLRGPDAFFNEVDKSPTVLSQILALVTTSQVCRHPHPLVQLLYMEILVRYA 523 (980)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHHHHTTTTCCSGGGTBCSSSCCBCHHHHHHHHHHHSSTTTCCCHHHHHHHHHHHHHTG
T ss_pred HHHHHhcccCCCCHHHHHHHHHHHHHHHhhccccccccCcccchhHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHH
Confidence 332 3567789999999999876522 1111001 124455666655 578899999999999887
Q ss_pred hcc
Q 010291 314 NKA 316 (513)
Q Consensus 314 ~~~ 316 (513)
..-
T Consensus 524 ~~~ 526 (980)
T 3ibv_A 524 SFF 526 (980)
T ss_dssp GGG
T ss_pred HHH
Confidence 653
No 144
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=94.88 E-value=0.32 Score=52.79 Aligned_cols=137 Identities=16% Similarity=0.061 Sum_probs=89.8
Q ss_pred ccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhh---cCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCCh
Q 010291 13 EFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILML---RSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGAL 89 (513)
Q Consensus 13 ~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL---~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i 89 (513)
.+.++..+..++.+++.++.+-.... ...++.+++.+ .++++.++..++++++.++..-.... . .-..++
T Consensus 459 ~~~~w~~~eaal~al~~i~~~~~~~~-----~~~l~~l~~~l~~l~~~~~~vr~~~~~~l~~~~~~l~~~~-~-~l~~vl 531 (963)
T 2x19_B 459 EPYSWQHTEALLYGFQSIAETIDVNY-----SDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHP-V-MINSVL 531 (963)
T ss_dssp CSCCHHHHHHHHHHHHHHTTSCCSSC-----CSHHHHHHHHGGGSCCCSHHHHHHHHHHHHHTHHHHHHCH-H-HHTTTH
T ss_pred CCCchHHHHHHHHHHHHHHhhcCchh-----hHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHhCH-H-HHHHHH
Confidence 45678889999999999997633211 12334444433 23578899999999999985322111 1 224688
Q ss_pred HHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCC--CCHHHHHHHHHHHHHHhhc
Q 010291 90 QPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQS--PDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 90 ~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~--~~~~~~~~a~~~L~~l~~~ 159 (513)
+.++..+.+ +.++..|++++.+++......-.. .-..+++.+..++.+ .+...+..+..+++.++..
T Consensus 532 ~~l~~~l~~--~~V~~~A~~al~~l~~~~~~~l~p-~~~~il~~l~~~l~~~~~~~~~~~~~~eai~~i~~~ 600 (963)
T 2x19_B 532 PLVLHALGN--PELSVSSVSTLKKICRECKYDLPP-YAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSA 600 (963)
T ss_dssp HHHHHHTTC--GGGHHHHHHHHHHHHHHTGGGCTT-THHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCC--chHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHhc
Confidence 888888854 889999999999999543221110 012334445555554 2568888889999998854
No 145
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=94.68 E-value=0.38 Score=41.55 Aligned_cols=133 Identities=14% Similarity=0.057 Sum_probs=91.0
Q ss_pred HHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHH-hhcCCCHHHHHHHHHHHHHhhc-CChhHHHHHHhC
Q 010291 9 VELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLIL-MLRSEDSAIHYEAVGVIGNLVH-SSPNIKKEVLAA 86 (513)
Q Consensus 9 v~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~-lL~~~~~~v~~~a~~~L~~l~~-~~~~~~~~~~~~ 86 (513)
.++.+++..++|..|+..|+.. ... ...++.+.. +-.+++-.|++.+..++..++. ..++
T Consensus 77 ~~L~~~~~deVR~~Av~lLg~~-~~~---------~~~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~pe-------- 138 (240)
T 3l9t_A 77 FLAYQSDVYQVRMYAVFLFGYL-SKD---------KEILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEYK-------- 138 (240)
T ss_dssp HHHHTCSSHHHHHHHHHHHHHT-TTS---------HHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCTT--------
T ss_pred HHHHhCcchHHHHHHHHHHHhc-cCc---------HHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHH--------
Confidence 3444677789999999988877 311 123455555 4446788999999999999985 3333
Q ss_pred CChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhcccc
Q 010291 87 GALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDMHN 162 (513)
Q Consensus 87 g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~ 162 (513)
..++.+.....+++..+|+.|...+.--+.. +... .....+++.+-.+..+++..++....+.|..+++.++.
T Consensus 139 ~~l~~~~~W~~d~n~~VRR~Ase~~rpW~~~-~~~k--~dp~~ll~iL~~L~~D~s~yVrKSVan~LrD~SK~~Pd 211 (240)
T 3l9t_A 139 KALPIIDEWLKSSNLHTRRAATEGLRIWTNR-PYFK--ENPNEAIRRIADLKEDVSEYVRKSVGNALRDISKKFPD 211 (240)
T ss_dssp TTHHHHHHHHHCSSHHHHHHHHHHTCSGGGS-TTTT--TCHHHHHHHHHTTTTCSCHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHhhHHHhcc-chhh--cCHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhCHH
Confidence 1577888999999999999988776543322 1111 01112355555666678899999999999999976654
No 146
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=94.58 E-value=0.01 Score=44.06 Aligned_cols=84 Identities=15% Similarity=0.141 Sum_probs=58.8
Q ss_pred EEEEecCeeehhhHHHHhhcCH-HHHHhccC-CCCCCCCCceecCCCCHHHHHHHHHHHhc-CccccCHH-HHHHHHHHH
Q 010291 348 VTFLVEGRRFYAHRICLLASSD-AFRAMFDG-GYREKDARDIEIPNIRWEVFELMMRFIYT-GSVDVTLD-IAQDLLRAA 423 (513)
Q Consensus 348 v~~~~~~~~~~~h~~il~~~s~-~f~~~~~~-~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~-~~~~~~~~-~~~~ll~~A 423 (513)
|.+.|||..|...+..|...-. .+.+|++. ..-....+.+-+ |=++..|+.+|+|+-+ |++..+.+ .+..+.+-|
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea 81 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEI 81 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHH
Confidence 6789999999999999964321 22223321 011123345655 4589999999999998 88876544 367899999
Q ss_pred HHhcHHHHH
Q 010291 424 DQYLLEGLK 432 (513)
Q Consensus 424 ~~~~~~~l~ 432 (513)
++|+++.+.
T Consensus 82 ~fy~i~~~~ 90 (100)
T 1t1d_A 82 KFYELGENA 90 (100)
T ss_dssp HHTTCCHHH
T ss_pred HHcCCCHHH
Confidence 999998754
No 147
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=94.48 E-value=0.15 Score=55.38 Aligned_cols=140 Identities=9% Similarity=0.026 Sum_probs=87.9
Q ss_pred CCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcC-----CChHHHHHHHHHHHHhhcCCchhhHHHHhcCCh
Q 010291 57 EDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSS-----CCSESQREAALLLGQFAATDSDCKVHIVQRGAV 131 (513)
Q Consensus 57 ~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~-----~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i 131 (513)
.+...++.++++++.++..-......-.-..+++.|+.++++ ....++..++|+++..+.--...... =..++
T Consensus 465 ~~W~~~EA~~~a~gaIa~~~~~~~e~~~l~~vi~~Ll~l~~~~~~~d~k~~v~~t~~~~lGry~~wl~~~~~~--L~~vl 542 (1023)
T 4hat_C 465 WSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKKRGKDNKAVVASDIMYVVGQYPRFLKAHWNF--LRTVI 542 (1023)
T ss_dssp CCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCHHHHHHCHHH--HHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHHHHHHHhccHHH--HHHHH
Confidence 468899999999999997644322222223467778887763 22345567789998887421111111 12356
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHhhccccchhhHh------cCChHH----HHHHhcCCCHHHHHHHHHHHHhcccC
Q 010291 132 RPLIEMLQSPDVQLREMSAFALGRLAQDMHNQAGIAH------NGGLVP----LLKLLDSKNGSLQHNAAFALYGLADN 200 (513)
Q Consensus 132 ~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~------~~~i~~----L~~ll~~~~~~~~~~a~~~L~~l~~~ 200 (513)
+.|+..+.++++.++..|++++.++|... +..+.. ...++. +...+..-+..-...+..+++.+...
T Consensus 543 ~~L~~~l~~~~~~v~~~A~~al~~l~~~c--~~~l~~~~~~e~~p~~~~il~~l~~~~~~l~~~~~~~lyeai~~vi~~ 619 (1023)
T 4hat_C 543 LKLFEFMHETHEGVQDMACDTFIKIVQKC--KYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISE 619 (1023)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHHHHH--THHHHSCCTTCSSCHHHHHHHTHHHHHTTSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHH--HHHhhccCCCCCchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 66777777888999999999999999743 222321 112333 34444445566667777888877763
No 148
>3c2g_A SYS-1 protein; beta-catenin, phylogeny, SYS-1, developmental protein, DNA-binding, nucleus; 2.50A {Caenorhabditis elegans} PDB: 3c2h_A*
Probab=94.41 E-value=0.51 Score=42.94 Aligned_cols=135 Identities=11% Similarity=0.101 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhc-
Q 010291 19 VQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLS- 97 (513)
Q Consensus 19 ~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~- 97 (513)
+..++...|.-+. ++......+++.+++..+....+-++.++.+..+..|...+.. ......- -...+|.++..++
T Consensus 259 VvtR~FDLL~LLm-HdSnAIDGFVk~DGv~~I~TvinYpN~~l~RaG~KLLLQVSDa-ksL~~t~-L~e~LPFi~~~i~~ 335 (619)
T 3c2g_A 259 VIIRTFDLLGLLL-HDSDAIDGFVRSDGVGAITTVVQYPNNDLIRAGCKLLLQVSDA-KALAKTP-LENILPFLLRLIEI 335 (619)
T ss_dssp HHHHHHHHHHHHC-CSHHHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHTTC-GGGGTSC-CTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-cccccccceeecccceeEEEEeecCCcHHHHhhhheeeeecch-HHHhhcc-ccccchHHHHHhcc
Confidence 4455555555444 4677788899999999999999999999999999999888743 2211100 1246777777776
Q ss_pred CCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCC-------CHHHHHHHHHHHHHH
Q 010291 98 SCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSP-------DVQLREMSAFALGRL 156 (513)
Q Consensus 98 ~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~-------~~~~~~~a~~~L~~l 156 (513)
+++.++.+.....|+|...+....++..+..|++..|-+.+... +..-+..+|..++|.
T Consensus 336 h~eDdvvYSGTGFLSNVVAHKq~VKelAI~~nAI~LLh~~I~ky~~Lsdf~ea~Kkk~aC~IicN~ 401 (619)
T 3c2g_A 336 HPDDEVIYSGTGFLSNVVAHKQHVKDIAIRSNAIFLLHTIISKYPRLDELTDAPKRNRVCEIICNC 401 (619)
T ss_dssp CCCHHHHHHHHHHHHHHSTTCHHHHHHHHHTTHHHHHHHHHHTSCCGGGCCSHHHHHHHHHHHHHH
T ss_pred CCCcceEEecchHHHHHHhcccchHHHHhccCcHHHHHHHHhhCCChhhhhhhhhhcchHHHHHHH
Confidence 57889999999999999988888888888899999988777431 334455566655554
No 149
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=94.21 E-value=2.4 Score=36.99 Aligned_cols=126 Identities=14% Similarity=0.198 Sum_probs=85.7
Q ss_pred hhHHHHHhcCCHHHHHHhhcC----C-------CHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHH
Q 010291 36 ENKNQIVECNALPTLILMLRS----E-------DSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQ 104 (513)
Q Consensus 36 ~~~~~i~~~g~i~~Lv~lL~~----~-------~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~ 104 (513)
.....+ ..+|+..|+..|.. + +.+.+..++.||..+..........+-..+++..+...+.++.+.++
T Consensus 35 ~Wv~~F-~~~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~~~~~r 113 (233)
T 2f31_A 35 SWVQTF-GAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMM 113 (233)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHHHHTSSHHHHHHHHTSSSHHHHHHTTCCTTSHHHH
T ss_pred HHHHHH-HHhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHhCChHHHHHHHcCcHHHHHHHHHhCCCCchHH
Confidence 445555 56788888888762 1 34667789999999986544443334345689999999999999999
Q ss_pred HHHHHHHHHhhcCCc-hh-hHHH----------HhcCChHHHHHHhCC-CCHHHHHHHHHHHHHHhhcccc
Q 010291 105 REAALLLGQFAATDS-DC-KVHI----------VQRGAVRPLIEMLQS-PDVQLREMSAFALGRLAQDMHN 162 (513)
Q Consensus 105 ~~a~~~L~~l~~~~~-~~-~~~~----------~~~~~i~~L~~~l~~-~~~~~~~~a~~~L~~l~~~~~~ 162 (513)
..+...|..+|..+. +. ...+ -+..-...+++.+++ .+.+.+..+...+..+....++
T Consensus 114 ~~~leLL~~lc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l~~~~~~e~~~~~m~lIN~li~~~~d 184 (233)
T 2f31_A 114 IDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINALITPAEE 184 (233)
T ss_dssp HHHHHHHHHHHTCSSSSCHHHHHHHHHHHHHHHHTSCTTHHHHHTTSTTSCHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhCCCCCChHHHHHHHHHHHHHhCCcchHHHHHHHHhcCChHHHHHHHHHHHHHHHCCCCC
Confidence 999999988885543 12 2211 223356667887774 4667777777777777766544
No 150
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=94.06 E-value=0.54 Score=45.06 Aligned_cols=122 Identities=18% Similarity=0.114 Sum_probs=92.9
Q ss_pred CCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHH
Q 010291 56 SEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLI 135 (513)
Q Consensus 56 ~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~ 135 (513)
.+++..++.|+..+.....+.|+.++. ++..++.++++++..+|..|...|-.+|.+ +... .+...|.
T Consensus 39 kg~~k~K~LaaQ~I~kffk~FP~l~~~-----Ai~a~lDLcEDed~~IR~qaik~Lp~~ck~--~~i~-----kiaDvL~ 106 (507)
T 3u0r_A 39 KGGTKEKRLAAQFIPKFFKHFPELADS-----AINAQLDLCEDEDVSIRRQAIKELPQFATG--ENLP-----RVADILT 106 (507)
T ss_dssp GSCHHHHHHHHHHHHHHGGGCGGGHHH-----HHHHHHHHHTCSSHHHHHHHHHHGGGGCCT--TCHH-----HHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhChhhHHH-----HHHHHHHHHhcccHHHHHHHHHhhHHHhhh--hhhh-----hHHHHHH
Confidence 457889999999999999998987665 578899999999999999999999999966 3333 3466899
Q ss_pred HHhCCCCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHh
Q 010291 136 EMLQSPDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYG 196 (513)
Q Consensus 136 ~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~ 196 (513)
++|..+++.-...+-.+|..+...++. +.+..+..-+..+++.+++.++..|..
T Consensus 107 QlLqtdd~~E~~~V~~sL~sllk~Dpk-------~tl~~lf~~i~~~~e~~Rer~lkFi~~ 160 (507)
T 3u0r_A 107 QLLQTDDSAEFNLVNNALLSIFKMDAK-------GTLGGLFSQILQGEDIVRERAIKFLST 160 (507)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHHHCHH-------HHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHhccchHHHHHHHHHHHHHHhcChH-------HHHHHHHHHHcccchHHHHHHHHHHHH
Confidence 999999887777777777777643322 334444544445677888887777653
No 151
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=93.53 E-value=1.4 Score=47.60 Aligned_cols=134 Identities=12% Similarity=0.043 Sum_probs=87.0
Q ss_pred cCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhh---cCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCCh
Q 010291 55 RSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLL---SSCCSESQREAALLLGQFAATDSDCKVHIVQRGAV 131 (513)
Q Consensus 55 ~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll---~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i 131 (513)
.+.+...++.++++++.++....... ...++.++..+ .++++.++..++++++.++..-..... . -..++
T Consensus 459 ~~~~w~~~eaal~al~~i~~~~~~~~-----~~~l~~l~~~l~~l~~~~~~vr~~~~~~l~~~~~~l~~~~~-~-l~~vl 531 (963)
T 2x19_B 459 EPYSWQHTEALLYGFQSIAETIDVNY-----SDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPV-M-INSVL 531 (963)
T ss_dssp CSCCHHHHHHHHHHHHHHTTSCCSSC-----CSHHHHHHHHGGGSCCCSHHHHHHHHHHHHHTHHHHHHCHH-H-HTTTH
T ss_pred CCCchHHHHHHHHHHHHHHhhcCchh-----hHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHhCHH-H-HHHHH
Confidence 44577889999999999986543210 12233344333 235788999999999998743221111 2 24688
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHhhccccchhhH--hcCChHHHHHHhcCC--CHHHHHHHHHHHHhccc
Q 010291 132 RPLIEMLQSPDVQLREMSAFALGRLAQDMHNQAGIA--HNGGLVPLLKLLDSK--NGSLQHNAAFALYGLAD 199 (513)
Q Consensus 132 ~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~--~~~~i~~L~~ll~~~--~~~~~~~a~~~L~~l~~ 199 (513)
+.++..+.+ +.++..|+.++.+++.... ..+. -...+..+..++... +...+..+..+++.++.
T Consensus 532 ~~l~~~l~~--~~V~~~A~~al~~l~~~~~--~~l~p~~~~il~~l~~~l~~~~~~~~~~~~~~eai~~i~~ 599 (963)
T 2x19_B 532 PLVLHALGN--PELSVSSVSTLKKICRECK--YDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLS 599 (963)
T ss_dssp HHHHHHTTC--GGGHHHHHHHHHHHHHHTG--GGCTTTHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCC--chHHHHHHHHHHHHHHHHH--HHHHhhHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHh
Confidence 899988865 7899999999999996432 2221 122344455566643 46777888888888875
No 152
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=93.43 E-value=0.37 Score=43.96 Aligned_cols=123 Identities=12% Similarity=0.051 Sum_probs=77.2
Q ss_pred CCHHHHHHHHHHHHHhhccCchhHHHHHhc--CCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHH--HHHHhCCChH
Q 010291 15 TDTKVQRAAAGALRTLAFKNDENKNQIVEC--NALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIK--KEVLAAGALQ 90 (513)
Q Consensus 15 ~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~--g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~--~~~~~~g~i~ 90 (513)
..+..+..+++++.|+-. ++..+..+... .+++.+...+.+++..++..++.++.|++......+ +.. ...+.
T Consensus 160 ~~p~n~ml~lR~l~NlF~-~~~g~~~l~~~~~~il~~~~~~~~~~nknl~iA~ATl~~NlAv~~~~~~~~~~~--~~ll~ 236 (304)
T 3ebb_A 160 GKPANQLLALRTFCNCFV-GQAGQKLMMSQRESLMSHAIELKSGSNKNIHIALATLALNYSVCFHKDHNIEGK--AQCLS 236 (304)
T ss_dssp SCHHHHHHHHHHHHHGGG-SHHHHHHHHHTHHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHHHHHSCCHHHH--HHHHH
T ss_pred CChHHHHHHHHHHHHccC-CchhHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHhhcCCchHH--HHHHH
Confidence 356779999999999997 56666666542 344555555556789999999999999985321100 110 11334
Q ss_pred HHHHhhcC-CChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCC
Q 010291 91 PVIGLLSS-CCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQS 140 (513)
Q Consensus 91 ~L~~ll~~-~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~ 140 (513)
.+..+++. .+.+....++.+|+++...+.+..+.....|+-..+-+..+.
T Consensus 237 ~l~~il~~~~d~EalyR~LvALGtL~~~~~~~~~lak~l~~~~~v~~~~~~ 287 (304)
T 3ebb_A 237 LISTILEVVQDLEATFRLLVALGTLISDDSNAVQLAKSLGVDSQIKKYSSV 287 (304)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHGGGGGGC
T ss_pred HHHHHHhccCCHHHHHHHHHHHHHHHhCChhHHHHHHHcCHHHHHHHHHhC
Confidence 44444543 578999999999999997655444333333333333333333
No 153
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=93.01 E-value=6.1 Score=37.28 Aligned_cols=139 Identities=14% Similarity=0.167 Sum_probs=92.7
Q ss_pred HHHHHHHhhccC-chhHHHHHhcCCHHHHHHhhcC-----------CCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChH
Q 010291 23 AAGALRTLAFKN-DENKNQIVECNALPTLILMLRS-----------EDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQ 90 (513)
Q Consensus 23 a~~~L~~l~~~~-~~~~~~i~~~g~i~~Lv~lL~~-----------~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~ 90 (513)
.+..|..-.+.+ ......+. .+|+..|+..|.. .+...+..+++||..+..........+-....+.
T Consensus 87 ~L~sL~v~Lrt~~~sWV~~F~-~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkalmN~~~G~~~vl~~~~~i~ 165 (383)
T 3eg5_B 87 CLESLRVSLTSHPVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGIL 165 (383)
T ss_dssp HHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHHTSSHHHHHHHHTCSSHHH
T ss_pred HHHHHHHHHhhCccHHHHHHH-HccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHhcchhhHHHHHcChHHHH
Confidence 344444333323 24445555 6678888888851 2347788899999999865444433444457899
Q ss_pred HHHHhhcCCChHHHHHHHHHHHHhhcCCc-hh-hHHH----------HhcCChHHHHHHhCC-CCHHHHHHHHHHHHHHh
Q 010291 91 PVIGLLSSCCSESQREAALLLGQFAATDS-DC-KVHI----------VQRGAVRPLIEMLQS-PDVQLREMSAFALGRLA 157 (513)
Q Consensus 91 ~L~~ll~~~~~~~~~~a~~~L~~l~~~~~-~~-~~~~----------~~~~~i~~L~~~l~~-~~~~~~~~a~~~L~~l~ 157 (513)
.|...+.+..+.++..+...|..+|.... .. ...+ .+..-...++..++. .+.+.+..+...+..+.
T Consensus 166 ~l~~~L~s~~~~~~~~aleLL~~lc~~~~~~gG~~~VL~Al~~~~~~~e~~RF~~lv~~L~~~~~~e~~~~~m~lIN~li 245 (383)
T 3eg5_B 166 LLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINALI 245 (383)
T ss_dssp HHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHTTSTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCchHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHHhCCCCcHHHHHHHHHccCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999886553 22 2221 233457778888887 57778777777777777
Q ss_pred hcccc
Q 010291 158 QDMHN 162 (513)
Q Consensus 158 ~~~~~ 162 (513)
...++
T Consensus 246 ~~~~d 250 (383)
T 3eg5_B 246 TPAEE 250 (383)
T ss_dssp TTCCC
T ss_pred cCCCC
Confidence 65544
No 154
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=92.82 E-value=1.4 Score=38.55 Aligned_cols=144 Identities=14% Similarity=0.226 Sum_probs=87.7
Q ss_pred CChhHHHHhhcc----C-------CHHHHHHHHHHHHHhhccCchhHHHHH-hcCCHHHHHHhhcCCCHHHHHHHHHHHH
Q 010291 3 GGIPPLVELLEF----T-------DTKVQRAAAGALRTLAFKNDENKNQIV-ECNALPTLILMLRSEDSAIHYEAVGVIG 70 (513)
Q Consensus 3 g~i~~Lv~lL~~----~-------~~~~~~~a~~~L~~l~~~~~~~~~~i~-~~g~i~~Lv~lL~~~~~~v~~~a~~~L~ 70 (513)
||+..|+..|.. + +...+..++.+|..+.. +......+. ..+.+..+...|.++++.++..++..|.
T Consensus 43 ~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~l~CLkalmn-~~~G~~~vl~~~~~i~~l~~~L~s~~~~~r~~~leLL~ 121 (233)
T 2f31_A 43 EGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMN-NKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLS 121 (233)
T ss_dssp HHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHHHHTS-SHHHHHHHHTSSSHHHHHHTTCCTTSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHhC-ChHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHH
Confidence 455666666632 1 34678889999999986 444444444 4678899999999999999999999999
Q ss_pred HhhcCCh-hH-HHHHH----------hCCChHHHHHhhcC-CChHHHHHHHHHHHHhhcCCchh------hHHHHhcCCh
Q 010291 71 NLVHSSP-NI-KKEVL----------AAGALQPVIGLLSS-CCSESQREAALLLGQFAATDSDC------KVHIVQRGAV 131 (513)
Q Consensus 71 ~l~~~~~-~~-~~~~~----------~~g~i~~L~~ll~~-~~~~~~~~a~~~L~~l~~~~~~~------~~~~~~~~~i 131 (513)
.+|..+. +. ...+. +..-...+++.+.. .+.+.+..+...+..+....++. |..+...|..
T Consensus 122 ~lc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l~~~~~~e~~~~~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~ 201 (233)
T 2f31_A 122 ALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLH 201 (233)
T ss_dssp HHHTCSSSSCHHHHHHHHHHHHHHHHTSCTTHHHHHTTSTTSCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHH
T ss_pred HHHhCCCCCChHHHHHHHHHHHHHhCCcchHHHHHHHHhcCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCChH
Confidence 8886543 12 22222 22355667777764 44566666665555565443322 2233445555
Q ss_pred HHHHHHhCCCCHHHHH
Q 010291 132 RPLIEMLQSPDVQLRE 147 (513)
Q Consensus 132 ~~L~~~l~~~~~~~~~ 147 (513)
+.+-++-...++++..
T Consensus 202 ~il~~l~~~~~~~L~~ 217 (233)
T 2f31_A 202 QVLQELREIENEDMKV 217 (233)
T ss_dssp HHHHHHHHCCCHHHHH
T ss_pred HHHHHHhccCCHHHHH
Confidence 4444333334555443
No 155
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=92.51 E-value=2.5 Score=39.99 Aligned_cols=142 Identities=14% Similarity=0.214 Sum_probs=90.9
Q ss_pred CChhHHHHhhcc-----------CCHHHHHHHHHHHHHhhccCchhHHHH-HhcCCHHHHHHhhcCCCHHHHHHHHHHHH
Q 010291 3 GGIPPLVELLEF-----------TDTKVQRAAAGALRTLAFKNDENKNQI-VECNALPTLILMLRSEDSAIHYEAVGVIG 70 (513)
Q Consensus 3 g~i~~Lv~lL~~-----------~~~~~~~~a~~~L~~l~~~~~~~~~~i-~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~ 70 (513)
+|+..|+..|.. .+...+..+++||..+.. +......+ .....+..+...|.+.++.++..++..|.
T Consensus 109 ~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkalmN-~~~G~~~vl~~~~~i~~l~~~L~s~~~~~~~~aleLL~ 187 (383)
T 3eg5_B 109 EGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMN-NKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLS 187 (383)
T ss_dssp HHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHHTS-SHHHHHHHHTCSSHHHHHHHTCCTTSHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHhc-chhhHHHHHcChHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 345666666631 234778889999999986 44444444 44678899999999999999999999999
Q ss_pred HhhcCCh-hH-HHHH----------HhCCChHHHHHhhcC-CChHHHHHHHHHHHHhhcCCchh------hHHHHhcCCh
Q 010291 71 NLVHSSP-NI-KKEV----------LAAGALQPVIGLLSS-CCSESQREAALLLGQFAATDSDC------KVHIVQRGAV 131 (513)
Q Consensus 71 ~l~~~~~-~~-~~~~----------~~~g~i~~L~~ll~~-~~~~~~~~a~~~L~~l~~~~~~~------~~~~~~~~~i 131 (513)
.+|..+. .. ...+ .+..-...++..+.. .+.+.+..+...+..+....+.. +..+...|..
T Consensus 188 ~lc~~~~~~gG~~~VL~Al~~~~~~~e~~RF~~lv~~L~~~~~~e~~~~~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~ 267 (383)
T 3eg5_B 188 ALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLH 267 (383)
T ss_dssp HHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHTTSTTSCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHH
T ss_pred HHHhCcCcCCcHHHHHHHHHHHHHhCCCCcHHHHHHHHHccCcHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCChH
Confidence 9987653 21 2222 233457778888876 45677766666666666554432 2234455555
Q ss_pred HHHHHHhCC-CCHHHH
Q 010291 132 RPLIEMLQS-PDVQLR 146 (513)
Q Consensus 132 ~~L~~~l~~-~~~~~~ 146 (513)
+.+-. ++. .++.+.
T Consensus 268 ~il~~-lr~~~~~~L~ 282 (383)
T 3eg5_B 268 QVLQE-LREIENEDMK 282 (383)
T ss_dssp HHHHH-HTTSCCHHHH
T ss_pred HHHHH-HhcCCChhHH
Confidence 54444 554 455544
No 156
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=92.39 E-value=0.79 Score=50.21 Aligned_cols=141 Identities=10% Similarity=0.030 Sum_probs=85.3
Q ss_pred CCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcC-----CCHHHHHHHHHHHHHhhcCChhHHHHHHhCCCh
Q 010291 15 TDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRS-----EDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGAL 89 (513)
Q Consensus 15 ~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~-----~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i 89 (513)
.++..+..|+.+++.++.+-......-.-..+++.++.+... +.+.++..++++++.++..-....+.+ ..++
T Consensus 465 ~~W~~~eaal~algsia~~~~~~~e~~~l~~v~~~l~~l~~~~~~~~~~~~v~~~~~~~lgry~~~~~~~~~~l--~~vl 542 (1049)
T 3m1i_C 465 WSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLTVKKRGKDNKAVVASDIMYVVGQYPRFLKAHWNFL--RTVI 542 (1049)
T ss_dssp CCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHCHHHHHHCHHHH--HHHH
T ss_pred CCHHHHHHHHHHHHHHhcccCchhhHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHhHHHHH--HHHH
Confidence 578889999999999986432221111112244555554331 344556568899988774311111111 2356
Q ss_pred HHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHH----------hcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhc
Q 010291 90 QPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIV----------QRGAVRPLIEMLQSPDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 90 ~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~----------~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~ 159 (513)
+.++..+.+.++.++..|++++.+++... +..+. -..++..+..++...+.+-......+++.+...
T Consensus 543 ~~ll~~l~~~~~~V~~~A~~al~~l~~~~---~~~l~~~~~~~~~p~~~~il~~l~~~~~~~~~~~~~~~~eai~~ii~~ 619 (1049)
T 3m1i_C 543 LKLFEFMHETHEGVQDMACDTFIKIVQKC---KYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISE 619 (1049)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHHHHHHH---THHHHSCCTTCSSCHHHHHHHTHHHHHTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHH---HHHhhcccCCCCCcHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHc
Confidence 77777888888999999999999999542 22222 122344455556665555566777777777644
Q ss_pred c
Q 010291 160 M 160 (513)
Q Consensus 160 ~ 160 (513)
.
T Consensus 620 ~ 620 (1049)
T 3m1i_C 620 E 620 (1049)
T ss_dssp C
T ss_pred C
Confidence 3
No 157
>3c2g_A SYS-1 protein; beta-catenin, phylogeny, SYS-1, developmental protein, DNA-binding, nucleus; 2.50A {Caenorhabditis elegans} PDB: 3c2h_A*
Probab=91.86 E-value=2.3 Score=38.84 Aligned_cols=117 Identities=11% Similarity=0.159 Sum_probs=86.0
Q ss_pred HHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhC-C
Q 010291 62 HYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQ-S 140 (513)
Q Consensus 62 ~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~-~ 140 (513)
...+...|+-+..+ .+.-+-++..+|+..+...++-++.++.+..+..|...+....-+.. --...+|.++..+. .
T Consensus 260 vtR~FDLL~LLmHd-SnAIDGFVk~DGv~~I~TvinYpN~~l~RaG~KLLLQVSDaksL~~t--~L~e~LPFi~~~i~~h 336 (619)
T 3c2g_A 260 IIRTFDLLGLLLHD-SDAIDGFVRSDGVGAITTVVQYPNNDLIRAGCKLLLQVSDAKALAKT--PLENILPFLLRLIEIH 336 (619)
T ss_dssp HHHHHHHHHHHCCS-HHHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCGGGGTS--CCTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcc-cccccceeecccceeEEEEeecCCcHHHHhhhheeeeecchHHHhhc--cccccchHHHHHhccC
Confidence 34455555555544 66678899999999999999999999999999999888633222111 11346788887776 5
Q ss_pred CCHHHHHHHHHHHHHHhhcccc-chhhHhcCChHHHHHHhcC
Q 010291 141 PDVQLREMSAFALGRLAQDMHN-QAGIAHNGGLVPLLKLLDS 181 (513)
Q Consensus 141 ~~~~~~~~a~~~L~~l~~~~~~-~~~~~~~~~i~~L~~ll~~ 181 (513)
++.++.+...+.|.|+..+... ++..+..|++..|...+..
T Consensus 337 ~eDdvvYSGTGFLSNVVAHKq~VKelAI~~nAI~LLh~~I~k 378 (619)
T 3c2g_A 337 PDDEVIYSGTGFLSNVVAHKQHVKDIAIRSNAIFLLHTIISK 378 (619)
T ss_dssp CCHHHHHHHHHHHHHHSTTCHHHHHHHHHTTHHHHHHHHHHT
T ss_pred CCcceEEecchHHHHHHhcccchHHHHhccCcHHHHHHHHhh
Confidence 6889999999999999987755 5555678888887777643
No 158
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=91.79 E-value=1.1 Score=49.10 Aligned_cols=139 Identities=9% Similarity=0.034 Sum_probs=80.8
Q ss_pred CCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcC-----CChHHHHHHHHHHHHhhcCCchhhHHHHhcCCh
Q 010291 57 EDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSS-----CCSESQREAALLLGQFAATDSDCKVHIVQRGAV 131 (513)
Q Consensus 57 ~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~-----~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i 131 (513)
.+...++.++++++.++.........-.-..+++.+..+... +.+-++..++++++..+..-......+ ..++
T Consensus 465 ~~W~~~eaal~algsia~~~~~~~e~~~l~~v~~~l~~l~~~~~~~~~~~~v~~~~~~~lgry~~~~~~~~~~l--~~vl 542 (1049)
T 3m1i_C 465 WSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLTVKKRGKDNKAVVASDIMYVVGQYPRFLKAHWNFL--RTVI 542 (1049)
T ss_dssp CCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHCHHHHHHCHHHH--HHHH
T ss_pred CCHHHHHHHHHHHHHHhcccCchhhHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHhHHHHH--HHHH
Confidence 467889999999999986432221111112244445554332 233444468899987763211111111 2467
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHhhccccchhhH----------hcCChHHHHHHhcCCCHHHHHHHHHHHHhccc
Q 010291 132 RPLIEMLQSPDVQLREMSAFALGRLAQDMHNQAGIA----------HNGGLVPLLKLLDSKNGSLQHNAAFALYGLAD 199 (513)
Q Consensus 132 ~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~----------~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~ 199 (513)
+.++..+.++++.++..|+.++.+++... +..+. -...+..+..++...+.+-......+++.++.
T Consensus 543 ~~ll~~l~~~~~~V~~~A~~al~~l~~~~--~~~l~~~~~~~~~p~~~~il~~l~~~~~~~~~~~~~~~~eai~~ii~ 618 (1049)
T 3m1i_C 543 LKLFEFMHETHEGVQDMACDTFIKIVQKC--KYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIIS 618 (1049)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHHHHHHH--THHHHSCCTTCSSCHHHHHHHTHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHH--HHHhhcccCCCCCcHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 77888888889999999999999999743 22222 01223334455555454445555666666644
No 159
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=91.29 E-value=6.1 Score=37.38 Aligned_cols=149 Identities=15% Similarity=0.220 Sum_probs=96.1
Q ss_pred hhHHHHHhcCCHHHHHHhhcC----C-------CHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcCCChHHH
Q 010291 36 ENKNQIVECNALPTLILMLRS----E-------DSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSSCCSESQ 104 (513)
Q Consensus 36 ~~~~~i~~~g~i~~Lv~lL~~----~-------~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~ 104 (513)
.....+. .+|+..|+..|.. . +......++.||..+.....+....+...+++..+...+.+..+.++
T Consensus 39 ~Wv~~F~-~~Gl~~Ll~~L~~~~~~~~~~~~~~d~~~~~~~l~CLkalmN~~~Gl~~vl~~~~~i~~l~~sL~s~~~~~r 117 (386)
T 2bnx_A 39 SWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMM 117 (386)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHTSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHH
T ss_pred HHHHHHH-HhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhCCHHHHHHHHcCcHHHHHHHHHhCCCCchHH
Confidence 4444553 5778888887751 1 34678889999999986644444444455789999999999999999
Q ss_pred HHHHHHHHHhhcCCc-hh-hHHH----------HhcCChHHHHHHhCC-CCHHHHHHHHHHHHHHhhcccc-------ch
Q 010291 105 REAALLLGQFAATDS-DC-KVHI----------VQRGAVRPLIEMLQS-PDVQLREMSAFALGRLAQDMHN-------QA 164 (513)
Q Consensus 105 ~~a~~~L~~l~~~~~-~~-~~~~----------~~~~~i~~L~~~l~~-~~~~~~~~a~~~L~~l~~~~~~-------~~ 164 (513)
..+...|..+|.... +. ...+ .+..-...++..+.. .+.+.+..+...+..+....++ |.
T Consensus 118 ~~vleLL~alc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l~~~~~~e~~~a~m~lIN~lv~~~~dl~~R~~LR~ 197 (386)
T 2bnx_A 118 IDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINALITPAEELDFRVHIRS 197 (386)
T ss_dssp HHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHHTSTTSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCChHHHHHHHHHHHHHhCchhhHHHHHHHHHcCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence 999988888886543 22 1111 233456668888874 5677777777777777766554 22
Q ss_pred hhHhcCChHHHHHHhcC-CCHHH
Q 010291 165 GIAHNGGLVPLLKLLDS-KNGSL 186 (513)
Q Consensus 165 ~~~~~~~i~~L~~ll~~-~~~~~ 186 (513)
.+... |+..++.-++. .++.+
T Consensus 198 Ef~~~-GL~~il~~Lr~~~~~~L 219 (386)
T 2bnx_A 198 ELMRL-GLHQVLQELREIENEDM 219 (386)
T ss_dssp HHHHT-THHHHHHHHTTCCCHHH
T ss_pred HHHHC-ChHHHHHHHhccCChhH
Confidence 33334 45554555544 44443
No 160
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=90.33 E-value=4.4 Score=38.37 Aligned_cols=145 Identities=14% Similarity=0.215 Sum_probs=90.0
Q ss_pred CChhHHHHhhcc----C-------CHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHH
Q 010291 3 GGIPPLVELLEF----T-------DTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGN 71 (513)
Q Consensus 3 g~i~~Lv~lL~~----~-------~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~ 71 (513)
+|+..|+..|.. + +...+..++.||..+..........+...+++..+...|.++++.++..++..|..
T Consensus 47 ~Gl~~Ll~~L~~~~~~~~~~~~~~d~~~~~~~l~CLkalmN~~~Gl~~vl~~~~~i~~l~~sL~s~~~~~r~~vleLL~a 126 (386)
T 2bnx_A 47 EGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSA 126 (386)
T ss_dssp HHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHTSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhCCHHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHH
Confidence 355566666531 1 35678889999999986333333444456788999999998999999999999998
Q ss_pred hhcCCh-hH-HHHHH----------hCCChHHHHHhhcC-CChHHHHHHHHHHHHhhcCCch------hhHHHHhcCChH
Q 010291 72 LVHSSP-NI-KKEVL----------AAGALQPVIGLLSS-CCSESQREAALLLGQFAATDSD------CKVHIVQRGAVR 132 (513)
Q Consensus 72 l~~~~~-~~-~~~~~----------~~g~i~~L~~ll~~-~~~~~~~~a~~~L~~l~~~~~~------~~~~~~~~~~i~ 132 (513)
+|..+. +. ...+. +..-...++..+.. .+.+.+..+...+..+....+. .|..+...|..+
T Consensus 127 lc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l~~~~~~e~~~a~m~lIN~lv~~~~dl~~R~~LR~Ef~~~GL~~ 206 (386)
T 2bnx_A 127 LCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQ 206 (386)
T ss_dssp HHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHHTSTTSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTHHH
T ss_pred HHcCCCCCChHHHHHHHHHHHHHhCchhhHHHHHHHHHcCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCChHH
Confidence 887543 22 22222 23355667777764 4556666666666666655442 233344555555
Q ss_pred HHHHHhCC-CCHHHHHH
Q 010291 133 PLIEMLQS-PDVQLREM 148 (513)
Q Consensus 133 ~L~~~l~~-~~~~~~~~ 148 (513)
.+ ..++. .++.+...
T Consensus 207 il-~~Lr~~~~~~L~~Q 222 (386)
T 2bnx_A 207 VL-QELREIENEDMKVQ 222 (386)
T ss_dssp HH-HHHTTCCCHHHHHH
T ss_pred HH-HHHhccCChhHHHH
Confidence 54 44444 56555443
No 161
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=90.32 E-value=23 Score=38.46 Aligned_cols=143 Identities=12% Similarity=0.080 Sum_probs=82.6
Q ss_pred CCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCC-----CHHHHHHHHHHHHHhhcCChhHHHHHHhCCCh
Q 010291 15 TDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSE-----DSAIHYEAVGVIGNLVHSSPNIKKEVLAAGAL 89 (513)
Q Consensus 15 ~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~-----~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i 89 (513)
.++.....++++++.++..-.+..+.-.-..+++.|+++.... .+.++...+++++..+.--.... .+. ..++
T Consensus 491 ~sW~~lea~~~aigaIag~~~~~~E~~~Lp~vi~~Ll~L~e~~~~kd~k~~vas~i~~vlgrY~~wl~~h~-~~L-~~vl 568 (1073)
T 3gjx_A 491 WSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHW-KFL-KTVV 568 (1073)
T ss_dssp CCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHCHHHHHHCH-HHH-HHHH
T ss_pred CCHHHHhHHHHHHHHHHCcCCcccccchHHHHHHHHhcccccccccchhHHHHHHHHHHHhhhHHHHHhCH-HHH-HHHH
Confidence 3588899999999999853332222122223577777777643 12344445577777653211111 111 1246
Q ss_pred HHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHh--cC----ChHHHHH----HhCCCCHHHHHHHHHHHHHHhhc
Q 010291 90 QPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQ--RG----AVRPLIE----MLQSPDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 90 ~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~--~~----~i~~L~~----~l~~~~~~~~~~a~~~L~~l~~~ 159 (513)
..|++.+...++.++..|+.++..+|..... .++. .| .++.++. ....-.++-...-..+++.+...
T Consensus 569 ~~L~~~m~~~~~~vq~aA~~af~~i~~~C~~---~lv~~~~~e~~p~i~~il~~~~~~~~~l~~~~~~~lyeav~~vi~~ 645 (1073)
T 3gjx_A 569 NKLFEFMHETHDGVQDMACDTFIKIAQKCRR---HFVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGA 645 (1073)
T ss_dssp HHHHHHTTCCSTTHHHHHHHHHHHHHHHTGG---GGTSCCTTCSSCHHHHHHTSHHHHHTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH---HHhhccccccchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 6677777778899999999999999954433 2322 12 2232322 22333566666667777777754
Q ss_pred ccc
Q 010291 160 MHN 162 (513)
Q Consensus 160 ~~~ 162 (513)
-+.
T Consensus 646 ~p~ 648 (1073)
T 3gjx_A 646 QTD 648 (1073)
T ss_dssp CCC
T ss_pred CCC
Confidence 443
No 162
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=89.84 E-value=7.3 Score=42.30 Aligned_cols=234 Identities=12% Similarity=0.050 Sum_probs=134.5
Q ss_pred CHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcC-CChHHHHHHHHHHHHhhcCC----ch
Q 010291 46 ALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSS-CCSESQREAALLLGQFAATD----SD 120 (513)
Q Consensus 46 ~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~-~~~~~~~~a~~~L~~l~~~~----~~ 120 (513)
.+..++..+.+++++.|..|-..|..+-.+ ++ +...+..++.. .++.++..|+.+|.+..... +.
T Consensus 29 ~Le~lv~~ly~p~~~~r~qA~~~L~q~q~s-p~---------aw~~~~~iL~~s~~~~vR~fAa~~L~~~I~~~W~~L~~ 98 (1073)
T 3gjx_A 29 LLDNVVNCLYHGEGAQQRMAQEVLTHLKEH-PD---------AWTRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPR 98 (1073)
T ss_dssp HHHHHHHTTTCSSHHHHHHHHHHHHTSSCC-SC---------HHHHHTCC---CCSHHHHHHHHHHHHHHHHHTGGGSCH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHcC-ch---------HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhhhCCH
Confidence 355666666677888888888888776543 33 34444444543 57899999999999887431 22
Q ss_pred hhHHHHhcCChHHHHHHhCC-----CCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHH
Q 010291 121 CKVHIVQRGAVRPLIEMLQS-----PDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALY 195 (513)
Q Consensus 121 ~~~~~~~~~~i~~L~~~l~~-----~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~ 195 (513)
.....+...++..+...-.. .++.++...+.++..++...-.... ...++.++..+.. ++......+.+|.
T Consensus 99 e~~~~LR~~Ll~~l~~~~~~~~~~e~~~~vinKLa~~La~I~k~~~P~~W---p~fi~dLv~~~~~-~~~~~~~~L~IL~ 174 (1073)
T 3gjx_A 99 NQCEGIKKYVVGLIIKTSSDPTCVEKEKVYIGKLNMILVQILKQEWPKHW---PTFISDIVGASRT-SESLCQNNMVILK 174 (1073)
T ss_dssp HHHHHHHHHHHHHHHHHHTCGGGGTSCHHHHHHHHHHHHHHHHHHTTTTC---TTHHHHHHHHHHH-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCccccccchHHHHHHHHHHHHHHHHhChhhc---cHHHHHHHHHhCC-CHHHHHHHHHHHH
Confidence 22233334455555554433 3567778888888888754322111 2456667776653 4455666777777
Q ss_pred hcccCcc-h-HHHHHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHH-hhcchhhhHHHHHhhcc
Q 010291 196 GLADNED-N-VADFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRV-AEKGVQRRVALALAHLC 272 (513)
Q Consensus 196 ~l~~~~~-~-~~~~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~-~~~~v~~~a~~aL~~l~ 272 (513)
.|+..-. . ...+.. ....-. .+.+.. .-..++..+..+|.. .++++...++.++..+.
T Consensus 175 ~L~EEV~d~~~~~l~~---------------~r~~~l---k~~L~~-~~~~Il~ll~~iL~~~~~~~lv~~~L~~L~~~~ 235 (1073)
T 3gjx_A 175 LLSEEVFDFSSGQITQ---------------VKAKHL---KDSMCN-EFSQIFQLCQFVMENSQNAPLVHATLETLLRFL 235 (1073)
T ss_dssp HHHHHHTTSHHHHBCH---------------HHHHHH---HHHHHH-TCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcccccccH---------------HHHHHH---HHHHHH-HHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHH
Confidence 7765311 0 000000 000000 001111 122344444455544 45667777888998888
Q ss_pred CCCCcceeeecCCchHHH-HhhhcCCCcchhhhHHHHHHHhhhc
Q 010291 273 SPDDQRTIFIDGGGLELL-LGLLGSTNPKQQLDGAVALFKLANK 315 (513)
Q Consensus 273 ~~~~~~~~l~~~~~i~~L-~~ll~~~~~~v~~~a~~~L~~l~~~ 315 (513)
..-+.. .+.+.+.++.| ..++ ++++.+..|+.+|..+...
T Consensus 236 sWI~i~-~i~~~~ll~~L~~~~L--~~~~~r~aA~dcL~eIv~k 276 (1073)
T 3gjx_A 236 NWIPLG-YIFETKLISTLIYKFL--NVPMFRNVSLKCLTEIAGV 276 (1073)
T ss_dssp TTSCTH-HHHSSSHHHHHHHHTS--SSHHHHHHHHHHHHHHHHS
T ss_pred HhcCHH-HhccchHHHHHHHHhc--CChHHHHHHHHHHHHHHhc
Confidence 765422 35566777777 4555 4678999999999998875
No 163
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=89.70 E-value=2.6 Score=37.79 Aligned_cols=136 Identities=12% Similarity=0.021 Sum_probs=88.2
Q ss_pred CHHHHHHHHHHHHHhhcCChhHHHHHH-hCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHh--cCChHHH
Q 010291 58 DSAIHYEAVGVIGNLVHSSPNIKKEVL-AAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQ--RGAVRPL 134 (513)
Q Consensus 58 ~~~v~~~a~~~L~~l~~~~~~~~~~~~-~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~--~~~i~~L 134 (513)
+.+-...|+..|..++.+-...-+.+- +...+..|+ +.....+.+++.|.++++...+.+|+....+.+ ..++..+
T Consensus 41 D~~~le~aLD~L~ElSHDi~~G~KI~~~ef~lL~nL~-~~~~~~~~~rE~aarII~ssLRNNP~Al~~V~~~~p~fv~~l 119 (315)
T 3qml_C 41 DIARLEDSFDRIMEFAHDYKHGYKIITHEFALLANLS-LNENLPLTLRELSTRVITSCLRNNPPVVEFINESFPNFKSKI 119 (315)
T ss_dssp HHHHHHHHHHHHGGGTTSHHHHHHHHHHHHHHHHHHH-HCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHCTTHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhHHhhhHHHhCcHHHHHHHH-hhccCChhHHHHHHHHHHHHHccCHHHHHHHHHhChhHHHHH
Confidence 344567788888888876444433333 323344444 333456789999999999999999988776654 3445555
Q ss_pred HHHhCC-------CCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhcCC--CHHHHHHHHHHHHhcc
Q 010291 135 IEMLQS-------PDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLDSK--NGSLQHNAAFALYGLA 198 (513)
Q Consensus 135 ~~~l~~-------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~--~~~~~~~a~~~L~~l~ 198 (513)
+.-|.. ....++..-+.+|..|..++. .+ ...++..|.+++... ++.++..++..+..+=
T Consensus 120 f~~L~~~~~~~~~~~~~l~KR~LsII~~L~~~~~---~F-~~~~m~~L~~ly~~~~~d~~~k~Kvl~li~d~f 188 (315)
T 3qml_C 120 MAALSNLNDSNHRSSNILIKRYLSILNELPVTSE---DL-PIYSTVVLQNVYERNNKDKQLQIKVLELISKIL 188 (315)
T ss_dssp HHHHHHHHCC--CCCHHHHHHHHHHHHHSCCCST---TC---CCHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccchhHHHHHHHHHHHHHHhcChH---hh-hhccHHHHHHHHccCCCCHHHHHHHHHHHHHHc
Confidence 444322 244677788888888887652 12 234667777777666 8888888888777654
No 164
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=88.48 E-value=30 Score=38.36 Aligned_cols=223 Identities=14% Similarity=0.082 Sum_probs=122.5
Q ss_pred CCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhh--cCCChHHHHHHHHHHHHhhcC-----CchhhHHHHhcC
Q 010291 57 EDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLL--SSCCSESQREAALLLGQFAAT-----DSDCKVHIVQRG 129 (513)
Q Consensus 57 ~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll--~~~~~~~~~~a~~~L~~l~~~-----~~~~~~~~~~~~ 129 (513)
.++..|..|-..|.++-... .+...+...| .+.+..+|..|+..|.+.... +++.+. .+...
T Consensus 25 ~~~~~r~~Ae~~L~~~~~~p----------~~~~~~~~~L~~~s~~~~vR~~A~~~Lk~~I~~~W~~l~~e~k~-~Ir~~ 93 (1204)
T 3a6p_A 25 STQRYRLEALKFCEEFKEKC----------PICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNGMSRLEKV-YLKNS 93 (1204)
T ss_dssp CCHHHHHHHHHHHHHHHHHC----------TTHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHHSGGGSCHHHHH-HHHHH
T ss_pred CChHHHHHHHHHHHHHHhCc----------hHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhcccCCHHHHH-HHHHH
Confidence 36778888888887764332 2333344433 345788999999999988632 233333 23333
Q ss_pred ChHHHHHHhCC---CCHHHHHHHHHHHHHHhhccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcccCcchHHH
Q 010291 130 AVRPLIEMLQS---PDVQLREMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVAD 206 (513)
Q Consensus 130 ~i~~L~~~l~~---~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~ 206 (513)
+++.+...... ..+.++...+.++..++...-.... ...++.|++++.+ ++.....++.+|..++.+-..
T Consensus 94 ll~~l~~~~~~~~~~~~~vr~kla~~la~Ia~~d~p~~W---p~ll~~L~~~~~~-~~~~~e~~L~iL~~L~Eev~~--- 166 (1204)
T 3a6p_A 94 VMELIANGTLNILEEENHIKDALSRIVVEMIKREWPQHW---PDMLIELDTLSKQ-GETQTELVMFILLRLAEDVVT--- 166 (1204)
T ss_dssp HHHHHHHSSCCTTSSCHHHHHHHHHHHHHHHHHHSTTTC---TTHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHT---
T ss_pred HHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCcccc---hHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHcc---
Confidence 44444433211 4578888899999999865422111 2566778888876 555677788888887752100
Q ss_pred HHhhcCcccccchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHH-------------------hhcchhhhHHHH
Q 010291 207 FIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRV-------------------AEKGVQRRVALA 267 (513)
Q Consensus 207 ~~~~g~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lv~lL~~-------------------~~~~v~~~a~~a 267 (513)
.+. +.. ... ...+...... -..++..+..++.. .+..+...++.+
T Consensus 167 ---~~~---~~~-~r~-~~l~~~l~~~--------~~~I~~~~~~iL~~~~~~~~~~~~~~~~~~~~~~~~~l~~~aL~~ 230 (1204)
T 3a6p_A 167 ---FQT---LPP-QRR-RDIQQTLTQN--------MERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNT 230 (1204)
T ss_dssp ---SCC---SCH-HHH-HHHHHHHHHT--------HHHHHHHHHHHHHHHHHHHHHHTTCSTTHHHHHHHHHHHHHHHHH
T ss_pred ---ccc---hHH-HHH-HHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhcccccccchhhhhhhHHHHHHHHHH
Confidence 000 000 000 0000000000 11222333333322 234567778888
Q ss_pred HhhccCCCCcceeeecC--CchHHHHhhhcCCCcchhhhHHHHHHHhhhcc
Q 010291 268 LAHLCSPDDQRTIFIDG--GGLELLLGLLGSTNPKQQLDGAVALFKLANKA 316 (513)
Q Consensus 268 L~~l~~~~~~~~~l~~~--~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~ 316 (513)
+.+....-+... +.+. ..++.+..++. +++++..|+.+|..+....
T Consensus 231 l~~~l~Wi~~~~-i~~~~~~ll~~l~~~l~--~~~lr~~A~ecL~~i~s~~ 278 (1204)
T 3a6p_A 231 LAGYIDWVSMSH-ITAENCKLLEILCLLLN--EQELQLGAAECLLIAVSRK 278 (1204)
T ss_dssp HHTTTTTSCHHH-HHTTTSHHHHHHHHGGG--CTTTHHHHHHHHHHHHTCC
T ss_pred HHHHHhccCHHH-HHhccchHHHHHHHHcC--CHHHHHHHHHHHHHHHhCC
Confidence 887765433211 1122 25666666555 5788999999999998754
No 165
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=87.93 E-value=5.9 Score=35.54 Aligned_cols=146 Identities=12% Similarity=0.129 Sum_probs=94.3
Q ss_pred hHHHHhhccC------CHHHHHHHHHHHHHhhccCchhHHHHHh--cCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCCh
Q 010291 6 PPLVELLEFT------DTKVQRAAAGALRTLAFKNDENKNQIVE--CNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSP 77 (513)
Q Consensus 6 ~~Lv~lL~~~------~~~~~~~a~~~L~~l~~~~~~~~~~i~~--~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~ 77 (513)
..+..+++++ +......|+..|..++. +-+....|+. ...+..|+ +....++.+++.|.++++...++||
T Consensus 25 ~~~r~ll~sg~~~~~~D~~~le~aLD~L~ElSH-Di~~G~KI~~~ef~lL~nL~-~~~~~~~~~rE~aarII~ssLRNNP 102 (315)
T 3qml_C 25 KEMRNIIDSNPTLSSQDIARLEDSFDRIMEFAH-DYKHGYKIITHEFALLANLS-LNENLPLTLRELSTRVITSCLRNNP 102 (315)
T ss_dssp HHHHHHHHHCSSCCHHHHHHHHHHHHHHGGGTT-SHHHHHHHHHHHHHHHHHHH-HCTTSCHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHHHHhhh-hHHhhhHHHhCcHHHHHHHH-hhccCChhHHHHHHHHHHHHHccCH
Confidence 3455667665 34456788889999986 5666666665 23344444 3345677899999999999999999
Q ss_pred hHHHHHHhC--CChHHHHHhhcC-------CChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCC--CHHHH
Q 010291 78 NIKKEVLAA--GALQPVIGLLSS-------CCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSP--DVQLR 146 (513)
Q Consensus 78 ~~~~~~~~~--g~i~~L~~ll~~-------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~--~~~~~ 146 (513)
...+.+.+. ..+..+..-|.. ....+...-+.+|..|....... ....+..|.+++... ++.++
T Consensus 103 ~Al~~V~~~~p~fv~~lf~~L~~~~~~~~~~~~~l~KR~LsII~~L~~~~~~F-----~~~~m~~L~~ly~~~~~d~~~k 177 (315)
T 3qml_C 103 PVVEFINESFPNFKSKIMAALSNLNDSNHRSSNILIKRYLSILNELPVTSEDL-----PIYSTVVLQNVYERNNKDKQLQ 177 (315)
T ss_dssp HHHHHHHHHCTTHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHSCCCSTTC-------CCHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHhChhHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHhcChHhh-----hhccHHHHHHHHccCCCCHHHH
Confidence 988877764 233333332322 23355566677888887543211 134667777777666 88888
Q ss_pred HHHHHHHHHHhh
Q 010291 147 EMSAFALGRLAQ 158 (513)
Q Consensus 147 ~~a~~~L~~l~~ 158 (513)
..++..+..+-.
T Consensus 178 ~Kvl~li~d~f~ 189 (315)
T 3qml_C 178 IKVLELISKILK 189 (315)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHcc
Confidence 888877777653
No 166
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=86.89 E-value=4.8 Score=43.83 Aligned_cols=162 Identities=16% Similarity=0.111 Sum_probs=99.5
Q ss_pred HHHHhhcc----CCHHHHHHHHHHHHHhhcc----CchhHHHHHhcCCHHHHH----HhhcCCCHHHHHHHHHHHHHhhc
Q 010291 7 PLVELLEF----TDTKVQRAAAGALRTLAFK----NDENKNQIVECNALPTLI----LMLRSEDSAIHYEAVGVIGNLVH 74 (513)
Q Consensus 7 ~Lv~lL~~----~~~~~~~~a~~~L~~l~~~----~~~~~~~i~~~g~i~~Lv----~lL~~~~~~v~~~a~~~L~~l~~ 74 (513)
.+..++++ +++.++..++-+++.++.. ++... ...++.+. +.+...+.+-+..++.+|+|+..
T Consensus 395 ~~~~l~~~~~~~~~~~l~~ta~La~gslV~k~c~~~~~c~-----~~~v~~i~~~l~~~~~~~~~~~~~~~LkaLGN~g~ 469 (1056)
T 1lsh_A 395 YARELLNTSFIRNRPILRKTAVLGYGSLVFRYCANTVSCP-----DELLQPLHDLLSQSSDRAKEEEIVLALKALGNAGQ 469 (1056)
T ss_dssp HHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHHTTCSSCC-----GGGTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHhccCCCCC-----HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCC
Confidence 34445544 3566677777777666541 11111 12234444 44456677888899999999964
Q ss_pred CChhHHHHHHhCCChHHHHHhhcC-------CChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHh--CCCCHHH
Q 010291 75 SSPNIKKEVLAAGALQPVIGLLSS-------CCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEML--QSPDVQL 145 (513)
Q Consensus 75 ~~~~~~~~~~~~g~i~~L~~ll~~-------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l--~~~~~~~ 145 (513)
. . .++.|..++.. ....++..|+++|.++....|.. +-+.++++. ...++++
T Consensus 470 p--~---------~l~~l~~~l~~~~~~~~~~~~rvr~aAi~ALr~~~~~~p~~--------v~~il~~i~~n~~e~~Ev 530 (1056)
T 1lsh_A 470 P--N---------SIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKRDPRK--------VQEIVLPIFLNVAIKSEL 530 (1056)
T ss_dssp G--G---------GHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGGTCHHH--------HHHHHHHHHHCTTSCHHH
T ss_pred h--h---------HHHHHHHhhcCccccccccchHHHHHHHHHHHHhhhhchHH--------HHHHHHHHhcCCCCChHH
Confidence 2 2 46667777642 23478889999999998544332 234567777 4568999
Q ss_pred HHHHHHHHHHHhhccccchhhHhcCChHHHHHHhcC-CCHHHHHHHHHHHHhcccCc
Q 010291 146 REMSAFALGRLAQDMHNQAGIAHNGGLVPLLKLLDS-KNGSLQHNAAFALYGLADNE 201 (513)
Q Consensus 146 ~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~-~~~~~~~~a~~~L~~l~~~~ 201 (513)
|..|+..|..-. +... .+..+...+.. ++..+.......|.+++...
T Consensus 531 RiaA~~~Lm~t~---P~~~------~l~~ia~~l~~E~~~QV~sfv~S~l~sla~s~ 578 (1056)
T 1lsh_A 531 RIRSCIVFFESK---PSVA------LVSMVAVRLRREPNLQVASFVYSQMRSLSRSS 578 (1056)
T ss_dssp HHHHHHHHHHTC---CCHH------HHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHC---cCHH------HHHHHHHHHhhCchHHHHHHHHHHHHHHHhcC
Confidence 988888775421 2211 23344555544 56777777788888887744
No 167
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=86.39 E-value=0.65 Score=34.85 Aligned_cols=32 Identities=9% Similarity=0.294 Sum_probs=30.2
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q 010291 443 ISLENVSSMYELSEAFHAISLRHTCILYIMEH 474 (513)
Q Consensus 443 ~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 474 (513)
++.+|+..++..|+.|+++.|.+.|.+|+.++
T Consensus 77 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 77 LEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 67899999999999999999999999999876
No 168
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=85.72 E-value=7.8 Score=42.24 Aligned_cols=124 Identities=14% Similarity=0.156 Sum_probs=86.9
Q ss_pred HhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcC-------CCHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 10 ELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRS-------EDSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 10 ~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~-------~~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
+.++..+.+.+..++++|+|+... ..++.|.+++.. ....+|..|+++|.+++...+..
T Consensus 447 ~~~~~~~~~~~~~~LkaLGN~g~p-----------~~l~~l~~~l~~~~~~~~~~~~rvr~aAi~ALr~~~~~~p~~--- 512 (1056)
T 1lsh_A 447 QSSDRAKEEEIVLALKALGNAGQP-----------NSIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKRDPRK--- 512 (1056)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTCG-----------GGHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGGTCHHH---
T ss_pred HHHhcCChHHHHHHHHHhhccCCh-----------hHHHHHHHhhcCccccccccchHHHHHHHHHHHHhhhhchHH---
Confidence 344566777788899999999852 356777777742 24578899999999998654432
Q ss_pred HHhCCChHHHHHhh--cCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCC-CCHHHHHHHHHHHHHHhhc
Q 010291 83 VLAAGALQPVIGLL--SSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQS-PDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 83 ~~~~g~i~~L~~ll--~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~-~~~~~~~~a~~~L~~l~~~ 159 (513)
+-+.+.++. ...++++|..|...|..-. |.. ..+..+...+.. ++.++.......|.+++..
T Consensus 513 -----v~~il~~i~~n~~e~~EvRiaA~~~Lm~t~---P~~-------~~l~~ia~~l~~E~~~QV~sfv~S~l~sla~s 577 (1056)
T 1lsh_A 513 -----VQEIVLPIFLNVAIKSELRIRSCIVFFESK---PSV-------ALVSMVAVRLRREPNLQVASFVYSQMRSLSRS 577 (1056)
T ss_dssp -----HHHHHHHHHHCTTSCHHHHHHHHHHHHHTC---CCH-------HHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTC
T ss_pred -----HHHHHHHHhcCCCCChHHHHHHHHHHHHHC---cCH-------HHHHHHHHHHhhCchHHHHHHHHHHHHHHHhc
Confidence 234466666 3467899988887775432 332 135566666665 6899999999999999976
Q ss_pred ccc
Q 010291 160 MHN 162 (513)
Q Consensus 160 ~~~ 162 (513)
...
T Consensus 578 ~~P 580 (1056)
T 1lsh_A 578 SNP 580 (1056)
T ss_dssp CSG
T ss_pred CCc
Confidence 543
No 169
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=84.05 E-value=28 Score=32.64 Aligned_cols=140 Identities=14% Similarity=0.146 Sum_probs=90.9
Q ss_pred HHHHhhcc---CCHHHHHHHHHHHHHhhcc-CchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 7 PLVELLEF---TDTKVQRAAAGALRTLAFK-NDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 7 ~Lv~lL~~---~~~~~~~~a~~~L~~l~~~-~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
.++++|+. .....+...+.-+..+..+ ++. .-.++++.++++-.+++.++|+..+..|...+....+..
T Consensus 26 ~v~~lln~A~~~~~~~Kl~~L~q~~EL~l~~dps-----Ll~~fl~~il~f~~d~~~~vRk~~a~FieEa~~~~~el~-- 98 (386)
T 3o2t_A 26 RVVDLLNQAALITNDSKITVLKQVQELIINKDPT-----LLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELL-- 98 (386)
T ss_dssp HHHHHHHHHHHCCSTHHHHHHHHHHHHHHTTCGG-----GGGGGHHHHHGGGGCSCHHHHHHHHHHHHHHHHHCGGGH--
T ss_pred HHHHHHHhhhccChHHHHHHHHHHHHHHhccCHH-----HHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHH--
Confidence 45555542 1224677777777776542 232 224578888888888899999999999999886544432
Q ss_pred HHhCCChHHHHHhhcCCChHHHHHHHHHHHHhh--------cCCc-----hhhHHHHhcCChHHHHHHhCCCCHHHHHHH
Q 010291 83 VLAAGALQPVIGLLSSCCSESQREAALLLGQFA--------ATDS-----DCKVHIVQRGAVRPLIEMLQSPDVQLREMS 149 (513)
Q Consensus 83 ~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~--------~~~~-----~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a 149 (513)
..+++.|..++++.++.+.+.++.+..++- .... +.....+ ..+-..++.++.+.+..++..|
T Consensus 99 ---~~~l~~L~~LL~d~d~~V~K~~I~~~tslYpl~f~~i~~~~~~~~~~e~~W~~m-~~lK~~Il~~~ds~n~GVrl~a 174 (386)
T 3o2t_A 99 ---LKLIANLNMLLRDENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMV-SAMAGDIILLLDSDNDGIRTHA 174 (386)
T ss_dssp ---HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHH-HHHHHHHHHGGGCSSHHHHHHH
T ss_pred ---HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHH-HHHHHHHHHHhccCCcchHHHH
Confidence 235778888898889999888887766654 1111 0111111 1223445666777888899888
Q ss_pred HHHHHHHh
Q 010291 150 AFALGRLA 157 (513)
Q Consensus 150 ~~~L~~l~ 157 (513)
+..+..+.
T Consensus 175 iKFle~VI 182 (386)
T 3o2t_A 175 IKFVEGLI 182 (386)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88777765
No 170
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.32 E-value=1.1 Score=33.34 Aligned_cols=68 Identities=10% Similarity=-0.008 Sum_probs=47.4
Q ss_pred CccccCHHHHHHHHHHHHHhcHHHHHHHHHHHHHhcC------------ChhhHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q 010291 407 GSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDI------------SLENVSSMYELSEAFHAISLRHTCILYIMEH 474 (513)
Q Consensus 407 ~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~------------~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 474 (513)
+.-.++.+|...++.+|+.|+++.|.+.|.+|+.+++ +.+....++.- +.-+-..+.+.+++|+..+
T Consensus 4 ~~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~s-dv~~E~~vf~av~~Wv~~d 82 (105)
T 2eqx_A 4 GSSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISD-GVPCSQNPTEAIEAWINFN 82 (105)
T ss_dssp CCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHT-CEETTSCHHHHHHHHHHTT
T ss_pred hhccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcC-CCCCHHHHHHHHHHHHHcC
Confidence 3445788999999999999999999999999998754 23333333332 2223345777788887644
Q ss_pred H
Q 010291 475 F 475 (513)
Q Consensus 475 ~ 475 (513)
.
T Consensus 83 ~ 83 (105)
T 2eqx_A 83 K 83 (105)
T ss_dssp H
T ss_pred H
Confidence 3
No 171
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=80.28 E-value=39 Score=31.68 Aligned_cols=105 Identities=13% Similarity=0.119 Sum_probs=73.0
Q ss_pred CChhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 3 GGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 3 g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
..++.++++-.+++.++|...+..|...+....+... .+++.|..+|+++++.+.+.++.+..++- +..-+.
T Consensus 63 ~fl~~il~f~~d~~~~vRk~~a~FieEa~~~~~el~~-----~~l~~L~~LL~d~d~~V~K~~I~~~tslY---pl~f~~ 134 (386)
T 3o2t_A 63 NFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLL-----KLIANLNMLLRDENVNVVKKAILTMTQLY---KVALQW 134 (386)
T ss_dssp GGHHHHHGGGGCSCHHHHHHHHHHHHHHHHHCGGGHH-----HHHHHHHHHHTCSSHHHHHHHHHHHHHHH---HHHHHH
T ss_pred HHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHcCCCHHHHHHHHHHHHHHH---HHHHHH
Confidence 4567778877778899999999999988874444322 24678888888889999999888777763 222222
Q ss_pred HHhCCC---------------hHHHHHhhcCCChHHHHHHHHHHHHhh
Q 010291 83 VLAAGA---------------LQPVIGLLSSCCSESQREAALLLGQFA 115 (513)
Q Consensus 83 ~~~~g~---------------i~~L~~ll~~~~~~~~~~a~~~L~~l~ 115 (513)
++..+. -..++.++++.+..++..+...+..+.
T Consensus 135 i~~~~~~~~~~e~~W~~m~~lK~~Il~~~ds~n~GVrl~aiKFle~VI 182 (386)
T 3o2t_A 135 MVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIRTHAIKFVEGLI 182 (386)
T ss_dssp HHHC-CCCHHHHHHHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHH
T ss_pred HhcCCCcchhHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHH
Confidence 232222 234566677788888888888777755
No 172
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=78.38 E-value=41 Score=37.26 Aligned_cols=128 Identities=11% Similarity=0.023 Sum_probs=79.1
Q ss_pred CHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhh--cCCCHHHHHHHHHHHHHhhcC-----ChhHHHHHHhCCC
Q 010291 16 DTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILML--RSEDSAIHYEAVGVIGNLVHS-----SPNIKKEVLAAGA 88 (513)
Q Consensus 16 ~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL--~~~~~~v~~~a~~~L~~l~~~-----~~~~~~~~~~~g~ 88 (513)
++..|..|-..|..+-. ++ .+...+...| .+.+..+|..|+..|.+.... +++.+..+ ....
T Consensus 26 ~~~~r~~Ae~~L~~~~~-~p---------~~~~~~~~~L~~~s~~~~vR~~A~~~Lk~~I~~~W~~l~~e~k~~I-r~~l 94 (1204)
T 3a6p_A 26 TQRYRLEALKFCEEFKE-KC---------PICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNGMSRLEKVYL-KNSV 94 (1204)
T ss_dssp CHHHHHHHHHHHHHHHH-HC---------TTHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHHSGGGSCHHHHHHH-HHHH
T ss_pred ChHHHHHHHHHHHHHHh-Cc---------hHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhcccCCHHHHHHH-HHHH
Confidence 56678888888877654 22 2344444433 356789999999999988643 23333333 2233
Q ss_pred hHHHHHhhcC---CChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHhhc
Q 010291 89 LQPVIGLLSS---CCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 89 i~~L~~ll~~---~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~ 159 (513)
+..+...-.. ....++...+.++..++..+-.... .++++.++.+++. ++..++.+..+|..++.+
T Consensus 95 l~~l~~~~~~~~~~~~~vr~kla~~la~Ia~~d~p~~W----p~ll~~L~~~~~~-~~~~~e~~L~iL~~L~Ee 163 (1204)
T 3a6p_A 95 MELIANGTLNILEEENHIKDALSRIVVEMIKREWPQHW----PDMLIELDTLSKQ-GETQTELVMFILLRLAED 163 (1204)
T ss_dssp HHHHHHSSCCTTSSCHHHHHHHHHHHHHHHHHHSTTTC----TTHHHHHHHHHHT-CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccccccccHHHHHHHHHHHHHHHHHhCcccc----hHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHH
Confidence 4443332211 3577888888888888744211111 3567788888866 556788899999998753
No 173
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=77.42 E-value=3.3 Score=32.68 Aligned_cols=69 Identities=7% Similarity=0.038 Sum_probs=51.1
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhccC-chhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhh
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFKN-DENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLV 73 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~-~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~ 73 (513)
+..+...|+++++.++..|+..|-.+..+. ......+.....+..++.++...++.|+..++..+..-+
T Consensus 44 ~rai~Krl~~~n~~~ql~AL~LLe~~vkNcG~~f~~evas~~Fl~el~~l~~~~~~~Vk~kil~li~~W~ 113 (140)
T 3ldz_A 44 LRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEVSNVLNKGHPKVCEKLKALMVEWT 113 (140)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 455666678889999999998888887642 344555666667777788777778889888888776665
No 174
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=76.79 E-value=4 Score=33.16 Aligned_cols=69 Identities=4% Similarity=0.030 Sum_probs=53.0
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhcc-CchhHHHHHhcCCHHHHHHhhcC-CCHHHHHHHHHHHHHhh
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFK-NDENKNQIVECNALPTLILMLRS-EDSAIHYEAVGVIGNLV 73 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~-~~~~~~~i~~~g~i~~Lv~lL~~-~~~~v~~~a~~~L~~l~ 73 (513)
+..|...|+++++.++..|+..|-.+..+ .......+.....+..++.++.. .++.|+..++..+..-+
T Consensus 54 ~ral~krl~~~n~~vql~AL~LLd~~vkNcG~~Fh~evas~~Fl~el~~l~~~~~~~~Vk~kil~li~~W~ 124 (163)
T 1x5b_A 54 LKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWS 124 (163)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHTCHHHHHHHTSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHccCCCHHHHHHHHHHHHHHH
Confidence 45566777889999999999998888875 34566677777778888888874 57889988888776655
No 175
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=75.99 E-value=5 Score=31.96 Aligned_cols=71 Identities=11% Similarity=0.067 Sum_probs=56.4
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhcc-CchhHHHHHhcCCHHHHHHhhcC------CCHHHHHHHHHHHHHhhc
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAFK-NDENKNQIVECNALPTLILMLRS------EDSAIHYEAVGVIGNLVH 74 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~-~~~~~~~i~~~g~i~~Lv~lL~~------~~~~v~~~a~~~L~~l~~ 74 (513)
++..|..-|+++++.++..|+..|-.+..+ .......+.....+..|+.++.. .+..|+..++..+..-+.
T Consensus 39 a~rai~krl~~~n~~vql~AL~LLe~~vkNCG~~fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~ 116 (148)
T 1mhq_A 39 APWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTV 116 (148)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHHH
Confidence 345677778899999999999999988875 35666777778888889988863 367899998888877664
No 176
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=74.48 E-value=2.5 Score=32.57 Aligned_cols=32 Identities=13% Similarity=0.204 Sum_probs=29.3
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q 010291 443 ISLENVSSMYELSEAFHAISLRHTCILYIMEH 474 (513)
Q Consensus 443 ~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 474 (513)
++.+|+..++..|+.|+.+.|.+.|.+|+.++
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 57889999999999999999999999998753
No 177
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=73.53 E-value=1.4 Score=34.57 Aligned_cols=36 Identities=6% Similarity=0.015 Sum_probs=28.8
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHh
Q 010291 443 ISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKL 478 (513)
Q Consensus 443 ~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~~ 478 (513)
++.+|+..++..|+.|+.+.|.+.|.+|+.+++..-
T Consensus 87 i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 87 LTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 678999999999999999999999999998887653
No 178
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=71.90 E-value=7.4 Score=30.98 Aligned_cols=70 Identities=10% Similarity=0.054 Sum_probs=54.3
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhcc-CchhHHHHHhcCCHHHHHHhhcC------CCHHHHHHHHHHHHHhhc
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFK-NDENKNQIVECNALPTLILMLRS------EDSAIHYEAVGVIGNLVH 74 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~-~~~~~~~i~~~g~i~~Lv~lL~~------~~~~v~~~a~~~L~~l~~ 74 (513)
+..|..-++++++.++..|+..|-.+..+ .......+....++..|+.++.. .++.|+..++..+..-+.
T Consensus 50 ~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~~fh~eias~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~ 126 (149)
T 3g2s_A 50 TRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTV 126 (149)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHHHH
Confidence 45667778889999999999998888774 33455667777788888888863 468899998888877764
No 179
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=71.88 E-value=3.1 Score=31.46 Aligned_cols=30 Identities=10% Similarity=0.193 Sum_probs=28.0
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHHH
Q 010291 443 ISLENVSSMYELSEAFHAISLRHTCILYIM 472 (513)
Q Consensus 443 ~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~ 472 (513)
++.+|+..++..|+.|+.+.|.+.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 678899999999999999999999999974
No 180
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=71.84 E-value=4.8 Score=30.66 Aligned_cols=32 Identities=13% Similarity=0.229 Sum_probs=29.5
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q 010291 443 ISLENVSSMYELSEAFHAISLRHTCILYIMEH 474 (513)
Q Consensus 443 ~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 474 (513)
++.+|+..++..|+.|+.+.|.+.|.+|+.+.
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 57889999999999999999999999998763
No 181
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=71.69 E-value=2.1 Score=32.60 Aligned_cols=32 Identities=6% Similarity=0.088 Sum_probs=27.6
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q 010291 443 ISLENVSSMYELSEAFHAISLRHTCILYIMEH 474 (513)
Q Consensus 443 ~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 474 (513)
++.+|+..++..|+.|+.+.|.+.|.+|+.++
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 67889999999999999999999999998765
No 182
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=71.62 E-value=4 Score=31.04 Aligned_cols=30 Identities=17% Similarity=0.257 Sum_probs=28.0
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHHH
Q 010291 443 ISLENVSSMYELSEAFHAISLRHTCILYIM 472 (513)
Q Consensus 443 ~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~ 472 (513)
++.+|+..++..|+.|+.+.|.+.|.+|+.
T Consensus 88 i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 88 LSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 678899999999999999999999999974
No 183
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=70.22 E-value=6 Score=32.38 Aligned_cols=70 Identities=10% Similarity=0.073 Sum_probs=54.8
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhcc-CchhHHHHHhcCCHHHHHHhhcC------CCHHHHHHHHHHHHHhhc
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFK-NDENKNQIVECNALPTLILMLRS------EDSAIHYEAVGVIGNLVH 74 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~-~~~~~~~i~~~g~i~~Lv~lL~~------~~~~v~~~a~~~L~~l~~ 74 (513)
+..|.+.|+++++.++..|+..|-.+..+ .......+.....+..|+.++.. .+..|+..++..+..-+.
T Consensus 52 ~ral~krl~~~n~~vql~AL~LLd~~vkNCG~~Fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~ 128 (171)
T 1juq_A 52 VRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTM 128 (171)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHHH
Confidence 45667778889999999999999988875 24566677777888888888862 357899999888877664
No 184
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=69.49 E-value=6.9 Score=33.77 Aligned_cols=71 Identities=8% Similarity=0.160 Sum_probs=52.9
Q ss_pred ChhHHHHhhccCCHHHHHHHHHHHHHhhcc-CchhHHHHHhcCCHHHHHHhhc-CCCHHHHHHHHHHHHHhhc
Q 010291 4 GIPPLVELLEFTDTKVQRAAAGALRTLAFK-NDENKNQIVECNALPTLILMLR-SEDSAIHYEAVGVIGNLVH 74 (513)
Q Consensus 4 ~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~-~~~~~~~i~~~g~i~~Lv~lL~-~~~~~v~~~a~~~L~~l~~ 74 (513)
++..|..-|+++++.++..|+..|-.+..+ .......+.....+..|..+++ ..++.|+..++..+..-+.
T Consensus 46 a~ral~krl~~~n~~v~l~aL~LLe~~vkNcG~~f~~eias~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~ 118 (226)
T 3zyq_A 46 AVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAH 118 (226)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCHHHHHHHSSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcchHHHHhhccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 345667777889999999999988888874 3345666666677777777776 4577888888888776653
No 185
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=67.59 E-value=64 Score=28.27 Aligned_cols=103 Identities=9% Similarity=0.135 Sum_probs=69.1
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHH
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVL 84 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~ 84 (513)
++.++.+-.+++.++|...+..|...+...++... ..++.|..+|+++++.+.+.++.+..++- +..-+.+.
T Consensus 55 l~~il~~~~~~~~~vrk~~~~Fi~e~~~~k~~l~~-----~~l~~L~~Ll~d~d~~V~K~~I~~~~~iY---~~~l~~i~ 126 (257)
T 3gs3_A 55 LESVLSLAHDSNMEVRKQVVAFVEQVCKVKVELLP-----HVINVVSMLLRDNSAQVIKRVIQACGSIY---KNGLQYLC 126 (257)
T ss_dssp HHHHHGGGGCSCHHHHHHHHHHHHHHHHHCGGGHH-----HHHHHHHHHTTCSCHHHHHHHHHHHHHHH---HHHHHHHT
T ss_pred HHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHcCCCHHHHHHHHHHHHHHH---HHHHHHHh
Confidence 45556655567788999999999888864443322 24778888888889999999887766663 11112222
Q ss_pred hCC---------------ChHHHHHhhcCCChHHHHHHHHHHHHhh
Q 010291 85 AAG---------------ALQPVIGLLSSCCSESQREAALLLGQFA 115 (513)
Q Consensus 85 ~~g---------------~i~~L~~ll~~~~~~~~~~a~~~L~~l~ 115 (513)
..+ .-..++...++.+..++..+...+..+.
T Consensus 127 ~~~~~~~~~~~~W~~m~~lK~~Il~~~~s~n~gvkl~~iKF~e~vI 172 (257)
T 3gs3_A 127 SLMEPGDSAEQAWNILSLIKAQILDMIDNENDGIRTNAIKFLEGVV 172 (257)
T ss_dssp TSSSCCHHHHHHHHHHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHH
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHH
Confidence 222 2345566677788889988888777755
No 186
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=67.39 E-value=6.4 Score=29.83 Aligned_cols=29 Identities=17% Similarity=0.359 Sum_probs=27.3
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHH
Q 010291 443 ISLENVSSMYELSEAFHAISLRHTCILYI 471 (513)
Q Consensus 443 ~~~~n~~~~~~~a~~~~~~~L~~~~~~~i 471 (513)
++.+|+..++..|+.|+.+.|.+.|.+|+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 57889999999999999999999999986
No 187
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=67.20 E-value=3.4 Score=40.89 Aligned_cols=83 Identities=12% Similarity=0.139 Sum_probs=59.2
Q ss_pred ccEEEEecCeeehhhHHHHhhcCHHHHHhccCC-----CCCCCCCceecCCCCHHHHHHHHHHHhc-CccccCHH-HHHH
Q 010291 346 SDVTFLVEGRRFYAHRICLLASSDAFRAMFDGG-----YREKDARDIEIPNIRWEVFELMMRFIYT-GSVDVTLD-IAQD 418 (513)
Q Consensus 346 ~Dv~~~~~~~~~~~h~~il~~~s~~f~~~~~~~-----~~e~~~~~i~l~~~~~~~~~~~l~~~Y~-~~~~~~~~-~~~~ 418 (513)
.-|.+.|||..|...+..|... -..++... +-....+++-+ |=++..|+.+|+|+.+ |++..+.+ ....
T Consensus 52 ~~v~lNVgG~~f~t~~~tL~~~---p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~ 127 (514)
T 2r9r_B 52 ERVVINISGLRFETQLKTLAQF---PETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNVPLDI 127 (514)
T ss_dssp CEEEEEETTEEEEEEHHHHTTS---TTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTSCHHH
T ss_pred CEEEEEeCCEEEEecHHHHhcC---CCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCcccHHH
Confidence 4688899999999999988743 22233221 11123345555 4599999999999999 99876654 3567
Q ss_pred HHHHHHHhcHHHHH
Q 010291 419 LLRAADQYLLEGLK 432 (513)
Q Consensus 419 ll~~A~~~~~~~l~ 432 (513)
+.+-|++|+++++.
T Consensus 128 ~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 128 FSEEIRFYELGEEA 141 (514)
T ss_dssp HHHHHHHTTCCHHH
T ss_pred HHHHHHhcCCCHHH
Confidence 88999999997754
No 188
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=66.03 E-value=1.4 Score=34.66 Aligned_cols=33 Identities=18% Similarity=0.411 Sum_probs=30.4
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Q 010291 443 ISLENVSSMYELSEAFHAISLRHTCILYIMEHF 475 (513)
Q Consensus 443 ~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~ 475 (513)
++.+|+..++..|+.|+.+.|.+.|.+|+.+++
T Consensus 101 i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 101 LSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKF 133 (138)
T ss_dssp CCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 678999999999999999999999999997654
No 189
>3gae_A Protein DOA1; UFD3, CDC48, armadillo repeat, nucleus, phosphoprotein, UBL conjugation pathway, WD repeat, nuclear protein; 1.60A {Saccharomyces cerevisiae}
Probab=65.92 E-value=5 Score=35.37 Aligned_cols=104 Identities=10% Similarity=0.100 Sum_probs=65.8
Q ss_pred ccCCHHHHHHHHHHHHHhhccCch-hHHHHHhcCCHHHHHHhhc--------CCCHHHHHHHHHHHHHhhcCChhHHHHH
Q 010291 13 EFTDTKVQRAAAGALRTLAFKNDE-NKNQIVECNALPTLILMLR--------SEDSAIHYEAVGVIGNLVHSSPNIKKEV 83 (513)
Q Consensus 13 ~~~~~~~~~~a~~~L~~l~~~~~~-~~~~i~~~g~i~~Lv~lL~--------~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 83 (513)
.+.++..+..+++++.|+-. ++. .+..+........+++.+. .++..++..++..+.|++......+.
T Consensus 100 ~~~~~~~~ml~lR~l~NlF~-~~~~g~~l~~~~~~~~~i~~~i~~~~~~~~~~~~~nl~iA~ATl~~N~av~~~~~~~-- 176 (253)
T 3gae_A 100 GNKNITLTMLTVRILVNCFN-NENWGVKLLESNQVYKSIFETIDTEFSQASAKQSQNLAIAVSTLIFNYSALVTKGNS-- 176 (253)
T ss_dssp TCSSHHHHHHHHHHHHHHTT-CTTTHHHHHTSHHHHTTHHHHSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHHTSCS--
T ss_pred CCCchhHHHHHHHHHHHccc-CCchHHHHHhcchhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHhhccc--
Confidence 34567899999999999997 444 4555544323344444332 13678899999999999853211110
Q ss_pred HhCCChHHHHHhhcC---------CChHHHHHHHHHHHHhhcCCch
Q 010291 84 LAAGALQPVIGLLSS---------CCSESQREAALLLGQFAATDSD 120 (513)
Q Consensus 84 ~~~g~i~~L~~ll~~---------~~~~~~~~a~~~L~~l~~~~~~ 120 (513)
+......++..+.. .+++..+.++-+|+++...++.
T Consensus 177 -~~e~~~~l~~~i~~~~~~~e~~~~d~Ea~yR~LvAlGtL~~~~~~ 221 (253)
T 3gae_A 177 -DLELLPIVADAINTKYGPLEEYQECEEAAYRLTVAYGNLATVEPT 221 (253)
T ss_dssp -CTTHHHHHHHHHHTTTTTSHHHHHSHHHHHHHHHHHHHHHHHSGG
T ss_pred -hHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHHHhCcHH
Confidence 12233445555442 3778899999999999865544
No 190
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=65.72 E-value=29 Score=27.14 Aligned_cols=69 Identities=7% Similarity=0.099 Sum_probs=53.4
Q ss_pred ChHHHHHHhCCCCHHHHHHHHHHHHHHhhcccc--chhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhcc
Q 010291 130 AVRPLIEMLQSPDVQLREMSAFALGRLAQDMHN--QAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLA 198 (513)
Q Consensus 130 ~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~--~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~ 198 (513)
++..+.+.+++.++.++..|+..|-.+..+... ...+.....++.+.+++...++.++..++..+..-+
T Consensus 43 a~rai~Krl~~~n~~~ql~AL~LLe~~vkNcG~~f~~evas~~Fl~el~~l~~~~~~~Vk~kil~li~~W~ 113 (140)
T 3ldz_A 43 CLRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEVSNVLNKGHPKVCEKLKALMVEWT 113 (140)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 466788889999999999999999888876543 444555566777888887778889888888877654
No 191
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=63.21 E-value=13 Score=30.00 Aligned_cols=69 Identities=3% Similarity=0.042 Sum_probs=52.7
Q ss_pred ChHHHHHHhCCCCHHHHHHHHHHHHHHhhcccc--chhhHhcCChHHHHHHhcC-CCHHHHHHHHHHHHhcc
Q 010291 130 AVRPLIEMLQSPDVQLREMSAFALGRLAQDMHN--QAGIAHNGGLVPLLKLLDS-KNGSLQHNAAFALYGLA 198 (513)
Q Consensus 130 ~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~--~~~~~~~~~i~~L~~ll~~-~~~~~~~~a~~~L~~l~ 198 (513)
++..|.+.|++.++.++..|+..|-.+..+... +..+.....++.|++++.. .++.++..++..+..-+
T Consensus 53 A~ral~krl~~~n~~vql~AL~LLd~~vkNcG~~Fh~evas~~Fl~el~~l~~~~~~~~Vk~kil~li~~W~ 124 (163)
T 1x5b_A 53 CLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWS 124 (163)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHTCHHHHHHHTSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHccCCCHHHHHHHHHHHHHHH
Confidence 466788899999999999999999998876433 4556666677778888875 56788888888776544
No 192
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=62.77 E-value=7.6 Score=19.15 Aligned_cols=22 Identities=9% Similarity=0.158 Sum_probs=18.2
Q ss_pred HHHHHHHHhcCcHHHHHHHHHH
Q 010291 449 SSMYELSEAFHAISLRHTCILY 470 (513)
Q Consensus 449 ~~~~~~a~~~~~~~L~~~~~~~ 470 (513)
+..+-+|.++..++|...|++-
T Consensus 2 ckvmcyaqrhsspellrrcldn 23 (26)
T 2plx_B 2 CKVMCYAQRHSSPELLRRCLDN 23 (26)
T ss_dssp HHHHHHHBCCCCHHHHHHHHHH
T ss_pred ceEEeehhhcCCHHHHHHHHhc
Confidence 3567789999999999999864
No 193
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=62.34 E-value=15 Score=29.23 Aligned_cols=69 Identities=19% Similarity=0.149 Sum_probs=54.9
Q ss_pred ChHHHHHHhCCCCHHHHHHHHHHHHHHhhccc--cchhhHhcCChHHHHHHhcC------CCHHHHHHHHHHHHhcc
Q 010291 130 AVRPLIEMLQSPDVQLREMSAFALGRLAQDMH--NQAGIAHNGGLVPLLKLLDS------KNGSLQHNAAFALYGLA 198 (513)
Q Consensus 130 ~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~--~~~~~~~~~~i~~L~~ll~~------~~~~~~~~a~~~L~~l~ 198 (513)
++..+.+.++++++.++..|+..|-.+..+.. .+..+.....+..|++++.. .+..++..++..+..-+
T Consensus 39 a~rai~krl~~~n~~vql~AL~LLe~~vkNCG~~fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~ 115 (148)
T 1mhq_A 39 APWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWT 115 (148)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHH
Confidence 46788889999999999999999999987654 35666677788889988864 36788888888776654
No 194
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=61.35 E-value=5.4 Score=32.52 Aligned_cols=34 Identities=21% Similarity=0.168 Sum_probs=30.3
Q ss_pred cCHHHHHHHHHHHHHhcHHHHHHHHHHHHHhcCC
Q 010291 411 VTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDIS 444 (513)
Q Consensus 411 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~ 444 (513)
++.+++.+++..|+.|+.+.|++.|.+++.+++.
T Consensus 132 l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~ 165 (172)
T 3htm_A 132 LSVENAAEILILADLHSADQLKTQAVDFINYHAT 165 (172)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999988653
No 195
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=59.75 E-value=45 Score=26.03 Aligned_cols=81 Identities=6% Similarity=0.016 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhcCccc---cCHHHHHHHHHHHHHhcH---------------HHHHHHHHHHHHhcCChhhHHHHHHHHH
Q 010291 395 EVFELMMRFIYTGSVD---VTLDIAQDLLRAADQYLL---------------EGLKRLCEYTIAQDISLENVSSMYELSE 456 (513)
Q Consensus 395 ~~~~~~l~~~Y~~~~~---~~~~~~~~ll~~A~~~~~---------------~~l~~~c~~~l~~~~~~~n~~~~~~~a~ 456 (513)
..++.+++-.-.+.++ ++...+..+++.+.+..- ..+..--.+|+ .++.+++..++..|.
T Consensus 25 ~~ik~ml~~~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~--~vd~~~l~eLi~AAn 102 (141)
T 1fs1_B 25 VTIKTMLEDLGMDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL--KVDQGTLFELILAAN 102 (141)
T ss_dssp HHHHHHHHHTCCSSEECTTCCHHHHHHHHHHHHHHTTCC-----------------HHHHHHT--CSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHH--hCCHHHHHHHHHHHH
Confidence 4556665532123343 467778888888887761 12222233344 378999999999999
Q ss_pred hcCcHHHHHHHHHHHHHHHHH
Q 010291 457 AFHAISLRHTCILYIMEHFDK 477 (513)
Q Consensus 457 ~~~~~~L~~~~~~~i~~~~~~ 477 (513)
..+...|.+.|.++++..++.
T Consensus 103 yL~I~~Lldl~c~~vA~~ikg 123 (141)
T 1fs1_B 103 YLDIKGLLDVTCKTVANMIKG 123 (141)
T ss_dssp HHTCHHHHHHHHHHHHHHHTT
T ss_pred HHhhhHHHHHHHHHHHHHHcC
Confidence 999999999999999987654
No 196
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=58.52 E-value=28 Score=27.56 Aligned_cols=73 Identities=10% Similarity=-0.006 Sum_probs=55.7
Q ss_pred ChHHHHHhhcCCChHHHHHHHHHHHHhhcCCc-hhhHHHHhcCChHHHHHHhCC------CCHHHHHHHHHHHHHHhhcc
Q 010291 88 ALQPVIGLLSSCCSESQREAALLLGQFAATDS-DCKVHIVQRGAVRPLIEMLQS------PDVQLREMSAFALGRLAQDM 160 (513)
Q Consensus 88 ~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~-~~~~~~~~~~~i~~L~~~l~~------~~~~~~~~a~~~L~~l~~~~ 160 (513)
++..|..-+.+.++.++..|+..|..+...+. .....+....++..|++++.. .++.|+..++..+...+...
T Consensus 49 a~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~~fh~eias~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f 128 (149)
T 3g2s_A 49 ATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVGL 128 (149)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHHHHHh
Confidence 45667777788899999999988888874443 334566677788999999974 47889999999998887543
No 197
>3gae_A Protein DOA1; UFD3, CDC48, armadillo repeat, nucleus, phosphoprotein, UBL conjugation pathway, WD repeat, nuclear protein; 1.60A {Saccharomyces cerevisiae}
Probab=57.66 E-value=25 Score=30.87 Aligned_cols=104 Identities=9% Similarity=0.042 Sum_probs=63.5
Q ss_pred CCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcC--------CChHHHHHHHHHHHHhhcCCchhhHHHHh
Q 010291 56 SEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSS--------CCSESQREAALLLGQFAATDSDCKVHIVQ 127 (513)
Q Consensus 56 ~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~--------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~ 127 (513)
+.++..+..+++++.|+..+....++.+........++..+.+ .+..++..++..+.|++......+. +
T Consensus 101 ~~~~~~~ml~lR~l~NlF~~~~~g~~l~~~~~~~~~i~~~i~~~~~~~~~~~~~nl~iA~ATl~~N~av~~~~~~~---~ 177 (253)
T 3gae_A 101 NKNITLTMLTVRILVNCFNNENWGVKLLESNQVYKSIFETIDTEFSQASAKQSQNLAIAVSTLIFNYSALVTKGNS---D 177 (253)
T ss_dssp CSSHHHHHHHHHHHHHHTTCTTTHHHHHTSHHHHTTHHHHSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHHTSCS---C
T ss_pred CCchhHHHHHHHHHHHcccCCchHHHHHhcchhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHhhccc---h
Confidence 4578899999999999987744345555433223344443322 2456778888888898732111000 1
Q ss_pred cCChHHHHHHhCC---------CCHHHHHHHHHHHHHHhhcccc
Q 010291 128 RGAVRPLIEMLQS---------PDVQLREMSAFALGRLAQDMHN 162 (513)
Q Consensus 128 ~~~i~~L~~~l~~---------~~~~~~~~a~~~L~~l~~~~~~ 162 (513)
......++..+.. .+++....++-+|+++...++.
T Consensus 178 ~e~~~~l~~~i~~~~~~~e~~~~d~Ea~yR~LvAlGtL~~~~~~ 221 (253)
T 3gae_A 178 LELLPIVADAINTKYGPLEEYQECEEAAYRLTVAYGNLATVEPT 221 (253)
T ss_dssp TTHHHHHHHHHHTTTTTSHHHHHSHHHHHHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHHHhCcHH
Confidence 1223344444441 3788999999999999865443
No 198
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=57.57 E-value=19 Score=29.44 Aligned_cols=69 Identities=19% Similarity=0.150 Sum_probs=54.6
Q ss_pred ChHHHHHHhCCCCHHHHHHHHHHHHHHhhccc--cchhhHhcCChHHHHHHhcC------CCHHHHHHHHHHHHhcc
Q 010291 130 AVRPLIEMLQSPDVQLREMSAFALGRLAQDMH--NQAGIAHNGGLVPLLKLLDS------KNGSLQHNAAFALYGLA 198 (513)
Q Consensus 130 ~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~--~~~~~~~~~~i~~L~~ll~~------~~~~~~~~a~~~L~~l~ 198 (513)
++..|.+.++++++.++..|+..|-.+..+.. -+..+.....+..|++++.. .+..++..++..+..-+
T Consensus 51 A~ral~krl~~~n~~vql~AL~LLd~~vkNCG~~Fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~ 127 (171)
T 1juq_A 51 AVRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWT 127 (171)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHH
Confidence 46678899999999999999999999987653 35566777778889998863 35788888888876654
No 199
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=56.29 E-value=5.5 Score=31.52 Aligned_cols=29 Identities=7% Similarity=0.356 Sum_probs=27.1
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHH
Q 010291 443 ISLENVSSMYELSEAFHAISLRHTCILYI 471 (513)
Q Consensus 443 ~~~~n~~~~~~~a~~~~~~~L~~~~~~~i 471 (513)
++.+|+..++..|+.|+.+.|.+.|.+|+
T Consensus 115 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 115 LNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 67889999999999999999999999875
No 200
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=55.18 E-value=17 Score=31.07 Aligned_cols=69 Identities=3% Similarity=0.059 Sum_probs=50.0
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhccC-chhHHHHHhcCCHHHHHHhhc-CCCHHHHHHHHHHHHHhh
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFKN-DENKNQIVECNALPTLILMLR-SEDSAIHYEAVGVIGNLV 73 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~-~~~~~~i~~~g~i~~Lv~lL~-~~~~~v~~~a~~~L~~l~ 73 (513)
+..|..-|+++++.++..|+..|-.+..+. ......+.....+..|+.++. ..+..|+..++..+..-+
T Consensus 44 ~r~l~krl~~~n~~~~l~aL~Lle~~vkNcG~~f~~eva~~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~ 114 (220)
T 1dvp_A 44 FAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWA 114 (220)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhccCHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 455666778899999999999998888753 345566666667777777776 346778887777665554
No 201
>1vsy_5 Proteasome activator BLM10; 20S proteasome BLM10, hydrolase, nucleus, phosphoprotein, PR proteasome, threonine protease; 3.00A {Saccharomyces cerevisiae} PDB: 3l5q_6
Probab=54.70 E-value=34 Score=36.82 Aligned_cols=218 Identities=12% Similarity=-0.004 Sum_probs=107.5
Q ss_pred hHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCC----CCHHHHHHHHHHHHHHhhcccc-c
Q 010291 89 LQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQS----PDVQLREMSAFALGRLAQDMHN-Q 163 (513)
Q Consensus 89 i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~----~~~~~~~~a~~~L~~l~~~~~~-~ 163 (513)
+..|+++-.+..++++..|-.+|......-+..+.. ++|.+++.|+. .+.+-.+-|+.+|..=...... +
T Consensus 135 l~dL~~Ls~S~Y~~VR~~AQ~~L~~~~~~~~gs~~~-----iip~ll~~L~~~~~~~~~~~iKGaLy~L~~k~~~~~~~~ 209 (997)
T 1vsy_5 135 LVDIIQLATSLYPDIYKPAQGTLVHCMKQLVGSYGV-----VINKIIPSLEKAIKDHDYMKIQVILNVLLIKKIHRKLMT 209 (997)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHTTBTTHHHH-----HHHHHHHHHHHHHHTCSCHHHHHHHHHTTSHHHHHHGGG
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHhcccHHHH-----HHHHHHHHHhccccCCCHHHHHHHHHHHhhhhhhhHHhc
Confidence 456677777888999999999999988665555543 35566666643 3555556666655411110000 0
Q ss_pred hhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhccc---CcchHHHHHhhcCcccccchhhhhh-hhHHHHHHHHHHHHH
Q 010291 164 AGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLAD---NEDNVADFIRVGGVQKLQDGEFIVQ-ATKDCVAKTLKRLEE 239 (513)
Q Consensus 164 ~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~---~~~~~~~~~~~g~i~~L~~~~~~~~-~~~~~~~~~~~~~~~ 239 (513)
..-.-...++.|++....+.+.++.-+-.+...+.. .+.... ......+..+........ ..........++...
T Consensus 210 d~~~~~~~~~ali~~~~~dKpsI~~l~~~l~~~i~~~~~~p~~~~-~~~~~~~~~i~~~d~~i~~~~~~~~~~~~~~r~~ 288 (997)
T 1vsy_5 210 DYKDIGRLIFLLIECCRVNELEIGMYADKILTDIVIGIKIPSSVC-VISDQAFLPLAPPDGTINLQVEAVKLAKKKKREY 288 (997)
T ss_dssp CHHHHHHHHHHHHHTCSCSSSSTTTHHHHHHHHHHTSCCCCCSCC-CCCGGGTGGGCCSCSSTTSHHHHHHHHTTHHHHH
T ss_pred ChHHHHHHHHHHHHhCcCCCHHHHHHHHHHHHHHHhcccCchHHH-HHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 001111234445555555555554433333222221 111100 000111111110000000 000000000111111
Q ss_pred Hhh--hhhHHHHHHHHHH-hh--cchhhhHHHHHhhccCCCCcceeeecCCchHHHHhhhcCCCcchhhhHHHHHHHhhh
Q 010291 240 KIH--GRVLNHLLYLMRV-AE--KGVQRRVALALAHLCSPDDQRTIFIDGGGLELLLGLLGSTNPKQQLDGAVALFKLAN 314 (513)
Q Consensus 240 ~~~--~~~l~~Lv~lL~~-~~--~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~ 314 (513)
..+ .+....|+...++ .+ +.....++..+.++....+ ......++..+++.+.+++|.+|..|..++..+..
T Consensus 289 ~~~~~~~L~~~l~~~~~~~~h~~Wk~~~~~~~~l~~l~~r~d---~~~~~~~v~~~~~~l~~dhp~~R~~a~~~l~~il~ 365 (997)
T 1vsy_5 289 YLSLLVDLQDKLLDKLDNEKDMGWKIRMFILRFVTQIQSNLE---SKPDKRAVFSIISQISTKHPEIIHLVVKSLLSTCN 365 (997)
T ss_dssp HHHHHHHHHHHHHHHHHSSTTCCSCHHHHHHHHHHHHTCCSS---CCCCHHHHHHHHGGGGGCCHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHhcCC---CCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHH
Confidence 111 2344455566522 44 6667777777666654322 23344578889999999999999999988866665
Q ss_pred c
Q 010291 315 K 315 (513)
Q Consensus 315 ~ 315 (513)
.
T Consensus 366 ~ 366 (997)
T 1vsy_5 366 K 366 (997)
T ss_dssp H
T ss_pred H
Confidence 4
No 202
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=53.85 E-value=6.3 Score=31.01 Aligned_cols=33 Identities=6% Similarity=0.087 Sum_probs=26.4
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Q 010291 443 ISLENVSSMYELSEAFHAISLRHTCILYIMEHF 475 (513)
Q Consensus 443 ~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~ 475 (513)
++.+++..++..|+.|..+.|.+.|.+|+.+++
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 123 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALCSNL 123 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC-----
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 567899999999999999999999999998654
No 203
>3pst_A Protein DOA1; protein degradation, CDC48, ubiquitin, nuclear protein; 2.00A {Saccharomyces cerevisiae} PDB: 3psp_A
Probab=52.84 E-value=70 Score=30.32 Aligned_cols=105 Identities=10% Similarity=0.102 Sum_probs=67.1
Q ss_pred cCCHHHHHHHHHHHHHhhccCchhHHHHH-hcCCHHHHHHhhc--------CCCHHHHHHHHHHHHHhhcCChhHHHHHH
Q 010291 14 FTDTKVQRAAAGALRTLAFKNDENKNQIV-ECNALPTLILMLR--------SEDSAIHYEAVGVIGNLVHSSPNIKKEVL 84 (513)
Q Consensus 14 ~~~~~~~~~a~~~L~~l~~~~~~~~~~i~-~~g~i~~Lv~lL~--------~~~~~v~~~a~~~L~~l~~~~~~~~~~~~ 84 (513)
+..+..+..+++++.|+-. ++.....+. .......+++.+. ..+..++..++.++.|++......+.
T Consensus 273 ~~~~an~MltlR~laNlF~-~~~~g~~ll~~~~~~~~i~~~i~~~l~~~~~~~nkNl~IA~ATLllNlAv~~~~~~~--- 348 (425)
T 3pst_A 273 NKNITLTMLTVRILVNCFN-NENWGVKLLESNQVYKSIFETIDTEFSQASAKQSQNLAIAVSTLIFNYSALVTKGNS--- 348 (425)
T ss_dssp CSSHHHHHHHHHHHHHHTT-CTTTHHHHHTSHHHHHHHHHHSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSCS---
T ss_pred CCChhHHHHHHHHHHHhcC-CcchHHHHhhCchhHHHHHHHHHHHhhhcccCCCchHHHHHHHHHHHHHHHHhcccc---
Confidence 4568899999999999987 455333333 3223445555442 23567899999999999853211100
Q ss_pred hCCChHHHHHhhc---------CCChHHHHHHHHHHHHhhcCCchhh
Q 010291 85 AAGALQPVIGLLS---------SCCSESQREAALLLGQFAATDSDCK 122 (513)
Q Consensus 85 ~~g~i~~L~~ll~---------~~~~~~~~~a~~~L~~l~~~~~~~~ 122 (513)
+......++.++. ..+++..+.++.+|++|....+..+
T Consensus 349 ~~el~~~l~e~l~~~~g~~E~~~~d~EA~yRlLVALGtLv~~~~~~~ 395 (425)
T 3pst_A 349 DLELLPIVADAINTKYGPLEEYQECEEAAYRLTVAYGNLATVEPTLR 395 (425)
T ss_dssp CTTHHHHHHHHHHHTTTTSHHHHTSHHHHHHHHHHHHHHHHHCHHHH
T ss_pred hHHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 1223345565555 2588899999999999986544433
No 204
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=52.31 E-value=19 Score=28.92 Aligned_cols=64 Identities=5% Similarity=0.008 Sum_probs=47.7
Q ss_pred cCHHHHHHHHHHHHHhcHH---------------HHHHHHHHHHHhcCChhhHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Q 010291 411 VTLDIAQDLLRAADQYLLE---------------GLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHF 475 (513)
Q Consensus 411 ~~~~~~~~ll~~A~~~~~~---------------~l~~~c~~~l~~~~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~ 475 (513)
++...+..++..+.+..-. .+..--.+|+ .++.+++..++..|...+...|.+.|.+|+...+
T Consensus 49 V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~--~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i 126 (159)
T 2ast_A 49 VNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVANMI 126 (159)
T ss_dssp SCHHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHH--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4567777888887766511 1222233444 3889999999999999999999999999998766
Q ss_pred H
Q 010291 476 D 476 (513)
Q Consensus 476 ~ 476 (513)
.
T Consensus 127 ~ 127 (159)
T 2ast_A 127 K 127 (159)
T ss_dssp S
T ss_pred c
Confidence 4
No 205
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=51.52 E-value=11 Score=28.61 Aligned_cols=31 Identities=16% Similarity=0.203 Sum_probs=27.4
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHHHH
Q 010291 443 ISLENVSSMYELSEAFHAISLRHTCILYIME 473 (513)
Q Consensus 443 ~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~ 473 (513)
++.+|+..++..|+.|..+.|.+.|.+++..
T Consensus 87 i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 87 LQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp ECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 6789999999999999999999999998653
No 206
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=51.00 E-value=1.3e+02 Score=26.37 Aligned_cols=141 Identities=8% Similarity=0.071 Sum_probs=87.2
Q ss_pred HHHHhhcc---CCHHHHHHHHHHHHHhhcc-CchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHH
Q 010291 7 PLVELLEF---TDTKVQRAAAGALRTLAFK-NDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKE 82 (513)
Q Consensus 7 ~Lv~lL~~---~~~~~~~~a~~~L~~l~~~-~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 82 (513)
.++++|+. ...+.+...+.-...++.+ ++..- ..+++.++++-.+++.++|+..+..+...+...++...
T Consensus 16 ~v~~lln~A~~~~~~~kl~~L~qa~el~~~~dp~ll-----~~~l~~il~~~~~~~~~vrk~~~~Fi~e~~~~k~~l~~- 89 (257)
T 3gs3_A 16 KVVDWCNELVIASPSTKCELLAKVQETVLGSCAELA-----EEFLESVLSLAHDSNMEVRKQVVAFVEQVCKVKVELLP- 89 (257)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTGGGH-----HHHHHHHHGGGGCSCHHHHHHHHHHHHHHHHHCGGGHH-
T ss_pred HHHHHHHHhhhcCcHHHHHHHHHHHHHHHccCHhHH-----HHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 44555532 2336777778878876653 23322 23567777776678899999999999999865554332
Q ss_pred HHhCCChHHHHHhhcCCChHHHHHHHHHHHHhh--------cCCch---hhHHHH-hcCChHHHHHHhCCCCHHHHHHHH
Q 010291 83 VLAAGALQPVIGLLSSCCSESQREAALLLGQFA--------ATDSD---CKVHIV-QRGAVRPLIEMLQSPDVQLREMSA 150 (513)
Q Consensus 83 ~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~--------~~~~~---~~~~~~-~~~~i~~L~~~l~~~~~~~~~~a~ 150 (513)
..++.|..++++.++.+.+.+..+..++- ..+.. ...... -..+-..+++.+.+.+..++..|.
T Consensus 90 ----~~l~~L~~Ll~d~d~~V~K~~I~~~~~iY~~~l~~i~~~~~~~~~~~~~W~~m~~lK~~Il~~~~s~n~gvkl~~i 165 (257)
T 3gs3_A 90 ----HVINVVSMLLRDNSAQVIKRVIQACGSIYKNGLQYLCSLMEPGDSAEQAWNILSLIKAQILDMIDNENDGIRTNAI 165 (257)
T ss_dssp ----HHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHGGGSSCHHHHHHHH
T ss_pred ----HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHccCCcchHHHHH
Confidence 35778888999889999988887666653 22110 000000 011223455556666777777777
Q ss_pred HHHHHHh
Q 010291 151 FALGRLA 157 (513)
Q Consensus 151 ~~L~~l~ 157 (513)
..+..+.
T Consensus 166 KF~e~vI 172 (257)
T 3gs3_A 166 KFLEGVV 172 (257)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666654
No 207
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=47.97 E-value=3.1 Score=32.19 Aligned_cols=33 Identities=0% Similarity=0.059 Sum_probs=23.5
Q ss_pred cCChhhHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q 010291 442 DISLENVSSMYELSEAFHAISLRHTCILYIMEH 474 (513)
Q Consensus 442 ~~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 474 (513)
.++.+|+..++..|+.|+.+.|.+.|.+|+.+.
T Consensus 95 ~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 95 SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp ECCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 378899999999999999999999999998764
No 208
>3l3f_X Protein DOA1, DOA1/UFD3; armadillo-like repeat structure, nucleus, UBL conjugation PA protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=47.68 E-value=36 Score=31.57 Aligned_cols=103 Identities=11% Similarity=0.117 Sum_probs=65.2
Q ss_pred cCCHHHHHHHHHHHHHhhccCchhHHHHHhc-CCHHHHHHhhc--------CCCHHHHHHHHHHHHHhhcCChhHHHHHH
Q 010291 14 FTDTKVQRAAAGALRTLAFKNDENKNQIVEC-NALPTLILMLR--------SEDSAIHYEAVGVIGNLVHSSPNIKKEVL 84 (513)
Q Consensus 14 ~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~-g~i~~Lv~lL~--------~~~~~v~~~a~~~L~~l~~~~~~~~~~~~ 84 (513)
+..+..+..+++++.|+-. ++.....+... .....+++.+. ..+..++..++..+.|++......+.
T Consensus 210 ~~~~~n~MltlR~laNlF~-~~~~g~~ll~~~~~~~~i~~~i~~~~~~~~~~~nkNl~IA~ATL~lNlAv~~~~~~~--- 285 (362)
T 3l3f_X 210 NKNITLTMLTVRILVNCFN-NENWGVKLLESNQVYKSIFETIDTEFSQASAKQSQNLAIAVSTLIFNYSALVTKGNS--- 285 (362)
T ss_dssp CSSHHHHHHHHHHHHHHTT-CTTTHHHHHTSHHHHTTHHHHSCSCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTCS---
T ss_pred CCChhHHHHHHHHHHHhcc-CcchHHHHHhcchhHHHHHHHHHHHhhhcccCCCchHHHHHHHHHHHHHHHHhcccc---
Confidence 4568899999999999987 45533333322 12233444331 23567899999999999853211100
Q ss_pred hCCChHHHHHhhc---------CCChHHHHHHHHHHHHhhcCCch
Q 010291 85 AAGALQPVIGLLS---------SCCSESQREAALLLGQFAATDSD 120 (513)
Q Consensus 85 ~~g~i~~L~~ll~---------~~~~~~~~~a~~~L~~l~~~~~~ 120 (513)
+......++.++. ..+++....++.+|++|...++.
T Consensus 286 ~~el~~~l~~~l~~~~g~~E~~~~d~EA~yRlLVALGtL~~~~~~ 330 (362)
T 3l3f_X 286 DLELLPIVADAINTKYGPLEEYQECEEAAYRLTVAYGNLATVEPT 330 (362)
T ss_dssp CTTHHHHHHHHHHHTTTTSHHHHTSHHHHHHHHHHHHHHHHHCHH
T ss_pred hHHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHHHHhcCHH
Confidence 1223345666665 25889999999999999865444
No 209
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=45.75 E-value=31 Score=27.61 Aligned_cols=69 Identities=9% Similarity=0.067 Sum_probs=49.3
Q ss_pred hhHHHHhhc-cCCHHHHHHHHHHHHHhhccC-chhHHHHHhcCCHHH-HHHhhc---CCCHHHHHHHHHHHHHhh
Q 010291 5 IPPLVELLE-FTDTKVQRAAAGALRTLAFKN-DENKNQIVECNALPT-LILMLR---SEDSAIHYEAVGVIGNLV 73 (513)
Q Consensus 5 i~~Lv~lL~-~~~~~~~~~a~~~L~~l~~~~-~~~~~~i~~~g~i~~-Lv~lL~---~~~~~v~~~a~~~L~~l~ 73 (513)
+..|...|+ ++++.++..|+..|-.+..+. +.....+.....+.. |+.++. ..+..|+..++..+..-+
T Consensus 55 ~ral~krl~~~~n~~v~l~AL~LLd~~vkNcG~~fh~eva~~~fl~e~Lvk~~~~k~~~~~~Vk~kil~li~~W~ 129 (157)
T 1elk_A 55 LRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWA 129 (157)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHTHHHHSTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHHhCHHHHHHHhhHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHH
Confidence 455666676 478899999999888888753 556666777777777 777774 234578888887776655
No 210
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=43.98 E-value=14 Score=33.63 Aligned_cols=33 Identities=21% Similarity=0.158 Sum_probs=30.1
Q ss_pred cCHHHHHHHHHHHHHhcHHHHHHHHHHHHHhcC
Q 010291 411 VTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDI 443 (513)
Q Consensus 411 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~ 443 (513)
++.+++..++.+|+.|+++.|++.|.+++.+++
T Consensus 272 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~ 304 (312)
T 3hqi_A 272 LSVENAAEILILADLHSADQLKTQAVDFINYHA 304 (312)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 567799999999999999999999999998864
No 211
>3vld_A DNA mismatch repair protein HSM3; heat repeat, RPT1, chaperone; HET: DNA; 2.05A {Saccharomyces cerevisiae} PDB: 3vle_A* 3vlf_A* 4a3v_A* 4a3t_A*
Probab=42.05 E-value=2e+02 Score=27.78 Aligned_cols=103 Identities=16% Similarity=0.122 Sum_probs=69.5
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHH---HHHHHHHHHHHhhcCChhHHH
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSA---IHYEAVGVIGNLVHSSPNIKK 81 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~---v~~~a~~~L~~l~~~~~~~~~ 81 (513)
++.++..|+++++.+...||.++. .+.-+..+...+++..+++++-+++.. +.-..=.++..++.+ +-.|+
T Consensus 118 ve~i~~aL~S~~~~l~~~~ckVI~-----~s~pk~lfa~t~iidiLL~lyFd~~t~i~~vvn~IE~~~~~Lssd-eLirr 191 (500)
T 3vld_A 118 AEDLVKALRSEIDPLKVAACRVIE-----NSQPKGLFATSNIIDILLDILFDEKVENDKLITAIEKALERLSTD-ELIRR 191 (500)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHH-----TCSSGGGGTTSSHHHHHHHHHTCTTCCCHHHHHHHHHHHHHHTTS-HHHHH
T ss_pred HHHHHHHHhcCChHHHHHHHHHhc-----ccCchhHhccChHHHHHHHHHcCCCCCcHHHHHHHHHHHHHcCch-HHHHH
Confidence 456788888989999999999888 345567788889999999988865433 444445566666543 55666
Q ss_pred HHHhCCChHHHHHhhcCCChHHHHHHHHHHHHh
Q 010291 82 EVLAAGALQPVIGLLSSCCSESQREAALLLGQF 114 (513)
Q Consensus 82 ~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l 114 (513)
.+.+ ...+.+...=++.++-+...-...+.-+
T Consensus 192 ril~-nnl~lL~~vK~~~~~i~~sRLLdll~il 223 (500)
T 3vld_A 192 RLFD-NNLPYLVSVKGRMETVSFVRLIDFLTIE 223 (500)
T ss_dssp HHHT-TTHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHH-HhHHHHHHHhcCCCceeHHHHHHHHHHH
Confidence 6665 4567666666656665554444444444
No 212
>3pst_A Protein DOA1; protein degradation, CDC48, ubiquitin, nuclear protein; 2.00A {Saccharomyces cerevisiae} PDB: 3psp_A
Probab=40.66 E-value=1.3e+02 Score=28.50 Aligned_cols=130 Identities=10% Similarity=0.010 Sum_probs=77.1
Q ss_pred HHHHHHHHHHhhcCChhHHHHHHhCCChHHHH-HhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCC
Q 010291 62 HYEAVGVIGNLVHSSPNIKKEVLAAGALQPVI-GLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQS 140 (513)
Q Consensus 62 ~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~-~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~ 140 (513)
+-.++.+|+-++.+.+.. +.+..++ ..+....+..+-.++++++|+.....-.+..+........+++.+..
T Consensus 243 ~FPaLDLLRl~v~~p~~~-------~~l~~li~~~l~~~~~an~MltlR~laNlF~~~~~g~~ll~~~~~~~~i~~~i~~ 315 (425)
T 3pst_A 243 KTPAYDIVRLIVKKLPYS-------SDIKDYIEEGLGNKNITLTMLTVRILVNCFNNENWGVKLLESNQVYKSIFETIDT 315 (425)
T ss_dssp CHHHHHHHHHHGGGCSCG-------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTTCTTTHHHHHTSHHHHHHHHHHSCC
T ss_pred ccHHHHHHHHHHcCCchH-------HHHHHHHHHhcCCCChhHHHHHHHHHHHhcCCcchHHHHhhCchhHHHHHHHHHH
Confidence 555777777776654322 1222232 23334567788889999999975544234444333334556665532
Q ss_pred --------CCHHHHHHHHHHHHHHhhcccc-chhhHhcCChHHHHHHhc---------CCCHHHHHHHHHHHHhcccCc
Q 010291 141 --------PDVQLREMSAFALGRLAQDMHN-QAGIAHNGGLVPLLKLLD---------SKNGSLQHNAAFALYGLADNE 201 (513)
Q Consensus 141 --------~~~~~~~~a~~~L~~l~~~~~~-~~~~~~~~~i~~L~~ll~---------~~~~~~~~~a~~~L~~l~~~~ 201 (513)
.+..++..++..+.|++..... +.. ......+.+.+. ..+.+....++-+|++|....
T Consensus 316 ~l~~~~~~~nkNl~IA~ATLllNlAv~~~~~~~~---~el~~~l~e~l~~~~g~~E~~~~d~EA~yRlLVALGtLv~~~ 391 (425)
T 3pst_A 316 EFSQASAKQSQNLAIAVSTLIFNYSALVTKGNSD---LELLPIVADAINTKYGPLEEYQECEEAAYRLTVAYGNLATVE 391 (425)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSCSC---TTHHHHHHHHHHHTTTTSHHHHTSHHHHHHHHHHHHHHHHHC
T ss_pred HhhhcccCCCchHHHHHHHHHHHHHHHHhcccch---HHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHHHHhcC
Confidence 2456888888999999853221 111 122334555554 247788888999999998633
No 213
>4atg_A TAF6; transcription, TFIID; HET: NHE; 1.89A {Antonospora locustae}
Probab=39.42 E-value=1.3e+02 Score=25.07 Aligned_cols=111 Identities=15% Similarity=0.057 Sum_probs=63.5
Q ss_pred ChHHHHHhhcC------CChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCC---CCHHHHHHHHHHHHHHhh
Q 010291 88 ALQPVIGLLSS------CCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQS---PDVQLREMSAFALGRLAQ 158 (513)
Q Consensus 88 ~i~~L~~ll~~------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~---~~~~~~~~a~~~L~~l~~ 158 (513)
.+|.+++++.+ .+.............|... +...-...-...+|.++.++-. ....+|+.|+..|..++.
T Consensus 41 LlPyf~~fI~~~v~~nl~~l~~L~~lm~~~~ALl~N-~~l~lepYlH~LipsvLtCll~k~l~~~~LRd~AA~lL~~I~~ 119 (196)
T 4atg_A 41 LVPYFIQHISELILKSFKEAEVLKTCIALYFSLIKN-KHVFIDPYLHQILPSLLTCVIGKSIVDDDVRKMSADIVKYIYD 119 (196)
T ss_dssp THHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHC-TTCCCGGGHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcC-CCCChHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 56666666542 3555556666666666533 2221111122356777776633 233899999999999997
Q ss_pred ccccchhhHhcCChHHHHHHhcCCC--HHHHHHHHHHHHhccc
Q 010291 159 DMHNQAGIAHNGGLVPLLKLLDSKN--GSLQHNAAFALYGLAD 199 (513)
Q Consensus 159 ~~~~~~~~~~~~~i~~L~~ll~~~~--~~~~~~a~~~L~~l~~ 199 (513)
.....-.-........+.+.+.+++ .....-|+..|..+..
T Consensus 120 ~~~~~y~~L~~RI~~tl~k~l~dp~~~l~t~YGAi~GL~~lG~ 162 (196)
T 4atg_A 120 TYSRSYKTLAPRVLKTLKGVWMDPNRSEDSQYGALYCLSILSK 162 (196)
T ss_dssp HHTTTSTTHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCH
T ss_pred HhCccCchHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHhHH
Confidence 5544333334445556676665543 4455556666665543
No 214
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=38.46 E-value=24 Score=30.94 Aligned_cols=32 Identities=6% Similarity=0.281 Sum_probs=29.1
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q 010291 443 ISLENVSSMYELSEAFHAISLRHTCILYIMEH 474 (513)
Q Consensus 443 ~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 474 (513)
++.+|+..++..|..|+.+.|.+.|.+|+.++
T Consensus 99 i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~ 130 (256)
T 3hve_A 99 LNEDTIQDVVQAADLLLLTDLKTLCCEFLEGC 130 (256)
T ss_dssp CC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred ccHhHHHHHHHHHHHHChHHHHHHHHHHHHhh
Confidence 67899999999999999999999999999864
No 215
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=37.24 E-value=91 Score=24.81 Aligned_cols=70 Identities=11% Similarity=0.072 Sum_probs=49.0
Q ss_pred CHHHHHHhhc-CCCHHHHHHHHHHHHHhhcCC-hhHHHHHHhCCChHH-HHHhhcC---CChHHHHHHHHHHHHhh
Q 010291 46 ALPTLILMLR-SEDSAIHYEAVGVIGNLVHSS-PNIKKEVLAAGALQP-VIGLLSS---CCSESQREAALLLGQFA 115 (513)
Q Consensus 46 ~i~~Lv~lL~-~~~~~v~~~a~~~L~~l~~~~-~~~~~~~~~~g~i~~-L~~ll~~---~~~~~~~~a~~~L~~l~ 115 (513)
++..|..-|+ +.++.++..|+.+|-.+..+. +.....+.....+.. |+.++.. ....|+..++..+..-+
T Consensus 54 a~ral~krl~~~~n~~v~l~AL~LLd~~vkNcG~~fh~eva~~~fl~e~Lvk~~~~k~~~~~~Vk~kil~li~~W~ 129 (157)
T 1elk_A 54 ALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWA 129 (157)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHTHHHHSTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhCHHHHHHHhhHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHH
Confidence 3566777777 478999999999999888775 444555555566776 6777742 23578888777776654
No 216
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=34.83 E-value=27 Score=31.07 Aligned_cols=32 Identities=25% Similarity=0.470 Sum_probs=29.7
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q 010291 443 ISLENVSSMYELSEAFHAISLRHTCILYIMEH 474 (513)
Q Consensus 443 ~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 474 (513)
++.+|+..++..|..|+.+.|.+.|.+|+.++
T Consensus 107 i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~ 138 (279)
T 3i3n_A 107 VSTGSVHEVLELADRFLLIRLKEFCGEFLKKK 138 (279)
T ss_dssp EETTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHc
Confidence 57789999999999999999999999999874
No 217
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=33.31 E-value=49 Score=28.34 Aligned_cols=72 Identities=10% Similarity=0.143 Sum_probs=52.0
Q ss_pred ChHHHHHhhcCCChHHHHHHHHHHHHhhcCCc-hhhHHHHhcCChHHHHHHhCC-CCHHHHHHHHHHHHHHhhc
Q 010291 88 ALQPVIGLLSSCCSESQREAALLLGQFAATDS-DCKVHIVQRGAVRPLIEMLQS-PDVQLREMSAFALGRLAQD 159 (513)
Q Consensus 88 ~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~-~~~~~~~~~~~i~~L~~~l~~-~~~~~~~~a~~~L~~l~~~ 159 (513)
++..|..-|.+.++.++..|+..|..+..... .....+....+++.|..+++. .++.|++.++..+...+..
T Consensus 46 a~ral~krl~~~n~~v~l~aL~LLe~~vkNcG~~f~~eias~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~~ 119 (226)
T 3zyq_A 46 AVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHA 119 (226)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCHHHHHHHSSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcchHHHHhhccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 45667777888899999999888888874433 334455566677777777754 4778888888888887643
No 218
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=32.67 E-value=63 Score=27.50 Aligned_cols=69 Identities=12% Similarity=0.139 Sum_probs=50.7
Q ss_pred ChHHHHHHhCCCCHHHHHHHHHHHHHHhhcccc--chhhHhcCChHHHHHHhcC-CCHHHHHHHHHHHHhcc
Q 010291 130 AVRPLIEMLQSPDVQLREMSAFALGRLAQDMHN--QAGIAHNGGLVPLLKLLDS-KNGSLQHNAAFALYGLA 198 (513)
Q Consensus 130 ~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~--~~~~~~~~~i~~L~~ll~~-~~~~~~~~a~~~L~~l~ 198 (513)
++..|.+.|+++++.++..|+..|..+..+... +..+.....++.|..++.. .+..++..++..+..-+
T Consensus 43 a~r~l~krl~~~n~~~~l~aL~Lle~~vkNcG~~f~~eva~~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~ 114 (220)
T 1dvp_A 43 AFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWA 114 (220)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 466788899999999999999999999876533 4455555667777777753 45778777777665544
No 219
>1vsy_5 Proteasome activator BLM10; 20S proteasome BLM10, hydrolase, nucleus, phosphoprotein, PR proteasome, threonine protease; 3.00A {Saccharomyces cerevisiae} PDB: 3l5q_6
Probab=32.22 E-value=1.1e+02 Score=33.03 Aligned_cols=101 Identities=16% Similarity=0.029 Sum_probs=59.9
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcC----CChHHHHHHHHHHHH-----hhcC
Q 010291 47 LPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSS----CCSESQREAALLLGQ-----FAAT 117 (513)
Q Consensus 47 i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~----~~~~~~~~a~~~L~~-----l~~~ 117 (513)
+.-|+++--+.-++||..|-.+|......-+..+..+ ++.+++.|+. .+.+-.+.|+.+|.. .+..
T Consensus 135 l~dL~~Ls~S~Y~~VR~~AQ~~L~~~~~~~~gs~~~i-----ip~ll~~L~~~~~~~~~~~iKGaLy~L~~k~~~~~~~~ 209 (997)
T 1vsy_5 135 LVDIIQLATSLYPDIYKPAQGTLVHCMKQLVGSYGVV-----INKIIPSLEKAIKDHDYMKIQVILNVLLIKKIHRKLMT 209 (997)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHTTBTTHHHHH-----HHHHHHHHHHHHHTCSCHHHHHHHHHTTSHHHHHHGGG
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHhcccHHHHH-----HHHHHHHHhccccCCCHHHHHHHHHHHhhhhhhhHHhc
Confidence 3444444446678999999999999887666665554 5666666643 455555666665541 1111
Q ss_pred CchhhHHHHhcCChHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 010291 118 DSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLA 157 (513)
Q Consensus 118 ~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~ 157 (513)
+... -..+++.|+.....+.+.++..+-.+...+.
T Consensus 210 d~~~-----~~~~~~ali~~~~~dKpsI~~l~~~l~~~i~ 244 (997)
T 1vsy_5 210 DYKD-----IGRLIFLLIECCRVNELEIGMYADKILTDIV 244 (997)
T ss_dssp CHHH-----HHHHHHHHHHTCSCSSSSTTTHHHHHHHHHH
T ss_pred ChHH-----HHHHHHHHHHhCcCCCHHHHHHHHHHHHHHH
Confidence 1111 1234666777766667777666655555554
No 220
>2b6c_A Hypothetical protein EF3068; structural genomis, DNA repair enzyme, structural genomics, protein structure initiative; HET: SO4; 2.10A {Enterococcus faecalis} SCOP: a.118.1.17
Probab=31.74 E-value=2.1e+02 Score=24.04 Aligned_cols=106 Identities=11% Similarity=-0.043 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHH
Q 010291 15 TDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIG 94 (513)
Q Consensus 15 ~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ 94 (513)
++.++.-..+.+++.+....++ ...+.+.....+++.-+|+.|+..+...........- ++.+-.
T Consensus 102 ~nWd~~D~~a~~~~~~~~~~~~--------~~~~~i~~W~~s~~~w~rR~ai~~~l~~~~~~~~~~~-------~~i~~~ 166 (220)
T 2b6c_A 102 AWWDSVDAWRKFFGSWVALHLT--------ELPTIFALFYGAENFWNRRVALNLQLMLKEKTNQDLL-------KKAIIY 166 (220)
T ss_dssp CSHHHHHHHHHHHHHHHHHSGG--------GHHHHHHHHTTCSSHHHHHHHHHTTTTCGGGCCHHHH-------HHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHChH--------HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHCCCHHHH-------HHHHHH
Q ss_pred hhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHH
Q 010291 95 LLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLI 135 (513)
Q Consensus 95 ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~ 135 (513)
++.+++.-++...+|+|..++..+++.....+..+.++.+.
T Consensus 167 ~~~d~~~yV~kavgW~Lr~~~k~~~~~v~~fl~~~~l~~~~ 207 (220)
T 2b6c_A 167 DRTTEEFFIQKAIGWSLRQYSKTNPQWVEELMKELVLSPLA 207 (220)
T ss_dssp TTTCCCHHHHHHHHHHHHHHTTTCHHHHHHHHHHSCCCHHH
T ss_pred hCCChHHHHHHHHHHHHHHHHhhCHHHHHHHHhhccCCHHH
No 221
>3vld_A DNA mismatch repair protein HSM3; heat repeat, RPT1, chaperone; HET: DNA; 2.05A {Saccharomyces cerevisiae} PDB: 3vle_A* 3vlf_A* 4a3v_A* 4a3t_A*
Probab=31.47 E-value=3.6e+02 Score=25.99 Aligned_cols=111 Identities=17% Similarity=0.079 Sum_probs=76.4
Q ss_pred HHHHhCCChHHHHHhhcCCChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCCCH--H-HHHHHHHHHHHHh
Q 010291 81 KEVLAAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDV--Q-LREMSAFALGRLA 157 (513)
Q Consensus 81 ~~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~--~-~~~~a~~~L~~l~ 157 (513)
+.+.+.=-+..++..|.++.+.+...||.++. .+..+..+...+++..+++++-+++. . +....-.++..|+
T Consensus 110 d~VLevysve~i~~aL~S~~~~l~~~~ckVI~-----~s~pk~lfa~t~iidiLL~lyFd~~t~i~~vvn~IE~~~~~Ls 184 (500)
T 3vld_A 110 DDVLEVYSAEDLVKALRSEIDPLKVAACRVIE-----NSQPKGLFATSNIIDILLDILFDEKVENDKLITAIEKALERLS 184 (500)
T ss_dssp HHHHHHSCHHHHHHHHTSSCHHHHHHHHHHHH-----TCSSGGGGTTSSHHHHHHHHHTCTTCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCHHHHHHHHhcCChHHHHHHHHHhc-----ccCchhHhccChHHHHHHHHHcCCCCCcHHHHHHHHHHHHHcC
Confidence 56667778899999999998999999998888 23446677788999999999876532 3 7777777777877
Q ss_pred hccccchhhHhcCChHHHHHHhcCCCHHHHHHHHHHHHhc
Q 010291 158 QDMHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGL 197 (513)
Q Consensus 158 ~~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l 197 (513)
.+.=.|+.+.+ ...+.+..+=...++.....-+..+.-+
T Consensus 185 sdeLirrril~-nnl~lL~~vK~~~~~i~~sRLLdll~il 223 (500)
T 3vld_A 185 TDELIRRRLFD-NNLPYLVSVKGRMETVSFVRLIDFLTIE 223 (500)
T ss_dssp TSHHHHHHHHT-TTHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHH-HhHHHHHHHhcCCCceeHHHHHHHHHHH
Confidence 65545666664 4555555554445554444444444433
No 222
>2cmy_B Beta trypsin, veronica hederifolia trypsin inhibitor; acyl-enzyme intermediate, serine protease inhibitor, zymogen protease, digestion; 2.25A {Veronica hederifolia} SCOP: g.2.4.1
Probab=30.57 E-value=16 Score=19.27 Aligned_cols=24 Identities=8% Similarity=0.102 Sum_probs=17.4
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHH
Q 010291 449 SSMYELSEAFHAISLRHTCILYIM 472 (513)
Q Consensus 449 ~~~~~~a~~~~~~~L~~~~~~~i~ 472 (513)
+.++-+|.++..++|...|+.-..
T Consensus 7 ckvmcyaqrhsspellrrcldnce 30 (34)
T 2cmy_B 7 CKVMCYAQRHSSPELLRRCLDNCE 30 (34)
T ss_dssp CHHHHHHBC--CCHHHHHHHHHC-
T ss_pred hhHHHHHhhcCCHHHHHHHHHhhh
Confidence 466789999999999999987554
No 223
>3l3f_X Protein DOA1, DOA1/UFD3; armadillo-like repeat structure, nucleus, UBL conjugation PA protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=28.60 E-value=2.1e+02 Score=26.39 Aligned_cols=102 Identities=9% Similarity=0.041 Sum_probs=61.8
Q ss_pred CCCHHHHHHHHHHHHHhhcCChhHHHHHHhCCChHHHHHhhcC--------CChHHHHHHHHHHHHhhcCCchhhHHHHh
Q 010291 56 SEDSAIHYEAVGVIGNLVHSSPNIKKEVLAAGALQPVIGLLSS--------CCSESQREAALLLGQFAATDSDCKVHIVQ 127 (513)
Q Consensus 56 ~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~--------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~ 127 (513)
+.++..+..+++++.|+..+....+..+........++..+.+ .+..++..++..+.|++......+. +
T Consensus 210 ~~~~~n~MltlR~laNlF~~~~~g~~ll~~~~~~~~i~~~i~~~~~~~~~~~nkNl~IA~ATL~lNlAv~~~~~~~---~ 286 (362)
T 3l3f_X 210 NKNITLTMLTVRILVNCFNNENWGVKLLESNQVYKSIFETIDTEFSQASAKQSQNLAIAVSTLIFNYSALVTKGNS---D 286 (362)
T ss_dssp CSSHHHHHHHHHHHHHHTTCTTTHHHHHTSHHHHTTHHHHSCSCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTCS---C
T ss_pred CCChhHHHHHHHHHHHhccCcchHHHHHhcchhHHHHHHHHHHHhhhcccCCCchHHHHHHHHHHHHHHHHhcccc---h
Confidence 5578899999999999987644234443221112334443321 2356788888888888742111000 1
Q ss_pred cCChHHHHHHhC---------CCCHHHHHHHHHHHHHHhhcc
Q 010291 128 RGAVRPLIEMLQ---------SPDVQLREMSAFALGRLAQDM 160 (513)
Q Consensus 128 ~~~i~~L~~~l~---------~~~~~~~~~a~~~L~~l~~~~ 160 (513)
......+..++. ..+++....++-+|++|...+
T Consensus 287 ~el~~~l~~~l~~~~g~~E~~~~d~EA~yRlLVALGtL~~~~ 328 (362)
T 3l3f_X 287 LELLPIVADAINTKYGPLEEYQECEEAAYRLTVAYGNLATVE 328 (362)
T ss_dssp TTHHHHHHHHHHHTTTTSHHHHTSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHHHHhcC
Confidence 123345555555 258899999999999998533
No 224
>4b8b_A General negative regulator of transcription subun; 2.80A {Saccharomyces cerevisiae S288C}
Probab=27.51 E-value=24 Score=34.78 Aligned_cols=140 Identities=12% Similarity=0.072 Sum_probs=76.2
Q ss_pred HHHHhhcCHHHHHhccCCCCCCCCCceec----CC----CCHHHHHHHHHHHhcCccccCHHHHHHHHHHHHHhcHHHHH
Q 010291 361 RICLLASSDAFRAMFDGGYREKDARDIEI----PN----IRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLK 432 (513)
Q Consensus 361 ~~il~~~s~~f~~~~~~~~~e~~~~~i~l----~~----~~~~~~~~~l~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~l~ 432 (513)
..|=.....||++|+++...- ...|.+ .+ -+.+.|.++++.++...-.++.--..++-..|..||-
T Consensus 445 ~dIE~ean~yfqkmY~~eisI--~~iV~~L~~~K~S~~~rdqdvFaCMIh~LFdEyrff~~YP~~eL~iTA~LFG~---- 518 (603)
T 4b8b_A 445 NDIEKEMQNYLQKMYSGELAI--KDVIELLRRLRDSDLPRDQEVFTCITHAVIAESTFFQDYPLDALATTSVLFGS---- 518 (603)
T ss_dssp HHHHHHHHHHHHHHHTTSSCH--HHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHGGGGGGSCHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHHcCCCCH--HHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH----
Confidence 456666789999999875311 111111 11 1457899999988865554444444566667777761
Q ss_pred HHHHHHHHhcCChhhHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHhhCchhhH-hhhh-----hhHHHHHHHHHHHhCC
Q 010291 433 RLCEYTIAQDISLENVSSMYELSEAFH-AISLRHTCILYIMEHFDKLSTRPGHS-NLIQ-----RIIPEIHNYFAKALTK 505 (513)
Q Consensus 433 ~~c~~~l~~~~~~~n~~~~~~~a~~~~-~~~L~~~~~~~i~~~~~~~~~~~~f~-~l~~-----~~~~~l~~~l~~~~~~ 505 (513)
.....|.......-++++..-|-+.. -..+..+...-+.....++.+-|.|. ++-. +..+++.+.+.+....
T Consensus 519 -LI~~~Ll~~~~L~iALr~ILeAlrkp~~skmf~FGi~ALeqF~~RL~ewPqyc~~lL~~ip~lq~~P~l~q~i~~~a~~ 597 (603)
T 4b8b_A 519 -MILFQLLRGFVLDVAFRIIMRFAKEPPESKMFKFAVQAIYAFRIRLAEYPQYCKDLLRDVPALKSQAQVYQSIVEAATL 597 (603)
T ss_dssp -HHHTTSSCHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHTGGGGGGCHHHHHHHHHHCGGGGGCHHHHHHHHHTTC-
T ss_pred -HHHHcccCcchHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCcccChHHHHHHHHHHcC
Confidence 11111111122233344444444332 34566666666666666777777777 4422 2346788888777655
Q ss_pred CC
Q 010291 506 PN 507 (513)
Q Consensus 506 ~~ 507 (513)
.+
T Consensus 598 ~~ 599 (603)
T 4b8b_A 598 AN 599 (603)
T ss_dssp --
T ss_pred CC
Confidence 33
No 225
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=26.81 E-value=1e+02 Score=24.01 Aligned_cols=67 Identities=15% Similarity=0.121 Sum_probs=43.3
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhcc-CchhHHHHHhcCCHHHHHHhhc----CCC--------HHHHHHHHHHHHH
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFK-NDENKNQIVECNALPTLILMLR----SED--------SAIHYEAVGVIGN 71 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~-~~~~~~~i~~~g~i~~Lv~lL~----~~~--------~~v~~~a~~~L~~ 71 (513)
++.|.+-|++.++.++..|+.+|..++.+ ++..+..+...- .+++.+. .++ ..||..|-.++..
T Consensus 51 m~~L~kRL~~k~~~vk~KaL~lL~yL~~~Gs~~f~~~~r~~~---~~Ik~l~~F~g~~dp~~G~d~g~~VR~~AkEl~~l 127 (140)
T 1vdy_A 51 SEFILKRLDNKSPIVKQKALRLIKYAVGKSGSEFRREMQRNS---VAVRNLFHYKGHPDPLKGDALNKAVRETAHETISA 127 (140)
T ss_dssp HHHHHHHHTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHTT---HHHHTTTTCCCCCCTTTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcceeehHHHHHHHHHHhCCHHHHHHHHHhH---HHHHHHHhcCCCCCcccccchhHHHHHHHHHHHHH
Confidence 45566677788899999999999999864 455555555542 2344333 112 4677777776666
Q ss_pred hhc
Q 010291 72 LVH 74 (513)
Q Consensus 72 l~~ 74 (513)
|..
T Consensus 128 l~d 130 (140)
T 1vdy_A 128 IFS 130 (140)
T ss_dssp HTC
T ss_pred HhC
Confidence 643
No 226
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=26.78 E-value=3.7 Score=31.51 Aligned_cols=30 Identities=20% Similarity=0.430 Sum_probs=26.6
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHHH
Q 010291 443 ISLENVSSMYELSEAFHAISLRHTCILYIM 472 (513)
Q Consensus 443 ~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~ 472 (513)
++.+|+..++..|+.|+.+.|.+.|.+|+.
T Consensus 94 i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 94 LSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp EETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred cCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 578899999999999999999999988763
No 227
>2xpp_A IWS1, ECU08_0440; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.74A {Encephalitozoon cuniculi} PDB: 2xpo_A 2xpn_A 2xpl_A
Probab=25.12 E-value=2.5e+02 Score=21.98 Aligned_cols=77 Identities=16% Similarity=0.211 Sum_probs=56.7
Q ss_pred hhHHHHHHhCCChHHHHHhhcC------CChHHHHHHHHHHHHhhcCCchhhHHHHhcCChHHHHHHhCCC--CHHHHHH
Q 010291 77 PNIKKEVLAAGALQPVIGLLSS------CCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSP--DVQLREM 148 (513)
Q Consensus 77 ~~~~~~~~~~g~i~~L~~ll~~------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~--~~~~~~~ 148 (513)
...+..+++.|++..+-..|+- ++..++.....+|.++- -.+..+.++|+=..++-+-+++ .++.+..
T Consensus 51 ~~l~~~~ld~giL~~l~~WL~PLpDgsLP~~~Ir~~lL~~L~~lP----I~~e~Lk~SglGkvv~~l~k~~~et~~nk~l 126 (145)
T 2xpp_A 51 KALQESLLDEGILDEIKGWLEPLPDKSMPNIKIRKRLLDVLKTMK----IHKEHLVTSGVGKIVYFYSINPKESKEVRAS 126 (145)
T ss_dssp TTTHHHHHHTTHHHHHHHHHSCCTTSCCCCHHHHHHHHHHHHTSC----CCHHHHHHHCHHHHHHHHHHCTTSCHHHHHH
T ss_pred HHHHHHHHHcCHHHHHHHHhCcCCCCCCCCHHHHHHHHHHHHHCC----CCHHHhhcCCCCcchhhhhcCCccCHHHHHH
Confidence 4557888899999999888863 45689999999999984 3356677777766666555554 6678877
Q ss_pred HHHHHHHHh
Q 010291 149 SAFALGRLA 157 (513)
Q Consensus 149 a~~~L~~l~ 157 (513)
|-..+..-+
T Consensus 127 a~~Li~~Ws 135 (145)
T 2xpp_A 127 AKALVQKWT 135 (145)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776654
No 228
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=24.88 E-value=42 Score=26.89 Aligned_cols=63 Identities=11% Similarity=0.071 Sum_probs=32.1
Q ss_pred cCHHHHHHHHHHHHHhcHHH----------------HHHHHHHHHHhcCChhhHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q 010291 411 VTLDIAQDLLRAADQYLLEG----------------LKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEH 474 (513)
Q Consensus 411 ~~~~~~~~ll~~A~~~~~~~----------------l~~~c~~~l~~~~~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 474 (513)
++...+..++..+.+..-.. +..-=.+|+ .++.+++..++..|...+...|.+.|.++++..
T Consensus 47 V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl--~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ 124 (160)
T 2p1m_A 47 VTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFM--KIDQATLFELILAANYLNIKNLLDLTCQTVADM 124 (160)
T ss_dssp SCHHHHHHHHHC--------------------------------------------CHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHcccCCCcccccccccccccchhhHHHHHHH--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45677777888777665321 111112233 278889999999999999999999999999865
Q ss_pred H
Q 010291 475 F 475 (513)
Q Consensus 475 ~ 475 (513)
+
T Consensus 125 i 125 (160)
T 2p1m_A 125 I 125 (160)
T ss_dssp T
T ss_pred H
Confidence 5
No 229
>2jak_A Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; B56G, PP2A, PPP2R5C, phosphorylation; 2.60A {Homo sapiens} SCOP: a.118.1.20
Probab=20.97 E-value=4.7e+02 Score=24.44 Aligned_cols=70 Identities=14% Similarity=0.132 Sum_probs=42.5
Q ss_pred hhHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcC-CCHHHHHHHHHHHHHhhcC
Q 010291 5 IPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRS-EDSAIHYEAVGVIGNLVHS 75 (513)
Q Consensus 5 i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~-~~~~v~~~a~~~L~~l~~~ 75 (513)
+..|++++.++|+..|...-..|..+-..-...|..+++. +-..+.+.+.. ....-....+.+++.+..+
T Consensus 176 i~~Ll~lfdSeDpRERd~LktiLhrIY~Kf~~~R~~Irk~-i~nif~~fiye~e~~~GIaeLLeilgsIIng 246 (392)
T 2jak_A 176 VLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQ-INNIFYRFIYETEHHNGIAELLEILGSIING 246 (392)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHH-HHHHHHHHHTSSCCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccCCCCCHHHHHHHHHHHHhc
Confidence 4568888899999999888888887765445555554432 23344555542 2223334455566666544
No 230
>3jxy_A Alkylpurine DNA glycosylase ALKD; heat repeat, DNA binding, DNA glycosylase, DNA alkylation, L complex, hydrolase-DNA complex; HET: DNA; 1.50A {Bacillus cereus} SCOP: a.118.1.0 PDB: 3jx7_A* 3bvs_A 3jy1_A* 3jxz_A*
Probab=20.32 E-value=3.4e+02 Score=23.03 Aligned_cols=74 Identities=12% Similarity=0.028 Sum_probs=47.0
Q ss_pred hHHHHhhccCCHHHHHHHHHHHHHhhccCchhHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHhhcCChhHHHHHHh
Q 010291 6 PPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKKEVLA 85 (513)
Q Consensus 6 ~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~ 85 (513)
+.+.+...++++.++.-|+..+..... ..... ...+.+..++.+++.-|+....++|..++..+++....+++
T Consensus 134 ~~l~~W~~s~~~w~rR~ai~~~l~~~~--~~d~~-----~~~~~i~~~~~d~~~yV~kAvgW~Lr~~~k~~p~~v~~fl~ 206 (232)
T 3jxy_A 134 AYIPKWIASDNIWLQRAAILFQLKYKQ--KMDEE-----LLFWIIGQLHSSKEFFIQKAIGWVLREYAKTNPDVVWEYVQ 206 (232)
T ss_dssp GTHHHHHHSSCHHHHHHHHHTTTTCGG--GCCHH-----HHHHHHHHHTTCCCHHHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHh--CCCHH-----HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 445566677787777777655422211 11111 12334455667888999999999999999988876555554
Q ss_pred C
Q 010291 86 A 86 (513)
Q Consensus 86 ~ 86 (513)
.
T Consensus 207 ~ 207 (232)
T 3jxy_A 207 N 207 (232)
T ss_dssp H
T ss_pred H
Confidence 3
Done!