Query 010293
Match_columns 513
No_of_seqs 580 out of 4305
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 03:39:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010293.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010293hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 7.6E-34 2.6E-38 294.6 21.2 216 170-396 82-305 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 2.5E-33 8.4E-38 290.8 24.0 312 169-496 15-386 (437)
3 1wdy_A 2-5A-dependent ribonucl 100.0 4.3E-32 1.5E-36 263.6 23.4 252 169-454 6-280 (285)
4 4g8k_A 2-5A-dependent ribonucl 100.0 8.6E-32 2.9E-36 269.5 23.0 213 169-390 26-260 (337)
5 2xai_A ASB-9, ankyrin repeat a 100.0 3.4E-32 1.2E-36 262.5 17.9 232 203-472 3-245 (261)
6 3d9h_A CDNA FLJ77766, highly s 100.0 1.2E-31 4.2E-36 262.2 18.8 158 228-395 55-216 (285)
7 3d9h_A CDNA FLJ77766, highly s 100.0 1.4E-31 4.9E-36 261.7 18.8 247 169-454 16-281 (285)
8 3utm_A Tankyrase-1; tankyrase, 100.0 4.2E-31 1.4E-35 264.8 20.0 220 169-399 25-310 (351)
9 4gpm_A Engineered protein OR26 100.0 3.2E-31 1.1E-35 238.2 16.6 153 235-396 7-163 (169)
10 1wdy_A 2-5A-dependent ribonucl 100.0 2.2E-30 7.4E-35 251.6 23.6 222 170-399 41-283 (285)
11 1yyh_A HN1;, notch 1, ankyrin 100.0 2.5E-31 8.4E-36 255.2 16.7 215 169-393 11-247 (253)
12 1oy3_D Transcription factor in 100.0 1.8E-31 6.3E-36 259.3 15.9 114 329-472 151-265 (282)
13 1oy3_D Transcription factor in 100.0 6.2E-31 2.1E-35 255.6 19.4 190 201-399 7-255 (282)
14 4b93_B Ankyrin repeat domain-c 100.0 4.1E-31 1.4E-35 256.2 17.4 164 228-399 48-215 (269)
15 1yyh_A HN1;, notch 1, ankyrin 100.0 3.6E-31 1.2E-35 254.1 16.6 190 201-399 8-220 (253)
16 4b93_B Ankyrin repeat domain-c 100.0 6E-32 2.1E-36 262.0 10.8 204 169-381 12-230 (269)
17 3aji_A 26S proteasome non-ATPa 100.0 6E-31 2.1E-35 248.3 17.3 213 171-394 9-230 (231)
18 3b7b_A Euchromatic histone-lys 100.0 1.4E-30 4.7E-35 246.9 18.6 210 225-472 4-217 (237)
19 1k1a_A B-cell lymphoma 3-encod 100.0 2.3E-30 7.9E-35 245.7 19.5 217 201-451 7-240 (241)
20 3ljn_A Hypothetical protein; a 100.0 1.7E-30 5.9E-35 262.8 18.7 226 166-395 18-270 (364)
21 3ljn_A Hypothetical protein; a 100.0 5.7E-31 1.9E-35 266.4 15.0 236 201-472 18-296 (364)
22 2xai_A ASB-9, ankyrin repeat a 100.0 1.6E-30 5.6E-35 250.7 17.1 212 170-396 5-224 (261)
23 1k1a_A B-cell lymphoma 3-encod 100.0 7.9E-31 2.7E-35 248.9 14.4 213 170-393 11-240 (241)
24 2fo1_E LIN-12 protein; beta-ba 100.0 7.5E-31 2.6E-35 266.6 15.0 215 170-394 127-371 (373)
25 3aji_A 26S proteasome non-ATPa 100.0 5.1E-30 1.7E-34 242.0 19.6 215 204-452 7-230 (231)
26 3b7b_A Euchromatic histone-lys 100.0 4.6E-30 1.6E-34 243.3 18.3 209 170-389 13-230 (237)
27 3kea_A K1L; tropism, ANK repea 100.0 1.4E-30 4.8E-35 254.7 14.4 230 177-454 9-248 (285)
28 2f8y_A Notch homolog 1, transl 100.0 2.1E-30 7.1E-35 243.3 14.5 203 183-395 6-217 (223)
29 3utm_A Tankyrase-1; tankyrase, 100.0 4.6E-30 1.6E-34 257.2 17.9 230 204-472 25-320 (351)
30 2fo1_E LIN-12 protein; beta-ba 100.0 1E-30 3.5E-35 265.6 12.6 245 170-452 96-371 (373)
31 2dzn_A Probable 26S proteasome 100.0 1.8E-29 6E-34 237.6 20.1 190 204-399 3-205 (228)
32 4g8k_A 2-5A-dependent ribonucl 100.0 4.1E-29 1.4E-33 250.0 23.0 248 170-455 61-329 (337)
33 2rfa_A Transient receptor pote 100.0 1.6E-29 5.3E-34 238.9 16.3 186 204-395 4-223 (232)
34 3hra_A Ankyrin repeat family p 100.0 5.1E-29 1.7E-33 229.9 17.8 181 204-392 6-201 (201)
35 2dzn_A Probable 26S proteasome 100.0 4.7E-29 1.6E-33 234.7 17.9 208 170-390 4-226 (228)
36 1ikn_D Protein (I-kappa-B-alph 100.0 4.3E-30 1.5E-34 243.6 10.3 187 201-396 6-211 (236)
37 3eu9_A Huntingtin-interacting 100.0 9.3E-29 3.2E-33 234.0 19.1 215 170-395 11-236 (240)
38 2f8y_A Notch homolog 1, transl 100.0 3.5E-29 1.2E-33 234.9 15.9 202 218-453 10-217 (223)
39 4gpm_A Engineered protein OR26 100.0 7.7E-29 2.6E-33 222.7 16.9 154 275-454 6-163 (169)
40 2etb_A Transient receptor pote 100.0 1.6E-29 5.3E-34 242.8 12.8 186 204-395 3-247 (256)
41 3kea_A K1L; tropism, ANK repea 100.0 2.6E-29 8.9E-34 245.6 12.2 208 169-396 32-248 (285)
42 2rfa_A Transient receptor pote 100.0 1.7E-28 5.9E-33 231.7 16.6 196 231-454 2-224 (232)
43 1s70_B 130 kDa myosin-binding 100.0 8E-29 2.8E-33 243.2 14.4 188 204-399 41-262 (299)
44 1s70_B 130 kDa myosin-binding 100.0 7.1E-29 2.4E-33 243.6 12.5 201 169-380 41-276 (299)
45 2pnn_A Transient receptor pote 100.0 1E-28 3.5E-33 239.6 13.1 190 201-396 11-261 (273)
46 2vge_A RELA-associated inhibit 100.0 3.6E-29 1.2E-33 236.6 7.5 190 256-477 4-200 (229)
47 3hra_A Ankyrin repeat family p 100.0 1.3E-27 4.3E-32 220.5 17.4 189 230-450 3-201 (201)
48 1ikn_D Protein (I-kappa-B-alph 100.0 2.7E-28 9.1E-33 231.3 12.3 212 228-472 4-226 (236)
49 2etb_A Transient receptor pote 100.0 1.2E-28 4.1E-33 236.6 9.9 201 231-454 1-248 (256)
50 2rfm_A Putative ankyrin repeat 100.0 7.1E-28 2.4E-32 220.9 14.5 158 227-393 30-191 (192)
51 3jxi_A Vanilloid receptor-rela 100.0 3.6E-28 1.2E-32 233.7 12.7 125 270-395 90-251 (260)
52 2pnn_A Transient receptor pote 99.9 1.4E-28 4.9E-33 238.5 8.7 211 224-454 5-261 (273)
53 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.4E-27 8.2E-32 212.9 16.0 154 230-392 12-169 (169)
54 1sw6_A Regulatory protein SWI6 99.9 8.4E-29 2.9E-33 246.9 7.0 242 181-475 32-326 (327)
55 3eu9_A Huntingtin-interacting 99.9 5.3E-27 1.8E-31 221.8 18.1 219 202-453 8-236 (240)
56 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.4E-27 8.1E-32 210.9 14.0 153 232-394 5-162 (162)
57 3v31_A Ankyrin repeat family A 99.9 4.2E-27 1.4E-31 210.6 15.6 156 231-395 2-161 (167)
58 4hbd_A KN motif and ankyrin re 99.9 1.5E-27 5E-32 232.1 12.3 179 205-392 78-273 (276)
59 3v30_A DNA-binding protein rfx 99.9 3.5E-27 1.2E-31 212.2 13.7 159 232-399 2-165 (172)
60 3jxi_A Vanilloid receptor-rela 99.9 5.2E-28 1.8E-32 232.6 8.1 205 230-454 3-252 (260)
61 1d9s_A Cyclin-dependent kinase 99.9 3.3E-27 1.1E-31 204.0 11.1 130 260-394 2-136 (136)
62 1awc_B Protein (GA binding pro 99.9 2.4E-26 8.1E-31 202.7 15.3 145 234-388 4-152 (153)
63 3twr_A Tankyrase-2; ankyrin re 99.9 3.8E-26 1.3E-30 203.9 14.8 155 270-451 5-164 (165)
64 3f6q_A Integrin-linked protein 99.9 1.7E-26 5.7E-31 209.3 12.5 159 231-397 4-166 (179)
65 3twr_A Tankyrase-2; ankyrin re 99.9 1.3E-26 4.4E-31 207.0 11.6 154 231-393 7-164 (165)
66 2rfm_A Putative ankyrin repeat 99.9 4.4E-26 1.5E-30 208.9 14.5 129 270-399 32-164 (192)
67 3v30_A DNA-binding protein rfx 99.9 5.2E-26 1.8E-30 204.5 14.6 156 273-454 2-162 (172)
68 1sw6_A Regulatory protein SWI6 99.9 1.2E-26 4E-31 231.3 9.0 190 170-380 99-327 (327)
69 3v31_A Ankyrin repeat family A 99.9 2.2E-25 7.6E-30 199.3 15.6 156 272-453 2-161 (167)
70 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.3E-25 4.3E-30 199.7 13.3 155 271-452 3-162 (162)
71 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.1E-25 7.1E-30 197.1 14.5 148 233-391 3-155 (156)
72 3f6q_A Integrin-linked protein 99.9 3.3E-25 1.1E-29 200.8 15.8 158 271-454 3-165 (179)
73 2y1l_E Darpin-8.4; hydrolase-i 99.9 4.2E-25 1.4E-29 198.1 16.2 129 270-399 11-143 (169)
74 2jab_A H10-2-G3; HER2, darpin, 99.9 3.1E-25 1.1E-29 191.6 13.9 122 270-392 11-136 (136)
75 1awc_B Protein (GA binding pro 99.9 4.9E-25 1.7E-29 194.2 15.2 126 273-399 2-130 (153)
76 1ycs_B 53BP2, P53BP2; ankyrin 99.9 8.2E-26 2.8E-30 214.9 10.0 162 270-454 2-166 (239)
77 1bi7_B P16INK4A, MTS1, multipl 99.9 8.7E-26 3E-30 199.9 9.4 128 270-399 9-141 (156)
78 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.1E-25 3.6E-30 214.1 10.4 158 230-397 3-167 (239)
79 4hbd_A KN motif and ankyrin re 99.9 8E-25 2.7E-29 212.7 16.5 182 234-449 78-272 (276)
80 3htm_A Speckle-type POZ protei 99.9 3.4E-25 1.2E-29 199.6 12.7 152 45-233 16-167 (172)
81 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.2E-24 4.1E-29 184.3 14.6 122 272-394 1-126 (126)
82 3c5r_A BARD-1, BRCA1-associate 99.9 9.9E-26 3.4E-30 194.9 7.2 129 260-393 1-133 (137)
83 3t8k_A Uncharacterized protein 99.9 1.8E-25 6.1E-30 204.0 7.3 149 234-393 8-178 (186)
84 1bd8_A P19INK4D CDK4/6 inhibit 99.9 8.6E-24 2.9E-28 186.6 14.3 123 273-398 2-129 (156)
85 3hve_A Gigaxonin; ubiquitin, c 99.9 2.4E-24 8.1E-29 206.9 11.5 169 43-248 11-183 (256)
86 4eoz_A Speckle-type POZ protei 99.9 1.4E-24 4.8E-29 189.8 6.9 138 45-219 7-144 (145)
87 3aaa_C Myotrophin, protein V-1 99.9 5.7E-24 1.9E-28 180.2 9.7 109 269-378 3-115 (123)
88 3i3n_A Kelch-like protein 11; 99.9 2.7E-24 9.1E-29 209.2 7.7 160 44-234 13-175 (279)
89 2vge_A RELA-associated inhibit 99.9 2.5E-26 8.4E-31 217.1 -7.5 178 201-390 19-209 (229)
90 1bi7_B P16INK4A, MTS1, multipl 99.9 8E-24 2.7E-28 187.2 8.7 138 229-376 9-151 (156)
91 3hqi_A Speckle-type POZ protei 99.9 3.3E-23 1.1E-27 204.9 13.2 152 45-233 156-307 (312)
92 2if5_A Zinc finger and BTB dom 99.9 3.3E-23 1.1E-27 174.9 11.1 114 44-191 6-119 (120)
93 2ppi_A Gigaxonin; BTB domain, 99.9 5.4E-23 1.8E-27 179.0 12.0 120 40-191 24-143 (144)
94 3ehr_A Osteoclast-stimulating 99.9 1.7E-23 5.6E-28 196.4 8.3 127 270-396 70-200 (222)
95 2z8h_A Transcription regulator 99.9 1.1E-22 3.6E-27 176.1 12.6 118 43-196 16-134 (138)
96 1d9s_A Cyclin-dependent kinase 99.9 3.9E-23 1.3E-27 178.3 8.1 128 224-361 4-136 (136)
97 3deo_A Signal recognition part 99.9 5.1E-23 1.7E-27 187.1 9.0 120 270-391 41-165 (183)
98 1r29_A B-cell lymphoma 6 prote 99.9 3.2E-22 1.1E-26 170.5 12.5 116 43-193 9-125 (127)
99 3b84_A Zinc finger and BTB dom 99.9 3.1E-22 1.1E-26 168.4 11.2 111 45-193 6-116 (119)
100 3ui2_A Signal recognition part 99.9 1.6E-22 5.4E-27 192.8 10.2 110 270-381 42-156 (244)
101 2yy9_A Zinc finger and BTB dom 99.9 3.6E-22 1.2E-26 171.9 10.4 115 44-196 6-120 (135)
102 3t8k_A Uncharacterized protein 99.9 5.5E-23 1.9E-27 187.4 5.4 127 272-399 5-151 (186)
103 1n0q_A 3ANK, 3 ankyrin repeats 99.9 9.3E-22 3.2E-26 157.8 11.4 93 301-394 1-93 (93)
104 2aja_A Ankyrin repeat family p 99.9 1.7E-23 5.8E-28 211.5 0.9 149 234-395 94-251 (376)
105 1buo_A POZ domain, protein (pr 99.9 6.9E-22 2.4E-26 166.9 9.7 111 44-193 9-119 (121)
106 2vpk_A Myoneurin; transcriptio 99.9 1.3E-21 4.3E-26 164.0 11.2 110 45-192 4-115 (116)
107 3ohu_A Transcription regulator 99.9 1.2E-22 4E-27 172.8 4.1 113 43-190 12-124 (125)
108 1dcq_A PYK2-associated protein 99.9 2.8E-21 9.6E-26 187.7 14.4 125 270-395 127-264 (278)
109 2aja_A Ankyrin repeat family p 99.9 1.6E-23 5.3E-28 211.8 -1.7 183 176-385 74-270 (376)
110 2q81_A MIZ-1 protein; BTB/POZ 99.9 8.7E-22 3E-26 165.7 8.8 110 44-192 8-117 (119)
111 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.6E-21 1.6E-25 162.1 12.9 121 232-361 2-126 (126)
112 2ihc_A Transcription regulator 99.8 2.1E-22 7.1E-27 170.8 4.1 112 44-191 10-122 (124)
113 2vkp_A BTB/POZ domain-containi 99.8 1.3E-21 4.6E-26 162.0 8.7 102 57-193 2-107 (109)
114 2jab_A H10-2-G3; HER2, darpin, 99.8 3.6E-21 1.2E-25 165.9 11.7 120 231-359 13-136 (136)
115 3lvq_E ARF-GAP with SH3 domain 99.8 4.5E-21 1.5E-25 201.9 14.2 126 273-399 132-270 (497)
116 2b0o_E UPLC1; arfgap, structur 99.8 1.2E-21 4.2E-26 192.5 8.6 138 233-382 152-299 (301)
117 3jue_A Arfgap with coiled-coil 99.8 6.7E-21 2.3E-25 191.8 13.3 123 270-393 196-325 (368)
118 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.4E-20 4.8E-25 150.9 11.6 89 272-361 1-93 (93)
119 2b0o_E UPLC1; arfgap, structur 99.8 1E-20 3.5E-25 185.9 13.0 122 271-393 149-283 (301)
120 3c5r_A BARD-1, BRCA1-associate 99.8 2.3E-20 7.8E-25 160.9 12.6 101 298-399 6-106 (137)
121 2l6b_A NR1C; ankyrin, consensu 99.8 3.6E-21 1.2E-25 160.7 7.2 104 269-373 5-112 (115)
122 3ga1_A Nucleus accumbens-assoc 99.8 2.1E-21 7.2E-26 165.9 5.4 114 43-194 13-127 (129)
123 3fkc_A Transcriptional regulat 99.8 2.9E-20 1E-24 155.4 11.1 104 43-185 11-115 (116)
124 3ui2_A Signal recognition part 99.8 3.9E-22 1.3E-26 190.1 -1.3 165 271-451 13-184 (244)
125 3aaa_C Myotrophin, protein V-1 99.8 7.8E-20 2.7E-24 154.5 11.6 101 298-399 3-103 (123)
126 3deo_A Signal recognition part 99.8 3.4E-20 1.2E-24 168.4 9.2 134 231-391 43-181 (183)
127 3ehr_A Osteoclast-stimulating 99.8 1.8E-20 6.1E-25 175.6 6.0 133 229-370 70-207 (222)
128 3lvq_E ARF-GAP with SH3 domain 99.8 2.4E-19 8.4E-24 188.6 12.6 133 234-372 134-276 (497)
129 2l6b_A NR1C; ankyrin, consensu 99.8 9.8E-20 3.4E-24 151.9 7.5 100 298-398 5-104 (115)
130 3m5b_A Zinc finger and BTB dom 99.8 9.7E-20 3.3E-24 152.7 6.6 103 46-193 15-117 (119)
131 3jue_A Arfgap with coiled-coil 99.8 5.3E-19 1.8E-23 177.9 12.2 144 230-380 197-348 (368)
132 2zgd_A 3 repeat synthetic anky 99.8 7.8E-19 2.7E-23 145.4 9.5 91 297-388 19-109 (110)
133 1dcq_A PYK2-associated protein 99.7 4.9E-18 1.7E-22 164.8 12.0 105 257-362 150-264 (278)
134 2zgd_A 3 repeat synthetic anky 99.7 6.2E-17 2.1E-21 133.9 10.3 86 269-355 20-109 (110)
135 2ast_A S-phase kinase-associat 99.1 2.4E-10 8.1E-15 100.4 9.0 116 68-196 3-127 (159)
136 4ajy_C Transcription elongatio 98.9 3.6E-09 1.2E-13 84.5 7.3 82 68-179 4-96 (97)
137 1fs1_B SKP1, cyclin A/CDK2-ass 98.5 2.6E-07 8.7E-12 79.1 7.9 112 68-196 4-122 (141)
138 2p1m_A SKP1-like protein 1A; F 98.2 1.2E-07 4E-12 83.0 -0.6 113 68-196 6-126 (160)
139 1hv2_A Elongin C, ELC1; protei 97.9 4.1E-05 1.4E-09 60.8 8.8 93 68-180 6-99 (99)
140 3drz_A BTB/POZ domain-containi 97.9 6.6E-05 2.3E-09 60.6 9.3 97 67-191 7-104 (107)
141 2fnj_C Transcription elongatio 97.7 7.1E-05 2.4E-09 59.1 6.0 90 68-180 3-96 (96)
142 3v7d_A Suppressor of kinetocho 97.4 0.00086 3E-08 58.8 9.8 121 67-196 8-134 (169)
143 3drx_A BTB/POZ domain-containi 96.8 0.0056 1.9E-07 54.6 9.8 101 68-196 14-115 (202)
144 1vcb_B Protein (elongin C); tu 96.7 0.002 7E-08 52.1 5.2 91 67-180 18-112 (112)
145 3kvt_A Potassium channel prote 93.3 0.1 3.4E-06 42.2 4.9 85 68-183 7-92 (115)
146 1s1g_A Potassium voltage-gated 92.6 0.23 7.8E-06 40.7 6.2 87 67-184 14-100 (124)
147 1t1d_A Protein (potassium chan 92.3 0.18 6E-06 39.6 5.0 86 68-184 3-90 (100)
148 2nz0_B Potassium voltage-gated 90.4 0.27 9.4E-06 41.1 4.5 87 66-183 35-121 (140)
149 1nn7_A Potassium channel KV4.2 87.8 0.66 2.3E-05 36.7 4.8 85 68-183 2-86 (105)
150 2eqx_A Kelch repeat and BTB do 77.3 1.4 4.9E-05 34.6 2.8 45 200-244 10-56 (105)
151 2r9r_B Paddle chimera voltage 44.3 22 0.00075 36.5 5.0 88 67-184 53-141 (514)
152 2yy9_A Zinc finger and BTB dom 30.0 38 0.0013 27.4 3.4 36 200-235 89-124 (135)
153 1gp8_A Protein (scaffolding pr 27.1 47 0.0016 20.5 2.4 17 277-293 17-33 (40)
154 3twe_A Alpha4H; unknown functi 21.3 73 0.0025 17.2 2.2 18 490-507 6-23 (27)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.6e-34 Score=294.62 Aligned_cols=216 Identities=19% Similarity=0.144 Sum_probs=163.0
Q ss_pred HHHHHHHhcChHHHHHHHHHhccchhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhhH
Q 010293 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEVS 245 (513)
Q Consensus 170 ~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~~ 245 (513)
..|+.|...+..++++++++.+.+++.++ ..+.++||+|+..+..+ |++.+.+....+..+.|+++.++..+.
T Consensus 82 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~- 158 (437)
T 1n11_A 82 TPLHCAARIGHTNMVKLLLENNANPNLAT--TAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGK- 158 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCCC--TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC-
T ss_pred CHHHHHHHCCCHHHHHHHHhCCCCCCCCC--CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCC-
Confidence 46777888888888888888887776653 33477888888877744 444445555556677788887777777
Q ss_pred HHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHH
Q 010293 246 GEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEV 321 (513)
Q Consensus 246 ~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~L 321 (513)
.+++++| +++|++++.. +..|.||||+|+..|+.+++++|+++| ++ +..|.||||+|+..|+.++++.|
T Consensus 159 ~~~v~~L----l~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 231 (437)
T 1n11_A 159 VRVAELL----LERDAHPNAA---GKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSL 231 (437)
T ss_dssp HHHHHHH----HHTTCCTTCC---CSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHH----HhCCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4555655 6667777777 777888888888888888888888877 33 35678888888888888888888
Q ss_pred HHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcc
Q 010293 322 LNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 396 (513)
Q Consensus 322 l~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 396 (513)
++.+ +++|.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|.+++
T Consensus 232 l~~g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 305 (437)
T 1n11_A 232 LQYG-GSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD 305 (437)
T ss_dssp HHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred HHcC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCC
Confidence 8777 7888888888888888888888888888888888888888888888888888888888888888777654
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.5e-33 Score=290.76 Aligned_cols=312 Identities=19% Similarity=0.163 Sum_probs=250.5
Q ss_pred HHHHHHHHhcChHHHHHHHHHhccchhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhh
Q 010293 169 IELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEV 244 (513)
Q Consensus 169 ~~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~ 244 (513)
...|+.|+.+|..++++++++.+.+++.++ ..+.|+||+|+..++.+ |++.+++++.++..+.||++.|+..+.
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~--~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 92 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQRGASPNVSN--VKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGH 92 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCSS--SCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTC
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCCCC--CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCC
Confidence 468999999999999999999998887653 34589999999999854 677777788888899999999999888
Q ss_pred HHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCccHHHHHHHcCCHHHHHH
Q 010293 245 SGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-N---VTLDDAYALHYAAAYCNPKVFKE 320 (513)
Q Consensus 245 ~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~---~~~~g~tpLh~A~~~g~~~~v~~ 320 (513)
.+++++| +++|++++.. +..|.||||+|+..|+.++|++|+++| + .+..|.||||+|+..|+.+++++
T Consensus 93 -~~~v~~L----l~~ga~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 164 (437)
T 1n11_A 93 -TNMVKLL----LENNANPNLA---TTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAEL 164 (437)
T ss_dssp -HHHHHHH----HHHTCCTTCC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred -HHHHHHH----HhCCCCCCCC---CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 6677777 7889999988 889999999999999999999999998 3 35789999999999999999999
Q ss_pred HHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcccc--
Q 010293 321 VLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKD-- 398 (513)
Q Consensus 321 Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~-- 398 (513)
|++++ ++++..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.++++.|++.|.+++..
T Consensus 165 Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 243 (437)
T 1n11_A 165 LLERD-AHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESV 243 (437)
T ss_dssp HHHTT-CCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHhCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 99998 999999999999999999999999999999999999999999999999999999999999999988776532
Q ss_pred -----------cchHHHHHHHHhcc--c----CCCCcccchhhhc-------------------cccchhhhhh---hhh
Q 010293 399 -----------RLCIDVLEREMRRN--S----MSGNLALSSEVMA-------------------DDFQMKLNYL---ENR 439 (513)
Q Consensus 399 -----------~~~~~~l~~~~~~~--p----~~~~~~~~~~~~~-------------------~~~~~~~l~l---~~~ 439 (513)
..+.++++..+... + ..|.++++.+... +..+.+++++ .++
T Consensus 244 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 323 (437)
T 1n11_A 244 QGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGN 323 (437)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCc
Confidence 22345555543321 1 1344444444332 2334555655 567
Q ss_pred hhhhhhccccccchhhhhhcccCCccccccccccCCC----------CCCCccccc-CCCChHHHHHH
Q 010293 440 VAFARLLFPSEARVAMHIADADATNFYTGLSASKSKG----------SSGNLKEVD-LNETPSMQAKR 496 (513)
Q Consensus 440 ~~~~~~l~~~~a~~~~~~a~~~~~~~~~~l~~a~~~~----------~~~~~~~~d-~~~~~~~~~~~ 496 (513)
.+++++|+++|++++ .....+.|||+.|+..+ .+++.+..| -..||+..+.+
T Consensus 324 ~~~v~~Ll~~gad~n-----~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~ 386 (437)
T 1n11_A 324 IKLVKFLLQHQADVN-----AKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKR 386 (437)
T ss_dssp SHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHH
T ss_pred HHHHHHHHhcCCCCC-----CCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHH
Confidence 888899999998887 66778899999987766 444444333 36788887764
No 3
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.3e-32 Score=263.65 Aligned_cols=252 Identities=21% Similarity=0.106 Sum_probs=218.4
Q ss_pred HHHHHHHHhcChHHHHHHHHHhccchhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhh
Q 010293 169 IELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEV 244 (513)
Q Consensus 169 ~~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~ 244 (513)
..+|+.|...+..++++++++.+.+++.+. ...+.|+||+|+..+..+ |++.++++..++..+.|+++.++..+.
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 84 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQE-EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGS 84 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCccccc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCC
Confidence 578999999999999999999998887642 234579999999999855 667777777888999999999998888
Q ss_pred HHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC-------------CCCCccHHHHHH
Q 010293 245 SGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV-------------TLDDAYALHYAA 310 (513)
Q Consensus 245 ~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~-------------~~~g~tpLh~A~ 310 (513)
.++++++ +++|++++.. |..|.||||+|+..|+.+++++|+++| ++ +..|.||||+|+
T Consensus 85 -~~~v~~L----l~~g~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 156 (285)
T 1wdy_A 85 -VKLLKLF----LSKGADVNEC---DFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAA 156 (285)
T ss_dssp -HHHHHHH----HHTTCCTTCB---CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHH
T ss_pred -HHHHHHH----HHcCCCCCcc---CcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHH
Confidence 6677777 7789999988 899999999999999999999999999 44 456899999999
Q ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCC----HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHH
Q 010293 311 AYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKE----PAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYI 386 (513)
Q Consensus 311 ~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~----~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~ 386 (513)
..|+.+++++|++..+++++.+|..|+||||+|+..++ .+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 157 ~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 236 (285)
T 1wdy_A 157 EKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQ 236 (285)
T ss_dssp HHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 99999999999998449999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHh-cCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccchhhhhhhhhhhhhhhccccccchh
Q 010293 387 EATK-QGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPSEARVA 454 (513)
Q Consensus 387 ~l~~-~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~~a~~~ 454 (513)
.|++ .|.+++..+ ..|.+++..+.. .++.+++++|+++||+++
T Consensus 237 ~Ll~~~g~~~~~~~--------------~~g~t~l~~A~~-----------~~~~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 237 RLLEQEHIEINDTD--------------SDGKTALLLAVE-----------LKLKKIAELLCKRGASTD 280 (285)
T ss_dssp HHHHSSSCCTTCCC--------------TTSCCHHHHHHH-----------TTCHHHHHHHHHHSSCSC
T ss_pred HHHhccCCCccccC--------------CCCCcHHHHHHH-----------cCcHHHHHHHHHcCCCCC
Confidence 9999 788765444 234444444433 245889999999999886
No 4
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=8.6e-32 Score=269.45 Aligned_cols=213 Identities=20% Similarity=0.096 Sum_probs=126.2
Q ss_pred HHHHHHHHhcChHHHHHHHHHhccchhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhh
Q 010293 169 IELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEV 244 (513)
Q Consensus 169 ~~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~ 244 (513)
..+|+.|.+.+..++++++++.|++++.++ ..++.||||+|+..++.+ |+++++++..++..+.++++.+.....
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~-~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 104 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQE-EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGS 104 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCccC-CCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhccc
Confidence 468999999999999999999999988653 234589999999999855 666666666555555555554444444
Q ss_pred HHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CCC-------------CCCccHHHHHH
Q 010293 245 SGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NVT-------------LDDAYALHYAA 310 (513)
Q Consensus 245 ~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~~-------------~~g~tpLh~A~ 310 (513)
..+...+ +.++++++.. |..|.||||+|+..|+.+++++|+++| +++ ..|.||||+|+
T Consensus 105 -~~~~~~~----~~~~~~~~~~---d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~ 176 (337)
T 4g8k_A 105 -VKLLKLF----LSKGADVNEC---DFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAA 176 (337)
T ss_dssp -HHHHHHH----HTTTCCTTCB---CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHH
T ss_pred -chhhHHh----hhccchhhhh---ccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHH
Confidence 2222222 3344555554 555555555555555555555555555 221 23555555555
Q ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCC----HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHH
Q 010293 311 AYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKE----PAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYI 386 (513)
Q Consensus 311 ~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~----~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~ 386 (513)
..|+.+++++||.+.|+++|.+|..|+||||.++..++ ..++++|+++|+|+|.+|..|+||||+|+..|+.+.++
T Consensus 177 ~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~ 256 (337)
T 4g8k_A 177 EKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQ 256 (337)
T ss_dssp HHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHH
T ss_pred HCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHH
Confidence 55555555555544335555555555555555443322 23445555555555555555555555555555555555
Q ss_pred HHHh
Q 010293 387 EATK 390 (513)
Q Consensus 387 ~l~~ 390 (513)
.|+.
T Consensus 257 ~Ll~ 260 (337)
T 4g8k_A 257 RLLE 260 (337)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 5554
No 5
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.98 E-value=3.4e-32 Score=262.48 Aligned_cols=232 Identities=15% Similarity=0.082 Sum_probs=188.9
Q ss_pred chhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHH
Q 010293 203 VIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIH 278 (513)
Q Consensus 203 ~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh 278 (513)
+.|+||+|+..|..+ |++.+++++.++..+.|+++.|+..+. .++++++ +++|++++.+ |..|+||||
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~-~~~v~~L----l~~g~~~~~~---~~~g~t~L~ 74 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGH-LSCVKIL----LKHGAQVNGV---TADWHTPLF 74 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTC-HHHHHHH----HHTTCCTTCC---CTTSCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHH----HHCCCCCCCC---CCCCCCHHH
Confidence 368899999888744 666667777788888999998888888 5666666 6789999988 899999999
Q ss_pred HHHhcCCHHHHHHHHHcC-CC--CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHH
Q 010293 279 KALDSDDVELLKLLLDES-NV--TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTL 355 (513)
Q Consensus 279 ~A~~~g~~~~v~~Ll~~g-~~--~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~L 355 (513)
+|+..|+.+++++|+++| ++ +.+|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 153 (261)
T 2xai_A 75 NACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKL 153 (261)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHhCCHHHHHHH
Confidence 999999999999999999 44 467999999999999999999999998 99999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccchhhhh
Q 010293 356 LSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNY 435 (513)
Q Consensus 356 l~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~ 435 (513)
+++|++++. +..|+||||+|+..|+.+++++|++.|++++..+ ..|.+++..+. .+
T Consensus 154 l~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d--------------~~g~tpl~~A~--~~------- 209 (261)
T 2xai_A 154 LESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKN--------------AEGKRPVELVP--PE------- 209 (261)
T ss_dssp HHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCC--------------TTSCCGGGGSC--TT-------
T ss_pred HHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcC--------------CCCCChhhhcc--cc-------
Confidence 999999995 8999999999999999999999999999876544 33444444333 22
Q ss_pred hhhhhhhhhhccccccchhh----hhhcccCCccccccccc
Q 010293 436 LENRVAFARLLFPSEARVAM----HIADADATNFYTGLSAS 472 (513)
Q Consensus 436 l~~~~~~~~~l~~~~a~~~~----~~a~~~~~~~~~~l~~a 472 (513)
-+++++|+++++...+ ++. .+...|.|+|+.+
T Consensus 210 ----~~~~~~ll~~~~~~~l~~~~~~~-~r~~~g~t~l~~~ 245 (261)
T 2xai_A 210 ----SPLAQLFLEREGPPSLMQLCRLR-IRKCFGIQQHHKI 245 (261)
T ss_dssp ----CTHHHHHHHC-CCCCHHHHHHHH-HHTTSCTTCGGGG
T ss_pred ----ccHHHHHHhccCCccHHHHHHHH-HHHHhchhccccC
Confidence 2355666665543221 111 4456788999988
No 6
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=1.2e-31 Score=262.16 Aligned_cols=158 Identities=17% Similarity=0.106 Sum_probs=84.9
Q ss_pred ccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCc
Q 010293 228 RSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDA 303 (513)
Q Consensus 228 ~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~ 303 (513)
++..|.|+++.|+..+. .++++.+ +++|++++.+ |.+|+||||+|+..|+.++|++|+++| ++ |..|+
T Consensus 55 ~~~~g~t~L~~Aa~~g~-~~~v~~L----l~~g~~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~ 126 (285)
T 3d9h_A 55 DAVSDWSPMHEAAIHGH-QLSLRNL----ISQGWAVNII---TADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWH 126 (285)
T ss_dssp SSCCSCCHHHHHHHTTC-HHHHHHH----HHTTCCSCEE---CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCC
T ss_pred CCccCCCHHHHHHHcCC-HHHHHHH----HHCCCCCCCc---CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCC
Confidence 34445555555555554 3333333 3445555544 555555555555555555555555555 22 34455
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcc
Q 010293 304 YALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRK 383 (513)
Q Consensus 304 tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~ 383 (513)
||||+|+..|+.+++++|++.+ ++++..+ .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 204 (285)
T 3d9h_A 127 TPLFNACVSGSWDCVNLLLQHG-ASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA 204 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTT-CCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCHHHHHHHHHHCC-CCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 5555555555555555555554 5555332 2555555555555555555555555555555555555555555555555
Q ss_pred cHHHHHhcCCCc
Q 010293 384 DYIEATKQGQET 395 (513)
Q Consensus 384 ~v~~l~~~g~~~ 395 (513)
++++|++.|+++
T Consensus 205 ~v~~Ll~~ga~~ 216 (285)
T 3d9h_A 205 CVKKLLESGADV 216 (285)
T ss_dssp HHHHHHHTTCCT
T ss_pred HHHHHHHCCCCC
Confidence 555555555543
No 7
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=1.4e-31 Score=261.69 Aligned_cols=247 Identities=15% Similarity=0.058 Sum_probs=186.6
Q ss_pred HHHHHHHHhcChH-HHHHHHHHh---------cc-chhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCc
Q 010293 169 IELMYASAAFQMK-ELVLLFQRR---------LL-NFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDD 233 (513)
Q Consensus 169 ~~lL~~A~~~~~~-~L~~~~~~~---------l~-~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~ 233 (513)
..++|.|...|.. ++.++.... .. ..+.+ ..++.|+||+|+..+..+ |++.+.+++.++..+.
T Consensus 16 ~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~ 93 (285)
T 3d9h_A 16 PRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGD--AVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHV 93 (285)
T ss_dssp --------------------------CCSEECCCCTTCSS--SCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCC
T ss_pred HHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCC--CccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 4678888888774 455433221 11 12222 455689999999999854 6677777888899999
Q ss_pred chhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC--CCCCccHHHHHH
Q 010293 234 VCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV--TLDDAYALHYAA 310 (513)
Q Consensus 234 t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~--~~~g~tpLh~A~ 310 (513)
|+++.|+..+. .+++++| +++|++++.+ |..|.||||+|+..|+.+++++|+++| ++ +..|.||||+|+
T Consensus 94 t~L~~A~~~g~-~~~v~~L----l~~ga~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~ 165 (285)
T 3d9h_A 94 SPLHEACLGGH-LSCVKIL----LKHGAQVNGV---TADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAA 165 (285)
T ss_dssp CHHHHHHHTTC-HHHHHHH----HHTTCCSSCC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHH
T ss_pred CHHHHHHHCCc-HHHHHHH----HHCCCCCCCC---CCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
Confidence 99999999888 6677777 7789999988 899999999999999999999999999 44 467999999999
Q ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHh
Q 010293 311 AYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATK 390 (513)
Q Consensus 311 ~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~ 390 (513)
..|+.+++++|++.+ ++++.+|..|+||||+|+..|+.+++++|+++|++++. |..|+||||+|+..|+.+++++|++
T Consensus 166 ~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~ 243 (285)
T 3d9h_A 166 RRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMD 243 (285)
T ss_dssp HHTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999998 99999999999999999999999999999999999995 9999999999999999999999999
Q ss_pred cCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccchhhhhhhhhhhhhhhcccc-ccchh
Q 010293 391 QGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPS-EARVA 454 (513)
Q Consensus 391 ~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~-~a~~~ 454 (513)
.|+++...+ ..|.+++.++ .. +.+++++|+++ |+++.
T Consensus 244 ~gad~~~~d--------------~~g~t~l~~A--~~-----------~~~~~~~Ll~~~~a~l~ 281 (285)
T 3d9h_A 244 FGADTQAKN--------------AEGKRPVELV--PP-----------ESPLAQLFLEREGASLP 281 (285)
T ss_dssp TTCCTTCCC--------------TTSCCGGGGS--CT-----------TSHHHHHHHHHC-----
T ss_pred CCCCCCCcC--------------CCCCCHHHHh--cC-----------ccHHHHHHHHhhccCCC
Confidence 999876544 2344444433 22 24677888877 66554
No 8
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=4.2e-31 Score=264.77 Aligned_cols=220 Identities=23% Similarity=0.155 Sum_probs=185.6
Q ss_pred HHHHHHHHhcChHH-HHHHHHHhccchhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChh
Q 010293 169 IELMYASAAFQMKE-LVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDE 243 (513)
Q Consensus 169 ~~lL~~A~~~~~~~-L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~ 243 (513)
.+.|+.|...+..+ +..++.+.+.+++.++ ..+.|+||+|+..+..+ |++.+++++.++..+.||++.|+..+
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d--~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 102 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTPLNVNCHASD--GRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYG 102 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCSS--TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred chhHHHHHHcCCHHHHHHHHHhcCCCcccCC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCC
Confidence 44555566555555 5555555677766653 44589999999999844 67777888888899999999999988
Q ss_pred hHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CCC-----------------------
Q 010293 244 VSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NVT----------------------- 299 (513)
Q Consensus 244 ~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~~----------------------- 299 (513)
. .+++++| +++|++++.. |..|.||||+|+..|+.+++++|+++| +++
T Consensus 103 ~-~~iv~~L----l~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~ 174 (351)
T 3utm_A 103 H-YEVTELL----LKHGACVNAM---DLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLT 174 (351)
T ss_dssp C-HHHHHHH----HHTTCCTTCC---CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHH
T ss_pred C-HHHHHHH----HHCCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHH
Confidence 8 6677777 7889999988 899999999999999999999999998 432
Q ss_pred ----------------------------------CCCccHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCchHHHH
Q 010293 300 ----------------------------------LDDAYALHYAAAY---CNPKVFKEVLNMGLADLNLKNARGHTVLHV 342 (513)
Q Consensus 300 ----------------------------------~~g~tpLh~A~~~---g~~~~v~~Ll~~~~advn~~d~~g~tpLh~ 342 (513)
..|.||||+|+.. +..+++++|+..| +++|.+|..|+||||+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~ 253 (351)
T 3utm_A 175 YEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG-ANVNEKNKDFMTPLHV 253 (351)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT-CCTTCCCTTCCCHHHH
T ss_pred hhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcC-CCcCCcCCCCCCHHHH
Confidence 3567999999998 4578999999988 9999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCccccc
Q 010293 343 AARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDR 399 (513)
Q Consensus 343 A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~ 399 (513)
|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|++.|+++...+
T Consensus 254 A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~ 310 (351)
T 3utm_A 254 AAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIIS 310 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcC
Confidence 999999999999999999999999999999999999999999999999999876544
No 9
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=3.2e-31 Score=238.21 Aligned_cols=153 Identities=27% Similarity=0.315 Sum_probs=136.9
Q ss_pred hhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHH
Q 010293 235 CLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAA 310 (513)
Q Consensus 235 ~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~ 310 (513)
++..|+..+. .++++.| +++|+|+|.+ |.+|+||||+|+..++.+++++|++.| ++ |.+|+||||+|+
T Consensus 7 ~L~~Aa~~G~-~~~v~~L----l~~Gadvn~~---d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~ 78 (169)
T 4gpm_A 7 RLIEAAENGN-KDRVKDL----IENGADVNAS---DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAA 78 (169)
T ss_dssp HHHHHHHTTC-HHHHHHH----HHTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHH----HHCCCCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHH
Confidence 3555666666 4555555 6789999988 999999999999999999999999999 55 478999999999
Q ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHh
Q 010293 311 AYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATK 390 (513)
Q Consensus 311 ~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~ 390 (513)
..|+.+++++|+++| +++|.+|.+|+||||+|+..|+.++|++|+++|+|++.+|..|+||||+|+..|+.+++++|++
T Consensus 79 ~~g~~~~v~~Ll~~g-advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 157 (169)
T 4gpm_A 79 ENGHKEVVKLLISKG-ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEK 157 (169)
T ss_dssp HTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HcCCHHHHHHHHHCc-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcc
Q 010293 391 QGQETN 396 (513)
Q Consensus 391 ~g~~~~ 396 (513)
+|+++.
T Consensus 158 ~GA~ie 163 (169)
T 4gpm_A 158 QGGWLE 163 (169)
T ss_dssp C-----
T ss_pred CCCCcC
Confidence 999764
No 10
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=2.2e-30 Score=251.62 Aligned_cols=222 Identities=20% Similarity=0.168 Sum_probs=199.0
Q ss_pred HHHHHHHhcChHHHHHHHHHhccchhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhhH
Q 010293 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEVS 245 (513)
Q Consensus 170 ~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~~ 245 (513)
..|+.|...+..++++++++.+.+++.++ .++.|+||+|+..+..+ |++.+.++...+..+.|+++.++..+.
T Consensus 41 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~- 117 (285)
T 1wdy_A 41 TPLHNAVQMSREDIVELLLRHGADPVLRK--KNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK- 117 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCC--TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTC-
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcccC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCC-
Confidence 57999999999999999999999988764 44589999999999855 666777778888999999999998888
Q ss_pred HHHHHHHhhcchhhccCcccCCcc-------ccccchHHHHHHhcCCHHHHHHHHHc-C-CC---CCCCccHHHHHHHcC
Q 010293 246 GEIKSLRVKSDEECEANIAEVDPM-------HAKRVRRIHKALDSDDVELLKLLLDE-S-NV---TLDDAYALHYAAAYC 313 (513)
Q Consensus 246 ~~i~~ll~~~~l~~ga~~~~~~~~-------d~~g~tpLh~A~~~g~~~~v~~Ll~~-g-~~---~~~g~tpLh~A~~~g 313 (513)
.++++++ +++|++++..+.. +..|.||||+|+..|+.+++++|++. | ++ +..|+||||+|+..+
T Consensus 118 ~~~~~~L----l~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 193 (285)
T 1wdy_A 118 VKALKFL----YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSS 193 (285)
T ss_dssp HHHHHHH----HHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCS
T ss_pred HHHHHHH----HHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcc
Confidence 6666776 7788998876433 67899999999999999999999998 7 44 578999999999999
Q ss_pred C----HHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCcccHHHH
Q 010293 314 N----PKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLS-KGACASETTSDGQTAVAICRRMTRRKDYIEA 388 (513)
Q Consensus 314 ~----~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l 388 (513)
+ .+++++|+++| +++|.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++|
T Consensus 194 ~~~~~~~i~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~L 272 (285)
T 1wdy_A 194 DDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELL 272 (285)
T ss_dssp CTTTHHHHHHHHHHTT-CCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ccchHHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHH
Confidence 9 89999999998 9999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred HhcCCCccccc
Q 010293 389 TKQGQETNKDR 399 (513)
Q Consensus 389 ~~~g~~~~~~~ 399 (513)
+++|+++...+
T Consensus 273 l~~Ga~~~~~d 283 (285)
T 1wdy_A 273 CKRGASTDCGD 283 (285)
T ss_dssp HHHSSCSCCSS
T ss_pred HHcCCCCCccc
Confidence 99999887544
No 11
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=2.5e-31 Score=255.20 Aligned_cols=215 Identities=15% Similarity=0.083 Sum_probs=166.2
Q ss_pred HHHHHHHHhcC-------------hHHHHHHHHHhccchhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCC
Q 010293 169 IELMYASAAFQ-------------MKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNL 231 (513)
Q Consensus 169 ~~lL~~A~~~~-------------~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~ 231 (513)
...|+.|...| ..++++++++.+.+.+... ...+.|+||+|+..+..+ |++.++++..++..
T Consensus 11 ~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 89 (253)
T 1yyh_A 11 FTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQT-DRTGETALHLAARYSRSDAAKRLLEASADANIQDNM 89 (253)
T ss_dssp -----------------------------------------CC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCccccc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Confidence 45677777755 8889999999998876531 345589999999999844 77777888888899
Q ss_pred CcchhhhccChhhHHHHHHHHhhcchhhcc-CcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHH
Q 010293 232 DDVCLEKELPDEVSGEIKSLRVKSDEECEA-NIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYAL 306 (513)
Q Consensus 232 ~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga-~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL 306 (513)
+.|+++.++..+. .++++++ +.+|+ +++.. +..|.||||+|+..|+.+++++|+++| ++ |..|+|||
T Consensus 90 g~t~L~~A~~~~~-~~~v~~L----l~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L 161 (253)
T 1yyh_A 90 GRTPLHAAVSADA-QGVFQIL----IRNRATDLDAR---MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL 161 (253)
T ss_dssp SCCHHHHHHHHTC-HHHHHHH----HHSTTSCTTCC---CTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred CCCHHHHHHHcCC-HHHHHHH----HHcCCCCcccc---CCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 9999999998888 5666666 56666 77777 899999999999999999999999999 55 47899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHH
Q 010293 307 HYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYI 386 (513)
Q Consensus 307 h~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~ 386 (513)
|+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|+||||+|++.|+.++++
T Consensus 162 ~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~ 240 (253)
T 1yyh_A 162 HWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVR 240 (253)
T ss_dssp HHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHH
Confidence 9999999999999999998 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCC
Q 010293 387 EATKQGQ 393 (513)
Q Consensus 387 ~l~~~g~ 393 (513)
+|.....
T Consensus 241 ~l~~~~~ 247 (253)
T 1yyh_A 241 LLDLEHH 247 (253)
T ss_dssp HHHC---
T ss_pred HHHHHhh
Confidence 9987654
No 12
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=1.8e-31 Score=259.31 Aligned_cols=114 Identities=25% Similarity=0.278 Sum_probs=59.6
Q ss_pred cccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC-CCcHHHHHHHcCCcccHHHHHhcCCCcccccchHHHHHH
Q 010293 329 LNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSD-GQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLER 407 (513)
Q Consensus 329 vn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~-g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~ 407 (513)
++.+|..|+||||+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+.+++++|++.|++++..+
T Consensus 151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d-------- 222 (282)
T 1oy3_D 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARM-------- 222 (282)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--------
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccc--------
Confidence 5556666666666666666666666666666666666543 6666666666666666666666666554332
Q ss_pred HHhcccCCCCcccchhhhccccchhhhhhhhhhhhhhhccccccchhhhhhcccCCccccccccc
Q 010293 408 EMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPSEARVAMHIADADATNFYTGLSAS 472 (513)
Q Consensus 408 ~~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~~a~~~~~~a~~~~~~~~~~l~~a 472 (513)
..|.++++.++. .++.+++++|+++||+++ ..+..+.|||..|
T Consensus 223 ------~~g~tpL~~A~~-----------~~~~~~v~~Ll~~ga~~~-----~~~~~g~tpl~~a 265 (282)
T 1oy3_D 223 ------YGGRTPLGSALL-----------RPNPILARLLRAHGAPEP-----EDGGDKLSPCSSS 265 (282)
T ss_dssp ------TTSCCHHHHHHT-----------SSCHHHHHHHHHTTCCCC-----CCC----------
T ss_pred ------cCCCCHHHHHHH-----------cCCcHHHHHHHHcCCCcC-----cCCCccccccccc
Confidence 223333333322 223556666666666665 5566677777666
No 13
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=6.2e-31 Score=255.60 Aligned_cols=190 Identities=19% Similarity=0.134 Sum_probs=168.7
Q ss_pred CCchhHHHHHHhcChHH----HHHHhhh---hhhccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCcccccc
Q 010293 201 EDVIPILVAAFHCQLNQ----LRSHCVQ---RVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKR 273 (513)
Q Consensus 201 ~n~~t~L~~A~~~~~~~----L~~~~~~---~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g 273 (513)
.++.|+||+|+..+..+ |++.+.+ +..++..+.||+|.|+..+. .+++++| +++|++++.+ |..|
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~-~~~v~~L----l~~ga~~~~~---~~~g 78 (282)
T 1oy3_D 7 EDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGE-ASTVEKL----YAAGAGVLVA---ERGG 78 (282)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTC-HHHHHHH----HHTTCCSSCC---CTTS
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCC-HHHHHHH----HHcCCCCCCC---CCCC
Confidence 45589999999999855 5555555 56678889999999998888 6677777 7789999988 8899
Q ss_pred chHHHHHHhcCCHHHHHHHHHcC-C--------------------------------------------------CCCCC
Q 010293 274 VRRIHKALDSDDVELLKLLLDES-N--------------------------------------------------VTLDD 302 (513)
Q Consensus 274 ~tpLh~A~~~g~~~~v~~Ll~~g-~--------------------------------------------------~~~~g 302 (513)
+||||+|+..|+.+++++|+++| . .+..|
T Consensus 79 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (282)
T 1oy3_D 79 HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG 158 (282)
T ss_dssp CCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred CCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence 99999999999999999999876 2 23579
Q ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC-CchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q 010293 303 AYALHYAAAYCNPKVFKEVLNMGLADLNLKNAR-GHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTR 381 (513)
Q Consensus 303 ~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~-g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~ 381 (513)
.||||+|+..|+.+++++|+++| ++++.++.. |+||||+|+..|+.++|++|+++|+|++.+|..|+||||+|+..|+
T Consensus 159 ~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~ 237 (282)
T 1oy3_D 159 HTPLHVAVIHKDAEMVRLLRDAG-ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPN 237 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSC
T ss_pred cCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCC
Confidence 99999999999999999999998 999999864 9999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHhcCCCccccc
Q 010293 382 RKDYIEATKQGQETNKDR 399 (513)
Q Consensus 382 ~~~v~~l~~~g~~~~~~~ 399 (513)
.+++++|+++|+++...+
T Consensus 238 ~~~v~~Ll~~ga~~~~~~ 255 (282)
T 1oy3_D 238 PILARLLRAHGAPEPEDG 255 (282)
T ss_dssp HHHHHHHHHTTCCCCCCC
T ss_pred cHHHHHHHHcCCCcCcCC
Confidence 999999999999887655
No 14
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=4.1e-31 Score=256.16 Aligned_cols=164 Identities=19% Similarity=0.100 Sum_probs=130.6
Q ss_pred ccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCc
Q 010293 228 RSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDA 303 (513)
Q Consensus 228 ~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~ 303 (513)
.+..+.++++.+...+....+++++ +.+|+++|.+ |.+|+||||+|+..|+.++|++|++.| ++ +..|.
T Consensus 48 ~~~~~~t~L~~a~~~~~~~~~v~~L----l~~Gadvn~~---d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~ 120 (269)
T 4b93_B 48 ADPEFCHPLCQCPKCAPAQKRLAKV----PASGLGVNVT---SQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQA 120 (269)
T ss_dssp -------------------------------CCCCTTCC---CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCC
T ss_pred cCccCCCHHHHHHHhCCHHHHHHHH----HHCCCCCCCc---CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCC
Confidence 3456678888777666656666666 7889999988 899999999999999999999999999 54 47899
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcc
Q 010293 304 YALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRK 383 (513)
Q Consensus 304 tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~ 383 (513)
||+|+|+..++.++++.|++.| +++|.+|..|+||||+|+..|+.++|++|+++|+|+|.++..|+||||+|+..|+.+
T Consensus 121 t~l~~a~~~~~~~~~~~Ll~~g-~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~ 199 (269)
T 4b93_B 121 VPLHLACQQGHFQVVKCLLDSN-AKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVF 199 (269)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred CccccccccChHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHH
Confidence 9999999999999999999998 999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHhcCCCccccc
Q 010293 384 DYIEATKQGQETNKDR 399 (513)
Q Consensus 384 ~v~~l~~~g~~~~~~~ 399 (513)
+|++|++.|++++..+
T Consensus 200 ~v~~Ll~~Gad~~~~d 215 (269)
T 4b93_B 200 VVELLLLHGASVQVLN 215 (269)
T ss_dssp HHHHHHHTTCCSCCCC
T ss_pred HHHHHHHCCCCCCCcC
Confidence 9999999999886554
No 15
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=3.6e-31 Score=254.09 Aligned_cols=190 Identities=16% Similarity=0.137 Sum_probs=151.5
Q ss_pred CCchhHHHHHHhcC-------------h----HHHHHHhhhhhh-ccCCCcchhhhccChhhHHHHHHHHhhcchhhccC
Q 010293 201 EDVIPILVAAFHCQ-------------L----NQLRSHCVQRVV-RSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEAN 262 (513)
Q Consensus 201 ~n~~t~L~~A~~~~-------------~----~~L~~~~~~~~~-~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~ 262 (513)
.++.|+||+|+..| . ..|++.+.+... .+..+.|+++.|+..+. .+++++| +++|++
T Consensus 8 ~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~-~~~v~~L----l~~g~~ 82 (253)
T 1yyh_A 8 PDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSR-SDAAKRL----LEASAD 82 (253)
T ss_dssp --------------------------------------------CCCTTSCCHHHHHHHTTC-HHHHHHH----HHTTCC
T ss_pred CCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCC-HHHHHHH----HHcCCC
Confidence 45589999999876 3 347777777754 47889999999999888 6667777 778999
Q ss_pred cccCCccccccchHHHHHHhcCCHHHHHHHHHcC--CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCc
Q 010293 263 IAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES--NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGH 337 (513)
Q Consensus 263 ~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g--~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~ 337 (513)
++.. |..|+||||+|+..|+.+++++|+++| ++ +..|.||||+|+..|+.+++++|++.| +++|.+|..|+
T Consensus 83 ~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~ 158 (253)
T 1yyh_A 83 ANIQ---DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGK 158 (253)
T ss_dssp TTCC---CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTT-CCTTCBCTTSC
T ss_pred CCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcC-CCCCCcCCCCC
Confidence 9988 899999999999999999999999998 33 478999999999999999999999998 99999999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCccccc
Q 010293 338 TVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDR 399 (513)
Q Consensus 338 tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~ 399 (513)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+++...+
T Consensus 159 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d 220 (253)
T 1yyh_A 159 SALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITD 220 (253)
T ss_dssp BHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999876544
No 16
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=6e-32 Score=261.99 Aligned_cols=204 Identities=22% Similarity=0.204 Sum_probs=162.6
Q ss_pred HHHHHHHHhcChHHHHHHHHHhccchhhh------cccCCchhHHHHHHhcCh-----HHHHHHhhhhhhccCCCcchhh
Q 010293 169 IELMYASAAFQMKELVLLFQRRLLNFVEK------ALVEDVIPILVAAFHCQL-----NQLRSHCVQRVVRSNLDDVCLE 237 (513)
Q Consensus 169 ~~lL~~A~~~~~~~L~~~~~~~l~~~~~k------~~~~n~~t~L~~A~~~~~-----~~L~~~~~~~~~~~~~~~t~l~ 237 (513)
.+.|+.|+..|..++++++++.+...... .....+.++|+.|+..+. ..|++.+++++.++..|.||++
T Consensus 12 ~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh 91 (269)
T 4b93_B 12 VEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLH 91 (269)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHHH
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 46788888999999999999887653211 012345789999987664 3478888999999999999999
Q ss_pred hccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcC
Q 010293 238 KELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYC 313 (513)
Q Consensus 238 ~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g 313 (513)
.|+..+. .+++++| +.+|++++.. +..|.||||+|+..++.+++++|++.| ++ |..|+||||+|+..|
T Consensus 92 ~A~~~g~-~~~v~~L----l~~~a~~~~~---~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 92 VAALHGR-ADLIPLL----LKHGANAGAR---NADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGG 163 (269)
T ss_dssp HHHHTTC-TTHHHHH----HHTTCCTTCC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTT
T ss_pred HHHHcCc-HHHHHHH----HhcCCCcCcc---CCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Confidence 9998888 6677777 7889999988 899999999999999999999999999 55 478999999999999
Q ss_pred CHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q 010293 314 NPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTR 381 (513)
Q Consensus 314 ~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~ 381 (513)
+.+++++|+++| +|+|.+|..|+||||+|+..|+.++|++|+++|||++.+|.+|+||||+|+++++
T Consensus 164 ~~~~v~~Ll~~g-advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 164 HHELVALLLQHG-ASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp CGGGHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred CHHHHHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 999999999998 9999999999999999999999999999999999999999999999999988765
No 17
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=6e-31 Score=248.34 Aligned_cols=213 Identities=18% Similarity=0.089 Sum_probs=185.8
Q ss_pred HHHHHHhcChHHHHHHHHHhccch-hhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhhH
Q 010293 171 LMYASAAFQMKELVLLFQRRLLNF-VEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEVS 245 (513)
Q Consensus 171 lL~~A~~~~~~~L~~~~~~~l~~~-~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~~ 245 (513)
.|+.|...|..+.++.+++..... ..+ ..++.|+||+|+..+..+ |++.+.++..++..+.|+++.++..+.
T Consensus 9 ~l~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~- 85 (231)
T 3aji_A 9 MICNLAYSGKLDELKERILADKSLATRT--DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGX- 85 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHHCGGGGGCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC-
T ss_pred hHHHHHHhCCHHHHHHHHHhchhhhhcC--CCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCH-
Confidence 577777777777777666655443 333 345589999999999755 666677777888899999999998888
Q ss_pred HHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHH
Q 010293 246 GEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEV 321 (513)
Q Consensus 246 ~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~L 321 (513)
.++++++ +++|++++.+ |..|.||||+|+..|+.+++++|+++| ++ +..|.||||+|+..|+.+++++|
T Consensus 86 ~~~v~~L----l~~g~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 158 (231)
T 3aji_A 86 DEIVKAL----LVKGAHVNAV---NQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHIL 158 (231)
T ss_dssp HHHHHHH----HHTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHH----HHcCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 5677777 7789999988 899999999999999999999999999 54 47799999999999999999999
Q ss_pred HHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCC
Q 010293 322 LNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQE 394 (513)
Q Consensus 322 l~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~ 394 (513)
++.+ ++++.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+..++.+++++|.+.|++
T Consensus 159 l~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 159 LFYK-ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp HHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred HhcC-CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 9998 99999999999999999999999999999999999999999999999999999999999999988764
No 18
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=1.4e-30 Score=246.86 Aligned_cols=210 Identities=18% Similarity=0.144 Sum_probs=139.6
Q ss_pred hhhccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CC
Q 010293 225 RVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TL 300 (513)
Q Consensus 225 ~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~ 300 (513)
+..++..+.|+++.|+..+. .++++++ +++|++++.. +..|.||||+|+..|+.+++++|+++| ++ +.
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~-~~~v~~L----l~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 75 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGH-VDICHML----VQAGANIDTC---SEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDA 75 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTC-HHHHHHH----HHTTCCTTCC---CTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCT
T ss_pred cccccCCCCCHHHHHHHcCc-HHHHHHH----HHcCCCcCcc---CCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCC
Confidence 34455566666666666665 3444444 5556776666 667777777777777777777777777 33 35
Q ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q 010293 301 DDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMT 380 (513)
Q Consensus 301 ~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~ 380 (513)
.|.||||+|+..|+.+++++|++.+.++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 76 ~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 76 EGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSG 155 (237)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCC
Confidence 67777777777777777777777665677777777777777777777777777777777777777777777777777777
Q ss_pred CcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccchhhhhhhhhhhhhhhccccccchhhhhhcc
Q 010293 381 RRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPSEARVAMHIADA 460 (513)
Q Consensus 381 ~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~~a~~~~~~a~~ 460 (513)
+.+++++|++.|.+++..+ ..|.++++.++. .++.+++++|+++|++++ .
T Consensus 156 ~~~~~~~Ll~~g~~~~~~~--------------~~g~t~L~~A~~-----------~~~~~~v~~Ll~~gad~~-----~ 205 (237)
T 3b7b_A 156 CVDIAEILLAAKCDLHAVN--------------IHGDSPLHIAAR-----------ENRYDCVVLFLSRDSDVT-----L 205 (237)
T ss_dssp CHHHHHHHHTTTCCTTCCC--------------TTCCCHHHHHHH-----------TTCHHHHHHHHTTTCCTT-----C
T ss_pred CHHHHHHHHHcCCCCCCcC--------------CCCCCHHHHHHH-----------hCCHhHHHHHHHcCCCCC-----c
Confidence 7777777777776554332 223333333322 234667777777777766 5
Q ss_pred cCCccccccccc
Q 010293 461 DATNFYTGLSAS 472 (513)
Q Consensus 461 ~~~~~~~~l~~a 472 (513)
.+..|.|||+.|
T Consensus 206 ~d~~g~t~l~~A 217 (237)
T 3b7b_A 206 KNKEGETPLQCA 217 (237)
T ss_dssp CCTTSCCHHHHS
T ss_pred cCCCCCCHHHHH
Confidence 566777777777
No 19
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=2.3e-30 Score=245.70 Aligned_cols=217 Identities=17% Similarity=0.119 Sum_probs=177.5
Q ss_pred CCchhHHHHHHhcChHHHHHH--------hhhhhhccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccc
Q 010293 201 EDVIPILVAAFHCQLNQLRSH--------CVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAK 272 (513)
Q Consensus 201 ~n~~t~L~~A~~~~~~~L~~~--------~~~~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~ 272 (513)
.++.|+||+|+..+..++++. +.++..++..+.|+++.++..+. .+++++| +++|++++.. |..
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~L----l~~g~~~~~~---~~~ 78 (241)
T 1k1a_A 7 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTL-PSVVRLL----VTAGASPMAL---DRH 78 (241)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC-HHHHHHH----HHTTCCTTCC---CTT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCC-HHHHHHH----HHcCCCcccc---CCC
Confidence 455899999999998654443 44556677889999999998888 5677776 6789999988 889
Q ss_pred cchHHHHHHhcCCHHHHHHHHHcC-----CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCchHHHHH
Q 010293 273 RVRRIHKALDSDDVELLKLLLDES-----NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKN-ARGHTVLHVA 343 (513)
Q Consensus 273 g~tpLh~A~~~g~~~~v~~Ll~~g-----~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d-~~g~tpLh~A 343 (513)
|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++++|++.| ++++.++ ..|+||||+|
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~g~t~L~~A 157 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG-ADIDAVDIKSGRSPLIHA 157 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTTCCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcC-CCcccccccCCCcHHHHH
Confidence 999999999999999999999987 22 467999999999999999999999998 9999998 7899999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchh
Q 010293 344 ARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSE 423 (513)
Q Consensus 344 ~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~ 423 (513)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++..+ ..|.+++..+
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~--------------~~g~tpl~~A 223 (241)
T 1k1a_A 158 VENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN--------------CHNDTPLMVA 223 (241)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCC--------------TTSCCTTTTC
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcC--------------CCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999876544 2333343333
Q ss_pred hhccccchhhhhhhhhhhhhhhcccccc
Q 010293 424 VMADDFQMKLNYLENRVAFARLLFPSEA 451 (513)
Q Consensus 424 ~~~~~~~~~~l~l~~~~~~~~~l~~~~a 451 (513)
.. .++.++++.|.++++
T Consensus 224 ~~-----------~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 224 RS-----------RRVIDILRGKATRPA 240 (241)
T ss_dssp SS-----------HHHHHHHTC------
T ss_pred Hh-----------cCcHHHHhhhccCCC
Confidence 22 356788888887665
No 20
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=1.7e-30 Score=262.83 Aligned_cols=226 Identities=12% Similarity=0.028 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHhccchhhhcccCCchhHHHHHHhcChHHHHHHhhhhhh--ccCCCcchhhhccChh
Q 010293 166 NYAIELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQLRSHCVQRVV--RSNLDDVCLEKELPDE 243 (513)
Q Consensus 166 ~~~~~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~L~~~~~~~~~--~~~~~~t~l~~a~~~~ 243 (513)
......|+.|+..+..++++++++.+.+++.++ ..+.|+||+|+..++.++++..++... ....+.|+++.++..+
T Consensus 18 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d--~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g 95 (364)
T 3ljn_A 18 DENMEKIHVAARKGQTDEVRRLIETGVSPTIQN--RFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMAN 95 (364)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC--TTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC--CCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcC
Confidence 445789999999999999999999999988874 445899999999998665554444332 2347899999999988
Q ss_pred hHHHHHHHHhhcchhhccCccc--------------CCccccccchHHHHHHhcC--CHHHHHHHHHcC-CC---CCCCc
Q 010293 244 VSGEIKSLRVKSDEECEANIAE--------------VDPMHAKRVRRIHKALDSD--DVELLKLLLDES-NV---TLDDA 303 (513)
Q Consensus 244 ~~~~i~~ll~~~~l~~ga~~~~--------------~~~~d~~g~tpLh~A~~~g--~~~~v~~Ll~~g-~~---~~~g~ 303 (513)
. .+++++|.......|++++. .+..|..|.||||+|+..| +.++|++|+++| ++ |..|+
T Consensus 96 ~-~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~ 174 (364)
T 3ljn_A 96 K-TDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADE 174 (364)
T ss_dssp C-HHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSC
T ss_pred C-HHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCC
Confidence 8 66666662222222777766 0112889999999999999 999999999999 55 47899
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCC-----cccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 010293 304 YALHYAAAYCNPKVFKEVLNMGLAD-----LNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRR 378 (513)
Q Consensus 304 tpLh~A~~~g~~~~v~~Ll~~~~ad-----vn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~ 378 (513)
||||+|+..|+.+++++|++.+ ++ +|.+|..|+||||+|+..|+.++|++|+++|+|++.+|..|+||||+|+.
T Consensus 175 t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~ 253 (364)
T 3ljn_A 175 TPLMRAMEFRNREALDLMMDTV-PSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVR 253 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHC-SCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcc-cccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 9999999999999999999998 88 99999999999999999999999999999999999999999999999999
Q ss_pred cCCcccHHHHHhcCCCc
Q 010293 379 MTRRKDYIEATKQGQET 395 (513)
Q Consensus 379 ~~~~~~v~~l~~~g~~~ 395 (513)
.|+.+++++|++.|.++
T Consensus 254 ~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 254 AAMVLLTKELLQKTDVF 270 (364)
T ss_dssp TCCHHHHHHHHHHSCHH
T ss_pred hChHHHHHHHHHcCCch
Confidence 99999999999998854
No 21
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=5.7e-31 Score=266.37 Aligned_cols=236 Identities=12% Similarity=0.104 Sum_probs=196.9
Q ss_pred CCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchH
Q 010293 201 EDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRR 276 (513)
Q Consensus 201 ~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tp 276 (513)
.++.|+||+|+..+..+ |++.+++++.++..+.|+++.|+..++ .+++++| +++|++++ +.+|.||
T Consensus 18 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~-~~~v~~L----l~~g~~~~-----~~~g~t~ 87 (364)
T 3ljn_A 18 DENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGC-VDTAKYL----ASVGEVHS-----LWHGQKP 87 (364)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCC-HHHHHHH----HHHCCCCC-----CBTTBCH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCC-HHHHHHH----HHCCCCcc-----ccCCCCH
Confidence 34489999999999844 677777888889999999999999998 6777777 77788665 4589999
Q ss_pred HHHHHhcCCHHHHHHHHHc----C-C--------------------CCCCCccHHHHHHHcC--CHHHHHHHHHcCCCCc
Q 010293 277 IHKALDSDDVELLKLLLDE----S-N--------------------VTLDDAYALHYAAAYC--NPKVFKEVLNMGLADL 329 (513)
Q Consensus 277 Lh~A~~~g~~~~v~~Ll~~----g-~--------------------~~~~g~tpLh~A~~~g--~~~~v~~Ll~~~~adv 329 (513)
||+|+..|+.++|++|++. | + .+..|.||||+|+..| +.+++++|++.| +++
T Consensus 88 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g-a~~ 166 (364)
T 3ljn_A 88 IHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG-ASP 166 (364)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT-CCT
T ss_pred HHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC-CCC
Confidence 9999999999999999998 5 2 3457999999999999 999999999998 999
Q ss_pred ccCCCCCchHHHHHHHcCCHHHHHHHHhCCCC-----CCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcccccchHHH
Q 010293 330 NLKNARGHTVLHVAARRKEPAVLVTLLSKGAC-----ASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDV 404 (513)
Q Consensus 330 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad-----~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~ 404 (513)
+.+|..|+||||+|+..|+.++|++|+++|++ ++.+|..|+||||+|+..|+.+++++|++.|++++..+
T Consensus 167 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d----- 241 (364)
T 3ljn_A 167 TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMED----- 241 (364)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCC-----
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC-----
Confidence 99999999999999999999999999999999 99999999999999999999999999999999876544
Q ss_pred HHHHHhcccCCCCcccchhhhccccchhhhhhhhhhhhhhhccccccchhhhhh-------cccCCccccccccc
Q 010293 405 LEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPSEARVAMHIA-------DADATNFYTGLSAS 472 (513)
Q Consensus 405 l~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~~a~~~~~~a-------~~~~~~~~~~l~~a 472 (513)
..|.+++..+... ++.+++++|+++|+++..... ......++|+|+.|
T Consensus 242 ---------~~g~tpL~~A~~~-----------g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 296 (364)
T 3ljn_A 242 ---------NEHTVPLYLSVRA-----------AMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPA 296 (364)
T ss_dssp ---------TTSCCHHHHHHHT-----------CCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCS
T ss_pred ---------CCCCCHHHHHHHh-----------ChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhh
Confidence 3444555444433 457888888888877643221 11234467777766
No 22
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=250.71 Aligned_cols=212 Identities=17% Similarity=0.067 Sum_probs=188.5
Q ss_pred HHHHHHHhcChHHHHHHHHHhccchhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhhH
Q 010293 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEVS 245 (513)
Q Consensus 170 ~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~~ 245 (513)
..|+.|+..+..++++++++.+.+++.++ .++.|+||+|+..+..+ |++.+++++.++..+.||++.++..+.
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~- 81 (261)
T 2xai_A 5 SPMHEAAIHGHQLSLRNLISQGWAVNIIT--ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS- 81 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSCCC--TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC-
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCcC--CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC-
Confidence 47899999999999999999999988764 44589999999999744 777788888889999999999999888
Q ss_pred HHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHH
Q 010293 246 GEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEV 321 (513)
Q Consensus 246 ~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~L 321 (513)
.++++++ +++|++++. +.+|.||||+|+..|+.+++++|+++| ++ |..|.||||+|+..|+.+++++|
T Consensus 82 ~~~v~~L----l~~g~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 153 (261)
T 2xai_A 82 WDCVNLL----LQHGASVQP----ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKL 153 (261)
T ss_dssp HHHHHHH----HHTTCCSSC----SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHH----HHCCCCCCC----CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHH
Confidence 6677777 788999875 356999999999999999999999999 55 47899999999999999999999
Q ss_pred HHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcc
Q 010293 322 LNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 396 (513)
Q Consensus 322 l~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 396 (513)
++.| +++|. +..|+||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+.. ..++++|++.+..+.
T Consensus 154 l~~g-~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~--~~~~~~ll~~~~~~~ 224 (261)
T 2xai_A 154 LESG-ADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE--SPLAQLFLEREGPPS 224 (261)
T ss_dssp HHHT-CCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT--CTHHHHHHHC-CCCC
T ss_pred HHcC-CCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc--ccHHHHHHhccCCcc
Confidence 9998 99995 88999999999999999999999999999999999999999999954 568899999876554
No 23
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=7.9e-31 Score=248.90 Aligned_cols=213 Identities=14% Similarity=0.080 Sum_probs=183.6
Q ss_pred HHHHHHHhcChHHHHHHHHH----hccchhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccC
Q 010293 170 ELMYASAAFQMKELVLLFQR----RLLNFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELP 241 (513)
Q Consensus 170 ~lL~~A~~~~~~~L~~~~~~----~l~~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~ 241 (513)
.+|+.|...+..++++++++ .+.+++.++ ..+.|+||+|+..+..+ |++.++++...+..+.|+++.++.
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 88 (241)
T 1k1a_A 11 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYN--NLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACE 88 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCC--TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHhcCCCCCccc--ccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 57999999999988888876 566766653 44589999999999855 667777777888899999999998
Q ss_pred hhhHHHHHHHHhhcchhhcc----CcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CCC----CCCccHHHHHHHc
Q 010293 242 DEVSGEIKSLRVKSDEECEA----NIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NVT----LDDAYALHYAAAY 312 (513)
Q Consensus 242 ~~~~~~i~~ll~~~~l~~ga----~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~~----~~g~tpLh~A~~~ 312 (513)
.+. .++++++ +++|+ +++.. |..|.||||+|+..|+.+++++|+++| +++ ..|.||||+|+..
T Consensus 89 ~~~-~~~~~~L----l~~~~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 160 (241)
T 1k1a_A 89 HRS-PTCLRAL----LDSAAPGTLDLEAR---NYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVEN 160 (241)
T ss_dssp TTC-HHHHHHH----HHHSCTTSCCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHT
T ss_pred cCC-HHHHHHH----HHcCCCcccccccc---CcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHc
Confidence 888 5566666 55565 67766 899999999999999999999999999 554 5799999999999
Q ss_pred CCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcC
Q 010293 313 CNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQG 392 (513)
Q Consensus 313 g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g 392 (513)
|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+..|+.++++.|.+.+
T Consensus 161 ~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 161 NSLSMVQLLLQHG-ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRP 239 (241)
T ss_dssp TCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred CCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence 9999999999998 999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred C
Q 010293 393 Q 393 (513)
Q Consensus 393 ~ 393 (513)
+
T Consensus 240 a 240 (241)
T 1k1a_A 240 A 240 (241)
T ss_dssp -
T ss_pred C
Confidence 4
No 24
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=7.5e-31 Score=266.61 Aligned_cols=215 Identities=15% Similarity=0.123 Sum_probs=188.6
Q ss_pred HHHHHHHhcChHHHHHH--------HHHhccchhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhh
Q 010293 170 ELMYASAAFQMKELVLL--------FQRRLLNFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLE 237 (513)
Q Consensus 170 ~lL~~A~~~~~~~L~~~--------~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~ 237 (513)
..|+.|+..+..+++++ +++.+++++.++ ..+.|+||+|+..+..+ |++.++++..++..+.|+++
T Consensus 127 t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d--~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~ 204 (373)
T 2fo1_E 127 TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMD--CDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALH 204 (373)
T ss_dssp CHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCC--TTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCC--CCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHH
Confidence 57888888876654444 447889888874 44589999999999854 67777888888899999999
Q ss_pred hccChhhHHHHHHHHhhcchhhc---cCcccCCccccccchHHHHHHhcC---CHHHHHHHHHcC-CCC-----------
Q 010293 238 KELPDEVSGEIKSLRVKSDEECE---ANIAEVDPMHAKRVRRIHKALDSD---DVELLKLLLDES-NVT----------- 299 (513)
Q Consensus 238 ~a~~~~~~~~i~~ll~~~~l~~g---a~~~~~~~~d~~g~tpLh~A~~~g---~~~~v~~Ll~~g-~~~----------- 299 (513)
.++..+. .+++++| +.+| ++++.. |..|.||||+|+..| +.+++++|+++| +++
T Consensus 205 ~A~~~g~-~~~v~~L----l~~~~~~~~~~~~---d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d 276 (373)
T 2fo1_E 205 QAAANRD-FGMMVYM----LNSTKLKGDIEEL---DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEK 276 (373)
T ss_dssp HHHHTTC-HHHHHHH----TTSHHHHHTTSCC---CTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSS
T ss_pred HHHHCCC-HHHHHHH----HhcCccccChhhc---CCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCccc
Confidence 9999888 5666666 5555 788887 999999999999998 899999999999 554
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q 010293 300 LDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRM 379 (513)
Q Consensus 300 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 379 (513)
..|+||||+|+..|+.+++++|++++++++|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.+
T Consensus 277 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~ 356 (373)
T 2fo1_E 277 YKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQAN 356 (373)
T ss_dssp CCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHT
T ss_pred ccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHc
Confidence 37999999999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred CCcccHHHHHhcCCC
Q 010293 380 TRRKDYIEATKQGQE 394 (513)
Q Consensus 380 ~~~~~v~~l~~~g~~ 394 (513)
|+.+++++|+++|++
T Consensus 357 g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 357 NHHNIVDIFDRCRPE 371 (373)
T ss_dssp TCHHHHHHHHTTC--
T ss_pred CCHHHHHHHHhcCcc
Confidence 999999999999864
No 25
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=5.1e-30 Score=241.99 Aligned_cols=215 Identities=17% Similarity=0.124 Sum_probs=182.2
Q ss_pred hhHHHHHHhcChHHHHHHhh-----hhhhccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHH
Q 010293 204 IPILVAAFHCQLNQLRSHCV-----QRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIH 278 (513)
Q Consensus 204 ~t~L~~A~~~~~~~L~~~~~-----~~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh 278 (513)
.++|+.|+..|..+.++..+ .....+..+.|+++.|+..+. .++++++ +++|++++.. |..|+||||
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~-~~~v~~L----l~~g~~~~~~---~~~g~t~L~ 78 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGH-TEIVEFL----LQLGVPVNDK---DDAGWSPLH 78 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTC-HHHHHHH----HHTTCCSCCC---CTTSCCHHH
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCc-HHHHHHH----HHhCCCCCCc---CCCCCCHHH
Confidence 68999999999855444332 234567889999999999888 6666766 6789999988 899999999
Q ss_pred HHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHH
Q 010293 279 KALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVT 354 (513)
Q Consensus 279 ~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~ 354 (513)
+|+..|+.+++++|+++| ++ +..|.||||+|+..|+.+++++|++++ ++++.+|..|+||||+|+..|+.+++++
T Consensus 79 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 157 (231)
T 3aji_A 79 IAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAKDHYDATAMHRAAAKGNLKMVHI 157 (231)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 999999999999999999 54 578999999999999999999999998 9999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccchhhh
Q 010293 355 LLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLN 434 (513)
Q Consensus 355 Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~l 434 (513)
|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++..+ ..|.+++..+. .
T Consensus 158 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~--------------~~g~t~l~~A~--~------- 214 (231)
T 3aji_A 158 LLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIEN--------------KEEKTPLQVAK--G------- 214 (231)
T ss_dssp HHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC--------------TTSCCHHHHSC--H-------
T ss_pred HHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC--------------CCCCCHHHHHH--h-------
Confidence 999999999999999999999999999999999999999876544 23333333332 1
Q ss_pred hhhhhhhhhhhccccccc
Q 010293 435 YLENRVAFARLLFPSEAR 452 (513)
Q Consensus 435 ~l~~~~~~~~~l~~~~a~ 452 (513)
.++.+++++|.++|++
T Consensus 215 --~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 215 --GLGLILKRLAEGEEAS 230 (231)
T ss_dssp --HHHHHHHHHHHHHHHC
T ss_pred --hHHHHHHHHHcccccc
Confidence 2356777777777664
No 26
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=4.6e-30 Score=243.26 Aligned_cols=209 Identities=18% Similarity=0.168 Sum_probs=174.2
Q ss_pred HHHHHHHhcChHHHHHHHHHhccchhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhhH
Q 010293 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEVS 245 (513)
Q Consensus 170 ~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~~ 245 (513)
.+|+.|...+..++++++++.+.+++..+ ..+.++|++|+..+..+ |++.+.++..++..+.|+++.++..+.
T Consensus 13 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~- 89 (237)
T 3b7b_A 13 SPLHAAAEAGHVDICHMLVQAGANIDTCS--EDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGH- 89 (237)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCC--TTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTC-
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCCcCccC--CCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-
Confidence 57889999999999999999998887764 34579999999998755 455555666677888899998888887
Q ss_pred HHHHHHHhhcchhhc-cCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHH
Q 010293 246 GEIKSLRVKSDEECE-ANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKE 320 (513)
Q Consensus 246 ~~i~~ll~~~~l~~g-a~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~ 320 (513)
.++++++ +++| ++++.. +..|.||||+|+..|+.+++++|+++| ++ +..|.||||+|+..|+.+++++
T Consensus 90 ~~~~~~L----l~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 162 (237)
T 3b7b_A 90 YEVVQYL----LSNGQMDVNCQ---DDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEI 162 (237)
T ss_dssp HHHHHHH----HTTTCCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHH
T ss_pred HHHHHHH----HhCCCCCcccC---CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHH
Confidence 5566666 5666 677777 888999999999999999999999998 54 4678999999999999999999
Q ss_pred HHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHH
Q 010293 321 VLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEAT 389 (513)
Q Consensus 321 Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~ 389 (513)
|++.| ++++.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+.+|+...+..+.
T Consensus 163 Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~ 230 (237)
T 3b7b_A 163 LLAAK-CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMS 230 (237)
T ss_dssp HHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred HHHcC-CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99887 999999999999999999999999999999999999999999999999999988765554444
No 27
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=1.4e-30 Score=254.67 Aligned_cols=230 Identities=10% Similarity=0.029 Sum_probs=193.1
Q ss_pred hcChHHHHHHHHHhccchhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhhHHHHHHHH
Q 010293 177 AFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLR 252 (513)
Q Consensus 177 ~~~~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~ll 252 (513)
.++..++.+++.+.. ++.+ ..++.|+||+|+..+..+ |++.+++++.+ .|.||++.|+..+. .+++++|
T Consensus 9 ~~~~~~v~~lL~~~~--~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~-~~~v~~L 81 (285)
T 3kea_A 9 TWKSKQLKSFLSSKD--TFKA--DVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLED-TKIVKIL 81 (285)
T ss_dssp GCCHHHHHHHHHSTT--TTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSS-CHHHHHH
T ss_pred hcCHHHHHHHHHhCC--CCcc--CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCC-HHHHHHH
Confidence 455677777777664 3344 345589999999999855 66667776655 48999999999888 6677777
Q ss_pred hhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCC-ccHHHHHHHcCCHHHHHHHHHcCCC
Q 010293 253 VKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDD-AYALHYAAAYCNPKVFKEVLNMGLA 327 (513)
Q Consensus 253 ~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g-~tpLh~A~~~g~~~~v~~Ll~~~~a 327 (513)
+++|++++.+ |..|+||||+|+..|+.+++++|+++| ++ +..| .||||+|+..|+.+++++|++++ +
T Consensus 82 ----l~~ga~~~~~---d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g-~ 153 (285)
T 3kea_A 82 ----LFSGLDDSQF---DDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI-P 153 (285)
T ss_dssp ----HHTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTS-C
T ss_pred ----HHCCCCCCCc---CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCC-C
Confidence 7889999988 899999999999999999999999999 44 4677 79999999999999999999998 7
Q ss_pred CcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcH-HHHHHHcCCcccHHHHHhcCCCcccccchHHHHH
Q 010293 328 DLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTA-VAICRRMTRRKDYIEATKQGQETNKDRLCIDVLE 406 (513)
Q Consensus 328 dvn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tp-L~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~ 406 (513)
++... ..|+||||+|+..|+.+++++|+++|+|++.+|..|+|| ||+|+..|+.+++++|++.|++++..+
T Consensus 154 ~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~------- 225 (285)
T 3kea_A 154 STFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN------- 225 (285)
T ss_dssp TTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT-------
T ss_pred ccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC-------
Confidence 66322 289999999999999999999999999999999999998 999999999999999999999876554
Q ss_pred HHHhcccCCCCcccchhhhccccchhhhhhhhhhhhhhhccccccchh
Q 010293 407 REMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPSEARVA 454 (513)
Q Consensus 407 ~~~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~~a~~~ 454 (513)
.. + ...++.+++++|+++|+++.
T Consensus 226 --~~------------a-----------~~~~~~~iv~~Ll~~g~~~~ 248 (285)
T 3kea_A 226 --LE------------N-----------VLLDDAEIAKMIIEKHVEYK 248 (285)
T ss_dssp --GG------------G-----------GTTTCHHHHHHHHHHHHHHT
T ss_pred --hh------------h-----------hhcCCHHHHHHHHHcCCCCC
Confidence 00 0 01347899999999998876
No 28
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=2.1e-30 Score=243.30 Aligned_cols=203 Identities=16% Similarity=0.086 Sum_probs=176.7
Q ss_pred HHHHHHHhccchhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhhHHHHHHHHhhcchh
Q 010293 183 LVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEE 258 (513)
Q Consensus 183 L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~ 258 (513)
+++++++.+.+++... ..++.|+||+|+..+..+ |++.+.++..++..+.|+++.++..+. .++++++ ++
T Consensus 6 ~i~~Ll~~g~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~L----l~ 79 (223)
T 2f8y_A 6 VISDFIYQGASLHNQT-DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADA-QGVFQIL----IR 79 (223)
T ss_dssp CEETTEETTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHH----HH
T ss_pred HHHHHHHcCCCccccc-CCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHH----HH
Confidence 3445556666665531 245589999999999854 667777777888899999999998888 5666666 55
Q ss_pred hcc-CcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Q 010293 259 CEA-NIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKN 333 (513)
Q Consensus 259 ~ga-~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d 333 (513)
+|+ +++.. +..|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|+++| ++++.+|
T Consensus 80 ~~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~ 155 (223)
T 2f8y_A 80 NRATDLDAR---MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQN 155 (223)
T ss_dssp BTTSCTTCC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCC
T ss_pred cCCCCcccC---CCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcC
Confidence 565 67776 899999999999999999999999999 54 477999999999999999999999997 9999999
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCc
Q 010293 334 ARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 395 (513)
Q Consensus 334 ~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~ 395 (513)
..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++.|...
T Consensus 156 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 156 NREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSS
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999753
No 29
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=4.6e-30 Score=257.20 Aligned_cols=230 Identities=22% Similarity=0.159 Sum_probs=197.2
Q ss_pred hhHHHHHHhcChHHHHHHh-----hhhhhccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHH
Q 010293 204 IPILVAAFHCQLNQLRSHC-----VQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIH 278 (513)
Q Consensus 204 ~t~L~~A~~~~~~~L~~~~-----~~~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh 278 (513)
.++|+.|+..|..+.++.. .++..++..+.|++|.|+..+. .+++++| +++|++++.+ |..|+||||
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~-~~~v~~L----l~~g~~~~~~---~~~g~t~L~ 96 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNR-VRIVQLL----LQHGADVHAK---DKGGLVPLH 96 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTC-HHHHHHH----HHTTCCTTCC---CTTCCCHHH
T ss_pred chhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCC-HHHHHHH----HHcCCCCCcc---CCCCCcHHH
Confidence 6899999999986654443 4455677889999999999988 6677777 7789999988 899999999
Q ss_pred HHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCC---------------------
Q 010293 279 KALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKN--------------------- 333 (513)
Q Consensus 279 ~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d--------------------- 333 (513)
+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|+++| ++++..+
T Consensus 97 ~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~~~l~~a~~~~~~~~~~~ 175 (351)
T 3utm_A 97 NACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHG-ADPTLVNCHGKSAVDMAPTPELRERLTY 175 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHCSSHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCccccCCCCcchHHHhhhhhHHHHHh
Confidence 999999999999999999 54 477999999999999999999999998 9987654
Q ss_pred ---------------------------------CCCchHHHHHHHc---CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 010293 334 ---------------------------------ARGHTVLHVAARR---KEPAVLVTLLSKGACASETTSDGQTAVAICR 377 (513)
Q Consensus 334 ---------------------------------~~g~tpLh~A~~~---g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 377 (513)
..|+||||+|+.. +..+++++|+++|++++.+|..|+||||+|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 255 (351)
T 3utm_A 176 EFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAA 255 (351)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred hhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHH
Confidence 4567999999999 5589999999999999999999999999999
Q ss_pred HcCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccchhhhhhhhhhhhhhhccccccchhhhh
Q 010293 378 RMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPSEARVAMHI 457 (513)
Q Consensus 378 ~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~~a~~~~~~ 457 (513)
..|+.+++++|++.|++++..+ ..|.++++.++. .++.+++++|+++|+++.
T Consensus 256 ~~g~~~~v~~Ll~~ga~~n~~d--------------~~g~t~L~~A~~-----------~~~~~~v~~Ll~~gad~~--- 307 (351)
T 3utm_A 256 ERAHNDVMEVLHKHGAKMNALD--------------SLGQTALHRAAL-----------AGHLQTCRLLLSYGSDPS--- 307 (351)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCC--------------TTSCCHHHHHHH-----------HTCHHHHHHHHHTTCCTT---
T ss_pred HcCCHHHHHHHHHCCCCCCCcC--------------CCCCCHHHHHHH-----------cCcHHHHHHHHHcCCCCC---
Confidence 9999999999999999876544 234455544443 346889999999999998
Q ss_pred hcccCCccccccccc
Q 010293 458 ADADATNFYTGLSAS 472 (513)
Q Consensus 458 a~~~~~~~~~~l~~a 472 (513)
..+..|.||++.|
T Consensus 308 --~~~~~g~tal~~a 320 (351)
T 3utm_A 308 --IISLQGFTAAQMG 320 (351)
T ss_dssp --CCCTTSCCHHHHS
T ss_pred --CcCCCCCChhhhh
Confidence 7778899999987
No 30
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=1e-30 Score=265.59 Aligned_cols=245 Identities=13% Similarity=0.101 Sum_probs=199.9
Q ss_pred HHHHHHHhcChHHHHHHHHHhccchhhhcccCCchhHHHHHHhcChH----HH--------HHHhhhhhhccCCCcchhh
Q 010293 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLN----QL--------RSHCVQRVVRSNLDDVCLE 237 (513)
Q Consensus 170 ~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~----~L--------~~~~~~~~~~~~~~~t~l~ 237 (513)
..|+.|+..+. ++++.+... +++.++ ...+.|+||+|+..+.. .| ++.+++++.++..+.|+++
T Consensus 96 t~L~~Aa~~~~-~~~~~L~~~--~~n~~d-~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~ 171 (373)
T 2fo1_E 96 IKLHTEAAGSY-AITEPITRE--SVNIID-PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLM 171 (373)
T ss_dssp CHHHHHHHSSS-CCCSCCSTT--TTTTCC-CSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHH
T ss_pred cHHHHHhcCCc-hHHHHhccc--cccccC-CcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHH
Confidence 46777777654 455544432 333332 24568999999999863 23 4778888899999999999
Q ss_pred hccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC----C---CCCCCccHHHHHH
Q 010293 238 KELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES----N---VTLDDAYALHYAA 310 (513)
Q Consensus 238 ~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g----~---~~~~g~tpLh~A~ 310 (513)
.|+..+. .+++++| +++|++++.. |..|.||||+|+..|+.+++++|+++| + .|..|.||||+|+
T Consensus 172 ~A~~~g~-~~iv~~L----l~~ga~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~ 243 (373)
T 2fo1_E 172 LAVLARR-RRLVAYL----MKAGADPTIY---NKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVA 243 (373)
T ss_dssp HHHHHTC-HHHHHHH----HHTTCCSCCC---CTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHH
T ss_pred HHHHcCh-HHHHHHH----HHCCCCCccc---CCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHH
Confidence 9999988 6777777 7889999988 899999999999999999999999986 3 3588999999999
Q ss_pred HcC---CHHHHHHHHHcCCCCccc--------CCCCCchHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHH
Q 010293 311 AYC---NPKVFKEVLNMGLADLNL--------KNARGHTVLHVAARRKEPAVLVTLLSKG-ACASETTSDGQTAVAICRR 378 (513)
Q Consensus 311 ~~g---~~~~v~~Ll~~~~advn~--------~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~ 378 (513)
..+ +.+++++|++.| ++++. +|..|+||||+|+..|+.++|++|+++| ++++.+|..|+||||+|+.
T Consensus 244 ~~~~~~~~~~v~~Ll~~g-~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~ 322 (373)
T 2fo1_E 244 HNEGRDQVASAKLLVEKG-AKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQ 322 (373)
T ss_dssp HSCSTTHHHHHHHHHHHT-CCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHH
T ss_pred HhCCcchHHHHHHHHHCC-CCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHH
Confidence 998 899999999998 99986 6779999999999999999999999876 9999999999999999999
Q ss_pred cCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccchhhhhhhhhhhhhhhccccccc
Q 010293 379 MTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPSEAR 452 (513)
Q Consensus 379 ~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~~a~ 452 (513)
.|+.+++++|++.|++++..+ ..|.+++..+.. .++.+++++|++++++
T Consensus 323 ~g~~~iv~~Ll~~gad~~~~d--------------~~g~t~l~~A~~-----------~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 323 EGRIEVVMYLIQQGASVEAVD--------------ATDHTARQLAQA-----------NNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HTCHHHHHHHHHTTCCSSCCC--------------SSSCCHHHHHHH-----------TTCHHHHHHHHTTC--
T ss_pred cCCHHHHHHHHHcCCCccCCC--------------CCCCCHHHHHHH-----------cCCHHHHHHHHhcCcc
Confidence 999999999999999876544 234444444433 3457888888887764
No 31
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=1.8e-29 Score=237.62 Aligned_cols=190 Identities=18% Similarity=0.080 Sum_probs=154.8
Q ss_pred hhHHHHHHhcChHH----HHHHhhhhhh-ccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHH
Q 010293 204 IPILVAAFHCQLNQ----LRSHCVQRVV-RSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIH 278 (513)
Q Consensus 204 ~t~L~~A~~~~~~~----L~~~~~~~~~-~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh 278 (513)
.|+||+|+..+..+ |++.+.+... ++..+.|+++.++..+. .++++++ +++|++++.....+..|+||||
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~L----l~~~~~~~~~~~~~~~g~t~L~ 77 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQA-HEITSFL----LSKMENVNLDDYPDDSGWTPFH 77 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTC-HHHHHHH----HHTCTTCCGGGCCCTTSCCHHH
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCC-HHHHHHH----HhccccccccccCCCCCCCHHH
Confidence 46788888877644 4444444443 56777888888877777 5566666 6667444443223889999999
Q ss_pred HHHhcCCHHHHHHHHHcC---CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHH
Q 010293 279 KALDSDDVELLKLLLDES---NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVL 352 (513)
Q Consensus 279 ~A~~~g~~~~v~~Ll~~g---~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v 352 (513)
+|+..|+.+++++|+++| ++ +..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++
T Consensus 78 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v 156 (228)
T 2dzn_A 78 IACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG-ASVRIKDKFNQIPLHRAASVGSLKLI 156 (228)
T ss_dssp HHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHH
Confidence 999999999999999987 22 467999999999999999999999987 99999999999999999999999999
Q ss_pred HHHHhCC-CCCCCCCCCCCcHHHHHHHcCCcccHHHHH-hcCCCccccc
Q 010293 353 VTLLSKG-ACASETTSDGQTAVAICRRMTRRKDYIEAT-KQGQETNKDR 399 (513)
Q Consensus 353 ~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~v~~l~-~~g~~~~~~~ 399 (513)
++|+++| ++++.+|..|+||||+|+..|+.+++++|+ +.|+++...+
T Consensus 157 ~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~ 205 (228)
T 2dzn_A 157 ELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVD 205 (228)
T ss_dssp HHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBC
T ss_pred HHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccC
Confidence 9999999 999999999999999999999999999999 8898776544
No 32
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=4.1e-29 Score=249.96 Aligned_cols=248 Identities=19% Similarity=0.169 Sum_probs=205.9
Q ss_pred HHHHHHHhcChHHHHHHHHHhccchhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhhH
Q 010293 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEVS 245 (513)
Q Consensus 170 ~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~~ 245 (513)
..|+.|+..+..++++++++++++++.++ ....++++.+...+... +...+.++...+..|.|+++.++..+.
T Consensus 61 TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~- 137 (337)
T 4g8k_A 61 TPLHNAVQMSREDIVELLLRHGADPVLRK--KNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK- 137 (337)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCC--TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTC-
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCchhhhc--cCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCc-
Confidence 47999999999999999999999988874 44578899988888744 566667778888999999999998888
Q ss_pred HHHHHHHhhcchhhccCcccCC-------ccccccchHHHHHHhcCCHHHHHHHHHc-C-CC---CCCCccHHHHHHHcC
Q 010293 246 GEIKSLRVKSDEECEANIAEVD-------PMHAKRVRRIHKALDSDDVELLKLLLDE-S-NV---TLDDAYALHYAAAYC 313 (513)
Q Consensus 246 ~~i~~ll~~~~l~~ga~~~~~~-------~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-g-~~---~~~g~tpLh~A~~~g 313 (513)
.++++++ +.+|++++..+ ..+..|.||||+|+..|+.++|++||++ | ++ |..|.||||.++..+
T Consensus 138 ~~~~~~l----l~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~ 213 (337)
T 4g8k_A 138 VKALKFL----YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSS 213 (337)
T ss_dssp HHHHHHH----HHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHS
T ss_pred HHHHHHH----HHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHc
Confidence 5566666 67788887642 2356799999999999999999999964 6 55 478999999887655
Q ss_pred C----HHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCcccHHHH
Q 010293 314 N----PKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSK-GACASETTSDGQTAVAICRRMTRRKDYIEA 388 (513)
Q Consensus 314 ~----~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~~~~~~v~~l 388 (513)
. ..++++|+++| +++|.+|..|+||||+|+..|+.+++++|++. |+++|.+|.+|+||||+|++.|+.++|++|
T Consensus 214 ~~~~~~~i~~lLl~~g-ad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~L 292 (337)
T 4g8k_A 214 DDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELL 292 (337)
T ss_dssp CTTTHHHHHHHHHHTT-CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred CcccHHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3 45788888887 99999999999999999999999999999985 899999999999999999999999999999
Q ss_pred HhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccchhhhhhhhhhhhhhhccccccchhh
Q 010293 389 TKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPSEARVAM 455 (513)
Q Consensus 389 ~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~~a~~~~ 455 (513)
+++|++++... + +..+.. .++.+++++|+++||+++.
T Consensus 293 l~~GAd~n~~~-------------------~--L~~A~~---------~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 293 CKRGASTDCGD-------------------L--VMTARR---------NYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp HTTSCSSTTCC-------------------H--HHHHHH---------TTCHHHHHHHHHTTCCC--
T ss_pred HHCCCCCCCCC-------------------H--HHHHHH---------cCCHHHHHHHHHCcCCCCC
Confidence 99999775322 1 222221 3468899999999999873
No 33
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=1.6e-29 Score=238.92 Aligned_cols=186 Identities=17% Similarity=0.152 Sum_probs=159.5
Q ss_pred hhHHHHHHhcChHH----HHHH-hhhhhhccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccC--CccccccchH
Q 010293 204 IPILVAAFHCQLNQ----LRSH-CVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEV--DPMHAKRVRR 276 (513)
Q Consensus 204 ~t~L~~A~~~~~~~----L~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~--~~~d~~g~tp 276 (513)
.|+||+|+..+..+ |++. +.+++.++..+.|+++.|+..+. .+++++| +++|+++... +..|..|.||
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~-~~~v~~L----l~~~~~~~~~~~~~~~~~g~t~ 78 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDN-LEAAMVL----MEAAPELVFEPMTSELYEGQTA 78 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTC-HHHHHHH----HHHCGGGGGCCCCSTTTTTCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCC-HHHHHHH----HHcCchhccccccccCCCCcCH
Confidence 68888888888755 4443 55666777888888888888877 5666666 6667776321 2237899999
Q ss_pred HHHHHhcCCHHHHHHHHHcC-CCCC----------------CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchH
Q 010293 277 IHKALDSDDVELLKLLLDES-NVTL----------------DDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTV 339 (513)
Q Consensus 277 Lh~A~~~g~~~~v~~Ll~~g-~~~~----------------~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tp 339 (513)
||+|+..|+.+++++|+++| +++. .|+||||+|+..|+.+++++|+++| +++|.+|..|+||
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~ 157 (232)
T 2rfa_A 79 LHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG-ADIRAQDSLGNTV 157 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCH
Confidence 99999999999999999999 5542 6999999999999999999999998 9999999999999
Q ss_pred HHHHHHcCCHHHH----HHHHhCCCCC------CCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCc
Q 010293 340 LHVAARRKEPAVL----VTLLSKGACA------SETTSDGQTAVAICRRMTRRKDYIEATKQGQET 395 (513)
Q Consensus 340 Lh~A~~~g~~~~v----~~Ll~~gad~------~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~ 395 (513)
||+|+..|+.+++ ++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++|..+
T Consensus 158 L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 158 LHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI 223 (232)
T ss_dssp HHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred HHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 9999999999988 9999999998 589999999999999999999999999998644
No 34
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=5.1e-29 Score=229.88 Aligned_cols=181 Identities=18% Similarity=0.100 Sum_probs=162.2
Q ss_pred hhHHHHHHhcChHHHHHHh----h-hhhhccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHH
Q 010293 204 IPILVAAFHCQLNQLRSHC----V-QRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIH 278 (513)
Q Consensus 204 ~t~L~~A~~~~~~~L~~~~----~-~~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh 278 (513)
.++|+.|+..+..+.++.. . +++..+..+.|+++.|+..+. .+++++| +++|++++.. |..|.||||
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~L----l~~g~~~~~~---~~~g~t~l~ 77 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNND-IEIAKAL----IDRGADINLQ---NSISDSPYL 77 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTC-HHHHHHH----HHTTCCTTCC---CTTSCCHHH
T ss_pred ccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHH----HHcCCCCCCC---CCCCCCHHH
Confidence 7899999998875543333 2 566677889999999998888 6677777 7889999988 899999999
Q ss_pred HHHhcCCHHHHHHHHHcC--CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCC-----
Q 010293 279 KALDSDDVELLKLLLDES--NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKE----- 348 (513)
Q Consensus 279 ~A~~~g~~~~v~~Ll~~g--~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~----- 348 (513)
+|+..|+.+++++|++.+ ++ +..|.||||+|+..|+.+++++|+++++++++.+|..|+||||+|+..++
T Consensus 78 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~ 157 (201)
T 3hra_A 78 YAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLY 157 (201)
T ss_dssp HHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHH
T ss_pred HHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhH
Confidence 999999999999999655 33 57899999999999999999999999889999999999999999999998
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcC
Q 010293 349 PAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQG 392 (513)
Q Consensus 349 ~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g 392 (513)
.+++++|+++|+|++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 158 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 158 QDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99999999999999999999999999999999999999999887
No 35
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=4.7e-29 Score=234.72 Aligned_cols=208 Identities=15% Similarity=0.052 Sum_probs=179.3
Q ss_pred HHHHHHHhcChHHHHHHHHHhccchhh-hcccCCchhHHHHHHhcChHH----HHHHh--hhhhh-ccCCCcchhhhccC
Q 010293 170 ELMYASAAFQMKELVLLFQRRLLNFVE-KALVEDVIPILVAAFHCQLNQ----LRSHC--VQRVV-RSNLDDVCLEKELP 241 (513)
Q Consensus 170 ~lL~~A~~~~~~~L~~~~~~~l~~~~~-k~~~~n~~t~L~~A~~~~~~~----L~~~~--~~~~~-~~~~~~t~l~~a~~ 241 (513)
..|+.|...+..++++.+++.+.+... + ..++.|+||+|+..+..+ |++.+ .++.. .+..+.|+++.++.
T Consensus 4 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 4 YPLHQACMENEFFKVQELLHSKPSLLLQK--DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGGGTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred cHHHHHHHhCCHHHHHHHHhcCccccccC--CCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 368899999999999999998877654 3 345589999999999865 55555 44444 67889999999998
Q ss_pred hhhHHHHHHHHhhcchhhc--cCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCH
Q 010293 242 DEVSGEIKSLRVKSDEECE--ANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNP 315 (513)
Q Consensus 242 ~~~~~~i~~ll~~~~l~~g--a~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~ 315 (513)
.+. .++++++ +++| ++++.. +..|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.
T Consensus 82 ~~~-~~~~~~L----l~~g~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 153 (228)
T 2dzn_A 82 VGN-LEVVKSL----YDRPLKPDLNKI---TNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL 153 (228)
T ss_dssp HCC-HHHHHHH----HSSSSCCCTTCC---CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH
T ss_pred cCC-HHHHHHH----HhCCCCcccccC---CcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH
Confidence 888 5666666 6777 777777 889999999999999999999999999 54 47899999999999999
Q ss_pred HHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHh
Q 010293 316 KVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLL-SKGACASETTSDGQTAVAICRRMTRRKDYIEATK 390 (513)
Q Consensus 316 ~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll-~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~ 390 (513)
+++++|++.+.+++|.+|..|+||||+|+..|+.+++++|+ ++|+|++.+|..|+||||+|+.. ++++++.+
T Consensus 154 ~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 154 KLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp HHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred HHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 99999999987999999999999999999999999999999 89999999999999999999754 45555554
No 36
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=4.3e-30 Score=243.60 Aligned_cols=187 Identities=17% Similarity=0.155 Sum_probs=167.1
Q ss_pred CCchhHHHHHHhcChHH----HHHHhh----hhhhccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccc
Q 010293 201 EDVIPILVAAFHCQLNQ----LRSHCV----QRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAK 272 (513)
Q Consensus 201 ~n~~t~L~~A~~~~~~~----L~~~~~----~~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~ 272 (513)
.++.|+||+|+..+..+ |++.+. +++.++..+.||++.|+..+. .+++++| +++|++++.+ |..
T Consensus 6 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~L----l~~g~~~~~~---~~~ 77 (236)
T 1ikn_D 6 EDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQ-PEIAEAL----LGAGCDPELR---DFR 77 (236)
T ss_dssp -CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTC-HHHHHCC----CSCCCCSCCC---CTT
T ss_pred CCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCC-HHHHHHH----HHcCCCCCCc---CCC
Confidence 45589999999999754 444433 466778889999999998888 6677766 7889999988 899
Q ss_pred cchHHHHHHhcCCHHHHHHHHHcC-C---------CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCchHHH
Q 010293 273 RVRRIHKALDSDDVELLKLLLDES-N---------VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNA-RGHTVLH 341 (513)
Q Consensus 273 g~tpLh~A~~~g~~~~v~~Ll~~g-~---------~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~-~g~tpLh 341 (513)
|+||||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++++|+++| ++++.++. .|+||||
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~ 156 (236)
T 1ikn_D 78 GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLG-ADVNAQEPCNGRTALH 156 (236)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCHHH
Confidence 999999999999999999999998 3 2467999999999999999999999998 99999998 9999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcc
Q 010293 342 VAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 396 (513)
Q Consensus 342 ~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 396 (513)
+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+++.
T Consensus 157 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 157 LAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp HHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred HHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 9999999999999999999999999999999999999999999999999999765
No 37
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=9.3e-29 Score=233.96 Aligned_cols=215 Identities=14% Similarity=0.101 Sum_probs=186.5
Q ss_pred HHHHHHHhcChHHHHHHHHHhccchhhhcccCCchhHHHHHHhcChHHHH----HHhhhhhhc-cCCCcchhhhccChhh
Q 010293 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQLR----SHCVQRVVR-SNLDDVCLEKELPDEV 244 (513)
Q Consensus 170 ~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~L~----~~~~~~~~~-~~~~~t~l~~a~~~~~ 244 (513)
..|+.|..++..++++++++.+.+++.++ ..+.++||+|+..+..+++ +.+.+.... +..+.|+++.++..+.
T Consensus 11 ~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~ 88 (240)
T 3eu9_A 11 WDIVKATQYGIYERCRELVEAGYDVRQPD--KENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88 (240)
T ss_dssp CCHHHHHHTTCHHHHHHHHHTTCCTTCCC--TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTC
T ss_pred hHHHHHHHcCChHHHHHHHHcCCCcCCCC--CCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCC
Confidence 35788999999999999999999987764 4458999999999986644 444444433 3458899999999888
Q ss_pred HHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCC-HHHHH
Q 010293 245 SGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCN-PKVFK 319 (513)
Q Consensus 245 ~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~-~~~v~ 319 (513)
.++++++ +++|++++.. +..|.||||+|+..|+.+++++|+++| ++ +..|.||||+|+..++ .++++
T Consensus 89 -~~~v~~L----l~~g~~~~~~---~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 160 (240)
T 3eu9_A 89 -LSMVVQL----MKYGADPSLI---DGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTR 160 (240)
T ss_dssp -HHHHHHH----HHTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHH
T ss_pred -HHHHHHH----HHcCCCCccc---CCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHH
Confidence 6666776 6789999988 899999999999999999999999999 44 5789999999997776 78899
Q ss_pred HHHHcCCCCcccCCC-CCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCc
Q 010293 320 EVLNMGLADLNLKNA-RGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 395 (513)
Q Consensus 320 ~Ll~~~~advn~~d~-~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~ 395 (513)
.|+..+ ++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+..
T Consensus 161 ~L~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 161 LLLTFN-VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp HHHHTT-CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred HHHhcC-CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 998888 99999997 8999999999999999999999999999999999999999999999999999999998753
No 38
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=3.5e-29 Score=234.86 Aligned_cols=202 Identities=15% Similarity=0.118 Sum_probs=173.2
Q ss_pred HHHHhhhhhhc-cCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC
Q 010293 218 LRSHCVQRVVR-SNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES 296 (513)
Q Consensus 218 L~~~~~~~~~~-~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 296 (513)
|++.+.++... +..+.|+++.|+..+. .++++++ +++|++++.. |..|+||||+|+..|+.+++++|++++
T Consensus 10 Ll~~g~~~~~~~d~~g~t~L~~A~~~g~-~~~v~~L----l~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 10 FIYQGASLHNQTDRTGETALHLAARYSR-SDAAKRL----LEASADANIQ---DNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp TEETTCCTTCCCTTTCCCHHHHHHHTTC-HHHHHHH----HHTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred HHHcCCCcccccCCCCCchHHHHHHcCC-HHHHHHH----HHcCCCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 44555666544 6789999999999888 6666666 6789999988 899999999999999999999999998
Q ss_pred --CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc
Q 010293 297 --NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQT 371 (513)
Q Consensus 297 --~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t 371 (513)
++ +..|.||||+|+..|+.+++++|++++ ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus 82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 160 (223)
T 2f8y_A 82 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREET 160 (223)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcC-CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcC
Confidence 33 478999999999999999999999988 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccchhhhhhhhhhhhhhhcccccc
Q 010293 372 AVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPSEA 451 (513)
Q Consensus 372 pL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~~a 451 (513)
|||+|+..|+.+++++|++.|+++...+ ..|.+++..+.. .++.+++++|+++|+
T Consensus 161 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~--------------~~g~t~l~~A~~-----------~~~~~i~~~L~~~g~ 215 (223)
T 2f8y_A 161 PLFLAAREGSYETAKVLLDHFANRDITD--------------HMDRLPRDIAQE-----------RMHHDIVRLLDEYNL 215 (223)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCC--------------TTCCCHHHHHHH-----------TTCHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccc--------------ccCCCHHHHHHH-----------hcchHHHHHHHHcCC
Confidence 9999999999999999999999776443 233344433332 345788899998887
Q ss_pred ch
Q 010293 452 RV 453 (513)
Q Consensus 452 ~~ 453 (513)
..
T Consensus 216 ~~ 217 (223)
T 2f8y_A 216 VR 217 (223)
T ss_dssp SS
T ss_pred Cc
Confidence 54
No 39
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=7.7e-29 Score=222.68 Aligned_cols=154 Identities=25% Similarity=0.325 Sum_probs=134.4
Q ss_pred hHHHHHHhcCCHHHHHHHHHcC-CCC---CCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHH
Q 010293 275 RRIHKALDSDDVELLKLLLDES-NVT---LDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPA 350 (513)
Q Consensus 275 tpLh~A~~~g~~~~v~~Ll~~g-~~~---~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~ 350 (513)
++|+.||+.|+.++|++||++| ++| .+|+||||+|+..++.++++.|+++| ++++.+|.+|+||||+|+..|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~g-ad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcc-cchhhhccCCCCHHHHHHHcCCHH
Confidence 4799999999999999999999 654 78999999999999999999999998 999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccc
Q 010293 351 VLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQ 430 (513)
Q Consensus 351 ~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~ 430 (513)
+|++|+++|+|+|.+|.+|+||||+|+..|+.+++++|++.|++++..+ ..|.+++..+..
T Consensus 85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d--------------~~G~TpL~~A~~----- 145 (169)
T 4gpm_A 85 VVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSD--------------SDGRTPLDLARE----- 145 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--------------TTSCCHHHHHHH-----
T ss_pred HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC--------------CCCCCHHHHHHH-----
Confidence 9999999999999999999999999999999999999999999876544 334445444433
Q ss_pred hhhhhhhhhhhhhhhccccccchh
Q 010293 431 MKLNYLENRVAFARLLFPSEARVA 454 (513)
Q Consensus 431 ~~~l~l~~~~~~~~~l~~~~a~~~ 454 (513)
.++.+++++|+++||++.
T Consensus 146 ------~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 146 ------HGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp ------TTCHHHHHHHHTC-----
T ss_pred ------cCCHHHHHHHHHCCCCcC
Confidence 346889999999999875
No 40
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=1.6e-29 Score=242.83 Aligned_cols=186 Identities=17% Similarity=0.191 Sum_probs=146.4
Q ss_pred hhHHHHHHhcChHH--------HHHHhhhhhh----ccCCCcchhhhccCh---hhHHHHHHHHhhcchhhccCcccCC-
Q 010293 204 IPILVAAFHCQLNQ--------LRSHCVQRVV----RSNLDDVCLEKELPD---EVSGEIKSLRVKSDEECEANIAEVD- 267 (513)
Q Consensus 204 ~t~L~~A~~~~~~~--------L~~~~~~~~~----~~~~~~t~l~~a~~~---~~~~~i~~ll~~~~l~~ga~~~~~~- 267 (513)
.|+||.|+..+..+ |++.+.+++. ++..|.|++|.|+.. +. .+++++| +++|++++..+
T Consensus 3 ~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~-~~~v~~L----l~~g~~~~~~~~ 77 (256)
T 2etb_A 3 RDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGV-NACIMPL----LQIDKDSGNPKP 77 (256)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTB-CTTHHHH----HHHHHHTTCSSC
T ss_pred ccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccch-HHHHHHH----HhcCCcccchhh
Confidence 45556665555431 2234444444 455566666655544 44 3444444 44555554331
Q ss_pred -------ccccccchHHHHHHhcCCHHHHHHHHHcC-CCC---CC-------------CccHHHHHHHcCCHHHHHHHHH
Q 010293 268 -------PMHAKRVRRIHKALDSDDVELLKLLLDES-NVT---LD-------------DAYALHYAAAYCNPKVFKEVLN 323 (513)
Q Consensus 268 -------~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~~---~~-------------g~tpLh~A~~~g~~~~v~~Ll~ 323 (513)
..|..|.||||+|+..|+.++|++|+++| +++ .. |+||||+|+..|+.+++++|++
T Consensus 78 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 157 (256)
T 2etb_A 78 LVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE 157 (256)
T ss_dssp GGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred hcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 12578999999999999999999999999 654 32 9999999999999999999999
Q ss_pred ---cCCCCcccCCCCCchHHHHHHH--cCCHH-------HHHHHHhCCCCC-------CCCCCCCCcHHHHHHHcCCccc
Q 010293 324 ---MGLADLNLKNARGHTVLHVAAR--RKEPA-------VLVTLLSKGACA-------SETTSDGQTAVAICRRMTRRKD 384 (513)
Q Consensus 324 ---~~~advn~~d~~g~tpLh~A~~--~g~~~-------~v~~Ll~~gad~-------~~~d~~g~tpL~~A~~~~~~~~ 384 (513)
.| +++|.+|..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|+||||+|+..|+.++
T Consensus 158 ~~~~g-a~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 236 (256)
T 2etb_A 158 NPHQP-ASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236 (256)
T ss_dssp CSSCC-CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred ccccC-CCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHH
Confidence 66 9999999999999999999 88888 999999999999 9999999999999999999999
Q ss_pred HHHHHhcCCCc
Q 010293 385 YIEATKQGQET 395 (513)
Q Consensus 385 v~~l~~~g~~~ 395 (513)
+++|+++|.++
T Consensus 237 v~~Ll~~g~~~ 247 (256)
T 2etb_A 237 FRHILQREFSG 247 (256)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHhCCCCC
Confidence 99999998643
No 41
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=2.6e-29 Score=245.64 Aligned_cols=208 Identities=12% Similarity=-0.048 Sum_probs=187.9
Q ss_pred HHHHHHHHhcChHHHHHHHHHhccchhhhcccCCchhHHHHHHhcCh----HHHHHHhhhhhhccCCCcchhhhccChhh
Q 010293 169 IELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEV 244 (513)
Q Consensus 169 ~~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~L~~~~~~~~~~~~~~~t~l~~a~~~~~ 244 (513)
...|+.|...+..++++++++.+.+++.+ ++.|+||+|+..+. +.|++.+++++.++..+.||++.|+..+.
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~ 107 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGN 107 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTGGGSCC----TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCC
Confidence 35799999999999999999999998774 35899999999997 44788888888889999999999999888
Q ss_pred HHHHHHHHhhcchhhccCcccCCcccccc-chHHHHHHhcCCHHHHHHHHHcC-CC-CC-CCccHHHHHHHcCCHHHHHH
Q 010293 245 SGEIKSLRVKSDEECEANIAEVDPMHAKR-VRRIHKALDSDDVELLKLLLDES-NV-TL-DDAYALHYAAAYCNPKVFKE 320 (513)
Q Consensus 245 ~~~i~~ll~~~~l~~ga~~~~~~~~d~~g-~tpLh~A~~~g~~~~v~~Ll~~g-~~-~~-~g~tpLh~A~~~g~~~~v~~ 320 (513)
.+++++| +++|++++.. +..| .||||+|+..|+.+++++|+++| ++ +. .|+||||+|+..|+.+++++
T Consensus 108 -~~~v~~L----l~~ga~~~~~---~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~ 179 (285)
T 3kea_A 108 -MQTVKLF----VKKNWRLMFY---GKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMIL 179 (285)
T ss_dssp -HHHHHHH----HHHCGGGGGC---SSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHH
T ss_pred -HHHHHHH----HhcCCCCCcc---CCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHH
Confidence 6677777 7889999988 8888 79999999999999999999999 43 44 89999999999999999999
Q ss_pred HHHcCCCCcccCCCCCchH-HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcc
Q 010293 321 VLNMGLADLNLKNARGHTV-LHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 396 (513)
Q Consensus 321 Ll~~~~advn~~d~~g~tp-Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 396 (513)
|+++| +++|.+|..|+|| ||+|+..|+.+++++|+++|+|++.+|. .|+..|+.+++++|+++|.++.
T Consensus 180 Ll~~g-ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~~ 248 (285)
T 3kea_A 180 LLDYM-TSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKHVEYK 248 (285)
T ss_dssp HHHHH-HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHHHT
T ss_pred HHHcC-CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCCCC
Confidence 99998 9999999999998 9999999999999999999999999983 5677999999999999997554
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=1.7e-28 Score=231.72 Aligned_cols=196 Identities=16% Similarity=0.117 Sum_probs=161.1
Q ss_pred CCcchhhhccChhhHHHHHHHHhhcchhh-ccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC--------CC
Q 010293 231 LDDVCLEKELPDEVSGEIKSLRVKSDEEC-EANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV--------TL 300 (513)
Q Consensus 231 ~~~t~l~~a~~~~~~~~i~~ll~~~~l~~-ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~--------~~ 300 (513)
.|.|+++.|+..+....+ +.+ +.. |++++.+ |..|+||||+|+..|+.+++++|+++| ++ |.
T Consensus 2 ~g~t~L~~A~~~g~~~~v-~~L----l~~~g~~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~ 73 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQAL-SKL----LKFEGCEVHQR---GAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELY 73 (232)
T ss_dssp CTTCHHHHHHHTTCHHHH-HHH----HTTTCSCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTT
T ss_pred CCCCHHHHHHHcCCHHHH-HHH----HHhcCCCcccC---CCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCC
Confidence 478999999999984444 444 344 8999988 899999999999999999999999998 42 35
Q ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-------------CCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q 010293 301 DDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNA-------------RGHTVLHVAARRKEPAVLVTLLSKGACASETTS 367 (513)
Q Consensus 301 ~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~-------------~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~ 367 (513)
.|+||||+|+..|+.+++++|+++| ++++.++. .|+||||+|+..|+.+++++|+++|+|++.+|.
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 152 (232)
T 2rfa_A 74 EGQTALHIAVINQNVNLVRALLARG-ASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDS 152 (232)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCcCHHHHHHHcCCHHHHHHHHhCC-CCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 8999999999999999999999998 99998876 799999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCcccH----HHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccchhhhhhhhhhhhh
Q 010293 368 DGQTAVAICRRMTRRKDY----IEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFA 443 (513)
Q Consensus 368 ~g~tpL~~A~~~~~~~~v----~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~ 443 (513)
.|+||||+|+..|+.+++ ++|++.|+++.... ........|.+++..+.. .++.+++
T Consensus 153 ~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~--------~~~~~~~~g~tpl~~A~~-----------~g~~~~v 213 (232)
T 2rfa_A 153 LGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKS--------LELVPNNQGLTPFKLAGV-----------EGNIVMF 213 (232)
T ss_dssp TSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCC--------GGGCCCTTSCCHHHHHHH-----------HTCHHHH
T ss_pred CCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhh--------hhccCCCCCCCHHHHHHH-----------cCCHHHH
Confidence 999999999999999888 99999998764222 001111234444444432 3468889
Q ss_pred hhccccccchh
Q 010293 444 RLLFPSEARVA 454 (513)
Q Consensus 444 ~~l~~~~a~~~ 454 (513)
++|+++|+...
T Consensus 214 ~~Ll~~g~~~~ 224 (232)
T 2rfa_A 214 QHLMQKRKHIA 224 (232)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHhcCccch
Confidence 99998887654
No 43
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=8e-29 Score=243.16 Aligned_cols=188 Identities=16% Similarity=0.124 Sum_probs=121.8
Q ss_pred hhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHH
Q 010293 204 IPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHK 279 (513)
Q Consensus 204 ~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~ 279 (513)
.++|+.|+..|..+ |++.+++++..+..+.|+++.|+..+. .+++++| +++|++++.. |..|+||||+
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~-~~~v~~L----l~~ga~~~~~---~~~g~tpL~~ 112 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDN-VDMVKFL----VENGANINQP---DNEGWIPLHA 112 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTC-HHHHHHH----HHTTCCTTCC---CTTSCCHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCC-HHHHHHH----HHCCCCCCCC---CCCCCcHHHH
Confidence 45555555555422 444444555555555566665555555 4455555 5566777666 6677777777
Q ss_pred HHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccc------------------------
Q 010293 280 ALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNL------------------------ 331 (513)
Q Consensus 280 A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~------------------------ 331 (513)
|+..|+.++|++|+++| ++ |..|.||||+|+..++.++++.++...+++++.
T Consensus 113 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 192 (299)
T 1s70_B 113 AASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIND 192 (299)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcch
Confidence 77777777777777777 33 456777777777777777766666544444432
Q ss_pred --CCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCccccc
Q 010293 332 --KNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDR 399 (513)
Q Consensus 332 --~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~ 399 (513)
.+..|.||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+..|+.+++++|++.|+++...+
T Consensus 193 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d 262 (299)
T 1s70_B 193 VRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVN 262 (299)
T ss_dssp CCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred hhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcC
Confidence 45567777777777777777777777777777777777777777777777777777777777655433
No 44
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=7.1e-29 Score=243.55 Aligned_cols=201 Identities=20% Similarity=0.106 Sum_probs=179.7
Q ss_pred HHHHHHHHhcChHHHHHHHHHhccchhhhcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhh
Q 010293 169 IELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEV 244 (513)
Q Consensus 169 ~~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~ 244 (513)
..+|+.|+..|..++++++++.+.+++.++ .++.|+||+|+..+..+ |++.+++++..+..+.||++.|+..+.
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~ 118 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGADINYAN--VDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY 118 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCTTCBC--TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCcccC--CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 468999999999999999999999988764 44589999999999844 777778888888999999999999888
Q ss_pred HHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC--C-------------------------
Q 010293 245 SGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES--N------------------------- 297 (513)
Q Consensus 245 ~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g--~------------------------- 297 (513)
.+++++| +++|++++.. |..|.||||+|+..|+.++++.++... +
T Consensus 119 -~~~v~~L----l~~g~~~~~~---~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (299)
T 1s70_B 119 -LDIAEYL----ISQGAHVGAV---NSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (299)
T ss_dssp -HHHHHHH----HHTTCCTTCC---CTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred -HHHHHHH----HhCCCCCCCc---CCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence 6677777 7889999988 899999999999999999998877542 1
Q ss_pred ----CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHH
Q 010293 298 ----VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAV 373 (513)
Q Consensus 298 ----~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL 373 (513)
.+..|.||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|+|||
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l 269 (299)
T 1s70_B 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAF 269 (299)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTT
T ss_pred chhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 2367999999999999999999999988 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHcC
Q 010293 374 AICRRMT 380 (513)
Q Consensus 374 ~~A~~~~ 380 (513)
|+|+...
T Consensus 270 ~~A~~~~ 276 (299)
T 1s70_B 270 DVADEDI 276 (299)
T ss_dssp TSCCSGG
T ss_pred HHHHHHH
Confidence 9997643
No 45
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=1e-28 Score=239.58 Aligned_cols=190 Identities=18% Similarity=0.167 Sum_probs=155.0
Q ss_pred CCchhHHHHHHhcChHH----HHHHhhhhh--------hccCCCcchhhhccCh---hhHHHHHHHHhhcchhhccCc--
Q 010293 201 EDVIPILVAAFHCQLNQ----LRSHCVQRV--------VRSNLDDVCLEKELPD---EVSGEIKSLRVKSDEECEANI-- 263 (513)
Q Consensus 201 ~n~~t~L~~A~~~~~~~----L~~~~~~~~--------~~~~~~~t~l~~a~~~---~~~~~i~~ll~~~~l~~ga~~-- 263 (513)
..+.++|+.|+..+..+ |++.+.+.. .++..+.|+++.|+.. +. .+++++| +++|+++
T Consensus 11 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~-~~~v~~L----l~~ga~~~~ 85 (273)
T 2pnn_A 11 LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQ-NDTIALL----LDVARKTDS 85 (273)
T ss_dssp CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTB-CHHHHHH----HHHHHHTTC
T ss_pred cccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCC-hHHHHHH----HHhhccccc
Confidence 44588999999888744 555443221 2366788999988753 55 5566666 5666653
Q ss_pred -----cc-CCccccccchHHHHHHhcCCHHHHHHHHHcC-CCC---C--------------CCccHHHHHHHcCCHHHHH
Q 010293 264 -----AE-VDPMHAKRVRRIHKALDSDDVELLKLLLDES-NVT---L--------------DDAYALHYAAAYCNPKVFK 319 (513)
Q Consensus 264 -----~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~~---~--------------~g~tpLh~A~~~g~~~~v~ 319 (513)
+. ....|..|+||||+|+..|+.++|++|+++| +++ . .|+||||+|+..|+.++++
T Consensus 86 ~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~ 165 (273)
T 2pnn_A 86 LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVK 165 (273)
T ss_dssp HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHH
T ss_pred hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHH
Confidence 22 0112679999999999999999999999999 654 3 6999999999999999999
Q ss_pred HHHH---cCCCCcccCCCCCchHHHHHHHcCC---------HHHHHHHHhCCCCCC-------CCCCCCCcHHHHHHHcC
Q 010293 320 EVLN---MGLADLNLKNARGHTVLHVAARRKE---------PAVLVTLLSKGACAS-------ETTSDGQTAVAICRRMT 380 (513)
Q Consensus 320 ~Ll~---~~~advn~~d~~g~tpLh~A~~~g~---------~~~v~~Ll~~gad~~-------~~d~~g~tpL~~A~~~~ 380 (513)
+|++ .| +++|.+|..|+||||+|+..|+ .+++++|+++|++++ .+|..|+||||+|+..|
T Consensus 166 ~Ll~~~~~g-ad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g 244 (273)
T 2pnn_A 166 FLLQNSWQP-ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSG 244 (273)
T ss_dssp HHHHCSSCC-CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred HHHhcccCC-CCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhC
Confidence 9999 66 9999999999999999999998 899999999999997 48999999999999999
Q ss_pred CcccHHHHHhcCC-Ccc
Q 010293 381 RRKDYIEATKQGQ-ETN 396 (513)
Q Consensus 381 ~~~~v~~l~~~g~-~~~ 396 (513)
+.+++++|+++|+ +|.
T Consensus 245 ~~~iv~~Ll~~ga~dp~ 261 (273)
T 2pnn_A 245 KIGVLAYILQREIHEPE 261 (273)
T ss_dssp CHHHHHHHHHHHTC---
T ss_pred hHHHHHHHHHCCCCCch
Confidence 9999999999998 543
No 46
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=3.6e-29 Score=236.59 Aligned_cols=190 Identities=18% Similarity=0.126 Sum_probs=154.5
Q ss_pred chhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccc
Q 010293 256 DEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNL 331 (513)
Q Consensus 256 ~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~ 331 (513)
++.+|++++..+..+..|.||||+|+..|+.++|++|++.| ++ |..|+||||+|+..|+.+++++|++.| +++|.
T Consensus 4 ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~n~ 82 (229)
T 2vge_A 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAG-ANVNS 82 (229)
T ss_dssp ------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTC
T ss_pred hhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCC
Confidence 36788999988888899999999999999999999999999 55 478999999999999999999999998 99999
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHH--HHcCCcccHHHHHhcCCCcccccchHHHHHHH
Q 010293 332 KNARGHTVLHVAARRKEPAVLVTLLSKGACASETT-SDGQTAVAIC--RRMTRRKDYIEATKQGQETNKDRLCIDVLERE 408 (513)
Q Consensus 332 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d-~~g~tpL~~A--~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~ 408 (513)
+|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+| +..|+.+++++|++.|++++..+ .
T Consensus 83 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~--------~ 154 (229)
T 2vge_A 83 PDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMN--------S 154 (229)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSG--------G
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccccc--------C
Confidence 99999999999999999999999999999999997 6999999999 99999999999999988665433 1
Q ss_pred HhcccCCCCcccchhhhccccchhhhhhhhhhhhhhhccccccchhhhhhcccCCccccccccccCCCC
Q 010293 409 MRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPSEARVAMHIADADATNFYTGLSASKSKGS 477 (513)
Q Consensus 409 ~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~~a~~~~~~a~~~~~~~~~~l~~a~~~~~ 477 (513)
.. .++++.-......++|+..|+++.+. ..+..|.|||+.|+..+.
T Consensus 155 ~~--------------------~~~l~~~~~~~~~~~ll~~ga~~~~~---~~d~~G~TpL~~A~~~g~ 200 (229)
T 2vge_A 155 GA--------------------VYALWDYSAEFGDELSFREGESVTVL---RRDGPEETDWWWAALHGQ 200 (229)
T ss_dssp GE--------------------EEESSCBCCSSTTBCCBCTTCEEEEE---ESSCTTCSSEEEEEETTE
T ss_pred Cc--------------------hHHHHHHhhccccccCcccccccccc---ccCCCcccHHHHHHHcCC
Confidence 11 11111111122347888889884311 466779999999976653
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=1.3e-27 Score=220.49 Aligned_cols=189 Identities=17% Similarity=0.200 Sum_probs=161.9
Q ss_pred CCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccH
Q 010293 230 NLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYA 305 (513)
Q Consensus 230 ~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tp 305 (513)
..+.++++.++..+....+..++ ...+.+++.. |.+|.||||+|+..|+.++|++|+++| ++ +..|+||
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll----~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 75 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEIL----QDTTYQVDEV---DTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSP 75 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHH----TCTTCCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred cccccHHHHHHHhccHHHHHHHH----HcCCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 46789999999999877777766 3344588887 889999999999999999999999999 55 4779999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHcCC---
Q 010293 306 LHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKG-ACASETTSDGQTAVAICRRMTR--- 381 (513)
Q Consensus 306 Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~--- 381 (513)
||+|+..|+.+++++|+..++++++.+|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++
T Consensus 76 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~ 155 (201)
T 3hra_A 76 YLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQ 155 (201)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSH
T ss_pred HHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchh
Confidence 999999999999999997777999999999999999999999999999999999 9999999999999999999998
Q ss_pred --cccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccchhhhhhhhhhhhhhhccccc
Q 010293 382 --RKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPSE 450 (513)
Q Consensus 382 --~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~~ 450 (513)
.+++++|++.|++++..+ ..|.+++..+.. .++.+++++|+++|
T Consensus 156 ~~~~~v~~Ll~~ga~~~~~~--------------~~g~t~l~~A~~-----------~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 156 LYQDIVKLLMENGADQSIKD--------------NSGRTAMDYANQ-----------KGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHHHHTTCCTTCCC--------------TTSCCHHHHHHH-----------HTCHHHHHHHHTCC
T ss_pred hHHHHHHHHHHCCCCCCccC--------------CCCCCHHHHHHH-----------cCCHhHHHHHHhcC
Confidence 899999999999876544 234444444433 34577788877665
No 48
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=2.7e-28 Score=231.26 Aligned_cols=212 Identities=15% Similarity=0.093 Sum_probs=168.2
Q ss_pred ccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCc
Q 010293 228 RSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDA 303 (513)
Q Consensus 228 ~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~ 303 (513)
.+..|.|++|.|+..+. .++++.+.......|++++.. |..|+||||+|+..|+.++|++|+++| ++ |..|+
T Consensus 4 ~d~~g~t~L~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 79 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEE-KALTMEVIRQVKGDLAFLNFQ---NNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGN 79 (236)
T ss_dssp ---CCCCTTHHHHHTTC-SSSSSCCCC-----CCCCCCC---CTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCC
T ss_pred CCCCCCchhHHHHHcCC-hhHHHHHHHHhhccHHHhhcc---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 56789999999988777 344444423323344577777 899999999999999999999999999 54 47899
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCC------cccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHH
Q 010293 304 YALHYAAAYCNPKVFKEVLNMGLAD------LNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTS-DGQTAVAIC 376 (513)
Q Consensus 304 tpLh~A~~~g~~~~v~~Ll~~~~ad------vn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~-~g~tpL~~A 376 (513)
||||+|+..|+.+++++|+..+ ++ ++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A 158 (236)
T 1ikn_D 80 TPLHLACEQGCLASVGVLTQSC-TTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLA 158 (236)
T ss_dssp CHHHHHHHHTCHHHHHHHHHST-TTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcc-cchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999987 54 688899999999999999999999999999999999998 999999999
Q ss_pred HHcCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccchhhhhhhhhhhhhhhccccccchhhh
Q 010293 377 RRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPSEARVAMH 456 (513)
Q Consensus 377 ~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~~a~~~~~ 456 (513)
+..|+.+++++|++.|++++..+ ..|.+++..+.. .++.+++++|+++|++....
T Consensus 159 ~~~~~~~~v~~Ll~~ga~~~~~~--------------~~g~tpl~~A~~-----------~~~~~~~~~Ll~~ga~~~~~ 213 (236)
T 1ikn_D 159 VDLQNPDLVSLLLKCGADVNRVT--------------YQGYSPYQLTWG-----------RPSTRIQQQLGQLTLENLQM 213 (236)
T ss_dssp HHTTCHHHHHHHHTTTCCSCCCC--------------TTCCCGGGGCTT-----------SSCHHHHHHHHTTSCGGGSS
T ss_pred HHcCCHHHHHHHHHcCCCCCccc--------------CCCCCHHHHHHc-----------cCchHHHHHHHHcchhhhhc
Confidence 99999999999999999876544 234444444432 34688999999999976522
Q ss_pred hhcccCCccccccccc
Q 010293 457 IADADATNFYTGLSAS 472 (513)
Q Consensus 457 ~a~~~~~~~~~~l~~a 472 (513)
.....+.|+...+
T Consensus 214 ---~~~~~~~~~~~~~ 226 (236)
T 1ikn_D 214 ---LPESEDEESYDTE 226 (236)
T ss_dssp ---CCCCCTTTCCCCC
T ss_pred ---CCccchHHHHhhh
Confidence 2334456666554
No 49
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=1.2e-28 Score=236.61 Aligned_cols=201 Identities=19% Similarity=0.128 Sum_probs=160.6
Q ss_pred CCcchhhhccChhhHHHHHHHHhhcchhhccCccc----CCccccccchHHHHHHhc---CCHHHHHHHHHcC-CCC---
Q 010293 231 LDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAE----VDPMHAKRVRRIHKALDS---DDVELLKLLLDES-NVT--- 299 (513)
Q Consensus 231 ~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~----~~~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~g-~~~--- 299 (513)
+|.|+++.|+..+....+..++ +.++.+|++++. . |..|+||||+|+.. |+.++|++|++.| +++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll-~~l~~~g~~i~~~~~~~---d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~ 76 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLL-EYLRWNSKYLTDSAYTE---GSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPK 76 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHH-HHHHHHTCCTTSGGGSB---TTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSS
T ss_pred CCccHHHHHHHcCCHHHHHHHH-HHHHHcCCCcccccccC---CCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchh
Confidence 4788999888877744322222 333788999998 6 89999999999999 9999999999998 332
Q ss_pred -----------CCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC-------------CchHHHHHHHcCCHHHHHHH
Q 010293 300 -----------LDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNAR-------------GHTVLHVAARRKEPAVLVTL 355 (513)
Q Consensus 300 -----------~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~-------------g~tpLh~A~~~g~~~~v~~L 355 (513)
..|+||||+|+..|+.+++++|+++| +++|.+|.. |+||||+|+..|+.+++++|
T Consensus 77 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L 155 (256)
T 2etb_A 77 PLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENG-ADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYL 155 (256)
T ss_dssp CGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred hhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 57999999999999999999999998 999999986 99999999999999999999
Q ss_pred Hh---CCCCCCCCCCCCCcHHHHHHH--cCCcc-------cHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchh
Q 010293 356 LS---KGACASETTSDGQTAVAICRR--MTRRK-------DYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSE 423 (513)
Q Consensus 356 l~---~gad~~~~d~~g~tpL~~A~~--~~~~~-------~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~ 423 (513)
++ +|+|++.+|..|+||||+|+. .++.+ ++++|++.|+++..... ........|.++++.+
T Consensus 156 l~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~-------~~~~~d~~g~tpL~~A 228 (256)
T 2etb_A 156 LENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQ-------LEEISNHQGLTPLKLA 228 (256)
T ss_dssp HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCC-------GGGCCCTTSCCHHHHH
T ss_pred HhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccc-------cccccCCCCCCHHHHH
Confidence 99 999999999999999999999 67777 99999999876531110 0011112344444444
Q ss_pred hhccccchhhhhhhhhhhhhhhccccccchh
Q 010293 424 VMADDFQMKLNYLENRVAFARLLFPSEARVA 454 (513)
Q Consensus 424 ~~~~~~~~~~l~l~~~~~~~~~l~~~~a~~~ 454 (513)
.. .++.+++++|+++|++..
T Consensus 229 ~~-----------~g~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 229 AK-----------EGKIEIFRHILQREFSGA 248 (256)
T ss_dssp HH-----------TTCHHHHHHHHHHHHHHH
T ss_pred HH-----------hCCHHHHHHHHhCCCCCC
Confidence 33 345888899998887765
No 50
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=7.1e-28 Score=220.89 Aligned_cols=158 Identities=20% Similarity=0.175 Sum_probs=142.5
Q ss_pred hccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCC
Q 010293 227 VRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDD 302 (513)
Q Consensus 227 ~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g 302 (513)
.++..+.|+++.|+..+. .++++.+ +++|++++.. |..|+||||+|+..|+.+++++|+++| ++ |..|
T Consensus 30 ~~d~~g~t~L~~A~~~g~-~~~v~~L----l~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 101 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGM-ENAIDKL----VENFDKLEDK---DIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSG 101 (192)
T ss_dssp CCCTTCCCHHHHHHHHTC-GGGHHHH----HHHHCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTS
T ss_pred CcCCCCCCHHHHHHHcCC-HHHHHHH----HHhccccccc---cccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 456677777777777666 4445555 5678898888 889999999999999999999999999 54 5779
Q ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCc
Q 010293 303 AYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRR 382 (513)
Q Consensus 303 ~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~ 382 (513)
+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 180 (192)
T 2rfm_A 102 KTPLMWSIIFGYSEMSYFLLEHG-ANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQ 180 (192)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred CcHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcH
Confidence 99999999999999999999998 99999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHhcCC
Q 010293 383 KDYIEATKQGQ 393 (513)
Q Consensus 383 ~~v~~l~~~g~ 393 (513)
+++++|++.|.
T Consensus 181 ~~v~~Ll~~~~ 191 (192)
T 2rfm_A 181 EVIKIFTEVRR 191 (192)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhccC
Confidence 99999998763
No 51
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=3.6e-28 Score=233.71 Aligned_cols=125 Identities=19% Similarity=0.253 Sum_probs=117.3
Q ss_pred ccccchHHHHHHhcCCHHHHHHHHHcC-CCC-----------------CCCccHHHHHHHcCCHHHHHHHHH---cCCCC
Q 010293 270 HAKRVRRIHKALDSDDVELLKLLLDES-NVT-----------------LDDAYALHYAAAYCNPKVFKEVLN---MGLAD 328 (513)
Q Consensus 270 d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~~-----------------~~g~tpLh~A~~~g~~~~v~~Ll~---~~~ad 328 (513)
|..|+||||+|+..|+.++|++|+++| +++ ..|+||||+|+..|+.+++++|++ +| ++
T Consensus 90 d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g-a~ 168 (260)
T 3jxi_A 90 YYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ-AD 168 (260)
T ss_dssp SEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC-CC
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC-CC
Confidence 779999999999999999999999999 554 359999999999999999999999 66 99
Q ss_pred cccCCCCCchHHHHHHHcCC---------HHHHHHHHhCCCCC-------CCCCCCCCcHHHHHHHcCCcccHHHHHhcC
Q 010293 329 LNLKNARGHTVLHVAARRKE---------PAVLVTLLSKGACA-------SETTSDGQTAVAICRRMTRRKDYIEATKQG 392 (513)
Q Consensus 329 vn~~d~~g~tpLh~A~~~g~---------~~~v~~Ll~~gad~-------~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g 392 (513)
+|.+|..|+||||+|+..|+ .+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++|
T Consensus 169 ~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 248 (260)
T 3jxi_A 169 LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRRE 248 (260)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 99999999999999999888 79999999999999 679999999999999999999999999998
Q ss_pred CCc
Q 010293 393 QET 395 (513)
Q Consensus 393 ~~~ 395 (513)
..+
T Consensus 249 ~~~ 251 (260)
T 3jxi_A 249 IAD 251 (260)
T ss_dssp HHH
T ss_pred CCc
Confidence 643
No 52
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=1.4e-28 Score=238.51 Aligned_cols=211 Identities=16% Similarity=0.121 Sum_probs=159.0
Q ss_pred hhhhccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCC-ccccccchHHHHHHhc---CCHHHHHHHHHcC-C-
Q 010293 224 QRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVD-PMHAKRVRRIHKALDS---DDVELLKLLLDES-N- 297 (513)
Q Consensus 224 ~~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~-~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~g-~- 297 (513)
.....+..+.|+++.|+..+.... ++.+.....+.|++++..+ ..|..|+||||+|+.. |+.++|++|+++| +
T Consensus 5 ~~~~~d~~g~t~L~~A~~~g~~~~-v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~ 83 (273)
T 2pnn_A 5 GEKPPRLYDRRSIFDAVAQSNCQE-LESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKT 83 (273)
T ss_dssp ------CCCHHHHHHHHHTTCSST-TTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHT
T ss_pred cCCCCCcccchHHHHHHHcCCHHH-HHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccc
Confidence 344567889999999988777333 3333233355677766321 1278999999999987 9999999999997 3
Q ss_pred -------------CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCC--------------CCchHHHHHHHcCCHH
Q 010293 298 -------------VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNA--------------RGHTVLHVAARRKEPA 350 (513)
Q Consensus 298 -------------~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~--------------~g~tpLh~A~~~g~~~ 350 (513)
.|..|+||||+|+..|+.+++++|+++| ++++.++. .|+||||+|+..|+.+
T Consensus 84 ~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 162 (273)
T 2pnn_A 84 DSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENG-ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLA 162 (273)
T ss_dssp TCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHH
T ss_pred cchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCC-CCcCccccccccccccccccccCCCCHHHHHHHcCCHH
Confidence 3458999999999999999999999997 99999997 7999999999999999
Q ss_pred HHHHHHh---CCCCCCCCCCCCCcHHHHHHHcCC---------cccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCc
Q 010293 351 VLVTLLS---KGACASETTSDGQTAVAICRRMTR---------RKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNL 418 (513)
Q Consensus 351 ~v~~Ll~---~gad~~~~d~~g~tpL~~A~~~~~---------~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~ 418 (513)
+|++|++ +|++++.+|..|+||||+|+..|+ .+++++|++.|++++..... .......|.+
T Consensus 163 ~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~-------~~~~d~~g~T 235 (273)
T 2pnn_A 163 IVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKL-------EEITNRKGLT 235 (273)
T ss_dssp HHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCG-------GGCCCTTSCC
T ss_pred HHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccccccc-------ccccCCCCCC
Confidence 9999999 999999999999999999999998 68888999988765431100 0001123444
Q ss_pred ccchhhhccccchhhhhhhhhhhhhhhcccccc-chh
Q 010293 419 ALSSEVMADDFQMKLNYLENRVAFARLLFPSEA-RVA 454 (513)
Q Consensus 419 ~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~~a-~~~ 454 (513)
+++.+.. .++.+++++|+++|| +..
T Consensus 236 pL~~A~~-----------~g~~~iv~~Ll~~ga~dp~ 261 (273)
T 2pnn_A 236 PLALAAS-----------SGKIGVLAYILQREIHEPE 261 (273)
T ss_dssp HHHHHHH-----------TTCHHHHHHHHHHHTC---
T ss_pred HHHHHHH-----------hChHHHHHHHHHCCCCCch
Confidence 4443332 346899999999999 443
No 53
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=2.4e-27 Score=212.87 Aligned_cols=154 Identities=21% Similarity=0.195 Sum_probs=138.6
Q ss_pred CCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccH
Q 010293 230 NLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYA 305 (513)
Q Consensus 230 ~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tp 305 (513)
..+.++++.|+..+. .++++++ +++|++++.+ |..|.||||+|+..|+.+++++|+++| ++ |..|+||
T Consensus 12 ~~~~~~l~~A~~~g~-~~~v~~L----l~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 83 (169)
T 2y1l_E 12 SDLGKKLLEAARAGR-DDEVRIL----MANGADVNAE---DASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTP 83 (169)
T ss_dssp -CHHHHHHHHHHHTC-HHHHHHH----HHTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CcccchHHHHHHcCC-HHHHHHH----HHCCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCH
Confidence 344566777777777 4555555 6778999888 889999999999999999999999999 54 4789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccH
Q 010293 306 LHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDY 385 (513)
Q Consensus 306 Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v 385 (513)
||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++
T Consensus 84 L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 162 (169)
T 2y1l_E 84 LRLAALFGHLEIVEVLLKNG-ADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLA 162 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHH
Confidence 99999999999999999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcC
Q 010293 386 IEATKQG 392 (513)
Q Consensus 386 ~~l~~~g 392 (513)
++|++.|
T Consensus 163 ~~L~~~G 169 (169)
T 2y1l_E 163 EILQKLN 169 (169)
T ss_dssp HHHHTC-
T ss_pred HHHHHcC
Confidence 9999876
No 54
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=8.4e-29 Score=246.92 Aligned_cols=242 Identities=12% Similarity=0.059 Sum_probs=168.4
Q ss_pred HHHHHHHHHhccchhhhcccCCchhHHHHHHhcCh----HHHHHHhhhhhhccC--------------CCcc---hhhhc
Q 010293 181 KELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSN--------------LDDV---CLEKE 239 (513)
Q Consensus 181 ~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~L~~~~~~~~~~~~--------------~~~t---~l~~a 239 (513)
.++++++++.+++++.++. ++.++++ +. +.|++++++...... .+.+ ..+.+
T Consensus 32 ~dlv~~ll~~ga~i~~~~~--~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a 104 (327)
T 1sw6_A 32 HDLTSDFLSSPLKIMKALP--SPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVS 104 (327)
T ss_dssp TTCCCSTTTSSCCCEECBC--CCCCCCH-----HHHHHHHHHHHHHHC-------------------------------C
T ss_pred CchHHHHhhCCcccccCCC--CCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHH
Confidence 3456777888888877643 3356655 33 345666655432100 0000 11222
Q ss_pred cChhhHHHHHHHHhhcchhhccCccc-CCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCC
Q 010293 240 LPDEVSGEIKSLRVKSDEECEANIAE-VDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCN 314 (513)
Q Consensus 240 ~~~~~~~~i~~ll~~~~l~~ga~~~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~ 314 (513)
+ .+...++++++ +.+|+++|. + |.+|+||||+|+..|+.++|++|+++| ++ |..|+||||+|+..|+
T Consensus 105 ~-~~~~~~~~~~l----~~~g~dvn~~~---d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 105 F-DSLLQEVNDAF----PNTQLNLNIPV---DEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp H-HHHHHHHHHHC----TTSCCCSCSCC---STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSH
T ss_pred H-HhhHHHHHHHH----HhcCCCccccc---CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcc
Confidence 2 23335555555 788999998 7 999999999999999999999999999 65 4789999999999998
Q ss_pred ---HHHHHHHHHcCCCCcccCCCCCchHHHHHHH----cCCHHHHHHHHhC--------------------CCCCCCCCC
Q 010293 315 ---PKVFKEVLNMGLADLNLKNARGHTVLHVAAR----RKEPAVLVTLLSK--------------------GACASETTS 367 (513)
Q Consensus 315 ---~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~----~g~~~~v~~Ll~~--------------------gad~~~~d~ 367 (513)
.++++.|++.+.++++.+|..|+||||+|+. .|+.+++++|++. |++++.++.
T Consensus 177 ~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~ 256 (327)
T 1sw6_A 177 NYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNG 256 (327)
T ss_dssp HHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-------------
T ss_pred cccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccc
Confidence 6888888888768899999999999999999 8999999999987 999999999
Q ss_pred CCCcHHHHHHHcCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccchhhhhhhhhhhhhhhcc
Q 010293 368 DGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLF 447 (513)
Q Consensus 368 ~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~ 447 (513)
.|+||||+|+. +++|++.+. +..+ ..|.++++.++. .++.+++++|+
T Consensus 257 ~g~t~L~~a~~------~~~Ll~~~~--n~~d--------------~~G~TpLh~A~~-----------~g~~~~v~~Ll 303 (327)
T 1sw6_A 257 ERKDSILENLD------LKWIIANML--NAQD--------------SNGDTCLNIAAR-----------LGNISIVDALL 303 (327)
T ss_dssp ---CHHHHHCS------HHHHHHHTT--TCCC--------------TTSCCHHHHHHH-----------HCCHHHHHHHH
T ss_pred cCCChhHHHHH------HHHHHHhCC--CCCC--------------CCCCCHHHHHHH-----------cCCHHHHHHHH
Confidence 99999999985 777877642 2111 234455554443 34689999999
Q ss_pred ccccchhhhhhcccCCccccccccccCC
Q 010293 448 PSEARVAMHIADADATNFYTGLSASKSK 475 (513)
Q Consensus 448 ~~~a~~~~~~a~~~~~~~~~~l~~a~~~ 475 (513)
++||+++ ..+..|.|||+.|+..
T Consensus 304 ~~Gad~~-----~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 304 DYGADPF-----IANKSGLRPVDFGAGL 326 (327)
T ss_dssp HTTCCTT-----CCCTTSCCGGGGTCC-
T ss_pred HcCCCCc-----ccCCCCCCHHHHHHhc
Confidence 9999998 7888999999999543
No 55
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.95 E-value=5.3e-27 Score=221.84 Aligned_cols=219 Identities=13% Similarity=0.067 Sum_probs=183.1
Q ss_pred CchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHH
Q 010293 202 DVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRI 277 (513)
Q Consensus 202 n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpL 277 (513)
...++|+.|+..+..+ |++.+.++..++..+.|+++.|+..+. .++++++ +++|++++.. .+..|.|||
T Consensus 8 ~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~L----l~~~~~~~~~--~~~~~~t~L 80 (240)
T 3eu9_A 8 YSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNR-IDLVKYY----ISKGAIVDQL--GGDLNSTPL 80 (240)
T ss_dssp GGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHH----HHTTCCTTCC--BTTTTBCHH
T ss_pred ccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCC-HHHHHHH----HHcCCcchhh--cCCcCCChh
Confidence 3478999999999744 667777787888899999999999888 5666766 6778888766 245699999
Q ss_pred HHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCC-HHHH
Q 010293 278 HKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKE-PAVL 352 (513)
Q Consensus 278 h~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~-~~~v 352 (513)
|+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++++|++++ ++++.++..|.||||+|+..++ .+++
T Consensus 81 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~ 159 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG-QDVDMMDQNGMTPLMWAAYRTHSVDPT 159 (240)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCSSTTH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHhCChHHHH
Confidence 9999999999999999999 44 578999999999999999999999998 9999999999999999997776 8999
Q ss_pred HHHHhCCCCCCCCCC-CCCcHHHHHHHcCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccch
Q 010293 353 VTLLSKGACASETTS-DGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQM 431 (513)
Q Consensus 353 ~~Ll~~gad~~~~d~-~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~ 431 (513)
++|++.|++++..+. .|+||||+|+..|+.+++++|++.|++++..+ ..|.+++..+...
T Consensus 160 ~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--------------~~g~t~l~~A~~~----- 220 (240)
T 3eu9_A 160 RLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQN--------------IKGESALDLAKQR----- 220 (240)
T ss_dssp HHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBC--------------TTSCBHHHHHHHT-----
T ss_pred HHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC--------------CCCCCHHHHHHHc-----
Confidence 999999999999997 99999999999999999999999999876544 2344444444333
Q ss_pred hhhhhhhhhhhhhhccccccch
Q 010293 432 KLNYLENRVAFARLLFPSEARV 453 (513)
Q Consensus 432 ~~l~l~~~~~~~~~l~~~~a~~ 453 (513)
++.+++++|++++++.
T Consensus 221 ------~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 221 ------KNVWMINHLQEARQAK 236 (240)
T ss_dssp ------TCHHHHHHHHHHC---
T ss_pred ------CcHHHHHHHHHhhhcc
Confidence 3577888888777654
No 56
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=2.4e-27 Score=210.91 Aligned_cols=153 Identities=18% Similarity=0.139 Sum_probs=135.8
Q ss_pred CcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHH
Q 010293 232 DDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALH 307 (513)
Q Consensus 232 ~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh 307 (513)
..++++.|+..+. .++++.+ +++|++++.. |..|+||||+|+. |+.+++++|+++| ++ +..|+||||
T Consensus 5 ~~~~L~~A~~~g~-~~~v~~L----l~~~~~~~~~---~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 75 (162)
T 1ihb_A 5 WGNELASAAARGD-LEQLTSL----LQNNVNVNAQ---NGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIH 75 (162)
T ss_dssp CHHHHHHHHHHTC-HHHHHHH----TTSCCCTTCC---CTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HhhHHHHHHHcCC-HHHHHHH----HhCCCCcccc---CccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 3456666666666 4444544 5678888887 8899999999999 9999999999999 54 478999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCcccHH
Q 010293 308 YAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGAC-ASETTSDGQTAVAICRRMTRRKDYI 386 (513)
Q Consensus 308 ~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~ 386 (513)
+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.++++
T Consensus 76 ~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~ 154 (162)
T 1ihb_A 76 DAARAGFLDTLQTLLEFQ-ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVS 154 (162)
T ss_dssp HHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 999999999999999998 99999999999999999999999999999999998 6999999999999999999999999
Q ss_pred HHHhcCCC
Q 010293 387 EATKQGQE 394 (513)
Q Consensus 387 ~l~~~g~~ 394 (513)
+|+++|++
T Consensus 155 ~Ll~~GAd 162 (162)
T 1ihb_A 155 LMQANGAG 162 (162)
T ss_dssp HHHHTC--
T ss_pred HHHHhCCC
Confidence 99999974
No 57
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=4.2e-27 Score=210.60 Aligned_cols=156 Identities=17% Similarity=0.144 Sum_probs=140.4
Q ss_pred CCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHH
Q 010293 231 LDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYAL 306 (513)
Q Consensus 231 ~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL 306 (513)
.+.|+++.|+..+. .++++.+ ++.|++++.. |..|.||||+|+..|+.+++++|+++| ++ +..|.|||
T Consensus 2 ~~~t~L~~A~~~g~-~~~v~~l----l~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 73 (167)
T 3v31_A 2 ANSLSVHQLAAQGE-MLYLATR----IEQENVINHT---DEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESAL 73 (167)
T ss_dssp TTCCCHHHHHHTTC-HHHHHHH----HHHSSCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCcchHHHHHHCCC-HHHHHHH----HHcCCCcCCC---CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 35677787777777 4444444 5667888887 899999999999999999999999999 54 57899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHH
Q 010293 307 HYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYI 386 (513)
Q Consensus 307 h~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~ 386 (513)
|+|+..|+.+++++|++++ ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (167)
T 3v31_A 74 SLACSKGYTDIVKMLLDCG-VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQ 152 (167)
T ss_dssp HHHHHHTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 9999999999999999998 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCc
Q 010293 387 EATKQGQET 395 (513)
Q Consensus 387 ~l~~~g~~~ 395 (513)
+|++++...
T Consensus 153 ~L~~~~~~~ 161 (167)
T 3v31_A 153 VIESHLLKL 161 (167)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987543
No 58
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=1.5e-27 Score=232.09 Aligned_cols=179 Identities=15% Similarity=0.100 Sum_probs=155.6
Q ss_pred hHHHHHHhcChHH----HHHHhhh--hhhccCCCcchhhhccChhhHHHHHHHHhhcchhhcc-CcccCCccccccchHH
Q 010293 205 PILVAAFHCQLNQ----LRSHCVQ--RVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEA-NIAEVDPMHAKRVRRI 277 (513)
Q Consensus 205 t~L~~A~~~~~~~----L~~~~~~--~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga-~~~~~~~~d~~g~tpL 277 (513)
+++|.|+..+... +++.+.+ ++.++..|.||++.|+..+. .+++++| +++|+ +++.. |..|.|||
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~-~~~v~~L----l~~g~~~~~~~---~~~g~tpL 149 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHAN-FPVVQQL----LDSGVCKVDKQ---NRAGYSPI 149 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTC-HHHHHHH----HHTSCCCTTCC---CTTSCCHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCC-HHHHHHH----HHCCCCcCCCC---CCCCCCHH
Confidence 3445555555433 4444444 55678899999999998888 5666766 67787 88887 99999999
Q ss_pred HHHH-----hcCCHHHHHHHHHcC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCC
Q 010293 278 HKAL-----DSDDVELLKLLLDES-N---VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKE 348 (513)
Q Consensus 278 h~A~-----~~g~~~~v~~Ll~~g-~---~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~ 348 (513)
|+|+ ..++.+++++|++.| . .+..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+
T Consensus 150 ~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-ad~n~~d~~G~TpLh~A~~~g~ 228 (276)
T 4hbd_A 150 MLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACE-ADVNVQDDDGSTALMCACEHGH 228 (276)
T ss_dssp HHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHCCC
Confidence 9999 678999999999999 3 3467999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcC
Q 010293 349 PAVLVTLLS-KGACASETTSDGQTAVAICRRMTRRKDYIEATKQG 392 (513)
Q Consensus 349 ~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g 392 (513)
.++|++|++ .|+|++.+|..|+||||+|+..|+.+++++|++++
T Consensus 229 ~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 229 KEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999999999 89999999999999999999999999999999875
No 59
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=3.5e-27 Score=212.17 Aligned_cols=159 Identities=16% Similarity=0.172 Sum_probs=137.5
Q ss_pred CcchhhhccChhhHHHHHHHHhhcchhhccC-cccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHH
Q 010293 232 DDVCLEKELPDEVSGEIKSLRVKSDEECEAN-IAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYAL 306 (513)
Q Consensus 232 ~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~-~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL 306 (513)
+.++++.++..+....+..++ ..|.+ ++.. |..|+||||+|+..|+.++|++|+++| ++ +..|+|||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll-----~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 73 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHL-----RKGDNLVNKP---DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESAL 73 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHH-----TTCSGGGGCC---CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHH
T ss_pred chhhHHHHHHcCCHHHHHHHH-----HcCcccccCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHH
Confidence 346677777777644444443 33444 5666 899999999999999999999999999 54 47899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHH
Q 010293 307 HYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYI 386 (513)
Q Consensus 307 h~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~ 386 (513)
|+|+..|+.+++++|++++ ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 74 SLASTGGYTDIVGLLLERD-VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp HHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHH
Confidence 9999999999999999998 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCccccc
Q 010293 387 EATKQGQETNKDR 399 (513)
Q Consensus 387 ~l~~~g~~~~~~~ 399 (513)
+|+++|.+....+
T Consensus 153 ~L~~~~~~~~~~~ 165 (172)
T 3v30_A 153 VIENHILKLFQSN 165 (172)
T ss_dssp HHHHHHHHHSCC-
T ss_pred HHHHHHHHHhccc
Confidence 9999987655433
No 60
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=5.2e-28 Score=232.61 Aligned_cols=205 Identities=16% Similarity=0.104 Sum_probs=155.9
Q ss_pred CCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCc-cccccchHHHHHH---hcCCHHHHHHHHHcC-CC------
Q 010293 230 NLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDP-MHAKRVRRIHKAL---DSDDVELLKLLLDES-NV------ 298 (513)
Q Consensus 230 ~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~-~d~~g~tpLh~A~---~~g~~~~v~~Ll~~g-~~------ 298 (513)
.++.++++.++..+....+..++ ..++.+|++++..+. .|..|+||||+|+ ..|+.++|++|++.| +.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll-~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLL-SFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHH-HHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred cchHHHHHHHHHhCCHHHHHHHH-HHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 34556666666555533322222 222667888887631 2477999999999 779999999999987 31
Q ss_pred --------CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCC--------------CCCchHHHHHHHcCCHHHHHHHH
Q 010293 299 --------TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKN--------------ARGHTVLHVAARRKEPAVLVTLL 356 (513)
Q Consensus 299 --------~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d--------------~~g~tpLh~A~~~g~~~~v~~Ll 356 (513)
|..|+||||+|+..|+.+++++|+++| +++|.++ ..|+||||+|+..|+.++|++|+
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 160 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKG-ADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT 160 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCC-CCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 238999999999999999999999998 9999999 68999999999999999999999
Q ss_pred h---CCCCCCCCCCCCCcHHHHHHHcCC---------cccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhh
Q 010293 357 S---KGACASETTSDGQTAVAICRRMTR---------RKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEV 424 (513)
Q Consensus 357 ~---~gad~~~~d~~g~tpL~~A~~~~~---------~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~ 424 (513)
+ +|++++.+|..|+||||+|+..++ .+++++|++.|++++.... ........|.++++.+.
T Consensus 161 ~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~-------~~~~~d~~g~tpL~~A~ 233 (260)
T 3jxi_A 161 ENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTN-------LEALLNNDGLSPLMMAA 233 (260)
T ss_dssp HCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCC-------GGGCCCTTSCCHHHHHH
T ss_pred hccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccc-------hhhcccCCCCCHHHHHH
Confidence 9 999999999999999999999887 5899999999876532110 00011123344444333
Q ss_pred hccccchhhhhhhhhhhhhhhccccccchh
Q 010293 425 MADDFQMKLNYLENRVAFARLLFPSEARVA 454 (513)
Q Consensus 425 ~~~~~~~~~l~l~~~~~~~~~l~~~~a~~~ 454 (513)
. .++.+++++|+++|++..
T Consensus 234 ~-----------~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 234 K-----------TGKIGIFQHIIRREIADA 252 (260)
T ss_dssp H-----------TTCHHHHHHHHHHHHHHH
T ss_pred H-----------cCCHHHHHHHHHhCCCcc
Confidence 2 346889999999988765
No 61
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=3.3e-27 Score=204.03 Aligned_cols=130 Identities=18% Similarity=0.116 Sum_probs=123.5
Q ss_pred ccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Q 010293 260 EANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNAR 335 (513)
Q Consensus 260 ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~ 335 (513)
+++++.+ |..|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+. |+.+++++|++++ ++++.+|..
T Consensus 2 ~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~ 76 (136)
T 1d9s_A 2 SPGIHML---GGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHG-AEPNCADPA 76 (136)
T ss_dssp CCCCSCC---CCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHT-CCSSCCBTT
T ss_pred CCCccCC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCC-CCCCCcCCC
Confidence 4677777 899999999999999999999999999 54 4789999999999 9999999999998 999999999
Q ss_pred -CchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCC
Q 010293 336 -GHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQE 394 (513)
Q Consensus 336 -g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~ 394 (513)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999874
No 62
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=2.4e-26 Score=202.74 Aligned_cols=145 Identities=20% Similarity=0.123 Sum_probs=127.9
Q ss_pred chhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHH
Q 010293 234 VCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYA 309 (513)
Q Consensus 234 t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A 309 (513)
++++.++..+. .++++.+ +++|++++ . +..|.||||+|+..|+.+++++|++.| ++ +..|+||||+|
T Consensus 4 ~~L~~A~~~g~-~~~v~~L----l~~g~~~~-~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 74 (153)
T 1awc_B 4 KKLLEAARAGQ-DDEVRIL----MANGAPFT-T---DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMA 74 (153)
T ss_dssp HHHHHHHHHTC-HHHHHHH----HHHTCCCC-C---CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHH
T ss_pred HHHHHHHHcCC-HHHHHHH----HHcCCCCC-c---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 45555665565 3344444 55677665 3 788999999999999999999999999 54 47899999999
Q ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHH
Q 010293 310 AAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEA 388 (513)
Q Consensus 310 ~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l 388 (513)
+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 75 ~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 75 ASEGHANIVEVLLKHG-ADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHcChHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999997 99999999999999999999999999999999999999999999999999999999999876
No 63
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=3.8e-26 Score=203.95 Aligned_cols=155 Identities=23% Similarity=0.240 Sum_probs=133.9
Q ss_pred ccccchHHHHHHhcCCHHHHHHHHHcC-----CCCCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHH
Q 010293 270 HAKRVRRIHKALDSDDVELLKLLLDES-----NVTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAA 344 (513)
Q Consensus 270 d~~g~tpLh~A~~~g~~~~v~~Ll~~g-----~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~ 344 (513)
|..|.||||.|+..|+.++++.|++.+ ..+..|+||||+|+..|+.+++++|++++ ++++.+|..|+||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG-ADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcC-CCCCccCCCCCCHHHHHH
Confidence 788999999999999999999999966 33577899999999999999999999998 999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhh
Q 010293 345 RRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEV 424 (513)
Q Consensus 345 ~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~ 424 (513)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++..+ ..|.+++..+
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~--------------~~g~t~l~~a- 148 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKN--------------RDGNTPLDLV- 148 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--------------TTSCCTGGGS-
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC--------------CCCCChhHhH-
Confidence 9999999999999999999999999999999999999999999999999876544 2344444332
Q ss_pred hccccchhhhhhhhhhhhhhhcccccc
Q 010293 425 MADDFQMKLNYLENRVAFARLLFPSEA 451 (513)
Q Consensus 425 ~~~~~~~~~l~l~~~~~~~~~l~~~~a 451 (513)
. +++.+++++|+++||
T Consensus 149 -~----------~~~~~i~~~L~~~gA 164 (165)
T 3twr_A 149 -K----------DGDTDIQDLLRGDAA 164 (165)
T ss_dssp -C----------TTCHHHHHHHHTC--
T ss_pred -h----------cCChHHHHHHhhccc
Confidence 1 235688888888775
No 64
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=1.7e-26 Score=209.32 Aligned_cols=159 Identities=19% Similarity=0.205 Sum_probs=138.9
Q ss_pred CCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHH
Q 010293 231 LDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYAL 306 (513)
Q Consensus 231 ~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL 306 (513)
.+.++++.++..+....+..++ -..+.+++.. |..|+||||+|+..|+.+++++|+++| ++ |..|+|||
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll----~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 76 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWL----DNTENDLNQG---DDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPL 76 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHH----HCTTSCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHH----hcCccccccc---CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 3456677777777744444443 1225567776 899999999999999999999999999 55 47899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHH
Q 010293 307 HYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYI 386 (513)
Q Consensus 307 h~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~ 386 (513)
|+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.++++
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~ 155 (179)
T 3f6q_A 77 HLAASHGHRDIVQKLLQYK-ADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRE 155 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999998 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCccc
Q 010293 387 EATKQGQETNK 397 (513)
Q Consensus 387 ~l~~~g~~~~~ 397 (513)
.|++.|++++.
T Consensus 156 ~L~~~g~~~~~ 166 (179)
T 3f6q_A 156 RAEKMGQNLNR 166 (179)
T ss_dssp HHHHTTCCCSC
T ss_pred HHHHhhcCccc
Confidence 99999998764
No 65
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.3e-26 Score=206.98 Aligned_cols=154 Identities=20% Similarity=0.221 Sum_probs=129.6
Q ss_pred CCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHH
Q 010293 231 LDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYAL 306 (513)
Q Consensus 231 ~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL 306 (513)
.+.++++.++..+....+..++ -..+.+++.. +..|+||||+|+..|+.+++++|+++| ++ |..|+|||
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll----~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 79 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLC----TVQSVNCRDI---EGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPL 79 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHC----CTTTTTCCCT---TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred hhhHHHHHHHHhCCHHHHHHHH----HcCCCCcccc---ccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHH
Confidence 3445555555555533333333 1123455555 888999999999999999999999999 54 57899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHH
Q 010293 307 HYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYI 386 (513)
Q Consensus 307 h~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~ 386 (513)
|+|+..|+.+++++|++++ +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. |+.++++
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~ 157 (165)
T 3twr_A 80 HNACSYGHYEVAELLVKHG-AVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQD 157 (165)
T ss_dssp HHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHH
T ss_pred HHHHHcCcHHHHHHHHhCC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHH
Confidence 9999999999999999998 9999999999999999999999999999999999999999999999999877 8999999
Q ss_pred HHHhcCC
Q 010293 387 EATKQGQ 393 (513)
Q Consensus 387 ~l~~~g~ 393 (513)
+|.+.|+
T Consensus 158 ~L~~~gA 164 (165)
T 3twr_A 158 LLRGDAA 164 (165)
T ss_dssp HHHTC--
T ss_pred HHhhccc
Confidence 9999885
No 66
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=4.4e-26 Score=208.92 Aligned_cols=129 Identities=16% Similarity=0.184 Sum_probs=123.0
Q ss_pred ccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHH
Q 010293 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAAR 345 (513)
Q Consensus 270 d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~ 345 (513)
|..|+||||+|+..|+.+++++|++.| ++ +..|+||||+|+..|+.+++++|++++ ++++.+|..|+||||+|+.
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~ 110 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKG-SNVNTKDFSGKTPLMWSII 110 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHH
Confidence 899999999999999999999999998 44 478999999999999999999999998 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCccccc
Q 010293 346 RKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDR 399 (513)
Q Consensus 346 ~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~ 399 (513)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+++...+
T Consensus 111 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 164 (192)
T 2rfm_A 111 FGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARD 164 (192)
T ss_dssp HTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 999999999999999999999999999999999999999999999999876544
No 67
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=5.2e-26 Score=204.50 Aligned_cols=156 Identities=16% Similarity=0.143 Sum_probs=137.0
Q ss_pred cchHHHHHHhcCCHHHHHHHHHcC-C----CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcC
Q 010293 273 RVRRIHKALDSDDVELLKLLLDES-N----VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRK 347 (513)
Q Consensus 273 g~tpLh~A~~~g~~~~v~~Ll~~g-~----~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g 347 (513)
+.||||.|+..|+.++++.|++.| . .+..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWG-ADPHILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCchhhcccCCCHHHHHHHCC
Confidence 568999999999999999999998 2 3688999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhcc
Q 010293 348 EPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMAD 427 (513)
Q Consensus 348 ~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~ 427 (513)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+++...+ ..|.+++..+..
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~--------------~~g~t~l~~A~~-- 144 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEA--------------DSGYTPMDLAVA-- 144 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--------------TTSCCHHHHHHH--
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC--------------CCCCCHHHHHHH--
Confidence 9999999999999999999999999999999999999999999998776544 234444444433
Q ss_pred ccchhhhhhhhhhhhhhhccccccchh
Q 010293 428 DFQMKLNYLENRVAFARLLFPSEARVA 454 (513)
Q Consensus 428 ~~~~~~l~l~~~~~~~~~l~~~~a~~~ 454 (513)
.++.+++++|+++++++.
T Consensus 145 ---------~~~~~~~~~L~~~~~~~~ 162 (172)
T 3v30_A 145 ---------LGYRKVQQVIENHILKLF 162 (172)
T ss_dssp ---------HTCHHHHHHHHHHHHHHS
T ss_pred ---------hCcHHHHHHHHHHHHHHh
Confidence 345788899988888776
No 68
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=1.2e-26 Score=231.34 Aligned_cols=190 Identities=17% Similarity=0.116 Sum_probs=152.5
Q ss_pred HHHHHHHhcChHHHHHHHHHhccchhh-hcccCCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhh
Q 010293 170 ELMYASAAFQMKELVLLFQRRLLNFVE-KALVEDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEV 244 (513)
Q Consensus 170 ~lL~~A~~~~~~~L~~~~~~~l~~~~~-k~~~~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~ 244 (513)
..+++|....+.++++++.+.+.+++. ++ .++.||||+|+..+..+ |++.+++++.++..|.||+|.|+..+.
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d--~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLNIPVD--EHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSCSCCS--TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSH
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCcccccC--CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcc
Confidence 345666777778899999999998887 54 45589999999999844 788889999999999999999887543
Q ss_pred ------HHHHHHHHhhcchhhccCcccCCccccccchHHHHHHh----cCCHHHHHHHHHc-------------------
Q 010293 245 ------SGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALD----SDDVELLKLLLDE------------------- 295 (513)
Q Consensus 245 ------~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~----~g~~~~v~~Ll~~------------------- 295 (513)
+..+++.+ +++++.+ |..|+||||+|+. .|+.+++++|++.
T Consensus 177 ~~~~~~~~~ll~~~-------~~~~~~~---d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~ 246 (327)
T 1sw6_A 177 NYDSGTFEALLDYL-------YPCLILE---DSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNE 246 (327)
T ss_dssp HHHTTCHHHHHHHH-------GGGGGEE---CTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---
T ss_pred cccHHHHHHHHHhh-------hccccCC---CCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhc
Confidence 34444433 2577777 9999999999999 9999999999987
Q ss_pred -C-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Q 010293 296 -S-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQ 370 (513)
Q Consensus 296 -g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~ 370 (513)
| ++ +..|+||||+|+. +++|+.+ ++|.+|..|+||||+|+..|+.++|++|+++|||++.+|..|+
T Consensus 247 ~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~ 317 (327)
T 1sw6_A 247 KESKPNDKNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGL 317 (327)
T ss_dssp -------------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ccCCcccccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence 5 33 4789999999985 8888887 5999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHcC
Q 010293 371 TAVAICRRMT 380 (513)
Q Consensus 371 tpL~~A~~~~ 380 (513)
||||+|+++|
T Consensus 318 TpL~~A~~~g 327 (327)
T 1sw6_A 318 RPVDFGAGLE 327 (327)
T ss_dssp CGGGGTCC--
T ss_pred CHHHHHHhcC
Confidence 9999998765
No 69
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=2.2e-25 Score=199.35 Aligned_cols=156 Identities=16% Similarity=0.151 Sum_probs=136.3
Q ss_pred ccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcC
Q 010293 272 KRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRK 347 (513)
Q Consensus 272 ~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g 347 (513)
.|.||||.|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|++++ ++++.+|..|+||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNG-ADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcC
Confidence 5889999999999999999999999 44 578999999999999999999999997 999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhcc
Q 010293 348 EPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMAD 427 (513)
Q Consensus 348 ~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~ 427 (513)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+++...+ ..|.+++..+...+
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--------------~~g~t~l~~A~~~~ 146 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIET--------------DSGYNSMDLAVALG 146 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--------------TTSCCHHHHHHHHT
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC--------------CCCCCHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999775544 23444555444433
Q ss_pred ccchhhhhhhhhhhhhhhccccccch
Q 010293 428 DFQMKLNYLENRVAFARLLFPSEARV 453 (513)
Q Consensus 428 ~~~~~~l~l~~~~~~~~~l~~~~a~~ 453 (513)
+.+++++|++++++.
T Consensus 147 -----------~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 147 -----------YRSVQQVIESHLLKL 161 (167)
T ss_dssp -----------CHHHHHHHHHHHHHH
T ss_pred -----------cHHHHHHHHHHHHHH
Confidence 466777777666554
No 70
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.93 E-value=1.3e-25 Score=199.71 Aligned_cols=155 Identities=23% Similarity=0.215 Sum_probs=133.1
Q ss_pred cccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHc
Q 010293 271 AKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARR 346 (513)
Q Consensus 271 ~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~ 346 (513)
....||||.|+..|+.+++++|+++| ++ |..|+||||+|+. |+.+++++|+++| ++++.+|..|+||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRG-ANPDLKDRTGFAVIHDAARA 80 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHc
Confidence 45679999999999999999999999 54 4789999999999 9999999999998 99999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCc-ccccchHHHHHHHHhcccCCCCcccchhhh
Q 010293 347 KEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQET-NKDRLCIDVLEREMRRNSMSGNLALSSEVM 425 (513)
Q Consensus 347 g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~-~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~ 425 (513)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|.++ ...+ ..|.+++..+..
T Consensus 81 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~--------------~~g~t~l~~A~~ 146 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRN--------------HKGDTACDLARL 146 (162)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCC--------------TTSCCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcC--------------CCCCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999864 2222 234444444432
Q ss_pred ccccchhhhhhhhhhhhhhhccccccc
Q 010293 426 ADDFQMKLNYLENRVAFARLLFPSEAR 452 (513)
Q Consensus 426 ~~~~~~~~l~l~~~~~~~~~l~~~~a~ 452 (513)
.++.+++++|+++||+
T Consensus 147 -----------~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 147 -----------YGRNEVVSLMQANGAG 162 (162)
T ss_dssp -----------TTCHHHHHHHHHTC--
T ss_pred -----------cCCHHHHHHHHHhCCC
Confidence 3468899999999875
No 71
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=2.1e-25 Score=197.06 Aligned_cols=148 Identities=14% Similarity=0.111 Sum_probs=129.8
Q ss_pred cchhhhccChhhHHHHHHHHhhcchhh-ccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHH
Q 010293 233 DVCLEKELPDEVSGEIKSLRVKSDEEC-EANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALH 307 (513)
Q Consensus 233 ~t~l~~a~~~~~~~~i~~ll~~~~l~~-ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh 307 (513)
.++++.|+..+....+..++ ++ +.+++.. |..|+||||+ +..|+.+++++|+++| ++ |..|+||||
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll-----~~~~~~~~~~---~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 73 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLL-----HRELVHPDAL---NRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVH 73 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHH-----HTTCCCTTCC---CTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred chHHHHHHHhCCHHHHHHHH-----HhhCcCcccc---CCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 35566666666644443333 22 3477777 8899999999 9999999999999999 54 478999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHH
Q 010293 308 YAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIE 387 (513)
Q Consensus 308 ~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~ 387 (513)
+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++ ++++.+|..|+||||+|+..|+.+++++
T Consensus 74 ~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~ 151 (156)
T 1bd8_A 74 DAARTGFLDTLKVLVEHG-ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDI 151 (156)
T ss_dssp HHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHH
T ss_pred HHHHcCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 999999999999999998 99999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHhc
Q 010293 388 ATKQ 391 (513)
Q Consensus 388 l~~~ 391 (513)
|+++
T Consensus 152 Ll~~ 155 (156)
T 1bd8_A 152 LQGH 155 (156)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 9864
No 72
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=3.3e-25 Score=200.76 Aligned_cols=158 Identities=15% Similarity=0.151 Sum_probs=137.0
Q ss_pred cccchHHHHHHhcCCHHHHHHHHHcC--CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHH
Q 010293 271 AKRVRRIHKALDSDDVELLKLLLDES--NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAAR 345 (513)
Q Consensus 271 ~~g~tpLh~A~~~g~~~~v~~Ll~~g--~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~ 345 (513)
..+.+|||.|+..|+.++|++|++.+ ++ +..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRG-ARINVMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHH
Confidence 46789999999999999999999996 33 578999999999999999999999998 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhh
Q 010293 346 RKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVM 425 (513)
Q Consensus 346 ~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~ 425 (513)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+++...+ ..|.+++..+..
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~--------------~~g~tpl~~A~~ 147 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICN--------------KYGEMPVDKAKA 147 (179)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCC--------------TTSCCGGGGSCH
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhc--------------cCCCCcHHHHHH
Confidence 999999999999999999999999999999999999999999999999876544 234444433322
Q ss_pred ccccchhhhhhhhhhhhhhhccccccchh
Q 010293 426 ADDFQMKLNYLENRVAFARLLFPSEARVA 454 (513)
Q Consensus 426 ~~~~~~~~l~l~~~~~~~~~l~~~~a~~~ 454 (513)
.++.+++++|+++|++++
T Consensus 148 -----------~~~~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 148 -----------PLRELLRERAEKMGQNLN 165 (179)
T ss_dssp -----------HHHHHHHHHHHHTTCCCS
T ss_pred -----------HHHHHHHHHHHHhhcCcc
Confidence 456788999999999886
No 73
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=4.2e-25 Score=198.14 Aligned_cols=129 Identities=20% Similarity=0.250 Sum_probs=120.7
Q ss_pred ccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHH
Q 010293 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAAR 345 (513)
Q Consensus 270 d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~ 345 (513)
...+.||||+|++.|+.++|++|+++| ++ |..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNG-ADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHH
Confidence 567889999999999999999999999 54 478999999999999999999999998 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCccccc
Q 010293 346 RKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDR 399 (513)
Q Consensus 346 ~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~ 399 (513)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+++...+
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 143 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQD 143 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 999999999999999999999999999999999999999999999998775443
No 74
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=3.1e-25 Score=191.56 Aligned_cols=122 Identities=22% Similarity=0.193 Sum_probs=115.9
Q ss_pred ccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHH
Q 010293 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAAR 345 (513)
Q Consensus 270 d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~ 345 (513)
...|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|+++| +++|.+|..|+||||+|+.
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNG-ADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHH
Confidence 677999999999999999999999999 54 477999999999999999999999998 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcC
Q 010293 346 RKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQG 392 (513)
Q Consensus 346 ~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g 392 (513)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999876
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=4.9e-25 Score=194.24 Aligned_cols=126 Identities=17% Similarity=0.200 Sum_probs=119.2
Q ss_pred cchHHHHHHhcCCHHHHHHHHHcC-C--CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCH
Q 010293 273 RVRRIHKALDSDDVELLKLLLDES-N--VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEP 349 (513)
Q Consensus 273 g~tpLh~A~~~g~~~~v~~Ll~~g-~--~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~ 349 (513)
..||||.|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++++|++.+ ++++.+|..|+||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAG-VSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcChH
Confidence 468999999999999999999999 3 4578999999999999999999999988 99999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCccccc
Q 010293 350 AVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDR 399 (513)
Q Consensus 350 ~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~ 399 (513)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++..+
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 130 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQS 130 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC
Confidence 99999999999999999999999999999999999999999999876443
No 76
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=8.2e-26 Score=214.86 Aligned_cols=162 Identities=12% Similarity=0.045 Sum_probs=100.1
Q ss_pred ccccchHHHHHHhcCCHHHHHHHHHcC-CCC--CCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHc
Q 010293 270 HAKRVRRIHKALDSDDVELLKLLLDES-NVT--LDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARR 346 (513)
Q Consensus 270 d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~~--~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~ 346 (513)
+..|.||||.|+..|+.++++.|+++| +++ ..|.||||+|+..|+.++++.|++.+ +++|.+|..|+||||+|+..
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEV-DDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTT-SSCCCCCTTSCCHHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHc
Confidence 456888888888888888888888888 444 66788888888888888888888887 88888888888889888888
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhc
Q 010293 347 KEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMA 426 (513)
Q Consensus 347 g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~ 426 (513)
|+.+++++|+++|+|+|.+|..|+||||+|+..|+.+++++|++.|++++..+ ...+.++++.+...
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~-------------~~~~~t~l~~a~~~ 147 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT-------------YSDMQTAADKCEEM 147 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-------------SSSCCCHHHHCCSS
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceec-------------CCCCcchHHHHHHh
Confidence 88888888888888888888888889988888888888888888888765443 01112333322111
Q ss_pred cccchhhhhhhhhhhhhhhccccccchh
Q 010293 427 DDFQMKLNYLENRVAFARLLFPSEARVA 454 (513)
Q Consensus 427 ~~~~~~~l~l~~~~~~~~~l~~~~a~~~ 454 (513)
. +++.+++++|+.+|+++.
T Consensus 148 ~---------~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 148 E---------EGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp S---------TTCCCHHHHHHHHHHHTT
T ss_pred h---------hccHHHHHHHHHhhhccc
Confidence 1 345777777777777765
No 77
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=8.7e-26 Score=199.90 Aligned_cols=128 Identities=20% Similarity=0.145 Sum_probs=115.8
Q ss_pred ccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCch-HHHHHH
Q 010293 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHT-VLHVAA 344 (513)
Q Consensus 270 d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~t-pLh~A~ 344 (513)
+..|.||||+|+..|+.++|++|+++| ++ |..|+||||+|+ .|+.+++++|+++| +++|.+|..|+| |||+|+
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g-~~~~~~d~~g~ttpL~~A~ 86 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG-AEPNCADPATLTRPVHDAA 86 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT-CCCCCCCTTTCCCHHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHH
Confidence 788999999999999999999999999 54 478999999985 89999999999998 999999999999 999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCccccc
Q 010293 345 RRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDR 399 (513)
Q Consensus 345 ~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~ 399 (513)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++...+
T Consensus 87 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~ 141 (156)
T 1bi7_B 87 REGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSN 141 (156)
T ss_dssp HHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-------
T ss_pred HCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccC
Confidence 9999999999999999999999999999999999999999999999999886544
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=1.1e-25 Score=214.06 Aligned_cols=158 Identities=17% Similarity=0.136 Sum_probs=117.5
Q ss_pred CCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccH
Q 010293 230 NLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYA 305 (513)
Q Consensus 230 ~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tp 305 (513)
..|.|+++.+...+. .++++.+ +++|++++. +..|.||||.|+..|+.++|++|++.| ++ |..|+||
T Consensus 3 ~~g~t~L~~a~~~~~-~~~~~~l----l~~g~~~~~----~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~ 73 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNL-RKTGSER----IAHGMRVKF----NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITA 73 (239)
T ss_dssp -------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCH
T ss_pred ccccccCchhhhhhh-HHHHHHH----hccCCCccc----CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 357888888888777 4555555 788999884 467999999999999999999999999 55 4789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC-cHHHHH--HHcCCc
Q 010293 306 LHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQ-TAVAIC--RRMTRR 382 (513)
Q Consensus 306 Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~-tpL~~A--~~~~~~ 382 (513)
||+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+++|+|++.++..|. ||||+| +..|+.
T Consensus 74 L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~ 152 (239)
T 1ycs_B 74 LHNAVCAGHTEIVKFLVQFG-VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYT 152 (239)
T ss_dssp HHHHHHHTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCC
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccH
Confidence 99999999999999999998 99999999999999999999999999999999999999998887 999999 888999
Q ss_pred ccHHHHHhcCCCccc
Q 010293 383 KDYIEATKQGQETNK 397 (513)
Q Consensus 383 ~~v~~l~~~g~~~~~ 397 (513)
+++++|++.|+++..
T Consensus 153 ~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 153 QCSQFLYGVQEKMGI 167 (239)
T ss_dssp CHHHHHHHHHHHTTT
T ss_pred HHHHHHHHhhhcccc
Confidence 999999999886654
No 79
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.92 E-value=8e-25 Score=212.70 Aligned_cols=182 Identities=15% Similarity=0.139 Sum_probs=148.6
Q ss_pred chhhhccChhhHHHHHHHHhhcchhhccC--cccCCccccccchHHHHHHhcCCHHHHHHHHHcC--CC---CCCCccHH
Q 010293 234 VCLEKELPDEVSGEIKSLRVKSDEECEAN--IAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES--NV---TLDDAYAL 306 (513)
Q Consensus 234 t~l~~a~~~~~~~~i~~ll~~~~l~~ga~--~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g--~~---~~~g~tpL 306 (513)
++++.++..+.+..+..++ ..+.+ +|.. |.+|+||||+|+..|+.++|++|++.| ++ |..|+|||
T Consensus 78 ~~l~~a~~~~~~~~~~~l~-----~~~~~~~~n~~---d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL 149 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMS-----ARLLDYVVNIA---DSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPI 149 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHC-----HHHHHHHHTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHH
T ss_pred cCCCHHHHHHHHHHHHHHH-----HHHHhhcCcCC---CCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHH
Confidence 4555565555544444333 22233 6666 999999999999999999999999999 33 47899999
Q ss_pred HHHH-----HcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q 010293 307 HYAA-----AYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTR 381 (513)
Q Consensus 307 h~A~-----~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~ 381 (513)
|+|+ ..++.++++.|+..| ++++..|..|+||||+|+..|+.++|++|+++|+|+|.+|..|+||||+|+..|+
T Consensus 150 ~~a~~~~~~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~ 228 (276)
T 4hbd_A 150 MLTALATLKTQDDIETVLQLFRLG-NINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGH 228 (276)
T ss_dssp HHGGGCCCCSHHHHHHHHHHHHHS-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHhhhhhhHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCC
Confidence 9999 668899999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHh-cCCCcccccchHHHHHHHHhcccCCCCcccchhhhccccchhhhhhhhhhhhhhhcccc
Q 010293 382 RKDYIEATK-QGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPS 449 (513)
Q Consensus 382 ~~~v~~l~~-~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~l~~~ 449 (513)
.+++++|++ .|++++..+ ..|.+++..++.. ++.+++++|+++
T Consensus 229 ~~iv~~Ll~~~gad~~~~d--------------~~g~TpL~~A~~~-----------g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 229 KEIAGLLLAVPSCDISLTD--------------RDGSTALMVALDA-----------GQSEIASMLYSR 272 (276)
T ss_dssp HHHHHHHHTSTTCCTTCCC--------------TTSCCHHHHHHHH-----------TCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCcCcC--------------CCCCCHHHHHHHc-----------CCHHHHHHHHhc
Confidence 999999999 888776544 3455555555443 346777777654
No 80
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.92 E-value=3.4e-25 Score=199.57 Aligned_cols=152 Identities=24% Similarity=0.393 Sum_probs=136.4
Q ss_pred CChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcc
Q 010293 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKV 124 (513)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i 124 (513)
.|++.+..++.++++++ .+|||+|+++|++|+|||.||+++|+||++||.++|.|+ ....|.++++
T Consensus 16 ~p~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~------~~~~i~l~~~------ 81 (172)
T 3htm_A 16 VPECRLADELGGLWENS--RFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES------KKNRVEINDV------ 81 (172)
T ss_dssp CCCCCHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGG------GTTEEEECSS------
T ss_pred CCHHHHHHHHHHHHhCC--CCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCcccc------CCCeEEecCC------
Confidence 46678999999999999 999999999999999999999999999999999999988 7789999885
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhccchhhhcccCCch
Q 010293 125 GYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVI 204 (513)
Q Consensus 125 ~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~ 204 (513)
++++|+.+|+|+|||++.+.. +.+.+++.+|.+|+++.+++.|.+++....+ ..|+.
T Consensus 82 ~~~~f~~~l~~~Yt~~~~~~~--------------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~---~~n~~ 138 (172)
T 3htm_A 82 EPEVFKEMMCFIYTGKAPNLD--------------------KMADDLLAAADKYALERLKVMCEDALCSNLS---VENAA 138 (172)
T ss_dssp CHHHHHHHHHHHHHSCCTTGG--------------------GTHHHHHHHHHHTTCHHHHHHHHHHHHHTCC---TTTHH
T ss_pred CHHHHHHHHHHHhCCCCCCcH--------------------HHHHHHHHHHHHhCcHHHHHHHHHHHHHhCC---HHHHH
Confidence 455999999999999987654 3468999999999999999999999987666 78999
Q ss_pred hHHHHHHhcChHHHHHHhhhhhhccCCCc
Q 010293 205 PILVAAFHCQLNQLRSHCVQRVVRSNLDD 233 (513)
Q Consensus 205 t~L~~A~~~~~~~L~~~~~~~~~~~~~~~ 233 (513)
.++.+|..++..+|.+.|.+++.++....
T Consensus 139 ~~~~~A~~~~~~~L~~~~~~~i~~~~~~v 167 (172)
T 3htm_A 139 EILILADLHSADQLKTQAVDFINYHATDV 167 (172)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998876554
No 81
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=1.2e-24 Score=184.32 Aligned_cols=122 Identities=30% Similarity=0.371 Sum_probs=117.2
Q ss_pred ccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcC
Q 010293 272 KRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRK 347 (513)
Q Consensus 272 ~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g 347 (513)
+|+||||+|+..|+.+++++|+++| ++ +..|.||||+|+..|+.+++++|++.+ ++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcC
Confidence 5899999999999999999999999 44 578999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCC
Q 010293 348 EPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQE 394 (513)
Q Consensus 348 ~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~ 394 (513)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999974
No 82
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=9.9e-26 Score=194.86 Aligned_cols=129 Identities=19% Similarity=0.146 Sum_probs=114.5
Q ss_pred ccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Q 010293 260 EANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNAR 335 (513)
Q Consensus 260 ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~ 335 (513)
|+|+ .+ |.+|+||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|++++ ++++.+|..
T Consensus 1 G~d~-~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~ 75 (137)
T 3c5r_A 1 GIDP-FT---NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK-ALVNTTGYQ 75 (137)
T ss_dssp ---C-CC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCGG
T ss_pred CCCC-Cc---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CcccCcCCC
Confidence 5666 44 899999999999999999999999999 54 478999999999999999999999998 999999999
Q ss_pred CchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCC
Q 010293 336 GHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQ 393 (513)
Q Consensus 336 g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~ 393 (513)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++.++.+.+.
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999999999999999999999999999999999888888877776654
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=1.8e-25 Score=203.98 Aligned_cols=149 Identities=11% Similarity=0.045 Sum_probs=126.4
Q ss_pred chhhhccChhhHHHHHHHHhhcchhhccCcccCCccc-cccchHHHHHHhcCCH----HHHHHHHHcC-CCC---CCCcc
Q 010293 234 VCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMH-AKRVRRIHKALDSDDV----ELLKLLLDES-NVT---LDDAY 304 (513)
Q Consensus 234 t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d-~~g~tpLh~A~~~g~~----~~v~~Ll~~g-~~~---~~g~t 304 (513)
++++.++..+.+..+..++ . .+++.+ + ..|+||||+|+..|+. +++++|+++| ++| ..|+|
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~-----~--~~~~~~---~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~T 77 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELF-----E--KGYEDK---ESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTT 77 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHH-----H--HSSSCH---HHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCC
T ss_pred cHHHHHHHcCCHHHHHHHH-----h--cCcccc---cccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCc
Confidence 4566666666666655544 2 245544 5 7899999999999975 5999999999 654 78999
Q ss_pred HHHHHHHcCC------HHHHHHHHHcCCCCcccCCCCCc-hHHHHHHHcC-----CHHHHHHHHh-CCCCCCCCCCCCCc
Q 010293 305 ALHYAAAYCN------PKVFKEVLNMGLADLNLKNARGH-TVLHVAARRK-----EPAVLVTLLS-KGACASETTSDGQT 371 (513)
Q Consensus 305 pLh~A~~~g~------~~~v~~Ll~~~~advn~~d~~g~-tpLh~A~~~g-----~~~~v~~Ll~-~gad~~~~d~~g~t 371 (513)
|||+|+..|+ .+++++|+++| +|+|.+|..|+ ||||+|+..+ +.+++++|++ +|+|++.+|..|+|
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~G-adin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~T 156 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEKG-ADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLT 156 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHTT-CCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHCC-CCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCC
Confidence 9999999987 57899999998 99999999999 9999999954 4569999999 99999999999999
Q ss_pred HHHHHHHcCCcccHHHHHhcCC
Q 010293 372 AVAICRRMTRRKDYIEATKQGQ 393 (513)
Q Consensus 372 pL~~A~~~~~~~~v~~l~~~g~ 393 (513)
|||+|++.|+.+++++|.+...
T Consensus 157 pL~~A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 157 ALEFVKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHH
Confidence 9999999999999999987643
No 84
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.91 E-value=8.6e-24 Score=186.63 Aligned_cols=123 Identities=19% Similarity=0.208 Sum_probs=115.0
Q ss_pred cchHHHHHHhcCCHHHHHHHHHcC--CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcC
Q 010293 273 RVRRIHKALDSDDVELLKLLLDES--NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRK 347 (513)
Q Consensus 273 g~tpLh~A~~~g~~~~v~~Ll~~g--~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g 347 (513)
+.||||.|+..|+.+++++|++.+ ++ |..|+||||+ +..|+.+++++|+++| ++++.+|..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQG-ASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcC
Confidence 679999999999999999999985 43 5789999999 9999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcccc
Q 010293 348 EPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKD 398 (513)
Q Consensus 348 ~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~ 398 (513)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++. .++...
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~ 129 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRR 129 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCC
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCc
Confidence 99999999999999999999999999999999999999999988 655443
No 85
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.91 E-value=2.4e-24 Score=206.88 Aligned_cols=169 Identities=19% Similarity=0.274 Sum_probs=135.8
Q ss_pred ccCChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCC--CCCCCcCCCCCeEEeccccC
Q 010293 43 DNLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGND--NDGSAVSEGKPKYLMTELVP 120 (513)
Q Consensus 43 ~~~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~--e~~~~~~~~~~~i~l~~~~~ 120 (513)
+..+++.+.++|.++++++ .+|||+|+|+|++|+|||+||+++|+||++||.+++. |+ ...+|.++++
T Consensus 11 ~~~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~------~~~~i~l~~v-- 80 (256)
T 3hve_A 11 DPQHAARLLRALSSFREES--RFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDG------STYKIELEGI-- 80 (256)
T ss_dssp CTTTHHHHHHHHHTCCC----CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------------CEEECSSC--
T ss_pred ChHHHHHHHHHHHHHHhcC--CCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccC------CCCeEEeCCC--
Confidence 4568889999999999999 9999999999999999999999999999999999887 45 6678999885
Q ss_pred CCcccHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhccchhhhccc
Q 010293 121 YGKVGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVEKALV 200 (513)
Q Consensus 121 ~~~i~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~ 200 (513)
++++|+.+|+|+|||++.+...+ +.+++.+|.+|+++.+++.|.+++....+ .
T Consensus 81 ----~~~~f~~ll~~~Yt~~~~i~~~~--------------------v~~ll~~A~~l~i~~l~~~c~~~L~~~l~---~ 133 (256)
T 3hve_A 81 ----SVMVMREILDYIFSGQIRLNEDT--------------------IQDVVQAADLLLLTDLKTLCCEFLEGCIA---A 133 (256)
T ss_dssp ----CHHHHHHHHHHHHHSCCCCC-CC--------------------HHHHHHHHHHHTCHHHHHHHHHHHHHTCC---S
T ss_pred ----CHHHHHHHHhhccCCCCcccHhH--------------------HHHHHHHHHHHChHHHHHHHHHHHHhhCC---H
Confidence 55599999999999999887644 58999999999999999999999988777 7
Q ss_pred CCchhHHHHHHhcChHHHHHHhhhhhhccCCCcchhh--hccChhhHHHH
Q 010293 201 EDVIPILVAAFHCQLNQLRSHCVQRVVRSNLDDVCLE--KELPDEVSGEI 248 (513)
Q Consensus 201 ~n~~t~L~~A~~~~~~~L~~~~~~~~~~~~~~~t~l~--~a~~~~~~~~i 248 (513)
+|+..++.+|..++...|.+.|.+++.+++....... ..++.+.+..+
T Consensus 134 ~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~l 183 (256)
T 3hve_A 134 ENCIGIRDFALHYCLHHVHYLATEYLETHFRDVSSTEEFLELSPQKLKEV 183 (256)
T ss_dssp STTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTCHHHHSSCHHHHHHH
T ss_pred hhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhCCcchhcCCHHHHHHH
Confidence 8999999999999999999999999987765443222 44444443333
No 86
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.90 E-value=1.4e-24 Score=189.80 Aligned_cols=138 Identities=25% Similarity=0.424 Sum_probs=101.9
Q ss_pred CChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcc
Q 010293 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKV 124 (513)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i 124 (513)
.|++++.+++.++++++ .+|||+|+++|++|+|||.||++||+||++||.++|.|+ ....|.++++
T Consensus 7 ~p~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~------~~~~i~l~~~------ 72 (145)
T 4eoz_A 7 VPECRLADELGGLWENS--RFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES------KKNRVEINDV------ 72 (145)
T ss_dssp CCCCCHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHH------HHTEEEECSS------
T ss_pred CChHHHHHHHHHHHhCC--CCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCC------CCceEEecCC------
Confidence 45678999999999999 999999999999999999999999999999999999887 6678999885
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhccchhhhcccCCch
Q 010293 125 GYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVI 204 (513)
Q Consensus 125 ~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~ 204 (513)
++++|+.+|+|+|||++.+.. +.+.+++.+|.+|+++.+++.|.+++....+ .+|+.
T Consensus 73 ~~~~~~~~l~~~Y~~~~~~~~--------------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~---~~n~~ 129 (145)
T 4eoz_A 73 EPEVFKEMMCFIYTGKAPNLD--------------------KMADDLLAAADKYALERLKVMCEDALCSNLS---VENAA 129 (145)
T ss_dssp CHHHHHHHHHHHHHSCCTTGG--------------------GTHHHHHHHHHHTTCHHHHHHHHCC--------------
T ss_pred CHHHHHHHHHhhccCccCCcH--------------------HHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC---HHHHH
Confidence 555999999999999987654 3468999999999999999999999988777 78999
Q ss_pred hHHHHHHhcChHHHH
Q 010293 205 PILVAAFHCQLNQLR 219 (513)
Q Consensus 205 t~L~~A~~~~~~~L~ 219 (513)
.++.+|..++..+|.
T Consensus 130 ~~l~~A~~~~~~~Lk 144 (145)
T 4eoz_A 130 EILILADLHSADQLK 144 (145)
T ss_dssp ---------------
T ss_pred HHHHHHHHhCHHHhc
Confidence 999999999988775
No 87
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=5.7e-24 Score=180.20 Aligned_cols=109 Identities=26% Similarity=0.262 Sum_probs=100.6
Q ss_pred cccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHH
Q 010293 269 MHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAA 344 (513)
Q Consensus 269 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~ 344 (513)
.+..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+++| +++|.+|..|+||||+|+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG-ADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHH
Confidence 3678999999999999999999999999 54 478999999999999999999999998 999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 010293 345 RRKEPAVLVTLLSKGACASETTSDGQTAVAICRR 378 (513)
Q Consensus 345 ~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~ 378 (513)
..|+.+++++|+++|++++.+|..|+||||+|..
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 9999999999999999999999999999999943
No 88
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.90 E-value=2.7e-24 Score=209.18 Aligned_cols=160 Identities=17% Similarity=0.237 Sum_probs=136.2
Q ss_pred cCChhhHHHHHHHHHccCCCCccceEEEEc---CeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccC
Q 010293 44 NLSLSKLSSNLEKLLLDAEHDYTDADIVVE---GKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVP 120 (513)
Q Consensus 44 ~~~~~~l~~~l~~l~~~~~~~~sDv~~~v~---~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~ 120 (513)
..+++.+.+.|++++.++ .+|||+|+|+ |++|+|||+||+++|+||++||.++|.|+ ...+|.++++..
T Consensus 13 ~~h~~~ll~~l~~l~~~~--~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~------~~~~i~l~~~~~ 84 (279)
T 3i3n_A 13 SSHCSELSWRQNEQRRQG--LFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSES------RSGRVEMRKWSS 84 (279)
T ss_dssp TTHHHHHHHHHHHHHHHT--TTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------------EEECCCCSS
T ss_pred HhHHHHHHHHHHHHHhcC--CCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccc------cCCeEEeccccc
Confidence 468889999999999999 9999999998 99999999999999999999999999998 788999996655
Q ss_pred CCcccHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhccchhhhccc
Q 010293 121 YGKVGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVEKALV 200 (513)
Q Consensus 121 ~~~i~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~ 200 (513)
.+++++++|+.+|+|+|||++.+...+ +.+++.+|.+|+++.+++.|.+++....+ .
T Consensus 85 ~~~v~~~~f~~ll~~~Ytg~~~i~~~~--------------------v~~ll~~A~~l~i~~L~~~c~~~L~~~l~---~ 141 (279)
T 3i3n_A 85 EPGPEPDTVEAVIEYMYTGRIRVSTGS--------------------VHEVLELADRFLLIRLKEFCGEFLKKKLH---L 141 (279)
T ss_dssp TTCSCHHHHHHHHHHHHHSEEEEETTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHHHHCC---T
T ss_pred cCCCCHHHHHHHHHhhCcCCcccCHHH--------------------HHHHHHHHHHHCcHHHHHHHHHHHHHcCC---c
Confidence 445888899999999999999776543 58999999999999999999999988777 7
Q ss_pred CCchhHHHHHHhcChHHHHHHhhhhhhccCCCcc
Q 010293 201 EDVIPILVAAFHCQLNQLRSHCVQRVVRSNLDDV 234 (513)
Q Consensus 201 ~n~~t~L~~A~~~~~~~L~~~~~~~~~~~~~~~t 234 (513)
+||..++.+|..++...|.+.|.+++.+++....
T Consensus 142 ~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~ 175 (279)
T 3i3n_A 142 SNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVI 175 (279)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHT
T ss_pred chHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999987765443
No 89
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.89 E-value=2.5e-26 Score=217.06 Aligned_cols=178 Identities=10% Similarity=-0.029 Sum_probs=115.8
Q ss_pred CCchhHHHHHHhcChHH----HHHHhhhhhhccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchH
Q 010293 201 EDVIPILVAAFHCQLNQ----LRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRR 276 (513)
Q Consensus 201 ~n~~t~L~~A~~~~~~~----L~~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tp 276 (513)
.+..++|+.|+..+..+ |++.+.+++.++..|.|+++.|+..+. .+++++| +++|+++|.+ |..|+||
T Consensus 19 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~-~~~v~~L----l~~ga~~n~~---d~~g~tp 90 (229)
T 2vge_A 19 LNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGAN-YSIVDFL----ITAGANVNSP---DSHGWTP 90 (229)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTC-HHHHHHH----HHTTCCTTCC---CTTCCCH
T ss_pred cchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHH----HHCCCCCCCC---CCCCCCH
Confidence 34567777777777533 455555555566666666666666665 4455555 5556666666 6667777
Q ss_pred HHHHHhcCCHHHHHHHHHcC-CCC----CCCccHHHHH--HHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCH
Q 010293 277 IHKALDSDDVELLKLLLDES-NVT----LDDAYALHYA--AAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEP 349 (513)
Q Consensus 277 Lh~A~~~g~~~~v~~Ll~~g-~~~----~~g~tpLh~A--~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~ 349 (513)
||+|+..|+.++|++|+++| +++ ..|+||||+| +..|+.+++++|++.| ++++.+|..|.||++.++..+
T Consensus 91 Lh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~~l~~~~~~~-- 167 (229)
T 2vge_A 91 LHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVE-QSMGLMNSGAVYALWDYSAEF-- 167 (229)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH-HHTTTSGGGEEEESSCBCCSS--
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcC-CCcccccCCchHHHHHHhhcc--
Confidence 77777777777777777766 332 3666777776 6666677777777666 677766666666666544333
Q ss_pred HHHHHHHhCCCC--CCCCCCCCCcHHHHHHHcCCcccHHHHHh
Q 010293 350 AVLVTLLSKGAC--ASETTSDGQTAVAICRRMTRRKDYIEATK 390 (513)
Q Consensus 350 ~~v~~Ll~~gad--~~~~d~~g~tpL~~A~~~~~~~~v~~l~~ 390 (513)
.+++|++.|++ ++.+|..|+||||+|+..|+.++|+...-
T Consensus 168 -~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l 209 (229)
T 2vge_A 168 -GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYF 209 (229)
T ss_dssp -TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGGE
T ss_pred -ccccCccccccccccccCCCcccHHHHHHHcCCcceeehhhh
Confidence 22556666766 56777788888888888888777765443
No 90
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=8e-24 Score=187.21 Aligned_cols=138 Identities=16% Similarity=0.046 Sum_probs=107.0
Q ss_pred cCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCcc
Q 010293 229 SNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAY 304 (513)
Q Consensus 229 ~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~t 304 (513)
...+.|+++.|+..+. .++++++ +++|++++.. |..|+||||+|+ .|+.+++++|+++| ++ |..|+|
T Consensus 9 ~~~~~t~L~~A~~~g~-~~~v~~L----l~~g~~~~~~---~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~t 79 (156)
T 1bi7_B 9 MEPSADWLATAAARGR-VEEVRAL----LEAGANPNAP---NSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLT 79 (156)
T ss_dssp -CCSTTHHHHHHHHTC-HHHHHHH----HTTTCCTTCC---CSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCC
T ss_pred CccchHHHHHHHHcCC-HHHHHHH----HHcCCCCCCC---CCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCc
Confidence 4556777777777777 4555555 6778999988 889999999985 99999999999999 55 477998
Q ss_pred -HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 010293 305 -ALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAIC 376 (513)
Q Consensus 305 -pLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A 376 (513)
|||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||.+-+
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 80 RPVHDAAREGFLDTLVVLHRAG-ARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHHHHHHCCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 999999999999999999998 99999999999999999999999999999999999999999999998744
No 91
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.89 E-value=3.3e-23 Score=204.86 Aligned_cols=152 Identities=24% Similarity=0.400 Sum_probs=132.2
Q ss_pred CChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcc
Q 010293 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKV 124 (513)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i 124 (513)
.|++.|.++|.+++.++ .+|||+|+|+|++|+|||+|||+||+||++||.+++.|+ ...+|.|+++.|.
T Consensus 156 ~p~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~------~~~~i~l~~~~~~--- 224 (312)
T 3hqi_A 156 VPECRLADELGGLWENS--RFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES------KKNRVEINDVEPE--- 224 (312)
T ss_dssp CCCCCHHHHHHHHHHTT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----------CCSEEEECSSCHH---
T ss_pred CCCchHHHHHHHHHhCC--CCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCcccc------CCceEEecCCCHH---
Confidence 46678999999999999 999999999999999999999999999999999999998 7889999986555
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhccchhhhcccCCch
Q 010293 125 GYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVI 204 (513)
Q Consensus 125 ~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~~~~k~~~~n~~ 204 (513)
+|+.+|+|+|||++.+.. +.+.++|.+|++|+++.|+..|++++....+ .+|+.
T Consensus 225 ---~f~~~L~~iYt~~~~~~~--------------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~---~~n~~ 278 (312)
T 3hqi_A 225 ---VFKEMMCFIYTGKAPNLD--------------------KMADDLLAAADKYALERLKVMCEDALCSNLS---VENAA 278 (312)
T ss_dssp ---HHHHHHHHHHHSCCTTHH--------------------HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC---TTTHH
T ss_pred ---HHHHHHHhhcCCCCCChH--------------------HHHHHHHHHHHHhCHHHHHHHHHHHHHccCC---HHHHH
Confidence 999999999999986542 6679999999999999999999999987766 68999
Q ss_pred hHHHHHHhcChHHHHHHhhhhhhccCCCc
Q 010293 205 PILVAAFHCQLNQLRSHCVQRVVRSNLDD 233 (513)
Q Consensus 205 t~L~~A~~~~~~~L~~~~~~~~~~~~~~~ 233 (513)
..|.+|..+++..|.+.|.+++..+....
T Consensus 279 ~~l~~A~~~~~~~L~~~~~~~i~~~~~~v 307 (312)
T 3hqi_A 279 EILILADLHSADQLKTQAVDFINYHATDV 307 (312)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998765443
No 92
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.89 E-value=3.3e-23 Score=174.88 Aligned_cols=114 Identities=25% Similarity=0.342 Sum_probs=99.5
Q ss_pred cCChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCc
Q 010293 44 NLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGK 123 (513)
Q Consensus 44 ~~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~ 123 (513)
..+++.+.+++.++++++ .+|||+|.++|++|+|||+||++||+||++||.++|.|+ ....|.++++
T Consensus 6 ~~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~------~~~~i~l~~~----- 72 (120)
T 2if5_A 6 PDHSSDILSGLNEQRTQG--LLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVD------QQNVYEIDFV----- 72 (120)
T ss_dssp TTHHHHHHHHHHHHHHTT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----------CCSEEECCSS-----
T ss_pred cchHHHHHHHHHHHHhcC--CCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCcccc------CCceEEeCCC-----
Confidence 457889999999999999 999999999999999999999999999999999999988 7789999885
Q ss_pred ccHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhc
Q 010293 124 VGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRL 191 (513)
Q Consensus 124 i~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l 191 (513)
++++|+.+|+|+|||++.+.. +.+.+++.+|++|+++.+++.|.+++
T Consensus 73 -~~~~f~~ll~~~Yt~~~~~~~--------------------~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 73 -SAEALTALMDFAYTATLTVST--------------------ANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp -CHHHHHHHHHHHHHSCCCCCG--------------------GGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHcCCCCccCH--------------------HHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 455999999999999997764 34689999999999999999999864
No 93
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.89 E-value=5.4e-23 Score=178.99 Aligned_cols=120 Identities=18% Similarity=0.321 Sum_probs=101.0
Q ss_pred CCcccCChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEecccc
Q 010293 40 SSLDNLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELV 119 (513)
Q Consensus 40 ~~~~~~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~ 119 (513)
...+..+++.+.++|.++++++ .+|||+|+++|++|+|||+||++||+||++||.++|.+. ......|.++++
T Consensus 24 ~~~~~~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~----e~~~~~I~l~~v- 96 (144)
T 2ppi_A 24 AVSDPQHAARLLRALSSFREES--RFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKD----DGSTYKIELEGI- 96 (144)
T ss_dssp CCCCTTHHHHHHHHHHHTTC----CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC---------CCCEEECCSS-
T ss_pred eecCcchHHHHHHHHHHHHhcC--CCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccc----cCCCcEEEeCCC-
Confidence 3445578889999999999999 999999999999999999999999999999999988762 115678999885
Q ss_pred CCCcccHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhc
Q 010293 120 PYGKVGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRL 191 (513)
Q Consensus 120 ~~~~i~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l 191 (513)
++++|+.+|+|+|||++.+...+ +.+++.+|++|+++.|++.|.+++
T Consensus 97 -----~~~~f~~lL~fiYtg~~~i~~~~--------------------v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 97 -----SVMVMREILDYIFSGQIRLNEDT--------------------IQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp -----CHHHHHHHHHHHTTSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred -----CHHHHHHHHHHHhCCCCCCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHh
Confidence 55599999999999999876544 589999999999999999999875
No 94
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=1.7e-23 Score=196.37 Aligned_cols=127 Identities=19% Similarity=0.197 Sum_probs=112.4
Q ss_pred ccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHH
Q 010293 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAAR 345 (513)
Q Consensus 270 d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~ 345 (513)
+..|.||||+|+..|+.++|++|++.| ++ |..|+||||+|+..|+.+++++|+..+|+++|.+|..|+||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 788999999999999999999999999 54 47899999999999999999999999459999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCcc
Q 010293 346 RKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 396 (513)
Q Consensus 346 ~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~ 396 (513)
.|+.++|++|+++|++++.+|..|+||||+|+..|+.++++.+.+.|+...
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 999999999999999999999999999999999999999999999998664
No 95
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.88 E-value=1.1e-22 Score=176.07 Aligned_cols=118 Identities=19% Similarity=0.239 Sum_probs=106.0
Q ss_pred ccCChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEec-cccCC
Q 010293 43 DNLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMT-ELVPY 121 (513)
Q Consensus 43 ~~~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~-~~~~~ 121 (513)
...+++.+.++|.++++++ .+|||+|+++|++|+|||+||++||+||++||.+++.+. ..|.++ +
T Consensus 16 ~~~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--------~~i~l~~~---- 81 (138)
T 2z8h_A 16 SSVHSTNVLLSLNDQRKKD--VLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--------LTVTLPEE---- 81 (138)
T ss_dssp CSSHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--------EEEECCTT----
T ss_pred CCchHHHHHHHHHHHHhhC--CCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--------ceEEeCCC----
Confidence 4578899999999999999 999999999999999999999999999999999988764 478885 5
Q ss_pred CcccHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhccchhh
Q 010293 122 GKVGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVE 196 (513)
Q Consensus 122 ~~i~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~~~~ 196 (513)
+++++|+.+|+|+|||++.+...+ +.+++.+|.+|+++.|++.|.+++.....
T Consensus 82 --v~~~~~~~lL~~~Ytg~~~i~~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 82 --VTVKGFEPLIQFAYTAKLILSKDN--------------------VDEVCRCVEFLSVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp --SCHHHHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHHTCGGGHHHHHHHTTCCCS
T ss_pred --CCHHHHHHHHHHhcCCCcccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHHHhcc
Confidence 566699999999999999887544 58999999999999999999999887665
No 96
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=3.9e-23 Score=178.30 Aligned_cols=128 Identities=16% Similarity=0.060 Sum_probs=114.6
Q ss_pred hhhhccCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CCC---
Q 010293 224 QRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NVT--- 299 (513)
Q Consensus 224 ~~~~~~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~~--- 299 (513)
+++.++..+.|+++.++..+. .++++++ +++|++++.+ |..|+||||+|+. |+.+++++|+++| +++
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~-~~~v~~L----l~~g~~~~~~---~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~ 74 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQ-VETVRQL----LEAGADPNAL---NRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCAD 74 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTC-HHHHHHH----HHTTCCTTCC---CTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCB
T ss_pred CccCCCCCCccHHHHHHHcCC-HHHHHHH----HHcCCCcCCc---CCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcC
Confidence 445567778888888888777 5566666 6778999988 8999999999999 9999999999999 554
Q ss_pred CC-CccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCC
Q 010293 300 LD-DAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGAC 361 (513)
Q Consensus 300 ~~-g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad 361 (513)
.. |+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 75 PATLTRPVHDAAREGFLDTLVVLHRAG-ARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTC-CCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 66 999999999999999999999998 99999999999999999999999999999999986
No 97
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=5.1e-23 Score=187.13 Aligned_cols=120 Identities=24% Similarity=0.289 Sum_probs=109.2
Q ss_pred ccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCchHHHHHH
Q 010293 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKN-ARGHTVLHVAA 344 (513)
Q Consensus 270 d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d-~~g~tpLh~A~ 344 (513)
+..|.||||+|+..|+.+++++|++ | ++ |..|+||||+|+..|+.+++++|+++| +++|.+| ..|+||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHH
Confidence 6789999999999999999999999 7 44 578999999999999999999999998 9999998 89999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhc
Q 010293 345 RRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQ 391 (513)
Q Consensus 345 ~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~ 391 (513)
..|+.+++++|+++|++++.+|..|+||||+|++.++......++..
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~ 165 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQF 165 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHH
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHH
Confidence 99999999999999999999999999999999987765544444443
No 98
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.88 E-value=3.2e-22 Score=170.53 Aligned_cols=116 Identities=23% Similarity=0.304 Sum_probs=103.6
Q ss_pred ccCChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEe-ccccCC
Q 010293 43 DNLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLM-TELVPY 121 (513)
Q Consensus 43 ~~~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l-~~~~~~ 121 (513)
...+++.+.++|.++++++ .+|||+|+++|++|+|||+||++||+||++||.++|.| ....|.| ++
T Consensus 9 ~~~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-------~~~~i~l~~~---- 75 (127)
T 1r29_A 9 FTRHASDVLLNLNRLRSRD--ILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-------NLSVINLDPE---- 75 (127)
T ss_dssp CTTHHHHHHHHHHHHHHTT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-------TCSEEECCTT----
T ss_pred chhHHHHHHHHHHHHHhcC--CCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-------CCCEEEeCCC----
Confidence 3468889999999999999 99999999999999999999999999999999999886 3468999 66
Q ss_pred CcccHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhccc
Q 010293 122 GKVGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLN 193 (513)
Q Consensus 122 ~~i~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~ 193 (513)
+++++|+.+|+|+|||++.+...+ +.+++.+|.+|+++.|++.|.+++..
T Consensus 76 --~~~~~f~~ll~~~Ytg~~~~~~~~--------------------~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 76 --INPEGFNILLDFMYTSRLNLREGN--------------------IMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp --SCHHHHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHHHcCCCcCcCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 555699999999999999876543 58999999999999999999988654
No 99
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.87 E-value=3.1e-22 Score=168.42 Aligned_cols=111 Identities=24% Similarity=0.361 Sum_probs=98.6
Q ss_pred CChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcc
Q 010293 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKV 124 (513)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i 124 (513)
.+++.+.++|.++++++ .+|||+|+++|++|+|||+||++||+||++||.+++. ..|.++++
T Consensus 6 ~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~----------~~i~l~~~------ 67 (119)
T 3b84_A 6 QHSVRVLQELNKQREKG--QYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGSG----------GSVVLPAG------ 67 (119)
T ss_dssp HHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTTC----------CCEEECGG------
T ss_pred hHHHHHHHHHHHHHhcC--CCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCCC----------CeEEeCCC------
Confidence 57789999999999999 9999999999999999999999999999999998762 47888885
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhccc
Q 010293 125 GYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLN 193 (513)
Q Consensus 125 ~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~ 193 (513)
++++|+.+|+|+|||++.+..++ +.+++.+|++|+++.+++.|.+++.+
T Consensus 68 ~~~~f~~ll~~iYtg~~~~~~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 68 FAEIFGLLLDFFYTGHLALTSGN--------------------RDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp GHHHHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred CHHHHHHHHHHHcCCCCccCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 45599999999999999877544 58999999999999999999998764
No 100
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=1.6e-22 Score=192.81 Aligned_cols=110 Identities=26% Similarity=0.339 Sum_probs=103.3
Q ss_pred ccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCchHHHHHH
Q 010293 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKN-ARGHTVLHVAA 344 (513)
Q Consensus 270 d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d-~~g~tpLh~A~ 344 (513)
+..|.||||+|+..|+.++|++|++ | ++ |..|+||||+|+..|+.+++++|+++| +++|.+| ..|+||||+|+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHH
Confidence 5789999999999999999999999 7 54 478999999999999999999999998 9999998 78999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q 010293 345 RRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTR 381 (513)
Q Consensus 345 ~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~ 381 (513)
..|+.++|++|+++|++++.+|..|+||||+|+..++
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 156 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEVEDERGLTALELAREILK 156 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh
Confidence 9999999999999999999999999999999996543
No 101
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.87 E-value=3.6e-22 Score=171.86 Aligned_cols=115 Identities=23% Similarity=0.326 Sum_probs=97.7
Q ss_pred cCChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCc
Q 010293 44 NLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGK 123 (513)
Q Consensus 44 ~~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~ 123 (513)
..+.+.+.++|.++++++ .+|||+|+|+|++|+|||+||++||+||++||.+++. .+|.|+++
T Consensus 6 ~~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~----------~~i~l~~~----- 68 (135)
T 2yy9_A 6 SGHSVRVLQELNKQREKG--QYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGTG----------GSVVLPAG----- 68 (135)
T ss_dssp -CHHHHHHHHHHHHHHTT--TTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------------CCEEECGG-----
T ss_pred ccHHHHHHHHHHHHHhcC--CCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCCC----------CeEEeCCC-----
Confidence 468889999999999999 9999999999999999999999999999999998762 36888885
Q ss_pred ccHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhccchhh
Q 010293 124 VGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVE 196 (513)
Q Consensus 124 i~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~~~~ 196 (513)
++++|+.+|+|+|||++.+...+ +.+++.+|++|+++.|++.|.+++.....
T Consensus 69 -~~~~f~~lL~fiYtg~~~i~~~~--------------------v~~ll~~A~~l~i~~L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 69 -FAEIFGLLLDFFYTGHLALTSGN--------------------RDQVLLAAKELRVPEAVELCQSFQPQTSV 120 (135)
T ss_dssp -GHHHHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHCCC----
T ss_pred -CHHHHHHHHHHHhCCCCCCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHHHHhcc
Confidence 45599999999999999877544 58999999999999999999999877554
No 102
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.87 E-value=5.5e-23 Score=187.44 Aligned_cols=127 Identities=15% Similarity=0.062 Sum_probs=113.8
Q ss_pred ccchHHHHHHhcCCHHHHHHHHHcC--CCC-CCCccHHHHHHHcCCH----HHHHHHHHcCCCCcccCCCCCchHHHHHH
Q 010293 272 KRVRRIHKALDSDDVELLKLLLDES--NVT-LDDAYALHYAAAYCNP----KVFKEVLNMGLADLNLKNARGHTVLHVAA 344 (513)
Q Consensus 272 ~g~tpLh~A~~~g~~~~v~~Ll~~g--~~~-~~g~tpLh~A~~~g~~----~~v~~Ll~~~~advn~~d~~g~tpLh~A~ 344 (513)
.++++||.|++.|+.+.++.+++.+ ..+ ..|+||||+|+..|+. +++++||++| +|||.+|..|+||||+|+
T Consensus 5 ~~~~~l~~Aa~~g~~~~~~~l~~~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G-advn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 5 SEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKG-ADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HHCSSHHHHHHHSCHHHHHHHHHHSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTT-CCSSCCCTTCCCTHHHHH
T ss_pred ccccHHHHHHHcCCHHHHHHHHhcCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCC-CCCCCCCCCCCcHHHHHH
Confidence 4678999999999999999999988 334 6699999999999975 5899999998 999999999999999999
Q ss_pred HcCC------HHHHHHHHhCCCCCCCCCCCCC-cHHHHHHHcCC-----cccHHHHHh-cCCCccccc
Q 010293 345 RRKE------PAVLVTLLSKGACASETTSDGQ-TAVAICRRMTR-----RKDYIEATK-QGQETNKDR 399 (513)
Q Consensus 345 ~~g~------~~~v~~Ll~~gad~~~~d~~g~-tpL~~A~~~~~-----~~~v~~l~~-~g~~~~~~~ 399 (513)
..|+ .+++++|+++|||+|.+|..|+ ||||+|+..+. .+++++|++ .|++++..+
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d 151 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKD 151 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCC
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccC
Confidence 9987 5889999999999999999999 99999999654 458899999 999877655
No 103
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=9.3e-22 Score=157.81 Aligned_cols=93 Identities=30% Similarity=0.356 Sum_probs=81.8
Q ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q 010293 301 DDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMT 380 (513)
Q Consensus 301 ~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~ 380 (513)
+|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 4788999999999999999998887 899999999999999999999999999999999999999999999999999999
Q ss_pred CcccHHHHHhcCCC
Q 010293 381 RRKDYIEATKQGQE 394 (513)
Q Consensus 381 ~~~~v~~l~~~g~~ 394 (513)
+.+++++|++.|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999988863
No 104
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.86 E-value=1.7e-23 Score=211.48 Aligned_cols=149 Identities=12% Similarity=-0.011 Sum_probs=118.8
Q ss_pred chhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-C-----CCCCCccHHH
Q 010293 234 VCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-N-----VTLDDAYALH 307 (513)
Q Consensus 234 t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~-----~~~~g~tpLh 307 (513)
|+++.|+..+. .++++++ +++|+.....+..+..|.||||+|+..|+.++|++|+++| + ++..++||||
T Consensus 94 T~Lh~Aa~~G~-~e~v~~L----l~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh 168 (376)
T 2aja_A 94 VICFVAAITGC-SSALDTL----CLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFR 168 (376)
T ss_dssp HHHHHHHHHCC-HHHHHHH----TTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHH
T ss_pred CHHHHHHHcCC-HHHHHHH----HHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHH
Confidence 55555555555 3344444 4445532222223678899999999999999999999999 4 2333499999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCccc--CCCCCchHHHHHH-HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCccc
Q 010293 308 YAAAYCNPKVFKEVLNMGLADLNL--KNARGHTVLHVAA-RRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKD 384 (513)
Q Consensus 308 ~A~~~g~~~~v~~Ll~~~~advn~--~d~~g~tpLh~A~-~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~ 384 (513)
+||..|+.+++++|+++| ++++. +|..|+||||+|+ ..|+.++|++|+++|++ |.||||+|+.+|+.++
T Consensus 169 ~Aa~~G~~eiv~~Ll~~g-a~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~ev 240 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELA-PTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKYV 240 (376)
T ss_dssp HHHHTTCHHHHHHHHHSC-GGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTTTH
T ss_pred HHHHCCCHHHHHHHHHcC-CccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCHHH
Confidence 999999999999999998 99888 8889999999999 99999999999998853 8999999999999999
Q ss_pred HHHHHhcCCCc
Q 010293 385 YIEATKQGQET 395 (513)
Q Consensus 385 v~~l~~~g~~~ 395 (513)
+++|++.|.++
T Consensus 241 v~lL~~~ga~~ 251 (376)
T 2aja_A 241 NPFIARHVNRL 251 (376)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHhcCccc
Confidence 99999988654
No 105
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.86 E-value=6.9e-22 Score=166.90 Aligned_cols=111 Identities=23% Similarity=0.363 Sum_probs=98.9
Q ss_pred cCChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCc
Q 010293 44 NLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGK 123 (513)
Q Consensus 44 ~~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~ 123 (513)
..+++.+.+++.++++++ .+|||+|+++|++|+|||+||++||+||++||.++ ..+|.++++
T Consensus 9 ~~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----------~~~i~l~~~----- 70 (121)
T 1buo_A 9 PSHPTGLLCKANQMRLAG--TLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----------SQHYTLDFL----- 70 (121)
T ss_dssp TTHHHHHHHHHHHHHHHT--TTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----------CSEEEECSS-----
T ss_pred cchHHHHHHHHHHHHhcC--CCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----------CcEEEeCCC-----
Confidence 357889999999999999 99999999999999999999999999999999862 357888875
Q ss_pred ccHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhccc
Q 010293 124 VGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLN 193 (513)
Q Consensus 124 i~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~ 193 (513)
++++|+.+|+|+|||++.+.. +.+.+++.+|++|+++.+++.|.+++..
T Consensus 71 -~~~~f~~ll~~~Ytg~~~~~~--------------------~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 71 -SPKTFQQILEYAYTATLQAKA--------------------EDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp -CHHHHHHHHHHHHHSCCCCCG--------------------GGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHhhcCCCcCCCH--------------------HHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 555999999999999998764 3468999999999999999999988754
No 106
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.86 E-value=1.3e-21 Score=164.01 Aligned_cols=110 Identities=20% Similarity=0.322 Sum_probs=97.3
Q ss_pred CChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEec--cccCCC
Q 010293 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMT--ELVPYG 122 (513)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~--~~~~~~ 122 (513)
.+++.+.++|.++++++ .+|||+|+++|++|+|||+||++||+||++||.++ . ...|.|+ +
T Consensus 4 ~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-~---------~~~i~l~~~~----- 66 (116)
T 2vpk_A 4 HHCEHLLERLNKQREAG--FLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST-S---------ENNVFLDQSQ----- 66 (116)
T ss_dssp HHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC-C---------CSCEECCTTT-----
T ss_pred hHHHHHHHHHHHHHhcC--CCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC-C---------CCeEEeecCC-----
Confidence 46789999999999999 99999999999999999999999999999999876 1 2456666 6
Q ss_pred cccHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhcc
Q 010293 123 KVGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLL 192 (513)
Q Consensus 123 ~i~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~ 192 (513)
+++++|+.+|+|+|||++.+...+ +.+++.+|.+|+++.+++.|.+++.
T Consensus 67 -~~~~~f~~ll~~~Yt~~~~~~~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 67 -VKADGFQKLLEFIYTGTLNLDSWN--------------------VKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp -CCHHHHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred -CCHHHHHHHHHHHcCCCcccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 556699999999999999876544 5899999999999999999998764
No 107
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.86 E-value=1.2e-22 Score=172.78 Aligned_cols=113 Identities=22% Similarity=0.274 Sum_probs=99.3
Q ss_pred ccCChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCC
Q 010293 43 DNLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYG 122 (513)
Q Consensus 43 ~~~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~ 122 (513)
+..+++.+.+.|.++++++ .+|||+|+++|++|+|||+||++||+||++||.+++.|. ..|.+++
T Consensus 12 ~~~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--------~~i~l~~----- 76 (125)
T 3ohu_A 12 STVHCTNILLGLNDQRKKD--ILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKND--------LVVSLPE----- 76 (125)
T ss_dssp CSSHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCSS--------CEEECCT-----
T ss_pred cHHHHHHHHHHHHHHHhcC--CccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCCC--------cEEEeCC-----
Confidence 4568889999999999999 999999999999999999999999999999999988754 5788876
Q ss_pred cccHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHh
Q 010293 123 KVGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRR 190 (513)
Q Consensus 123 ~i~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~ 190 (513)
++++++|+.+|+|+|||++.+...+ +.+++.+|.+|+++.|++.|.++
T Consensus 77 ~~~~~~f~~~l~~iYtg~~~~~~~~--------------------v~~ll~~A~~l~i~~L~~~C~~~ 124 (125)
T 3ohu_A 77 EVTARGFGPLLQFAYTAKLLLSREN--------------------IREVIRCAEFLRMHNLEDSCFSF 124 (125)
T ss_dssp TCCHHHHHHHHHHHTTSEEEECTTT--------------------HHHHHHHHHHHTBSSCTTSSCCC
T ss_pred CCCHHHHHHHHHhHcCCceEECHHH--------------------HHHHHHHHHHhCCHHHHHHHHHh
Confidence 1455599999999999999877544 58999999999999998887654
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=2.8e-21 Score=187.73 Aligned_cols=125 Identities=18% Similarity=0.231 Sum_probs=117.4
Q ss_pred ccccchHHHHHHhcCCHHHHHHHHHcC-CC---------CCCCccHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCC
Q 010293 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---------TLDDAYALHYAAAY---CNPKVFKEVLNMGLADLNLKNARG 336 (513)
Q Consensus 270 d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---------~~~g~tpLh~A~~~---g~~~~v~~Ll~~~~advn~~d~~g 336 (513)
+....++|+.|+..|+.+.++.+++.| ++ +..|+||||+|+.. |+.+++++|+++| +++|.+|..|
T Consensus 127 ~~~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~in~~d~~g 205 (278)
T 1dcq_A 127 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQTGKG 205 (278)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCCCTTC
T ss_pred cchhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC-CCccccCCCC
Confidence 445678999999999999999999999 43 46799999999999 8999999999998 9999999999
Q ss_pred chHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCc
Q 010293 337 HTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 395 (513)
Q Consensus 337 ~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~ 395 (513)
+||||+|+..|+.++|++|+++|||++.+|..|+||||+|+..|+.+++++|++.|+..
T Consensus 206 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 206 STALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999999999999999998754
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.86 E-value=1.6e-23 Score=211.78 Aligned_cols=183 Identities=10% Similarity=-0.060 Sum_probs=147.9
Q ss_pred HhcChHHHHHHHHHhccchhhhcccCCchhHHHHHHhcChHHHHHHhhhhhh-------ccCCCcchhhhccChhhHHHH
Q 010293 176 AAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQLRSHCVQRVV-------RSNLDDVCLEKELPDEVSGEI 248 (513)
Q Consensus 176 ~~~~~~~L~~~~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~L~~~~~~~~~-------~~~~~~t~l~~a~~~~~~~~i 248 (513)
..++.+++.+++.+.+.+. .|+||+|++.|..++++..++... .+..+.||++.|+..++ .++
T Consensus 74 ~~~~~~~~~~~l~~~g~~~---------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~-~ei 143 (376)
T 2aja_A 74 YNRNAKQLWSDAHKKGIKS---------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGH-LHV 143 (376)
T ss_dssp TTTTCTTHHHHHHHHTCCH---------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTC-HHH
T ss_pred hcCCCHHHHHHHHHcCCCc---------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCC-HHH
Confidence 3367788888888776542 499999999999887766654432 23356789999999999 777
Q ss_pred HHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-C-----CCCCCccHHHHHH-HcCCHHHHHHH
Q 010293 249 KSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-N-----VTLDDAYALHYAA-AYCNPKVFKEV 321 (513)
Q Consensus 249 ~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~-----~~~~g~tpLh~A~-~~g~~~~v~~L 321 (513)
+++| +++|++++..+..+.+ .||||+|+..|+.++|++|+++| + +|..|+||||+|+ ..|+.+++++|
T Consensus 144 v~~L----l~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~L 218 (376)
T 2aja_A 144 LNRL----CELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFL 218 (376)
T ss_dssp HHHH----HHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHH
T ss_pred HHHH----HhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHH
Confidence 7777 7788763322221334 99999999999999999999999 6 6678999999999 99999999999
Q ss_pred HHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccH
Q 010293 322 LNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDY 385 (513)
Q Consensus 322 l~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v 385 (513)
++.| + .|.||||+|+..|+.+++++|+++|++++.++ +++++|+.+|+.+++
T Consensus 219 l~~g-a-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~----~~l~~A~~~g~~~vv 270 (376)
T 2aja_A 219 LDCP-V-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFDLV 270 (376)
T ss_dssp TTSH-H-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH----TTTTTTSSSSCCCCS
T ss_pred HhCC-C-------ccchHHHHHHHCCCHHHHHHHHhcCccccccc----HHHHHHHHCCChhhh
Confidence 9866 3 38999999999999999999999999988765 478899999998865
No 110
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.85 E-value=8.7e-22 Score=165.70 Aligned_cols=110 Identities=20% Similarity=0.292 Sum_probs=97.2
Q ss_pred cCChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCc
Q 010293 44 NLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGK 123 (513)
Q Consensus 44 ~~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~ 123 (513)
..+++.+.++|+++++++ .+|||+|+++|++|+|||+||++||+||++||.++ ...|.+++
T Consensus 8 ~~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-----------~~~i~l~~------ 68 (119)
T 2q81_A 8 PQHSQHVLEQLNQQRQLG--LLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ-----------KDVVHLDI------ 68 (119)
T ss_dssp HHHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC-----------CSGGGGGG------
T ss_pred chHHHHHHHHHHHHHhcC--CCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----------CCEEEeCC------
Confidence 357889999999999999 99999999999999999999999999999999872 24566766
Q ss_pred ccHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhcc
Q 010293 124 VGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLL 192 (513)
Q Consensus 124 i~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~ 192 (513)
+++++|+.+|+|+|||++.+...+ +.+++.+|++|+++.+++.|.+++.
T Consensus 69 ~~~~~f~~ll~~~Ytg~~~i~~~~--------------------~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 69 SNAAGLGQVLEFMYTAKLSLSPEN--------------------VDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCHHHHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHcCCCCccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 455699999999999999877544 5899999999999999999998764
No 111
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.85 E-value=4.6e-21 Score=162.07 Aligned_cols=121 Identities=31% Similarity=0.362 Sum_probs=107.9
Q ss_pred CcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHH
Q 010293 232 DDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALH 307 (513)
Q Consensus 232 ~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh 307 (513)
|.|+++.++..+. .++++.+ +++|++++.. |..|.||||+|+..|+.+++++|+++| ++ |..|.||||
T Consensus 2 g~t~L~~A~~~~~-~~~v~~L----l~~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~ 73 (126)
T 1n0r_A 2 GRTPLHLAARNGH-LEVVKLL----LEAGADVNAK---DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLH 73 (126)
T ss_dssp CCCHHHHHHHHTC-HHHHHHH----HHHTCCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CccHHHHHHHcCc-HHHHHHH----HHcCCCCCCc---CCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHH
Confidence 5677777776666 4455555 5678888888 889999999999999999999999999 54 578999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCC
Q 010293 308 YAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGAC 361 (513)
Q Consensus 308 ~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad 361 (513)
+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 74 ~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 74 LAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHcChHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999998 99999999999999999999999999999999986
No 112
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.85 E-value=2.1e-22 Score=170.85 Aligned_cols=112 Identities=21% Similarity=0.282 Sum_probs=97.6
Q ss_pred cCChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEec-cccCCC
Q 010293 44 NLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMT-ELVPYG 122 (513)
Q Consensus 44 ~~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~-~~~~~~ 122 (513)
..+++.+.++|.++++++ .+|||+|+++|++|+|||+||++||+||++||.+++.|+ ..|.++ +
T Consensus 10 ~~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--------~~i~l~~~----- 74 (124)
T 2ihc_A 10 SVHSTNVLLSLNDQRKKD--VLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--------LNITLPEE----- 74 (124)
T ss_dssp SSHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--------EEEECCTT-----
T ss_pred cchHHHHHHHHHHHHhcC--CCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--------ceEeecCC-----
Confidence 457889999999999999 999999999999999999999999999999999988764 477884 5
Q ss_pred cccHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhc
Q 010293 123 KVGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRL 191 (513)
Q Consensus 123 ~i~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l 191 (513)
+++++|+.+|+|+|||++.+...+ +.+++.+|.+|+++.+++.|.+++
T Consensus 75 -v~~~~f~~lL~~iYtg~~~i~~~~--------------------v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 75 -VTVKGFEPLIQFAYTAKLILSKEN--------------------VDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp -SCHHHHHHHHHHHHHSEEEEETTT--------------------HHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred -cCHHHHHHHHHHhcCCCcccCHHH--------------------HHHHHHHHHHHCCHHHHHHHHHHH
Confidence 566699999999999999776544 589999999999999999998765
No 113
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.85 E-value=1.3e-21 Score=161.99 Aligned_cols=102 Identities=18% Similarity=0.314 Sum_probs=86.3
Q ss_pred HHccCCCCccceEEEEcC----eEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcccHHHHHHH
Q 010293 57 LLLDAEHDYTDADIVVEG----KSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVI 132 (513)
Q Consensus 57 l~~~~~~~~sDv~~~v~~----~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~l 132 (513)
+++++ .+|||+|++++ ++|+|||.||++||+||++||.++|.|+ . ..|.++++. +++|+.+
T Consensus 2 l~~~~--~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~------~-~~i~l~~~~------~~~f~~~ 66 (109)
T 2vkp_A 2 MFNNE--LMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEV------K-SEIHIPDVE------PAAFLIL 66 (109)
T ss_dssp CTTCC--TTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------------C-CEEEETTSC------HHHHHHH
T ss_pred cccCC--CcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccC------C-CeEEeCCCC------HHHHHHH
Confidence 57788 99999999998 9999999999999999999999999987 6 889998854 4599999
Q ss_pred HHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhccc
Q 010293 133 LYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLN 193 (513)
Q Consensus 133 L~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~ 193 (513)
|+|+|||++.+...+ +.+++.+|++|+++.|++.|.+++..
T Consensus 67 l~~iYt~~~~~~~~~--------------------~~~ll~~A~~~~~~~L~~~c~~~l~~ 107 (109)
T 2vkp_A 67 LKYMYSDEIDLEADT--------------------VLATLYAAKKYIVPALAKACVNFLET 107 (109)
T ss_dssp HHHHHHCCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCCccCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 999999999877544 58999999999999999999988754
No 114
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.85 E-value=3.6e-21 Score=165.92 Aligned_cols=120 Identities=16% Similarity=0.137 Sum_probs=105.5
Q ss_pred CCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHH
Q 010293 231 LDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYAL 306 (513)
Q Consensus 231 ~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpL 306 (513)
.+.|+++.|+..+. .++++++ +++|++++.+ |..|+||||+|+..|+.+++++|+++| ++ |..|.|||
T Consensus 13 ~~~t~l~~A~~~g~-~~~v~~L----l~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L 84 (136)
T 2jab_A 13 DLGKKLLEAARAGQ-DDEVRIL----MANGADVNAK---DEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPL 84 (136)
T ss_dssp HHHHHHHHHHHHTC-HHHHHHH----HHTTCCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred cccHHHHHHHHhCC-HHHHHHH----HHcCCCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHH
Confidence 35566666666666 4455555 6678899888 899999999999999999999999999 54 57899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCC
Q 010293 307 HYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKG 359 (513)
Q Consensus 307 h~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 359 (513)
|+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 85 ~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 85 HLAAFIGHLEIAEVLLKHG-ADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHcCCHHHHHHHHHcC-CCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999998 999999999999999999999999999999986
No 115
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.85 E-value=4.5e-21 Score=201.86 Aligned_cols=126 Identities=21% Similarity=0.241 Sum_probs=114.5
Q ss_pred cchHHHHHHhcCCHHHHHHHHHcC-CC---------CCCCccHHHHHHH---cCCHHHHHHHHHcCCCCcccCCCCCchH
Q 010293 273 RVRRIHKALDSDDVELLKLLLDES-NV---------TLDDAYALHYAAA---YCNPKVFKEVLNMGLADLNLKNARGHTV 339 (513)
Q Consensus 273 g~tpLh~A~~~g~~~~v~~Ll~~g-~~---------~~~g~tpLh~A~~---~g~~~~v~~Ll~~~~advn~~d~~g~tp 339 (513)
..+.||.|+..|+.++|+.|++.| ++ +..|+||||+|+. .|+.+++++||++| +|+|.+|..|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-a~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-CCTTCCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC-CCCCccCCCCCcH
Confidence 347899999999999999999999 55 4579999999976 89999999999998 9999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCCCccccc
Q 010293 340 LHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDR 399 (513)
Q Consensus 340 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~ 399 (513)
||+|+..|+.++|++|+++|||++.+|..|+||||+|+..|+.+++++|++.|++++...
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~ 270 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFP 270 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999887543
No 116
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=1.2e-21 Score=192.50 Aligned_cols=138 Identities=17% Similarity=0.150 Sum_probs=109.1
Q ss_pred cchhhhccChhhHHHHHHHHhhcchhhccCcccCC---ccccccchHHHHHHhc---CCHHHHHHHHHcC-CC---CCCC
Q 010293 233 DVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVD---PMHAKRVRRIHKALDS---DDVELLKLLLDES-NV---TLDD 302 (513)
Q Consensus 233 ~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~---~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~g-~~---~~~g 302 (513)
.++++.++..+.+..+..+ +.+|++++... ..+..|.||||+|+.. |+.+++++|+++| ++ |..|
T Consensus 152 ~~~L~~A~~~g~~~~v~~l-----l~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G 226 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEA-----FANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADG 226 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHH-----HHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTC
T ss_pred HHHHhhhhhccCHHHHHHH-----HhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCC
Confidence 3445566555554444333 35677877610 0288999999999997 8999999999999 55 4789
Q ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCc
Q 010293 303 AYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRR 382 (513)
Q Consensus 303 ~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~ 382 (513)
+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++ .|.||||+|+.+|+.
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT-CCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 99999999999999999999997 99999999999999999999999999999999987 589999999998864
No 117
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=6.7e-21 Score=191.79 Aligned_cols=123 Identities=18% Similarity=0.155 Sum_probs=116.3
Q ss_pred ccccchHHHHHHhc-CCHHHHHHHHHcC-CCC-----CCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHH
Q 010293 270 HAKRVRRIHKALDS-DDVELLKLLLDES-NVT-----LDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHV 342 (513)
Q Consensus 270 d~~g~tpLh~A~~~-g~~~~v~~Ll~~g-~~~-----~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~ 342 (513)
+..+.||||+|+.. |+.+++++|+++| ++| ..|.||||+|+..|+.+++++|+++| +++|.+|..|+||||+
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G-advn~~d~~G~TpLh~ 274 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNG-ANVNQADSAGRGPLHH 274 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHH
Confidence 55678999999999 9999999999999 554 67999999999999999999999998 9999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCC
Q 010293 343 AARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQ 393 (513)
Q Consensus 343 A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~ 393 (513)
|+..|+.++|++|+++|+|++.+|..|+||||+|+..|+.+++++|...|.
T Consensus 275 A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999998774
No 118
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=1.4e-20 Score=150.88 Aligned_cols=89 Identities=36% Similarity=0.472 Sum_probs=83.7
Q ss_pred ccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcC
Q 010293 272 KRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRK 347 (513)
Q Consensus 272 ~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g 347 (513)
+|+||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcC
Confidence 4899999999999999999999999 54 478999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHhCCCC
Q 010293 348 EPAVLVTLLSKGAC 361 (513)
Q Consensus 348 ~~~~v~~Ll~~gad 361 (513)
+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999986
No 119
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=1e-20 Score=185.89 Aligned_cols=122 Identities=21% Similarity=0.270 Sum_probs=114.1
Q ss_pred cccchHHHHHHhcCCHHHHHHHHHcC-CC---------CCCCccHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCc
Q 010293 271 AKRVRRIHKALDSDDVELLKLLLDES-NV---------TLDDAYALHYAAAY---CNPKVFKEVLNMGLADLNLKNARGH 337 (513)
Q Consensus 271 ~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---------~~~g~tpLh~A~~~---g~~~~v~~Ll~~~~advn~~d~~g~ 337 (513)
..+.++||.|+..|+.+.|+.|++.| ++ +..|+||||+|+.. |+.+++++|++.| +++|.+|..|+
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-advn~~d~~G~ 227 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGN 227 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS-SCTTCCCTTCC
T ss_pred CchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC-CCCCCCCCCCC
Confidence 34567899999999999999999999 54 55799999999997 8999999999998 99999999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccHHHHHhcCC
Q 010293 338 TVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQ 393 (513)
Q Consensus 338 tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~l~~~g~ 393 (513)
||||+|+..|+.++|++|+++|||++.+|..|+||||+|+..|+.+++++|++.|+
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga 283 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQA 283 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999998765
No 120
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.83 E-value=2.3e-20 Score=160.95 Aligned_cols=101 Identities=20% Similarity=0.143 Sum_probs=96.3
Q ss_pred CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 010293 298 VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICR 377 (513)
Q Consensus 298 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 377 (513)
.|..|+||||+|+..|+.+++++|++.+ ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNG-SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 4688999999999999999999999998 999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcccHHHHHhcCCCccccc
Q 010293 378 RMTRRKDYIEATKQGQETNKDR 399 (513)
Q Consensus 378 ~~~~~~~v~~l~~~g~~~~~~~ 399 (513)
..|+.+++++|++.|++++..+
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~ 106 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVN 106 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCC
T ss_pred HcCCHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999876544
No 121
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=3.6e-21 Score=160.70 Aligned_cols=104 Identities=25% Similarity=0.304 Sum_probs=94.8
Q ss_pred cccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHH
Q 010293 269 MHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAA 344 (513)
Q Consensus 269 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~ 344 (513)
.|.+|+||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG-ADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT-CCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCCHHHHHH
Confidence 3889999999999999999999999999 54 578999999999999999999999987 999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHH
Q 010293 345 RRKEPAVLVTLLSKGACASETTSDGQTAV 373 (513)
Q Consensus 345 ~~g~~~~v~~Ll~~gad~~~~d~~g~tpL 373 (513)
..|+.+++++|+++|+|+|.++..|.||-
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999884
No 122
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.83 E-value=2.1e-21 Score=165.86 Aligned_cols=114 Identities=25% Similarity=0.387 Sum_probs=94.8
Q ss_pred ccCChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEec-cccCC
Q 010293 43 DNLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMT-ELVPY 121 (513)
Q Consensus 43 ~~~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~-~~~~~ 121 (513)
...+.+.+.+.|.++++++ .+|||+|+|+|++|+|||+||++||+||++||.++ ....|.++ +
T Consensus 13 ~~~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----------~~~~i~l~~~---- 76 (129)
T 3ga1_A 13 IPNFGNSILECLNEQRLQG--LYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----------RSAVVELPAA---- 76 (129)
T ss_dssp CTTHHHHHHHHHHHHHHTT--CSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----------CCSEEECCTT----
T ss_pred cCcHHHHHHHHHHHHHhcC--CCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----------CCCEEEECCC----
Confidence 3467889999999999999 99999999999999999999999999999999986 23578886 6
Q ss_pred CcccHHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhccch
Q 010293 122 GKVGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNF 194 (513)
Q Consensus 122 ~~i~~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~~ 194 (513)
+++++|+.+|+|+|||++.+...+ +.+++.+|.+|+++.+++.|.+++...
T Consensus 77 --~~~~~f~~ll~~iYtg~~~i~~~~--------------------~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 77 --VQPQSFQQILSFCYTGRLSMNVGD--------------------QDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp --CCHHHHHHHHHHHHHSEEECCTTT--------------------HHHHHHHHHHTTBTTSSCC--------
T ss_pred --CCHHHHHHHHHHHhCCccccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 555599999999999999887644 589999999999999999999887653
No 123
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.82 E-value=2.9e-20 Score=155.44 Aligned_cols=104 Identities=25% Similarity=0.365 Sum_probs=91.5
Q ss_pred ccCChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCC
Q 010293 43 DNLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYG 122 (513)
Q Consensus 43 ~~~~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~ 122 (513)
+..+++.+.+.+.++++++ .+|||+|+++|++|+|||+||++||+||++||.++ ...|.++++
T Consensus 11 ~~~~~~~l~~~l~~~~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----------~~~i~l~~~---- 73 (116)
T 3fkc_A 11 DIQYSGSLLNSLNEQRGHG--LFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----------GQVVELSFI---- 73 (116)
T ss_dssp CTTHHHHHHHHHHHHHHHT--TTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----------CSEEEECSS----
T ss_pred CccHHHHHHHHHHHHHhcC--CceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----------CCEEEeCCC----
Confidence 3457789999999999999 99999999999999999999999999999999874 357888875
Q ss_pred cccHHHHHHHHHHHhcCCC-CCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHH
Q 010293 123 KVGYEAFNVILYYFYTGKL-KPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVL 185 (513)
Q Consensus 123 ~i~~~~~~~lL~ylYtg~v-~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~ 185 (513)
++++|+.+|+|+|||++ .+.. +.+.+++.+|++|+++.|++
T Consensus 74 --~~~~f~~~l~~~Ytg~~~~~~~--------------------~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 74 --RAEIFAEILNYIYSSKIVRVRS--------------------DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp --CHHHHHHHHHHHTTSCCCSCCH--------------------HHHHHHHHHHHHHTCHHHHT
T ss_pred --CHHHHHHHHHhhcCCCcCCCCH--------------------HHHHHHHHHHHHhCccccCc
Confidence 45599999999999998 4542 66789999999999998874
No 124
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.82 E-value=3.9e-22 Score=190.07 Aligned_cols=165 Identities=13% Similarity=0.034 Sum_probs=132.7
Q ss_pred cccchHHHHHHhcCCHHHHHHHHHcC-CCCCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCH
Q 010293 271 AKRVRRIHKALDSDDVELLKLLLDES-NVTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEP 349 (513)
Q Consensus 271 ~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~ 349 (513)
..+.+++.+++..|+.+.+..+...+ +++..|.||||+|+..|+.++++.|+. + +++|.+|..|+||||+|+..|+.
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~-~~~~~~d~~g~t~L~~A~~~g~~ 90 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-D-RDVDAVDENGRTALLFVAGLGSD 90 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGSCHHHHHHHHHHHHHHHTTTCHHHHHHTTT-T-CCTTCBCTTSCBHHHHHHHHTCH
T ss_pred CCCccHHHHHHHcCCCcccccccccccccccCCCCHHHHHHHcCCHHHHHHHHc-C-CCCCCcCCCCCCHHHHHHHCCCH
Confidence 45667777777888877776666666 667889999999999999999999999 6 99999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCcccHHHHHhcCCCcccccchHHHHHHHHhcccCCCCcccchhhhc--
Q 010293 350 AVLVTLLSKGACASETT-SDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMA-- 426 (513)
Q Consensus 350 ~~v~~Ll~~gad~~~~d-~~g~tpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~-- 426 (513)
++|++|+++|++++.++ ..|+||||+|+..|+.+++++|++.|++++..+ ..|.++++.+...
T Consensus 91 ~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d--------------~~g~t~l~~A~~~~~ 156 (244)
T 3ui2_A 91 KCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVED--------------ERGLTALELAREILK 156 (244)
T ss_dssp HHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--------------TTCCCHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC--------------CCCCcHHHHHHHHHh
Confidence 99999999999999999 889999999999999999999999999886544 2333333333221
Q ss_pred cccchhhhhh---hhhhhhhhhcccccc
Q 010293 427 DDFQMKLNYL---ENRVAFARLLFPSEA 451 (513)
Q Consensus 427 ~~~~~~~l~l---~~~~~~~~~l~~~~a 451 (513)
.....+++++ .++.+++++|.+++.
T Consensus 157 ~~~~~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 157 TTPKGNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp TCCCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred ccCCCCHHHHHHHcChHHHHHHHHHhcc
Confidence 2233344444 566778888876543
No 125
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.81 E-value=7.8e-20 Score=154.52 Aligned_cols=101 Identities=18% Similarity=0.095 Sum_probs=93.2
Q ss_pred CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 010293 298 VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICR 377 (513)
Q Consensus 298 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 377 (513)
.+..|.||||+|+..|+.++++.|++.+ ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKG-EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTT-CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcC-CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 3467899999999999999999999998 999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcccHHHHHhcCCCccccc
Q 010293 378 RMTRRKDYIEATKQGQETNKDR 399 (513)
Q Consensus 378 ~~~~~~~v~~l~~~g~~~~~~~ 399 (513)
..|+.+++++|++.|+++...+
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~~~~ 103 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKTVKG 103 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCC
T ss_pred HcCCHHHHHHHHHcCCCCCCcC
Confidence 9999999999999999776444
No 126
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.81 E-value=3.4e-20 Score=168.35 Aligned_cols=134 Identities=19% Similarity=0.216 Sum_probs=112.7
Q ss_pred CCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CCC----CCCccH
Q 010293 231 LDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NVT----LDDAYA 305 (513)
Q Consensus 231 ~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~~----~~g~tp 305 (513)
.+.|+++.++..+.. ++++.+ +. |++++.+ |..|+||||+|+..|+.+++++|+++| ++| ..|+||
T Consensus 43 ~g~t~L~~A~~~g~~-~~v~~L----l~-~~~~~~~---d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tp 113 (183)
T 3deo_A 43 EYETPWWTAARKADE-QALSQL----LE-DRDVDAV---DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTA 113 (183)
T ss_dssp HHHHHHHHHHHTTCH-HHHHHH----TT-TSCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCH
T ss_pred CCCCHHHHHHHcCCH-HHHHHH----Hh-cCCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCH
Confidence 345666666665553 333444 34 7888887 899999999999999999999999999 553 679999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCcccH
Q 010293 306 LHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDY 385 (513)
Q Consensus 306 Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v 385 (513)
||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++. ..+.+||++|+..|+.+++
T Consensus 114 L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~ 175 (183)
T 3deo_A 114 LHMAAGYVRPEVVEALVELG-ADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVI 175 (183)
T ss_dssp HHHHHHTTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHcC-CCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHH
Confidence 99999999999999999998 99999999999999999985433 4578999999999999999
Q ss_pred HHHHhc
Q 010293 386 IEATKQ 391 (513)
Q Consensus 386 ~~l~~~ 391 (513)
++|.++
T Consensus 176 ~~L~~~ 181 (183)
T 3deo_A 176 NVLEGQ 181 (183)
T ss_dssp HHHHTC
T ss_pred HHHHHh
Confidence 998765
No 127
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.80 E-value=1.8e-20 Score=175.58 Aligned_cols=133 Identities=13% Similarity=0.093 Sum_probs=100.5
Q ss_pred cCCCcchhhhccChhhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHc-C-CC---CCCCc
Q 010293 229 SNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDE-S-NV---TLDDA 303 (513)
Q Consensus 229 ~~~~~t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-g-~~---~~~g~ 303 (513)
+..+.|+++.++..+. .++++.+ +++|++++.+ |..|+||||+|+..|+.++|++|++. | ++ |..|+
T Consensus 70 ~~~g~t~L~~A~~~g~-~~~v~~L----l~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~ 141 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGN-LSWLREC----LDNRVGVNGL---DKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGD 141 (222)
T ss_dssp EEEESCHHHHHHHHTC-HHHHHHH----HHTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSC
T ss_pred ccccccccccccccCc-HHHHHHH----HhCCCCcccc---CCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCC
Confidence 3445566666666655 4444555 5678999988 88999999999999999999999999 7 44 58899
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Q 010293 304 YALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQ 370 (513)
Q Consensus 304 tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~ 370 (513)
||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.++++.|++.|++.+.++..|+
T Consensus 142 tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 142 TALHAAAWKGYADIVQLLLAKG-ARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHT-CCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred CHHHHHHHcCCHHHHHHHHHcC-CCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 9999999999999999999998 99999999999999999999999999999999999888776554
No 128
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.79 E-value=2.4e-19 Score=188.62 Aligned_cols=133 Identities=18% Similarity=0.168 Sum_probs=101.7
Q ss_pred chhhhccChhhHHHHHHHHhhcchhhccCcccC---CccccccchHHHHHHh---cCCHHHHHHHHHcC-CCC---CCCc
Q 010293 234 VCLEKELPDEVSGEIKSLRVKSDEECEANIAEV---DPMHAKRVRRIHKALD---SDDVELLKLLLDES-NVT---LDDA 303 (513)
Q Consensus 234 t~l~~a~~~~~~~~i~~ll~~~~l~~ga~~~~~---~~~d~~g~tpLh~A~~---~g~~~~v~~Ll~~g-~~~---~~g~ 303 (513)
..++.|+..+.+..+. .+ +.+|+++|.. ...|..|.||||+||. .|+.++|++|+++| ++| ..|+
T Consensus 134 ~~L~~A~~~g~~~~v~-~l----l~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~ 208 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVL-EA----FANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGN 208 (497)
T ss_dssp HHHHHHHHHTCHHHHH-HH----HHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSC
T ss_pred HHHHHHHhccCHHHHH-HH----HhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCC
Confidence 3455555555533333 33 4667887754 1237789999999976 89999999999999 654 7899
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q 010293 304 YALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTA 372 (513)
Q Consensus 304 tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tp 372 (513)
||||+|+..|+.+++++||++| ||+|.+|.+|+||||+|+..|+.+++++|+++||+++.....+.++
T Consensus 209 TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~~~ 276 (497)
T 3lvq_E 209 TALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYS 276 (497)
T ss_dssp CHHHHHTTTTCHHHHHHHHHTC-CCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------------
T ss_pred cHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcceeecc
Confidence 9999999999999999999998 9999999999999999999999999999999999998843333333
No 129
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.79 E-value=9.8e-20 Score=151.90 Aligned_cols=100 Identities=27% Similarity=0.376 Sum_probs=95.9
Q ss_pred CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 010293 298 VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICR 377 (513)
Q Consensus 298 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 377 (513)
.|.+|+||||+|+..|+.+++++|++.+ ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKG-ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTT-CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 4689999999999999999999999998 999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcccHHHHHhcCCCcccc
Q 010293 378 RMTRRKDYIEATKQGQETNKD 398 (513)
Q Consensus 378 ~~~~~~~v~~l~~~g~~~~~~ 398 (513)
..|+.+++++|+++|++++..
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~ 104 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNAR 104 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHH
T ss_pred HCCCHHHHHHHHHcCCCCCcC
Confidence 999999999999999987643
No 130
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.79 E-value=9.7e-20 Score=152.69 Aligned_cols=103 Identities=18% Similarity=0.155 Sum_probs=86.3
Q ss_pred ChhhHHHHHHHHHccCCCCccceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCccc
Q 010293 46 SLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVG 125 (513)
Q Consensus 46 ~~~~l~~~l~~l~~~~~~~~sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i~ 125 (513)
+...+++.|. +.++ .+|||+|+|+|++|+|||+|||++|+||++ ....|.+++ ++
T Consensus 15 ~~~~~l~~l~--r~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------------~~~~i~l~~------v~ 69 (119)
T 3m5b_A 15 GSDRLVQLAA--RLRP--ALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------------RGQWALGEG------IS 69 (119)
T ss_dssp TTCHHHHHHH--HHTT--TTCCEEEEETTEEEEECHHHHHTTCGGGCC---------------CEEEECCSS------CC
T ss_pred chHHHHHHHH--HhcC--CCcceEEEECCEEEeeEHHHHHHcCHHHhc---------------CCCEEEeCC------CC
Confidence 4467777775 5677 899999999999999999999999999973 224677877 45
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhccc
Q 010293 126 YEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLN 193 (513)
Q Consensus 126 ~~~~~~lL~ylYtg~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~ 193 (513)
+++|+.+|+|+|||++.+.. +.+.+++.+|++|++..+++.|.+...+
T Consensus 70 ~~~f~~ll~fiYtg~~~i~~--------------------~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 70 PSTFAQLLNFVYGESVELQP--------------------GELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HHHHHHHHHHHTTCCEEECG--------------------GGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHcCCCcCcCH--------------------HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 55999999999999998765 3468999999999999999999988654
No 131
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.78 E-value=5.3e-19 Score=177.94 Aligned_cols=144 Identities=17% Similarity=0.146 Sum_probs=107.9
Q ss_pred CCCcchhhhccCh-hhHHHHHHHHhhcchhhccCcccCCccccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCcc
Q 010293 230 NLDDVCLEKELPD-EVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAY 304 (513)
Q Consensus 230 ~~~~t~l~~a~~~-~~~~~i~~ll~~~~l~~ga~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~t 304 (513)
..+.++++.|+.. +. .++++.+ +.+|+++|..+. +..|.||||+|+..|+.++|++|+++| ++ |..|+|
T Consensus 197 ~~~~t~L~~Aa~~~g~-~~~v~~L----L~~Gadvn~~~~-~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~T 270 (368)
T 3jue_A 197 LHPGALLFRASGHPPS-LPTMADA----LAHGADVNWVNG-GQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRG 270 (368)
T ss_dssp CCHHHHHHHHTSSSCC-HHHHHHH----HHTTCCTTCCCT-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCCcHHHHHHHccCC-HHHHHHH----HHcCCCCCcccc-ccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 3455788888887 77 4455555 678999998832 389999999999999999999999999 55 478999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCC---CCCCCCCCCCCcHHHHHHHcC
Q 010293 305 ALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKG---ACASETTSDGQTAVAICRRMT 380 (513)
Q Consensus 305 pLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g---ad~~~~d~~g~tpL~~A~~~~ 380 (513)
|||+|+..|+.+++++||++| ++++.+|..|+||||+|+..|+.+++++|+..| ++....+..+.|+++++....
T Consensus 271 pLh~A~~~g~~~~v~~LL~~G-ad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 271 PLHHATILGHTGLACLFLKRG-ADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred HHHHHHHcCcHHHHHHHHHCc-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 999999999999999999998 999999999999999999999999999999865 555566788999999887765
No 132
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.77 E-value=7.8e-19 Score=145.43 Aligned_cols=91 Identities=26% Similarity=0.203 Sum_probs=79.4
Q ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 010293 297 NVTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAIC 376 (513)
Q Consensus 297 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A 376 (513)
+++.+|.||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANG-ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 35678889999999999999999999887 89999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcccHHHH
Q 010293 377 RRMTRRKDYIEA 388 (513)
Q Consensus 377 ~~~~~~~~v~~l 388 (513)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 999998888765
No 133
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.74 E-value=4.9e-18 Score=164.81 Aligned_cols=105 Identities=24% Similarity=0.279 Sum_probs=93.3
Q ss_pred hhhccCccc---CCccccccchHHHHHHhc---CCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCC
Q 010293 257 EECEANIAE---VDPMHAKRVRRIHKALDS---DDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGL 326 (513)
Q Consensus 257 l~~ga~~~~---~~~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 326 (513)
+..|++++. .+..|..|+||||+|+.. |+.+++++|+++| ++ |..|+||||+|+..|+.+++++|+++|
T Consensus 150 l~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g- 228 (278)
T 1dcq_A 150 YADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGK- 228 (278)
T ss_dssp HHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-
T ss_pred HHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC-
Confidence 355666443 223378899999999999 8999999999999 55 478999999999999999999999988
Q ss_pred CCcccCCCCCchHHHHHHHcCCHHHHHHHHhCCCCC
Q 010293 327 ADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACA 362 (513)
Q Consensus 327 advn~~d~~g~tpLh~A~~~g~~~~v~~Ll~~gad~ 362 (513)
+|++.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 229 ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 229 ASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999863
No 134
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.70 E-value=6.2e-17 Score=133.89 Aligned_cols=86 Identities=20% Similarity=0.306 Sum_probs=80.5
Q ss_pred cccccchHHHHHHhcCCHHHHHHHHHcC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHHHH
Q 010293 269 MHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAA 344 (513)
Q Consensus 269 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~tpLh~A~ 344 (513)
.|.+|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|+.+| ++++.+|..|+||||+|+
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG-ADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccccCCCcHHHHHH
Confidence 3889999999999999999999999999 54 578999999999999999999999997 999999999999999999
Q ss_pred HcCCHHHHHHH
Q 010293 345 RRKEPAVLVTL 355 (513)
Q Consensus 345 ~~g~~~~v~~L 355 (513)
..|+.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 99999999987
No 135
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.09 E-value=2.4e-10 Score=100.36 Aligned_cols=116 Identities=17% Similarity=0.241 Sum_probs=79.4
Q ss_pred eEEEE-cCeEEeeehhhhhhccHHHHHHHhc-CCC-CCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHhcCCCCCC
Q 010293 68 ADIVV-EGKSVAVHRCILSARSQFFHELFKK-GND-NDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPS 144 (513)
Q Consensus 68 v~~~v-~~~~~~aHr~iLaarS~~F~~mf~~-~~~-e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylYtg~v~~~ 144 (513)
|+|+. +|++|.+||.+ |+.|+||++||.. ++. |+ ....|.|++ |+..+++.+++|+|+++-...
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~------~~~~Ipl~~------V~~~iL~kViey~~~h~~~~~ 69 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEG------DDDPVPLPN------VNAAILKKVIQWCTHHKDDPP 69 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------------CEECTT------SCHHHHHHHHHHHHHTTTCCC
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccc------cCCCcCCCC------ccHHHHHHHHHHHHHcCcCCC
Confidence 67765 79999999999 8999999999987 666 55 556788877 566699999999999874332
Q ss_pred CCCcccc----cccCCCCcc--CChhHHHHHHHHHHHHhcChHHHHHHHHHhccchhh
Q 010293 145 PSEVSTC----VDDACAHDA--CPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVE 196 (513)
Q Consensus 145 ~~~~~~c----~~~~c~h~~--c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~~~~ 196 (513)
+...... .+....... ..-..+.+.+|+.+|+++++..|+.+|.++.++.+.
T Consensus 70 ~~~~~~~~~~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~ 127 (159)
T 2ast_A 70 PPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 127 (159)
T ss_dssp -----------CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred CcccccccccchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 1110000 000000000 011247899999999999999999999999988766
No 136
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=98.88 E-value=3.6e-09 Score=84.51 Aligned_cols=82 Identities=16% Similarity=0.251 Sum_probs=58.3
Q ss_pred eEEEE-cCeEEeeehhhhhhccHHHHHHHhc--CCCCCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHh-----c-
Q 010293 68 ADIVV-EGKSVAVHRCILSARSQFFHELFKK--GNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFY-----T- 138 (513)
Q Consensus 68 v~~~v-~~~~~~aHr~iLaarS~~F~~mf~~--~~~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylY-----t- 138 (513)
|+++. +|++|.+||.+ |+.|+||++||.. ++.|+ ....|.|++ |+..+++.+++|+| +
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~------~~~~I~l~~------V~~~iL~kViey~~~h~~~~~ 70 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN------ETNEVNFRE------IPSHVLSKVCMYFTYKVRYTN 70 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------------CEEECTT------SCHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCcccc------CCCceECCC------CCHHHHHHHHHHHHHhcccCC
Confidence 55654 69999999999 9999999999986 56665 567888887 45559999999999 5
Q ss_pred --CCCCCCCCCcccccccCCCCccCChhHHHHHHHHHHHHhcC
Q 010293 139 --GKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQ 179 (513)
Q Consensus 139 --g~v~~~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~ 179 (513)
+.++...-+ -+.+.+|+.+|+.++
T Consensus 71 ~~~~i~~~~i~-----------------~~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 71 SSTEIPEFPIA-----------------PEIALELLMAANFLD 96 (97)
T ss_dssp CCSCCCCCCCC-----------------GGGHHHHHHHHHHHT
T ss_pred CcCCCCcCcCC-----------------HHHHHHHHHHHhhhC
Confidence 344311111 256799999999875
No 137
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.50 E-value=2.6e-07 Score=79.06 Aligned_cols=112 Identities=15% Similarity=0.189 Sum_probs=76.5
Q ss_pred eEEEE-cCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHhcCCCCCCCC
Q 010293 68 ADIVV-EGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPS 146 (513)
Q Consensus 68 v~~~v-~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylYtg~v~~~~~ 146 (513)
|+|+. +|++|.+||.+ |..|.+|+.||.... . ..|.|++ |+..+++.+++|+|...-...+.
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~--------~~Ipl~~------V~~~iL~kVieyc~~h~~~~~~~ 66 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG--M--------DPVPLPN------VNAAILKKVIQWCTHHKDDPPPP 66 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC--C--------SSEECTT------CCHHHHHHHHHHHHHHTTCC---
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC--C--------CceecCC------cCHHHHHHHHHHHHHhccCCCcc
Confidence 67776 68999999998 889999999997631 1 2577776 66669999999999876332111
Q ss_pred Ccccc----cccCCC-Ccc-CChhHHHHHHHHHHHHhcChHHHHHHHHHhccchhh
Q 010293 147 EVSTC----VDDACA-HDA-CPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVE 196 (513)
Q Consensus 147 ~~~~c----~~~~c~-h~~-c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~~~~ 196 (513)
....+ ...... ... ..-..+.+.+|+.+|+++++..|..+|.++.++.+.
T Consensus 67 ~~~~~~~~~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 67 EDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 122 (141)
T ss_dssp --------------HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred ccccccccchhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHc
Confidence 00000 000000 000 011247889999999999999999999999988765
No 138
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.23 E-value=1.2e-07 Score=83.03 Aligned_cols=113 Identities=16% Similarity=0.171 Sum_probs=49.2
Q ss_pred eEEEE-cCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHhcCCCCCCCC
Q 010293 68 ADIVV-EGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPS 146 (513)
Q Consensus 68 v~~~v-~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylYtg~v~~~~~ 146 (513)
|+|+. +|+.|.+||.+ |..|++|+.||..... ...|.|++ |+..+++.+++|+|+..-...+.
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~~---------~~~Ipl~~------V~~~iL~kVieyc~~h~~~~~~~ 69 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDCV---------DNGVPLPN------VTSKILAKVIEYCKRHVEAAASK 69 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC---------------------CCTT------SCHHHHHHHHHC-----------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccCC---------CCceeCCc------CcHHHHHHHHHHHHHcccCCCcc
Confidence 66664 79999999998 8899999999976422 12566665 67779999999999976432111
Q ss_pred Cccc-----ccccCCCCcc--CChhHHHHHHHHHHHHhcChHHHHHHHHHhccchhh
Q 010293 147 EVST-----CVDDACAHDA--CPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVE 196 (513)
Q Consensus 147 ~~~~-----c~~~~c~h~~--c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~~~~ 196 (513)
.... .......... ..-..+.+.+|+.+|+++++..|..+|.++.++.+.
T Consensus 70 ~~~~~~~~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik 126 (160)
T 2p1m_A 70 AEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIK 126 (160)
T ss_dssp -------------------------------CHHHHHHTTCHHHHHHHHHHHHHTTT
T ss_pred cccccccccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 0000 0000000000 012236788999999999999999999999888765
No 139
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=97.93 E-value=4.1e-05 Score=60.82 Aligned_cols=93 Identities=12% Similarity=0.136 Sum_probs=63.8
Q ss_pred eEEEE-cCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHhcCCCCCCCC
Q 010293 68 ADIVV-EGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPS 146 (513)
Q Consensus 68 v~~~v-~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylYtg~v~~~~~ 146 (513)
|+|+. +|.+|.++|.+ |..|.+++.|+..++ +. ....|.|++ |+..+++.+++|+|...-...+.
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~------~~~~Iplp~------V~~~iL~kVieyc~~h~~~~~~~ 71 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RE------SKGRIELKQ------FDSHILEKAVEYLNYNLKYSGVS 71 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TT------CTTEEEETT------SCHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-cc------CCCceecCC------cCHHHHHHHHHHHHHhcccCCCc
Confidence 67776 79999999997 889999999998865 44 446788887 56669999999997754211000
Q ss_pred CcccccccCCCCccCChhHHHHHHHHHHHHhcCh
Q 010293 147 EVSTCVDDACAHDACPPAINYAIELMYASAAFQM 180 (513)
Q Consensus 147 ~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~ 180 (513)
....... -| .-.-+.+++|+.+|+++++
T Consensus 72 ~~~~~i~--~w----~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 72 EDDDEIP--EF----EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp SSCSSCC--CC----CCCHHHHHHHHHHHHHHCC
T ss_pred cccccCC--Cc----cCCHHHHHHHHHHHHHhCc
Confidence 0000000 01 1234789999999998764
No 140
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.88 E-value=6.6e-05 Score=60.64 Aligned_cols=97 Identities=20% Similarity=0.269 Sum_probs=70.5
Q ss_pred ceEEEEcCeEEeeehhhhhhcc-HHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHhcCCCCCCC
Q 010293 67 DADIVVEGKSVAVHRCILSARS-QFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSP 145 (513)
Q Consensus 67 Dv~~~v~~~~~~aHr~iLaarS-~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylYtg~v~~~~ 145 (513)
=|+|.|+|+.|...+..|+... .+|.+||.+.+.-. + ......++-+ |-. ...|+.+|.|+.+|++.++.
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~-~-~~d~~~~~fi-DRd------p~~F~~IL~~lr~g~l~~p~ 77 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLD-S-DKDETGAYLI-DRD------PTYFGPVLNYLRHGKLVINK 77 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGG-G-GBCTTSCEEE-CSC------HHHHHHHHHHHHHSCCCCCT
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCC-c-CCCCCceEEe-cCC------hHHHHHHHHHhCCCeeCCCC
Confidence 3779999999999999998764 47889987643210 0 0012345555 434 44999999999999987654
Q ss_pred CCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhc
Q 010293 146 SEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRL 191 (513)
Q Consensus 146 ~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l 191 (513)
.-. ...++.-|..|++.+|++.|.+.+
T Consensus 78 ~~~-------------------~~~l~~Ea~fy~l~~L~~~l~~~i 104 (107)
T 3drz_A 78 DLA-------------------EEGVLEEAEFYNITSLIKLVKDKI 104 (107)
T ss_dssp TSC-------------------HHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCC-------------------HHHHHHHHHHCCCHHHHHHHHHHH
Confidence 221 257889999999999999998764
No 141
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=97.65 E-value=7.1e-05 Score=59.10 Aligned_cols=90 Identities=17% Similarity=0.227 Sum_probs=58.8
Q ss_pred eEEEE-cCeEEeeehhhhhhccHHHHHHHhcC-C-CCCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHhcCCCCC-
Q 010293 68 ADIVV-EGKSVAVHRCILSARSQFFHELFKKG-N-DNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKP- 143 (513)
Q Consensus 68 v~~~v-~~~~~~aHr~iLaarS~~F~~mf~~~-~-~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylYtg~v~~- 143 (513)
|+++. +|.+|.++|.+ |..|.+++.|+... . .|+ ....|.|++ |+..+++.+++|+|...-..
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~------~~~~Ipl~~------V~~~iL~kVieyc~~h~~~~~ 69 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN------ETNEVNFRE------IPSHVLSKVCMYFTYKVRYTN 69 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------------CEEECSS------CCHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccc------cCCceeCCC------CCHHHHHHHHHHHHHccccCC
Confidence 56666 79999999997 88999999999852 2 344 445787776 56669999999997643111
Q ss_pred CCCCcccccccCCCCccCChhHHHHHHHHHHHHhcCh
Q 010293 144 SPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQM 180 (513)
Q Consensus 144 ~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~ 180 (513)
...+.. -| .-..+.+++|+.+|+.+++
T Consensus 70 ~~~~i~------~w----~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 70 SSTEIP------EF----PIAPEIALELLMAANFLDC 96 (96)
T ss_dssp CCSCCC------CC----CCCTTTHHHHHHHHHHHTC
T ss_pred CcccCC------Cc----ccCHHHHHHHHHHHHHhCc
Confidence 011100 01 1123568999999998763
No 142
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=97.37 E-value=0.00086 Score=58.76 Aligned_cols=121 Identities=14% Similarity=0.173 Sum_probs=75.4
Q ss_pred ceEEEE-cCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHhcCCCCCCC
Q 010293 67 DADIVV-EGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSP 145 (513)
Q Consensus 67 Dv~~~v-~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylYtg~v~~~~ 145 (513)
-|+|+. +|..|.+++.+ +..|.+++.|+.....+. ........|.|++ |+..+++.+++|++..+-...+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~--~~~~~~~~Iplpn------V~s~iL~kVieyc~~h~~~~~~ 78 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDD--DEDDDEIVMPVPN------VRSSVLQKVIEWAEHHRDSNFP 78 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-------------CEEECTT------CCHHHHHHHHHHHHHTTTCCCC
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCccc--ccccCCCceeeCC------CCHHHHHHHHHHHHHcccCCCc
Confidence 366655 59999999998 778999999997533210 0000235677776 6666999999999776543322
Q ss_pred CC--cccc-cccCCCCcc--CChhHHHHHHHHHHHHhcChHHHHHHHHHhccchhh
Q 010293 146 SE--VSTC-VDDACAHDA--CPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVE 196 (513)
Q Consensus 146 ~~--~~~c-~~~~c~h~~--c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~~~~ 196 (513)
.. .... ......... ..-..+.+++|+.+|.++++..|..++.+..++.+.
T Consensus 79 ~~~~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ik 134 (169)
T 3v7d_A 79 DEDDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIR 134 (169)
T ss_dssp C--------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHc
Confidence 10 0000 000000000 011237889999999999999999999998887655
No 143
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.85 E-value=0.0056 Score=54.56 Aligned_cols=101 Identities=20% Similarity=0.290 Sum_probs=73.0
Q ss_pred eEEEEcCeEEeeehhhhhhcc-HHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHhcCCCCCCCC
Q 010293 68 ADIVVEGKSVAVHRCILSARS-QFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPS 146 (513)
Q Consensus 68 v~~~v~~~~~~aHr~iLaarS-~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylYtg~v~~~~~ 146 (513)
|+|.|+|+.|..-+..|.... .+|..||.+.+.-. ++ .....++-| |-.|. .|..||.|+.+|++.++..
T Consensus 14 V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~-~~-~De~geyFI-DRDP~------~F~~ILnyLRtG~L~lP~~ 84 (202)
T 3drx_A 14 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLD-SD-KDETGAYLI-DRDPT------YFGPVLNYLRHGKLVINKD 84 (202)
T ss_dssp EEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC------BCTTCCEEE-CSCST------THHHHHHHHHHSCCCCCTT
T ss_pred EEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccC-cc-cCCCccEEe-cCChH------HHHHHHHHhcCCccCCCCC
Confidence 678999999999999997653 37888987653210 00 112345555 44677 9999999999999876543
Q ss_pred CcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHHHHHHHhccchhh
Q 010293 147 EVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVE 196 (513)
Q Consensus 147 ~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~~~~~~~l~~~~~ 196 (513)
-. ...++.-|..|++..|++.|.+.+.....
T Consensus 85 ~~-------------------~~~l~eEA~FygL~~Lv~~l~~~i~ere~ 115 (202)
T 3drx_A 85 LA-------------------EEGVLEEAEFYNITSLIKLVKDKIRERDS 115 (202)
T ss_dssp SC-------------------HHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CC-------------------HHHHHHHHHHCCcHHHHHHHHHHHHHHhc
Confidence 21 24688999999999999999887765444
No 144
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=96.68 E-value=0.002 Score=52.11 Aligned_cols=91 Identities=16% Similarity=0.200 Sum_probs=59.0
Q ss_pred ceEEE-EcCeEEeeehhhhhhccHHHHHHHhcC--CCCCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHhcCCCCC
Q 010293 67 DADIV-VEGKSVAVHRCILSARSQFFHELFKKG--NDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKP 143 (513)
Q Consensus 67 Dv~~~-v~~~~~~aHr~iLaarS~~F~~mf~~~--~~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylYtg~v~~ 143 (513)
-|+|+ .+|.+|.+.|.+ |..|..++.|+... +.|. ....|.|++ |+..+++.+++|++...-..
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~------~~~~Iplpn------V~s~iL~kVieyc~~h~~~~ 84 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN------ETNEVNFRE------IPSHVLSKVCMYFTYKVRYT 84 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------------CEEECSS------CCHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccc------cCCceeCCC------CCHHHHHHHHHHHHHhhhcc
Confidence 36676 469999999984 68999999999742 2333 335677776 56669999999996543211
Q ss_pred -CCCCcccccccCCCCccCChhHHHHHHHHHHHHhcCh
Q 010293 144 -SPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQM 180 (513)
Q Consensus 144 -~~~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~ 180 (513)
...+.. -| .-.-+.+++|+.+|+++++
T Consensus 85 ~~~~~i~------~w----~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 85 NSSTEIP------EF----PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp SCSSCCC------CC----CCCHHHHHHHHHHHHHHTC
T ss_pred CCcCCCC------Cc----ccCHHHHHHHHHHHHHhCc
Confidence 111110 01 1234789999999998764
No 145
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=93.28 E-value=0.1 Score=42.24 Aligned_cols=85 Identities=15% Similarity=0.123 Sum_probs=57.6
Q ss_pred eEEEEcCeEEeeehhhhhhccH-HHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHhcCCCCCCCC
Q 010293 68 ADIVVEGKSVAVHRCILSARSQ-FFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPS 146 (513)
Q Consensus 68 v~~~v~~~~~~aHr~iLaarS~-~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylYtg~v~~~~~ 146 (513)
|+|.|||+.|..-+..|..... .|.+||+.... ......++-|+ =.|. .|..||.|+.+|++.++..
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~-----~~~~~g~~FiD-Rdp~------~F~~ILnylR~G~l~~p~~ 74 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLN-----YDPVLNEYFFD-RHPG------VFAQIINYYRSGKLHYPTD 74 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTT-----EETTTTEEEEC-SCTT------THHHHHHHHHHSCBCCCSS
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCC-----CCCCCCcEEEe-cChH------HHHHHHHHhcCCCCCCCCc
Confidence 7899999999999999975532 34445543211 11134566554 4666 9999999999999876643
Q ss_pred CcccccccCCCCccCChhHHHHHHHHHHHHhcChHHH
Q 010293 147 EVSTCVDDACAHDACPPAINYAIELMYASAAFQMKEL 183 (513)
Q Consensus 147 ~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L 183 (513)
-. ...++.-|..|++.+.
T Consensus 75 ~~-------------------~~~~~~Ea~fy~i~~~ 92 (115)
T 3kvt_A 75 VC-------------------GPLFEEELEFWGLDSN 92 (115)
T ss_dssp SC-------------------HHHHHHHHHHHTCCGG
T ss_pred cc-------------------HHHHHHHHHHhCCChH
Confidence 21 2467788888887653
No 146
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=92.59 E-value=0.23 Score=40.68 Aligned_cols=87 Identities=18% Similarity=0.230 Sum_probs=56.9
Q ss_pred ceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHhcCCCCCCCC
Q 010293 67 DADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPS 146 (513)
Q Consensus 67 Dv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylYtg~v~~~~~ 146 (513)
=|+|.|||+.|..-+..|...- ..||....+. ........++-|+- +...|..||.|+.+|++.++..
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p---~S~L~~~~~~--~~~~~~~g~~FiDR-------dp~~F~~ILnflR~G~l~~p~~ 81 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKE--FFFNEDTKEYFFDR-------DPEVFRCVLNFYRTGKLHYPRY 81 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTST---TSSTTSSGGG--GTBCSSSCSEEECS-------CHHHHHHHHHHHHHSCBCCCTT
T ss_pred EEEEEeCCEEEEEeHHHHhcCC---CceecccCCc--ccccCCCCcEEEcC-------ChHHHHHHHHHHhcCCCCCCCC
Confidence 3789999999999999997432 2344331000 00111234555542 4559999999999999876542
Q ss_pred CcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHH
Q 010293 147 EVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELV 184 (513)
Q Consensus 147 ~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~ 184 (513)
- .+..++.-|..|++..+.
T Consensus 82 ~-------------------~~~~l~~Ea~fy~i~~l~ 100 (124)
T 1s1g_A 82 E-------------------CISAYDDELAFYGILPEI 100 (124)
T ss_dssp S-------------------CHHHHHHHHHHTTCCGGG
T ss_pred c-------------------CHHHHHHHHHHcCCChHH
Confidence 2 136788899999998763
No 147
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=92.31 E-value=0.18 Score=39.65 Aligned_cols=86 Identities=15% Similarity=0.215 Sum_probs=56.8
Q ss_pred eEEEEcCeEEeeehhhhhhcc-HHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHhc-CCCCCCC
Q 010293 68 ADIVVEGKSVAVHRCILSARS-QFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYT-GKLKPSP 145 (513)
Q Consensus 68 v~~~v~~~~~~aHr~iLaarS-~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylYt-g~v~~~~ 145 (513)
|+|.|+|+.|...+..|...- ..+.+|+..... ......++-+ |=.|. .|+.||.|+.+ |++..++
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~-----~~~~~~eyFi-DRdp~------~F~~ILnflR~~G~l~~p~ 70 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRY-----YDPLRNEYFF-DRNRP------SFDAILYFYQSGGRLRRPV 70 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGG-----EETTTTEEEE-CSCST------THHHHHHHHHTTSCCCCCT
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccc-----cCCCceeEEE-cCChH------HHHHHHHHHhcCCcccCCC
Confidence 789999999999999996431 122334432110 0013356666 44666 99999999999 8886654
Q ss_pred CCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHH
Q 010293 146 SEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELV 184 (513)
Q Consensus 146 ~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~ 184 (513)
.- + +..++.-|..|++.++.
T Consensus 71 ~~-~------------------~~~~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 71 NV-P------------------LDVFSEEIKFYELGENA 90 (100)
T ss_dssp TS-C------------------HHHHHHHHHHTTCCHHH
T ss_pred CC-C------------------HHHHHHHHHHcCCCHHH
Confidence 32 1 35788899999987644
No 148
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=90.39 E-value=0.27 Score=41.12 Aligned_cols=87 Identities=18% Similarity=0.218 Sum_probs=56.7
Q ss_pred cceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHhcCCCCCCC
Q 010293 66 TDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSP 145 (513)
Q Consensus 66 sDv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylYtg~v~~~~ 145 (513)
.=|+|.|+|+.|..-+..|...- ..||....+. ........++-|+- +...|+.||.|+-+|++.++.
T Consensus 35 ~~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~--~~~~~~~g~yFiDR-------dp~~F~~ILnflR~G~l~~p~ 102 (140)
T 2nz0_B 35 ELIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKE--FFFNEDTKEYFFDR-------DPEVFRCVLNFYRTGKLHYPR 102 (140)
T ss_dssp CEEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGG--GSEETTTTEEEECS-------CHHHHHHHHHHHHHSSBCCCT
T ss_pred CEEEEEECCEEEEeeHHHHhcCC---CeeecccCCc--ccccCCCCeEEEeC-------CcHHHHHHHHHHhcCCcCCCC
Confidence 34789999999999999997432 2344431110 00111334555543 455999999999999987653
Q ss_pred CCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHH
Q 010293 146 SEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKEL 183 (513)
Q Consensus 146 ~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L 183 (513)
.- .+..++.-|..|++..+
T Consensus 103 ~~-------------------~~~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 103 YE-------------------CISAYDDELAFYGILPE 121 (140)
T ss_dssp TS-------------------CHHHHHHHHHHHTCCGG
T ss_pred Cc-------------------CHHHHHHHHHHcCCChH
Confidence 22 13568888888888765
No 149
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=87.78 E-value=0.66 Score=36.68 Aligned_cols=85 Identities=19% Similarity=0.194 Sum_probs=55.5
Q ss_pred eEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHhcCCCCCCCCC
Q 010293 68 ADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPSE 147 (513)
Q Consensus 68 v~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylYtg~v~~~~~~ 147 (513)
|+|.|+|+.|..-+..|....+ .|+....+. ........++-++ =.|. .|..||.|+-+|++..++.-
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~--~~~~~~~~~~FiD-Rdp~------~F~~ILnflR~g~l~~p~~~ 69 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERD--FFYHPETQQYFFD-RDPD------IFRHILNFYRTGKLHYPRHE 69 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGG--GGEEGGGTEEEEC-SCTT------THHHHHHHHHHSCBCCCTTS
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCc--ccccCCCCcEEEe-CCcH------HHHHHHHHHhcCCCCCCCCc
Confidence 7899999999999999975321 244331000 0001123455554 3566 99999999999998665422
Q ss_pred cccccccCCCCccCChhHHHHHHHHHHHHhcChHHH
Q 010293 148 VSTCVDDACAHDACPPAINYAIELMYASAAFQMKEL 183 (513)
Q Consensus 148 ~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L 183 (513)
. +..++.-|..|++..+
T Consensus 70 ~-------------------~~~l~~Ea~fy~i~~l 86 (105)
T 1nn7_A 70 C-------------------ISAYDEELAFFGLIPE 86 (105)
T ss_dssp C-------------------HHHHHHHHHHHTCCSC
T ss_pred C-------------------HHHHHHHHHHcCCCHH
Confidence 1 3568888899988765
No 150
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.27 E-value=1.4 Score=34.62 Aligned_cols=45 Identities=13% Similarity=0.051 Sum_probs=35.7
Q ss_pred cCCchhHHHHHHhcChHHHHHHhhhhhhccCCCcchhh--hccChhh
Q 010293 200 VEDVIPILVAAFHCQLNQLRSHCVQRVVRSNLDDVCLE--KELPDEV 244 (513)
Q Consensus 200 ~~n~~t~L~~A~~~~~~~L~~~~~~~~~~~~~~~t~l~--~a~~~~~ 244 (513)
.+||..++.+|..+++.+|.+.+.+|+.+++....... ..++.+.
T Consensus 10 ~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~ 56 (105)
T 2eqx_A 10 VGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRL 56 (105)
T ss_dssp TTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHH
Confidence 78999999999999999999999999988876554333 3444444
No 151
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=44.26 E-value=22 Score=36.49 Aligned_cols=88 Identities=16% Similarity=0.249 Sum_probs=53.8
Q ss_pred ceEEEEcCeEEeeehhhhhhccHHHHHHHhcCCCCCCCCcCCCCCeEEeccccCCCcccHHHHHHHHHHHhc-CCCCCCC
Q 010293 67 DADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYT-GKLKPSP 145 (513)
Q Consensus 67 Dv~~~v~~~~~~aHr~iLaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~~~~~~~i~~~~~~~lL~ylYt-g~v~~~~ 145 (513)
=|+|.|||+.|...+..|...- ..++....... ........++-++- +...|+.+|.|+.| |++..+.
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p---~s~l~~~~~~~-~~~~~~~~~~f~DR-------~~~~F~~IL~~~r~~g~l~~p~ 121 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFP---ETLLGDPKKRM-RYFDPLRNEYFFDR-------NRPSFDAILYYYQSGGRLRRPV 121 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTST---TSTTTCHHHHG-GGEETTTTEEEECS-------CHHHHHHHHHHHHHTSCCCCCT
T ss_pred EEEEEeCCEEEEecHHHHhcCC---CCcccccccCC-cccCCCCCCEEEcC-------ChHHHHHHHHHHhcCCccccCC
Confidence 3678999999999999986321 12222100000 00011334565532 45599999999999 8886553
Q ss_pred CCcccccccCCCCccCChhHHHHHHHHHHHHhcChHHHH
Q 010293 146 SEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELV 184 (513)
Q Consensus 146 ~~~~~c~~~~c~h~~c~~~~~~~~~lL~~A~~~~~~~L~ 184 (513)
. ++ ...++.-|..|++.+..
T Consensus 122 ~-~~------------------~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 122 N-VP------------------LDIFSEEIRFYELGEEA 141 (514)
T ss_dssp T-SC------------------HHHHHHHHHHTTCCHHH
T ss_pred c-cc------------------HHHHHHHHHhcCCCHHH
Confidence 3 21 24677888999986643
No 152
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=29.97 E-value=38 Score=27.39 Aligned_cols=36 Identities=11% Similarity=0.104 Sum_probs=25.9
Q ss_pred cCCchhHHHHHHhcChHHHHHHhhhhhhccCCCcch
Q 010293 200 VEDVIPILVAAFHCQLNQLRSHCVQRVVRSNLDDVC 235 (513)
Q Consensus 200 ~~n~~t~L~~A~~~~~~~L~~~~~~~~~~~~~~~t~ 235 (513)
.++...++..|..++...|++.|.++..++..+.++
T Consensus 89 ~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~~ 124 (135)
T 2yy9_A 89 SGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQAQ 124 (135)
T ss_dssp TTTHHHHHHHHHHTTCHHHHHHHHHCCC--------
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCCC
Confidence 477889999999999999999999998876655543
No 153
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=27.11 E-value=47 Score=20.49 Aligned_cols=17 Identities=29% Similarity=0.341 Sum_probs=14.6
Q ss_pred HHHHHhcCCHHHHHHHH
Q 010293 277 IHKALDSDDVELLKLLL 293 (513)
Q Consensus 277 Lh~A~~~g~~~~v~~Ll 293 (513)
+..||..|+++.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 67899999999998874
No 154
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=21.32 E-value=73 Score=17.19 Aligned_cols=18 Identities=33% Similarity=0.272 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHHHHHHhh
Q 010293 490 PSMQAKRLQLRLQALLKT 507 (513)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~ 507 (513)
.++..+.+|+|++.|-|-
T Consensus 6 lykeledlqerlrklrkk 23 (27)
T 3twe_A 6 LYKELEDLQERLRKLRKK 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 466778899999988653
Done!