Query 010296
Match_columns 513
No_of_seqs 877 out of 4038
Neff 11.3
Searched_HMMs 29240
Date Mon Mar 25 03:42:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010296.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010296hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 2.3E-48 7.8E-53 375.4 38.3 287 151-497 100-409 (410)
2 1got_B GT-beta; complex (GTP-b 100.0 6.5E-47 2.2E-51 356.1 39.7 288 150-496 46-340 (340)
3 3ow8_A WD repeat-containing pr 100.0 3.8E-47 1.3E-51 354.1 37.4 289 151-497 24-319 (321)
4 2pbi_B Guanine nucleotide-bind 100.0 6.4E-46 2.2E-50 350.9 38.3 289 150-496 55-354 (354)
5 4g56_B MGC81050 protein; prote 100.0 4.5E-46 1.5E-50 352.2 34.4 291 155-503 38-347 (357)
6 3iz6_a 40S ribosomal protein R 100.0 1.7E-46 5.8E-51 358.8 31.4 306 144-500 51-376 (380)
7 2ynn_A Coatomer subunit beta'; 100.0 9.1E-46 3.1E-50 342.6 34.3 288 151-499 5-302 (304)
8 3frx_A Guanine nucleotide-bind 100.0 3.9E-45 1.3E-49 340.7 36.7 294 150-499 8-317 (319)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.4E-45 1.5E-49 344.2 36.7 316 150-503 6-339 (345)
10 4gqb_B Methylosome protein 50; 100.0 1.3E-45 4.4E-50 346.2 32.1 295 156-501 27-333 (344)
11 4ery_A WD repeat-containing pr 100.0 1.4E-43 4.8E-48 329.7 40.2 293 150-498 14-311 (312)
12 1nr0_A Actin interacting prote 100.0 6E-44 2E-48 362.4 39.6 354 143-499 43-522 (611)
13 2xzm_R RACK1; ribosome, transl 100.0 6.7E-44 2.3E-48 336.1 37.0 298 150-500 12-341 (343)
14 2hes_X YDR267CP; beta-propelle 100.0 7.6E-44 2.6E-48 333.6 36.2 293 150-499 5-328 (330)
15 1nr0_A Actin interacting prote 100.0 1.9E-43 6.6E-48 358.7 38.0 310 143-501 174-569 (611)
16 1erj_A Transcriptional repress 100.0 1.4E-42 4.7E-47 333.3 37.3 312 157-500 62-390 (393)
17 4aow_A Guanine nucleotide-bind 100.0 5.5E-42 1.9E-46 323.0 37.5 300 148-502 27-340 (340)
18 1gxr_A ESG1, transducin-like e 100.0 7.4E-41 2.5E-45 314.7 39.5 287 154-498 46-336 (337)
19 2ymu_A WD-40 repeat protein; u 100.0 1.9E-41 6.4E-46 343.1 37.9 283 149-496 293-577 (577)
20 3ei3_B DNA damage-binding prot 100.0 1.8E-41 6.2E-46 325.0 32.7 307 149-499 63-382 (383)
21 1vyh_C Platelet-activating fac 100.0 3E-41 1E-45 325.6 33.7 254 143-452 134-410 (410)
22 3dm0_A Maltose-binding peripla 100.0 7.5E-41 2.6E-45 345.3 37.3 291 153-498 376-692 (694)
23 3zwl_B Eukaryotic translation 100.0 3.1E-40 1.1E-44 314.5 38.8 289 150-500 23-347 (369)
24 1sq9_A Antiviral protein SKI8; 100.0 4.5E-41 1.5E-45 323.9 32.4 309 151-500 8-396 (397)
25 3i2n_A WD repeat-containing pr 100.0 4.5E-41 1.5E-45 319.0 29.2 298 153-500 12-354 (357)
26 3odt_A Protein DOA1; ubiquitin 100.0 5.9E-40 2E-44 305.3 35.9 287 149-502 8-299 (313)
27 2ynn_A Coatomer subunit beta'; 100.0 4.4E-40 1.5E-44 304.4 33.7 247 215-501 8-261 (304)
28 3ow8_A WD repeat-containing pr 100.0 4.8E-40 1.6E-44 306.1 33.5 245 152-452 73-320 (321)
29 3k26_A Polycomb protein EED; W 100.0 9.8E-41 3.3E-45 317.7 29.4 306 154-498 13-365 (366)
30 2ymu_A WD-40 repeat protein; u 100.0 1.8E-39 6.3E-44 328.5 40.3 286 151-500 8-335 (577)
31 1r5m_A SIR4-interacting protei 100.0 6.5E-40 2.2E-44 318.6 34.3 295 155-501 41-363 (425)
32 4e54_B DNA damage-binding prot 100.0 2.3E-40 8E-45 322.4 29.6 308 152-501 112-432 (435)
33 2pm9_A Protein WEB1, protein t 100.0 2.1E-40 7.3E-45 321.2 28.0 287 157-500 65-415 (416)
34 4gqb_B Methylosome protein 50; 100.0 2E-39 6.7E-44 304.2 33.4 245 156-454 79-332 (344)
35 1got_B GT-beta; complex (GTP-b 100.0 5.4E-39 1.8E-43 302.1 35.9 248 216-502 51-304 (340)
36 1r5m_A SIR4-interacting protei 100.0 2.4E-39 8.3E-44 314.5 33.9 280 158-498 107-424 (425)
37 1k8k_C P40, ARP2/3 complex 41 100.0 3.7E-39 1.3E-43 307.6 34.6 288 155-500 4-362 (372)
38 3vl1_A 26S proteasome regulato 100.0 2.1E-39 7.3E-44 314.6 33.0 282 160-500 57-366 (420)
39 4aez_A CDC20, WD repeat-contai 100.0 6E-39 2E-43 309.2 35.6 287 155-503 87-384 (401)
40 3vl1_A 26S proteasome regulato 100.0 5.1E-39 1.7E-43 312.0 34.7 299 143-499 82-419 (420)
41 1yfq_A Cell cycle arrest prote 100.0 3.7E-39 1.3E-43 304.0 31.7 304 153-510 5-339 (342)
42 3gre_A Serine/threonine-protei 100.0 2.5E-39 8.5E-44 315.9 31.5 321 144-496 48-437 (437)
43 3dwl_C Actin-related protein 2 100.0 2E-40 6.8E-45 317.1 22.6 285 155-497 7-377 (377)
44 3frx_A Guanine nucleotide-bind 100.0 1.5E-38 5.3E-43 296.0 34.1 257 149-454 55-318 (319)
45 2pm9_A Protein WEB1, protein t 100.0 2.1E-39 7.2E-44 314.3 27.3 288 158-502 11-340 (416)
46 2pbi_B Guanine nucleotide-bind 100.0 5.5E-38 1.9E-42 296.6 35.2 258 143-450 90-354 (354)
47 4gga_A P55CDC, cell division c 100.0 8.3E-38 2.8E-42 303.0 37.3 277 161-500 107-396 (420)
48 2pm7_B Protein transport prote 100.0 5.8E-38 2E-42 289.2 33.9 249 153-454 3-286 (297)
49 4a11_B DNA excision repair pro 100.0 4.5E-38 1.6E-42 303.9 34.1 317 143-502 27-368 (408)
50 3mmy_A MRNA export factor; mRN 100.0 1.2E-37 4E-42 296.6 35.7 317 144-510 24-358 (368)
51 4g56_B MGC81050 protein; prote 100.0 4.3E-38 1.5E-42 297.5 31.9 248 154-455 89-345 (357)
52 2hes_X YDR267CP; beta-propelle 100.0 6.7E-38 2.3E-42 293.2 32.6 249 157-453 56-328 (330)
53 2pm7_B Protein transport prote 100.0 1.7E-37 5.7E-42 286.1 34.4 247 216-500 5-286 (297)
54 1gxr_A ESG1, transducin-like e 100.0 7.2E-38 2.5E-42 294.3 31.2 283 158-503 8-300 (337)
55 3mkq_A Coatomer beta'-subunit; 100.0 7.7E-38 2.6E-42 329.6 35.0 290 151-500 5-303 (814)
56 4h5i_A Guanine nucleotide-exch 100.0 9.6E-39 3.3E-43 302.8 25.1 296 159-502 14-346 (365)
57 3sfz_A APAF-1, apoptotic pepti 100.0 2.4E-37 8.2E-42 340.3 39.9 288 152-498 608-912 (1249)
58 3v7d_B Cell division control p 100.0 5.5E-37 1.9E-41 301.7 37.6 284 150-501 112-423 (464)
59 2xzm_R RACK1; ribosome, transl 100.0 2E-37 6.7E-42 291.9 32.8 261 150-454 67-341 (343)
60 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.1E-36 3.7E-41 297.8 39.1 294 143-501 143-444 (445)
61 4ggc_A P55CDC, cell division c 100.0 1.4E-36 4.6E-41 283.3 37.8 276 162-500 28-316 (318)
62 3iz6_a 40S ribosomal protein R 100.0 8.9E-38 3E-42 298.4 29.7 268 142-454 91-376 (380)
63 1pgu_A Actin interacting prote 100.0 4.6E-37 1.6E-41 313.3 36.6 354 143-500 43-573 (615)
64 2oaj_A Protein SNI1; WD40 repe 100.0 2.7E-37 9.4E-42 324.7 35.6 202 156-380 14-248 (902)
65 3v7d_B Cell division control p 100.0 1.9E-36 6.7E-41 297.8 38.4 288 143-496 146-460 (464)
66 3dw8_B Serine/threonine-protei 100.0 1.5E-37 5.3E-42 304.1 29.4 306 157-497 26-444 (447)
67 3jrp_A Fusion protein of prote 100.0 9.2E-37 3.1E-41 291.7 34.1 253 151-454 3-288 (379)
68 3bg1_A Protein SEC13 homolog; 100.0 5.4E-38 1.9E-42 291.9 24.3 247 154-454 8-294 (316)
69 1erj_A Transcriptional repress 100.0 1.3E-36 4.4E-41 291.7 34.4 238 160-454 124-390 (393)
70 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.3E-36 8E-41 284.6 34.5 251 155-454 57-336 (345)
71 1p22_A F-BOX/WD-repeat protein 100.0 1.6E-36 5.5E-41 295.5 33.7 277 155-502 129-417 (435)
72 3sfz_A APAF-1, apoptotic pepti 100.0 3.3E-37 1.1E-41 339.2 32.4 319 143-502 727-1161(1249)
73 1pgu_A Actin interacting prote 100.0 1.9E-36 6.6E-41 308.7 35.4 297 143-499 187-614 (615)
74 2oaj_A Protein SNI1; WD40 repe 100.0 1.7E-36 5.7E-41 318.7 34.9 206 143-371 43-309 (902)
75 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-35 4.2E-40 290.3 38.6 284 150-503 109-395 (445)
76 4ery_A WD repeat-containing pr 100.0 7.7E-36 2.6E-40 277.4 34.7 249 215-501 18-270 (312)
77 3bg1_A Protein SEC13 homolog; 100.0 3.3E-37 1.1E-41 286.6 24.7 245 216-500 9-294 (316)
78 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-37 4.4E-42 306.3 22.9 301 153-501 201-519 (524)
79 2aq5_A Coronin-1A; WD40 repeat 100.0 3.1E-36 1.1E-40 290.5 30.4 288 160-501 35-344 (402)
80 3f3f_A Nucleoporin SEH1; struc 100.0 4.3E-36 1.5E-40 283.4 30.7 294 153-502 5-340 (351)
81 3mkq_A Coatomer beta'-subunit; 100.0 5.8E-36 2E-40 315.3 33.9 326 143-498 39-422 (814)
82 3dm0_A Maltose-binding peripla 100.0 9.2E-36 3.1E-40 307.3 33.9 265 151-452 422-692 (694)
83 4aez_A CDC20, WD repeat-contai 100.0 2.6E-35 8.8E-40 283.8 32.3 257 143-455 117-382 (401)
84 3jrp_A Fusion protein of prote 100.0 4.4E-35 1.5E-39 280.0 30.9 252 215-500 6-288 (379)
85 3vu4_A KMHSV2; beta-propeller 100.0 5.3E-35 1.8E-39 276.2 31.1 292 146-503 6-340 (355)
86 4aow_A Guanine nucleotide-bind 100.0 2.1E-34 7.2E-39 271.1 35.0 259 150-455 77-339 (340)
87 2j04_A TAU60, YPL007P, hypothe 100.0 1.4E-34 4.6E-39 277.2 32.8 307 157-510 13-373 (588)
88 3jro_A Fusion protein of prote 100.0 2E-35 6.9E-40 306.4 28.3 250 153-453 3-285 (753)
89 3k26_A Polycomb protein EED; W 100.0 1.5E-35 5.1E-40 281.9 25.1 255 143-452 48-365 (366)
90 1k8k_C P40, ARP2/3 complex 41 100.0 6.5E-35 2.2E-39 278.2 27.9 289 144-455 35-363 (372)
91 2j04_B YDR362CP, TAU91; beta p 100.0 1.4E-35 4.8E-40 291.8 23.7 270 158-482 132-458 (524)
92 4gga_A P55CDC, cell division c 100.0 7.7E-34 2.6E-38 275.1 35.4 255 142-454 128-396 (420)
93 3zwl_B Eukaryotic translation 100.0 1.1E-33 3.8E-38 269.2 34.3 255 143-454 58-347 (369)
94 3ei3_B DNA damage-binding prot 100.0 2E-34 6.8E-39 276.0 29.0 255 143-453 100-382 (383)
95 1sq9_A Antiviral protein SKI8; 100.0 1.2E-34 4.1E-39 279.0 27.6 268 151-454 54-396 (397)
96 2vdu_B TRNA (guanine-N(7)-)-me 100.0 8.2E-34 2.8E-38 277.6 32.5 326 159-500 4-392 (450)
97 3odt_A Protein DOA1; ubiquitin 100.0 2.7E-33 9.4E-38 260.2 33.9 252 143-454 43-297 (313)
98 2aq5_A Coronin-1A; WD40 repeat 100.0 3.3E-34 1.1E-38 276.3 27.3 256 150-454 72-343 (402)
99 4a11_B DNA excision repair pro 100.0 2.2E-33 7.5E-38 271.1 32.7 280 157-499 97-405 (408)
100 3dwl_C Actin-related protein 2 100.0 2.2E-34 7.6E-39 275.1 25.1 288 143-451 37-377 (377)
101 3bws_A Protein LP49; two-domai 100.0 4.4E-33 1.5E-37 271.3 31.9 289 152-498 116-431 (433)
102 3gre_A Serine/threonine-protei 100.0 2.3E-34 7.8E-39 280.7 22.5 275 166-505 34-365 (437)
103 3i2n_A WD repeat-containing pr 100.0 2.5E-33 8.6E-38 265.6 28.4 261 156-454 62-354 (357)
104 2xyi_A Probable histone-bindin 100.0 3.8E-33 1.3E-37 271.0 29.0 247 216-500 124-411 (430)
105 4h5i_A Guanine nucleotide-exch 100.0 1.2E-33 4E-38 267.8 24.3 251 154-454 68-344 (365)
106 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-33 3.7E-38 266.4 23.5 270 165-501 42-335 (343)
107 3jro_A Fusion protein of prote 100.0 2.7E-33 9.4E-38 290.4 28.6 252 215-500 4-286 (753)
108 4ggc_A P55CDC, cell division c 100.0 4.3E-32 1.5E-36 252.8 33.7 255 142-454 48-316 (318)
109 1p22_A F-BOX/WD-repeat protein 100.0 7E-33 2.4E-37 269.8 29.4 265 143-477 157-434 (435)
110 2xyi_A Probable histone-bindin 100.0 5.6E-33 1.9E-37 269.8 28.7 270 153-454 122-411 (430)
111 1yfq_A Cell cycle arrest prote 100.0 4.8E-33 1.6E-37 262.1 27.4 246 217-501 8-284 (342)
112 4e54_B DNA damage-binding prot 100.0 2.3E-33 8E-38 273.0 26.0 257 143-454 146-431 (435)
113 3dw8_B Serine/threonine-protei 100.0 6.2E-33 2.1E-37 271.4 27.8 257 217-502 25-376 (447)
114 1l0q_A Surface layer protein; 100.0 4.7E-31 1.6E-35 253.3 35.5 266 172-501 3-277 (391)
115 4gq1_A NUP37; propeller, trans 100.0 2.3E-32 7.8E-37 262.0 23.2 255 219-497 88-387 (393)
116 3mmy_A MRNA export factor; mRN 100.0 3.5E-30 1.2E-34 244.9 32.0 247 215-501 34-306 (368)
117 1l0q_A Surface layer protein; 100.0 1.5E-29 5E-34 242.9 36.5 295 143-501 16-344 (391)
118 3vu4_A KMHSV2; beta-propeller 100.0 2.5E-30 8.6E-35 244.2 27.2 253 216-501 15-273 (355)
119 2j04_A TAU60, YPL007P, hypothe 100.0 4.7E-30 1.6E-34 245.9 29.1 243 157-441 83-349 (588)
120 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1E-29 3.6E-34 248.4 31.6 245 154-454 97-392 (450)
121 4gq1_A NUP37; propeller, trans 100.0 4.4E-31 1.5E-35 253.0 21.3 245 156-452 86-388 (393)
122 3f3f_A Nucleoporin SEH1; struc 100.0 5.8E-30 2E-34 241.3 25.9 258 150-454 48-338 (351)
123 3lrv_A PRE-mRNA-splicing facto 100.0 1.5E-30 5.1E-35 244.9 21.2 234 226-502 42-295 (343)
124 2w18_A PALB2, fancn, partner a 100.0 2.2E-29 7.4E-34 226.6 26.6 252 143-451 67-355 (356)
125 3bws_A Protein LP49; two-domai 100.0 4.7E-28 1.6E-32 235.7 32.3 241 154-453 164-432 (433)
126 2w18_A PALB2, fancn, partner a 100.0 9.1E-28 3.1E-32 216.1 28.1 273 162-497 42-355 (356)
127 1nir_A Nitrite reductase; hemo 100.0 8.7E-27 3E-31 231.2 34.5 300 143-502 163-517 (543)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.9E-27 1.3E-31 226.9 25.8 276 140-480 94-410 (415)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.4E-27 4.8E-32 229.9 21.3 280 159-500 62-388 (415)
130 1nir_A Nitrite reductase; hemo 100.0 2.1E-26 7.1E-31 228.5 28.9 281 166-503 144-462 (543)
131 2ecf_A Dipeptidyl peptidase IV 100.0 2.6E-26 9E-31 239.0 29.5 302 159-499 36-413 (741)
132 3u4y_A Uncharacterized protein 100.0 1.1E-25 3.8E-30 210.7 29.1 277 165-500 3-305 (331)
133 1ri6_A Putative isomerase YBHE 99.9 1.7E-25 5.8E-30 210.4 28.4 278 172-499 5-308 (343)
134 3vgz_A Uncharacterized protein 99.9 2.3E-24 7.8E-29 203.6 34.6 268 158-488 39-334 (353)
135 2ojh_A Uncharacterized protein 99.9 5.3E-25 1.8E-29 202.3 23.8 254 176-490 17-294 (297)
136 1xfd_A DIP, dipeptidyl aminope 99.9 3.4E-25 1.2E-29 230.0 22.8 281 160-499 17-393 (723)
137 1pby_B Quinohemoprotein amine 99.9 1.3E-24 4.6E-29 203.7 23.7 268 172-502 2-313 (337)
138 2z3z_A Dipeptidyl aminopeptida 99.9 1.9E-24 6.5E-29 223.7 27.0 277 160-501 82-437 (706)
139 2ecf_A Dipeptidyl peptidase IV 99.9 3.1E-24 1.1E-28 223.4 28.6 273 161-497 110-457 (741)
140 1xfd_A DIP, dipeptidyl aminope 99.9 6.4E-24 2.2E-28 220.5 29.3 294 143-490 41-432 (723)
141 1ri6_A Putative isomerase YBHE 99.9 2.3E-23 7.7E-28 195.8 26.9 268 156-480 34-335 (343)
142 1k32_A Tricorn protease; prote 99.9 1.3E-23 4.6E-28 226.0 27.1 280 151-498 195-501 (1045)
143 3u4y_A Uncharacterized protein 99.9 1.2E-22 4.1E-27 190.0 27.8 260 144-454 25-305 (331)
144 1jmx_B Amine dehydrogenase; ox 99.9 3.3E-23 1.1E-27 195.2 23.8 275 164-502 4-328 (349)
145 2z3z_A Dipeptidyl aminopeptida 99.9 3.8E-23 1.3E-27 214.0 24.6 295 162-500 28-392 (706)
146 1k32_A Tricorn protease; prote 99.9 2.4E-22 8.2E-27 216.3 30.7 309 158-501 294-639 (1045)
147 2oit_A Nucleoporin 214KDA; NH2 99.9 1E-21 3.4E-26 189.7 30.6 212 159-375 36-279 (434)
148 3hfq_A Uncharacterized protein 99.9 5.1E-22 1.8E-26 187.0 27.8 247 219-498 38-316 (347)
149 3o4h_A Acylamino-acid-releasin 99.9 7.9E-23 2.7E-27 206.5 23.4 276 158-498 20-314 (582)
150 3pe7_A Oligogalacturonate lyas 99.9 2.9E-22 1E-26 191.8 24.6 300 143-499 14-382 (388)
151 3vgz_A Uncharacterized protein 99.9 3.2E-21 1.1E-25 181.9 29.5 243 220-501 40-305 (353)
152 1pby_B Quinohemoprotein amine 99.9 7.7E-22 2.6E-26 184.8 24.6 237 161-454 35-311 (337)
153 3scy_A Hypothetical bacterial 99.9 4.3E-21 1.5E-25 181.7 29.9 276 170-498 12-336 (361)
154 2ojh_A Uncharacterized protein 99.9 4.4E-22 1.5E-26 182.7 21.5 235 153-444 35-293 (297)
155 1z68_A Fibroblast activation p 99.9 4.2E-22 1.4E-26 206.5 21.3 299 143-501 40-445 (719)
156 2oit_A Nucleoporin 214KDA; NH2 99.9 1.3E-20 4.4E-25 181.9 28.2 165 157-335 90-279 (434)
157 3hfq_A Uncharacterized protein 99.9 3.3E-20 1.1E-24 174.6 28.9 244 156-454 36-318 (347)
158 3scy_A Hypothetical bacterial 99.9 9.5E-20 3.2E-24 172.4 30.3 262 158-476 48-360 (361)
159 1z68_A Fibroblast activation p 99.9 3.9E-21 1.3E-25 199.3 20.0 274 163-499 19-391 (719)
160 3c5m_A Oligogalacturonate lyas 99.9 1.2E-20 4.1E-25 181.0 20.8 290 145-498 16-381 (396)
161 3o4h_A Acylamino-acid-releasin 99.8 1.8E-20 6.2E-25 189.2 18.0 230 220-497 21-274 (582)
162 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.7E-19 9.3E-24 169.4 24.9 248 221-500 40-342 (365)
163 4a5s_A Dipeptidyl peptidase 4 99.8 5.8E-19 2E-23 183.0 28.3 281 159-498 16-397 (740)
164 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.3E-18 4.3E-23 164.8 25.8 244 158-454 38-342 (365)
165 1jmx_B Amine dehydrogenase; ox 99.8 5.6E-19 1.9E-23 166.2 23.0 255 144-454 26-326 (349)
166 2oiz_A Aromatic amine dehydrog 99.8 4.6E-18 1.6E-22 160.1 26.1 274 170-500 14-335 (361)
167 3fvz_A Peptidyl-glycine alpha- 99.8 3.2E-17 1.1E-21 152.7 31.2 242 159-454 23-323 (329)
168 3pe7_A Oligogalacturonate lyas 99.8 2.2E-18 7.5E-23 164.8 23.6 239 226-502 41-332 (388)
169 3fvz_A Peptidyl-glycine alpha- 99.8 1.8E-17 6.1E-22 154.4 28.4 244 220-500 23-323 (329)
170 1q7f_A NHL, brain tumor CG1071 99.8 8.3E-17 2.9E-21 146.8 31.7 244 217-502 26-283 (286)
171 2dg1_A DRP35, lactonase; beta 99.8 6.4E-18 2.2E-22 157.9 24.6 275 159-488 5-300 (333)
172 1q7f_A NHL, brain tumor CG1071 99.8 2E-16 6.8E-21 144.3 33.9 246 156-454 26-281 (286)
173 2oiz_A Aromatic amine dehydrog 99.8 9.5E-18 3.3E-22 157.9 25.4 276 145-480 37-360 (361)
174 3azo_A Aminopeptidase; POP fam 99.8 5.8E-18 2E-22 173.7 25.4 291 152-496 16-364 (662)
175 2gop_A Trilobed protease; beta 99.8 5.5E-17 1.9E-21 152.5 28.3 256 160-498 15-330 (347)
176 4a5s_A Dipeptidyl peptidase 4 99.8 2.6E-18 9E-23 178.1 20.8 269 223-500 19-354 (740)
177 2z2n_A Virginiamycin B lyase; 99.8 1.4E-14 4.6E-19 132.9 38.4 277 157-498 12-294 (299)
178 3dsm_A Uncharacterized protein 99.8 6E-16 2E-20 143.8 28.8 264 179-498 15-301 (328)
179 3azo_A Aminopeptidase; POP fam 99.7 1.7E-16 5.9E-21 162.7 24.8 213 151-381 59-331 (662)
180 3c5m_A Oligogalacturonate lyas 99.7 6.1E-17 2.1E-21 155.1 18.8 239 222-502 37-332 (396)
181 2bkl_A Prolyl endopeptidase; m 99.7 5.1E-16 1.7E-20 159.8 26.0 244 218-501 118-399 (695)
182 1qks_A Cytochrome CD1 nitrite 99.7 5.3E-15 1.8E-19 146.2 31.0 312 169-501 165-540 (567)
183 3e5z_A Putative gluconolactona 99.7 1.7E-15 5.7E-20 138.9 25.6 240 151-454 19-287 (296)
184 2xdw_A Prolyl endopeptidase; a 99.7 1.8E-15 6.1E-20 156.2 28.8 241 157-455 122-416 (710)
185 2xdw_A Prolyl endopeptidase; a 99.7 5.9E-15 2E-19 152.3 32.4 244 218-501 122-416 (710)
186 3e5z_A Putative gluconolactona 99.7 4E-15 1.4E-19 136.4 27.8 225 218-490 25-278 (296)
187 2bkl_A Prolyl endopeptidase; m 99.7 4.3E-16 1.5E-20 160.3 23.4 240 157-454 118-398 (695)
188 1rwi_B Serine/threonine-protei 99.7 5.7E-15 2E-19 133.3 26.8 237 161-454 25-265 (270)
189 3sjl_D Methylamine dehydrogena 99.7 4.9E-15 1.7E-19 137.3 26.5 282 165-501 38-365 (386)
190 3no2_A Uncharacterized protein 99.7 7.2E-15 2.5E-19 132.4 26.4 249 170-473 4-271 (276)
191 2dg1_A DRP35, lactonase; beta 99.7 2E-15 6.9E-20 140.9 23.5 235 222-498 7-262 (333)
192 2mad_H Methylamine dehydrogena 99.7 9.4E-14 3.2E-18 130.7 33.6 280 166-503 27-354 (373)
193 2qc5_A Streptogramin B lactona 99.7 3.4E-13 1.2E-17 123.6 35.5 274 158-496 18-297 (300)
194 2gop_A Trilobed protease; beta 99.7 5.8E-15 2E-19 138.6 24.1 221 160-452 59-330 (347)
195 1rwi_B Serine/threonine-protei 99.7 1.5E-14 5E-19 130.6 25.0 238 222-501 25-266 (270)
196 3dsm_A Uncharacterized protein 99.7 8.1E-14 2.8E-18 129.4 27.8 232 160-452 44-301 (328)
197 3sjl_D Methylamine dehydrogena 99.6 2E-14 6.9E-19 133.1 21.8 275 145-478 65-384 (386)
198 1yr2_A Prolyl oligopeptidase; 99.6 5.2E-14 1.8E-18 145.8 26.1 242 219-501 161-443 (741)
199 3no2_A Uncharacterized protein 99.6 1.9E-13 6.5E-18 123.1 26.2 212 231-485 4-230 (276)
200 1yr2_A Prolyl oligopeptidase; 99.6 5.1E-14 1.7E-18 145.9 25.4 241 157-454 160-442 (741)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.7E-13 9.4E-18 125.2 27.5 238 222-499 19-299 (314)
202 3c75_H MADH, methylamine dehyd 99.6 1.3E-13 4.6E-18 130.1 24.4 278 169-502 82-405 (426)
203 2z2n_A Virginiamycin B lyase; 99.6 3.8E-12 1.3E-16 116.5 32.9 234 219-497 13-253 (299)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.5E-12 5.2E-17 120.1 29.5 242 157-454 15-300 (314)
205 3hrp_A Uncharacterized protein 99.6 1.7E-12 5.8E-17 123.9 28.0 248 220-496 130-407 (409)
206 2mad_H Methylamine dehydrogena 99.6 8.5E-12 2.9E-16 117.3 32.0 251 146-454 54-351 (373)
207 3hrp_A Uncharacterized protein 99.6 2.7E-12 9.4E-17 122.5 28.6 248 159-451 130-408 (409)
208 1xip_A Nucleoporin NUP159; bet 99.6 5E-13 1.7E-17 124.4 22.2 236 222-496 39-309 (388)
209 1qks_A Cytochrome CD1 nitrite 99.6 1.8E-12 6.2E-17 128.1 27.4 230 230-499 165-421 (567)
210 3g4e_A Regucalcin; six bladed 99.6 5.7E-12 2E-16 115.2 28.2 226 222-489 14-263 (297)
211 2qe8_A Uncharacterized protein 99.5 2.3E-12 7.9E-17 120.4 24.7 279 160-497 17-319 (343)
212 2qc5_A Streptogramin B lactona 99.5 6.1E-11 2.1E-15 108.4 33.4 234 220-497 19-258 (300)
213 1xip_A Nucleoporin NUP159; bet 99.5 3.2E-13 1.1E-17 125.7 17.7 179 161-360 39-229 (388)
214 3dr2_A Exported gluconolactona 99.5 3.4E-12 1.2E-16 117.2 24.4 229 152-444 37-298 (305)
215 3g4e_A Regucalcin; six bladed 99.5 2.1E-11 7.3E-16 111.4 26.6 225 158-442 11-261 (297)
216 2ghs_A AGR_C_1268P; regucalcin 99.5 4.9E-11 1.7E-15 110.5 28.7 224 223-490 51-294 (326)
217 3iuj_A Prolyl endopeptidase; h 99.5 5.3E-12 1.8E-16 129.5 24.3 238 157-454 126-406 (693)
218 3c75_H MADH, methylamine dehyd 99.5 3.9E-12 1.3E-16 120.1 21.3 253 146-454 106-403 (426)
219 1mda_H Methylamine dehydrogena 99.5 2.7E-12 9.3E-17 119.3 19.1 257 182-501 47-348 (368)
220 3iuj_A Prolyl endopeptidase; h 99.4 1.5E-11 5.1E-16 126.2 23.6 240 218-501 126-407 (693)
221 3dr2_A Exported gluconolactona 99.4 3E-11 1E-15 110.8 20.9 225 220-490 44-298 (305)
222 2ghs_A AGR_C_1268P; regucalcin 99.4 3.2E-10 1.1E-14 104.9 27.5 218 161-442 50-291 (326)
223 3q7m_A Lipoprotein YFGL, BAMB; 99.4 4.1E-10 1.4E-14 106.7 27.6 271 170-501 52-339 (376)
224 1mda_H Methylamine dehydrogena 99.4 1.2E-11 4E-16 115.0 15.6 267 144-477 51-366 (368)
225 2ece_A 462AA long hypothetical 99.3 4E-10 1.4E-14 105.0 24.8 236 230-486 93-399 (462)
226 3hxj_A Pyrrolo-quinoline quino 99.3 1.3E-10 4.6E-15 107.8 19.5 265 159-499 59-324 (330)
227 1yiq_A Quinohemoprotein alcoho 99.3 2.2E-10 7.4E-15 116.8 22.4 311 171-502 70-508 (689)
228 1yiq_A Quinohemoprotein alcoho 99.3 4.4E-10 1.5E-14 114.5 23.8 270 170-494 120-545 (689)
229 3q7m_A Lipoprotein YFGL, BAMB; 99.3 1.7E-09 6E-14 102.3 26.5 259 170-496 102-375 (376)
230 1fwx_A Nitrous oxide reductase 99.3 3.8E-10 1.3E-14 109.0 21.6 288 174-492 18-413 (595)
231 1kb0_A Quinohemoprotein alcoho 99.3 6.5E-10 2.2E-14 113.0 23.8 310 171-502 77-510 (677)
232 3hxj_A Pyrrolo-quinoline quino 99.3 6.7E-10 2.3E-14 103.0 22.0 219 171-454 107-325 (330)
233 2hz6_A Endoplasmic reticulum t 99.2 3.8E-12 1.3E-16 119.9 4.5 203 231-481 8-217 (369)
234 2hz6_A Endoplasmic reticulum t 99.2 3.5E-12 1.2E-16 120.1 3.3 185 170-382 8-200 (369)
235 1fwx_A Nitrous oxide reductase 99.2 5.9E-10 2E-14 107.7 18.6 186 169-374 99-361 (595)
236 1kb0_A Quinohemoprotein alcoho 99.2 3.4E-09 1.2E-13 107.7 22.7 263 170-487 127-540 (677)
237 1npe_A Nidogen, entactin; glyc 99.2 8.8E-08 3E-12 85.7 29.4 219 221-480 36-263 (267)
238 4a2l_A BT_4663, two-component 99.1 2.6E-07 9E-12 96.4 36.4 282 162-499 175-480 (795)
239 2qe8_A Uncharacterized protein 99.1 1.8E-09 6.1E-14 100.7 17.2 231 157-450 64-318 (343)
240 4a2l_A BT_4663, two-component 99.1 5E-07 1.7E-11 94.3 37.0 284 159-498 309-613 (795)
241 2ece_A 462AA long hypothetical 99.1 3.1E-08 1.1E-12 92.4 24.5 191 272-499 93-352 (462)
242 2iwa_A Glutamine cyclotransfer 99.1 6E-08 2.1E-12 85.0 23.5 209 253-499 10-237 (266)
243 1npe_A Nidogen, entactin; glyc 99.1 3.5E-07 1.2E-11 81.7 29.0 203 160-383 36-247 (267)
244 2iwa_A Glutamine cyclotransfer 99.1 6.4E-08 2.2E-12 84.8 23.1 192 161-375 22-238 (266)
245 1kv9_A Type II quinohemoprotei 99.0 6.4E-08 2.2E-12 98.3 24.8 312 171-502 66-491 (668)
246 3v9f_A Two-component system se 99.0 1.8E-06 6E-11 90.0 36.0 295 159-499 257-568 (781)
247 1kv9_A Type II quinohemoprotei 99.0 8.1E-08 2.8E-12 97.6 23.2 152 171-338 117-337 (668)
248 2fp8_A Strictosidine synthase; 99.0 6.4E-07 2.2E-11 82.5 27.4 255 160-454 19-314 (322)
249 3v9f_A Two-component system se 98.9 2.1E-06 7.1E-11 89.5 33.2 285 159-497 312-609 (781)
250 1flg_A Protein (quinoprotein e 98.9 8E-07 2.7E-11 88.4 27.2 156 171-338 117-359 (582)
251 3nol_A Glutamine cyclotransfer 98.9 9.4E-07 3.2E-11 76.4 23.7 195 253-488 32-244 (262)
252 3nok_A Glutaminyl cyclase; bet 98.9 5.3E-07 1.8E-11 77.9 21.5 194 253-485 44-252 (268)
253 2fp8_A Strictosidine synthase; 98.9 4.3E-07 1.5E-11 83.7 22.6 234 223-499 21-313 (322)
254 3nol_A Glutamine cyclotransfer 98.9 3.5E-07 1.2E-11 79.1 20.0 181 157-362 38-243 (262)
255 2ad6_A Methanol dehydrogenase 98.9 4.2E-07 1.4E-11 90.4 23.1 151 171-338 115-339 (571)
256 1k3i_A Galactose oxidase precu 98.9 6E-07 2.1E-11 91.3 24.5 275 164-490 190-533 (656)
257 2p4o_A Hypothetical protein; p 98.9 1.7E-05 5.7E-10 72.3 32.0 223 221-488 32-278 (306)
258 2ad6_A Methanol dehydrogenase 98.8 1.5E-06 5.1E-11 86.4 26.6 202 171-384 62-345 (571)
259 2xbg_A YCF48-like protein; pho 98.8 4.7E-05 1.6E-09 70.0 34.2 278 159-497 35-320 (327)
260 3mbr_X Glutamine cyclotransfer 98.8 4.6E-06 1.6E-10 71.5 24.7 195 253-485 10-221 (243)
261 1w6s_A Methanol dehydrogenase 98.8 9.5E-07 3.3E-11 87.7 23.5 203 171-383 62-351 (599)
262 1w6s_A Methanol dehydrogenase 98.8 1.6E-06 5.5E-11 86.1 24.6 158 165-338 111-346 (599)
263 2xe4_A Oligopeptidase B; hydro 98.8 9.8E-07 3.3E-11 91.1 23.7 193 157-370 170-394 (751)
264 3mbr_X Glutamine cyclotransfer 98.8 1E-05 3.4E-10 69.4 25.3 158 221-384 21-189 (243)
265 3nok_A Glutaminyl cyclase; bet 98.8 2.2E-06 7.4E-11 74.1 20.9 155 223-383 57-219 (268)
266 2p4o_A Hypothetical protein; p 98.7 1.4E-05 4.9E-10 72.7 27.1 194 160-377 32-244 (306)
267 1flg_A Protein (quinoprotein e 98.7 4.2E-06 1.5E-10 83.2 24.6 202 171-384 68-365 (582)
268 3qqz_A Putative uncharacterize 98.7 2.3E-05 7.7E-10 68.3 24.9 200 154-372 21-251 (255)
269 3v64_C Agrin; beta propeller, 98.6 0.00027 9.2E-09 65.5 31.9 236 159-454 33-276 (349)
270 3tc9_A Hypothetical hydrolase; 98.6 3.6E-05 1.2E-09 73.6 26.2 153 160-334 137-301 (430)
271 2ism_A Putative oxidoreductase 98.5 5.2E-05 1.8E-09 70.4 25.2 249 222-490 32-337 (352)
272 4hw6_A Hypothetical protein, I 98.5 7.1E-05 2.4E-09 71.6 26.5 251 160-452 139-432 (433)
273 3v65_B Low-density lipoprotein 98.5 0.00053 1.8E-08 64.5 31.8 234 161-454 78-319 (386)
274 3p5b_L Low density lipoprotein 98.5 0.00088 3E-08 63.3 33.7 226 172-454 84-321 (400)
275 1ijq_A LDL receptor, low-densi 98.5 0.00073 2.5E-08 61.6 31.9 225 234-501 3-240 (316)
276 2xe4_A Oligopeptidase B; hydro 98.4 5.3E-05 1.8E-09 78.2 25.3 150 222-374 175-354 (751)
277 2xbg_A YCF48-like protein; pho 98.4 0.00049 1.7E-08 63.1 29.3 193 159-376 79-280 (327)
278 1k3i_A Galactose oxidase precu 98.4 6E-06 2E-10 84.0 17.9 245 225-499 190-497 (656)
279 3s94_A LRP-6, low-density lipo 98.4 0.0011 3.9E-08 66.2 33.9 209 157-383 37-252 (619)
280 1ijq_A LDL receptor, low-densi 98.4 0.00091 3.1E-08 61.0 34.5 225 173-454 3-239 (316)
281 3tc9_A Hypothetical hydrolase; 98.4 0.00011 3.7E-09 70.2 25.0 150 222-374 138-301 (430)
282 3p5b_L Low density lipoprotein 98.4 0.00087 3E-08 63.3 30.8 208 157-382 109-328 (400)
283 3a9g_A Putative uncharacterize 98.4 0.00046 1.6E-08 63.9 27.9 245 222-485 30-329 (354)
284 3sov_A LRP-6, low-density lipo 98.4 0.00025 8.7E-09 64.6 25.5 206 160-383 35-247 (318)
285 3qqz_A Putative uncharacterize 98.3 0.0012 3.9E-08 57.5 27.8 202 218-450 24-250 (255)
286 3v65_B Low-density lipoprotein 98.3 0.00031 1.1E-08 66.1 25.6 206 159-383 115-327 (386)
287 3v64_C Agrin; beta propeller, 98.3 0.00059 2E-08 63.2 26.9 206 159-383 72-284 (349)
288 4hw6_A Hypothetical protein, I 98.3 0.00036 1.2E-08 66.6 25.6 249 221-497 139-431 (433)
289 2p9w_A MAL S 1 allergenic prot 98.3 0.00049 1.7E-08 61.6 23.4 163 260-454 10-216 (334)
290 3ei3_A DNA damage-binding prot 98.2 0.0051 1.7E-07 66.0 35.0 184 159-361 553-754 (1158)
291 3m0c_C LDL receptor, low-densi 98.2 0.005 1.7E-07 63.2 33.5 161 220-380 423-595 (791)
292 3kya_A Putative phosphatase; s 98.2 0.0025 8.4E-08 61.1 28.6 260 161-454 140-476 (496)
293 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0069 2.4E-07 60.6 35.5 205 159-383 36-246 (628)
294 3sov_A LRP-6, low-density lipo 98.2 0.0037 1.3E-07 56.9 29.8 219 180-454 12-239 (318)
295 2g8s_A Glucose/sorbosone dehyd 98.2 0.0013 4.5E-08 60.9 25.6 260 222-492 19-347 (353)
296 3m0c_C LDL receptor, low-densi 98.2 0.0013 4.5E-08 67.5 27.4 209 157-383 421-641 (791)
297 3amr_A 3-phytase; beta-propell 98.1 0.00065 2.2E-08 61.4 21.5 185 273-498 39-262 (355)
298 3kya_A Putative phosphatase; s 98.1 0.0057 1.9E-07 58.6 27.5 253 222-500 140-476 (496)
299 2ism_A Putative oxidoreductase 98.1 0.0025 8.4E-08 59.0 24.7 147 159-323 30-221 (352)
300 1n7d_A LDL receptor, low-densi 98.1 6E-05 2E-09 76.8 14.9 206 160-383 406-623 (699)
301 3s94_A LRP-6, low-density lipo 98.0 0.019 6.3E-07 57.5 32.3 158 160-337 84-246 (619)
302 2p9w_A MAL S 1 allergenic prot 98.0 0.0084 2.9E-07 53.7 25.1 152 223-374 15-215 (334)
303 1n7d_A LDL receptor, low-densi 98.0 8.1E-05 2.8E-09 75.8 13.7 155 221-375 406-572 (699)
304 4a0p_A LRP6, LRP-6, low-densit 97.9 0.021 7.2E-07 57.2 34.1 186 173-377 8-200 (628)
305 3amr_A 3-phytase; beta-propell 97.9 0.0037 1.3E-07 56.6 22.6 191 170-384 39-274 (355)
306 2g8s_A Glucose/sorbosone dehyd 97.8 0.018 6.1E-07 53.2 25.5 150 160-323 18-216 (353)
307 2vpj_A Kelch-like protein 12; 97.7 0.011 3.7E-07 53.3 22.9 143 231-377 62-234 (301)
308 3sre_A PON1, serum paraoxonase 97.7 0.027 9.1E-07 51.6 26.4 193 264-497 51-296 (355)
309 2xzh_A Clathrin heavy chain 1; 97.7 0.027 9.1E-07 50.1 28.7 222 179-454 47-291 (365)
310 2vpj_A Kelch-like protein 12; 97.6 0.013 4.4E-07 52.8 21.8 142 231-376 14-186 (301)
311 3a9g_A Putative uncharacterize 97.6 0.05 1.7E-06 50.2 27.5 145 160-323 29-216 (354)
312 3das_A Putative oxidoreductase 97.6 0.047 1.6E-06 49.8 30.7 251 221-490 32-330 (347)
313 2xzh_A Clathrin heavy chain 1; 97.5 0.042 1.4E-06 48.8 29.7 197 165-385 72-301 (365)
314 2xn4_A Kelch-like protein 2; s 97.5 0.023 8E-07 51.1 21.6 141 232-376 16-184 (302)
315 3ii7_A Kelch-like protein 7; p 97.5 0.039 1.3E-06 49.7 22.9 141 232-376 12-180 (306)
316 3ott_A Two-component system se 97.5 0.13 4.5E-06 53.1 33.9 280 161-500 104-402 (758)
317 3ott_A Two-component system se 97.5 0.14 4.6E-06 53.0 36.3 281 159-496 145-445 (758)
318 1bpo_A Protein (clathrin); cla 97.5 0.068 2.3E-06 49.5 29.5 224 180-454 47-290 (494)
319 3ii7_A Kelch-like protein 7; p 97.4 0.076 2.6E-06 47.8 24.0 142 231-376 55-227 (306)
320 1tl2_A L10, protein (tachylect 97.3 0.008 2.7E-07 50.1 14.4 137 222-365 42-201 (236)
321 1bpo_A Protein (clathrin); cla 97.3 0.11 3.8E-06 48.2 27.6 197 164-384 70-299 (494)
322 2xn4_A Kelch-like protein 2; s 97.3 0.091 3.1E-06 47.1 25.3 142 231-376 61-231 (302)
323 2be1_A Serine/threonine-protei 97.3 0.005 1.7E-07 55.9 13.9 140 232-371 10-181 (339)
324 1tl2_A L10, protein (tachylect 97.3 0.0063 2.1E-07 50.7 13.0 177 274-485 4-199 (236)
325 3sre_A PON1, serum paraoxonase 97.3 0.014 4.7E-07 53.5 16.7 156 307-499 52-252 (355)
326 1cru_A Protein (soluble quinop 97.2 0.17 5.7E-06 48.4 26.2 100 222-321 28-160 (454)
327 4asc_A Kelch repeat and BTB do 97.2 0.089 3E-06 47.6 21.8 144 229-376 43-223 (315)
328 2be1_A Serine/threonine-protei 97.0 0.0087 3E-07 54.3 13.0 192 172-379 11-236 (339)
329 1zgk_A Kelch-like ECH-associat 97.0 0.18 6.1E-06 45.4 23.0 142 231-376 70-242 (308)
330 1zgk_A Kelch-like ECH-associat 97.0 0.17 5.8E-06 45.5 21.4 142 231-376 24-195 (308)
331 1cru_A Protein (soluble quinop 97.0 0.13 4.4E-06 49.2 21.2 57 303-359 25-95 (454)
332 3ei3_A DNA damage-binding prot 96.9 0.6 2E-05 50.3 32.6 175 285-500 808-1000(1158)
333 4asc_A Kelch repeat and BTB do 96.9 0.21 7.1E-06 45.1 21.4 138 234-376 7-176 (315)
334 3pbp_A Nucleoporin NUP82; beta 96.9 0.081 2.8E-06 49.0 17.8 149 271-449 29-208 (452)
335 3pbp_A Nucleoporin NUP82; beta 96.9 0.091 3.1E-06 48.7 17.9 151 323-492 39-205 (452)
336 3das_A Putative oxidoreductase 96.8 0.28 9.7E-06 44.7 29.4 156 153-323 25-220 (347)
337 2woz_A Kelch repeat and BTB do 96.8 0.3 1E-05 44.1 22.3 143 229-376 54-233 (318)
338 1xi4_A Clathrin heavy chain; a 96.7 0.12 4E-06 55.5 19.5 200 225-454 70-290 (1630)
339 2uvk_A YJHT; unknown function, 96.5 0.39 1.3E-05 44.2 20.7 52 231-283 65-128 (357)
340 1xi4_A Clathrin heavy chain; a 96.4 0.22 7.5E-06 53.6 19.3 193 166-382 72-297 (1630)
341 2zwa_A Leucine carboxyl methyl 96.3 0.5 1.7E-05 48.0 21.5 147 230-376 396-579 (695)
342 3qhy_B Beta-lactamase inhibito 96.2 0.57 1.9E-05 41.4 20.9 182 161-374 25-207 (282)
343 3s25_A Hypothetical 7-bladed b 96.0 0.76 2.6E-05 41.0 22.1 135 230-378 23-180 (302)
344 2woz_A Kelch repeat and BTB do 95.9 0.93 3.2E-05 40.8 22.1 139 234-376 18-186 (318)
345 2uvk_A YJHT; unknown function, 95.4 1.6 5.3E-05 40.0 19.0 65 231-297 19-99 (357)
346 3qhy_B Beta-lactamase inhibito 95.1 1.7 5.7E-05 38.4 18.4 184 160-375 63-247 (282)
347 2zwa_A Leucine carboxyl methyl 95.0 1.6 5.5E-05 44.3 18.9 146 231-377 451-638 (695)
348 2wg3_C Hedgehog-interacting pr 94.1 4.2 0.00014 38.8 27.6 100 222-321 15-155 (463)
349 3b7f_A Glycosyl hydrolase, BNR 93.9 4.1 0.00014 37.8 27.6 142 221-365 55-254 (394)
350 3sbq_A Nitrous-oxide reductase 93.6 5.6 0.00019 38.4 21.2 71 304-374 322-408 (638)
351 3s25_A Hypothetical 7-bladed b 92.3 5.8 0.0002 35.2 26.9 138 225-375 57-217 (302)
352 3b7f_A Glycosyl hydrolase, BNR 92.2 7.3 0.00025 36.1 25.0 98 232-331 22-144 (394)
353 4hvt_A Ritya.17583.B, post-pro 92.1 11 0.00038 38.1 22.7 237 223-498 131-429 (711)
354 2wg3_C Hedgehog-interacting pr 91.7 9.4 0.00032 36.3 27.4 116 160-282 14-158 (463)
355 3sbq_A Nitrous-oxide reductase 91.5 11 0.00036 36.6 24.2 103 174-282 73-196 (638)
356 4gq2_M Nucleoporin NUP120; bet 86.7 15 0.00052 38.6 15.6 31 424-454 237-267 (950)
357 4hvt_A Ritya.17583.B, post-pro 86.1 31 0.0011 34.9 20.5 196 161-375 130-382 (711)
358 4gq2_M Nucleoporin NUP120; bet 84.3 5.6 0.00019 41.9 10.9 39 220-258 235-273 (950)
359 3f7f_A Nucleoporin NUP120; nuc 81.7 13 0.00044 37.2 11.6 37 221-259 222-258 (729)
360 3zwu_A Alkaline phosphatase PH 80.5 6.6 0.00023 38.5 9.1 62 425-486 478-549 (592)
361 4fhn_B Nucleoporin NUP120; pro 74.5 33 0.0011 37.1 13.3 37 264-300 239-275 (1139)
362 4a9v_A PHOX; hydrolase, beta-p 73.9 17 0.00057 35.4 9.5 63 424-488 477-551 (592)
363 1suu_A DNA gyrase subunit A; t 72.6 51 0.0018 29.2 25.3 193 169-374 6-231 (312)
364 3no0_A DNA gyrase subunit A; D 72.5 48 0.0016 28.8 20.8 152 220-374 23-196 (276)
365 3no0_A DNA gyrase subunit A; D 70.9 52 0.0018 28.6 19.7 157 159-332 67-244 (276)
366 3uc1_A DNA gyrase subunit A; D 69.0 64 0.0022 28.8 23.7 152 220-373 41-227 (327)
367 3l6v_A GYRA, DNA gyrase subuni 67.4 75 0.0025 29.0 25.3 144 229-374 4-180 (370)
368 3q6k_A 43.2 kDa salivary prote 66.8 78 0.0027 29.0 23.2 88 158-258 85-197 (381)
369 3q6k_A 43.2 kDa salivary prote 66.8 78 0.0027 29.0 22.4 216 219-485 85-341 (381)
370 3f7f_A Nucleoporin NUP120; nuc 66.4 48 0.0016 33.3 11.1 32 352-383 228-259 (729)
371 3uc1_A DNA gyrase subunit A; D 66.2 73 0.0025 28.5 22.7 152 221-374 95-279 (327)
372 4fhn_B Nucleoporin NUP120; pro 65.5 14 0.00047 40.0 7.9 38 221-258 238-275 (1139)
373 3zwu_A Alkaline phosphatase PH 60.8 28 0.00096 34.2 8.4 59 222-280 477-548 (592)
374 4a9v_A PHOX; hydrolase, beta-p 57.0 51 0.0017 32.1 9.2 18 424-441 532-549 (592)
375 1zi0_A DNA gyrase subunit A; b 51.4 1.3E+02 0.0044 26.5 27.4 191 169-372 1-224 (307)
376 2ayu_A Nucleosome assembly pro 50.6 1.7 5.8E-05 40.2 -1.9 6 23-28 309-314 (417)
377 1suu_A DNA gyrase subunit A; t 49.2 1.4E+02 0.0048 26.4 26.4 193 230-453 6-231 (312)
378 3l6v_A GYRA, DNA gyrase subuni 41.0 2.1E+02 0.0071 26.0 27.5 154 167-333 3-179 (370)
379 1sqj_A OXG-RCBH, oligoxylogluc 39.8 3.2E+02 0.011 27.9 25.7 61 220-281 14-83 (789)
380 3kci_A Probable E3 ubiquitin-p 39.1 2.2E+02 0.0077 25.8 28.9 148 223-373 55-240 (389)
381 3hx6_A Type 4 fimbrial biogene 35.6 3.2E+02 0.011 26.5 16.1 164 171-335 85-285 (570)
382 1wp5_A Topoisomerase IV; broke 34.1 2.5E+02 0.0085 24.9 27.2 187 169-372 3-223 (323)
383 1olz_A Semaphorin 4D; developm 30.4 77 0.0026 31.6 6.1 67 425-492 399-475 (663)
384 1zi0_A DNA gyrase subunit A; b 30.2 2.8E+02 0.0096 24.3 25.7 192 230-452 1-225 (307)
385 1wp5_A Topoisomerase IV; broke 29.9 2.9E+02 0.01 24.4 25.0 152 221-373 92-276 (323)
386 1q47_A Semaphorin 3A; beta pro 27.6 1.1E+02 0.0036 29.3 6.3 69 424-493 405-486 (495)
387 1zvt_A Topoisomerase IV subuni 27.3 2.9E+02 0.0098 23.5 14.8 139 234-374 4-163 (256)
388 3mvd_K Regulator of chromosome 26.4 3.8E+02 0.013 24.6 28.7 105 222-332 76-205 (423)
389 3kci_A Probable E3 ubiquitin-p 26.2 3.7E+02 0.013 24.4 27.9 149 222-373 106-292 (389)
390 3mez_A Mannose-specific lectin 25.2 1.9E+02 0.0064 20.7 9.2 23 309-331 53-75 (111)
391 3mez_B Mannose-specific lectin 24.8 1.9E+02 0.0066 20.7 10.4 24 309-333 60-83 (113)
392 3al9_A Plexin-A2; beta-propell 23.6 95 0.0032 30.1 5.2 67 424-491 401-473 (539)
393 2kmw_A Uncharacterized protein 23.4 1.4E+02 0.005 22.9 5.3 7 22-28 83-89 (150)
394 4gz8_A Semaphorin-3A; multi-do 22.8 1.5E+02 0.005 29.6 6.5 67 425-492 414-493 (667)
395 1zvt_A Topoisomerase IV subuni 22.7 3.5E+02 0.012 22.9 15.9 111 222-334 34-163 (256)
396 4h3o_A Lectin; cadmium, plant 21.8 2.1E+02 0.0073 20.1 10.3 22 309-331 54-75 (105)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.3e-48 Score=375.38 Aligned_cols=287 Identities=25% Similarity=0.432 Sum_probs=260.0
Q ss_pred chhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC
Q 010296 151 EFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS 230 (513)
Q Consensus 151 ~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 230 (513)
....+.+|.++|++++|+|++.+|++|+.||+|+|||+.++.....+ .+|...|++++|+|
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l-------------------~~h~~~V~~v~~~~ 160 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL-------------------KGHTDSVQDISFDH 160 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEE-------------------CCCSSCEEEEEECT
T ss_pred ceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEE-------------------eccCCcEEEEEEcC
Confidence 34568899999999999999999999999999999999998876654 68999999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEE
Q 010296 231 DGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTI 310 (513)
Q Consensus 231 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 310 (513)
++++|++|+.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.|++|++||+.++.++..+.+|...|.++
T Consensus 161 ~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~ 240 (410)
T 1vyh_C 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240 (410)
T ss_dssp TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCCe-EEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecC--------------------C-eEEEEeCCCCE
Q 010296 311 DCLRKER-VLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISN--------------------D-EFLSGSDDGSI 367 (513)
Q Consensus 311 ~~~~~~~-~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~--------------------~-~~~~~~~dg~i 367 (513)
.+++++. +++++.|+.|++||+.+.... .+..|...|.+++|+|+ + .+++|+.|+.|
T Consensus 241 ~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i 320 (410)
T 1vyh_C 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320 (410)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeE
Confidence 9999885 558999999999999887765 56788899999999985 3 48899999999
Q ss_pred EEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEE
Q 010296 368 ELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVR 447 (513)
Q Consensus 368 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~ 447 (513)
++||+.++.++..+.. |..+|++++|+|++++|++|+.||.|+
T Consensus 321 ~iwd~~~~~~~~~~~~-------------------------------------h~~~v~~v~~~~~g~~l~s~s~D~~i~ 363 (410)
T 1vyh_C 321 KMWDVSTGMCLMTLVG-------------------------------------HDNWVRGVLFHSGGKFILSCADDKTLR 363 (410)
T ss_dssp EEEETTTTEEEEEEEC-------------------------------------CSSCEEEEEECSSSSCEEEEETTTEEE
T ss_pred EEEECCCCceEEEEEC-------------------------------------CCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 9999999998887743 334599999999999999999999999
Q ss_pred EEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCccccccc
Q 010296 448 LWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGH 497 (513)
Q Consensus 448 vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~ 497 (513)
|||+.++ ..+..+.. |...|++++|+|++.+|+++ +.||+|++|+.
T Consensus 364 vwd~~~~-~~~~~~~~--h~~~v~~l~~~~~~~~l~sg-s~D~~i~vW~~ 409 (410)
T 1vyh_C 364 VWDYKNK-RCMKTLNA--HEHFVTSLDFHKTAPYVVTG-SVDQTVKVWEC 409 (410)
T ss_dssp EECCTTS-CCCEEEEC--CSSCEEEEEECSSSSCEEEE-ETTSEEEEEC-
T ss_pred EEECCCC-ceEEEEcC--CCCcEEEEEEcCCCCEEEEE-eCCCcEEEEeC
Confidence 9999876 44455543 78899999999999999999 99999999985
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.5e-47 Score=356.10 Aligned_cols=288 Identities=24% Similarity=0.412 Sum_probs=254.0
Q ss_pred cchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEc
Q 010296 150 DEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVS 229 (513)
Q Consensus 150 ~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 229 (513)
...+.+.+|.+.|++++|+|++++|++|+.||+|+|||+.++..+..+ ..|...|.+++|+
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~-------------------~~~~~~v~~~~~s 106 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAI-------------------PLRSSWVMTCAYA 106 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEE-------------------ECSSSCEEEEEEC
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEe-------------------ecCCccEEEEEEC
Confidence 445678899999999999999999999999999999999988876644 5678889999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCc----ceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccC
Q 010296 230 SDGRYLASGGLDRHIHLWDTRIQ----EHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQS 305 (513)
Q Consensus 230 ~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 305 (513)
|++++|++|+.|+.|++|++.+. .....+.+|...|.++.|++++. |++++.|++|++||+.+++.+..+.+|..
T Consensus 107 ~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~ 185 (340)
T 1got_B 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTG 185 (340)
T ss_dssp TTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCC
Confidence 99999999999999999999865 35567788999999999998764 88999999999999999999999999999
Q ss_pred CeEEEEeeCCCe-EEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEee
Q 010296 306 EVLTIDCLRKER-VLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVK 382 (513)
Q Consensus 306 ~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~ 382 (513)
.|.+++|+|++. +++++.|+.|++||++++... .+..|...|.+++|+|++. |++|+.||+|++||+++++.+..+.
T Consensus 186 ~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 265 (340)
T 1got_B 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 999999999875 558999999999999987765 6778889999999999985 8899999999999999988776654
Q ss_pred cCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeee
Q 010296 383 NAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLY 462 (513)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~ 462 (513)
.. .+...|++++|+|++++|++|+.||.|+|||+.+. ..+..+.
T Consensus 266 ~~-----------------------------------~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~-~~~~~~~ 309 (340)
T 1got_B 266 HD-----------------------------------NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA-DRAGVLA 309 (340)
T ss_dssp CT-----------------------------------TCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEEEE
T ss_pred cC-----------------------------------CcccceEEEEECCCCCEEEEECCCCeEEEEEcccC-cEeeEee
Confidence 21 11223999999999999999999999999999887 3444444
Q ss_pred ecCcccEEEEEEeecCCCEEEEEecCCCcccccc
Q 010296 463 NLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWG 496 (513)
Q Consensus 463 ~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~ 496 (513)
.|.+.|++++|+|+|.+|+++ +.|+.|++|+
T Consensus 310 --~h~~~v~~~~~s~dg~~l~s~-s~D~~i~iWd 340 (340)
T 1got_B 310 --GHDNRVSCLGVTDDGMAVATG-SWDSFLKIWN 340 (340)
T ss_dssp --CCSSCEEEEEECTTSSCEEEE-ETTSCEEEEC
T ss_pred --cCCCcEEEEEEcCCCCEEEEE-cCCccEEecC
Confidence 388999999999999999999 8999999996
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.8e-47 Score=354.07 Aligned_cols=289 Identities=17% Similarity=0.281 Sum_probs=254.9
Q ss_pred chhhhhccCCCeEEEEECCC----CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEE
Q 010296 151 EFRVLLKHRQSVTAVALSED----DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILAL 226 (513)
Q Consensus 151 ~~~~~~~h~~~V~~~~~s~~----~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 226 (513)
.++.+.+|.+.|++++|+|+ +.+|+||+.|++|+||++..+...... .+.+|...|.++
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~-----------------~l~gh~~~v~~~ 86 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQW-----------------SLEGHQLGVVSV 86 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEE-----------------EECCCSSCEEEE
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeee-----------------eeccCCCCEEEE
Confidence 34567799999999999985 678999999999999999876543211 246899999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCC
Q 010296 227 AVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSE 306 (513)
Q Consensus 227 ~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 306 (513)
+|++++.++++++.|++|++||+.+++.+..+..|...+.+++|+|++++|++++.+|.|++|++.+++....+..+...
T Consensus 87 ~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~ 166 (321)
T 3ow8_A 87 DISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKF 166 (321)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSC
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred eEEEEeeCCCe-EEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEeec
Q 010296 307 VLTIDCLRKER-VLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVKN 383 (513)
Q Consensus 307 v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~ 383 (513)
|.+++|+|++. +++++.|+.|++||+.+++.+ .+..|...|.+++|+|++. |++++.|+.|+|||+.+++.+..+.
T Consensus 167 v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~- 245 (321)
T 3ow8_A 167 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS- 245 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC-
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc-
Confidence 99999999885 558899999999999988776 5667888999999999986 7799999999999999998877763
Q ss_pred CCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeee
Q 010296 384 AHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYN 463 (513)
Q Consensus 384 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~ 463 (513)
.|..+|.+++|+|++++|++|+.||+|+|||+.++ ..+..+.
T Consensus 246 ------------------------------------~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~-~~~~~~~- 287 (321)
T 3ow8_A 246 ------------------------------------GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR-TCVHTFF- 287 (321)
T ss_dssp ------------------------------------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEEC-
T ss_pred ------------------------------------CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-EEEEEEc-
Confidence 34455999999999999999999999999999887 4444443
Q ss_pred cCcccEEEEEEeecCCCEEEEEecCCCccccccc
Q 010296 464 LPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGH 497 (513)
Q Consensus 464 ~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~ 497 (513)
.|...|.+++|+|++++|+++ +.||.|++|+.
T Consensus 288 -~h~~~v~~v~~s~~g~~l~s~-~~d~~i~vwd~ 319 (321)
T 3ow8_A 288 -DHQDQVWGVKYNGNGSKIVSV-GDDQEIHIYDC 319 (321)
T ss_dssp -CCSSCEEEEEECTTSSEEEEE-ETTCCEEEEEC
T ss_pred -CCCCcEEEEEECCCCCEEEEE-eCCCeEEEEeC
Confidence 378899999999999999999 89999999986
No 4
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.4e-46 Score=350.93 Aligned_cols=289 Identities=21% Similarity=0.376 Sum_probs=252.4
Q ss_pred cchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEc
Q 010296 150 DEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVS 229 (513)
Q Consensus 150 ~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 229 (513)
...+.+.+|.+.|++++|+|++++|+||+.||+|+|||..++.....+ ..|...|.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~-------------------~~~~~~v~~~~~s 115 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAV-------------------TMPCTWVMACAYA 115 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-------------------ECSSSCCCEEEEC
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEE-------------------ecCCCCEEEEEEC
Confidence 456778999999999999999999999999999999999888766543 4567789999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCc------ceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecc
Q 010296 230 SDGRYLASGGLDRHIHLWDTRIQ------EHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGH 303 (513)
Q Consensus 230 ~~~~~l~s~~~dg~i~vwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 303 (513)
|++.+|++|+.|+.+++|++... .....+.+|...|.+++|+|++..|++++.|++|++||+.+++++..+.+|
T Consensus 116 p~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h 195 (354)
T 2pbi_B 116 PSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGH 195 (354)
T ss_dssp TTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCC
Confidence 99999999999999999998643 334566789999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEeeCC--C-eEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCee
Q 010296 304 QSEVLTIDCLRK--E-RVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPV 378 (513)
Q Consensus 304 ~~~v~~~~~~~~--~-~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~ 378 (513)
...|.++.++|. + .+++++.|+.|++||++++... .+..|...|.+++|+|++. |++++.|++|++||+++++.+
T Consensus 196 ~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 196 GADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREV 275 (354)
T ss_dssp SSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 999999999873 3 6779999999999999988766 5677889999999999885 889999999999999988776
Q ss_pred EEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcce
Q 010296 379 YIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDI 458 (513)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~ 458 (513)
..+.... +...+++++|+|++++|++|+.|+.|+|||+.++ ..+
T Consensus 276 ~~~~~~~-----------------------------------~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~-~~~ 319 (354)
T 2pbi_B 276 AIYSKES-----------------------------------IIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKG-SRV 319 (354)
T ss_dssp EEECCTT-----------------------------------CCSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-SEE
T ss_pred EEEcCCC-----------------------------------cccceeEEEEeCCCCEEEEEECCCcEEEEECCCC-ceE
Confidence 6554211 1123899999999999999999999999999887 334
Q ss_pred eeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccc
Q 010296 459 QPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWG 496 (513)
Q Consensus 459 ~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~ 496 (513)
..+. .|.+.|++++|+|+|++|+++ +.|++|++|+
T Consensus 320 ~~l~--~h~~~v~~l~~spdg~~l~sg-s~D~~v~vW~ 354 (354)
T 2pbi_B 320 SILF--GHENRVSTLRVSPDGTAFCSG-SWDHTLRVWA 354 (354)
T ss_dssp EEEC--CCSSCEEEEEECTTSSCEEEE-ETTSEEEEEC
T ss_pred EEEE--CCCCcEEEEEECCCCCEEEEE-cCCCCEEecC
Confidence 4443 488999999999999999999 9999999995
No 5
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.5e-46 Score=352.25 Aligned_cols=291 Identities=17% Similarity=0.220 Sum_probs=234.0
Q ss_pred hhccCCCeEEEEECCCCCeEEEEeC------CceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE
Q 010296 155 LLKHRQSVTAVALSEDDSKGFSASK------DGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV 228 (513)
Q Consensus 155 ~~~h~~~V~~~~~s~~~~~l~t~~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 228 (513)
..+|...|++++|+|||++|++|+. |+.|++|+..++.....+ ......|...|++++|
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~---------------~~~~~~~~~~V~~~~~ 102 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESL---------------CTAGVQTEAGVTDVAW 102 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGG---------------CSEEEECSSCEEEEEE
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeE---------------ecccCCCCCCEEEEEE
Confidence 3579999999999999999999997 788999998877654432 0122468888999999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCcceeee----ccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeeccc
Q 010296 229 SSDGRYLASGGLDRHIHLWDTRIQEHIQA----FPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQ 304 (513)
Q Consensus 229 s~~~~~l~s~~~dg~i~vwd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 304 (513)
+|++. +++++.||+|+|||+.+++.... ..+|...|++++|+|++++|++++.|+.|++||+.+++++..+.+|.
T Consensus 103 s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~ 181 (357)
T 4g56_B 103 VSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHS 181 (357)
T ss_dssp ETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred cCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC
Confidence 99986 55677899999999988875433 34799999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeeCCC--eEEEEeCCCcEEEEecCCCeeeE---EecCCCCeeEEEeecCC--eEEEEeCCCCEEEEecCCCCe
Q 010296 305 SEVLTIDCLRKE--RVLTVGRDRSMQLWKVPEESRLV---FRAPASSLECCCFISND--EFLSGSDDGSIELWSLLRKKP 377 (513)
Q Consensus 305 ~~v~~~~~~~~~--~~~~~~~d~~i~iwd~~~~~~~~---~~~~~~~v~~~~~~~~~--~~~~~~~dg~i~iwd~~~~~~ 377 (513)
..|.+++|++++ .+++++.|+.|++||++++.... ...+...+.+++|+|++ .|++|+.|+.|++||++++++
T Consensus 182 ~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~ 261 (357)
T 4g56_B 182 SEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS 261 (357)
T ss_dssp SCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG
T ss_pred CCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE
Confidence 999999999865 57799999999999998876552 33456779999999975 377899999999999999988
Q ss_pred eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCC-CEEEEecCCCcEEEEEeCCCCc
Q 010296 378 VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGS-DLAASGAGNGSVRLWAIESETK 456 (513)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~g~~dg~v~vwd~~~~~~ 456 (513)
+..+.. |...|++++|+|++ ++|++|+.||+|+|||+.++ +
T Consensus 262 ~~~~~~-------------------------------------~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-~ 303 (357)
T 4g56_B 262 AQTSAV-------------------------------------HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-E 303 (357)
T ss_dssp CEEECC-------------------------------------CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC-E
T ss_pred eEEEec-------------------------------------cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC-c
Confidence 887743 33449999999987 68999999999999999887 3
Q ss_pred ceeeeeecCcccEEEEEEeec-CCCEEEEEecCCCcccccccCCCccc
Q 010296 457 DIQPLYNLPLVGFVNSLAFAK-SGQFLIAGVGQEPRLGRWGHLPAARN 503 (513)
Q Consensus 457 ~~~~~~~~~~~~~v~~v~~sp-~~~~l~~~~~~dg~v~~W~~~~~~~~ 503 (513)
.+....|.+.|++|+|+| ++.+|+++ +.||+|++|++....+.
T Consensus 304 ---~~~~~~H~~~V~~vafsP~d~~~l~s~-s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 304 ---VFRDLSHRDFVTGVAWSPLDHSKFTTV-GWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp ---EEEECCCSSCEEEEEECSSSTTEEEEE-ETTSCEEEEECC-----
T ss_pred ---EeEECCCCCCEEEEEEeCCCCCEEEEE-cCCCeEEEEECCCCCcc
Confidence 333446899999999999 78899988 89999999998766544
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.7e-46 Score=358.80 Aligned_cols=306 Identities=20% Similarity=0.352 Sum_probs=259.1
Q ss_pred cCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccE
Q 010296 144 QKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHI 223 (513)
Q Consensus 144 ~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 223 (513)
+.+....+.+++.+|.+.|++++|+|++++|++|+.||+|+|||+.++.....+ ..|...|
T Consensus 51 ~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~-------------------~~h~~~v 111 (380)
T 3iz6_a 51 FNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAI-------------------KLHCPWV 111 (380)
T ss_dssp CCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEE-------------------ECCCTTC
T ss_pred cccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEE-------------------ecCCCCE
Confidence 455566777889999999999999999999999999999999999988876654 5788889
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCcc-------eeeeccCcCCCeEEEEEecCC-CeEEEEeCCCcEEEEeCCCCc
Q 010296 224 LALAVSSDGRYLASGGLDRHIHLWDTRIQE-------HIQAFPGHRGPVSCLTFRQGT-SELFSGSFDRTVKIWNAEDRA 295 (513)
Q Consensus 224 ~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 295 (513)
.+++|+|++++|++|+.|+.|++|++.+.. ....+.+|.+.|.++.|+|++ ..|++|+.|++|++||+.+++
T Consensus 112 ~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~ 191 (380)
T 3iz6_a 112 MECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ 191 (380)
T ss_dssp CCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC
T ss_pred EEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc
Confidence 999999999999999999999999987532 345678899999999999974 569999999999999999999
Q ss_pred eeEEe-----ecccCCeEEEEeeC-CC-eEEEEeCCCcEEEEecCCC-e-eeEEecCCCCeeEEEeecCCe-EEEEeCCC
Q 010296 296 YISTL-----FGHQSEVLTIDCLR-KE-RVLTVGRDRSMQLWKVPEE-S-RLVFRAPASSLECCCFISNDE-FLSGSDDG 365 (513)
Q Consensus 296 ~~~~~-----~~~~~~v~~~~~~~-~~-~~~~~~~d~~i~iwd~~~~-~-~~~~~~~~~~v~~~~~~~~~~-~~~~~~dg 365 (513)
.+..+ .+|...|.++.|++ ++ .+++++.|+.|++||++.. . ...+.+|...|.+++|+|++. |++|+.||
T Consensus 192 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~ 271 (380)
T 3iz6_a 192 RISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDG 271 (380)
T ss_dssp EEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSS
T ss_pred EEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCC
Confidence 88776 57889999999987 44 6779999999999999743 3 346778999999999999985 88999999
Q ss_pred CEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCc
Q 010296 366 SIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGS 445 (513)
Q Consensus 366 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~ 445 (513)
+|+|||+++++++..+....... ..+...|++++|+|+|++|++|+.||.
T Consensus 272 ~i~lwd~~~~~~~~~~~~~~~~~------------------------------~~~~~~v~~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 272 TCRLFDMRTGHQLQVYNREPDRN------------------------------DNELPIVTSVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp CEEEEETTTTEEEEEECCCCSSS------------------------------CCSSCSCSEEEECSSSSEEEEECTTSC
T ss_pred eEEEEECCCCcEEEEeccccccc------------------------------ccccCceEEEEECCCCCEEEEEECCCC
Confidence 99999999999888775432210 112234899999999999999999999
Q ss_pred EEEEEeCCCCcceeeeee--cCcccEEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 446 VRLWAIESETKDIQPLYN--LPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 446 v~vwd~~~~~~~~~~~~~--~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
|+|||+..+. .+..+.. ..|.+.|++++|+|+|++|++| +.|++|++|++...
T Consensus 322 i~vwd~~~~~-~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg-s~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 322 CYVWDTLLAE-MVLNLGTLQNSHEGRISCLGLSSDGSALCTG-SWDKNLKIWAFSGH 376 (380)
T ss_dssp EEEEETTTCC-EEEEECCSCSSCCCCCCEEEECSSSSEEEEE-CTTSCEEEEECCSS
T ss_pred EEEEECCCCc-eEEEEecccCCCCCceEEEEECCCCCEEEEe-eCCCCEEEEecCCC
Confidence 9999998773 3333321 2488899999999999999999 99999999998654
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.1e-46 Score=342.56 Aligned_cols=288 Identities=17% Similarity=0.257 Sum_probs=246.5
Q ss_pred chhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC
Q 010296 151 EFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS 230 (513)
Q Consensus 151 ~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 230 (513)
..+++.+|.+.|++++|+|++++|++|+.||+|+|||+.++..+..+ ..|..+|.+++|+|
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~-------------------~~~~~~v~~~~~~~ 65 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSI-------------------QVTETPVRAGKFIA 65 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE-------------------ECCSSCEEEEEEEG
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEe-------------------eccCCcEEEEEEeC
Confidence 34578899999999999999999999999999999999998876644 57888999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCC-ceeEEeecccCCeEE
Q 010296 231 DGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDR-AYISTLFGHQSEVLT 309 (513)
Q Consensus 231 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~ 309 (513)
++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|++|++||+.++ .....+.+|...|.+
T Consensus 66 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~ 145 (304)
T 2ynn_A 66 RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMC 145 (304)
T ss_dssp GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEE
T ss_pred CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999887 455678899999999
Q ss_pred EEeeC-CC-eEEEEeCCCcEEEEecCCCeee--EEecCCCCeeEEEeec--CC-eEEEEeCCCCEEEEecCCCCeeEEee
Q 010296 310 IDCLR-KE-RVLTVGRDRSMQLWKVPEESRL--VFRAPASSLECCCFIS--ND-EFLSGSDDGSIELWSLLRKKPVYIVK 382 (513)
Q Consensus 310 ~~~~~-~~-~~~~~~~d~~i~iwd~~~~~~~--~~~~~~~~v~~~~~~~--~~-~~~~~~~dg~i~iwd~~~~~~~~~~~ 382 (513)
++|+| ++ .+++++.|++|++||+...... ....+...+..+.++| ++ .+++++.|++|++||+.+++++..+.
T Consensus 146 v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~ 225 (304)
T 2ynn_A 146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE 225 (304)
T ss_dssp EEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC
Confidence 99998 44 6779999999999999776543 3345567888898886 44 48899999999999999999888875
Q ss_pred cCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeee
Q 010296 383 NAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLY 462 (513)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~ 462 (513)
. |...|.+++|+|++++|++|+.||+|+|||+.+. +....+.
T Consensus 226 ~-------------------------------------h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~-~~~~~~~ 267 (304)
T 2ynn_A 226 G-------------------------------------HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY-KVEKTLN 267 (304)
T ss_dssp C-------------------------------------CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC-CEEEEEC
T ss_pred C-------------------------------------CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC-ceeeecc
Confidence 3 3344999999999999999999999999999887 4444443
Q ss_pred ecCcccEEEEEEeecCCC--EEEEEecCCCcccccccCC
Q 010296 463 NLPLVGFVNSLAFAKSGQ--FLIAGVGQEPRLGRWGHLP 499 (513)
Q Consensus 463 ~~~~~~~v~~v~~sp~~~--~l~~~~~~dg~v~~W~~~~ 499 (513)
. +...+.+++|+|++. +|+++ +++ .+.+|++..
T Consensus 268 ~--~~~~~~~~~~~~~~~~~~~asg-~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 268 V--GLERSWCIATHPTGRKNYIASG-FDN-GFTVLSLGN 302 (304)
T ss_dssp C--SSSSEEEEEECTTCGGGCEEEE-ETT-EEEEEECC-
T ss_pred C--CCccEEEEEECCCCCceEEEEe-cCC-ceEEEEecc
Confidence 3 677899999999986 45555 555 466776643
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.9e-45 Score=340.65 Aligned_cols=294 Identities=23% Similarity=0.388 Sum_probs=249.3
Q ss_pred cchhhhhccCCCeEEEEECCCC-CeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE
Q 010296 150 DEFRVLLKHRQSVTAVALSEDD-SKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV 228 (513)
Q Consensus 150 ~~~~~~~~h~~~V~~~~~s~~~-~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 228 (513)
....++.+|.+.|++++|+|++ ++|++|+.|++|++|++......... +...+.+|...|.+++|
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~--------------~~~~~~~h~~~v~~~~~ 73 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGV--------------PVRSFKGHSHIVQDCTL 73 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEE--------------EEEEEECCSSCEEEEEE
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccc--------------cceEEeCCcccEEEEEE
Confidence 4456788999999999999965 89999999999999998653321100 11134689999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeE
Q 010296 229 SSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVL 308 (513)
Q Consensus 229 s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 308 (513)
+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||++ +.++..+.+|...|.
T Consensus 74 s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~ 152 (319)
T 3frx_A 74 TADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVS 152 (319)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEE
Confidence 9999999999999999999999999999999999999999999999999999999999999996 467778889999999
Q ss_pred EEEeeCCC-------eEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeE
Q 010296 309 TIDCLRKE-------RVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVY 379 (513)
Q Consensus 309 ~~~~~~~~-------~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~ 379 (513)
++.+.|.. .+++++.|+.|++||+.+.... .+..|...|.+++|+|++. |++++.||.|+|||+.+++++.
T Consensus 153 ~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~ 232 (319)
T 3frx_A 153 QVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY 232 (319)
T ss_dssp EEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE
T ss_pred EEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 99999843 5779999999999999987765 5678999999999999986 7899999999999999999888
Q ss_pred EeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCccee
Q 010296 380 IVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQ 459 (513)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~ 459 (513)
.+.... .|.+++|+|++.+|++++.+ .|++|++... ..+.
T Consensus 233 ~~~~~~--------------------------------------~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~-~~~~ 272 (319)
T 3frx_A 233 TLSAQD--------------------------------------EVFSLAFSPNRYWLAAATAT-GIKVFSLDPQ-YLVD 272 (319)
T ss_dssp EEECCS--------------------------------------CEEEEEECSSSSEEEEEETT-EEEEEEETTE-EEEE
T ss_pred EecCCC--------------------------------------cEEEEEEcCCCCEEEEEcCC-CcEEEEeCcC-eeee
Confidence 876422 29999999999999988865 5999999875 2222
Q ss_pred eeee------cCcccEEEEEEeecCCCEEEEEecCCCcccccccCC
Q 010296 460 PLYN------LPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLP 499 (513)
Q Consensus 460 ~~~~------~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~ 499 (513)
.+.. ..+...+.+++|+|+|++|+++ +.||.|++|++.+
T Consensus 273 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg-~~Dg~i~vWd~~t 317 (319)
T 3frx_A 273 DLRPEFAGYSKAAEPHAVSLAWSADGQTLFAG-YTDNVIRVWQVMT 317 (319)
T ss_dssp EECCCCTTCCGGGCCCEEEEEECTTSSEEEEE-ETTSCEEEEEEEE
T ss_pred ccCccccccccCcCcceeEEEECCCCCEEEEe-ecCceEEEEEEee
Confidence 2211 1245679999999999999999 8999999999765
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-45 Score=344.25 Aligned_cols=316 Identities=16% Similarity=0.228 Sum_probs=246.9
Q ss_pred cchhhhhccCC-CeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE
Q 010296 150 DEFRVLLKHRQ-SVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV 228 (513)
Q Consensus 150 ~~~~~~~~h~~-~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 228 (513)
..+..+.+|.. .|++++|+|++++||+|+.|++|+||++.++...... ....+|...|.+++|
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~----------------~~~~~h~~~v~~~~~ 69 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKS----------------VLSEGHQRTVRKVAW 69 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEE----------------EECSSCSSCEEEEEE
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeee----------------eeccccCCcEEEEEE
Confidence 45667889988 9999999999999999999999999999876533211 012579999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCc--ceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCc---eeEEeecc
Q 010296 229 SSDGRYLASGGLDRHIHLWDTRIQ--EHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRA---YISTLFGH 303 (513)
Q Consensus 229 s~~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~ 303 (513)
+|++++|++|+.|+.|++|++..+ +++..+.+|...|.+++|+|++++|++++.|++|++||+.++. ++..+.+|
T Consensus 70 sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h 149 (345)
T 3fm0_A 70 SPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSH 149 (345)
T ss_dssp CTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCC
T ss_pred CCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCc
Confidence 999999999999999999998776 4577889999999999999999999999999999999998763 45677889
Q ss_pred cCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCee---eEEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCee
Q 010296 304 QSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESR---LVFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPV 378 (513)
Q Consensus 304 ~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~---~~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~ 378 (513)
...|.+++|+|++ .+++++.|+.|++|++..... ..+..|...|.+++|+|++. |++++.|++|+||+.......
T Consensus 150 ~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~ 229 (345)
T 3fm0_A 150 TQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNE 229 (345)
T ss_dssp CSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCT
T ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCC
Confidence 9999999999987 566899999999999987653 35778899999999999985 889999999999996432211
Q ss_pred EEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcce
Q 010296 379 YIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDI 458 (513)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~ 458 (513)
..+.... .......+. .....|...|.+++|+|++.+|++++.|+.|++|++.......
T Consensus 230 ~~~~~~~--------~~~~~~~~~-------------~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~ 288 (345)
T 3fm0_A 230 QGVACSG--------SDPSWKCIC-------------TLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQ 288 (345)
T ss_dssp TCCCCC-----------CEEEEEE-------------EECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTT
T ss_pred ccceeec--------cCCccceeE-------------EecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcc
Confidence 0000000 000000000 0002255669999999999999999999999999997653211
Q ss_pred ee----e--eecCcccEEEEEEeecCCC-EEEEEecCCCcccccccCCCccc
Q 010296 459 QP----L--YNLPLVGFVNSLAFAKSGQ-FLIAGVGQEPRLGRWGHLPAARN 503 (513)
Q Consensus 459 ~~----~--~~~~~~~~v~~v~~sp~~~-~l~~~~~~dg~v~~W~~~~~~~~ 503 (513)
.. . ....|...|++|+|+|++. +||++ +.||+|++|+.....+.
T Consensus 289 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~-s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 289 QPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASC-SDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp SCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEE-ETTSCEEEEEECC----
T ss_pred eeeEEEEeeecccccCcEeEeEEeCCCceEEEEc-CCCCcEEEEEecCCCCc
Confidence 11 1 1124788999999999985 77777 99999999998876654
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.3e-45 Score=346.21 Aligned_cols=295 Identities=15% Similarity=0.144 Sum_probs=232.6
Q ss_pred hccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEE
Q 010296 156 LKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYL 235 (513)
Q Consensus 156 ~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 235 (513)
..|...|.+++|+|||++|++++ |+++++||.......... .. ...........|...|++++|+|++ .|
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~v~~~~~s~d~-~l 96 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPC-----AA---PNEGFCSAGVQTEAGVADLTWVGER-GI 96 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGG-----GT---TCGGGCSEEEEESSCEEEEEEETTT-EE
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeecccc-----cc---CCcceeeeeeccCCCEEEEEEeCCC-eE
Confidence 35778899999999999999887 778888873211100000 00 0000001123456789999999985 68
Q ss_pred EEEeCCCcEEEEeCCCcceeee----ccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEEE
Q 010296 236 ASGGLDRHIHLWDTRIQEHIQA----FPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTID 311 (513)
Q Consensus 236 ~s~~~dg~i~vwd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 311 (513)
++|+.||+|+|||+.+++.+.. +.+|...|++++|+|++++|++|+.|++|++||+.+++++..+.+|...|.+++
T Consensus 97 ~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~ 176 (344)
T 4gqb_B 97 LVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVA 176 (344)
T ss_dssp EEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEE
Confidence 8999999999999998876543 347999999999999999999999999999999999999999999999999999
Q ss_pred eeCCC--eEEEEeCCCcEEEEecCCCeeeEE---ecCCCCeeEEEeecCC--eEEEEeCCCCEEEEecCCCCeeEEeecC
Q 010296 312 CLRKE--RVLTVGRDRSMQLWKVPEESRLVF---RAPASSLECCCFISND--EFLSGSDDGSIELWSLLRKKPVYIVKNA 384 (513)
Q Consensus 312 ~~~~~--~~~~~~~d~~i~iwd~~~~~~~~~---~~~~~~v~~~~~~~~~--~~~~~~~dg~i~iwd~~~~~~~~~~~~~ 384 (513)
|++++ .+++++.|++|++||+++++.... ..+...+.+++|+|++ .|++|+.||.|+|||+++++++..+..
T Consensus 177 ~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~- 255 (344)
T 4gqb_B 177 ASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV- 255 (344)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC-
T ss_pred ecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC-
Confidence 99976 467999999999999998876533 3455678899999865 367899999999999999999888753
Q ss_pred CCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCC-CEEEEecCCCcEEEEEeCCCCcceeeeee
Q 010296 385 HPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGS-DLAASGAGNGSVRLWAIESETKDIQPLYN 463 (513)
Q Consensus 385 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~g~~dg~v~vwd~~~~~~~~~~~~~ 463 (513)
|...|++++|+|++ ++|++|+.||+|+|||+.++ + .+..
T Consensus 256 ------------------------------------h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~-~---~~~~ 295 (344)
T 4gqb_B 256 ------------------------------------HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS-E---LFRS 295 (344)
T ss_dssp ------------------------------------CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC-E---EEEE
T ss_pred ------------------------------------CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC-c---EEEE
Confidence 33449999999998 58999999999999999887 2 2333
Q ss_pred cCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCc
Q 010296 464 LPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 464 ~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
..|.+.|++|+|+|+++.|++++|.|++|++|++....
T Consensus 296 ~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 296 QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 45899999999999998666555999999999987653
No 11
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-43 Score=329.66 Aligned_cols=293 Identities=21% Similarity=0.329 Sum_probs=252.6
Q ss_pred cchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEc
Q 010296 150 DEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVS 229 (513)
Q Consensus 150 ~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 229 (513)
.....+.+|.+.|++++|+|++++|++|+.||.|++|++.++.....+ .+|...|.+++|+
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~-------------------~~h~~~v~~~~~~ 74 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-------------------SGHKLGISDVAWS 74 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-------------------CCCSSCEEEEEEC
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhh-------------------ccCCCceEEEEEc
Confidence 345677899999999999999999999999999999999988776544 5788999999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEE
Q 010296 230 SDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLT 309 (513)
Q Consensus 230 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 309 (513)
|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|..+|.+
T Consensus 75 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 154 (312)
T 4ery_A 75 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 154 (312)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred CCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCCC-eEEEEeCCCcEEEEecCCCeeeEE--ecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEeecCC
Q 010296 310 IDCLRKE-RVLTVGRDRSMQLWKVPEESRLVF--RAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVKNAH 385 (513)
Q Consensus 310 ~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~ 385 (513)
+.|+|++ .+++++.|+.|++||+.++..... ..+...+.+++|+|++. +++++.||.|++||+.+++++..+....
T Consensus 155 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 234 (312)
T 4ery_A 155 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 234 (312)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSC
T ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecC
Confidence 9999987 556899999999999998876533 34556789999999986 7799999999999999998888775432
Q ss_pred CcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecC
Q 010296 386 PLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLP 465 (513)
Q Consensus 386 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~ 465 (513)
... ..+......+++.+|++|+.||.|++||+.++ ..+..+..
T Consensus 235 ~~~----------------------------------~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~-- 277 (312)
T 4ery_A 235 NEK----------------------------------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK-EIVQKLQG-- 277 (312)
T ss_dssp CSS----------------------------------SCCCEEEECSSSCEEEECCTTSCEEEEETTTC-CEEEEECC--
T ss_pred Cce----------------------------------EEEEEEEEeCCCcEEEEECCCCEEEEEECCCc-hhhhhhhc--
Confidence 210 00223334467889999999999999999887 44444443
Q ss_pred cccEEEEEEeecCCCEEEEEe-cCCCcccccccC
Q 010296 466 LVGFVNSLAFAKSGQFLIAGV-GQEPRLGRWGHL 498 (513)
Q Consensus 466 ~~~~v~~v~~sp~~~~l~~~~-~~dg~v~~W~~~ 498 (513)
|...|.+++|+|++++|++++ +.|+.|++|+..
T Consensus 278 h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 278 HTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred cCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 788999999999999999884 379999999753
No 12
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6e-44 Score=362.42 Aligned_cols=354 Identities=13% Similarity=0.218 Sum_probs=266.4
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccc--cccC------------CChhhhc---
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGV--KYLW------------PSEEVLK--- 205 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~--~~~~------------~~~~~~~--- 205 (513)
+|+.........+.+|...|++++|+|+|++||+|+.|++|+|||+.++... ..+. +....+.
T Consensus 43 l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~ 122 (611)
T 1nr0_A 43 TVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVG 122 (611)
T ss_dssp EEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEE
T ss_pred EecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEE
Confidence 4556566677889999999999999999999999999999999999754322 1110 1111110
Q ss_pred ----------cCCCCCCCCCCCCCcccEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCC
Q 010296 206 ----------SHGAKDPQGRATKQSKHILALAVSSDGR-YLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGT 274 (513)
Q Consensus 206 ----------~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 274 (513)
..........+.+|...|++++|+|++. .|++|+.|++|++||..+++++..+.+|...|++++|+|++
T Consensus 123 ~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg 202 (611)
T 1nr0_A 123 EGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDG 202 (611)
T ss_dssp CCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTS
T ss_pred CCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCC
Confidence 1111223345678999999999999987 69999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCcEEEEeCCCCceeEEee-------cccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeee--------
Q 010296 275 SELFSGSFDRTVKIWNAEDRAYISTLF-------GHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRL-------- 338 (513)
Q Consensus 275 ~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~-------- 338 (513)
++|++++.|++|++||+.+++++..+. +|...|.+++|+|++ .+++++.|++|++||+.++...
T Consensus 203 ~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~ 282 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 282 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCC
Confidence 999999999999999999998888774 799999999999988 5669999999999999876432
Q ss_pred ------------------------------------EEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEe
Q 010296 339 ------------------------------------VFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIV 381 (513)
Q Consensus 339 ------------------------------------~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~ 381 (513)
.+.+|...|.+++|+|++. |++++.|++|++||+.++.....+
T Consensus 283 ~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~ 362 (611)
T 1nr0_A 283 IEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVF 362 (611)
T ss_dssp GGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECS
T ss_pred ccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeec
Confidence 2246778899999999986 789999999999999998776554
Q ss_pred ecCCCcccCCCCcccCc--------CccccccCCCCCCCC-------------------------------------CCc
Q 010296 382 KNAHPLLDGLKNFEQDE--------GKISNGHSENGNLNP-------------------------------------GSY 416 (513)
Q Consensus 382 ~~~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~~-------------------------------------~~~ 416 (513)
...|........+.... ..+..+....+.... ...
T Consensus 363 ~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~ 442 (611)
T 1nr0_A 363 PDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKL 442 (611)
T ss_dssp SCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEE
T ss_pred ccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCce
Confidence 33232211111111110 001111100000000 000
Q ss_pred CCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccc
Q 010296 417 HSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWG 496 (513)
Q Consensus 417 ~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~ 496 (513)
....+...+.+++|+|+|++|++|+.|++|+||++.... +..+....|...|++|+|+|+|++|+++ +.|++|++|+
T Consensus 443 ~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~--~~~~~~~~h~~~v~~v~fspdg~~las~-s~d~~v~~w~ 519 (611)
T 1nr0_A 443 TEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGAS--VSEVKTIVHPAEITSVAFSNNGAFLVAT-DQSRKVIPYS 519 (611)
T ss_dssp EEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTE--EEEEEEEECSSCEEEEEECTTSSEEEEE-ETTSCEEEEE
T ss_pred eeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCc--eeeeeccCCCCceEEEEECCCCCEEEEE-cCCCCEEEEE
Confidence 001134558899999999999999999999999998752 2222224488899999999999999999 8999999999
Q ss_pred cCC
Q 010296 497 HLP 499 (513)
Q Consensus 497 ~~~ 499 (513)
...
T Consensus 520 ~~~ 522 (611)
T 1nr0_A 520 VAN 522 (611)
T ss_dssp GGG
T ss_pred cCC
Confidence 865
No 13
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.7e-44 Score=336.08 Aligned_cols=298 Identities=20% Similarity=0.328 Sum_probs=241.6
Q ss_pred cchhhhhccCCCeEEEEE-----CC-CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccE
Q 010296 150 DEFRVLLKHRQSVTAVAL-----SE-DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHI 223 (513)
Q Consensus 150 ~~~~~~~~h~~~V~~~~~-----s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 223 (513)
.....+.+|.+.|++++| ++ ++++|++|+.|++|+||++......... ..+...+.+|...|
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~------------~~~~~~l~~h~~~V 79 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYF------------GIPHKALTGHNHFV 79 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBS------------EEEEEEECCCSSCE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCccccc------------ccccchhccCCCce
Confidence 345678899999999999 77 9999999999999999999765421100 00111346899999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEee--
Q 010296 224 LALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLF-- 301 (513)
Q Consensus 224 ~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-- 301 (513)
++++|+|++.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+... ....+.
T Consensus 80 ~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~ 158 (343)
T 2xzm_R 80 SDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEK 158 (343)
T ss_dssp EEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTT
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999743 333332
Q ss_pred -cccCCeEEEEeeCCC-----------eEEEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEEEeCCCCEE
Q 010296 302 -GHQSEVLTIDCLRKE-----------RVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLSGSDDGSIE 368 (513)
Q Consensus 302 -~~~~~v~~~~~~~~~-----------~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~ 368 (513)
.|...|.++.|+|++ .+++++.|+.|++||........+..|...|.+++|+|++. |++|+.||.|+
T Consensus 159 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 159 ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred cCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEE
Confidence 688899999999974 57799999999999966555557788999999999999986 78999999999
Q ss_pred EEecCC-CCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEE
Q 010296 369 LWSLLR-KKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVR 447 (513)
Q Consensus 369 iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~ 447 (513)
|||+.. ..+...+... ..|.+++|+|++.+|+++ .|+.|+
T Consensus 239 iwd~~~~~~~~~~~~~~--------------------------------------~~v~~v~~sp~~~~la~~-~d~~v~ 279 (343)
T 2xzm_R 239 IWDILNLTYPQREFDAG--------------------------------------STINQIAFNPKLQWVAVG-TDQGVK 279 (343)
T ss_dssp EEESSCCSSCSEEEECS--------------------------------------SCEEEEEECSSSCEEEEE-ESSCEE
T ss_pred EEECCCCcccceeecCC--------------------------------------CcEEEEEECCCCCEEEEE-CCCCEE
Confidence 999944 3343333221 229999999999888765 577899
Q ss_pred EEEeCCCCcce-eeeee---------cCcccEEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 448 LWAIESETKDI-QPLYN---------LPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 448 vwd~~~~~~~~-~~~~~---------~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
+|++.+..... ..+.. ..|...|++++|+|+|++|++| +.||.|++|++.++
T Consensus 280 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg-~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 280 IFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAG-FTDGVIRTFSFETS 341 (343)
T ss_dssp EEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEE-ETTSEEEEEEEEEE
T ss_pred EEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEe-cCCceEEEEEEEcc
Confidence 99998763211 11110 1366789999999999999999 89999999987654
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-44 Score=333.58 Aligned_cols=293 Identities=19% Similarity=0.250 Sum_probs=229.6
Q ss_pred cchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCcc--ccccCCChhhhccCCCCCCCCCCCCCcccEEEEE
Q 010296 150 DEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKG--VKYLWPSEEVLKSHGAKDPQGRATKQSKHILALA 227 (513)
Q Consensus 150 ~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 227 (513)
..++.+.+|.++|++++|+|+ +|++|+.|++|++|++..+.. ...+ ...+|...|++++
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~-----------------~~~~h~~~v~~v~ 65 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVL-----------------DETAHKKAIRSVA 65 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEE-----------------CTTCCCSCEEEEE
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEE-----------------ecCCccCCEEEEE
Confidence 456678899999999999998 999999999999999987532 2111 0124899999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCC-------cceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCC----Cce
Q 010296 228 VSSDGRYLASGGLDRHIHLWDTRI-------QEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAED----RAY 296 (513)
Q Consensus 228 ~s~~~~~l~s~~~dg~i~vwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~----~~~ 296 (513)
|+|++++|++|+.|++|+||++.. .+.+..+.+|...|.+++|+|++++|++|+.|++|++||+.. .++
T Consensus 66 ~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~ 145 (330)
T 2hes_X 66 WRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYEC 145 (330)
T ss_dssp ECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEE
T ss_pred ECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEE
Confidence 999999999999999999999853 356778889999999999999999999999999999999953 245
Q ss_pred eEEeecccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCe--e-eEEecCCCCeeEEEeecC--C-eEEEEeCCCCEEE
Q 010296 297 ISTLFGHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEES--R-LVFRAPASSLECCCFISN--D-EFLSGSDDGSIEL 369 (513)
Q Consensus 297 ~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~--~-~~~~~~~~~v~~~~~~~~--~-~~~~~~~dg~i~i 369 (513)
+..+.+|...|.+++|+|++ .|++++.|++|++|++.... . ..+..|...|.+++|+|+ + .+++++.|++|++
T Consensus 146 ~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~i 225 (330)
T 2hes_X 146 ISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRV 225 (330)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEE
T ss_pred EEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEE
Confidence 77788999999999999987 56689999999999987652 2 367789999999999998 4 4889999999999
Q ss_pred EecCCCC--------eeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec
Q 010296 370 WSLLRKK--------PVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA 441 (513)
Q Consensus 370 wd~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~ 441 (513)
|++..+. +...+. ..|...|.+++|++++ +|++++
T Consensus 226 w~~~~~~~~~~~~~~~~~~~~------------------------------------~~h~~~v~~v~~s~~~-~l~s~~ 268 (330)
T 2hes_X 226 WKYMGDDEDDQQEWVCEAILP------------------------------------DVHKRQVYNVAWGFNG-LIASVG 268 (330)
T ss_dssp EEEEEECTTSCEEEEEEEECC------------------------------------SCCSSCEEEEEECTTS-CEEEEE
T ss_pred EEecCCCccccceeEEeeecc------------------------------------cccccceEEEEEcCCC-EEEEEe
Confidence 9986542 111111 2245569999999765 899999
Q ss_pred CCCcEEEEEeCCCCcceeeeeecCccc-EEEEEEeec--CCCEEEEEecCCCcccccccCC
Q 010296 442 GNGSVRLWAIESETKDIQPLYNLPLVG-FVNSLAFAK--SGQFLIAGVGQEPRLGRWGHLP 499 (513)
Q Consensus 442 ~dg~v~vwd~~~~~~~~~~~~~~~~~~-~v~~v~~sp--~~~~l~~~~~~dg~v~~W~~~~ 499 (513)
.||.|+||++.++...........|.. .|++++|+| ++++|+++ +.||+|++|++..
T Consensus 269 ~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~-s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 269 ADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATG-GDDGIVNFWSLEK 328 (330)
T ss_dssp TTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEE-ETTSEEEEEEC--
T ss_pred CCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEe-cCCCcEEEEEecc
Confidence 999999999987621111111123655 899999999 68889988 9999999999764
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.9e-43 Score=358.69 Aligned_cols=310 Identities=15% Similarity=0.180 Sum_probs=252.1
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCccc
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKH 222 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (513)
+|+..+......+.+|.+.|++++|+|++++|++|+.|++|+|||+.++.....+.. ......+|...
T Consensus 174 lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~------------~~~~~~~h~~~ 241 (611)
T 1nr0_A 174 IFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFED------------DSLKNVAHSGS 241 (611)
T ss_dssp EEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBC------------TTSSSCSSSSC
T ss_pred EEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeecc------------ccccccccCCC
Confidence 556666677788999999999999999999999999999999999998877654310 00112379999
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceee-------------------------------------------ecc
Q 010296 223 ILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQ-------------------------------------------AFP 259 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~-------------------------------------------~~~ 259 (513)
|++++|+|++++|++++.|++|++||+.+++++. .+.
T Consensus 242 V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~ 321 (611)
T 1nr0_A 242 VFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRY 321 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEc
Confidence 9999999999999999999999999998776543 345
Q ss_pred CcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEe-ecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCee-
Q 010296 260 GHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTL-FGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESR- 337 (513)
Q Consensus 260 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~- 337 (513)
+|...|++++|+|++++|++++.|++|++||+.++.+...+ .+|...|.+++|++++.+++++.|+.+++|++.....
T Consensus 322 gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~ 401 (611)
T 1nr0_A 322 GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVD 401 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSC
T ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcccc
Confidence 79999999999999999999999999999999998877665 5789999999999999999999999999999754321
Q ss_pred ----------------------------------------eEEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCC
Q 010296 338 ----------------------------------------LVFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKK 376 (513)
Q Consensus 338 ----------------------------------------~~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~ 376 (513)
.....+...+.+++|+|++. +++|+.|++|++|++.++.
T Consensus 402 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~ 481 (611)
T 1nr0_A 402 SSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGAS 481 (611)
T ss_dssp TTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTE
T ss_pred ccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCc
Confidence 00112345678999999996 7799999999999998764
Q ss_pred eeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCc
Q 010296 377 PVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETK 456 (513)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~ 456 (513)
...... ..|...|++++|+|+|++|++++.|++|++|++.+...
T Consensus 482 ~~~~~~------------------------------------~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~ 525 (611)
T 1nr0_A 482 VSEVKT------------------------------------IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFE 525 (611)
T ss_dssp EEEEEE------------------------------------EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTE
T ss_pred eeeeec------------------------------------cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCc
Confidence 322111 12334499999999999999999999999999987323
Q ss_pred ceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCc
Q 010296 457 DIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 457 ~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
.........|...|++++|+|+|++|+++ +.|++|++|++..+.
T Consensus 526 ~~~~~~~~~H~~~V~~v~fspdg~~lasg-s~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 526 LAHTNSWTFHTAKVACVSWSPDNVRLATG-SLDNSVIVWNMNKPS 569 (611)
T ss_dssp ESCCCCCCCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTCTT
T ss_pred eeeeeeeeecccceeEEEECCCCCEEEEE-ECCCcEEEEECCCcc
Confidence 32221111288999999999999999999 999999999987654
No 16
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-42 Score=333.32 Aligned_cols=312 Identities=22% Similarity=0.288 Sum_probs=240.6
Q ss_pred ccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEE
Q 010296 157 KHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLA 236 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 236 (513)
+|.+.|+|++|+|+|++|++|+ +++++||++.++..+..+.......... ..........+...|++++|+|++++|+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDP-ENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC------------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCcccccccc-ccccccccCCCceeEEEEEECCCCCEEE
Confidence 6999999999999999999987 6899999999988776552211100000 0000001123344699999999999999
Q ss_pred EEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeC-C
Q 010296 237 SGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLR-K 315 (513)
Q Consensus 237 s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~ 315 (513)
+|+.|+.|+|||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||++++++...+. +...+.+++|+| +
T Consensus 140 s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGD 218 (393)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTT
T ss_pred EEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999998887776 667899999998 6
Q ss_pred C-eEEEEeCCCcEEEEecCCCeeeEE--------ecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEeecCC
Q 010296 316 E-RVLTVGRDRSMQLWKVPEESRLVF--------RAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVKNAH 385 (513)
Q Consensus 316 ~-~~~~~~~d~~i~iwd~~~~~~~~~--------~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~ 385 (513)
+ .+++++.|+.|++||+.++..... ..|...|.+++|+|++. |++++.|+.|++||+.+...........
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~ 298 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 298 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCC
Confidence 6 566899999999999988766532 46788999999999986 7899999999999998754322211000
Q ss_pred CcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecC
Q 010296 386 PLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLP 465 (513)
Q Consensus 386 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~ 465 (513)
.. . .......|...|.+++|+|++.+|++|+.||.|++||+.++ ..+..+..
T Consensus 299 ~~------------~-------------~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~-~~~~~l~~-- 350 (393)
T 1erj_A 299 SG------------T-------------CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG-NPLLMLQG-- 350 (393)
T ss_dssp --------------C-------------EEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC-CEEEEEEC--
T ss_pred CC------------c-------------ceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC-eEEEEECC--
Confidence 00 0 00000345566999999999999999999999999999987 44444443
Q ss_pred cccEEEEEEeec------CCCEEEEEecCCCcccccccCCC
Q 010296 466 LVGFVNSLAFAK------SGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 466 ~~~~v~~v~~sp------~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
|.+.|.+++|+| ++.+|+++ +.||+|++|+....
T Consensus 351 h~~~v~~v~~~~~~~~~p~~~~l~sg-s~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 351 HRNSVISVAVANGSSLGPEYNVFATG-SGDCKARIWKYKKI 390 (393)
T ss_dssp CSSCEEEEEECSSCTTCTTCEEEEEE-ETTSEEEEEEEEEC
T ss_pred CCCCEEEEEecCCcCcCCCCCEEEEE-CCCCcEEECccccc
Confidence 888999999886 67888888 99999999987544
No 17
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.5e-42 Score=323.01 Aligned_cols=300 Identities=22% Similarity=0.350 Sum_probs=249.2
Q ss_pred cccchhhhhccCCCeEEEEECCC-CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEE
Q 010296 148 ATDEFRVLLKHRQSVTAVALSED-DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILAL 226 (513)
Q Consensus 148 ~~~~~~~~~~h~~~V~~~~~s~~-~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 226 (513)
......+|++|++.|++|+|+|+ +++|+||+.|++|+|||+......... +...+.+|...|.++
T Consensus 27 ~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~--------------~~~~l~~h~~~V~~~ 92 (340)
T 4aow_A 27 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGI--------------PQRALRGHSHFVSDV 92 (340)
T ss_dssp EEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEE--------------EEEEECCCSSCEEEE
T ss_pred ceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccce--------------eeEEEeCCCCCEEEE
Confidence 33445678999999999999997 689999999999999999876543211 111346899999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCce-eEEeecccC
Q 010296 227 AVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAY-ISTLFGHQS 305 (513)
Q Consensus 227 ~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~ 305 (513)
+|+|++++|++++.|+.|++|+............+...+..+.+++++.+|++++.|+.+++||+..... ...+.+|..
T Consensus 93 ~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~ 172 (340)
T 4aow_A 93 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSE 172 (340)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSS
T ss_pred EECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccC
Confidence 9999999999999999999999999998888888999999999999999999999999999999977554 344567889
Q ss_pred CeEEEEeeCCC---eEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEE
Q 010296 306 EVLTIDCLRKE---RVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYI 380 (513)
Q Consensus 306 ~v~~~~~~~~~---~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~ 380 (513)
.+..++|++++ .+++++.|+.|++|++.+.... .+..|...|.+++|+|++. |++|+.||.|++||+.+.+++..
T Consensus 173 ~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 252 (340)
T 4aow_A 173 WVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT 252 (340)
T ss_dssp CEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE
T ss_pred cccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeee
Confidence 99999998753 4568999999999999988776 5677889999999999986 77999999999999999998887
Q ss_pred eecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceee
Q 010296 381 VKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQP 460 (513)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~ 460 (513)
+.... .|.+++|+|++.++ +++.|+.|+|||+... ..+..
T Consensus 253 ~~~~~--------------------------------------~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~-~~~~~ 292 (340)
T 4aow_A 253 LDGGD--------------------------------------IINALCFSPNRYWL-CAATGPSIKIWDLEGK-IIVDE 292 (340)
T ss_dssp EECSS--------------------------------------CEEEEEECSSSSEE-EEEETTEEEEEETTTT-EEEEE
T ss_pred ecCCc--------------------------------------eEEeeecCCCCcee-eccCCCEEEEEECCCC-eEEEe
Confidence 76432 29999999987654 5667999999999876 22222
Q ss_pred ee-------ecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 461 LY-------NLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 461 ~~-------~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
+. ...|...|++++|+|+|++|+++ +.||.|+||++.++.|
T Consensus 293 ~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg-s~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 293 LKQEVISTSSKAEPPQCTSLAWSADGQTLFAG-YTDNLVRVWQVTIGTR 340 (340)
T ss_dssp ECCC-------CCCCCEEEEEECTTSSEEEEE-ETTSCEEEEEEEC---
T ss_pred ccccceeeeccCCCCCEEEEEECCCCCEEEEE-eCCCEEEEEeCCCcCC
Confidence 21 12367889999999999999998 8999999999988753
No 18
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=7.4e-41 Score=314.72 Aligned_cols=287 Identities=16% Similarity=0.264 Sum_probs=248.1
Q ss_pred hhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCC
Q 010296 154 VLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGR 233 (513)
Q Consensus 154 ~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 233 (513)
...+|...|++++|+|++++|++++ ||.|++|++.++.....+. ......|...|.+++|+|+++
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~--------------~~~~~~~~~~v~~~~~~~~~~ 110 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVS--------------QLDCLNRDNYIRSCKLLPDGC 110 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSE--------------EEECSCTTSBEEEEEECTTSS
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeee--------------cccccCCCCcEEEEEEcCCCC
Confidence 3447999999999999999999999 9999999998776433220 001226888999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCcc--eeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEEE
Q 010296 234 YLASGGLDRHIHLWDTRIQE--HIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTID 311 (513)
Q Consensus 234 ~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 311 (513)
+|++++.+|.|++|++.+++ ....+..|...|.+++|+|++++|++++.||.|++||+.+++.+..+..|...+.+++
T Consensus 111 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~ 190 (337)
T 1gxr_A 111 TLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID 190 (337)
T ss_dssp EEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEE
Confidence 99999999999999999887 6677888999999999999999999999999999999999999999999999999999
Q ss_pred eeCCC-eEEEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEeecCCCccc
Q 010296 312 CLRKE-RVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLD 389 (513)
Q Consensus 312 ~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 389 (513)
|+|++ .+++++.++.|++||+.+........+...+.+++|+|++. +++++.++.|++|++.+++....
T Consensus 191 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~--------- 261 (337)
T 1gxr_A 191 ISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL--------- 261 (337)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE---------
T ss_pred ECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEE---------
Confidence 99987 56688899999999999998887777888999999999986 77899999999999998765432
Q ss_pred CCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccE
Q 010296 390 GLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGF 469 (513)
Q Consensus 390 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 469 (513)
..|...|.+++|+|++++|++++.||.|++|++.++.. + ....+...
T Consensus 262 -----------------------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~-~---~~~~~~~~ 308 (337)
T 1gxr_A 262 -----------------------------HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS-I---FQSKESSS 308 (337)
T ss_dssp -----------------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-E---EEEECSSC
T ss_pred -----------------------------cCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeE-E---EEecCCCc
Confidence 22334499999999999999999999999999998732 2 23347888
Q ss_pred EEEEEeecCCCEEEEEecCCCcccccccC
Q 010296 470 VNSLAFAKSGQFLIAGVGQEPRLGRWGHL 498 (513)
Q Consensus 470 v~~v~~sp~~~~l~~~~~~dg~v~~W~~~ 498 (513)
|.+++|+|++++|+++ +.||.|++|++.
T Consensus 309 v~~~~~s~~~~~l~~~-~~dg~i~iw~~~ 336 (337)
T 1gxr_A 309 VLSCDISVDDKYIVTG-SGDKKATVYEVI 336 (337)
T ss_dssp EEEEEECTTSCEEEEE-ETTSCEEEEEEE
T ss_pred EEEEEECCCCCEEEEe-cCCCeEEEEEEe
Confidence 9999999999999999 899999999863
No 19
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.9e-41 Score=343.10 Aligned_cols=283 Identities=25% Similarity=0.403 Sum_probs=248.6
Q ss_pred ccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE
Q 010296 149 TDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV 228 (513)
Q Consensus 149 ~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 228 (513)
...+..+.+|...|++++|+|++++|++++.|++|++|++....... +.+|...|.+++|
T Consensus 293 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~--------------------~~~~~~~v~~~~~ 352 (577)
T 2ymu_A 293 GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQT--------------------LTGHSSSVWGVAF 352 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEE--------------------ECCCSSCEEEEEE
T ss_pred CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEE--------------------EeCCCCCEEEEEE
Confidence 35566788999999999999999999999999999999987544322 3578889999999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeE
Q 010296 229 SSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVL 308 (513)
Q Consensus 229 s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 308 (513)
+|++++|++|+.++.|++|+. +++.+..+.+|...|.+++|+|++++|++++.|+.|++|+. +++.+..+.+|...|.
T Consensus 353 s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~ 430 (577)
T 2ymu_A 353 SPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVW 430 (577)
T ss_dssp CTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEE
T ss_pred CCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeE
Confidence 999999999999999999995 57788889999999999999999999999999999999996 5678888999999999
Q ss_pred EEEeeCCC-eEEEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEeecCCC
Q 010296 309 TIDCLRKE-RVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVKNAHP 386 (513)
Q Consensus 309 ~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 386 (513)
+++|+|++ .+++++.|+.|++|++.......+..|...+.+++|+|++. |++++.|+.|++|+. +++++..+..
T Consensus 431 ~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~--- 506 (577)
T 2ymu_A 431 GVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG--- 506 (577)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEEC---
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeC---
Confidence 99999987 55588999999999987766668889999999999999986 779999999999995 6777777643
Q ss_pred cccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCc
Q 010296 387 LLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPL 466 (513)
Q Consensus 387 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~ 466 (513)
|...|++++|+|++++|++++.||.|+|||+. + ..+..+.. |
T Consensus 507 ----------------------------------h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~-~~~~~~~~--h 548 (577)
T 2ymu_A 507 ----------------------------------HSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G-QLLQTLTG--H 548 (577)
T ss_dssp ----------------------------------CSSCEEEEEECTTSSCEEEEETTSEEEEECTT-S-CEEEEEEC--C
T ss_pred ----------------------------------CCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC-C-CEEEEEcC--C
Confidence 33449999999999999999999999999964 3 34555543 8
Q ss_pred ccEEEEEEeecCCCEEEEEecCCCcccccc
Q 010296 467 VGFVNSLAFAKSGQFLIAGVGQEPRLGRWG 496 (513)
Q Consensus 467 ~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~ 496 (513)
.+.|++++|+|||++|+++ +.|++|++||
T Consensus 549 ~~~v~~~~fs~dg~~l~s~-~~D~~i~~Wd 577 (577)
T 2ymu_A 549 SSSVWGVAFSPDGQTIASA-SSDKTVKLWN 577 (577)
T ss_dssp SSCEEEEEECTTSSCEEEE-ETTSCEEEEC
T ss_pred CCCEEEEEEcCCCCEEEEE-eCCCEEEEeC
Confidence 8999999999999999998 8999999997
No 20
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.8e-41 Score=324.98 Aligned_cols=307 Identities=14% Similarity=0.140 Sum_probs=248.1
Q ss_pred ccchhhhhccCCCeEEEEECCCC-CeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEE
Q 010296 149 TDEFRVLLKHRQSVTAVALSEDD-SKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALA 227 (513)
Q Consensus 149 ~~~~~~~~~h~~~V~~~~~s~~~-~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 227 (513)
....+.+.+|.+.|++++|+|++ ++|++|+.||.|+||++.++.....+ ...+|...|.+++
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----------------~~~~h~~~v~~~~ 125 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFI-----------------QGMGPGDAITGMK 125 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEE-----------------CCCSTTCBEEEEE
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceee-----------------ecCCcCCceeEEE
Confidence 34455778999999999999999 99999999999999999988766544 2347899999999
Q ss_pred EcC-CCCEEEEEeCCCcEEEEeCCCcceeeeccC---cCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecc
Q 010296 228 VSS-DGRYLASGGLDRHIHLWDTRIQEHIQAFPG---HRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGH 303 (513)
Q Consensus 228 ~s~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 303 (513)
|+| ++.+|++++.|+.|++||+.+ ..+..+.. |...|.+++|+|++++|++++.|+.|++||+ +++.+..+..|
T Consensus 126 ~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h 203 (383)
T 3ei3_B 126 FNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLH 203 (383)
T ss_dssp EETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECS
T ss_pred eCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccC
Confidence 999 789999999999999999986 44445443 4588999999999999999999999999999 57788889999
Q ss_pred cCCeEEEEeeCCCe--EEEEeCCCcEEEEecCC----CeeeEEecCCCCeeEEEeec-CCe-EEEEeCCCCEEEEecCCC
Q 010296 304 QSEVLTIDCLRKER--VLTVGRDRSMQLWKVPE----ESRLVFRAPASSLECCCFIS-NDE-FLSGSDDGSIELWSLLRK 375 (513)
Q Consensus 304 ~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~----~~~~~~~~~~~~v~~~~~~~-~~~-~~~~~~dg~i~iwd~~~~ 375 (513)
...|.+++|+|++. +++++.|+.|++||+++ ........|...+.+++|+| ++. |++++.|+.|++||+.++
T Consensus 204 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 204 KAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 99999999999874 67999999999999987 55665567899999999999 875 789999999999999998
Q ss_pred CeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCC
Q 010296 376 KPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESET 455 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~ 455 (513)
+.+..+......... ....+.. . -.....+..++|+|++++ +|+.||.|+|||+.++
T Consensus 284 ~~~~~~~~~~~~~~~------~~~~~~~-----------~---~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~- 340 (383)
T 3ei3_B 284 SKPDQIIIHPHRQFQ------HLTPIKA-----------T---WHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSG- 340 (383)
T ss_dssp TSCSEEEECCBCCCT------TSCCCCC-----------E---ECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTC-
T ss_pred ccccccccccccccc------cccceEE-----------e---ccCCCCceEEEecCCccc--ccCCCCeEEEEecCCC-
Confidence 877666543211000 0000000 0 011123677889999988 8999999999999987
Q ss_pred cceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCC
Q 010296 456 KDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLP 499 (513)
Q Consensus 456 ~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~ 499 (513)
..+..+....+.+.+.+++|+|++++|+++ + ||.|++|++..
T Consensus 341 ~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~-s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 341 GLVHQLRDPNAAGIISLNKFSPTGDVLASG-M-GFNILIWNRED 382 (383)
T ss_dssp CEEEEECBTTBCSCCCEEEECTTSSEEEEE-E-TTEEEEEECC-
T ss_pred ceeeeecCCCCCceEEEEEEecCccEEEEe-c-CCcEEEEecCC
Confidence 445555544467788888999999999999 6 89999999754
No 21
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3e-41 Score=325.59 Aligned_cols=254 Identities=21% Similarity=0.355 Sum_probs=231.6
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCccc
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKH 222 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (513)
+|+.......+.+.+|.+.|++++|+|++++|++|+.|++|+|||+.++..+..+ .+|...
T Consensus 134 vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~-------------------~~h~~~ 194 (410)
T 1vyh_C 134 VWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-------------------HGHDHN 194 (410)
T ss_dssp EEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECC-------------------CCCSSC
T ss_pred EEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE-------------------cCCCCC
Confidence 5777777788899999999999999999999999999999999999988776643 688999
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeec
Q 010296 223 ILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFG 302 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 302 (513)
|.+++|+|++.+|++|+.|++|++||+.++.++..+.+|...|.++.|+|++.+|++|+.|++|++||+.++.+...+.+
T Consensus 195 V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~ 274 (410)
T 1vyh_C 195 VSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274 (410)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeEEEEeeCC--------------------C-eEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe-EE
Q 010296 303 HQSEVLTIDCLRK--------------------E-RVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE-FL 359 (513)
Q Consensus 303 ~~~~v~~~~~~~~--------------------~-~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~-~~ 359 (513)
|...|.+++|+|+ + .+++++.|+.|++||+.++..+ .+.+|...|.+++|+|++. |+
T Consensus 275 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~ 354 (410)
T 1vyh_C 275 HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354 (410)
T ss_dssp CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEE
T ss_pred CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEE
Confidence 9999999999985 2 5779999999999999988766 6678899999999999986 88
Q ss_pred EEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEE
Q 010296 360 SGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAAS 439 (513)
Q Consensus 360 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 439 (513)
+|+.||.|++||+.+++++..+.. |...|++++|+|++.+|++
T Consensus 355 s~s~D~~i~vwd~~~~~~~~~~~~-------------------------------------h~~~v~~l~~~~~~~~l~s 397 (410)
T 1vyh_C 355 SCADDKTLRVWDYKNKRCMKTLNA-------------------------------------HEHFVTSLDFHKTAPYVVT 397 (410)
T ss_dssp EEETTTEEEEECCTTSCCCEEEEC-------------------------------------CSSCEEEEEECSSSSCEEE
T ss_pred EEeCCCeEEEEECCCCceEEEEcC-------------------------------------CCCcEEEEEEcCCCCEEEE
Confidence 999999999999999988887743 3344999999999999999
Q ss_pred ecCCCcEEEEEeC
Q 010296 440 GAGNGSVRLWAIE 452 (513)
Q Consensus 440 g~~dg~v~vwd~~ 452 (513)
|+.||+|+||+++
T Consensus 398 gs~D~~i~vW~~r 410 (410)
T 1vyh_C 398 GSVDQTVKVWECR 410 (410)
T ss_dssp EETTSEEEEEC--
T ss_pred EeCCCcEEEEeCC
Confidence 9999999999863
No 22
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.5e-41 Score=345.33 Aligned_cols=291 Identities=23% Similarity=0.394 Sum_probs=240.7
Q ss_pred hhhhccCCCeEEEEECCCC-CeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC
Q 010296 153 RVLLKHRQSVTAVALSEDD-SKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD 231 (513)
Q Consensus 153 ~~~~~h~~~V~~~~~s~~~-~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 231 (513)
..+.+|++.|++|+|+|++ .+|+||+.|++|+||++......... ....+.+|...|.+++|+|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~--------------~~~~~~~h~~~v~~v~~s~~ 441 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGV--------------AQRRLTGHSHFVEDVVLSSD 441 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCE--------------EEEEEECCSSCEEEEEECTT
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccccc--------------ccceecCCCCcEEEEEECCC
Confidence 4578999999999999874 78999999999999999865422100 01134689999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEe---ecccCCeE
Q 010296 232 GRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTL---FGHQSEVL 308 (513)
Q Consensus 232 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~ 308 (513)
+++|++|+.||+|+|||+.++..+..+.+|...|.+++|+|++++|++++.|++|++||+......... .+|...|.
T Consensus 442 g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~ 521 (694)
T 3dm0_A 442 GQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVS 521 (694)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEE
T ss_pred CCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEE
Confidence 999999999999999999999999999999999999999999999999999999999998665433322 46888999
Q ss_pred EEEeeCCC---eEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEeec
Q 010296 309 TIDCLRKE---RVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVKN 383 (513)
Q Consensus 309 ~~~~~~~~---~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~ 383 (513)
+++|+|++ .+++++.|++|++||+.+.... .+..|...|.+++|+|++. |++++.||.|+|||+.+++.+..+..
T Consensus 522 ~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~ 601 (694)
T 3dm0_A 522 CVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA 601 (694)
T ss_dssp EEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC
T ss_pred EEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC
Confidence 99999975 5789999999999999987765 5678899999999999986 77999999999999999987765532
Q ss_pred CCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeee
Q 010296 384 AHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYN 463 (513)
Q Consensus 384 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~ 463 (513)
. ..|.+++|+|++.+|++++ ++.|+|||+.++ ..+..+..
T Consensus 602 ~--------------------------------------~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~-~~~~~~~~ 641 (694)
T 3dm0_A 602 N--------------------------------------SVIHALCFSPNRYWLCAAT-EHGIKIWDLESK-SIVEDLKV 641 (694)
T ss_dssp S--------------------------------------SCEEEEEECSSSSEEEEEE-TTEEEEEETTTT-EEEEEECC
T ss_pred C--------------------------------------CcEEEEEEcCCCcEEEEEc-CCCEEEEECCCC-CChhhhcc
Confidence 1 2299999999998888776 456999999887 33322211
Q ss_pred c-----------------CcccEEEEEEeecCCCEEEEEecCCCcccccccC
Q 010296 464 L-----------------PLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHL 498 (513)
Q Consensus 464 ~-----------------~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~ 498 (513)
. .+...+++++|+|+|++|+++ +.||.|++|++.
T Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sg-s~Dg~i~iW~i~ 692 (694)
T 3dm0_A 642 DLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSG-YTDGVIRVWGIG 692 (694)
T ss_dssp CCC----------------CCCCEEEEEECTTSSEEEEE-ETTSEEEEEEC-
T ss_pred ccccccccccccccccCCceeEEeeeEEEcCCCCEEEEE-cCCCeEEEEecc
Confidence 0 011237899999999999999 999999999874
No 23
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-40 Score=314.53 Aligned_cols=289 Identities=17% Similarity=0.232 Sum_probs=252.1
Q ss_pred cchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEc
Q 010296 150 DEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVS 229 (513)
Q Consensus 150 ~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 229 (513)
.....+.+|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+ .+|...|++++|+
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-------------------~~h~~~v~~~~~~ 83 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTL-------------------DGHTGTIWSIDVD 83 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEE-------------------CCCSSCEEEEEEC
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhh-------------------hhcCCcEEEEEEc
Confidence 344568899999999999999999999999999999999998877654 5789999999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCC-----CcEEEEeCCCCc---------
Q 010296 230 SDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFD-----RTVKIWNAEDRA--------- 295 (513)
Q Consensus 230 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~--------- 295 (513)
|++++|++++.||.|++||+.+++.+..+. +...|.+++|+|++++|++++.+ +.|++|++....
T Consensus 84 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~ 162 (369)
T 3zwl_B 84 CFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVS 162 (369)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEEC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccc
Confidence 999999999999999999999999998888 88999999999999999999998 999999997653
Q ss_pred --eeEEeecccC--CeEEEEeeCCC-eEEEEeCCCcEEEEecCC-Ceee-EEecCCCCeeEEEeecCCe-EEEEeCCCCE
Q 010296 296 --YISTLFGHQS--EVLTIDCLRKE-RVLTVGRDRSMQLWKVPE-ESRL-VFRAPASSLECCCFISNDE-FLSGSDDGSI 367 (513)
Q Consensus 296 --~~~~~~~~~~--~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~-~~~~-~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i 367 (513)
.+..+..|.. .+.+++|+|++ .+++++.++.|++||+.+ .... .+..+...+.+++|+|++. |++++.||.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 242 (369)
T 3zwl_B 163 EEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNS 242 (369)
T ss_dssp SSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred cceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceE
Confidence 3344455655 89999999987 556888999999999998 4444 6677889999999999986 7899999999
Q ss_pred EEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCC---
Q 010296 368 ELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNG--- 444 (513)
Q Consensus 368 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg--- 444 (513)
++||+.+++.+..+.... .+.+++|+|+++++++++.++
T Consensus 243 ~v~d~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~ 284 (369)
T 3zwl_B 243 FLVDVSTLQVLKKYETDC--------------------------------------PLNTAVITPLKEFIILGGGQEAKD 284 (369)
T ss_dssp EEEETTTCCEEEEEECSS--------------------------------------CEEEEEECSSSSEEEEEECCC---
T ss_pred EEEECCCCceeeeecCCC--------------------------------------CceeEEecCCCceEEEeecCCCce
Confidence 999999999888876322 299999999999999999988
Q ss_pred -----------cEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 445 -----------SVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 445 -----------~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
.|++|++.++ ..+..+.. |...|++++|+|++++|+++ +.||.|++|++..+
T Consensus 285 ~~~~~~~~~~~~i~~~d~~~~-~~~~~~~~--~~~~v~~~~~s~~~~~l~s~-~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 285 VTTTSANEGKFEARFYHKIFE-EEIGRVQG--HFGPLNTVAISPQGTSYASG-GEDGFIRLHHFEKS 347 (369)
T ss_dssp ----------CEEEEEETTTC-CEEEEEEC--CSSCEEEEEECTTSSEEEEE-ETTSEEEEEEECHH
T ss_pred EEEEecCCCcceeEEEecCCC-cchhheec--ccCcEEEEEECCCCCEEEEE-cCCCeEEEEECccc
Confidence 8999999887 44444433 78899999999999999999 89999999998654
No 24
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.5e-41 Score=323.94 Aligned_cols=309 Identities=15% Similarity=0.172 Sum_probs=248.1
Q ss_pred chhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC
Q 010296 151 EFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS 230 (513)
Q Consensus 151 ~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 230 (513)
..+.+.+|.+.|++|+|+| ++|++|+.||+|+||++.++.....+ .....+.+|...|++++|+|
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~-------------~~~~~~~~h~~~v~~~~~~~ 72 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPK-------------DKSYSHFVHKSGLHHVDVLQ 72 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGG-------------GGEEEEECCTTCEEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCC-------------CcceEEecCCCcEEEEEEec
Confidence 3456789999999999999 89999999999999999987721100 00012357899999999999
Q ss_pred C----C---CEEEEEeCCCcEEEEeCCCcce-----eeeccCc-----CCCeEEEEEe----cCCCe-EEEEeCCCcEEE
Q 010296 231 D----G---RYLASGGLDRHIHLWDTRIQEH-----IQAFPGH-----RGPVSCLTFR----QGTSE-LFSGSFDRTVKI 288 (513)
Q Consensus 231 ~----~---~~l~s~~~dg~i~vwd~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~dg~i~i 288 (513)
+ + .+|++++.||.|++|++.+++. +..+..| ...|.+++|+ |++++ |++++.||.|++
T Consensus 73 ~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~i 152 (397)
T 1sq9_A 73 AIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYI 152 (397)
T ss_dssp EEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEE
T ss_pred ccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEE
Confidence 9 9 9999999999999999998887 8888888 5999999999 99999 999999999999
Q ss_pred EeCCC------CceeE-----Ee-------ecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeee-EEec---C---
Q 010296 289 WNAED------RAYIS-----TL-------FGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRL-VFRA---P--- 343 (513)
Q Consensus 289 wd~~~------~~~~~-----~~-------~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~-~~~~---~--- 343 (513)
||+.+ ++.+. .+ ..|...|.+++|+|++.+++++.++.|++||+++...+ .+.. |
T Consensus 153 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~ 232 (397)
T 1sq9_A 153 WKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINN 232 (397)
T ss_dssp EEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CC
T ss_pred EeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEecccccccc
Confidence 99998 66665 66 34888999999999885558889999999999988766 4555 6
Q ss_pred CCCeeEEEeecCCe-EEEEeCC---CCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCC
Q 010296 344 ASSLECCCFISNDE-FLSGSDD---GSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSS 419 (513)
Q Consensus 344 ~~~v~~~~~~~~~~-~~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 419 (513)
...+.+++|+|++. |++++.| |.|++||+.+++++..+........ ......
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~------------------------~~~~~~ 288 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQ------------------------ASLGEF 288 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------------------------------CCB
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccccc------------------------cccccc
Confidence 88999999999885 7789999 9999999999998888754210000 000002
Q ss_pred CCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeec----Cc---------------ccEEEEEEeecCC-
Q 010296 420 SAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNL----PL---------------VGFVNSLAFAKSG- 479 (513)
Q Consensus 420 ~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~----~~---------------~~~v~~v~~sp~~- 479 (513)
.|...|.+++|+|++++|++++.||.|+|||+.++ ..+..+... .| ...|++++|+|++
T Consensus 289 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~ 367 (397)
T 1sq9_A 289 AHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK-ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGW 367 (397)
T ss_dssp SBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTT
T ss_pred ccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC-ceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccc
Confidence 25566999999999999999999999999999887 444444410 24 7899999999998
Q ss_pred ---------CEEEEEecCCCcccccccCCC
Q 010296 480 ---------QFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 480 ---------~~l~~~~~~dg~v~~W~~~~~ 500 (513)
++|+++ +.||.|++|++..+
T Consensus 368 ~~~~~~~~~~~l~s~-~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 368 RSGMGADLNESLCCV-CLDRSIRWFREAGG 396 (397)
T ss_dssp SBSTTCTTSCEEEEE-ETTTEEEEEEEEC-
T ss_pred cccccccccceEEEe-cCCCcEEEEEcCCC
Confidence 788888 89999999998654
No 25
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.5e-41 Score=318.96 Aligned_cols=298 Identities=16% Similarity=0.203 Sum_probs=241.9
Q ss_pred hhhhccCCCeEEEEECCCCCeEE-EEeC---CceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE
Q 010296 153 RVLLKHRQSVTAVALSEDDSKGF-SASK---DGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV 228 (513)
Q Consensus 153 ~~~~~h~~~V~~~~~s~~~~~l~-t~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 228 (513)
+.+.+|...|++++|+|++..|+ +|+. ||.|+||++.++...... ..+|...|++++|
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~------------------~~~~~~~v~~~~~ 73 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLR------------------EIEKAKPIKCGTF 73 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEE------------------EEEESSCEEEEEC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCccccee------------------eecccCcEEEEEE
Confidence 34568999999999999996555 5665 999999999988764432 2368889999999
Q ss_pred cCC---CCEEEEEeCCCcEEEEeCCCcc-eeeeccCcCCCeEEEEE------ecCCCeEEEEeCCCcEEEEeCCCCc-ee
Q 010296 229 SSD---GRYLASGGLDRHIHLWDTRIQE-HIQAFPGHRGPVSCLTF------RQGTSELFSGSFDRTVKIWNAEDRA-YI 297 (513)
Q Consensus 229 s~~---~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~dg~i~iwd~~~~~-~~ 297 (513)
+|+ +.+|++|+.||.|++|++.+++ .+..+.+|...|.++.| +|++++|++++.||.|++||+.++. .+
T Consensus 74 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~ 153 (357)
T 3i2n_A 74 GATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPV 153 (357)
T ss_dssp TTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCS
T ss_pred cCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcc
Confidence 998 6999999999999999999988 88899999999999965 6789999999999999999999887 67
Q ss_pred EEeecccC----CeEEEE----eeCCC-eEEEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeec---CC-eEEEEeCC
Q 010296 298 STLFGHQS----EVLTID----CLRKE-RVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFIS---ND-EFLSGSDD 364 (513)
Q Consensus 298 ~~~~~~~~----~v~~~~----~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~---~~-~~~~~~~d 364 (513)
..+..+.+ .+.++. |++++ .+++++.++.|++||+++........+...+.+++|+| ++ .+++++.|
T Consensus 154 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 233 (357)
T 3i2n_A 154 ANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLE 233 (357)
T ss_dssp EEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEEST
T ss_pred eeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCC
Confidence 77765554 788888 66776 45588899999999999999888888899999999998 55 48899999
Q ss_pred CCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCC-EEEEecCC
Q 010296 365 GSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSD-LAASGAGN 443 (513)
Q Consensus 365 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~g~~d 443 (513)
|.|++||+.+++++..+..... ..|...|++++|+|+++ +|++|+.|
T Consensus 234 g~i~i~d~~~~~~~~~~~~~~~--------------------------------~~~~~~v~~~~~~~~~~~~l~~~~~d 281 (357)
T 3i2n_A 234 GKFHVFDMRTQHPTKGFASVSE--------------------------------KAHKSTVWQVRHLPQNRELFLTAGGA 281 (357)
T ss_dssp TEEEEEEEEEEETTTEEEEEEE--------------------------------ECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred CeEEEEeCcCCCcccceeeecc--------------------------------CCCcCCEEEEEECCCCCcEEEEEeCC
Confidence 9999999988765544431000 23445599999999998 89999999
Q ss_pred CcEEEEEeCCCCcce---------------eee-eecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 444 GSVRLWAIESETKDI---------------QPL-YNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 444 g~v~vwd~~~~~~~~---------------~~~-~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
|.|++|++....... ..+ ....|...|++++|+|++++|+++++.||.|++|++.+.
T Consensus 282 g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 282 GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred CcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 999999998653221 112 222378899999999999999954499999999998754
No 26
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-40 Score=305.28 Aligned_cols=287 Identities=21% Similarity=0.298 Sum_probs=244.3
Q ss_pred ccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE
Q 010296 149 TDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV 228 (513)
Q Consensus 149 ~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 228 (513)
.+..+.+.+|.+.|++++| |++.+|++|+.||.|++|++.++.....+ ..|...|.+++|
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-------------------~~~~~~v~~~~~ 67 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVV-------------------YTGQGFLNSVCY 67 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEE-------------------EECSSCEEEEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEe-------------------ecCCccEEEEEE
Confidence 3566788999999999999 99999999999999999999887766543 578889999999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCc---ceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccC
Q 010296 229 SSDGRYLASGGLDRHIHLWDTRIQ---EHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQS 305 (513)
Q Consensus 229 s~~~~~l~s~~~dg~i~vwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 305 (513)
+|++++|++++.+|.|++|++... +.+..+.+|...|.+++| ++++|++++.||.|++|| .+..+..+..|..
T Consensus 68 ~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~ 143 (313)
T 3odt_A 68 DSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNA 143 (313)
T ss_dssp ETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSS
T ss_pred CCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCC
Confidence 999999999999999999998654 567788889999999999 567999999999999999 6777888889999
Q ss_pred CeEEEEeeC-C-CeEEEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeec
Q 010296 306 EVLTIDCLR-K-ERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKN 383 (513)
Q Consensus 306 ~v~~~~~~~-~-~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~ 383 (513)
.+.++.|.| + ..+++++.++.|++||...........+...+.+++|+|++.+++++.+|.|++||+.+++++..+..
T Consensus 144 ~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~ 223 (313)
T 3odt_A 144 SVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEG 223 (313)
T ss_dssp CEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred ceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhc
Confidence 999999988 4 47779999999999994433222333388899999999999999999999999999999998888753
Q ss_pred CCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeee
Q 010296 384 AHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYN 463 (513)
Q Consensus 384 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~ 463 (513)
|...|++++|+|++ .|++++.||.|++||+.++ ..+..+..
T Consensus 224 -------------------------------------~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~-~~~~~~~~ 264 (313)
T 3odt_A 224 -------------------------------------HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENG-SLKQVITL 264 (313)
T ss_dssp -------------------------------------CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTC-CEEEEEEC
T ss_pred -------------------------------------CCceEEEEEEecCC-CEEEEecCCEEEEEECCCC-ceeEEEec
Confidence 23349999999999 6899999999999999987 44444433
Q ss_pred cCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 464 LPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 464 ~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
|...|++++|+|+++ ++++ +.||.|++|++..+..
T Consensus 265 --~~~~i~~~~~~~~~~-~~~~-~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 265 --PAISIWSVDCMSNGD-IIVG-SSDNLVRIFSQEKSRW 299 (313)
T ss_dssp --SSSCEEEEEECTTSC-EEEE-ETTSCEEEEESCGGGC
T ss_pred --cCceEEEEEEccCCC-EEEE-eCCCcEEEEeCCCCce
Confidence 677899999999999 4555 7899999999876543
No 27
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.4e-40 Score=304.42 Aligned_cols=247 Identities=16% Similarity=0.305 Sum_probs=219.1
Q ss_pred CCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCC
Q 010296 215 RATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDR 294 (513)
Q Consensus 215 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 294 (513)
.+.+|...|++++|+|++++|++|+.||.|++||+.++..+..+..|..+|.+++|+|++++|++|+.|+.|++||+.++
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 87 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred eecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEeecccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeee--EEecCCCCeeEEEeecC-C-eEEEEeCCCCEEE
Q 010296 295 AYISTLFGHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRL--VFRAPASSLECCCFISN-D-EFLSGSDDGSIEL 369 (513)
Q Consensus 295 ~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~--~~~~~~~~v~~~~~~~~-~-~~~~~~~dg~i~i 369 (513)
+.+..+.+|...|.+++|+|++ .+++++.|++|++||+.++... .+..|...|.+++|+|. + .|++|+.|++|++
T Consensus 88 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~i 167 (304)
T 2ynn_A 88 EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKV 167 (304)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEE
T ss_pred cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 9999999999999999999987 5669999999999999876433 56788999999999994 4 5889999999999
Q ss_pred EecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEec--CCCEEEEecCCCcEE
Q 010296 370 WSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCG--GSDLAASGAGNGSVR 447 (513)
Q Consensus 370 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~g~~dg~v~ 447 (513)
||+.++.+...+...+ ...+..+.|+| ++.+|++|+.||+|+
T Consensus 168 wd~~~~~~~~~~~~~~------------------------------------~~~v~~~~~~~~~~~~~l~s~s~D~~i~ 211 (304)
T 2ynn_A 168 WSLGQSTPNFTLTTGQ------------------------------------ERGVNYVDYYPLPDKPYMITASDDLTIK 211 (304)
T ss_dssp EETTCSSCSEEEECCC------------------------------------TTCEEEEEECCSTTCCEEEEEETTSEEE
T ss_pred EECCCCCccceeccCC------------------------------------cCcEEEEEEEEcCCCCEEEEEcCCCeEE
Confidence 9999887776665332 23388888886 778999999999999
Q ss_pred EEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCc
Q 010296 448 LWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 448 vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
|||+.++ ..+..+.. |...|.+++|+|++++|+++ +.||+|++|+..+..
T Consensus 212 iWd~~~~-~~~~~~~~--h~~~v~~~~~~p~~~~l~s~-s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 212 IWDYQTK-SCVATLEG--HMSNVSFAVFHPTLPIIISG-SEDGTLKIWNSSTYK 261 (304)
T ss_dssp EEETTTT-EEEEEEEC--CSSCEEEEEECSSSSEEEEE-ETTSCEEEEETTTCC
T ss_pred EEeCCCC-ccceeeCC--CCCCEEEEEECCCCCEEEEE-cCCCeEEEEECCCCc
Confidence 9999987 44444543 88899999999999999999 999999999987654
No 28
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=306.10 Aligned_cols=245 Identities=20% Similarity=0.297 Sum_probs=223.7
Q ss_pred hhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC
Q 010296 152 FRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD 231 (513)
Q Consensus 152 ~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 231 (513)
...+.+|...|.+++|+|++.++++++.|++|++||+.+++.+..+ ..|...+.+++|+|+
T Consensus 73 ~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~-------------------~~~~~~~~~~~~spd 133 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSI-------------------DAGPVDAWTLAFSPD 133 (321)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE-------------------ECCTTCCCCEEECTT
T ss_pred eeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEE-------------------eCCCccEEEEEECCC
Confidence 4467899999999999999999999999999999999998877654 456777899999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEEE
Q 010296 232 GRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTID 311 (513)
Q Consensus 232 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 311 (513)
+++|++|+.+|.|++|++.+++....+..|...|.+++|+|++++|++++.||.|++||+.+++.+..+.+|..+|.+++
T Consensus 134 g~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~ 213 (321)
T 3ow8_A 134 SQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 213 (321)
T ss_dssp SSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEE
T ss_pred CCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCe-EEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEeecCCCcc
Q 010296 312 CLRKER-VLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVKNAHPLL 388 (513)
Q Consensus 312 ~~~~~~-~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 388 (513)
|+|++. +++++.|+.|++||++..... .+..|...|.+++|+|++. |++++.|++|+|||+.+++++..+..
T Consensus 214 ~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~----- 288 (321)
T 3ow8_A 214 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD----- 288 (321)
T ss_dssp ECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-----
T ss_pred EcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC-----
Confidence 999885 558889999999999887665 6678889999999999985 88999999999999999999888743
Q ss_pred cCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeC
Q 010296 389 DGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIE 452 (513)
Q Consensus 389 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~ 452 (513)
|...|.+++|+|++++|++++.||.|+|||+.
T Consensus 289 --------------------------------h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 289 --------------------------------HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp --------------------------------CSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred --------------------------------CCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 33449999999999999999999999999963
No 29
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=9.8e-41 Score=317.70 Aligned_cols=306 Identities=19% Similarity=0.293 Sum_probs=241.8
Q ss_pred hhhccCCCeEEEEECCC----CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEc
Q 010296 154 VLLKHRQSVTAVALSED----DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVS 229 (513)
Q Consensus 154 ~~~~h~~~V~~~~~s~~----~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 229 (513)
...+|.++|++++|+|+ ...+++++.++.|++|++.++..+..+. .+ ....|...|++++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~-------~~-------~~~~~~~~v~~~~~~ 78 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQ-------SY-------VDADADENFYTCAWT 78 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEE-------EE-------ECSCTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeee-------ec-------cccCCCCcEEEEEec
Confidence 34489999999999984 5567777777899999999877655431 00 112367889999999
Q ss_pred CC----CCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEec-CCCeEEEEeCCCcEEEEeCCCCceeEEe---e
Q 010296 230 SD----GRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQ-GTSELFSGSFDRTVKIWNAEDRAYISTL---F 301 (513)
Q Consensus 230 ~~----~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~ 301 (513)
|+ +.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.||.|++||+.+++.+..+ .
T Consensus 79 ~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 158 (366)
T 3k26_A 79 YDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVE 158 (366)
T ss_dssp ECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTT
T ss_pred cCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccc
Confidence 98 67999999999999999999999999999999999999999 8999999999999999999999988887 6
Q ss_pred cccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeee-----------------------------EEecCCCCeeEEE
Q 010296 302 GHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRL-----------------------------VFRAPASSLECCC 351 (513)
Q Consensus 302 ~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~-----------------------------~~~~~~~~v~~~~ 351 (513)
.|...|.+++|+|++ .+++++.|+.|++||+.+.... ....|...|.+++
T Consensus 159 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 238 (366)
T 3k26_A 159 GHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR 238 (366)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEE
T ss_pred cccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEE
Confidence 899999999999987 5668999999999999875432 1223788999999
Q ss_pred eecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEe
Q 010296 352 FISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVC 431 (513)
Q Consensus 352 ~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 431 (513)
|+ ...+++++.||.|++||+.++............ .... ......|...|++++|+
T Consensus 239 ~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~------------~~~~-----------~~~~~~~~~~v~~~~~s 294 (366)
T 3k26_A 239 WL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSES------------NVTI-----------LGRFDYSQCDIWYMRFS 294 (366)
T ss_dssp EE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCC------------CEEE-----------EEEEECSSCCSSCCCCE
T ss_pred Ec-CCEEEEEecCCEEEEEeCCCccccccccccCCc------------chhe-----------eccccccCCcEEEEEEc
Confidence 99 557899999999999999876541110000000 0000 00002344558999999
Q ss_pred cC--CCEEEEecCCCcEEEEEeCCCCcce---eeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccC
Q 010296 432 GG--SDLAASGAGNGSVRLWAIESETKDI---QPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHL 498 (513)
Q Consensus 432 ~~--~~~l~~g~~dg~v~vwd~~~~~~~~---~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~ 498 (513)
|+ +++|++|+.||.|++||+.++.... ..+....+...|++++|+|++++|+++ +.||.|++|++.
T Consensus 295 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~ 365 (366)
T 3k26_A 295 MDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAV-CDDASIWRWDRL 365 (366)
T ss_dssp ECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEE-ETTSEEEEEEC-
T ss_pred CCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEE-eCCCEEEEEEec
Confidence 99 9999999999999999999873221 133332237899999999999999999 899999999975
No 30
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.8e-39 Score=328.47 Aligned_cols=286 Identities=26% Similarity=0.409 Sum_probs=240.4
Q ss_pred chhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC
Q 010296 151 EFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS 230 (513)
Q Consensus 151 ~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 230 (513)
+.+.|.+|++.|+||+|+|+|++||+|+.|++|+|||. +++.+..+ .+|...|++++|+|
T Consensus 8 e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l-------------------~gh~~~V~~l~fsp 67 (577)
T 2ymu_A 8 ERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL-------------------TGHSSSVWGVAFSP 67 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEE-------------------ECCSSCEEEEEECT
T ss_pred EeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEE-------------------eCCCCCEEEEEECC
Confidence 34568899999999999999999999999999999995 55555543 68999999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCce--------------
Q 010296 231 DGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAY-------------- 296 (513)
Q Consensus 231 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-------------- 296 (513)
++++|++++.|++|+|||+ +++.+..+.+|...|.+++|+|++++|++++.|+.+++|+......
T Consensus 68 dg~~las~~~d~~i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~ 146 (577)
T 2ymu_A 68 DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVA 146 (577)
T ss_dssp TSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEE
T ss_pred CCCEEEEEeCCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeee
Confidence 9999999999999999996 5788899999999999999999999999999999999999653211
Q ss_pred --------------------------eEEeecccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeeeEEecCCCCeeE
Q 010296 297 --------------------------ISTLFGHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRLVFRAPASSLEC 349 (513)
Q Consensus 297 --------------------------~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~ 349 (513)
......+...|.++.++|++ .+++++.++.|++|+........+..|...+.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~ 226 (577)
T 2ymu_A 147 FSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRG 226 (577)
T ss_dssp ECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEE
T ss_pred eecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCCcEEEEEecCCCCEEE
Confidence 11223466778888888887 466888999999999876666678888999999
Q ss_pred EEeecCCe-EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEE
Q 010296 350 CCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSV 428 (513)
Q Consensus 350 ~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~ 428 (513)
++|+|++. +++++.|+.|++|+. +++.+..+. .|...|+++
T Consensus 227 ~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~-------------------------------------~~~~~v~~v 268 (577)
T 2ymu_A 227 VAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-------------------------------------GHSSSVNGV 268 (577)
T ss_dssp EEECTTSSCEEEEETTSCEEEECT-TSCEEEEEC-------------------------------------CCSSCEEEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEe-------------------------------------cCCCCEEEE
Confidence 99999985 789999999999995 445555543 334459999
Q ss_pred EEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 429 TVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 429 ~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
+|+|++++|++++.|+.|++|+.... .+..+. .|...|.+++|+|++++|+++ +.|+.|++|+....
T Consensus 269 ~~~~d~~~l~~~~~d~~i~~w~~~~~--~~~~~~--~h~~~v~~~~~~~~~~~l~t~-~~d~~i~~w~~~~~ 335 (577)
T 2ymu_A 269 AFRPDGQTIASASDDKTVKLWNRNGQ--LLQTLT--GHSSSVWGVAFSPDGQTIASA-SDDKTVKLWNRNGQ 335 (577)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTSC--EEEEEC--CCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTSC
T ss_pred EEcCCCCEEEEEeCCCEEEEEeCCCc--EEEEEe--cCCCCeEEEEECCCCCEEEEE-eCCCeEEEEeCCCC
Confidence 99999999999999999999997543 344443 378899999999999999999 89999999997543
No 31
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-40 Score=318.55 Aligned_cols=295 Identities=14% Similarity=0.218 Sum_probs=244.0
Q ss_pred hhccCCCeEEEEECCCCC-eEEEEeCCceEEEEeC----CCCcc------ccccCCChhhhccCCCCCCCCCCCCCcccE
Q 010296 155 LLKHRQSVTAVALSEDDS-KGFSASKDGSILHWDV----SSGKG------VKYLWPSEEVLKSHGAKDPQGRATKQSKHI 223 (513)
Q Consensus 155 ~~~h~~~V~~~~~s~~~~-~l~t~~~dg~v~iwd~----~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 223 (513)
...|.+.|++++|+|+++ +|++|+.||.|++|++ .++.. ...+.. .........+|...|
T Consensus 41 ~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~v 111 (425)
T 1r5m_A 41 EIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRH---------PFALSASSGKTTNQV 111 (425)
T ss_dssp EEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEEC---------CCCCC------CBCE
T ss_pred eeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccc---------cccccccccCCCCce
Confidence 345679999999999999 9999999999999999 87773 222200 000001123478899
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecc
Q 010296 224 LALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGH 303 (513)
Q Consensus 224 ~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 303 (513)
++++|+|++++|++|+.+|.|++|+ .+++.+..+..|...|.+++|+|++++|++++.|+.|++||+.+++.+..+..+
T Consensus 112 ~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 190 (425)
T 1r5m_A 112 TCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELK 190 (425)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeecc
Confidence 9999999999999999999999999 678888899999999999999999999999999999999999999998888877
Q ss_pred cCC---------------eEEEEeeCCCeEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe-EEEEeCCCC
Q 010296 304 QSE---------------VLTIDCLRKERVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE-FLSGSDDGS 366 (513)
Q Consensus 304 ~~~---------------v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~-~~~~~~dg~ 366 (513)
... +.++.|++++.+++++.++.|++|++.+.... .+..|...+.+++|+|++. |++++.||.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 270 (425)
T 1r5m_A 191 ETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGT 270 (425)
T ss_dssp ---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred ccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCE
Confidence 776 99999999999999999999999999987665 5667889999999999985 789999999
Q ss_pred EEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcE
Q 010296 367 IELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSV 446 (513)
Q Consensus 367 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v 446 (513)
|++||+.+++++..+.. |...|.+++|+|++ +|++++.||.|
T Consensus 271 i~i~d~~~~~~~~~~~~-------------------------------------~~~~i~~~~~~~~~-~l~~~~~d~~i 312 (425)
T 1r5m_A 271 LRIWHGGNGNSQNCFYG-------------------------------------HSQSIVSASWVGDD-KVISCSMDGSV 312 (425)
T ss_dssp EEEECSSSBSCSEEECC-------------------------------------CSSCEEEEEEETTT-EEEEEETTSEE
T ss_pred EEEEECCCCccceEecC-------------------------------------CCccEEEEEECCCC-EEEEEeCCCcE
Confidence 99999999888777642 23349999999999 99999999999
Q ss_pred EEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCc
Q 010296 447 RLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 447 ~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
++||+.++ ..+..+. .|...|.+++|+|++++|+++ +.||.|++|++....
T Consensus 313 ~i~d~~~~-~~~~~~~--~~~~~i~~~~~s~~~~~l~~~-~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 313 RLWSLKQN-TLLALSI--VDGVPIFAGRISQDGQKYAVA-FMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEETTTT-EEEEEEE--CTTCCEEEEEECTTSSEEEEE-ETTSCEEEEECHHHH
T ss_pred EEEECCCC-cEeEecc--cCCccEEEEEEcCCCCEEEEE-ECCCeEEEEECCCCc
Confidence 99999887 3343333 367899999999999999999 899999999986543
No 32
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.3e-40 Score=322.37 Aligned_cols=308 Identities=13% Similarity=0.118 Sum_probs=229.9
Q ss_pred hhhhhccCCCeEEEEECC-CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC
Q 010296 152 FRVLLKHRQSVTAVALSE-DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS 230 (513)
Q Consensus 152 ~~~~~~h~~~V~~~~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 230 (513)
.....+|...|+||+|+| ++++||+|+.||+|+|||+.++.....+ ...+|...|++|+|+|
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~-----------------~~~gH~~~V~~l~f~p 174 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFI-----------------KGIGAGGSITGLKFNP 174 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEE-----------------CCCSSSCCCCEEEECS
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEE-----------------EccCCCCCEEEEEEeC
Confidence 345567999999999999 5679999999999999999887654433 3468999999999998
Q ss_pred -CCCEEEEEeCCCcEEEEeCCCcceeeecc--CcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCe
Q 010296 231 -DGRYLASGGLDRHIHLWDTRIQEHIQAFP--GHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEV 307 (513)
Q Consensus 231 -~~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v 307 (513)
++.+|++|+.||+|++||+.++....... .+...+.+++|+|++.+|++|+.||.|++||++. +.+..+.+|...|
T Consensus 175 ~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v 253 (435)
T 4e54_B 175 LNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKV 253 (435)
T ss_dssp SCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCE
T ss_pred CCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceE
Confidence 68999999999999999998765443333 2445678999999999999999999999999964 5677788999999
Q ss_pred EEEEeeCCC--eEEEEeCCCcEEEEecCCCeee----EEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEE
Q 010296 308 LTIDCLRKE--RVLTVGRDRSMQLWKVPEESRL----VFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYI 380 (513)
Q Consensus 308 ~~~~~~~~~--~~~~~~~d~~i~iwd~~~~~~~----~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~ 380 (513)
.+++|+|++ .+++++.|+.|++||++..... ....|...|.+++|+|++. |++++.||.|+|||+.++.....
T Consensus 254 ~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~ 333 (435)
T 4e54_B 254 THVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLG 333 (435)
T ss_dssp EEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEE
T ss_pred EeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceE
Confidence 999999976 4558899999999999875432 3456888999999999985 88999999999999999887776
Q ss_pred eecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec-CCCcEEEEEeCCCCccee
Q 010296 381 VKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA-GNGSVRLWAIESETKDIQ 459 (513)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~-~dg~v~vwd~~~~~~~~~ 459 (513)
+........... ..+... ......+..+.+++++.++++++ .++.|++||+.++ ..+.
T Consensus 334 ~~~~~~~~~~~~------~~~~~~--------------~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g-~~~~ 392 (435)
T 4e54_B 334 LIPHPHRHFQHL------TPIKAA--------------WHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSG-KMMC 392 (435)
T ss_dssp ECCCCCCCCSSS------CCCBCE--------------ECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSC-CEEE
T ss_pred Eecccccccccc------eeEEEE--------------EcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCC-cEEE
Confidence 643221100000 000000 00011134445555555544444 3468999999988 3333
Q ss_pred eeeecCcccEEEEE-EeecCCCEEEEEecCCCcccccccCCCc
Q 010296 460 PLYNLPLVGFVNSL-AFAKSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 460 ~~~~~~~~~~v~~v-~~sp~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
.+. .+|...|.++ +|+|+|.+|++| + |+.|+||+...+.
T Consensus 393 ~l~-~~~~~~v~s~~~fspdg~~lasg-~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 393 QLY-DPESSGISSLNEFNPMGDTLASA-M-GYHILIWSQQEAR 432 (435)
T ss_dssp EEC-CSSCCCCCCEEEECTTSSCEEEE-C-SSEEEECCCC---
T ss_pred EEe-CCCCCcEEEEEEECCCCCEEEEE-c-CCcEEEEECCcCe
Confidence 332 2467778887 699999999876 4 7799999987764
No 33
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-40 Score=321.25 Aligned_cols=287 Identities=14% Similarity=0.204 Sum_probs=241.5
Q ss_pred ccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCC----ccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC-
Q 010296 157 KHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSG----KGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD- 231 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~- 231 (513)
.|...|++++|+|++.+|++|+.||.|++|++.+. ..+. .+.+|...|++++|+|+
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~-------------------~~~~h~~~v~~~~~~~~~ 125 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMA-------------------RFSNHSSSVKTVKFNAKQ 125 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEE-------------------ECCCSSSCCCEEEECSSS
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchh-------------------hccCCccceEEEEEcCCC
Confidence 68999999999999999999999999999999872 2333 24678999999999998
Q ss_pred CCEEEEEeCCCcEEEEeCCCcc------eee---eccCcCCCeEEEEEecC-CCeEEEEeCCCcEEEEeCCCCceeEEee
Q 010296 232 GRYLASGGLDRHIHLWDTRIQE------HIQ---AFPGHRGPVSCLTFRQG-TSELFSGSFDRTVKIWNAEDRAYISTLF 301 (513)
Q Consensus 232 ~~~l~s~~~dg~i~vwd~~~~~------~~~---~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 301 (513)
+.+|++++.|+.|++||+.+++ ... .+..|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+.
T Consensus 126 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 205 (416)
T 2pm9_A 126 DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLS 205 (416)
T ss_dssp TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEe
Confidence 8999999999999999999876 332 34679999999999999 7889999999999999999999988887
Q ss_pred cc------cCCeEEEEeeCCC--eEEEEeCCC---cEEEEecCCC-eee-EEe-cCCCCeeEEEeec-CCe-EEEEeCCC
Q 010296 302 GH------QSEVLTIDCLRKE--RVLTVGRDR---SMQLWKVPEE-SRL-VFR-APASSLECCCFIS-NDE-FLSGSDDG 365 (513)
Q Consensus 302 ~~------~~~v~~~~~~~~~--~~~~~~~d~---~i~iwd~~~~-~~~-~~~-~~~~~v~~~~~~~-~~~-~~~~~~dg 365 (513)
.+ ...|.+++|+|++ .+++++.++ .|++||+++. ... .+. .|...+.+++|+| ++. |++++.||
T Consensus 206 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg 285 (416)
T 2pm9_A 206 YTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN 285 (416)
T ss_dssp CCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS
T ss_pred ccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCC
Confidence 66 7889999999986 566888888 9999999885 333 445 6889999999999 664 88999999
Q ss_pred CEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCC-CEEEEecCCC
Q 010296 366 SIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGS-DLAASGAGNG 444 (513)
Q Consensus 366 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~g~~dg 444 (513)
.|++||+.+++++..+..+ ...|++++|+|++ .+|++++.||
T Consensus 286 ~v~~wd~~~~~~~~~~~~~-------------------------------------~~~v~~~~~s~~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 286 TVLLWNPESAEQLSQFPAR-------------------------------------GNWCFKTKFAPEAPDLFACASFDN 328 (416)
T ss_dssp EEEEECSSSCCEEEEEECS-------------------------------------SSCCCCEEECTTCTTEEEECCSSS
T ss_pred CEEEeeCCCCccceeecCC-------------------------------------CCceEEEEECCCCCCEEEEEecCC
Confidence 9999999999988887532 3349999999999 8999999999
Q ss_pred cEEEEEeCCCCcceeeee--------------e------------------cCcccEEEEEEeecCCCEEEEEecCCCcc
Q 010296 445 SVRLWAIESETKDIQPLY--------------N------------------LPLVGFVNSLAFAKSGQFLIAGVGQEPRL 492 (513)
Q Consensus 445 ~v~vwd~~~~~~~~~~~~--------------~------------------~~~~~~v~~v~~sp~~~~l~~~~~~dg~v 492 (513)
.|+||++.+......... . ..+..++++++|+|+|++|+++ +.|+.|
T Consensus 329 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~-~~d~~v 407 (416)
T 2pm9_A 329 KIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQIT-PDGKGV 407 (416)
T ss_dssp EEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBC-TTSSCB
T ss_pred cEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEe-CCCCeE
Confidence 999999987632221100 0 0045677899999999999999 899999
Q ss_pred cccccCCC
Q 010296 493 GRWGHLPA 500 (513)
Q Consensus 493 ~~W~~~~~ 500 (513)
+||++.++
T Consensus 408 ~~w~~~~~ 415 (416)
T 2pm9_A 408 SITNPKIS 415 (416)
T ss_dssp CCBCCCCC
T ss_pred EEEEeccC
Confidence 99998764
No 34
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=304.16 Aligned_cols=245 Identities=14% Similarity=0.169 Sum_probs=207.8
Q ss_pred hccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEE
Q 010296 156 LKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYL 235 (513)
Q Consensus 156 ~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 235 (513)
..|...|++++|+|++ .|++|+.||+|+|||+.+++.+..+ .....+|...|++|+|+|++++|
T Consensus 79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~---------------~~~~~~H~~~V~~v~~spdg~~l 142 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVS---------------KFCKYEHDDIVSTVSVLSSGTQA 142 (344)
T ss_dssp EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEE---------------EEEEECCSSCEEEEEECTTSSEE
T ss_pred eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEe---------------eccccCCCCCEEEEEECCCCCEE
Confidence 3467889999999985 6889999999999999988765432 00234799999999999999999
Q ss_pred EEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCC-eEEEEeCCCcEEEEeCCCCceeEEee--cccCCeEEEEe
Q 010296 236 ASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTS-ELFSGSFDRTVKIWNAEDRAYISTLF--GHQSEVLTIDC 312 (513)
Q Consensus 236 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~ 312 (513)
++|+.|++|++||+.+++++..+.+|...|++++|+|++. +|++++.|++|++||+++++.+..+. .+...+.+++|
T Consensus 143 ~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 222 (344)
T 4gqb_B 143 VSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAW 222 (344)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeee
Confidence 9999999999999999999999999999999999999885 67899999999999999998887764 35567899999
Q ss_pred eCC-Ce-EEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCC-e-EEEEeCCCCEEEEecCCCCeeEEeecCCCc
Q 010296 313 LRK-ER-VLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISND-E-FLSGSDDGSIELWSLLRKKPVYIVKNAHPL 387 (513)
Q Consensus 313 ~~~-~~-~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~-~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 387 (513)
+|+ +. +++++.|+.|++||+++++.+ .+..|...|.+++|+|++ . |++|+.|++|+|||+.+++.+. +
T Consensus 223 ~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~------ 295 (344)
T 4gqb_B 223 HPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-S------ 295 (344)
T ss_dssp CSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-E------
T ss_pred cCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-E------
Confidence 985 44 568899999999999987765 678899999999999987 3 7799999999999999887543 2
Q ss_pred ccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCC-EEEEecCCCcEEEEEeCCC
Q 010296 388 LDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSD-LAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 388 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~g~~dg~v~vwd~~~~ 454 (513)
..|...|++++|+|++. +|++|+.||+|++|++.+.
T Consensus 296 -------------------------------~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 296 -------------------------------QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp -------------------------------CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred -------------------------------cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 34445599999999986 6779999999999999875
No 35
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.4e-39 Score=302.10 Aligned_cols=248 Identities=20% Similarity=0.362 Sum_probs=219.6
Q ss_pred CCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCC-
Q 010296 216 ATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDR- 294 (513)
Q Consensus 216 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~- 294 (513)
+.+|...|++++|+|++++|++|+.||+|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|++|++.+.
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~ 130 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE 130 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCS
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCC
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred ---ceeEEeecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe-EEEEeCCCCEEE
Q 010296 295 ---AYISTLFGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE-FLSGSDDGSIEL 369 (513)
Q Consensus 295 ---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~i 369 (513)
.....+.+|...|.++.|++++.+++++.|+.|++||+.++... .+..|...|.+++|+|++. +++|+.|+.|++
T Consensus 131 ~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~ 210 (340)
T 1got_B 131 GNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210 (340)
T ss_dssp BSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEE
Confidence 34566788999999999999999999999999999999988766 5677889999999999986 779999999999
Q ss_pred EecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEE
Q 010296 370 WSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLW 449 (513)
Q Consensus 370 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vw 449 (513)
||+.++.++..+.. |...|++++|+|++++|++|+.||+|+||
T Consensus 211 wd~~~~~~~~~~~~-------------------------------------h~~~v~~v~~~p~~~~l~s~s~d~~v~iw 253 (340)
T 1got_B 211 WDVREGMCRQTFTG-------------------------------------HESDINAICFFPNGNAFATGSDDATCRLF 253 (340)
T ss_dssp EETTTCSEEEEECC-------------------------------------CSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EECCCCeeEEEEcC-------------------------------------CcCCEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 99999988887743 33449999999999999999999999999
Q ss_pred EeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 450 AIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 450 d~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
|+.+. ..+..+....+...|++++|+|+|++|+++ +.||.|++|+......
T Consensus 254 d~~~~-~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g-~~d~~i~vwd~~~~~~ 304 (340)
T 1got_B 254 DLRAD-QELMTYSHDNIICGITSVSFSKSGRLLLAG-YDDFNCNVWDALKADR 304 (340)
T ss_dssp ETTTT-EEEEEECCTTCCSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCE
T ss_pred ECCCC-cEEEEEccCCcccceEEEEECCCCCEEEEE-CCCCeEEEEEcccCcE
Confidence 99887 333333322234579999999999999999 8999999999876654
No 36
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-39 Score=314.54 Aligned_cols=280 Identities=14% Similarity=0.227 Sum_probs=241.6
Q ss_pred cCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEE
Q 010296 158 HRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLAS 237 (513)
Q Consensus 158 h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 237 (513)
|.+.|++++|+|++++|++|+.||.|++|+ .++..+..+ ..|...|++++|+|++++|++
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~-------------------~~~~~~v~~~~~~~~~~~l~~ 166 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVL-------------------NFHRAPIVSVKWNKDGTHIIS 166 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEE-------------------CCCCSCEEEEEECTTSSEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeec-------------------cCCCccEEEEEECCCCCEEEE
Confidence 788999999999999999999999999999 445544433 578899999999999999999
Q ss_pred EeCCCcEEEEeCCCcceeeeccCcCCC---------------eEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeec
Q 010296 238 GGLDRHIHLWDTRIQEHIQAFPGHRGP---------------VSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFG 302 (513)
Q Consensus 238 ~~~dg~i~vwd~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 302 (513)
++.++.|++||+.+++.+..+..+... +.+++|+|++ .+++++.+|.|++||+.+++.+..+..
T Consensus 167 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~ 245 (425)
T 1r5m_A 167 MDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIG 245 (425)
T ss_dssp EETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECC
T ss_pred EecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeecc
Confidence 999999999999999999988887776 9999999974 688999999999999999999999999
Q ss_pred ccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEE
Q 010296 303 HQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYI 380 (513)
Q Consensus 303 ~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~ 380 (513)
|...|.+++|+|++ .+++++.++.|++|++.+.... .+..+...+.+++|+|++.+++++.||.|++||+.+++++..
T Consensus 246 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 246 HHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEe
Confidence 99999999999987 5668889999999999887655 556688999999999999888999999999999999988887
Q ss_pred eecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCc----
Q 010296 381 VKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETK---- 456 (513)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~---- 456 (513)
+... ...|.+++|+|++++|++++.||.|++|++.+...
T Consensus 326 ~~~~-------------------------------------~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~ 368 (425)
T 1r5m_A 326 SIVD-------------------------------------GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRS 368 (425)
T ss_dssp EECT-------------------------------------TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC----
T ss_pred cccC-------------------------------------CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceee
Confidence 7532 23399999999999999999999999999987620
Q ss_pred ---------------ceeeeeecCccc--EEEEEEeecCCCEEEEEecCCCcccccccC
Q 010296 457 ---------------DIQPLYNLPLVG--FVNSLAFAKSGQFLIAGVGQEPRLGRWGHL 498 (513)
Q Consensus 457 ---------------~~~~~~~~~~~~--~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~ 498 (513)
.+..+.. |.. .|++++|+|++++|+++ +.||.|++|++.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~ 424 (425)
T 1r5m_A 369 LYGNRDGILNPLPIPLYASYQS--SQDNDYIFDLSWNCAGNKISVA-YSLQEGSVVAIP 424 (425)
T ss_dssp ----------CEECCEEEEECC--TTCCCCEEEEEECTTSSEEEEE-ESSSCCEEEECC
T ss_pred eecccccccCcccchhhhhhcC--cccCCceEEEEccCCCceEEEE-ecCceEEEEeec
Confidence 2233322 433 89999999999999999 899999999874
No 37
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.7e-39 Score=307.60 Aligned_cols=288 Identities=14% Similarity=0.131 Sum_probs=239.1
Q ss_pred hhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCc--cccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCC
Q 010296 155 LLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGK--GVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDG 232 (513)
Q Consensus 155 ~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 232 (513)
+..|.++|++++|+|++++|++|+.|+.|++|++.+++ .+..+ .+|...|++++|+|++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-------------------~~h~~~v~~~~~~~~~ 64 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHEL-------------------KEHNGQVTGVDWAPDS 64 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEE-------------------ECCSSCEEEEEEETTT
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeee-------------------cCCCCcccEEEEeCCC
Confidence 44699999999999999999999999999999998876 44433 5789999999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCcceee--eccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCce---e-EEeecccCC
Q 010296 233 RYLASGGLDRHIHLWDTRIQEHIQ--AFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAY---I-STLFGHQSE 306 (513)
Q Consensus 233 ~~l~s~~~dg~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~-~~~~~~~~~ 306 (513)
++|++++.||.|++||+.+++... .+..|...|.+++|+|++++|++++.|+.|++||+..+.. . .....|...
T Consensus 65 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~ 144 (372)
T 1k8k_C 65 NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRST 144 (372)
T ss_dssp TEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSC
T ss_pred CEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCC
Confidence 999999999999999998886543 3466999999999999999999999999999999988763 2 333568899
Q ss_pred eEEEEeeCCC-eEEEEeCCCcEEEEecC------------------CCeee-EEecCCCCeeEEEeecCCe-EEEEeCCC
Q 010296 307 VLTIDCLRKE-RVLTVGRDRSMQLWKVP------------------EESRL-VFRAPASSLECCCFISNDE-FLSGSDDG 365 (513)
Q Consensus 307 v~~~~~~~~~-~~~~~~~d~~i~iwd~~------------------~~~~~-~~~~~~~~v~~~~~~~~~~-~~~~~~dg 365 (513)
|.+++|+|++ .+++++.++.|++||+. .+... .+..|...+.+++|+|++. |++++.||
T Consensus 145 i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 224 (372)
T 1k8k_C 145 VLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS 224 (372)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT
T ss_pred eeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC
Confidence 9999999987 56688899999999964 34443 4557888999999999984 88999999
Q ss_pred CEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCc
Q 010296 366 SIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGS 445 (513)
Q Consensus 366 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~ 445 (513)
.|++||+.+++++..+... ...|.+++|+|++.+|++| .||.
T Consensus 225 ~i~i~d~~~~~~~~~~~~~-------------------------------------~~~v~~~~~~~~~~~l~~~-~d~~ 266 (372)
T 1k8k_C 225 TVCLADADKKMAVATLASE-------------------------------------TLPLLAVTFITESSLVAAG-HDCF 266 (372)
T ss_dssp EEEEEEGGGTTEEEEEECS-------------------------------------SCCEEEEEEEETTEEEEEE-TTSS
T ss_pred EEEEEECCCCceeEEEccC-------------------------------------CCCeEEEEEecCCCEEEEE-eCCe
Confidence 9999999999988887533 2339999999999988888 8999
Q ss_pred EEEEEeCC--CCc-c-----------------e----------e--------eeeecCcccEEEEEEee-cCC---CEEE
Q 010296 446 VRLWAIES--ETK-D-----------------I----------Q--------PLYNLPLVGFVNSLAFA-KSG---QFLI 483 (513)
Q Consensus 446 v~vwd~~~--~~~-~-----------------~----------~--------~~~~~~~~~~v~~v~~s-p~~---~~l~ 483 (513)
|++|++.. +.- . + . ......|..+|++++|+ ++| .+|+
T Consensus 267 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~ 346 (372)
T 1k8k_C 267 PVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFC 346 (372)
T ss_dssp CEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEE
T ss_pred EEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEE
Confidence 99999987 310 0 0 0 00112588899999976 666 8999
Q ss_pred EEecCCCcccccccCCC
Q 010296 484 AGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 484 ~~~~~dg~v~~W~~~~~ 500 (513)
++ +.||.|++|++...
T Consensus 347 s~-~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 347 TT-GMDGGMSIWDVRSL 362 (372)
T ss_dssp EE-ETTSEEEEEEHHHH
T ss_pred Ee-cCCCceEEEEecCh
Confidence 98 99999999997653
No 38
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.1e-39 Score=314.65 Aligned_cols=282 Identities=18% Similarity=0.256 Sum_probs=237.4
Q ss_pred CCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEe
Q 010296 160 QSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGG 239 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 239 (513)
..+++++|+|++++|++++.||.|++|++.++.....+ ..| ..+....|+|++++|++|+
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~-------------------~~~-~~~~~~~~~~~~~~l~~~~ 116 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKML-------------------KRA-DYTAVDTAKLQMRRFILGT 116 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTS-------------------CSC-CEEEEEEECSSSCEEEEEE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEE-------------------ecC-CceEEEEEecCCCEEEEEE
Confidence 44668999999999999999999999999887765433 233 4455667899999999999
Q ss_pred CCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeCCC-eE
Q 010296 240 LDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRKE-RV 318 (513)
Q Consensus 240 ~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~ 318 (513)
.||.|++||+.+++.+..+.+|...|++++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++ .+
T Consensus 117 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 196 (420)
T 3vl1_A 117 TEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNV 196 (420)
T ss_dssp TTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987 56
Q ss_pred EEEeCCCcEEEEecCCCeeeEEec----CCC---------------------CeeEEEeecCCe-EEEEeCCCCEEEEec
Q 010296 319 LTVGRDRSMQLWKVPEESRLVFRA----PAS---------------------SLECCCFISNDE-FLSGSDDGSIELWSL 372 (513)
Q Consensus 319 ~~~~~d~~i~iwd~~~~~~~~~~~----~~~---------------------~v~~~~~~~~~~-~~~~~~dg~i~iwd~ 372 (513)
++++.|+.|++||+.++....... +.. .+.+++|+|++. +++++.||.|++||+
T Consensus 197 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 276 (420)
T 3vl1_A 197 LSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNV 276 (420)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEET
T ss_pred EEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEEC
Confidence 689999999999999887663322 333 344455577885 779999999999999
Q ss_pred CCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCC-EEEEecCCCcEEEEEe
Q 010296 373 LRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSD-LAASGAGNGSVRLWAI 451 (513)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~g~~dg~v~vwd~ 451 (513)
.+++.+..+... |...|++++|+|++. +|++|+.||.|++||+
T Consensus 277 ~~~~~~~~~~~~------------------------------------~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~ 320 (420)
T 3vl1_A 277 FSKEQTIQLPSK------------------------------------FTCSCNSLTVDGNNANYIYAGYENGMLAQWDL 320 (420)
T ss_dssp TTCCEEEEECCT------------------------------------TSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred CCCceeEEcccc------------------------------------cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEc
Confidence 999888777532 334499999999998 9999999999999999
Q ss_pred CCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 452 ESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
.++..++..+.. .+...|+++.| |++++|+++ +.||.|++|++...
T Consensus 321 ~~~~~~~~~~~~-~~~~~v~~~~~-~~~~~l~s~-~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 321 RSPECPVGEFLI-NEGTPINNVYF-AAGALFVSS-GFDTSIKLDIISDP 366 (420)
T ss_dssp TCTTSCSEEEEE-STTSCEEEEEE-ETTEEEEEE-TTTEEEEEEEECCT
T ss_pred CCCcCchhhhhc-cCCCCceEEEe-CCCCEEEEe-cCCccEEEEeccCC
Confidence 987544444443 25678888855 578888888 99999999998764
No 39
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6e-39 Score=309.17 Aligned_cols=287 Identities=18% Similarity=0.272 Sum_probs=240.2
Q ss_pred hhccCCCe--EEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCC
Q 010296 155 LLKHRQSV--TAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDG 232 (513)
Q Consensus 155 ~~~h~~~V--~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 232 (513)
..+|...+ .+++|++ ..+++++.|+.|++|++.++.....+ ...|...|++++|+|++
T Consensus 87 ~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~------------------~~~~~~~v~~v~~s~~~ 146 (401)
T 4aez_A 87 APGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALA------------------ETDESTYVASVKWSHDG 146 (401)
T ss_dssp CTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEE------------------ECCTTCCEEEEEECTTS
T ss_pred CCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEee------------------ecCCCCCEEEEEECCCC
Confidence 34676654 4455654 66889999999999999998876544 12478899999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCC-CCceeEEeecccCCeEEEE
Q 010296 233 RYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAE-DRAYISTLFGHQSEVLTID 311 (513)
Q Consensus 233 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~ 311 (513)
.+|++|+.+|.|++||+.+++.+..+.+|...|.+++|+ +.+|++++.||.|++||++ ....+..+.+|...|.+++
T Consensus 147 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 224 (401)
T 4aez_A 147 SFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLA 224 (401)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEE
T ss_pred CEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEE
Confidence 999999999999999999999999999999999999994 5789999999999999999 4667788889999999999
Q ss_pred eeCCC-eEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe--EEEEe--CCCCEEEEecCCCCeeEEeecCC
Q 010296 312 CLRKE-RVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE--FLSGS--DDGSIELWSLLRKKPVYIVKNAH 385 (513)
Q Consensus 312 ~~~~~-~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~--~~~~~--~dg~i~iwd~~~~~~~~~~~~~~ 385 (513)
|+|++ .+++++.|+.|++||+.+.... .+..|...+.+++|+|++. +++++ .|+.|++||+.+++++..+....
T Consensus 225 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~ 304 (401)
T 4aez_A 225 WRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGS 304 (401)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSS
T ss_pred EcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 99987 5668899999999999987766 5667889999999999763 45554 79999999999999888875322
Q ss_pred CcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEE--ecCCCcEEEEEeCCCCcceeeeee
Q 010296 386 PLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAAS--GAGNGSVRLWAIESETKDIQPLYN 463 (513)
Q Consensus 386 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~--g~~dg~v~vwd~~~~~~~~~~~~~ 463 (513)
.|++++|+|++++|++ |+.||.|+||++.++ ........
T Consensus 305 --------------------------------------~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~-~~~~~~~~ 345 (401)
T 4aez_A 305 --------------------------------------QVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS-GLTKQVDI 345 (401)
T ss_dssp --------------------------------------CEEEEEECSSSSEEEEEECTTTCEEEEEEEETT-EEEEEEEE
T ss_pred --------------------------------------cEEEEEECCCCCeEEEEeecCCCcEEEEecCCc-cceeEEEe
Confidence 2999999999999999 558999999999886 23333333
Q ss_pred cCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCccc
Q 010296 464 LPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAARN 503 (513)
Q Consensus 464 ~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~~ 503 (513)
..|.+.|.+++|+|++++|+++ +.||.|++|++..+...
T Consensus 346 ~~h~~~v~~~~~s~dg~~l~s~-~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 346 PAHDTRVLYSALSPDGRILSTA-ASDENLKFWRVYDGDHV 384 (401)
T ss_dssp ECCSSCCCEEEECTTSSEEEEE-CTTSEEEEEECCC----
T ss_pred cCCCCCEEEEEECCCCCEEEEE-eCCCcEEEEECCCCccc
Confidence 3478899999999999999999 89999999999876543
No 40
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.1e-39 Score=311.99 Aligned_cols=299 Identities=14% Similarity=0.176 Sum_probs=243.7
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCccc
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKH 222 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (513)
+|+.........+..| ..+....|+|++++|++|+.||.|++||+.++.....+ .+|...
T Consensus 82 i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------------------~~h~~~ 141 (420)
T 3vl1_A 82 LFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID-------------------QAHVSE 141 (420)
T ss_dssp EEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEET-------------------TSSSSC
T ss_pred EEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeec-------------------ccccCc
Confidence 4566666666677666 55666688999999999999999999999988766533 579999
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeec
Q 010296 223 ILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFG 302 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 302 (513)
|++++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..
T Consensus 142 v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 221 (420)
T 3vl1_A 142 ITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNR 221 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECB
T ss_pred cEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888764
Q ss_pred ---ccCCeE---------------------EEEeeCCCe-EEEEeCCCcEEEEecCCCeeeEE--ecCCCCeeEEEeecC
Q 010296 303 ---HQSEVL---------------------TIDCLRKER-VLTVGRDRSMQLWKVPEESRLVF--RAPASSLECCCFISN 355 (513)
Q Consensus 303 ---~~~~v~---------------------~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~ 355 (513)
+...+. +++|+|++. +++++.++.|++||+++...... ..+...+.+++|+|+
T Consensus 222 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 301 (420)
T 3vl1_A 222 KENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGN 301 (420)
T ss_dssp TTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSS
T ss_pred CCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCC
Confidence 333444 445567774 55888999999999998876533 346788999999999
Q ss_pred Ce--EEEEeCCCCEEEEecCCCCe-eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEec
Q 010296 356 DE--FLSGSDDGSIELWSLLRKKP-VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCG 432 (513)
Q Consensus 356 ~~--~~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 432 (513)
+. |++++.||.|++||+.+++. +..+...+. ..|+++.+ +
T Consensus 302 ~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~------------------------------------~~v~~~~~-~ 344 (420)
T 3vl1_A 302 NANYIYAGYENGMLAQWDLRSPECPVGEFLINEG------------------------------------TPINNVYF-A 344 (420)
T ss_dssp CTTEEEEEETTSEEEEEETTCTTSCSEEEEESTT------------------------------------SCEEEEEE-E
T ss_pred CCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCC------------------------------------CCceEEEe-C
Confidence 84 78999999999999998753 666654332 23888855 5
Q ss_pred CCCEEEEecCCCcEEEEEeCCCCccee------eeeecCcccEEEEEEeecCCC---EEEEEecCCCcccccccCC
Q 010296 433 GSDLAASGAGNGSVRLWAIESETKDIQ------PLYNLPLVGFVNSLAFAKSGQ---FLIAGVGQEPRLGRWGHLP 499 (513)
Q Consensus 433 ~~~~l~~g~~dg~v~vwd~~~~~~~~~------~~~~~~~~~~v~~v~~sp~~~---~l~~~~~~dg~v~~W~~~~ 499 (513)
++++|++++.||.|++|++.....+.. ......+.+.|.+++|+|+++ .|+++ |.+|.+.+|++..
T Consensus 345 ~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~-g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 345 AGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEV-GKNNFCALYNLSN 419 (420)
T ss_dssp TTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEE-ETTTEEEEEESCC
T ss_pred CCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEE-cCCceEEEEeccC
Confidence 788999999999999999987522211 112234678899999999999 77777 7889999998753
No 41
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.7e-39 Score=303.96 Aligned_cols=304 Identities=12% Similarity=0.147 Sum_probs=250.9
Q ss_pred hhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCC
Q 010296 153 RVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDG 232 (513)
Q Consensus 153 ~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 232 (513)
....+|.+.|++++|+|++.+|++++.||.|+||++.++...... .....|...|++++|+|++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~----------------~~~~~~~~~v~~~~~~~~~ 68 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDL----------------LQSLRYKHPLLCCNFIDNT 68 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEE----------------EEEEECSSCEEEEEEEESS
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccc----------------eeeeecCCceEEEEECCCC
Confidence 345589999999999999999999999999999999877621100 0124788999999999999
Q ss_pred C-EEEEEeCCCcEEEEeC-CCcceeeeccC--cCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCC---------CceeEE
Q 010296 233 R-YLASGGLDRHIHLWDT-RIQEHIQAFPG--HRGPVSCLTFRQGTSELFSGSFDRTVKIWNAED---------RAYIST 299 (513)
Q Consensus 233 ~-~l~s~~~dg~i~vwd~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~ 299 (513)
+ +|++|+.+|.|++|++ .+++. ..+.+ |...|.+++|+| +.+|++++.|+.|++||+++ ++++..
T Consensus 69 ~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 146 (342)
T 1yfq_A 69 DLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN 146 (342)
T ss_dssp SEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS
T ss_pred CcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeE
Confidence 9 9999999999999999 77754 67788 999999999999 99999999999999999988 777776
Q ss_pred eecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCC-Cee---eEEecCCCCeeEEEeec-CCe-EEEEeCCCCEEEEecC
Q 010296 300 LFGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPE-ESR---LVFRAPASSLECCCFIS-NDE-FLSGSDDGSIELWSLL 373 (513)
Q Consensus 300 ~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~-~~~---~~~~~~~~~v~~~~~~~-~~~-~~~~~~dg~i~iwd~~ 373 (513)
+. |...|.+++|++++ +++++.++.|++|++.. ... .....+...+.+++|+| ++. +++++.+|.|++|++.
T Consensus 147 ~~-~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 147 TK-VKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD 224 (342)
T ss_dssp SS-SCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECC
T ss_pred Ee-eCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEc
Confidence 66 88999999999888 88999999999999987 432 24556778899999999 774 8899999999999998
Q ss_pred CC------CeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEE
Q 010296 374 RK------KPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVR 447 (513)
Q Consensus 374 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~ 447 (513)
.. ++...+....... ....|...|++++|+|++++|++|+.||.|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 276 (342)
T 1yfq_A 225 DQGDDYNSSKRFAFRCHRLNL----------------------------KDTNLAYPVNSIEFSPRHKFLYTAGSDGIIS 276 (342)
T ss_dssp TTCCSTTCTTCEEEECCCCCT----------------------------TCCSSCCCEEEEEECTTTCCEEEEETTSCEE
T ss_pred CCCcccccccceeeecccccc----------------------------cccccceeEEEEEEcCCCCEEEEecCCceEE
Confidence 86 6666665432210 0023445699999999999999999999999
Q ss_pred EEEeCCCCcceeeeeecCc-ccEEEEEEeecCCCEEEEEecCCCc-ccccc---cCCCcccceEEEe-c
Q 010296 448 LWAIESETKDIQPLYNLPL-VGFVNSLAFAKSGQFLIAGVGQEPR-LGRWG---HLPAARNGVLVHP-I 510 (513)
Q Consensus 448 vwd~~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~l~~~~~~dg~-v~~W~---~~~~~~~~~~~~~-l 510 (513)
+||+.++ ..+..+.. | ..+|++++ |++++|+++ +.||. .+.|. ..+..++.+++++ |
T Consensus 277 vwd~~~~-~~~~~~~~--~h~~~v~~~~--~~~~~l~s~-s~Dg~~~~~~~~~~~~~~~~~~i~~~~~~ 339 (342)
T 1yfq_A 277 CWNLQTR-KKIKNFAK--FNEDSVVKIA--CSDNILCLA-TSDDTFKTNAAIDQTIELNASSIYIIFDY 339 (342)
T ss_dssp EEETTTT-EEEEECCC--CSSSEEEEEE--ECSSEEEEE-EECTHHHHCSSSCTTSCCCCCEEEEEETC
T ss_pred EEcCccH-hHhhhhhc--ccCCCceEec--CCCCeEEEE-ecCCcccccccccccCCCCCceEEEeccc
Confidence 9999987 33333332 5 88999999 999999999 88999 88787 4556667888877 5
No 42
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-39 Score=315.86 Aligned_cols=321 Identities=12% Similarity=0.154 Sum_probs=247.0
Q ss_pred cCCCcccchhhh-hccCCCeEEEEECC-CCCeEEEEeCCceEEEEeCCC---CccccccCCChhhhccCCCCCCCCCCCC
Q 010296 144 QKPEATDEFRVL-LKHRQSVTAVALSE-DDSKGFSASKDGSILHWDVSS---GKGVKYLWPSEEVLKSHGAKDPQGRATK 218 (513)
Q Consensus 144 ~~~~~~~~~~~~-~~h~~~V~~~~~s~-~~~~l~t~~~dg~v~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (513)
|. .....+..+ .+|.+.|++++|+| ++++|++|+.||+|+|||+.+ +...... ....
T Consensus 48 w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-----------------~~~~ 109 (437)
T 3gre_A 48 GN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSS-----------------LTYD 109 (437)
T ss_dssp GG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCS-----------------EEEE
T ss_pred cc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCccccee-----------------eecc
Confidence 44 334556666 89999999999999 999999999999999999876 3211100 1125
Q ss_pred CcccEEEEEEcCCCCEEEEEeCCCcEEEEeCC---CcceeeeccC------------cCCCeEEEE--EecCCCeEEEEe
Q 010296 219 QSKHILALAVSSDGRYLASGGLDRHIHLWDTR---IQEHIQAFPG------------HRGPVSCLT--FRQGTSELFSGS 281 (513)
Q Consensus 219 ~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l~~~~ 281 (513)
|...|++++|+|++.+|++|+.||.|++||+. +++.+..+.. +...+.++. +++++.+|++++
T Consensus 110 h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (437)
T 3gre_A 110 CSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT 189 (437)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe
Confidence 88999999999999999999999999999994 5544433322 455677776 557899999999
Q ss_pred CCCcEEEEeCCCCceeEEeec--ccCCeEEEEeeCCCe-EEEEeCCCcEEEEecCCCeeeEEe--cCCCCeeEEEeec--
Q 010296 282 FDRTVKIWNAEDRAYISTLFG--HQSEVLTIDCLRKER-VLTVGRDRSMQLWKVPEESRLVFR--APASSLECCCFIS-- 354 (513)
Q Consensus 282 ~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~-- 354 (513)
.|+.|++||+++++++..+.. |...|.+++|+|++. +++++.|+.|++||++.+..+... .+...|.+++++|
T Consensus 190 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 269 (437)
T 3gre_A 190 NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFY 269 (437)
T ss_dssp TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTT
T ss_pred CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecccc
Confidence 999999999999999999987 889999999999875 568999999999999998876432 6677899996654
Q ss_pred --CCe-EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEe
Q 010296 355 --NDE-FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVC 431 (513)
Q Consensus 355 --~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 431 (513)
++. +++++.||.|++||+.+++++..+........ ...+.+....+. ...+....|...|++++|+
T Consensus 270 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~----------~~~~~~~~~~~~v~~l~~~ 338 (437)
T 3gre_A 270 GKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPS-MEHFLPIEKGLE----------ELNFCGIRSLNALSTISVS 338 (437)
T ss_dssp CTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCC-GGGGSCBCSSGG----------GCCCCCCCSGGGGCCEEEE
T ss_pred CCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCc-cceecccccccc----------cceecccccCCceEEEEEC
Confidence 564 78999999999999999999888875543221 112222222110 0112223477889999999
Q ss_pred cCCCEEEEecCCCcEEEEEeCCCCcceeeeeec-----------------------------------CcccEEEEEEee
Q 010296 432 GGSDLAASGAGNGSVRLWAIESETKDIQPLYNL-----------------------------------PLVGFVNSLAFA 476 (513)
Q Consensus 432 ~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~-----------------------------------~~~~~v~~v~~s 476 (513)
++++|++|+.||.|++||+.++ .....+... .|...|++++|+
T Consensus 339 -~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~ 416 (437)
T 3gre_A 339 -NDKILLTDEATSSIVMFSLNEL-SSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTC 416 (437)
T ss_dssp -TTEEEEEEGGGTEEEEEETTCG-GGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEE
T ss_pred -CceEEEecCCCCeEEEEECCCc-ccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeee
Confidence 7799999999999999999887 333333221 178889999999
Q ss_pred cC--CCEEEEEecCCCcccccc
Q 010296 477 KS--GQFLIAGVGQEPRLGRWG 496 (513)
Q Consensus 477 p~--~~~l~~~~~~dg~v~~W~ 496 (513)
++ +.+|+++ +.||.|+||.
T Consensus 417 ~~~~~~~l~s~-~~dG~I~iw~ 437 (437)
T 3gre_A 417 EVDETPLLVAC-DNSGLIGIFQ 437 (437)
T ss_dssp ESSSSEEEEEE-ETTSCEEEEC
T ss_pred ccCCceEEEEE-cCCceEEEeC
Confidence 98 6678887 9999999994
No 43
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-40 Score=317.11 Aligned_cols=285 Identities=11% Similarity=0.115 Sum_probs=222.7
Q ss_pred hhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCC--ccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCC
Q 010296 155 LLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSG--KGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDG 232 (513)
Q Consensus 155 ~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 232 (513)
+..|.++|++++|+|++++|++|+.|+.|+||++.++ ..+. .+.+|...|++++|+|++
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~-------------------~~~~h~~~v~~~~~s~~~ 67 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHAR-------------------TFSDHDKIVTCVDWAPKS 67 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECC-------------------CBCCCSSCEEEEEECTTT
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEE-------------------EEecCCceEEEEEEeCCC
Confidence 4457889999999999999999999999999999877 4443 346899999999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCcc---eeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCc---eeEEeec-ccC
Q 010296 233 RYLASGGLDRHIHLWDTRIQE---HIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRA---YISTLFG-HQS 305 (513)
Q Consensus 233 ~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~-~~~ 305 (513)
++|++++.|+.|++||+.++. ....+..|...|.+++|+|++++|++++.|+.|++||+.+++ ....+.. |..
T Consensus 68 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~ 147 (377)
T 3dwl_C 68 NRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS 147 (377)
T ss_dssp CCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS
T ss_pred CEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC
Confidence 999999999999999999877 677788899999999999999999999999999999999887 4677777 999
Q ss_pred CeEEEEeeCCC-eEEEEeCCCcEEEEecCC------------------CeeeEEecCCCCeeEEEeecCCe-EEEEeCCC
Q 010296 306 EVLTIDCLRKE-RVLTVGRDRSMQLWKVPE------------------ESRLVFRAPASSLECCCFISNDE-FLSGSDDG 365 (513)
Q Consensus 306 ~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~------------------~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~dg 365 (513)
.|.+++|+|++ .+++++.|+.|++||+.. +.......|...|.+++|+|++. |++++.||
T Consensus 148 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~ 227 (377)
T 3dwl_C 148 TILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDS 227 (377)
T ss_dssp CEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTT
T ss_pred CeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCC
Confidence 99999999987 566899999999999852 22332227888999999999986 88999999
Q ss_pred CEEEEecCCCCe----eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec
Q 010296 366 SIELWSLLRKKP----VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA 441 (513)
Q Consensus 366 ~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~ 441 (513)
.|++||+.+++. +..+ ..|...|.+++|+|++++|++|+
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~-------------------------------------~~~~~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 228 SVTIAYPSAPEQPPRALITV-------------------------------------KLSQLPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp EEC-CEECSTTSCEEECCCE-------------------------------------ECSSSCEEEEEEEETTEEEEEES
T ss_pred cEEEEECCCCCCcceeeEee-------------------------------------cCCCCceEEEEEcCCCCEEEEEc
Confidence 999999998876 3333 23445599999999999999998
Q ss_pred CCCcEEEEEeCCCCc-cee-------------------------e---------e--------------eecCcccEEEE
Q 010296 442 GNGSVRLWAIESETK-DIQ-------------------------P---------L--------------YNLPLVGFVNS 472 (513)
Q Consensus 442 ~dg~v~vwd~~~~~~-~~~-------------------------~---------~--------------~~~~~~~~v~~ 472 (513)
.++.+ +|+...... ... . + ....|...|++
T Consensus 271 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~ 349 (377)
T 3dwl_C 271 NYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIAT 349 (377)
T ss_dssp SSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEE
T ss_pred CCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEE
Confidence 77655 776652210 000 0 0 00127889999
Q ss_pred EEeecCCC----EEEEEecCCCccccccc
Q 010296 473 LAFAKSGQ----FLIAGVGQEPRLGRWGH 497 (513)
Q Consensus 473 v~~sp~~~----~l~~~~~~dg~v~~W~~ 497 (513)
+++.+... .|+++ |.||.|++|++
T Consensus 350 ~~~~~~~~~~~~~~~s~-g~Dg~i~iWdl 377 (377)
T 3dwl_C 350 LRPYAGTPGNITAFTSS-GTDGRVVLWTL 377 (377)
T ss_dssp EEEEEEETTEEEEEEEE-ETTSEEEEECC
T ss_pred EeccCCCCCceEEEEee-cCCCcEEEecC
Confidence 99776543 57777 99999999985
No 44
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.5e-38 Score=296.05 Aligned_cols=257 Identities=19% Similarity=0.346 Sum_probs=222.3
Q ss_pred ccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE
Q 010296 149 TDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV 228 (513)
Q Consensus 149 ~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 228 (513)
..+++.+.+|...|++++|+|++++|++|+.|++|+|||+.+++.+..+ .+|...|.+++|
T Consensus 55 ~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~-------------------~~h~~~v~~~~~ 115 (319)
T 3frx_A 55 GVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRF-------------------VGHKSDVMSVDI 115 (319)
T ss_dssp EEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-------------------ECCSSCEEEEEE
T ss_pred cccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEE-------------------ccCCCcEEEEEE
Confidence 3456788999999999999999999999999999999999998877654 689999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecC------CCeEEEEeCCCcEEEEeCCCCceeEEeec
Q 010296 229 SSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQG------TSELFSGSFDRTVKIWNAEDRAYISTLFG 302 (513)
Q Consensus 229 s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 302 (513)
+|++.+|++|+.|++|++||+. +..+..+.+|...|.++.|+|. +.+|++++.|+.|++||+.+.+....+.+
T Consensus 116 ~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 194 (319)
T 3frx_A 116 DKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG 194 (319)
T ss_dssp CTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred cCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecC
Confidence 9999999999999999999986 5677888899999999999985 44899999999999999999999999999
Q ss_pred ccCCeEEEEeeCCCe-EEEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEe
Q 010296 303 HQSEVLTIDCLRKER-VLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIV 381 (513)
Q Consensus 303 ~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~ 381 (513)
|...|.+++|+|++. +++++.|+.|++||+.+...+....+...+.+++|+|++.+++++.++.+++|++.....+..+
T Consensus 195 h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~ 274 (319)
T 3frx_A 195 HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDL 274 (319)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEE
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeecc
Confidence 999999999999885 5689999999999999988876666678899999999998666666777999999887766665
Q ss_pred ecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 382 KNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
....... ...+...+.+++|+|+|++|++|+.||.|+||++.+.
T Consensus 275 ~~~~~~~-----------------------------~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 275 RPEFAGY-----------------------------SKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CCCCTTC-----------------------------CGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred Ccccccc-----------------------------ccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 4321100 0233445999999999999999999999999998754
No 45
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-39 Score=314.26 Aligned_cols=288 Identities=15% Similarity=0.249 Sum_probs=239.9
Q ss_pred cCCCeEEEEECCCCC-eEEEE----------eCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEE
Q 010296 158 HRQSVTAVALSEDDS-KGFSA----------SKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILAL 226 (513)
Q Consensus 158 h~~~V~~~~~s~~~~-~l~t~----------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 226 (513)
+...|.+++|+|+++ +|++| +.|+.|+||++.++.....+ ....|...|+++
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~-----------------~~~~~~~~v~~~ 73 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPI-----------------ASLQVDSKFNDL 73 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCS-----------------CCCCCSSCEEEE
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEE-----------------EEEecCCceEEE
Confidence 445799999999987 89999 88999999999887633211 123678899999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCC----cceeeeccCcCCCeEEEEEecC-CCeEEEEeCCCcEEEEeCCCCc------
Q 010296 227 AVSSDGRYLASGGLDRHIHLWDTRI----QEHIQAFPGHRGPVSCLTFRQG-TSELFSGSFDRTVKIWNAEDRA------ 295 (513)
Q Consensus 227 ~~s~~~~~l~s~~~dg~i~vwd~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~------ 295 (513)
+|+|++.+|++|+.||.|++|++.+ .+.+..+.+|...|.+++|+|+ +.+|++++.|+.|++||+.+++
T Consensus 74 ~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 153 (416)
T 2pm9_A 74 DWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY 153 (416)
T ss_dssp EECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC
T ss_pred EECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc
Confidence 9999999999999999999999987 4578889999999999999998 8999999999999999999876
Q ss_pred eeE---EeecccCCeEEEEeeCC-C-eEEEEeCCCcEEEEecCCCeeeE-EecC------CCCeeEEEeecCC--eEEEE
Q 010296 296 YIS---TLFGHQSEVLTIDCLRK-E-RVLTVGRDRSMQLWKVPEESRLV-FRAP------ASSLECCCFISND--EFLSG 361 (513)
Q Consensus 296 ~~~---~~~~~~~~v~~~~~~~~-~-~~~~~~~d~~i~iwd~~~~~~~~-~~~~------~~~v~~~~~~~~~--~~~~~ 361 (513)
... .+..|...|.+++|+|+ + .+++++.++.|++||+.+..... +..+ ...+.+++|+|++ .++++
T Consensus 154 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 233 (416)
T 2pm9_A 154 TPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATA 233 (416)
T ss_dssp CCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEE
T ss_pred cccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEE
Confidence 332 23678899999999997 4 56688999999999999887764 3333 6789999999987 47899
Q ss_pred eCCC---CEEEEecCCC-CeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEec-CCCE
Q 010296 362 SDDG---SIELWSLLRK-KPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCG-GSDL 436 (513)
Q Consensus 362 ~~dg---~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~ 436 (513)
+.++ .|++||++++ .++..+. ..|...|++++|+| ++++
T Consensus 234 ~~d~~~~~i~~~d~~~~~~~~~~~~------------------------------------~~~~~~v~~~~~s~~~~~~ 277 (416)
T 2pm9_A 234 TGSDNDPSILIWDLRNANTPLQTLN------------------------------------QGHQKGILSLDWCHQDEHL 277 (416)
T ss_dssp ECCSSSCCCCEEETTSTTSCSBCCC------------------------------------SCCSSCEEEEEECSSCSSC
T ss_pred ECCCCCceEEEEeCCCCCCCcEEee------------------------------------cCccCceeEEEeCCCCCCe
Confidence 9998 9999999886 3433332 13445599999999 9999
Q ss_pred EEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCC-CEEEEEecCCCcccccccCCCcc
Q 010296 437 AASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSG-QFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 437 l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~-~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
|++++.||.|++||+.++ ..+..+.. |...|++++|+|++ .+|+++ +.|+.|++|++.....
T Consensus 278 l~s~~~dg~v~~wd~~~~-~~~~~~~~--~~~~v~~~~~s~~~~~~l~s~-~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 278 LLSSGRDNTVLLWNPESA-EQLSQFPA--RGNWCFKTKFAPEAPDLFACA-SFDNKIEVQTLQNLTN 340 (416)
T ss_dssp EEEEESSSEEEEECSSSC-CEEEEEEC--SSSCCCCEEECTTCTTEEEEC-CSSSEEEEEESCCCCC
T ss_pred EEEEeCCCCEEEeeCCCC-ccceeecC--CCCceEEEEECCCCCCEEEEE-ecCCcEEEEEccCCCC
Confidence 999999999999999987 44444443 78899999999999 788877 9999999999876543
No 46
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.5e-38 Score=296.58 Aligned_cols=258 Identities=17% Similarity=0.275 Sum_probs=222.6
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCccc
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKH 222 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (513)
+|+.........+..|...|.+++|+|++.+|++|+.|+.+++|++......... .....+..|...
T Consensus 90 vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~-------------~~~~~~~~h~~~ 156 (354)
T 2pbi_B 90 VWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMA-------------AKKKSVAMHTNY 156 (354)
T ss_dssp EEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSG-------------GGCEEEEECSSC
T ss_pred EEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccccccc-------------ccceeeeccCCc
Confidence 5666666777788889999999999999999999999999999998754321100 011123578999
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEec--CCCeEEEEeCCCcEEEEeCCCCceeEEe
Q 010296 223 ILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQ--GTSELFSGSFDRTVKIWNAEDRAYISTL 300 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 300 (513)
|.+++|+|++..|++++.|++|++||+.+++++..+.+|...|.+++|+| ++++|++|+.||.|++||+++++++..+
T Consensus 157 v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~ 236 (354)
T 2pbi_B 157 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF 236 (354)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 99999999999999999999999999999999999999999999999987 4689999999999999999999999999
Q ss_pred ecccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeeeEEecC---CCCeeEEEeecCCe-EEEEeCCCCEEEEecCCC
Q 010296 301 FGHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRLVFRAP---ASSLECCCFISNDE-FLSGSDDGSIELWSLLRK 375 (513)
Q Consensus 301 ~~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~ 375 (513)
.+|...|.+++|+|++ .+++++.|++|++||++.......... ...+.+++|+|++. +++|+.|+.|++||+.++
T Consensus 237 ~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~ 316 (354)
T 2pbi_B 237 ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKG 316 (354)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCC
Confidence 9999999999999987 566999999999999998876643332 34688999999986 779999999999999999
Q ss_pred CeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEE
Q 010296 376 KPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWA 450 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd 450 (513)
+.+..+. .|...|++++|+|+|++|++|+.||+|+||+
T Consensus 317 ~~~~~l~-------------------------------------~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 317 SRVSILF-------------------------------------GHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SEEEEEC-------------------------------------CCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ceEEEEE-------------------------------------CCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 8887763 3445599999999999999999999999995
No 47
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=8.3e-38 Score=303.03 Aligned_cols=277 Identities=20% Similarity=0.322 Sum_probs=236.4
Q ss_pred CeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeC
Q 010296 161 SVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGL 240 (513)
Q Consensus 161 ~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 240 (513)
.++.|+||++ ++||+|. |++|+|||+.+++....+ ...+|...|++|+|+|+|++|++|+.
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~-----------------~~~~~~~~V~sv~fspdg~~lasgs~ 167 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLL-----------------QMEQPGEYISSVAWIKEGNYLAVGTS 167 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEE-----------------ECCSTTCCEEEEEECTTSSEEEEEET
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEE-----------------EecCCCCcEEEEEECCCCCEEEEEEC
Confidence 4678999986 5777765 899999999999877654 34578889999999999999999999
Q ss_pred CCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCC-ceeEEeecccCCeEEEEeeCCC-eE
Q 010296 241 DRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDR-AYISTLFGHQSEVLTIDCLRKE-RV 318 (513)
Q Consensus 241 dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~ 318 (513)
||.|+|||+.+++.+..+.+|...+.+++++ +.+|++|+.|+.+++|+.... ..+..+.+|...+..+.++|++ .+
T Consensus 168 Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l 245 (420)
T 4gga_A 168 SAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHL 245 (420)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred CCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCee
Confidence 9999999999999999999999999998875 578999999999999999874 4567788999999999999987 45
Q ss_pred EEEeCCCcEEEEecCCCee-----eEEecCCCCeeEEEeecCCe--EEE--EeCCCCEEEEecCCCCeeEEeecCCCccc
Q 010296 319 LTVGRDRSMQLWKVPEESR-----LVFRAPASSLECCCFISNDE--FLS--GSDDGSIELWSLLRKKPVYIVKNAHPLLD 389 (513)
Q Consensus 319 ~~~~~d~~i~iwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~--~~~--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 389 (513)
++++.|+.+++|+...+.. .....+...|.+++|+|.+. +++ |+.|++|++||+.+++++..+.....
T Consensus 246 ~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~--- 322 (420)
T 4gga_A 246 ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ--- 322 (420)
T ss_dssp EEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC---
T ss_pred eeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc---
Confidence 5899999999999976542 35667888999999999763 443 45799999999999998888764332
Q ss_pred CCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec--CCCcEEEEEeCCCCcceeeeeecCcc
Q 010296 390 GLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA--GNGSVRLWAIESETKDIQPLYNLPLV 467 (513)
Q Consensus 390 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~--~dg~v~vwd~~~~~~~~~~~~~~~~~ 467 (513)
+.++.|+|+++.|++++ .||.|+|||+.++ ..+..+.. |.
T Consensus 323 -----------------------------------v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~-~~v~~l~g--H~ 364 (420)
T 4gga_A 323 -----------------------------------VCSILWSPHYKELISGHGFAQNQLVIWKYPTM-AKVAELKG--HT 364 (420)
T ss_dssp -----------------------------------EEEEEEETTTTEEEEEECTTTCCEEEEETTTC-CEEEEECC--CS
T ss_pred -----------------------------------eeeeeecCCCCeEEEEEecCCCEEEEEECCCC-cEEEEEcC--CC
Confidence 89999999999888765 7899999999987 44555544 88
Q ss_pred cEEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 468 GFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 468 ~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
+.|++|+|+|+|++|+++ +.|++|+||++...
T Consensus 365 ~~V~~l~~spdg~~l~S~-s~D~tvriWdv~~~ 396 (420)
T 4gga_A 365 SRVLSLTMSPDGATVASA-AADETLRLWRCFEL 396 (420)
T ss_dssp SCEEEEEECTTSSCEEEE-ETTTEEEEECCSCS
T ss_pred CCEEEEEEcCCCCEEEEE-ecCCeEEEEECCCC
Confidence 999999999999999999 89999999998653
No 48
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.8e-38 Score=289.16 Aligned_cols=249 Identities=15% Similarity=0.194 Sum_probs=207.5
Q ss_pred hhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCC--ccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC
Q 010296 153 RVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSG--KGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS 230 (513)
Q Consensus 153 ~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 230 (513)
..+.+|.+.|++++|+|+|++||+|+.|++|+||++... ..+. .+.+|...|++++|+|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~-------------------~l~gH~~~V~~v~~s~ 63 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLID-------------------TLTGHEGPVWRVDWAH 63 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCE-------------------EECCCSSCEEEEEECC
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEE-------------------EEccccCCeEEEEecC
Confidence 356789999999999999999999999999999999753 2232 2468999999999986
Q ss_pred C--CCEEEEEeCCCcEEEEeCCCcc--eeeeccCcCCCeEEEEEecC--CCeEEEEeCCCcEEEEeCCCCce--eEEeec
Q 010296 231 D--GRYLASGGLDRHIHLWDTRIQE--HIQAFPGHRGPVSCLTFRQG--TSELFSGSFDRTVKIWNAEDRAY--ISTLFG 302 (513)
Q Consensus 231 ~--~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~ 302 (513)
+ +++|++|+.|++|+|||+.+++ .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||++++.. ...+.+
T Consensus 64 ~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~ 143 (297)
T 2pm7_B 64 PKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDA 143 (297)
T ss_dssp GGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEEC
T ss_pred CCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeec
Confidence 4 8999999999999999998874 56677889999999999997 88999999999999999987632 456778
Q ss_pred ccCCeEEEEeeCC--------------CeEEEEeCCCcEEEEecCCCe----e-eEEecCCCCeeEEEeecCC----eEE
Q 010296 303 HQSEVLTIDCLRK--------------ERVLTVGRDRSMQLWKVPEES----R-LVFRAPASSLECCCFISND----EFL 359 (513)
Q Consensus 303 ~~~~v~~~~~~~~--------------~~~~~~~~d~~i~iwd~~~~~----~-~~~~~~~~~v~~~~~~~~~----~~~ 359 (513)
|...|.+++|+|+ ..|++++.|+.|++||+.+.. . ..+..|...|.+++|+|++ .|+
T Consensus 144 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~la 223 (297)
T 2pm7_B 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMA 223 (297)
T ss_dssp CSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEE
T ss_pred ccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEE
Confidence 9999999999996 267799999999999998654 2 2567899999999999984 488
Q ss_pred EEeCCCCEEEEecCCCCe--eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEE
Q 010296 360 SGSDDGSIELWSLLRKKP--VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLA 437 (513)
Q Consensus 360 ~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 437 (513)
+++.|++|+|||+.+... ...... ...+...|.+++|+|++++|
T Consensus 224 s~s~D~~v~iWd~~~~~~~~~~~~~~----------------------------------~~~~~~~v~~~~~s~~g~~l 269 (297)
T 2pm7_B 224 SVSQDRTCIIWTQDNEQGPWKKTLLK----------------------------------EEKFPDVLWRASWSLSGNVL 269 (297)
T ss_dssp EEETTSCEEEEEESSTTSCCEEEESS----------------------------------SSCCSSCEEEEEECSSSCCE
T ss_pred EEECCCcEEEEEeCCCCCccceeeee----------------------------------cccCCCcEEEEEECCCCCEE
Confidence 999999999999876431 111110 02234459999999999999
Q ss_pred EEecCCCcEEEEEeCCC
Q 010296 438 ASGAGNGSVRLWAIESE 454 (513)
Q Consensus 438 ~~g~~dg~v~vwd~~~~ 454 (513)
++++.||.|+||+....
T Consensus 270 as~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 270 ALSGGDNKVTLWKENLE 286 (297)
T ss_dssp EEEETTSCEEEEEECTT
T ss_pred EEEcCCCcEEEEEECCC
Confidence 99999999999998744
No 49
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=303.91 Aligned_cols=317 Identities=16% Similarity=0.222 Sum_probs=247.3
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECC-CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcc
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSE-DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSK 221 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (513)
+|..........+.+|.+.|++++|+| ++++|++|+.||.|++|++.++.....+...... ........+|..
T Consensus 27 v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 100 (408)
T 4a11_B 27 VLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVC------SIGRDHPDVHRY 100 (408)
T ss_dssp HHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEE------EECTTCTTCCSS
T ss_pred eeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccc------cccccccccCCC
Confidence 344444556667888999999999999 9999999999999999999988765543100000 000112246899
Q ss_pred cEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCC---CeEEEEeCCCcEEEEeCCCCcee
Q 010296 222 HILALAVSS-DGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGT---SELFSGSFDRTVKIWNAEDRAYI 297 (513)
Q Consensus 222 ~v~~~~~s~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~ 297 (513)
.|++++|+| ++.+|++++.||.|++||+.+++.+..+. +...+.++.|+|.+ .++++++.++.|++||+.+++.+
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS 179 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee
Confidence 999999999 78899999999999999999999888877 78899999999854 48999999999999999999999
Q ss_pred EEeecccCCeEEEEeeCCCe--EEEEeCCCcEEEEecCCCeee--EE---------------ecCCCCeeEEEeecCCe-
Q 010296 298 STLFGHQSEVLTIDCLRKER--VLTVGRDRSMQLWKVPEESRL--VF---------------RAPASSLECCCFISNDE- 357 (513)
Q Consensus 298 ~~~~~~~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~~~~--~~---------------~~~~~~v~~~~~~~~~~- 357 (513)
..+..|...|.+++|+|++. +++++.|+.|++||++..... .+ ..|...|.+++|+|++.
T Consensus 180 ~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 259 (408)
T 4a11_B 180 HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLH 259 (408)
T ss_dssp EEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSE
T ss_pred eeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCE
Confidence 99999999999999999874 669999999999999876422 11 45778899999999985
Q ss_pred EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEE
Q 010296 358 FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLA 437 (513)
Q Consensus 358 ~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 437 (513)
|++++.||.|++||+.+++....+...... .....+........+..+
T Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~ 307 (408)
T 4a11_B 260 LLTVGTDNRMRLWNSSNGENTLVNYGKVCN--------------------------------NSKKGLKFTVSCGCSSEF 307 (408)
T ss_dssp EEEEETTSCEEEEETTTCCBCCCCCCCCCC--------------------------------CCSSCCCCEECCSSSSCE
T ss_pred EEEecCCCeEEEEECCCCccceeccccccc--------------------------------cccccceeEEecCCCceE
Confidence 889999999999999998765443321110 000012222223344567
Q ss_pred EEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 438 ASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 438 ~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
++++.++.|++||+.++ ..+..+.. |.+.|++++|+|++++|+++ +.||.|++|++.....
T Consensus 308 ~~~~~~~~i~v~d~~~~-~~~~~~~~--~~~~v~~~~~s~~~~~l~s~-~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 308 VFVPYGSTIAVYTVYSG-EQITMLKG--HYKTVDCCVFQSNFQELYSG-SRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEEEETTEEEEEETTTC-CEEEEECC--CSSCEEEEEEETTTTEEEEE-ETTSCEEEEEECC---
T ss_pred EEEecCCEEEEEECcCC-cceeeecc--CCCeEEEEEEcCCCCEEEEE-CCCCeEEEEeCCCCCc
Confidence 77788999999999987 44444433 78899999999999999999 8999999999877643
No 50
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=296.59 Aligned_cols=317 Identities=14% Similarity=0.254 Sum_probs=246.4
Q ss_pred cCCCcccchhhhhccCCCeEEEEECCC---CCeEEEEeCCceEEEEeCCC-CccccccCCChhhhccCCCCCCCCCCCCC
Q 010296 144 QKPEATDEFRVLLKHRQSVTAVALSED---DSKGFSASKDGSILHWDVSS-GKGVKYLWPSEEVLKSHGAKDPQGRATKQ 219 (513)
Q Consensus 144 ~~~~~~~~~~~~~~h~~~V~~~~~s~~---~~~l~t~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (513)
+...+...+..+.+|.+.|++|+|+|+ |++|++|+.||.|+||++.+ +..+.. .+.+|
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~------------------~~~~h 85 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPK------------------AQQMH 85 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEE------------------EEEEC
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEE------------------Eeccc
Confidence 445566777889999999999999999 69999999999999999987 433311 23578
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEE--ecCCCeEEEEeCCCcEEEEeCCCCcee
Q 010296 220 SKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTF--RQGTSELFSGSFDRTVKIWNAEDRAYI 297 (513)
Q Consensus 220 ~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~ 297 (513)
...|++++|+|++++|++++.||.|++||+.+++.+. +..|...|.+++| +|++.+|++++.||.|++||+++++.+
T Consensus 86 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 164 (368)
T 3mmy_A 86 TGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPM 164 (368)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCS
T ss_pred cCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEE
Confidence 9999999999999999999999999999999988776 4559999999999 889999999999999999999999988
Q ss_pred EEeecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeeeEE---ecCCCCeeEEEeecCCe-----EEEEeCCCCEEE
Q 010296 298 STLFGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRLVF---RAPASSLECCCFISNDE-----FLSGSDDGSIEL 369 (513)
Q Consensus 298 ~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~---~~~~~~v~~~~~~~~~~-----~~~~~~dg~i~i 369 (513)
..+..+ ..+.++.+.++ .+++++.++.+++|++........ ......+.++.+.+... +++++.+|.|++
T Consensus 165 ~~~~~~-~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i 242 (368)
T 3mmy_A 165 MVLQLP-ERCYCADVIYP-MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAI 242 (368)
T ss_dssp EEEECS-SCEEEEEEETT-EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEE
T ss_pred EEEecC-CCceEEEecCC-eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEE
Confidence 888755 46777777644 677888999999999987654422 22334556666655432 889999999999
Q ss_pred EecCCC---CeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcE
Q 010296 370 WSLLRK---KPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSV 446 (513)
Q Consensus 370 wd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v 446 (513)
|++... ..+..+........ ......+...|++++|+|++++|++|+.||.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i 297 (368)
T 3mmy_A 243 HYINPPNPAKDNFTFKCHRSNGT-------------------------NTSAPQDIYAVNGIAFHPVHGTLATVGSDGRF 297 (368)
T ss_dssp EESSCSCHHHHSEEEECSEEC-----------------------------CCCEEECCEEEEEECTTTCCEEEEETTSCE
T ss_pred EecCCCCccccceeeeeeecccc-------------------------cccccccccceEEEEEecCCCEEEEEccCCeE
Confidence 999887 44555543221100 00002233459999999999999999999999
Q ss_pred EEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCC-cccceEEEec
Q 010296 447 RLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA-ARNGVLVHPI 510 (513)
Q Consensus 447 ~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~-~~~~~~~~~l 510 (513)
+|||+.++ ..+..+. .|..+|++++|+|+|++|+++ +.|+..+.|+.... .+..++++++
T Consensus 298 ~iwd~~~~-~~~~~~~--~~~~~v~~~~~s~~g~~l~~~-s~d~~~~~~~~~~~~~~~~i~~~~~ 358 (368)
T 3mmy_A 298 SFWDKDAR-TKLKTSE--QLDQPISACCFNHNGNIFAYA-SSYDWSKGHEFYNPQKKNYIFLRNA 358 (368)
T ss_dssp EEEETTTT-EEEEECC--CCSSCEEEEEECTTSSCEEEE-ECCCSTTCGGGCCTTSCCEEEEECC
T ss_pred EEEECCCC-cEEEEec--CCCCCceEEEECCCCCeEEEE-ecccccccccccCCCccceeeehhc
Confidence 99999987 4444443 378899999999999999999 66666666654432 3345566554
No 51
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.3e-38 Score=297.53 Aligned_cols=248 Identities=15% Similarity=0.200 Sum_probs=204.1
Q ss_pred hhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCC
Q 010296 154 VLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGR 233 (513)
Q Consensus 154 ~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 233 (513)
...+|...|++++|+|++. +++++.||+|+|||+.+++..... .....+|...|++++|+|+++
T Consensus 89 ~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~---------------~~~~~~h~~~V~~v~~spdg~ 152 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVN---------------KFAKYEHDDIVKTLSVFSDGT 152 (357)
T ss_dssp EEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCC---------------CEEECCCSSCEEEEEECSSSS
T ss_pred ccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEE---------------eeccCCCCCCEEEEEECCCCC
Confidence 3457999999999999976 556788999999999887654321 012347899999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCC-eEEEEeCCCcEEEEeCCCCceeEEe--ecccCCeEEE
Q 010296 234 YLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTS-ELFSGSFDRTVKIWNAEDRAYISTL--FGHQSEVLTI 310 (513)
Q Consensus 234 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~ 310 (513)
+|++|+.|+.|++||+.+++++..+.+|...|++++|+|++. ++++++.|+.|++||+++++++..+ ..+...+.++
T Consensus 153 ~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v 232 (357)
T 4g56_B 153 QAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSV 232 (357)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccch
Confidence 999999999999999999999999999999999999999875 7889999999999999998876654 3467789999
Q ss_pred EeeCCC--eEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCC-e-EEEEeCCCCEEEEecCCCCeeEEeecCC
Q 010296 311 DCLRKE--RVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISND-E-FLSGSDDGSIELWSLLRKKPVYIVKNAH 385 (513)
Q Consensus 311 ~~~~~~--~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~-~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~ 385 (513)
+|+|++ .+++++.|+.|++||++++... .+..+...|.+++|+|++ . |++|+.|++|+|||+.+++++..+
T Consensus 233 ~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~---- 308 (357)
T 4g56_B 233 TWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL---- 308 (357)
T ss_dssp EECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC----
T ss_pred hhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC----
Confidence 999964 4568889999999999987765 667788999999999987 3 779999999999999998876553
Q ss_pred CcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEec-CCCEEEEecCCCcEEEEEeCCCC
Q 010296 386 PLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCG-GSDLAASGAGNGSVRLWAIESET 455 (513)
Q Consensus 386 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~g~~dg~v~vwd~~~~~ 455 (513)
.|...|++|+|+| ++.+|++|+.||+|++|++.+..
T Consensus 309 ----------------------------------~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 309 ----------------------------------SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp ----------------------------------CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred ----------------------------------CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 2334499999998 79999999999999999997753
No 52
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-38 Score=293.23 Aligned_cols=249 Identities=21% Similarity=0.327 Sum_probs=195.5
Q ss_pred ccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEE
Q 010296 157 KHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLA 236 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 236 (513)
+|.+.|++++|+|++++|++|+.|++|+||++........ .......+.+|...|++++|+|++++|+
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~------------~~~~~~~~~~h~~~V~~v~~sp~g~~la 123 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTF------------EMDLLAIIEGHENEVKGVAWSNDGYYLA 123 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------C------------CCEEEEEEC----CEEEEEECTTSCEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccc------------cceeEEEEcCCCCcEEEEEECCCCCEEE
Confidence 3999999999999999999999999999999864321000 0000112468999999999999999999
Q ss_pred EEeCCCcEEEEeCCC----cceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCC--ceeEEeecccCCeEEE
Q 010296 237 SGGLDRHIHLWDTRI----QEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDR--AYISTLFGHQSEVLTI 310 (513)
Q Consensus 237 s~~~dg~i~vwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~ 310 (513)
+|+.|++|++||+.. .+++..+.+|...|.+++|+|++.+|++++.|++|++|++.++ +++..+.+|...|.++
T Consensus 124 s~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~ 203 (330)
T 2hes_X 124 TCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSS 203 (330)
T ss_dssp EEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred EEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEE
Confidence 999999999999943 2467788899999999999999999999999999999998776 6788899999999999
Q ss_pred EeeCC--C-eEEEEeCCCcEEEEecCCC--------eee-EEec-CCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCe
Q 010296 311 DCLRK--E-RVLTVGRDRSMQLWKVPEE--------SRL-VFRA-PASSLECCCFISNDEFLSGSDDGSIELWSLLRKKP 377 (513)
Q Consensus 311 ~~~~~--~-~~~~~~~d~~i~iwd~~~~--------~~~-~~~~-~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~ 377 (513)
+|+|+ + .+++++.|++|++|++... ... .+.. |...|.+++|++++.|++++.||.|+||+..++..
T Consensus 204 ~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~ 283 (330)
T 2hes_X 204 DFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEW 283 (330)
T ss_dssp EECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEE
T ss_pred EecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCce
Confidence 99997 4 5779999999999998654 122 2223 77899999999988899999999999999877642
Q ss_pred --eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcc-eEEEEEEec--CCCEEEEecCCCcEEEEEeC
Q 010296 378 --VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYS-WVSSVTVCG--GSDLAASGAGNGSVRLWAIE 452 (513)
Q Consensus 378 --~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~s~--~~~~l~~g~~dg~v~vwd~~ 452 (513)
+.... ..|.. .|.+++|+| ++++|++|+.||+|+||++.
T Consensus 284 ~~~~~~~------------------------------------~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 284 KVFAKRA------------------------------------LCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEEEEES------------------------------------CTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEEeccc------------------------------------cccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 22221 12222 499999999 78999999999999999986
Q ss_pred C
Q 010296 453 S 453 (513)
Q Consensus 453 ~ 453 (513)
.
T Consensus 328 ~ 328 (330)
T 2hes_X 328 K 328 (330)
T ss_dssp -
T ss_pred c
Confidence 4
No 53
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.7e-37 Score=286.08 Aligned_cols=247 Identities=18% Similarity=0.321 Sum_probs=207.7
Q ss_pred CCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCC--cceeeeccCcCCCeEEEEEecC--CCeEEEEeCCCcEEEEeC
Q 010296 216 ATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRI--QEHIQAFPGHRGPVSCLTFRQG--TSELFSGSFDRTVKIWNA 291 (513)
Q Consensus 216 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~ 291 (513)
+.+|...|++++|+|+|++||+|+.|++|+||++.. .+.+..+.+|...|++++|+++ +++|++|+.|++|++||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 468999999999999999999999999999999974 4678889999999999999863 889999999999999999
Q ss_pred CCCc--eeEEeecccCCeEEEEeeCC--C-eEEEEeCCCcEEEEecCCCe---eeEEecCCCCeeEEEeecCC-------
Q 010296 292 EDRA--YISTLFGHQSEVLTIDCLRK--E-RVLTVGRDRSMQLWKVPEES---RLVFRAPASSLECCCFISND------- 356 (513)
Q Consensus 292 ~~~~--~~~~~~~~~~~v~~~~~~~~--~-~~~~~~~d~~i~iwd~~~~~---~~~~~~~~~~v~~~~~~~~~------- 356 (513)
.+++ .+..+.+|...|.+++|+|+ + .+++++.|+.|++|+++... ...+..|...+.+++|+|++
T Consensus 85 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~ 164 (297)
T 2pm7_B 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (297)
T ss_dssp SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-------
T ss_pred CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccC
Confidence 8874 56667789999999999996 4 67799999999999998653 34677888999999999962
Q ss_pred -------eEEEEeCCCCEEEEecCCCCe----eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceE
Q 010296 357 -------EFLSGSDDGSIELWSLLRKKP----VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWV 425 (513)
Q Consensus 357 -------~~~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i 425 (513)
.|++|+.|++|+|||+.++.. ...+ ..|..+|
T Consensus 165 ~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l-------------------------------------~~H~~~V 207 (297)
T 2pm7_B 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-------------------------------------EGHSDWV 207 (297)
T ss_dssp -----CCEEEEEETTSCEEEEEEETTTTEEEEEEEE-------------------------------------CCCSSCE
T ss_pred CCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe-------------------------------------cCCCCce
Confidence 588999999999999987662 2333 3455669
Q ss_pred EEEEEecCC---CEEEEecCCCcEEEEEeCCCCcce--eeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 426 SSVTVCGGS---DLAASGAGNGSVRLWAIESETKDI--QPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 426 ~~~~~s~~~---~~l~~g~~dg~v~vwd~~~~~~~~--~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
.+++|+|++ .+|++++.|++|+||++....... ..+....|...|.+++|+|+|++|+++ +.|+.|++|+....
T Consensus 208 ~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~-~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 208 RDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS-GGDNKVTLWKENLE 286 (297)
T ss_dssp EEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEE-ETTSCEEEEEECTT
T ss_pred EEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEE-cCCCcEEEEEECCC
Confidence 999999984 899999999999999998752211 122213467889999999999999999 89999999987643
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=7.2e-38 Score=294.32 Aligned_cols=283 Identities=13% Similarity=0.237 Sum_probs=238.5
Q ss_pred cCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEE
Q 010296 158 HRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLAS 237 (513)
Q Consensus 158 h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 237 (513)
|.++|.+++|+|+|++++++..++.+.+|.......... ..+|...|++++|+|++++|++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~h~~~v~~~~~~~~~~~l~~ 68 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQIN-------------------TLNHGEVVCAVTISNPTRHVYT 68 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEE-------------------EECCSSCCCEEEECSSSSEEEE
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccce-------------------eccCCCceEEEEEecCCcEEEE
Confidence 567899999999999999888777776665443322221 2478999999999999999999
Q ss_pred EeCCCcEEEEeCCCcceeeec---c--CcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCc--eeEEeecccCCeEEE
Q 010296 238 GGLDRHIHLWDTRIQEHIQAF---P--GHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRA--YISTLFGHQSEVLTI 310 (513)
Q Consensus 238 ~~~dg~i~vwd~~~~~~~~~~---~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~ 310 (513)
++ +|.|++|++.++.....+ . .|...|.+++|+|++++|++++.|+.|++||+.+++ ....+..|...+.++
T Consensus 69 ~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~ 147 (337)
T 1gxr_A 69 GG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYAL 147 (337)
T ss_dssp EC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEE
T ss_pred cC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEE
Confidence 99 999999999877643333 2 688999999999999999999999999999999887 566778899999999
Q ss_pred EeeCCC-eEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEeecCCCc
Q 010296 311 DCLRKE-RVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVKNAHPL 387 (513)
Q Consensus 311 ~~~~~~-~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 387 (513)
+|+|++ .+++++.++.|++||+.+.... .+..|...+.+++|+|++. +++++.||.|++||+.+++.+..+...
T Consensus 148 ~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--- 224 (337)
T 1gxr_A 148 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT--- 224 (337)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS---
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC---
Confidence 999987 5668889999999999988766 5566888999999999985 789999999999999999887776432
Q ss_pred ccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcc
Q 010296 388 LDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLV 467 (513)
Q Consensus 388 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~ 467 (513)
..+.+++|+|++++|++++.+|.|++|++.+.. ......|.
T Consensus 225 -----------------------------------~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~----~~~~~~~~ 265 (337)
T 1gxr_A 225 -----------------------------------SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD----KYQLHLHE 265 (337)
T ss_dssp -----------------------------------SCEEEEEECTTSSEEEEEETTSCEEEEETTSSC----EEEECCCS
T ss_pred -----------------------------------CceEEEEECCCCCEEEEEcCCCcEEEEECCCCC----eEEEcCCc
Confidence 229999999999999999999999999998872 22333478
Q ss_pred cEEEEEEeecCCCEEEEEecCCCcccccccCCCccc
Q 010296 468 GFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAARN 503 (513)
Q Consensus 468 ~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~~ 503 (513)
..|.+++|+|++++|+++ +.||.|++|+...+...
T Consensus 266 ~~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 266 SCVLSLKFAYCGKWFVST-GKDNLLNAWRTPYGASI 300 (337)
T ss_dssp SCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEE
T ss_pred cceeEEEECCCCCEEEEe-cCCCcEEEEECCCCeEE
Confidence 899999999999999998 88999999998876543
No 55
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7.7e-38 Score=329.63 Aligned_cols=290 Identities=17% Similarity=0.254 Sum_probs=249.7
Q ss_pred chhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC
Q 010296 151 EFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS 230 (513)
Q Consensus 151 ~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 230 (513)
..+.+.+|.+.|++++|+|++++|++|+.||.|+|||+.++..+..+ ..|..+|++++|+|
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~-------------------~~~~~~v~~~~~s~ 65 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSI-------------------QVTETPVRAGKFIA 65 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE-------------------ECCSSCEEEEEEEG
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEE-------------------ecCCCcEEEEEEeC
Confidence 44677899999999999999999999999999999999998877654 57899999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCC-ceeEEeecccCCeEE
Q 010296 231 DGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDR-AYISTLFGHQSEVLT 309 (513)
Q Consensus 231 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~ 309 (513)
++++|++|+.||.|++|++.+++.+..+.+|...|++++|+|++++|++++.||.|++|++.++ .....+.+|...|.+
T Consensus 66 ~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~ 145 (814)
T 3mkq_A 66 RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMC 145 (814)
T ss_dssp GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999887 667788889999999
Q ss_pred EEeeC-CC-eEEEEeCCCcEEEEecCCCeee-EEe-cCCCCeeEEEeec--CCe-EEEEeCCCCEEEEecCCCCeeEEee
Q 010296 310 IDCLR-KE-RVLTVGRDRSMQLWKVPEESRL-VFR-APASSLECCCFIS--NDE-FLSGSDDGSIELWSLLRKKPVYIVK 382 (513)
Q Consensus 310 ~~~~~-~~-~~~~~~~d~~i~iwd~~~~~~~-~~~-~~~~~v~~~~~~~--~~~-~~~~~~dg~i~iwd~~~~~~~~~~~ 382 (513)
++|+| ++ .+++++.|+.|++|++.+.... ... .+...+.+++|+| ++. +++++.+|.|++||+.+++++..+.
T Consensus 146 ~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 225 (814)
T 3mkq_A 146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE 225 (814)
T ss_dssp EEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc
Confidence 99999 65 5668999999999999776554 333 3448899999998 664 8899999999999999998888775
Q ss_pred cCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeee
Q 010296 383 NAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLY 462 (513)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~ 462 (513)
. |...|++++|+|++++|++++.||.|++||+.++ .....+.
T Consensus 226 ~-------------------------------------~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~ 267 (814)
T 3mkq_A 226 G-------------------------------------HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY-KVEKTLN 267 (814)
T ss_dssp C-------------------------------------CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC-SEEEEEC
T ss_pred C-------------------------------------CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-cEEEEee
Confidence 3 2234999999999999999999999999999887 3333333
Q ss_pred ecCcccEEEEEEeecCCCEE-EEEecCCCcccccccCCC
Q 010296 463 NLPLVGFVNSLAFAKSGQFL-IAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 463 ~~~~~~~v~~v~~sp~~~~l-~~~~~~dg~v~~W~~~~~ 500 (513)
. +...|.+++|+|++..+ +++ +.++.+.+|+....
T Consensus 268 ~--~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 268 V--GLERSWCIATHPTGRKNYIAS-GFDNGFTVLSLGND 303 (814)
T ss_dssp C--SSSSEEEEEECTTCGGGEEEE-EETTEEEEEECSCC
T ss_pred c--CCCcEEEEEEccCCCceEEEE-EeCCCEEEEEcCCC
Confidence 3 66789999999999843 333 45667888887554
No 56
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=9.6e-39 Score=302.78 Aligned_cols=296 Identities=9% Similarity=0.037 Sum_probs=219.8
Q ss_pred CCCeEEEEECCCCCeEEEEeCC-------ceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC
Q 010296 159 RQSVTAVALSEDDSKGFSASKD-------GSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD 231 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 231 (513)
.-||+|++|+|++++|++||.+ +.|++|++......... .+... ....+.+|...|.+++++
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~-----~~~~~----~~~~l~~~~~~v~s~~~~-- 82 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKE-----QFHIL----SEFALEDNDDSPTAIDAS-- 82 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHH-----HEEEE----EEEECCTTSCCCCEEEEE--
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceee-----eeeee----eEEEccCCCCceEEEEeC--
Confidence 4589999999999999999754 35999998866533210 00000 001235677788888775
Q ss_pred CCEEEEEe-----------CCCcEEEEeCCCccee----ee-----ccCcCCCeEEEEEecCCCeEEEE--eCCCcEEEE
Q 010296 232 GRYLASGG-----------LDRHIHLWDTRIQEHI----QA-----FPGHRGPVSCLTFRQGTSELFSG--SFDRTVKIW 289 (513)
Q Consensus 232 ~~~l~s~~-----------~dg~i~vwd~~~~~~~----~~-----~~~~~~~v~~~~~~~~~~~l~~~--~~dg~i~iw 289 (513)
+..+++|. .++.+++|++...... .. ...+...+.+++|+|+|++|+++ +.|++|+||
T Consensus 83 ~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iw 162 (365)
T 4h5i_A 83 KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRII 162 (365)
T ss_dssp TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEE
T ss_pred CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEe
Confidence 55666654 4678999987654321 11 12345568999999999998754 478999999
Q ss_pred eCCCCceeEEeecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeeeE---EecCCCCeeEEEeecCCe-EEEEeCCC
Q 010296 290 NAEDRAYISTLFGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRLV---FRAPASSLECCCFISNDE-FLSGSDDG 365 (513)
Q Consensus 290 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~---~~~~~~~v~~~~~~~~~~-~~~~~~dg 365 (513)
|+.+++++..+. |...|.+++|+|++.+++.+.++.+++|+..++.... ...|...+.+++|+|++. +++++.++
T Consensus 163 d~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~ 241 (365)
T 4h5i_A 163 DPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKK 241 (365)
T ss_dssp ETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESS
T ss_pred ECCCCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCC
Confidence 999999988876 7788999999999988877777788888887766542 345667899999999997 66777776
Q ss_pred ----CEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec
Q 010296 366 ----SIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA 441 (513)
Q Consensus 366 ----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~ 441 (513)
.+++|++............ ...|...|++++|+|+|++||+|+
T Consensus 242 ~~~~~i~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~V~~~~~Spdg~~lasgs 288 (365)
T 4h5i_A 242 GKGIVLTKISIKSGNTSVLRSKQ---------------------------------VTNRFKGITSMDVDMKGELAVLAS 288 (365)
T ss_dssp SCCEEEEEEEEETTEEEEEEEEE---------------------------------EESSCSCEEEEEECTTSCEEEEEE
T ss_pred cceeEEeecccccceecceeeee---------------------------------ecCCCCCeEeEEECCCCCceEEEc
Confidence 5788888766432211100 033445599999999999999999
Q ss_pred CCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 442 GNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 442 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
.|++|+|||+.++ +.+..+. ..|..+|++|+|||||++||++ +.|++|+||++..+..
T Consensus 289 ~D~~V~iwd~~~~-~~~~~~~-~gH~~~V~~v~fSpdg~~laS~-S~D~tvrvw~ip~~~~ 346 (365)
T 4h5i_A 289 NDNSIALVKLKDL-SMSKIFK-QAHSFAITEVTISPDSTYVASV-SAANTIHIIKLPLNYA 346 (365)
T ss_dssp TTSCEEEEETTTT-EEEEEET-TSSSSCEEEEEECTTSCEEEEE-ETTSEEEEEECCTTTT
T ss_pred CCCEEEEEECCCC-cEEEEec-CcccCCEEEEEECCCCCEEEEE-eCCCeEEEEEcCCCCc
Confidence 9999999999987 3333321 2389999999999999999999 9999999999876543
No 57
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.4e-37 Score=340.27 Aligned_cols=288 Identities=18% Similarity=0.350 Sum_probs=253.6
Q ss_pred hhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC
Q 010296 152 FRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD 231 (513)
Q Consensus 152 ~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 231 (513)
...+.+|.+.|++++|+|++++|++|+.||+|+|||+.++..+..+ .+|...|++++|+|+
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~-------------------~~h~~~v~~~~~s~~ 668 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDI-------------------KAHEDEVLCCAFSSD 668 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-------------------CCCSSCEEEEEECTT
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEe-------------------ccCCCCEEEEEEecC
Confidence 3457799999999999999999999999999999999999877654 579999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEec--CCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEE
Q 010296 232 GRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQ--GTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLT 309 (513)
Q Consensus 232 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 309 (513)
+++|++|+.||.|+|||+.+++.+..+.+|...|.+++|+| ++.++++++.|+.|++||+.+++++..+.+|...|.+
T Consensus 669 ~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~ 748 (1249)
T 3sfz_A 669 DSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNH 748 (1249)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEE
Confidence 99999999999999999999999999999999999999999 5568999999999999999999999999999999999
Q ss_pred EEeeCCC-eEEEEeCCCcEEEEecCCCeeeEEec--------------CCCCeeEEEeecCCeEEEEeCCCCEEEEecCC
Q 010296 310 IDCLRKE-RVLTVGRDRSMQLWKVPEESRLVFRA--------------PASSLECCCFISNDEFLSGSDDGSIELWSLLR 374 (513)
Q Consensus 310 ~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~ 374 (513)
++|+|++ .+++++.|+.|++||+.++....... ....+.+++|+|++.+++++.++.+.+|++.+
T Consensus 749 ~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~ 828 (1249)
T 3sfz_A 749 CRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHT 828 (1249)
T ss_dssp EEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTT
T ss_pred EEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecC
Confidence 9999987 56689999999999998876553221 23368889999999866555689999999999
Q ss_pred CCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 375 KKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
+..+..+... |...|.+++|+|+++++++++.+|.|++|++.++
T Consensus 829 ~~~~~~~~~~------------------------------------~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~ 872 (1249)
T 3sfz_A 829 SGLLAEIHTG------------------------------------HHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR 872 (1249)
T ss_dssp CCEEEEEECS------------------------------------SSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT
T ss_pred CCceeEEcCC------------------------------------CCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9988887633 3344999999999999999999999999999987
Q ss_pred CcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccC
Q 010296 455 TKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHL 498 (513)
Q Consensus 455 ~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~ 498 (513)
..+..+. .|.+.|++++|+|+|++|+++ +.||.|++|+..
T Consensus 873 -~~~~~~~--~h~~~v~~v~~spdg~~l~s~-s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 873 -LKVADCR--GHLSWVHGVMFSPDGSSFLTA-SDDQTIRVWETK 912 (1249)
T ss_dssp -EEEEEEC--CCSSCEEEEEECTTSSEEEEE-ETTSCEEEEEHH
T ss_pred -ceeeecC--CCccceEEEEECCCCCEEEEE-eCCCeEEEEEcc
Confidence 3333333 388999999999999999999 899999999864
No 58
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.5e-37 Score=301.68 Aligned_cols=284 Identities=21% Similarity=0.381 Sum_probs=241.5
Q ss_pred cchhhhhccCCCe-EEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE
Q 010296 150 DEFRVLLKHRQSV-TAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV 228 (513)
Q Consensus 150 ~~~~~~~~h~~~V-~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 228 (513)
.....+.+|...| +++.+ ++++|++|+.||+|++||+.+++.+..+ .+|...|++++|
T Consensus 112 ~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~-------------------~~h~~~V~~l~~ 170 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQL-------------------SGHDGGVWALKY 170 (464)
T ss_dssp CEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEE-------------------CCCSSCEEEEEE
T ss_pred cceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEE-------------------eCCCcCEEEEEE
Confidence 4456788998885 66666 5679999999999999999998877654 589999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEe--cCCCeEEEEeCCCcEEEEeCCCCce----------
Q 010296 229 SSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFR--QGTSELFSGSFDRTVKIWNAEDRAY---------- 296 (513)
Q Consensus 229 s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~---------- 296 (513)
+|++ +|++|+.||+|++||+.+++.+..+.+|...|.+++|+ +++.+|++++.||.|++||+.++..
T Consensus 171 ~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~ 249 (464)
T 3v7d_B 171 AHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY 249 (464)
T ss_dssp CSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCS
T ss_pred cCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCc
Confidence 9988 99999999999999999999999999999999999998 5778999999999999999987652
Q ss_pred -------------eEEeecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe-EEEE
Q 010296 297 -------------ISTLFGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE-FLSG 361 (513)
Q Consensus 297 -------------~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~-~~~~ 361 (513)
+..+.+|...+.++... ...+++++.|+.|++||+.+...+ .+..|...+.+++|+|++. +++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg 328 (464)
T 3v7d_B 250 PLVFHTPEENPYFVGVLRGHMASVRTVSGH-GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISA 328 (464)
T ss_dssp SEEESCGGGCTTEEEEECCCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred ceEeeccCCCeEEEEEccCccceEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEE
Confidence 44567788888887432 346779999999999999988776 5667889999999999885 8899
Q ss_pred eCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec
Q 010296 362 SDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA 441 (513)
Q Consensus 362 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~ 441 (513)
+.||.|++||+.+++++..+.. |...|.+++|+ +.+|++|+
T Consensus 329 ~~dg~i~vwd~~~~~~~~~~~~-------------------------------------h~~~v~~~~~~--~~~l~s~s 369 (464)
T 3v7d_B 329 SMDTTIRIWDLENGELMYTLQG-------------------------------------HTALVGLLRLS--DKFLVSAA 369 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECC-------------------------------------CSSCEEEEEEC--SSEEEEEE
T ss_pred eCCCcEEEEECCCCcEEEEEeC-------------------------------------CCCcEEEEEEc--CCEEEEEe
Confidence 9999999999999998888743 33449999997 47999999
Q ss_pred CCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCc
Q 010296 442 GNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 442 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
.||.|++||+.+... .....+...+..++|+|++++|+++ + ||.|++|++..+.
T Consensus 370 ~dg~v~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~-~-dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 370 ADGSIRGWDANDYSR----KFSYHHTNLSAITTFYVSDNILVSG-S-ENQFNIYNLRSGK 423 (464)
T ss_dssp TTSEEEEEETTTCCE----EEEEECTTCCCEEEEEECSSEEEEE-E-TTEEEEEETTTCC
T ss_pred CCCcEEEEECCCCce----eeeecCCCCccEEEEEeCCCEEEEe-c-CCeEEEEECCCCc
Confidence 999999999988732 2222356678889999999999988 5 8999999987764
No 59
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2e-37 Score=291.90 Aligned_cols=261 Identities=19% Similarity=0.314 Sum_probs=211.7
Q ss_pred cchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEc
Q 010296 150 DEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVS 229 (513)
Q Consensus 150 ~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 229 (513)
.+...+.+|...|++++|+|++.+|++|+.|++|++||+.++..+..+ .+|...|++++|+
T Consensus 67 ~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~-------------------~~h~~~v~~v~~s 127 (343)
T 2xzm_R 67 IPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRF-------------------VGHQSEVYSVAFS 127 (343)
T ss_dssp EEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEE-------------------ECCCSCEEEEEEC
T ss_pred cccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEE-------------------cCCCCcEEEEEEC
Confidence 445678899999999999999999999999999999999998876644 6799999999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCcceeee--ccCcCCCeEEEEEecCC----------CeEEEEeCCCcEEEEeCCCCcee
Q 010296 230 SDGRYLASGGLDRHIHLWDTRIQEHIQA--FPGHRGPVSCLTFRQGT----------SELFSGSFDRTVKIWNAEDRAYI 297 (513)
Q Consensus 230 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~----------~~l~~~~~dg~i~iwd~~~~~~~ 297 (513)
|++++|++++.|+.|++||+........ ...|...|.+++|+|++ .+|++++.|+.|++||. .....
T Consensus 128 p~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~ 206 (343)
T 2xzm_R 128 PDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIR 206 (343)
T ss_dssp SSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEE
T ss_pred CCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCcee
Confidence 9999999999999999999974433222 23689999999999987 78999999999999994 55677
Q ss_pred EEeecccCCeEEEEeeCCCe-EEEEeCCCcEEEEecCC-CeeeEEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCC
Q 010296 298 STLFGHQSEVLTIDCLRKER-VLTVGRDRSMQLWKVPE-ESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRK 375 (513)
Q Consensus 298 ~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~ 375 (513)
..+.+|...|.+++|+|++. |++++.|+.|++||+.. ........+...|.+++|+|++.+++++.|+.|++|++.++
T Consensus 207 ~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~ 286 (343)
T 2xzm_R 207 YTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQ 286 (343)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSC
T ss_pred EEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCC
Confidence 78889999999999999884 56899999999999943 33334444566799999999998888888999999999887
Q ss_pred CeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 376 KPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
+............. . ......|...|++++|+|+|++|++|+.||.|++|++.++
T Consensus 287 ~~~~~~~~~~~~~~-------------~-----------~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 287 SKAPVCTIEAEPIT-------------K-----------AEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CSCSEEECCCCSGG-------------G-----------BTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred CCCceEEeecCcch-------------h-----------hhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 65442211100000 0 0000245566999999999999999999999999998654
No 60
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.1e-36 Score=297.77 Aligned_cols=294 Identities=19% Similarity=0.359 Sum_probs=252.0
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCccc
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKH 222 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (513)
+|+......+..+.+|.+.|++++|+ +.+|++|+.||+|++||+.+++.+..+ .+|...
T Consensus 143 vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~-------------------~~h~~~ 201 (445)
T 2ovr_B 143 VWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTL-------------------YGHTST 201 (445)
T ss_dssp EEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEE-------------------CCCSSC
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEE-------------------CCCCCc
Confidence 56667777888899999999999997 579999999999999999998877654 578899
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeec
Q 010296 223 ILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFG 302 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 302 (513)
|.+++|+ +++|++|+.||.|++||+.+++.+..+.+|...|.+++| ++.+|++++.||.|++||+.+++.+..+.+
T Consensus 202 v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 277 (445)
T 2ovr_B 202 VRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQG 277 (445)
T ss_dssp EEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECC
T ss_pred EEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecC
Confidence 9999996 568999999999999999999999999999999999999 678899999999999999999999999999
Q ss_pred ccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEe
Q 010296 303 HQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIV 381 (513)
Q Consensus 303 ~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~ 381 (513)
|...|.++.| ....+++++.|+.|++||+.++... .+..|...+.++.+.+ ..+++++.||.|++||+.+++++..+
T Consensus 278 ~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~ 355 (445)
T 2ovr_B 278 HTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTL 355 (445)
T ss_dssp CSSCEEEEEE-CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCCceEEEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeC-CEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 9999999999 4457789999999999999888766 5667777888887753 47889999999999999999988887
Q ss_pred ecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeee
Q 010296 382 KNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPL 461 (513)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~ 461 (513)
... ..|...|++++|+ +++|++|+.||.|++||+.++ ..+..+
T Consensus 356 ~~~----------------------------------~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~-~~~~~~ 398 (445)
T 2ovr_B 356 QGP----------------------------------NKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTG-EFIRNL 398 (445)
T ss_dssp CST----------------------------------TSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTC-CEEEEE
T ss_pred ccC----------------------------------CCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCC-ceeeee
Confidence 532 2244559999996 579999999999999999988 344444
Q ss_pred ee---cCcccEEEEEEeecCCCEEEEEecCCCc----ccccccCCCc
Q 010296 462 YN---LPLVGFVNSLAFAKSGQFLIAGVGQEPR----LGRWGHLPAA 501 (513)
Q Consensus 462 ~~---~~~~~~v~~v~~sp~~~~l~~~~~~dg~----v~~W~~~~~~ 501 (513)
.. ..+.+.|++++|+|++.+|+++ +.||+ |.+||.....
T Consensus 399 ~~~~~~~~~~~v~~~~~s~~~~~la~~-~~dg~~~~~l~v~df~~~~ 444 (445)
T 2ovr_B 399 VTLESGGSGGVVWRIRASNTKLVCAVG-SRNGTEETKLLVLDFDVDM 444 (445)
T ss_dssp EECTTGGGTCEEEEEEECSSEEEEEEE-CSSSSSCCEEEEEECCCCC
T ss_pred eccccCCCCceEEEEEecCCEEEEEEc-ccCCCCccEEEEEECCCCC
Confidence 21 2478899999999999999999 88997 9999987653
No 61
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=283.26 Aligned_cols=276 Identities=20% Similarity=0.317 Sum_probs=232.3
Q ss_pred eEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCC
Q 010296 162 VTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLD 241 (513)
Q Consensus 162 V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 241 (513)
+++|+||+++ +||+| .|++|+|||+.+++.+..+ ...+|...|++++|+|++++|++|+.|
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~-----------------~~~~~~~~V~~v~~~~~~~~l~sgs~D 88 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLL-----------------QMEQPGEYISSVAWIKEGNYLAVGTSS 88 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEE-----------------ECCSTTCCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEE-----------------EecCCCCeEEEEEECCCCCEEEEEECC
Confidence 5789999986 66665 5999999999999887655 345788899999999999999999999
Q ss_pred CcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCC-ceeEEeecccCCeEEEEeeCCC-eEE
Q 010296 242 RHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDR-AYISTLFGHQSEVLTIDCLRKE-RVL 319 (513)
Q Consensus 242 g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~~ 319 (513)
|+|++|++.+++.+..+.+|...+.++.+ ++..|++++.++.+++|+.... ..+..+.+|...+..+.+.+++ .++
T Consensus 89 g~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (318)
T 4ggc_A 89 AEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLA 166 (318)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred CcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEE
Confidence 99999999999999999999998887665 4578999999999999999875 4466788899999999999987 556
Q ss_pred EEeCCCcEEEEecCCCee-----eEEecCCCCeeEEEeecCCe----EEEEeCCCCEEEEecCCCCeeEEeecCCCcccC
Q 010296 320 TVGRDRSMQLWKVPEESR-----LVFRAPASSLECCCFISNDE----FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDG 390 (513)
Q Consensus 320 ~~~~d~~i~iwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~----~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 390 (513)
+++.|+.|++||+.+++. .....+...+.++.+++.+. +++++.++.|++|+...............
T Consensus 167 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~---- 242 (318)
T 4ggc_A 167 SGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ---- 242 (318)
T ss_dssp EEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSC----
T ss_pred EEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceee----
Confidence 899999999999987542 24566778899999998763 34677889999999998887766543322
Q ss_pred CCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec--CCCcEEEEEeCCCCcceeeeeecCccc
Q 010296 391 LKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA--GNGSVRLWAIESETKDIQPLYNLPLVG 468 (513)
Q Consensus 391 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~--~dg~v~vwd~~~~~~~~~~~~~~~~~~ 468 (513)
+..+.|+|++..+++++ .||.|+|||+.++ ..+..+.. |.+
T Consensus 243 ----------------------------------v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~-~~~~~l~g--H~~ 285 (318)
T 4ggc_A 243 ----------------------------------VCSILWSPHYKELISGHGFAQNQLVIWKYPTM-AKVAELKG--HTS 285 (318)
T ss_dssp ----------------------------------EEEEEEETTTTEEEEEECTTTCCEEEEETTTC-CEEEEECC--CSS
T ss_pred ----------------------------------eeeeeecccccceEEEEEcCCCEEEEEECCCC-cEEEEEcC--CCC
Confidence 89999999998887654 7999999999987 45555544 889
Q ss_pred EEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 469 FVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 469 ~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
.|++|+|+|+|++|+++ +.||+|+||++...
T Consensus 286 ~V~~l~~spdg~~l~S~-s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 286 RVLSLTMSPDGATVASA-AADETLRLWRCFEL 316 (318)
T ss_dssp CEEEEEECTTSSCEEEE-ETTTEEEEECCSCC
T ss_pred CEEEEEEcCCCCEEEEE-ecCCeEEEEECCCC
Confidence 99999999999999999 99999999998653
No 62
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.9e-38 Score=298.42 Aligned_cols=268 Identities=18% Similarity=0.277 Sum_probs=225.3
Q ss_pred cccCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcc
Q 010296 142 RVQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSK 221 (513)
Q Consensus 142 ~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (513)
++|+.........+..|...|.+++|+|++++|++|+.|+.|+||++.+...... .......+.+|..
T Consensus 91 ~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~------------~~~~~~~~~gh~~ 158 (380)
T 3iz6_a 91 IVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDG------------NMPVSRVLTGHKG 158 (380)
T ss_dssp EEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCC------------SSTTCCBCCCCSS
T ss_pred EEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccC------------CccceeeccCCCc
Confidence 3577777788888999999999999999999999999999999999976432110 0111224578999
Q ss_pred cEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCcceeeec-----cCcCCCeEEEEEec-CCCeEEEEeCCCcEEEEeCC-C
Q 010296 222 HILALAVSSD-GRYLASGGLDRHIHLWDTRIQEHIQAF-----PGHRGPVSCLTFRQ-GTSELFSGSFDRTVKIWNAE-D 293 (513)
Q Consensus 222 ~v~~~~~s~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~-~ 293 (513)
.|.++.|+|+ +..|++|+.|++|++||+.+++.+..+ .+|...|.+++|++ ++.+|++|+.|++|++||++ .
T Consensus 159 ~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~ 238 (380)
T 3iz6_a 159 YASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRIT 238 (380)
T ss_dssp CCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTT
T ss_pred ceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCC
Confidence 9999999996 457999999999999999999988776 67999999999987 78899999999999999998 4
Q ss_pred CceeEEeecccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeeeEEe-cC-------CCCeeEEEeecCCe-EEEEeC
Q 010296 294 RAYISTLFGHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRLVFR-AP-------ASSLECCCFISNDE-FLSGSD 363 (513)
Q Consensus 294 ~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~-~~-------~~~v~~~~~~~~~~-~~~~~~ 363 (513)
...+..+.+|...|.+++|+|++ .+++++.|++|++||++++..+... .+ ...+.+++|+|++. +++|+.
T Consensus 239 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~ 318 (380)
T 3iz6_a 239 SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS 318 (380)
T ss_dssp CCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT
T ss_pred CcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC
Confidence 57788899999999999999987 5668999999999999998776432 22 12488999999986 779999
Q ss_pred CCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCC
Q 010296 364 DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGN 443 (513)
Q Consensus 364 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d 443 (513)
||.|++||+.+++.+..+.... ..|...|++++|+|+|++|++|+.|
T Consensus 319 dg~i~vwd~~~~~~~~~~~~~~---------------------------------~~h~~~v~~l~~s~dg~~l~sgs~D 365 (380)
T 3iz6_a 319 NGDCYVWDTLLAEMVLNLGTLQ---------------------------------NSHEGRISCLGLSSDGSALCTGSWD 365 (380)
T ss_dssp TSCEEEEETTTCCEEEEECCSC---------------------------------SSCCCCCCEEEECSSSSEEEEECTT
T ss_pred CCCEEEEECCCCceEEEEeccc---------------------------------CCCCCceEEEEECCCCCEEEEeeCC
Confidence 9999999999988877663211 3455669999999999999999999
Q ss_pred CcEEEEEeCCC
Q 010296 444 GSVRLWAIESE 454 (513)
Q Consensus 444 g~v~vwd~~~~ 454 (513)
|+|+||++...
T Consensus 366 ~~i~iW~~~~~ 376 (380)
T 3iz6_a 366 KNLKIWAFSGH 376 (380)
T ss_dssp SCEEEEECCSS
T ss_pred CCEEEEecCCC
Confidence 99999999765
No 63
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.6e-37 Score=313.31 Aligned_cols=354 Identities=13% Similarity=0.162 Sum_probs=267.0
Q ss_pred ccCCCcc----cchhhhhccCCC-eEEEEECC--CCCeEEEEeCCceEEEEeCCCC--------ccccccC---------
Q 010296 143 VQKPEAT----DEFRVLLKHRQS-VTAVALSE--DDSKGFSASKDGSILHWDVSSG--------KGVKYLW--------- 198 (513)
Q Consensus 143 ~~~~~~~----~~~~~~~~h~~~-V~~~~~s~--~~~~l~t~~~dg~v~iwd~~~~--------~~~~~~~--------- 198 (513)
+|+.... .....+.+|.+. |++++|+| ++++|++|+.||+|+||++.++ .....+.
T Consensus 43 v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 122 (615)
T 1pgu_A 43 VRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 122 (615)
T ss_dssp EEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEE
T ss_pred EEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEE
Confidence 4445445 677889999999 99999999 9999999999999999999744 2222221
Q ss_pred ---CChhhh-------------ccCCCCCCCCCCCCCcccEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCcceeeeccCc
Q 010296 199 ---PSEEVL-------------KSHGAKDPQGRATKQSKHILALAVSSDGR-YLASGGLDRHIHLWDTRIQEHIQAFPGH 261 (513)
Q Consensus 199 ---~~~~~~-------------~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 261 (513)
+....+ ...........+.+|...|++++|+|++. +|++++.|+.|++||+.+++.+..+.+|
T Consensus 123 ~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~ 202 (615)
T 1pgu_A 123 SWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTH 202 (615)
T ss_dssp EECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSS
T ss_pred EEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeeccc
Confidence 111000 00111223345667899999999999998 8999999999999999999999999999
Q ss_pred CC---CeEEEEEecC-CCeEEEEeCCCcEEEEeCCCCceeEEe-e---cccCCeEEEEeeCCC-eEEEEeCCCcEEEEec
Q 010296 262 RG---PVSCLTFRQG-TSELFSGSFDRTVKIWNAEDRAYISTL-F---GHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKV 332 (513)
Q Consensus 262 ~~---~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~-~---~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~ 332 (513)
.. .|.+++|+|+ +++|++++.||.|++||+.+++.+..+ . .|...|.++.|+ ++ .+++++.|+.|++||+
T Consensus 203 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~ 281 (615)
T 1pgu_A 203 HKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDV 281 (615)
T ss_dssp SCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEET
T ss_pred CCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEEC
Confidence 99 9999999999 999999999999999999999999888 5 899999999999 66 5668999999999999
Q ss_pred CCCeeeE-EecC----CCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCC--------------
Q 010296 333 PEESRLV-FRAP----ASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKN-------------- 393 (513)
Q Consensus 333 ~~~~~~~-~~~~----~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-------------- 393 (513)
.++.... +..+ ...+.++.++....+++++.+|.|++||+.+++++..+..+......+..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~ 361 (615)
T 1pgu_A 282 TTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIME 361 (615)
T ss_dssp TTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEE
T ss_pred CCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEE
Confidence 9887764 3333 25677888876667999999999999999988777666543221111000
Q ss_pred ------------------cc--------cCcCccccccC-----------------------------------------
Q 010296 394 ------------------FE--------QDEGKISNGHS----------------------------------------- 406 (513)
Q Consensus 394 ------------------~~--------~~~~~i~~~~~----------------------------------------- 406 (513)
+. ..++.+..+..
T Consensus 362 w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (615)
T 1pgu_A 362 WSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIK 441 (615)
T ss_dssp TTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceee
Confidence 00 00011111100
Q ss_pred ----------------------C-CCCCCCCC--------cCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCC
Q 010296 407 ----------------------E-NGNLNPGS--------YHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESET 455 (513)
Q Consensus 407 ----------------------~-~~~~~~~~--------~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~ 455 (513)
. .+.+.... .....|...|++++|+|++++|++++.||.|++|++.++
T Consensus 442 ~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~- 520 (615)
T 1pgu_A 442 SVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSR- 520 (615)
T ss_dssp EEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-
T ss_pred ecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCC-
Confidence 0 11111000 222457788999999999999999999999999999887
Q ss_pred cceeeeeecCcccEEEEEEeec----------CCCEEEEEecCCCcccccccCCC
Q 010296 456 KDIQPLYNLPLVGFVNSLAFAK----------SGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 456 ~~~~~~~~~~~~~~v~~v~~sp----------~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
..+..+.. .|...|++++|+| ++++|+++ +.||.|++|++..+
T Consensus 521 ~~~~~~~~-~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 521 EVKTSRWA-FRTSKINAISWKPAEKGANEEEIEEDLVATG-SLDTNIFIYSVKRP 573 (615)
T ss_dssp EEEECCSC-CCSSCEEEEEECCCC------CCSCCEEEEE-ETTSCEEEEESSCT
T ss_pred cceeEeec-CCCCceeEEEEcCccccccccccCCCEEEEE-cCCCcEEEEECCCC
Confidence 33322221 1788999999999 99999999 89999999999775
No 64
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-37 Score=324.66 Aligned_cols=202 Identities=11% Similarity=0.093 Sum_probs=175.9
Q ss_pred hccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEE
Q 010296 156 LKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYL 235 (513)
Q Consensus 156 ~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 235 (513)
.+|.+.|++++|+|++++||+|+.||+|+||+..+...... ..|...|.+++|+| +++|
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~--------------------~~~~~~V~~l~fsp-g~~L 72 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIK--------------------LEDRSAIKEMRFVK-GIYL 72 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEE--------------------CSSCCCEEEEEEET-TTEE
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEE--------------------cCCCCCEEEEEEcC-CCEE
Confidence 48999999999999999999999999999999887655432 24678899999999 8899
Q ss_pred EEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCcee-----------EEeeccc
Q 010296 236 ASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYI-----------STLFGHQ 304 (513)
Q Consensus 236 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-----------~~~~~~~ 304 (513)
++++.|++|+|||+.+++++..+. |...|++++|+|++++|++|+.||.|++||+.++.+. ..+.+|.
T Consensus 73 ~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~ 151 (902)
T 2oaj_A 73 VVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARL 151 (902)
T ss_dssp EEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCC
T ss_pred EEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCC
Confidence 999999999999999999988886 7789999999999999999999999999999988753 2345688
Q ss_pred CCeEEEEeeCC--CeEEEEeCCCcEEEEecCCCeeeE-EecC------------------CCCeeEEEeecCCe-EEEEe
Q 010296 305 SEVLTIDCLRK--ERVLTVGRDRSMQLWKVPEESRLV-FRAP------------------ASSLECCCFISNDE-FLSGS 362 (513)
Q Consensus 305 ~~v~~~~~~~~--~~~~~~~~d~~i~iwd~~~~~~~~-~~~~------------------~~~v~~~~~~~~~~-~~~~~ 362 (513)
..|.+++|+|+ +.+++++.|+.| +||+++..... +..+ ...|.+++|+|++. |++++
T Consensus 152 ~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs 230 (902)
T 2oaj_A 152 SPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH 230 (902)
T ss_dssp CCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE
T ss_pred CCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE
Confidence 99999999996 367789999999 99999887663 3333 36799999999986 88999
Q ss_pred CCCCEEEEecCCCCeeEE
Q 010296 363 DDGSIELWSLLRKKPVYI 380 (513)
Q Consensus 363 ~dg~i~iwd~~~~~~~~~ 380 (513)
.||.|++||+.+++++..
T Consensus 231 ~Dg~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 231 EDNSLVFWDANSGHMIMA 248 (902)
T ss_dssp TTCCEEEEETTTCCEEEE
T ss_pred CCCeEEEEECCCCcEEEE
Confidence 999999999999887653
No 65
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.9e-36 Score=297.76 Aligned_cols=288 Identities=17% Similarity=0.297 Sum_probs=245.0
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCccc
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKH 222 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (513)
+|+......+..+.+|.+.|++++|+|++ +|++|+.||+|++||+.++..+..+ .+|...
T Consensus 146 vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~-------------------~~h~~~ 205 (464)
T 3v7d_B 146 VYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVF-------------------EGHNST 205 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEE-------------------CCCSSC
T ss_pred EEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEE-------------------CCCCCc
Confidence 56667777888899999999999999988 9999999999999999998877654 578999
Q ss_pred EEEEEEc--CCCCEEEEEeCCCcEEEEeCCCcce-----------------------eeeccCcCCCeEEEEEecCCCeE
Q 010296 223 ILALAVS--SDGRYLASGGLDRHIHLWDTRIQEH-----------------------IQAFPGHRGPVSCLTFRQGTSEL 277 (513)
Q Consensus 223 v~~~~~s--~~~~~l~s~~~dg~i~vwd~~~~~~-----------------------~~~~~~~~~~v~~~~~~~~~~~l 277 (513)
|.+++|+ +++.+|++|+.||.|++||+.++.. +..+.+|...|.++ ++++++|
T Consensus 206 v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l 283 (464)
T 3v7d_B 206 VRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIV 283 (464)
T ss_dssp EEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEE
T ss_pred cEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEE
Confidence 9999998 5789999999999999999987653 45677788888877 5678999
Q ss_pred EEEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecC
Q 010296 278 FSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISN 355 (513)
Q Consensus 278 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~ 355 (513)
++++.||.|++||+.+++++..+.+|...|.+++|+|++ .+++++.|+.|++||+.++..+ .+..|...+.++.+++
T Consensus 284 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~- 362 (464)
T 3v7d_B 284 VSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD- 362 (464)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS-
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC-
Confidence 999999999999999999999999999999999999987 5669999999999999988776 6678889999999974
Q ss_pred CeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCC
Q 010296 356 DEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSD 435 (513)
Q Consensus 356 ~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 435 (513)
..+++++.||.|++||+.++.......... .+..++|+|+++
T Consensus 363 ~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~ 404 (464)
T 3v7d_B 363 KFLVSAAADGSIRGWDANDYSRKFSYHHTN--------------------------------------LSAITTFYVSDN 404 (464)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECTT--------------------------------------CCCEEEEEECSS
T ss_pred CEEEEEeCCCcEEEEECCCCceeeeecCCC--------------------------------------CccEEEEEeCCC
Confidence 579999999999999999987766654322 277889999999
Q ss_pred EEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccc
Q 010296 436 LAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWG 496 (513)
Q Consensus 436 ~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~ 496 (513)
+|++|+ ||.|+|||+.++ +.+... ...+...|.+++|+ +..++++++.+|.+.+|-
T Consensus 405 ~l~~~~-dg~i~iwd~~~g-~~~~~~-~~~~~~~v~~v~~~--~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 405 ILVSGS-ENQFNIYNLRSG-KLVHAN-ILKDADQIWSVNFK--GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp EEEEEE-TTEEEEEETTTC-CEEESC-TTTTCSEEEEEEEE--TTEEEEEEEETTEEEEEE
T ss_pred EEEEec-CCeEEEEECCCC-cEEehh-hccCCCcEEEEEec--CCEEEEEEEeCCeEEEEE
Confidence 999998 899999999998 333321 23478999999997 667777768888776663
No 66
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=304.14 Aligned_cols=306 Identities=11% Similarity=0.149 Sum_probs=224.1
Q ss_pred ccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCc------------ccEE
Q 010296 157 KHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQS------------KHIL 224 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~v~ 224 (513)
.|.+.|++|+|+|++++||+|+.||.|+||++.++......... .......+.+|. ..|+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~--------~~~~~~~~~~h~~~~~~~~~~~~~~~V~ 97 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRG--------EYNVYSTFQSHEPEFDYLKSLEIEEKIN 97 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCC--------CEEEEEEEECCCCEEEGGGTEEECCCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCccccc--------ceeEecccccccccccccccccccCceE
Confidence 57899999999999999999999999999999877621100000 000011234676 8899
Q ss_pred EEEEcCCC--CEEEEEeCCCcEEEEeCCCccee---------------------------------------ee-ccCcC
Q 010296 225 ALAVSSDG--RYLASGGLDRHIHLWDTRIQEHI---------------------------------------QA-FPGHR 262 (513)
Q Consensus 225 ~~~~s~~~--~~l~s~~~dg~i~vwd~~~~~~~---------------------------------------~~-~~~~~ 262 (513)
+++|+|++ .+|++++.|+.|++|++.++... .. +.+|.
T Consensus 98 ~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 177 (447)
T 3dw8_B 98 KIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHT 177 (447)
T ss_dssp EEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCS
T ss_pred EEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCC
Confidence 99999998 79999999999999998764432 12 36799
Q ss_pred CCeEEEEEecCCCeEEEEeCCCcEEEEeCCC-CceeE-------EeecccCCeEEEEeeCCC--eEEEEeCCCcEEEEec
Q 010296 263 GPVSCLTFRQGTSELFSGSFDRTVKIWNAED-RAYIS-------TLFGHQSEVLTIDCLRKE--RVLTVGRDRSMQLWKV 332 (513)
Q Consensus 263 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~-------~~~~~~~~v~~~~~~~~~--~~~~~~~d~~i~iwd~ 332 (513)
..|.+++|+|++++|++| .|+.|++||+.+ +..+. .+.+|...|.+++|+|++ .+++++.|+.|++||+
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred cceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 999999999999999998 799999999984 44444 255789999999999986 5679999999999999
Q ss_pred CCCee-----eEEecCCC------------CeeEEEeecCCe-EEEEeCCCCEEEEecCC-CCeeEEeecCCCcccCCCC
Q 010296 333 PEESR-----LVFRAPAS------------SLECCCFISNDE-FLSGSDDGSIELWSLLR-KKPVYIVKNAHPLLDGLKN 393 (513)
Q Consensus 333 ~~~~~-----~~~~~~~~------------~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~ 393 (513)
++... ..+..+.. .|.+++|+|++. |++++. +.|+|||+.+ ++++..+..+......+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~ 335 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCS 335 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHH
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccc
Confidence 98774 45566654 899999999996 567777 9999999997 7777666543211000000
Q ss_pred cccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeee------------
Q 010296 394 FEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPL------------ 461 (513)
Q Consensus 394 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~------------ 461 (513)
... ......+..++|+|++++|++|+.||.|+|||+.++.. +...
T Consensus 336 ~~~----------------------~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~ 392 (447)
T 3dw8_B 336 LYE----------------------NDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD-ITLEASRENNKPRTVL 392 (447)
T ss_dssp HHH----------------------TSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE-EEEECCSTTCCTTCBC
T ss_pred ccc----------------------ccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc-eeeeeccccccccccc
Confidence 000 00001144699999999999999999999999988732 2110
Q ss_pred ------------------eecCcccEEEEEEeecCCCEEEEEecCCCccccccc
Q 010296 462 ------------------YNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGH 497 (513)
Q Consensus 462 ------------------~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~ 497 (513)
..+.....|.+++|+|++.+||++ +.+ .+.+|..
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~-~~~-~~~~~~~ 444 (447)
T 3dw8_B 393 KPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVA-TTN-NLYIFQD 444 (447)
T ss_dssp CCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEE-CSS-CEEEEEC
T ss_pred CCccccccCCcccccccccccccCCceeEEEECCCCCEEEEE-ecc-eeeeecc
Confidence 011234678999999999999988 555 4777753
No 67
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-37 Score=291.69 Aligned_cols=253 Identities=15% Similarity=0.196 Sum_probs=212.1
Q ss_pred chhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCC--ccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE
Q 010296 151 EFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSG--KGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV 228 (513)
Q Consensus 151 ~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 228 (513)
.+..+.+|.+.|++++|+|++++|++|+.||.|+||++... ..+.. +.+|...|++++|
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------------------~~~h~~~v~~~~~ 63 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDT-------------------LTGHEGPVWRVDW 63 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEE-------------------ECCCSSCEEEEEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeE-------------------ecCCCCcEEEEEe
Confidence 45678899999999999999999999999999999999743 33332 3678999999999
Q ss_pred cCC--CCEEEEEeCCCcEEEEeCCCcc--eeeeccCcCCCeEEEEEecC--CCeEEEEeCCCcEEEEeCCCCc--eeEEe
Q 010296 229 SSD--GRYLASGGLDRHIHLWDTRIQE--HIQAFPGHRGPVSCLTFRQG--TSELFSGSFDRTVKIWNAEDRA--YISTL 300 (513)
Q Consensus 229 s~~--~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~ 300 (513)
+|+ +.+|++|+.||.|++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||+.++. ....+
T Consensus 64 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 143 (379)
T 3jrp_A 64 AHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII 143 (379)
T ss_dssp CCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE
T ss_pred CCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe
Confidence 987 9999999999999999999887 77888889999999999999 9999999999999999998873 34566
Q ss_pred ecccCCeEEEEeeC-------------CC-eEEEEeCCCcEEEEecCCCee-----eEEecCCCCeeEEEeecC---Ce-
Q 010296 301 FGHQSEVLTIDCLR-------------KE-RVLTVGRDRSMQLWKVPEESR-----LVFRAPASSLECCCFISN---DE- 357 (513)
Q Consensus 301 ~~~~~~v~~~~~~~-------------~~-~~~~~~~d~~i~iwd~~~~~~-----~~~~~~~~~v~~~~~~~~---~~- 357 (513)
..|...|.+++|+| ++ .+++++.|+.|++||++.... ..+..|...|.+++|+|+ +.
T Consensus 144 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~ 223 (379)
T 3jrp_A 144 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 223 (379)
T ss_dssp ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCe
Confidence 78999999999999 34 667999999999999976542 256678899999999999 65
Q ss_pred EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEE
Q 010296 358 FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLA 437 (513)
Q Consensus 358 ~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 437 (513)
|++++.||.|++||+.++........... ..+...|++++|+|++++|
T Consensus 224 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--------------------------------~~~~~~v~~~~~s~~g~~l 271 (379)
T 3jrp_A 224 LASVSQDRTCIIWTQDNEQGPWKKTLLKE--------------------------------EKFPDVLWRASWSLSGNVL 271 (379)
T ss_dssp EEEEETTSCEEEEEESSTTSCCEEEESSS--------------------------------SCCSSCEEEEEECSSSCCE
T ss_pred EEEEeCCCEEEEEeCCCCCccceeeeecc--------------------------------ccCCCcEEEEEEcCCCCEE
Confidence 78999999999999988753222111100 2344559999999999999
Q ss_pred EEecCCCcEEEEEeCCC
Q 010296 438 ASGAGNGSVRLWAIESE 454 (513)
Q Consensus 438 ~~g~~dg~v~vwd~~~~ 454 (513)
++++.||.|+||++...
T Consensus 272 ~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 272 ALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EEEESSSSEEEEEEEET
T ss_pred EEecCCCcEEEEeCCCC
Confidence 99999999999999843
No 68
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.4e-38 Score=291.94 Aligned_cols=247 Identities=18% Similarity=0.242 Sum_probs=200.3
Q ss_pred hhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC--C
Q 010296 154 VLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS--D 231 (513)
Q Consensus 154 ~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~ 231 (513)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+.++...... .+.+|...|++++|+| +
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~-----------------~l~gH~~~V~~v~~~~~~~ 70 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIA-----------------DLRGHEGPVWQVAWAHPMY 70 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEE-----------------EEECCSSCEEEEEECCGGG
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEE-----------------EEcCCCccEEEEEeCCCCC
Confidence 46689999999999999999999999999999999876432110 2368999999999986 4
Q ss_pred CCEEEEEeCCCcEEEEeCCCcc--eeeeccCcCCCeEEEEEecC--CCeEEEEeCCCcEEEEeCCCCce---eEEeeccc
Q 010296 232 GRYLASGGLDRHIHLWDTRIQE--HIQAFPGHRGPVSCLTFRQG--TSELFSGSFDRTVKIWNAEDRAY---ISTLFGHQ 304 (513)
Q Consensus 232 ~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~ 304 (513)
+++|++|+.|++|++||+.++. .+..+.+|...|.+++|+|+ +.+|++++.|+.|++|+++++.. ...+.+|.
T Consensus 71 ~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~ 150 (316)
T 3bg1_A 71 GNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHT 150 (316)
T ss_dssp SSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSS
T ss_pred CCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeecccc
Confidence 8999999999999999998873 56678889999999999998 78999999999999999987632 34556788
Q ss_pred CCeEEEEeeCC------------------CeEEEEeCCCcEEEEecCCCe----eeEEecCCCCeeEEEeecCC-----e
Q 010296 305 SEVLTIDCLRK------------------ERVLTVGRDRSMQLWKVPEES----RLVFRAPASSLECCCFISND-----E 357 (513)
Q Consensus 305 ~~v~~~~~~~~------------------~~~~~~~~d~~i~iwd~~~~~----~~~~~~~~~~v~~~~~~~~~-----~ 357 (513)
..|.++.|+|+ ..|++++.|+.|++||+.... ...+..|...|.+++|+|++ .
T Consensus 151 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~ 230 (316)
T 3bg1_A 151 IGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230 (316)
T ss_dssp SCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCE
T ss_pred CCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCce
Confidence 99999999986 367799999999999997542 22466788999999999985 4
Q ss_pred EEEEeCCCCEEEEecCCCCe----eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecC
Q 010296 358 FLSGSDDGSIELWSLLRKKP----VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGG 433 (513)
Q Consensus 358 ~~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 433 (513)
|++++.|++|+||++.+... ...+ ..|...|.+++|+|+
T Consensus 231 las~s~D~~v~iw~~~~~~~~~~~~~~~-------------------------------------~~~~~~v~~v~~sp~ 273 (316)
T 3bg1_A 231 IASCSQDGRVFIWTCDDASSNTWSPKLL-------------------------------------HKFNDVVWHVSWSIT 273 (316)
T ss_dssp EEEEETTCEEEEEECSSTTCCCCBCCEE-------------------------------------EECSSCEEEEEECTT
T ss_pred EEEEcCCCeEEEEEccCccccchhhhhh-------------------------------------hcCCCcEEEEEEcCC
Confidence 88999999999999876311 1111 122344999999999
Q ss_pred CCEEEEecCCCcEEEEEeCCC
Q 010296 434 SDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 434 ~~~l~~g~~dg~v~vwd~~~~ 454 (513)
+++|++++.||.|+||+....
T Consensus 274 g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 274 ANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp TCCEEEEESSSCEEEEEECTT
T ss_pred CCEEEEEcCCCeEEEEEECCC
Confidence 999999999999999998643
No 69
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-36 Score=291.73 Aligned_cols=238 Identities=25% Similarity=0.435 Sum_probs=207.8
Q ss_pred CCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEe
Q 010296 160 QSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGG 239 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 239 (513)
..|++++|+|++++|++|+.|++|+|||+.+++.+..+ .+|...|++++|+|++.+|++|+
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~-------------------~~h~~~v~~~~~~p~~~~l~s~s 184 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMIL-------------------QGHEQDIYSLDYFPSGDKLVSGS 184 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-------------------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE-------------------ccCCCCEEEEEEcCCCCEEEEec
Confidence 45999999999999999999999999999988776644 68999999999999999999999
Q ss_pred CCCcEEEEeCCCcceeeeccCcCCCeEEEEEec-CCCeEEEEeCCCcEEEEeCCCCceeEEe-------ecccCCeEEEE
Q 010296 240 LDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQ-GTSELFSGSFDRTVKIWNAEDRAYISTL-------FGHQSEVLTID 311 (513)
Q Consensus 240 ~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~v~~~~ 311 (513)
.|++|++||+.+++....+. +...+.+++|+| ++++|++++.|+.|++||+.++..+..+ .+|...|.+++
T Consensus 185 ~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 263 (393)
T 1erj_A 185 GDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVV 263 (393)
T ss_dssp TTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEE
T ss_pred CCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEE
Confidence 99999999999999887776 667899999999 8999999999999999999999887766 57889999999
Q ss_pred eeCCC-eEEEEeCCCcEEEEecCCCe-------------eeEEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCC
Q 010296 312 CLRKE-RVLTVGRDRSMQLWKVPEES-------------RLVFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKK 376 (513)
Q Consensus 312 ~~~~~-~~~~~~~d~~i~iwd~~~~~-------------~~~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~ 376 (513)
|+|++ .+++++.|+.|++||+.... ...+.+|...|.+++|++++. |++|+.|+.|++||+.+++
T Consensus 264 ~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 264 FTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe
Confidence 99988 46689999999999997532 235667888999999999885 7899999999999999999
Q ss_pred eeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEec------CCCEEEEecCCCcEEEEE
Q 010296 377 PVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCG------GSDLAASGAGNGSVRLWA 450 (513)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~------~~~~l~~g~~dg~v~vwd 450 (513)
++..+.. |...|.+++|++ ++++|++|+.||+|+||+
T Consensus 344 ~~~~l~~-------------------------------------h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 344 PLLMLQG-------------------------------------HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp EEEEEEC-------------------------------------CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred EEEEECC-------------------------------------CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECc
Confidence 8887753 334499999886 688999999999999999
Q ss_pred eCCC
Q 010296 451 IESE 454 (513)
Q Consensus 451 ~~~~ 454 (513)
+...
T Consensus 387 ~~~~ 390 (393)
T 1erj_A 387 YKKI 390 (393)
T ss_dssp EEEC
T ss_pred cccc
Confidence 8653
No 70
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=284.59 Aligned_cols=251 Identities=18% Similarity=0.268 Sum_probs=206.0
Q ss_pred hhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCE
Q 010296 155 LLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRY 234 (513)
Q Consensus 155 ~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 234 (513)
..+|...|++++|+|++++|++|+.|++|+||++..+...... .+.+|...|.+++|+|++++
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~-----------------~~~~h~~~v~~v~~sp~~~~ 119 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVT-----------------TLEGHENEVKSVAWAPSGNL 119 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEE-----------------EECCCSSCEEEEEECTTSSE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEE-----------------EccCCCCCceEEEEeCCCCE
Confidence 4689999999999999999999999999999998876432111 23689999999999999999
Q ss_pred EEEEeCCCcEEEEeCCCcc---eeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCc--eeEEeecccCCeEE
Q 010296 235 LASGGLDRHIHLWDTRIQE---HIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRA--YISTLFGHQSEVLT 309 (513)
Q Consensus 235 l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~ 309 (513)
|++|+.|+.|++||+.++. ++..+.+|...|.+++|+|++.+|++++.|+.|++|++.++. +...+.+|...|.+
T Consensus 120 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~ 199 (345)
T 3fm0_A 120 LATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWS 199 (345)
T ss_dssp EEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEE
T ss_pred EEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEE
Confidence 9999999999999998663 466788899999999999999999999999999999998875 45678899999999
Q ss_pred EEeeCCC-eEEEEeCCCcEEEEecCCCe---------------ee-EEe-cCCCCeeEEEeecCCe-EEEEeCCCCEEEE
Q 010296 310 IDCLRKE-RVLTVGRDRSMQLWKVPEES---------------RL-VFR-APASSLECCCFISNDE-FLSGSDDGSIELW 370 (513)
Q Consensus 310 ~~~~~~~-~~~~~~~d~~i~iwd~~~~~---------------~~-~~~-~~~~~v~~~~~~~~~~-~~~~~~dg~i~iw 370 (513)
++|+|++ .|++++.|++|++|+..... .+ .+. .|...|.+++|++++. +++++.|+.|++|
T Consensus 200 l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw 279 (345)
T 3fm0_A 200 LAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVF 279 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEE
Confidence 9999988 56689999999999963211 11 222 2677899999999885 8899999999999
Q ss_pred ecCCCCe----eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCC-CEEEEecCCCc
Q 010296 371 SLLRKKP----VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGS-DLAASGAGNGS 445 (513)
Q Consensus 371 d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~g~~dg~ 445 (513)
+...... ...+... ....|...|++++|+|++ .+||+|+.||+
T Consensus 280 ~~~~~~~~~~~~~~~~~~--------------------------------~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~ 327 (345)
T 3fm0_A 280 QEDPNSDPQQPTFSLTAH--------------------------------LHQAHSQDVNCVAWNPKEPGLLASCSDDGE 327 (345)
T ss_dssp EECTTSCTTSCCEEEEEE--------------------------------ETTSSSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EeCCCCCcceeeEEEEee--------------------------------ecccccCcEeEeEEeCCCceEEEEcCCCCc
Confidence 9876431 1111100 003456679999999988 59999999999
Q ss_pred EEEEEeCCC
Q 010296 446 VRLWAIESE 454 (513)
Q Consensus 446 v~vwd~~~~ 454 (513)
|+||++.+.
T Consensus 328 v~~W~~~~~ 336 (345)
T 3fm0_A 328 VAFWKYQRP 336 (345)
T ss_dssp EEEEEECC-
T ss_pred EEEEEecCC
Confidence 999999887
No 71
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.6e-36 Score=295.51 Aligned_cols=277 Identities=21% Similarity=0.410 Sum_probs=233.9
Q ss_pred hhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCE
Q 010296 155 LLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRY 234 (513)
Q Consensus 155 ~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 234 (513)
..+|...|+|++| ++++|++|+.||+|++||+.+++....+ .+|...|++++| ++++
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~-------------------~~h~~~v~~l~~--~~~~ 185 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRIL-------------------TGHTGSVLCLQY--DERV 185 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEE-------------------CCCSSCEEEEEC--CSSE
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEE-------------------cCCCCcEEEEEE--CCCE
Confidence 3467788999988 7899999999999999999998877654 678999999999 6889
Q ss_pred EEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCcee---EEeecccCCeEEEE
Q 010296 235 LASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYI---STLFGHQSEVLTID 311 (513)
Q Consensus 235 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~v~~~~ 311 (513)
|++|+.||.|++||+.+++.+..+.+|...|.+++|++ .+|++|+.||.|++||+.++..+ ..+.+|...|.++.
T Consensus 186 l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 263 (435)
T 1p22_A 186 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 263 (435)
T ss_dssp EEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEE
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEE
Confidence 99999999999999999999999999999999999974 58999999999999999987765 66788999999999
Q ss_pred eeCCCeEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccC
Q 010296 312 CLRKERVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDG 390 (513)
Q Consensus 312 ~~~~~~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 390 (513)
| ....+++++.|+.|++||+.++..+ .+..|...+.++.+. ...+++|+.||.|++||+.+++++..+..
T Consensus 264 ~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~------- 334 (435)
T 1p22_A 264 F-DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEG------- 334 (435)
T ss_dssp E-ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTCCEEEEECC-------
T ss_pred e-CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC-CCEEEEEeCCCeEEEEECCCCCEEEEEeC-------
Confidence 9 4557889999999999999988766 567788899999985 45789999999999999999998888753
Q ss_pred CCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCc--------ceeeee
Q 010296 391 LKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETK--------DIQPLY 462 (513)
Q Consensus 391 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~--------~~~~~~ 462 (513)
|...|.+++| ++.+|++|+.||.|++||+.++.. .+..+
T Consensus 335 ------------------------------h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~- 381 (435)
T 1p22_A 335 ------------------------------HEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL- 381 (435)
T ss_dssp ------------------------------CSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEE-
T ss_pred ------------------------------CcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeec-
Confidence 3344999998 678999999999999999976521 22233
Q ss_pred ecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 463 NLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 463 ~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
..|.+.|++++| ++.+|+++ +.||.|++|++.....
T Consensus 382 -~~h~~~v~~l~~--~~~~l~s~-s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 382 -VEHSGRVFRLQF--DEFQIVSS-SHDDTILIWDFLNDPA 417 (435)
T ss_dssp -CCCSSCCCCEEE--CSSCEEEC-CSSSEEEEEC------
T ss_pred -cCCCCCeEEEEe--CCCEEEEE-eCCCEEEEEECCCCCC
Confidence 247889999999 78888888 8999999999876643
No 72
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.3e-37 Score=339.21 Aligned_cols=319 Identities=18% Similarity=0.274 Sum_probs=263.8
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhc-------------cC--
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLK-------------SH-- 207 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-------------~~-- 207 (513)
+|+.........+.+|.+.|++++|+|++++|++|+.||+|++||+.++.....+........ ..
T Consensus 727 vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 806 (1249)
T 3sfz_A 727 LWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSW 806 (1249)
T ss_dssp EEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCB
T ss_pred EEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEE
Confidence 566677777888899999999999999999999999999999999988765443311000000 00
Q ss_pred ---------------------CCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeE
Q 010296 208 ---------------------GAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVS 266 (513)
Q Consensus 208 ---------------------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 266 (513)
..........+|...|.+++|+|++.++++++.+|.|++|++.++..+..+.+|...|.
T Consensus 807 s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~ 886 (1249)
T 3sfz_A 807 SADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVH 886 (1249)
T ss_dssp CTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceE
Confidence 00000001237888999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCeEEEEeCCCcEEEEeCC------------------------------------------------------
Q 010296 267 CLTFRQGTSELFSGSFDRTVKIWNAE------------------------------------------------------ 292 (513)
Q Consensus 267 ~~~~~~~~~~l~~~~~dg~i~iwd~~------------------------------------------------------ 292 (513)
+++|+|++++|++++.||.|++|++.
T Consensus 887 ~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 966 (1249)
T 3sfz_A 887 GVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSC 966 (1249)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEE
T ss_pred EEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEE
Confidence 99999999999999999999988743
Q ss_pred -------------------------CCceeEEeecccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeeeEEecCCCC
Q 010296 293 -------------------------DRAYISTLFGHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRLVFRAPASS 346 (513)
Q Consensus 293 -------------------------~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 346 (513)
+++.+..+.+|...|.+++|+|++ .+++++.|+.|++|++.++.......+...
T Consensus 967 ~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 1046 (1249)
T 3sfz_A 967 CCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQET 1046 (1249)
T ss_dssp EEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSC
T ss_pred EEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCc
Confidence 223334455688899999999987 566888999999999999988888889999
Q ss_pred eeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEE
Q 010296 347 LECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVS 426 (513)
Q Consensus 347 v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~ 426 (513)
+.++.+++++.+++++.||.|++||+.+++.+..+.. |...|+
T Consensus 1047 v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-------------------------------------~~~~v~ 1089 (1249)
T 3sfz_A 1047 VKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTC-------------------------------------HQGTVL 1089 (1249)
T ss_dssp EEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEEC-------------------------------------CSSCCC
T ss_pred EEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcc-------------------------------------cCCcEE
Confidence 9999999999999999999999999999988877753 333499
Q ss_pred EEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 427 SVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 427 ~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
+++|+|++++|++++.||.|++|++.++ ..+..+.. |.+.|++++|+|+|++|+++ +.||.|++|++..+..
T Consensus 1090 ~~~~s~d~~~l~s~s~d~~v~iwd~~~~-~~~~~l~~--h~~~v~~~~~s~dg~~lat~-~~dg~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1090 SCAISSDATKFSSTSADKTAKIWSFDLL-SPLHELKG--HNGCVRCSAFSLDGILLATG-DDNGEIRIWNVSDGQL 1161 (1249)
T ss_dssp CEEECSSSSSCEEECCSSCCCEECSSSS-SCSBCCCC--CSSCEEEEEECSSSSEEEEE-ETTSCCCEEESSSSCC
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCc-ceeeeecc--CCCcEEEEEECCCCCEEEEE-eCCCEEEEEECCCCce
Confidence 9999999999999999999999999887 34444433 78899999999999999999 8999999999887653
No 73
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.9e-36 Score=308.72 Aligned_cols=297 Identities=18% Similarity=0.238 Sum_probs=232.5
Q ss_pred ccCCCcccchhhhhccCC---CeEEEEECCC-CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCC-
Q 010296 143 VQKPEATDEFRVLLKHRQ---SVTAVALSED-DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRAT- 217 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~---~V~~~~~s~~-~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 217 (513)
+|+.........+.+|.. .|++++|+|+ +++|++++.||.|++||+.+++.+..+ ..
T Consensus 187 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~------------------~~~ 248 (615)
T 1pgu_A 187 FYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYI------------------EDD 248 (615)
T ss_dssp EEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEEC------------------CBT
T ss_pred EEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEe------------------ccc
Confidence 566677777888899999 9999999999 999999999999999999988876643 12
Q ss_pred --CCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCc----CCCeEEEEEecCCCeEEEEeCCCcEEEEeC
Q 010296 218 --KQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGH----RGPVSCLTFRQGTSELFSGSFDRTVKIWNA 291 (513)
Q Consensus 218 --~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 291 (513)
.|...|.+++|+ ++.+|++++.|+.|++||+.+++.+..+..+ ...+.++.|. ++.++++++.+|.|++||+
T Consensus 249 ~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~ 326 (615)
T 1pgu_A 249 QEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYEL 326 (615)
T ss_dssp TBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEET
T ss_pred ccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEEC
Confidence 788999999999 9999999999999999999999998888766 4678888886 8899999999999999999
Q ss_pred CCCceeEEeecccCCeEEEEe---------------------------------eCCCeEEEEeCCCcEEEEecC-----
Q 010296 292 EDRAYISTLFGHQSEVLTIDC---------------------------------LRKERVLTVGRDRSMQLWKVP----- 333 (513)
Q Consensus 292 ~~~~~~~~~~~~~~~v~~~~~---------------------------------~~~~~~~~~~~d~~i~iwd~~----- 333 (513)
.+++.+..+.+|...|.+++| .++..+++++.++.|++|++.
T Consensus 327 ~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~ 406 (615)
T 1pgu_A 327 GHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFG 406 (615)
T ss_dssp TEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECS
T ss_pred CCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCccc
Confidence 988887777766666655555 223345555555555555543
Q ss_pred ---------------------------------------------------------------------CCee--eEEec
Q 010296 334 ---------------------------------------------------------------------EESR--LVFRA 342 (513)
Q Consensus 334 ---------------------------------------------------------------------~~~~--~~~~~ 342 (513)
+... ..+..
T Consensus 407 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~ 486 (615)
T 1pgu_A 407 SQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP 486 (615)
T ss_dssp SCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSC
T ss_pred CCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCC
Confidence 2211 12233
Q ss_pred CCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCC
Q 010296 343 PASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSA 421 (513)
Q Consensus 343 ~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 421 (513)
|...+.+++|+|++. |++++.||.|++|++.+++++..+.. .|
T Consensus 487 ~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~------------------------------------~h 530 (615)
T 1pgu_A 487 LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWA------------------------------------FR 530 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSC------------------------------------CC
T ss_pred ccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeec------------------------------------CC
Confidence 455666777777664 55666777777777766666554421 15
Q ss_pred cceEEEEEEec----------CCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCc
Q 010296 422 YSWVSSVTVCG----------GSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPR 491 (513)
Q Consensus 422 ~~~i~~~~~s~----------~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~ 491 (513)
...|++++|+| ++++|++++.||.|+||++.++...+..+. .|...|++++|+|+++ |+++ +.||.
T Consensus 531 ~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~h~~~v~~l~~s~~~~-l~s~-~~d~~ 606 (615)
T 1pgu_A 531 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN--AHKDGVNNLLWETPST-LVSS-GADAC 606 (615)
T ss_dssp SSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETT--SSTTCEEEEEEEETTE-EEEE-ETTSC
T ss_pred CCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhh--cCccceEEEEEcCCCC-eEEe-cCCce
Confidence 55699999999 999999999999999999998744444443 3789999999999999 8888 99999
Q ss_pred ccccccCC
Q 010296 492 LGRWGHLP 499 (513)
Q Consensus 492 v~~W~~~~ 499 (513)
|++|++..
T Consensus 607 v~iw~~~~ 614 (615)
T 1pgu_A 607 IKRWNVVL 614 (615)
T ss_dssp EEEEEEC-
T ss_pred EEEEeeec
Confidence 99999764
No 74
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-36 Score=318.72 Aligned_cols=206 Identities=9% Similarity=0.134 Sum_probs=164.0
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCccc
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKH 222 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (513)
+|+......... ..|..+|++|+|+| +++|++++.|++|+|||+.+++.+..+ .|...
T Consensus 43 lw~~~~~~~~~~-~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~--------------------~~~~~ 100 (902)
T 2oaj_A 43 IYGQQQVEVVIK-LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTV--------------------FVPGK 100 (902)
T ss_dssp EECSTTCEEEEE-CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEE--------------------ECSSC
T ss_pred EEeCCCcEEEEE-cCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEE--------------------cCCCC
Confidence 344444333333 35889999999999 889999999999999999998876654 35578
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCccee-----------eeccCcCCCeEEEEEecC-CCeEEEEeCCCcEEEEe
Q 010296 223 ILALAVSSDGRYLASGGLDRHIHLWDTRIQEHI-----------QAFPGHRGPVSCLTFRQG-TSELFSGSFDRTVKIWN 290 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~-----------~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd 290 (513)
|++++|+|++++|++|+.||.|++||+.++++. ..+.+|.+.|.+++|+|+ +..|++|+.||.| +||
T Consensus 101 V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd 179 (902)
T 2oaj_A 101 ITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYS 179 (902)
T ss_dssp EEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEE
T ss_pred EEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEE
Confidence 999999999999999999999999999988754 345679999999999996 4689999999999 999
Q ss_pred CCCCceeEEeecc------------------cCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeeeEEe------c---
Q 010296 291 AEDRAYISTLFGH------------------QSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRLVFR------A--- 342 (513)
Q Consensus 291 ~~~~~~~~~~~~~------------------~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~------~--- 342 (513)
+++++++..+..| ...|.+++|+|++ .|++++.|+.|++||+++++.+... .
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~ 259 (902)
T 2oaj_A 180 LVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVP 259 (902)
T ss_dssp TTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSC
T ss_pred CCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCC
Confidence 9999988877655 4679999999998 4669999999999999887765421 1
Q ss_pred ----------CCCCeeEEEeec----CC-e-EEEEeCC-----CCEEEEe
Q 010296 343 ----------PASSLECCCFIS----ND-E-FLSGSDD-----GSIELWS 371 (513)
Q Consensus 343 ----------~~~~v~~~~~~~----~~-~-~~~~~~d-----g~i~iwd 371 (513)
+...|.+++|++ ++ . +++|+.+ ..+.+|+
T Consensus 260 ~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~ 309 (902)
T 2oaj_A 260 QPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMID 309 (902)
T ss_dssp CTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEE
T ss_pred CCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEe
Confidence 234688899853 32 3 4566554 2666776
No 75
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.2e-35 Score=290.30 Aligned_cols=284 Identities=23% Similarity=0.410 Sum_probs=240.8
Q ss_pred cchhhhhccCCCe-EEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE
Q 010296 150 DEFRVLLKHRQSV-TAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV 228 (513)
Q Consensus 150 ~~~~~~~~h~~~V-~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 228 (513)
...+.+.+|.+.| +| +++++++|++|+.||+|++||+.+++.+..+ .+|...|++++|
T Consensus 109 ~~~~~l~~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~-------------------~~h~~~v~~~~~ 167 (445)
T 2ovr_B 109 KSPKVLKGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-------------------VGHTGGVWSSQM 167 (445)
T ss_dssp CCCEEEECSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEEEEC-------------------CCCSSCEEEEEE
T ss_pred ceeEEecccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEEEEE-------------------cCCCCCEEEEEe
Confidence 3445688999875 55 4456899999999999999999998877654 689999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeE
Q 010296 229 SSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVL 308 (513)
Q Consensus 229 s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 308 (513)
+ +.+|++|+.||.|++||+.+++.+..+.+|...|.++.|+ +..|++++.||.|++||+.+++.+..+.+|...|.
T Consensus 168 ~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~ 243 (445)
T 2ovr_B 168 R--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 243 (445)
T ss_dssp E--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEE
T ss_pred c--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEE
Confidence 8 6799999999999999999999999999999999999996 56799999999999999999999999999999999
Q ss_pred EEEeeCCCeEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCc
Q 010296 309 TIDCLRKERVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPL 387 (513)
Q Consensus 309 ~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 387 (513)
++.+ ....+++++.|+.|++||+.+.... .+..|...+.++.+ ....+++++.||.|++||+.+++++..+..+
T Consensus 244 ~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--- 318 (445)
T 2ovr_B 244 CVQY-DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH--- 318 (445)
T ss_dssp EEEE-CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTCCEEEEECCC---
T ss_pred EEEE-CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEcCC---
Confidence 9999 4557889999999999999988766 56678889999999 3446889999999999999999988877532
Q ss_pred ccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeee-cCc
Q 010296 388 LDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYN-LPL 466 (513)
Q Consensus 388 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~-~~~ 466 (513)
...+.++.++ +++|++|+.||.|++||+.++ ..+..+.. ..|
T Consensus 319 ----------------------------------~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~ 361 (445)
T 2ovr_B 319 ----------------------------------QSLTSGMELK--DNILVSGNADSTVKIWDIKTG-QCLQTLQGPNKH 361 (445)
T ss_dssp ----------------------------------CSCEEEEEEE--TTEEEEEETTSCEEEEETTTC-CEEEEECSTTSC
T ss_pred ----------------------------------cccEEEEEEe--CCEEEEEeCCCeEEEEECCCC-cEEEEEccCCCC
Confidence 2337777765 569999999999999999887 33444432 237
Q ss_pred ccEEEEEEeecCCCEEEEEecCCCcccccccCCCccc
Q 010296 467 VGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAARN 503 (513)
Q Consensus 467 ~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~~ 503 (513)
...|++++|+ +.+|+++ +.||.|++|++..+...
T Consensus 362 ~~~v~~~~~~--~~~l~s~-~~dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 362 QSAVTCLQFN--KNFVITS-SDDGTVKLWDLKTGEFI 395 (445)
T ss_dssp SSCEEEEEEC--SSEEEEE-ETTSEEEEEETTTCCEE
T ss_pred CCCEEEEEEC--CCEEEEE-eCCCeEEEEECCCCcee
Confidence 7889999995 5788888 89999999998877543
No 76
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.7e-36 Score=277.37 Aligned_cols=249 Identities=19% Similarity=0.341 Sum_probs=212.9
Q ss_pred CCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCC
Q 010296 215 RATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDR 294 (513)
Q Consensus 215 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 294 (513)
.+.+|...|++++|+|++++|++|+.||.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++||+.++
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~ 97 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 97 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEeecccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEe
Q 010296 295 AYISTLFGHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE-FLSGSDDGSIELWS 371 (513)
Q Consensus 295 ~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd 371 (513)
+++..+.+|...|.++.|+|++ .+++++.|+.|++||+.++... .+..|...+.+++|+|++. |++++.||.|++||
T Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd 177 (312)
T 4ery_A 98 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 177 (312)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 9999999999999999999987 5668999999999999987765 5667888999999999985 78999999999999
Q ss_pred cCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEe
Q 010296 372 LLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAI 451 (513)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~ 451 (513)
+.+++.+..+...+ ...+..++|+|++++|++++.||.|++||+
T Consensus 178 ~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~ 221 (312)
T 4ery_A 178 TASGQCLKTLIDDD------------------------------------NPPVSFVKFSPNGKYILAATLDNTLKLWDY 221 (312)
T ss_dssp TTTCCEEEEECCSS------------------------------------CCCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred CCCCceeeEEeccC------------------------------------CCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 99998887764322 233899999999999999999999999999
Q ss_pred CCCCcceeeeeecCcccEEEEEEee-cCCCEEEEEecCCCcccccccCCCc
Q 010296 452 ESETKDIQPLYNLPLVGFVNSLAFA-KSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~v~~v~~s-p~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
.++ ..+..+.............|+ +++.+|+++ +.||.|++|++....
T Consensus 222 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg-~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 222 SKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSG-SEDNLVYIWNLQTKE 270 (312)
T ss_dssp TTT-EEEEEECSSCCSSSCCCEEEECSSSCEEEEC-CTTSCEEEEETTTCC
T ss_pred CCC-cEEEEEEecCCceEEEEEEEEeCCCcEEEEE-CCCCEEEEEECCCch
Confidence 887 333333332111112223344 678888888 999999999987654
No 77
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.3e-37 Score=286.62 Aligned_cols=245 Identities=21% Similarity=0.307 Sum_probs=200.3
Q ss_pred CCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcc--eeeeccCcCCCeEEEEEec--CCCeEEEEeCCCcEEEEeC
Q 010296 216 ATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQE--HIQAFPGHRGPVSCLTFRQ--GTSELFSGSFDRTVKIWNA 291 (513)
Q Consensus 216 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~ 291 (513)
+.+|...|++++|+|+|++||+|+.|++|+|||+.++. .+..+.+|...|++++|++ ++++|++|+.|++|++||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 46899999999999999999999999999999998764 4678899999999999976 4889999999999999999
Q ss_pred CCCc--eeEEeecccCCeEEEEeeCC--C-eEEEEeCCCcEEEEecCCCee----eEEecCCCCeeEEEeecC-------
Q 010296 292 EDRA--YISTLFGHQSEVLTIDCLRK--E-RVLTVGRDRSMQLWKVPEESR----LVFRAPASSLECCCFISN------- 355 (513)
Q Consensus 292 ~~~~--~~~~~~~~~~~v~~~~~~~~--~-~~~~~~~d~~i~iwd~~~~~~----~~~~~~~~~v~~~~~~~~------- 355 (513)
+++. .+..+.+|...|.+++|+|+ + .+++++.|+.|++|++..... ..+..|...+.+++|+|+
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 8874 56677889999999999996 4 577899999999999987632 234567778999999986
Q ss_pred -----------CeEEEEeCCCCEEEEecCCCC---eeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCC
Q 010296 356 -----------DEFLSGSDDGSIELWSLLRKK---PVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSA 421 (513)
Q Consensus 356 -----------~~~~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 421 (513)
..|++|+.|++|+|||+.... ++..+ ..|
T Consensus 169 ~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l-------------------------------------~~h 211 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL-------------------------------------EAH 211 (316)
T ss_dssp --CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC-------------------------------------BCC
T ss_pred ccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec-------------------------------------ccC
Confidence 258899999999999997553 22222 345
Q ss_pred cceEEEEEEecCC----CEEEEecCCCcEEEEEeCCCC---cceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccc
Q 010296 422 YSWVSSVTVCGGS----DLAASGAGNGSVRLWAIESET---KDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGR 494 (513)
Q Consensus 422 ~~~i~~~~~s~~~----~~l~~g~~dg~v~vwd~~~~~---~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~ 494 (513)
..+|.+++|+|++ .+|++|+.||+|+||++.+.. .....+.. |...|.+++|+|++++|+++ +.|+.|++
T Consensus 212 ~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~--~~~~v~~v~~sp~g~~las~-~~D~~v~l 288 (316)
T 3bg1_A 212 SDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHK--FNDVVWHVSWSITANILAVS-GGDNKVTL 288 (316)
T ss_dssp SSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEE--CSSCEEEEEECTTTCCEEEE-ESSSCEEE
T ss_pred CCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhc--CCCcEEEEEEcCCCCEEEEE-cCCCeEEE
Confidence 5669999999986 899999999999999997631 11222332 67889999999999999999 89999999
Q ss_pred cccCCC
Q 010296 495 WGHLPA 500 (513)
Q Consensus 495 W~~~~~ 500 (513)
|+....
T Consensus 289 w~~~~~ 294 (316)
T 3bg1_A 289 WKESVD 294 (316)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 987543
No 78
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-37 Score=306.27 Aligned_cols=301 Identities=10% Similarity=0.008 Sum_probs=221.3
Q ss_pred hhhhccCCCeEEEEECCC------CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEE
Q 010296 153 RVLLKHRQSVTAVALSED------DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILAL 226 (513)
Q Consensus 153 ~~~~~h~~~V~~~~~s~~------~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 226 (513)
..+.+|.+.|++|+|+|+ +.+||+|+.||+|+||++.++...... ......+...+.+|...|+++
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~--------~~~~~~p~~~l~~h~~~v~sv 272 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV--------FKMCEKPSLTLSLADSLITTF 272 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE--------EECCCSCSEEECCTTTCEEEE
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc--------ceeecCceEEEEcCCCCEEEE
Confidence 346678999999999997 579999999999999999876532100 000011222356788999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCcc-eeeeccCcCCCeEEE--EEecCC-CeEEEEeCCCcEEEEeCCCCceeEEeec
Q 010296 227 AVSSDGRYLASGGLDRHIHLWDTRIQE-HIQAFPGHRGPVSCL--TFRQGT-SELFSGSFDRTVKIWNAEDRAYISTLFG 302 (513)
Q Consensus 227 ~~s~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 302 (513)
+|+++ ..|++|+.||+|++||+.++. +...+.+|...|.++ +|+|++ .+|++++.|++|+|||+++++++..+.+
T Consensus 273 ~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~ 351 (524)
T 2j04_B 273 DFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVS 351 (524)
T ss_dssp EESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEE
T ss_pred EecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccc
Confidence 99986 489999999999999999764 455688999999999 568887 8899999999999999999888777776
Q ss_pred ccC--CeEEEEeeCCC-eEEEEeCCCcEEEEecCCCee-eEEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCe
Q 010296 303 HQS--EVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESR-LVFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKP 377 (513)
Q Consensus 303 ~~~--~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~-~~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~ 377 (513)
|.. .|.+++|+|++ .+++++.|++|++||++.... ..+.+|...|.+++|+|++. |++|+.||+|+||++... .
T Consensus 352 ~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~ 430 (524)
T 2j04_B 352 RFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-L 430 (524)
T ss_dssp ECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-T
T ss_pred ccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-h
Confidence 654 58899999977 566888999999999998765 46778999999999999986 889999999999997543 1
Q ss_pred eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcc
Q 010296 378 VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKD 457 (513)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~ 457 (513)
+........ ..+...|.+++|+|++..+.. .. .+++|........
T Consensus 431 ~~~~~~~~~--------------------------------~~~~~~v~~v~~sp~g~~~~~-~~--~~~~~~~~~~g~~ 475 (524)
T 2j04_B 431 LHGIKNSSA--------------------------------TQKSLRLWKWDYSIKDDKYRI-DS--SYEVYPLTVNDVS 475 (524)
T ss_dssp TTCC--------------------------------------CCCCEEEECBCCSSSCEEEE-CC--CCCCCC-------
T ss_pred ccccccCcc--------------------------------ceeeeEEEEeccCCCCCeEEc-cC--CceecccccCCcc
Confidence 111000000 011123789999999985532 22 2334443311123
Q ss_pred eeeeeecCcccEEEEEEeecCCC---EEEEEecCCCcccccccCCCc
Q 010296 458 IQPLYNLPLVGFVNSLAFAKSGQ---FLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 458 ~~~~~~~~~~~~v~~v~~sp~~~---~l~~~~~~dg~v~~W~~~~~~ 501 (513)
+..+. .|...|++|+|+|+++ +||+| +.+|.|+||++....
T Consensus 476 ~~~l~--gh~~~V~~Vafsp~~~~~~~lAsg-~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 476 KAKID--AHGINITCTKWNETSAGGKCYAFS-NSAGLLTLEYLSLEH 519 (524)
T ss_dssp --------CCCSCCCEEECCSTTTTTEEEEE-CTTSEEEEEECSCC-
T ss_pred eeeec--CCCceEEEEECCCCCCccHHHHhh-ccCceEEEEEccccc
Confidence 33343 3788999999999965 78887 899999999976553
No 79
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.1e-36 Score=290.47 Aligned_cols=288 Identities=16% Similarity=0.216 Sum_probs=235.4
Q ss_pred CCeEEEEECCCCCeEE-EEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC-CCCEEEE
Q 010296 160 QSVTAVALSEDDSKGF-SASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS-DGRYLAS 237 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~-t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s 237 (513)
.....++++|+...++ +++.||.|+||++........ ....+.+|...|++++|+| ++.+|++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~---------------~~~~~~~h~~~V~~~~~~p~~~~~l~s 99 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDK---------------NVPLVCGHTAPVLDIAWCPHNDNVIAS 99 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCT---------------TCCCBCCCSSCEEEEEECTTCTTEEEE
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCC---------------CCceEecCCCCEEEEEeCCCCCCEEEE
Confidence 4456789999876554 578899999999965432210 1123568999999999999 9999999
Q ss_pred EeCCCcEEEEeCCCc-------ceeeeccCcCCCeEEEEEecCC-CeEEEEeCCCcEEEEeCCCCceeEEe--ecccCCe
Q 010296 238 GGLDRHIHLWDTRIQ-------EHIQAFPGHRGPVSCLTFRQGT-SELFSGSFDRTVKIWNAEDRAYISTL--FGHQSEV 307 (513)
Q Consensus 238 ~~~dg~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v 307 (513)
|+.||.|+||++.++ +.+..+.+|...|.+++|+|++ .+|++++.||.|++||+.+++.+..+ ..|...|
T Consensus 100 ~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v 179 (402)
T 2aq5_A 100 GSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTI 179 (402)
T ss_dssp EETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCE
T ss_pred EeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCce
Confidence 999999999999987 5678888999999999999998 68999999999999999999999988 7899999
Q ss_pred EEEEeeCCC-eEEEEeCCCcEEEEecCCCeeeEE--ecCCCC-eeEEEeecCCeEE-EE---eCCCCEEEEecCCCCe-e
Q 010296 308 LTIDCLRKE-RVLTVGRDRSMQLWKVPEESRLVF--RAPASS-LECCCFISNDEFL-SG---SDDGSIELWSLLRKKP-V 378 (513)
Q Consensus 308 ~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~--~~~~~~-v~~~~~~~~~~~~-~~---~~dg~i~iwd~~~~~~-~ 378 (513)
.+++|+|++ .+++++.|+.|++||++++..... ..|... +.++.|+|++.++ +| +.++.|++||+.+++. +
T Consensus 180 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~ 259 (402)
T 2aq5_A 180 YSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPL 259 (402)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCS
T ss_pred EEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCc
Confidence 999999987 566899999999999998877643 455554 8999999999854 56 5899999999988764 3
Q ss_pred EEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEE-EecCCCcEEEEEeCCCCcc
Q 010296 379 YIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAA-SGAGNGSVRLWAIESETKD 457 (513)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~g~~dg~v~vwd~~~~~~~ 457 (513)
..... .+...+.+++|+|++++|+ +|+.||.|++|++.++...
T Consensus 260 ~~~~~------------------------------------~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~ 303 (402)
T 2aq5_A 260 SLQEL------------------------------------DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF 303 (402)
T ss_dssp EEEEC------------------------------------CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC
T ss_pred eEEec------------------------------------cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc
Confidence 33321 1223389999999999986 5668999999999988444
Q ss_pred eeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCc
Q 010296 458 IQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 458 ~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
+..+..+.+..+|.+++|+|++.++++ .++.+++|++..+.
T Consensus 304 ~~~l~~~~~~~~v~~~~~sp~~~~~~s---~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 304 LHYLSMFSSKESQRGMGYMPKRGLEVN---KCEIARFYKLHERK 344 (402)
T ss_dssp EEEEEEECCSSCCSEEEECCGGGSCGG---GTEEEEEEEEETTE
T ss_pred eEeecccccCCcccceEEeccccccee---cceeEEEEEcCCCc
Confidence 666666667799999999999998764 35599999987754
No 80
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.3e-36 Score=283.41 Aligned_cols=294 Identities=14% Similarity=0.182 Sum_probs=214.6
Q ss_pred hhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC--
Q 010296 153 RVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS-- 230 (513)
Q Consensus 153 ~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-- 230 (513)
..+.+|.+.|++|+|+|++++|++|+.||.|+||++.++.....+ ...+.+|...|++++|+|
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~---------------~~~~~~~~~~v~~~~~~~~~ 69 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWEL---------------SDSWRAHDSSIVAIDWASPE 69 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEE---------------EEEEECCSSCEEEEEECCGG
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCccee---------------cceeccCCCcEEEEEEcCCC
Confidence 456799999999999999999999999999999999876432111 012357899999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCc---------ceeeeccCcCCCeEEEEEecC--CCeEEEEeCCCcEEEEeCCCCceeEE
Q 010296 231 DGRYLASGGLDRHIHLWDTRIQ---------EHIQAFPGHRGPVSCLTFRQG--TSELFSGSFDRTVKIWNAEDRAYIST 299 (513)
Q Consensus 231 ~~~~l~s~~~dg~i~vwd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~ 299 (513)
++.+|++|+.||.|++||+.++ +.+..+..|...|.+++|+|+ +.+|++++.||.|++||+++++.+..
T Consensus 70 d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 149 (351)
T 3f3f_A 70 YGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRS 149 (351)
T ss_dssp GCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTC
T ss_pred CCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcc
Confidence 6999999999999999999877 557788889999999999999 99999999999999999998775543
Q ss_pred ee-------------cccCCeEEEEeeCC---C-eEEEEeCCCcEEEEecCCCee---eEEecCCCCeeEEEeecCC---
Q 010296 300 LF-------------GHQSEVLTIDCLRK---E-RVLTVGRDRSMQLWKVPEESR---LVFRAPASSLECCCFISND--- 356 (513)
Q Consensus 300 ~~-------------~~~~~v~~~~~~~~---~-~~~~~~~d~~i~iwd~~~~~~---~~~~~~~~~v~~~~~~~~~--- 356 (513)
+. .|...+.++.|+|+ + .+++++.++.+.+|+...... ..+..|...|.+++|+|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~ 229 (351)
T 3f3f_A 150 WTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRW 229 (351)
T ss_dssp CEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCS
T ss_pred ccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCc
Confidence 32 57788999999995 4 667899999998888777654 2456788899999999997
Q ss_pred --eEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCC
Q 010296 357 --EFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGS 434 (513)
Q Consensus 357 --~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 434 (513)
.|++++.||.|++||+..+.......... ..+....+++..
T Consensus 230 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~ 272 (351)
T 3f3f_A 230 YQLIATGCKDGRIRIFKITEKLSPLASEESL-------------------------------------TNSNMFDNSADV 272 (351)
T ss_dssp SEEEEEEETTSCEEEEEEEECC----------------------------------------------------------
T ss_pred ceEEEEEcCCCeEEEEeCCCCcCccccCCcc-------------------------------------cceeccCCCccc
Confidence 48899999999999998765443322111 012223333333
Q ss_pred CEEEEec----CCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 435 DLAASGA----GNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 435 ~~l~~g~----~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
..++.+. ....+.+|+.... ..+..+. .|...|++++|+|++++|+++ +.||.|++|++..+..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~h~~~v~~~~~s~~~~~l~s~-~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 273 DMDAQGRSDSNTEEKAELQSNLQV-ELLSEHD--DHNGEVWSVSWNLTGTILSSA-GDDGKVRLWKATYSNE 340 (351)
T ss_dssp ------------------CCSEEE-EEEEEEC--TTSSCEEEEEECSSSCCEEEE-ETTSCEEEEEECTTSC
T ss_pred ccccccccccccceeeeecccccc-cEEEEEe--cccccEEEEEEcCCCCEEEEe-cCCCcEEEEecCcCcc
Confidence 3333333 3344455544332 2222222 378899999999999999999 8999999999987654
No 81
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.8e-36 Score=315.31 Aligned_cols=326 Identities=18% Similarity=0.242 Sum_probs=257.2
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCccc
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKH 222 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (513)
+|+......+..+.+|.++|++++|+|++++|++|+.||.|+||++.+++.+..+ .+|...
T Consensus 39 iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~-------------------~~~~~~ 99 (814)
T 3mkq_A 39 IWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF-------------------EAHPDY 99 (814)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE-------------------ECCSSC
T ss_pred EEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE-------------------ecCCCC
Confidence 5666777788889999999999999999999999999999999999998877654 578999
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-ceeeeccCcCCCeEEEEEec-CCCeEEEEeCCCcEEEEeCCCCceeEEe
Q 010296 223 ILALAVSSDGRYLASGGLDRHIHLWDTRIQ-EHIQAFPGHRGPVSCLTFRQ-GTSELFSGSFDRTVKIWNAEDRAYISTL 300 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 300 (513)
|++++|+|++++|++++.||.|++|++.++ .....+.+|...|.+++|+| ++..|++++.||.|++||+.++.....+
T Consensus 100 v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 179 (814)
T 3mkq_A 100 IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL 179 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEE
T ss_pred EEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEE
Confidence 999999999999999999999999999887 67788889999999999999 8889999999999999999988877777
Q ss_pred eccc-CCeEEEEeeC--CC-eEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCC
Q 010296 301 FGHQ-SEVLTIDCLR--KE-RVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLR 374 (513)
Q Consensus 301 ~~~~-~~v~~~~~~~--~~-~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~ 374 (513)
..+. ..+.+++|+| ++ .+++++.++.|++|++.++... .+..|...+.+++|+|++. +++++.||.|++||+.+
T Consensus 180 ~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 180 TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (814)
T ss_dssp ECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred ecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 6555 8899999998 66 5668889999999999988766 5667888999999999985 78999999999999999
Q ss_pred CCeeEEeecCCCcccCCCCcccCcCc----------cccccC----------CCCC------------------------
Q 010296 375 KKPVYIVKNAHPLLDGLKNFEQDEGK----------ISNGHS----------ENGN------------------------ 410 (513)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------i~~~~~----------~~~~------------------------ 410 (513)
++.+..+.........+. +.+++.. +..+.. +.+.
T Consensus 260 ~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (814)
T 3mkq_A 260 YKVEKTLNVGLERSWCIA-THPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEE 338 (814)
T ss_dssp CSEEEEECCSSSSEEEEE-ECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCC
T ss_pred CcEEEEeecCCCcEEEEE-EccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccc
Confidence 988887765432221111 1111110 000000 0000
Q ss_pred ------CCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEE
Q 010296 411 ------LNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIA 484 (513)
Q Consensus 411 ------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~ 484 (513)
..........+...+.+++|+|+|++|++++ +|.+.+|++... .. .+.+.|.+++|+|++++|++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~----~~----~~~~~i~~~~~spdg~~la~ 409 (814)
T 3mkq_A 339 VEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAW----RN----KAFGKCQDFVWGPDSNSYAL 409 (814)
T ss_dssp CCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTT----EE----EEEEECSEEEECTTSSCEEE
T ss_pred cccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECccc----cc----cCCCceEEEEEeCCCCeEEE
Confidence 0000000123344689999999999999998 899999997543 11 13466888999999998888
Q ss_pred EecCCCcccccccC
Q 010296 485 GVGQEPRLGRWGHL 498 (513)
Q Consensus 485 ~~~~dg~v~~W~~~ 498 (513)
+ +.+|.|++|+..
T Consensus 410 ~-~~~g~v~l~~~~ 422 (814)
T 3mkq_A 410 I-DETGQIKYYKNF 422 (814)
T ss_dssp E-CTTCCEEEEETT
T ss_pred E-eCCCcEEEEECC
Confidence 8 788889888644
No 82
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.2e-36 Score=307.35 Aligned_cols=265 Identities=29% Similarity=0.446 Sum_probs=218.7
Q ss_pred chhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC
Q 010296 151 EFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS 230 (513)
Q Consensus 151 ~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 230 (513)
..+.+.+|...|++++|+|++++|++|+.||+|+|||+.++.....+ .+|...|++++|+|
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~-------------------~~h~~~v~~~~~s~ 482 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRF-------------------VGHTKDVLSVAFSL 482 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-------------------ECCSSCEEEEEECT
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEE-------------------eCCCCCEEEEEEeC
Confidence 34568899999999999999999999999999999999998776644 68999999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCcceeee---ccCcCCCeEEEEEecCC--CeEEEEeCCCcEEEEeCCCCceeEEeecccC
Q 010296 231 DGRYLASGGLDRHIHLWDTRIQEHIQA---FPGHRGPVSCLTFRQGT--SELFSGSFDRTVKIWNAEDRAYISTLFGHQS 305 (513)
Q Consensus 231 ~~~~l~s~~~dg~i~vwd~~~~~~~~~---~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 305 (513)
++++|++|+.|++|++||+........ ..+|...|.+++|+|++ ..|++++.|++|++||++++++...+.+|..
T Consensus 483 ~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~ 562 (694)
T 3dm0_A 483 DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTG 562 (694)
T ss_dssp TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCC
Confidence 999999999999999999865543322 24688999999999987 5799999999999999999999999999999
Q ss_pred CeEEEEeeCCCe-EEEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecC
Q 010296 306 EVLTIDCLRKER-VLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNA 384 (513)
Q Consensus 306 ~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~ 384 (513)
.|.+++|+|++. +++++.|+.|++||+.++..+....+...+.+++|+|++.+++++.++.|+|||+.++..+..+...
T Consensus 563 ~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~ 642 (694)
T 3dm0_A 563 YVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVD 642 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC
T ss_pred CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccc
Confidence 999999999885 5589999999999999998876666778899999999999887788888999999999988877643
Q ss_pred CCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeC
Q 010296 385 HPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIE 452 (513)
Q Consensus 385 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~ 452 (513)
......... ..+ ......+...+++++|+|+|++|++|+.||.|+||++.
T Consensus 643 ~~~~~~~~~-------------~~~-----~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 643 LKAEAEKAD-------------NSG-----PAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CC----------------------------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ccccccccc-------------ccc-----cccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 221100000 000 00001122348999999999999999999999999985
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.6e-35 Score=283.77 Aligned_cols=257 Identities=20% Similarity=0.291 Sum_probs=219.5
Q ss_pred ccCCCcccchhhhhc-cCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcc
Q 010296 143 VQKPEATDEFRVLLK-HRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSK 221 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~-h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (513)
+|+.........+.. |...|++++|+|++++|++|+.||.|++|++.+++.+..+ .+|..
T Consensus 117 lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------------------~~~~~ 177 (401)
T 4aez_A 117 VWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTM-------------------AGHQA 177 (401)
T ss_dssp EEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-------------------CCCSS
T ss_pred EeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEe-------------------cCCCC
Confidence 455555555555544 8999999999999999999999999999999998877654 57899
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCC-CcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEe
Q 010296 222 HILALAVSSDGRYLASGGLDRHIHLWDTR-IQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTL 300 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 300 (513)
.|.+++|+ +.+|++|+.||.|++||+. ....+..+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+
T Consensus 178 ~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 255 (401)
T 4aez_A 178 RVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTK 255 (401)
T ss_dssp CEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEE
T ss_pred ceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEe
Confidence 99999995 6799999999999999998 56678888899999999999999999999999999999999999999999
Q ss_pred ecccCCeEEEEeeCCC-eEE-EEe--CCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEE--EeCCCCEEEEecC
Q 010296 301 FGHQSEVLTIDCLRKE-RVL-TVG--RDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLS--GSDDGSIELWSLL 373 (513)
Q Consensus 301 ~~~~~~v~~~~~~~~~-~~~-~~~--~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~--~~~dg~i~iwd~~ 373 (513)
..|...|.+++|+|++ .++ +++ .|+.|++||+.++.......+...+.+++|+|++. +++ |+.+|.|++|++.
T Consensus 256 ~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 256 TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEE
T ss_pred cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecC
Confidence 9999999999999965 555 443 69999999999988887667888999999999986 555 4489999999999
Q ss_pred CCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCC
Q 010296 374 RKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIES 453 (513)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~ 453 (513)
++........ ..|...|.+++|+|++++|++++.||.|++|++.+
T Consensus 336 ~~~~~~~~~~-----------------------------------~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 336 SSGLTKQVDI-----------------------------------PAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp TTEEEEEEEE-----------------------------------ECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred CccceeEEEe-----------------------------------cCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 8766554431 23344599999999999999999999999999998
Q ss_pred CC
Q 010296 454 ET 455 (513)
Q Consensus 454 ~~ 455 (513)
+.
T Consensus 381 ~~ 382 (401)
T 4aez_A 381 GD 382 (401)
T ss_dssp --
T ss_pred Cc
Confidence 73
No 84
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-35 Score=280.02 Aligned_cols=252 Identities=19% Similarity=0.340 Sum_probs=212.9
Q ss_pred CCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCC--CcceeeeccCcCCCeEEEEEecC--CCeEEEEeCCCcEEEEe
Q 010296 215 RATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTR--IQEHIQAFPGHRGPVSCLTFRQG--TSELFSGSFDRTVKIWN 290 (513)
Q Consensus 215 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd 290 (513)
.+.+|...|++++|+|++++|++|+.||.|+||++. +++.+..+.+|...|++++|+++ +.+|++++.||.|++||
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 85 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence 457899999999999999999999999999999998 66778889999999999999977 89999999999999999
Q ss_pred CCCCc--eeEEeecccCCeEEEEeeCC--C-eEEEEeCCCcEEEEecCCCe---eeEEecCCCCeeEEEeec--------
Q 010296 291 AEDRA--YISTLFGHQSEVLTIDCLRK--E-RVLTVGRDRSMQLWKVPEES---RLVFRAPASSLECCCFIS-------- 354 (513)
Q Consensus 291 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~-~~~~~~~d~~i~iwd~~~~~---~~~~~~~~~~v~~~~~~~-------- 354 (513)
+.+++ .+..+..|...|.+++|+|+ + .+++++.|+.|++||+.... ...+..|...+.+++|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC------
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccc
Confidence 99987 67778889999999999997 5 56799999999999998763 346678889999999999
Q ss_pred -----CC-eEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEE
Q 010296 355 -----ND-EFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSV 428 (513)
Q Consensus 355 -----~~-~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~ 428 (513)
++ .+++++.||.|++||++++.....+.... ..|...|+++
T Consensus 166 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------------------------------~~h~~~v~~~ 212 (379)
T 3jrp_A 166 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL---------------------------------EGHSDWVRDV 212 (379)
T ss_dssp ----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEE---------------------------------CCCSSCEEEE
T ss_pred ccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEE---------------------------------ecccCcEeEE
Confidence 35 58899999999999998776433221100 3344559999
Q ss_pred EEecC---CCEEEEecCCCcEEEEEeCCCCcce--eeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 429 TVCGG---SDLAASGAGNGSVRLWAIESETKDI--QPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 429 ~~s~~---~~~l~~g~~dg~v~vwd~~~~~~~~--~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
+|+|+ +.+|++++.||.|+||++.++.... ..+....+...|++++|+|++++|+++ +.||.|++|++...
T Consensus 213 ~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 213 AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS-GGDNKVTLWKENLE 288 (379)
T ss_dssp EECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEE-ESSSSEEEEEEEET
T ss_pred EECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEe-cCCCcEEEEeCCCC
Confidence 99999 8999999999999999998863222 222223378889999999999999999 78999999998743
No 85
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=5.3e-35 Score=276.23 Aligned_cols=292 Identities=10% Similarity=0.103 Sum_probs=217.1
Q ss_pred CCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEE
Q 010296 146 PEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILA 225 (513)
Q Consensus 146 ~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 225 (513)
.....++..+.+|...|++++|+|+|++|++|+.++ ++||++.++...... +...+..
T Consensus 6 ~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~---------------------~~~~~~~ 63 (355)
T 3vu4_A 6 MITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ---------------------EMRHLSK 63 (355)
T ss_dssp -------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE---------------------ECSCCCE
T ss_pred ccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee---------------------ecCCeEE
Confidence 334455566789999999999999999999998775 789998876554321 1224778
Q ss_pred EEEcCCCCEE-EEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCC-ceeEEeecc
Q 010296 226 LAVSSDGRYL-ASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDR-AYISTLFGH 303 (513)
Q Consensus 226 ~~~s~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~ 303 (513)
+++.++++.+ ++++.+++|++||+.+++.+..+. |...|.+++|+++. ++++ .++.|++||+.++ +.+..+..
T Consensus 64 ~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~- 138 (355)
T 3vu4_A 64 VRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR- 138 (355)
T ss_dssp EEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE-
T ss_pred EEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc-
Confidence 8899988877 567778999999999999998887 67799999998764 4444 4789999999988 66666654
Q ss_pred cCCeEEEEeeCCCeEEE--EeCCCcEEEEecCCCe-----------------eeEEecCCCCeeEEEeecCCe-EEEEeC
Q 010296 304 QSEVLTIDCLRKERVLT--VGRDRSMQLWKVPEES-----------------RLVFRAPASSLECCCFISNDE-FLSGSD 363 (513)
Q Consensus 304 ~~~v~~~~~~~~~~~~~--~~~d~~i~iwd~~~~~-----------------~~~~~~~~~~v~~~~~~~~~~-~~~~~~ 363 (513)
+...+++++ ..+++ ++.+|.|++||+.++. ...+..|...|.+++|+|++. |++++.
T Consensus 139 --~~~~~~~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~ 215 (355)
T 3vu4_A 139 --FGGVCEFSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQ 215 (355)
T ss_dssp --EEEEEEEET-TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred --CCceEEEEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeC
Confidence 334455566 55554 4689999999998765 457788999999999999986 789999
Q ss_pred CCC-EEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecC
Q 010296 364 DGS-IELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAG 442 (513)
Q Consensus 364 dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~ 442 (513)
|++ |+|||+.+++++..+... .|...|++++|+|++++|++++.
T Consensus 216 d~~~v~iwd~~~~~~~~~~~~g-----------------------------------~h~~~v~~~~~s~~~~~l~s~s~ 260 (355)
T 3vu4_A 216 DGTIIRVFKTEDGVLVREFRRG-----------------------------------LDRADVVDMKWSTDGSKLAVVSD 260 (355)
T ss_dssp TCSEEEEEETTTCCEEEEEECT-----------------------------------TCCSCEEEEEECTTSCEEEEEET
T ss_pred CCCEEEEEECCCCcEEEEEEcC-----------------------------------CCCCcEEEEEECCCCCEEEEEEC
Confidence 999 999999999999888621 13344999999999999999999
Q ss_pred CCcEEEEEeCCCCcce-eeeee-----------------cC--cccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 443 NGSVRLWAIESETKDI-QPLYN-----------------LP--LVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 443 dg~v~vwd~~~~~~~~-~~~~~-----------------~~--~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
|++|+|||+....... ..+.. ++ .......++|+|++++|+++ +.||.+++|++..+..
T Consensus 261 d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~-~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 261 KWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVW-PHTRMIETFKVVFDDE 339 (355)
T ss_dssp TCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEE-TTTTEEEEEEEEEETT
T ss_pred CCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEE-eCCCeEEEEEEEcCCC
Confidence 9999999997652111 11000 00 12234678999999999999 7899999999876554
Q ss_pred c
Q 010296 503 N 503 (513)
Q Consensus 503 ~ 503 (513)
.
T Consensus 340 ~ 340 (355)
T 3vu4_A 340 M 340 (355)
T ss_dssp T
T ss_pred C
Confidence 3
No 86
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.1e-34 Score=271.09 Aligned_cols=259 Identities=25% Similarity=0.389 Sum_probs=222.4
Q ss_pred cchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEc
Q 010296 150 DEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVS 229 (513)
Q Consensus 150 ~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 229 (513)
.+.+.+.+|...|++++|+|++++|++|+.|+.|++|+.......... ..+...+..+.++
T Consensus 77 ~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~ 137 (340)
T 4aow_A 77 IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-------------------VGHTKDVLSVAFS 137 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-------------------ECCSSCEEEEEEC
T ss_pred eeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeee-------------------cCCCCceeEEEEe
Confidence 456778899999999999999999999999999999999887765543 4567778999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCcce-eeeccCcCCCeEEEEEecCC--CeEEEEeCCCcEEEEeCCCCceeEEeecccCC
Q 010296 230 SDGRYLASGGLDRHIHLWDTRIQEH-IQAFPGHRGPVSCLTFRQGT--SELFSGSFDRTVKIWNAEDRAYISTLFGHQSE 306 (513)
Q Consensus 230 ~~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 306 (513)
+++.+|++|+.|+.+++||+..... ...+.+|...+.+++|++++ .++++++.|+.|++||+.+++.+..+.+|...
T Consensus 138 ~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~ 217 (340)
T 4aow_A 138 SDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY 217 (340)
T ss_dssp TTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred ecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCc
Confidence 9999999999999999999876544 44567799999999998865 46789999999999999999999999999999
Q ss_pred eEEEEeeCCCe-EEEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCC
Q 010296 307 VLTIDCLRKER-VLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAH 385 (513)
Q Consensus 307 v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~ 385 (513)
|.+++|+|++. +++++.|+.|++||+.+...+....+...+.+++|+|++.+++++.|+.|++||+.++..+..+....
T Consensus 218 v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~ 297 (340)
T 4aow_A 218 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 297 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccc
Confidence 99999999874 55899999999999999988877777789999999999999999999999999999988877765322
Q ss_pred CcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCC
Q 010296 386 PLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESET 455 (513)
Q Consensus 386 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~ 455 (513)
.. .....|...|++++|+|++++|++|+.||.|+|||+.+++
T Consensus 298 ~~----------------------------~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 298 IS----------------------------TSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ----------------------------------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ee----------------------------eeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 11 0114566679999999999999999999999999999873
No 87
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-34 Score=277.22 Aligned_cols=307 Identities=9% Similarity=0.084 Sum_probs=227.2
Q ss_pred ccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccc---------cCCChhhhccCCC---CCCCCCCCCCcccEE
Q 010296 157 KHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKY---------LWPSEEVLKSHGA---KDPQGRATKQSKHIL 224 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~---------~~~~~~~~~~~~~---~~~~~~~~~~~~~v~ 224 (513)
.-...|.+++|+|||+++||++.|++|+ +...+..+.. +.|.. ....... .........|...|+
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg-~~~~~~~~~~~~~~~~~~~~~~~V~ 89 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLE-FENKLDFELAQQNGLLNSQPVCYPR 89 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCC-CCCTTTTSCCCSSCSSTTSCSCCEE
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCC-CcceEEEEeCCCceEeecCCCCcEE
Confidence 4468899999999999999999999998 6555443310 00000 0000001 111111225688899
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCC-----CeEEEEEecCCCeEEEEeCCCcEEEEeCCCCce---
Q 010296 225 ALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRG-----PVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAY--- 296 (513)
Q Consensus 225 ~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--- 296 (513)
+++|||+|.+||+++.||.|++|+..+ ++..+. |.. .|.+++|+|+|++|++|+.||+|+||++.++..
T Consensus 90 ~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~ 166 (588)
T 2j04_A 90 VCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTP 166 (588)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCC
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccc
Confidence 999999999999999999999999654 666667 665 499999999999999999999999999998753
Q ss_pred ----eEEe----ecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeee----EE-ecCCCCeeEEEeecCCeEEEEeC
Q 010296 297 ----ISTL----FGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRL----VF-RAPASSLECCCFISNDEFLSGSD 363 (513)
Q Consensus 297 ----~~~~----~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~----~~-~~~~~~v~~~~~~~~~~~~~~~~ 363 (513)
+.++ .+|...|.+++|+|++ +++++.|++|++|++.++... .+ ..|...|.+++|+ ++.+++++
T Consensus 167 ~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g~~LASa~- 243 (588)
T 2j04_A 167 EFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-DYKVVLTC- 243 (588)
T ss_dssp CCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-TTEEEEEC-
T ss_pred cceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-CCEEEEEe-
Confidence 5665 5677899999999999 999999999999999887742 23 3677899999999 55677776
Q ss_pred CCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEE--ecCCCEEEEec
Q 010296 364 DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTV--CGGSDLAASGA 441 (513)
Q Consensus 364 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~g~ 441 (513)
+++|++|++.+++...... +|...|..++| +|++..|++++
T Consensus 244 ~~tIkLWd~~~~~~~~~~~-------------------------------------gh~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 244 PGYVHKIDLKNYSISSLKT-------------------------------------GSLENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp SSEEEEEETTTTEEEEEEC-------------------------------------SCCSCCCEEEETTCSSCEEEEECS
T ss_pred CCeEEEEECCCCeEEEEEc-------------------------------------CCCceEEEEEeeeCCCCCEEEEEc
Confidence 6999999999877643331 23344899999 99999999999
Q ss_pred CCCcEEEEEeCC-----CCcc-------e-------eeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 442 GNGSVRLWAIES-----ETKD-------I-------QPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 442 ~dg~v~vwd~~~-----~~~~-------~-------~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
.+|+ ++|.... .... + ..+..+.+...|.+++|||||+.+|++..-+..+.-|.......
T Consensus 287 edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~i~~~~~~y~i~s~~~ 365 (588)
T 2j04_A 287 KTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYDMERVAFKYKIASEQS 365 (588)
T ss_dssp SCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEEEECSSCCCCCSSSCC
T ss_pred CCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEeccCceeEEeeccceE
Confidence 9999 9998731 1000 0 01112223456999999999999999866554444555555555
Q ss_pred cceEEEec
Q 010296 503 NGVLVHPI 510 (513)
Q Consensus 503 ~~~~~~~l 510 (513)
-.+.+.||
T Consensus 366 ~~i~f~pL 373 (588)
T 2j04_A 366 FNIMFAPL 373 (588)
T ss_dssp EEEEEEES
T ss_pred EEEEEEEc
Confidence 56666665
No 88
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-35 Score=306.40 Aligned_cols=250 Identities=15% Similarity=0.194 Sum_probs=208.3
Q ss_pred hhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCC--ccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC
Q 010296 153 RVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSG--KGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS 230 (513)
Q Consensus 153 ~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 230 (513)
..+.+|.++|++++|+|++++|++|+.||+|+||++.++ .... .+.+|..+|++++|+|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~-------------------~l~~h~~~V~~l~~s~ 63 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLID-------------------TLTGHEGPVWRVDWAH 63 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEE-------------------EECCCSSCEEEEEECC
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccce-------------------eccCCcCceEEEEecC
Confidence 467899999999999999999999999999999999843 3333 2368999999999998
Q ss_pred C--CCEEEEEeCCCcEEEEeCCCcc--eeeeccCcCCCeEEEEEecC--CCeEEEEeCCCcEEEEeCCCCc--eeEEeec
Q 010296 231 D--GRYLASGGLDRHIHLWDTRIQE--HIQAFPGHRGPVSCLTFRQG--TSELFSGSFDRTVKIWNAEDRA--YISTLFG 302 (513)
Q Consensus 231 ~--~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~ 302 (513)
+ +++|++|+.||.|++||+.+++ .+..+.+|...|++++|+|+ +.+|++|+.||.|++||++++. ....+.+
T Consensus 64 ~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~ 143 (753)
T 3jro_A 64 PKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA 143 (753)
T ss_dssp TTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec
Confidence 8 9999999999999999999886 67788889999999999999 9999999999999999998873 3456678
Q ss_pred ccCCeEEEEeeCC--------------CeEEEEeCCCcEEEEecCCCe----e-eEEecCCCCeeEEEeecC---Ce-EE
Q 010296 303 HQSEVLTIDCLRK--------------ERVLTVGRDRSMQLWKVPEES----R-LVFRAPASSLECCCFISN---DE-FL 359 (513)
Q Consensus 303 ~~~~v~~~~~~~~--------------~~~~~~~~d~~i~iwd~~~~~----~-~~~~~~~~~v~~~~~~~~---~~-~~ 359 (513)
|...|.++.|+|. ..+++++.||.|++||+++.. . ..+..|...|.+++|+|+ +. ++
T Consensus 144 ~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~ 223 (753)
T 3jro_A 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLA 223 (753)
T ss_dssp CSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEE
T ss_pred CCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEE
Confidence 9999999999993 467799999999999998763 2 256678899999999999 65 78
Q ss_pred EEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEE
Q 010296 360 SGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAAS 439 (513)
Q Consensus 360 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 439 (513)
+++.||.|++||+.++........ .....+...|++++|+|++++|++
T Consensus 224 s~s~Dg~I~iwd~~~~~~~~~~~~--------------------------------~~~~~~~~~v~~l~~spdg~~l~s 271 (753)
T 3jro_A 224 SVSQDRTCIIWTQDNEQGPWKKTL--------------------------------LKEEKFPDVLWRASWSLSGNVLAL 271 (753)
T ss_dssp EEESSSCEEEEEESSSSSCCBCCB--------------------------------SSSSCCSSCCCCEEECTTTCCEEE
T ss_pred EEecCCEEEEecCCCCCCcceeEE--------------------------------eccCCCCCceEEEEEcCCCCEEEE
Confidence 999999999999987642211110 001345556999999999999999
Q ss_pred ecCCCcEEEEEeCC
Q 010296 440 GAGNGSVRLWAIES 453 (513)
Q Consensus 440 g~~dg~v~vwd~~~ 453 (513)
|+.||.|+||++..
T Consensus 272 ~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 272 SGGDNKVTLWKENL 285 (753)
T ss_dssp ECSSSCEECCBCCS
T ss_pred EcCCCEEEEEecCC
Confidence 99999999999984
No 89
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-35 Score=281.89 Aligned_cols=255 Identities=16% Similarity=0.260 Sum_probs=213.9
Q ss_pred ccCCCcccchhhhhc-----cCCCeEEEEECCC----CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCC
Q 010296 143 VQKPEATDEFRVLLK-----HRQSVTAVALSED----DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQ 213 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~-----h~~~V~~~~~s~~----~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (513)
+|+......+..+.. |...|++++|+|+ +.+|++|+.||.|++||+.+++.+..+
T Consensus 48 vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~---------------- 111 (366)
T 3k26_A 48 LYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHY---------------- 111 (366)
T ss_dssp EEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEE----------------
T ss_pred EEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeee----------------
Confidence 344444444444443 6688999999999 679999999999999999998877654
Q ss_pred CCCCCCcccEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCcceeeec---cCcCCCeEEEEEecCCCeEEEEeCCCcEEEE
Q 010296 214 GRATKQSKHILALAVSS-DGRYLASGGLDRHIHLWDTRIQEHIQAF---PGHRGPVSCLTFRQGTSELFSGSFDRTVKIW 289 (513)
Q Consensus 214 ~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 289 (513)
.+|...|++++|+| ++.+|++|+.||.|++||+.+++.+..+ ..|...|.+++|+|++.+|++++.||.|++|
T Consensus 112 ---~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 188 (366)
T 3k26_A 112 ---VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 188 (366)
T ss_dssp ---ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ---cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEE
Confidence 57899999999999 9999999999999999999999988887 6899999999999999999999999999999
Q ss_pred eCCCCceeEEeec----------------------------ccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCee----
Q 010296 290 NAEDRAYISTLFG----------------------------HQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESR---- 337 (513)
Q Consensus 290 d~~~~~~~~~~~~----------------------------~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~---- 337 (513)
|+++++.+..+.. |...|.+++|+ ...+++++.++.|++||+.+...
T Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~ 267 (366)
T 3k26_A 189 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDK 267 (366)
T ss_dssp ESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGG
T ss_pred ECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccc
Confidence 9998765543333 89999999999 56888999999999999977532
Q ss_pred -----------eEEecCCCCeeEEEeecC--Ce-EEEEeCCCCEEEEecCCCCeeE----EeecCCCcccCCCCcccCcC
Q 010296 338 -----------LVFRAPASSLECCCFISN--DE-FLSGSDDGSIELWSLLRKKPVY----IVKNAHPLLDGLKNFEQDEG 399 (513)
Q Consensus 338 -----------~~~~~~~~~v~~~~~~~~--~~-~~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 399 (513)
..+..|...+.+++|+|+ +. |++++.||.|++||+.++++.. .+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---------------- 331 (366)
T 3k26_A 268 IKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTH---------------- 331 (366)
T ss_dssp CCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECC----------------
T ss_pred cccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcc----------------
Confidence 256678888999999998 75 7789999999999999886543 3321
Q ss_pred ccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeC
Q 010296 400 KISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIE 452 (513)
Q Consensus 400 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~ 452 (513)
..+...|++++|+|++++|++++.||.|+|||+.
T Consensus 332 -------------------~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 332 -------------------HKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp -------------------TTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred -------------------cccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 1224559999999999999999999999999985
No 90
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=6.5e-35 Score=278.18 Aligned_cols=289 Identities=15% Similarity=0.150 Sum_probs=219.9
Q ss_pred cCCCccc--chhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcc
Q 010296 144 QKPEATD--EFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSK 221 (513)
Q Consensus 144 ~~~~~~~--~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (513)
|+..... .+..+.+|...|++++|+|++++|++++.||.|++|++.++.....+ ....|..
T Consensus 35 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-----------------~~~~~~~ 97 (372)
T 1k8k_C 35 YEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTL-----------------VILRINR 97 (372)
T ss_dssp EEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEE-----------------ECCCCSS
T ss_pred EeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeE-----------------EeecCCC
Confidence 4444443 67788899999999999999999999999999999999887644332 2356888
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcce----eeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeC------
Q 010296 222 HILALAVSSDGRYLASGGLDRHIHLWDTRIQEH----IQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNA------ 291 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~------ 291 (513)
.|.+++|+|++++|++++.++.|++|++..+.. ......|...|.+++|+|++++|++++.||.|++||+
T Consensus 98 ~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 177 (372)
T 1k8k_C 98 AARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVE 177 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTS
T ss_pred ceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccc
Confidence 999999999999999999999999999988762 3334668999999999999999999999999999995
Q ss_pred ------------CCCceeEEeecccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCe
Q 010296 292 ------------EDRAYISTLFGHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDE 357 (513)
Q Consensus 292 ------------~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~ 357 (513)
..++.+..+..|...|.+++|+|++ .+++++.|+.|++||+.++..+ .+..+...+.+++|+|++.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 257 (372)
T 1k8k_C 178 ERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESS 257 (372)
T ss_dssp CCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTE
T ss_pred ccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCC
Confidence 3677888888899999999999987 5668999999999999887765 6667888999999999998
Q ss_pred EEEEeCCCCEEEEecCC--CCee--EEeecCCCcccCCCCcccCcCcccccc--CCCCCCC----CCCcCCCCCcceEEE
Q 010296 358 FLSGSDDGSIELWSLLR--KKPV--YIVKNAHPLLDGLKNFEQDEGKISNGH--SENGNLN----PGSYHSSSAYSWVSS 427 (513)
Q Consensus 358 ~~~~~~dg~i~iwd~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~----~~~~~~~~~~~~i~~ 427 (513)
+++++.|+.|++|++.+ ++.. ..+...... .......+..+. ...+... ........|...|++
T Consensus 258 ~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 331 (372)
T 1k8k_C 258 LVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQS------SQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQ 331 (372)
T ss_dssp EEEEETTSSCEEEEEETTTTEEEECCCCCCC--------------CHHHHHHHCCCCC---------CCCSSSSSSCEEE
T ss_pred EEEEEeCCeEEEEEccCcCceEEEeeccCccccc------hhhhcchhhhhhhcccccccccCccccccccccccCCcce
Confidence 77667999999999988 5311 111110000 000000000000 0000000 000111467788999
Q ss_pred EEEe-cCC---CEEEEecCCCcEEEEEeCCCC
Q 010296 428 VTVC-GGS---DLAASGAGNGSVRLWAIESET 455 (513)
Q Consensus 428 ~~~s-~~~---~~l~~g~~dg~v~vwd~~~~~ 455 (513)
++|+ ++| .+|++|+.||.|+||++.+..
T Consensus 332 ~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 332 ISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp EEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred eEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 9966 666 999999999999999998763
No 91
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-35 Score=291.77 Aligned_cols=270 Identities=10% Similarity=0.015 Sum_probs=206.3
Q ss_pred cCCCeEEEEECCCC---------CeEEE-------------------EeCCceEEEEeCCCCccccccCCChhhhccCCC
Q 010296 158 HRQSVTAVALSEDD---------SKGFS-------------------ASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGA 209 (513)
Q Consensus 158 h~~~V~~~~~s~~~---------~~l~t-------------------~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 209 (513)
+.+.|.+|+|+|++ ++||+ ++.|++|+||++.+++.....
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~------------ 199 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVK------------ 199 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEE------------
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceE------------
Confidence 57788888888875 56655 557899999999876542110
Q ss_pred CCCCCCCCCCcccEEEEEEcCC------CCEEEEEeCCCcEEEEeCCCcce-----------eeeccCcCCCeEEEEEec
Q 010296 210 KDPQGRATKQSKHILALAVSSD------GRYLASGGLDRHIHLWDTRIQEH-----------IQAFPGHRGPVSCLTFRQ 272 (513)
Q Consensus 210 ~~~~~~~~~~~~~v~~~~~s~~------~~~l~s~~~dg~i~vwd~~~~~~-----------~~~~~~~~~~v~~~~~~~ 272 (513)
...+.+|...|.+++|+|+ +.+||+++.||+|+|||+..+.. ...+.+|...|++++|++
T Consensus 200 ---~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~ 276 (524)
T 2j04_B 200 ---VQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS 276 (524)
T ss_dssp ---EEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS
T ss_pred ---EEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC
Confidence 0012456788999999996 57999999999999999986642 236778999999999998
Q ss_pred CCCeEEEEeCCCcEEEEeCCCCc-eeEEeecccCCeEEE--EeeCCC--eEEEEeCCCcEEEEecCCCeee-EEecCC--
Q 010296 273 GTSELFSGSFDRTVKIWNAEDRA-YISTLFGHQSEVLTI--DCLRKE--RVLTVGRDRSMQLWKVPEESRL-VFRAPA-- 344 (513)
Q Consensus 273 ~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~--~~~~~~--~~~~~~~d~~i~iwd~~~~~~~-~~~~~~-- 344 (513)
+ ..|++|+.||+|++||++++. +...+.+|...|.++ .|++++ .|++++.|++|++||+++.... .+..+.
T Consensus 277 ~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~ 355 (524)
T 2j04_B 277 P-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG 355 (524)
T ss_dssp S-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC
T ss_pred C-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc
Confidence 6 489999999999999999764 455688899999999 567765 5679999999999999876543 333333
Q ss_pred CCeeEEEeecCC-eEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcc
Q 010296 345 SSLECCCFISND-EFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYS 423 (513)
Q Consensus 345 ~~v~~~~~~~~~-~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 423 (513)
..+.+++|+|++ .|++++.|++|++||++++.++..+.. |..
T Consensus 356 ~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-------------------------------------H~~ 398 (524)
T 2j04_B 356 SNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS-------------------------------------RET 398 (524)
T ss_dssp CSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE-------------------------------------CSS
T ss_pred CcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec-------------------------------------CCC
Confidence 357899999987 488999999999999999888776643 334
Q ss_pred eEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeee---cCcccEEEEEEeecCCCEE
Q 010296 424 WVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYN---LPLVGFVNSLAFAKSGQFL 482 (513)
Q Consensus 424 ~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~---~~~~~~v~~v~~sp~~~~l 482 (513)
.|++|+|+|++++|++|+.||+|+||++... .+..... ..+...|.+++|+|++..+
T Consensus 399 ~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~--~~~~~~~~~~~~~~~~v~~v~~sp~g~~~ 458 (524)
T 2j04_B 399 TITAIGVSRLHPMVLAGSADGSLIITNAARR--LLHGIKNSSATQKSLRLWKWDYSIKDDKY 458 (524)
T ss_dssp CEEEEECCSSCCBCEEEETTTEEECCBSCSS--TTTCC------CCCCEEEECBCCSSSCEE
T ss_pred ceEEEEeCCCCCeEEEEECCCEEEEEechHh--hccccccCccceeeeEEEEeccCCCCCeE
Confidence 5999999999999999999999999998654 2222111 1123368899999999965
No 92
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7.7e-34 Score=275.13 Aligned_cols=255 Identities=22% Similarity=0.326 Sum_probs=217.7
Q ss_pred cccCCCcccchhhh--hccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCC
Q 010296 142 RVQKPEATDEFRVL--LKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQ 219 (513)
Q Consensus 142 ~~~~~~~~~~~~~~--~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (513)
++|+.......+.+ .+|...|++|+|+|+|++|++|+.||+|+|||+.+++.+..+ .+|
T Consensus 128 ~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~-------------------~~h 188 (420)
T 4gga_A 128 YLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM-------------------TSH 188 (420)
T ss_dssp EEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-------------------CCC
T ss_pred EEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE-------------------eCC
Confidence 35666666655544 467889999999999999999999999999999999887754 678
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-ceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCc---
Q 010296 220 SKHILALAVSSDGRYLASGGLDRHIHLWDTRIQ-EHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRA--- 295 (513)
Q Consensus 220 ~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--- 295 (513)
...|.+++++ +.+|++|+.|+.+++|+.... ..+..+.+|...+..+.|+|++.++++++.|+.|++|++.+++
T Consensus 189 ~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~ 266 (420)
T 4gga_A 189 SARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW 266 (420)
T ss_dssp SSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCS
T ss_pred CCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccc
Confidence 8999998885 679999999999999998764 4567788999999999999999999999999999999998765
Q ss_pred -eeEEeecccCCeEEEEeeCCC-eE-EEE--eCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEEE--eCCCCE
Q 010296 296 -YISTLFGHQSEVLTIDCLRKE-RV-LTV--GRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLSG--SDDGSI 367 (513)
Q Consensus 296 -~~~~~~~~~~~v~~~~~~~~~-~~-~~~--~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~--~~dg~i 367 (513)
.+.....|...|.+++|+|.+ .+ +++ +.|++|++||+.++...........+.++.|++++. ++++ +.|+.|
T Consensus 267 ~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I 346 (420)
T 4gga_A 267 VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQL 346 (420)
T ss_dssp CCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCE
T ss_pred eeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEE
Confidence 345667799999999999954 33 333 479999999999999887777778899999999885 5544 479999
Q ss_pred EEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEE
Q 010296 368 ELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVR 447 (513)
Q Consensus 368 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~ 447 (513)
+|||+.+++++..+. +|...|++++|+|+|++|+||+.||+|+
T Consensus 347 ~iwd~~~~~~v~~l~-------------------------------------gH~~~V~~l~~spdg~~l~S~s~D~tvr 389 (420)
T 4gga_A 347 VIWKYPTMAKVAELK-------------------------------------GHTSRVLSLTMSPDGATVASAAADETLR 389 (420)
T ss_dssp EEEETTTCCEEEEEC-------------------------------------CCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred EEEECCCCcEEEEEc-------------------------------------CCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 999999999998884 3445599999999999999999999999
Q ss_pred EEEeCCC
Q 010296 448 LWAIESE 454 (513)
Q Consensus 448 vwd~~~~ 454 (513)
|||+...
T Consensus 390 iWdv~~~ 396 (420)
T 4gga_A 390 LWRCFEL 396 (420)
T ss_dssp EECCSCS
T ss_pred EEECCCC
Confidence 9999765
No 93
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=269.20 Aligned_cols=255 Identities=17% Similarity=0.226 Sum_probs=224.6
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCccc
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKH 222 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (513)
+|+......+..+.+|.+.|++++|+|++++|++++.||.|++||+.+++.+..+ .|...
T Consensus 58 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--------------------~~~~~ 117 (369)
T 3zwl_B 58 VWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATW--------------------KSPVP 117 (369)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEE--------------------ECSSC
T ss_pred EEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe--------------------ecCCC
Confidence 5666777788889999999999999999999999999999999999998877654 36778
Q ss_pred EEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCcc-----------eeeeccCcCC--CeEEEEEecCCCeEEEEeCCC
Q 010296 223 ILALAVSSDGRYLASGGLD-----RHIHLWDTRIQE-----------HIQAFPGHRG--PVSCLTFRQGTSELFSGSFDR 284 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~~d-----g~i~vwd~~~~~-----------~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg 284 (513)
|.+++|+|++++|++++.+ +.|++|++.... .+..+..|.. .+.+++|+|++++|++++.||
T Consensus 118 v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 197 (369)
T 3zwl_B 118 VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG 197 (369)
T ss_dssp EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS
T ss_pred eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC
Confidence 9999999999999999998 999999987654 3344455666 899999999999999999999
Q ss_pred cEEEEeCCC-CceeEEeecccCCeEEEEeeCCCe-EEEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEEE
Q 010296 285 TVKIWNAED-RAYISTLFGHQSEVLTIDCLRKER-VLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLSG 361 (513)
Q Consensus 285 ~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~ 361 (513)
.|++||+.+ ...+..+..|...|.+++|+|++. +++++.++.|++||+.+........+...+.+++|+|++. ++++
T Consensus 198 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 277 (369)
T 3zwl_B 198 KISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILG 277 (369)
T ss_dssp EEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEE
T ss_pred EEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEe
Confidence 999999998 788888999999999999999884 5688899999999999988886666888999999999986 6678
Q ss_pred eCCC--------------CEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEE
Q 010296 362 SDDG--------------SIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSS 427 (513)
Q Consensus 362 ~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~ 427 (513)
+.++ .+++||+.+++++..+..+ ...|++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-------------------------------------~~~v~~ 320 (369)
T 3zwl_B 278 GGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGH-------------------------------------FGPLNT 320 (369)
T ss_dssp ECCC-------------CEEEEEETTTCCEEEEEECC-------------------------------------SSCEEE
T ss_pred ecCCCceEEEEecCCCcceeEEEecCCCcchhheecc-------------------------------------cCcEEE
Confidence 8777 8999999999988887533 334999
Q ss_pred EEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 428 VTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 428 ~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
++|+|++++|++++.||.|+||++..+
T Consensus 321 ~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 321 VAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp EEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred EEECCCCCEEEEEcCCCeEEEEECccc
Confidence 999999999999999999999999865
No 94
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2e-34 Score=276.04 Aligned_cols=255 Identities=16% Similarity=0.225 Sum_probs=206.7
Q ss_pred ccCCCcccchhhh--hccCCCeEEEEECC-CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCC
Q 010296 143 VQKPEATDEFRVL--LKHRQSVTAVALSE-DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQ 219 (513)
Q Consensus 143 ~~~~~~~~~~~~~--~~h~~~V~~~~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (513)
+|+.........+ .+|.+.|++++|+| ++.+|++++.|+.|++||+.+.. ...+. ....|
T Consensus 100 iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~----------------~~~~~ 162 (383)
T 3ei3_B 100 LWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV-IQVFA----------------KTDSW 162 (383)
T ss_dssp EEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCE-EEEEE----------------CCCCS
T ss_pred EEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc-eEEEe----------------ccCCC
Confidence 4444444444444 37999999999999 78999999999999999998633 22220 12345
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCC-eEEEEeCCCcEEEEeCCC----C
Q 010296 220 SKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTS-ELFSGSFDRTVKIWNAED----R 294 (513)
Q Consensus 220 ~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~----~ 294 (513)
...|.+++|+|++++|++|+.|+.|++||+ +++.+..+.+|...|.+++|+|+++ +|++++.|+.|++||+++ +
T Consensus 163 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 241 (383)
T 3ei3_B 163 DYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN 241 (383)
T ss_dssp SCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT
T ss_pred CCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc
Confidence 688999999999999999999999999999 5778889999999999999999999 899999999999999987 5
Q ss_pred ceeEEeecccCCeEEEEeeC-CC-eEEEEeCCCcEEEEecCCCeee-EEecC-----------------CCCeeEEEeec
Q 010296 295 AYISTLFGHQSEVLTIDCLR-KE-RVLTVGRDRSMQLWKVPEESRL-VFRAP-----------------ASSLECCCFIS 354 (513)
Q Consensus 295 ~~~~~~~~~~~~v~~~~~~~-~~-~~~~~~~d~~i~iwd~~~~~~~-~~~~~-----------------~~~v~~~~~~~ 354 (513)
.++..+ +|...|.+++|+| ++ .+++++.|+.|++||+.+.... .+..+ ...+..++++|
T Consensus 242 ~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~ 320 (383)
T 3ei3_B 242 SYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYP 320 (383)
T ss_dssp CEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBC
T ss_pred ceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecC
Confidence 566666 6999999999999 87 5568889999999999876543 22222 23445577777
Q ss_pred CCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCC
Q 010296 355 NDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGS 434 (513)
Q Consensus 355 ~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 434 (513)
++.+ +++.||.|+|||+.+++++..+.... +...+.+++|+|++
T Consensus 321 dg~~-s~s~d~~i~iwd~~~~~~~~~l~~~~-----------------------------------~~~~~~~~~~s~~g 364 (383)
T 3ei3_B 321 DDQL-LLNDKRTIDIYDANSGGLVHQLRDPN-----------------------------------AAGIISLNKFSPTG 364 (383)
T ss_dssp CTTT-CTTCCCCEEEEETTTCCEEEEECBTT-----------------------------------BCSCCCEEEECTTS
T ss_pred Cccc-ccCCCCeEEEEecCCCceeeeecCCC-----------------------------------CCceEEEEEEecCc
Confidence 7777 88899999999999999988886421 22337888999999
Q ss_pred CEEEEecCCCcEEEEEeCC
Q 010296 435 DLAASGAGNGSVRLWAIES 453 (513)
Q Consensus 435 ~~l~~g~~dg~v~vwd~~~ 453 (513)
++|++|+ ||.|+||++.+
T Consensus 365 ~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 365 DVLASGM-GFNILIWNRED 382 (383)
T ss_dssp SEEEEEE-TTEEEEEECC-
T ss_pred cEEEEec-CCcEEEEecCC
Confidence 9999997 99999999864
No 95
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.2e-34 Score=278.95 Aligned_cols=268 Identities=12% Similarity=0.097 Sum_probs=216.6
Q ss_pred chhhhhccCCCeEEEEECCC----C---CeEEEEeCCceEEEEeCCCCcc-----ccccCCChhhhccCCCCCCCCCCCC
Q 010296 151 EFRVLLKHRQSVTAVALSED----D---SKGFSASKDGSILHWDVSSGKG-----VKYLWPSEEVLKSHGAKDPQGRATK 218 (513)
Q Consensus 151 ~~~~~~~h~~~V~~~~~s~~----~---~~l~t~~~dg~v~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (513)
.+..+.+|...|++++|+|+ + .+|++++.||.|++|++.++.. ...+ ..
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~-------------------~~ 114 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKL-------------------DL 114 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEE-------------------CC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceee-------------------cc
Confidence 57778899999999999999 9 9999999999999999988775 3332 44
Q ss_pred C-----cccEEEEEEc----CCCCE-EEEEeCCCcEEEEeCCC------cceee-----ec-------cCcCCCeEEEEE
Q 010296 219 Q-----SKHILALAVS----SDGRY-LASGGLDRHIHLWDTRI------QEHIQ-----AF-------PGHRGPVSCLTF 270 (513)
Q Consensus 219 ~-----~~~v~~~~~s----~~~~~-l~s~~~dg~i~vwd~~~------~~~~~-----~~-------~~~~~~v~~~~~ 270 (513)
| ...|.+++|+ |++.+ |++++.+|.|++||+.+ ++.+. .+ ..|...|.+++|
T Consensus 115 ~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 194 (397)
T 1sq9_A 115 LDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDI 194 (397)
T ss_dssp SCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEE
T ss_pred cccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEE
Confidence 5 5889999999 99999 99999999999999998 76666 66 448899999999
Q ss_pred ecCCCeEEEEeCCCcEEEEeCCCCceeEEeec---c---cCCeEEEEeeCCCe-EEEEeCC---CcEEEEecCCCeee-E
Q 010296 271 RQGTSELFSGSFDRTVKIWNAEDRAYISTLFG---H---QSEVLTIDCLRKER-VLTVGRD---RSMQLWKVPEESRL-V 339 (513)
Q Consensus 271 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~---~~~v~~~~~~~~~~-~~~~~~d---~~i~iwd~~~~~~~-~ 339 (513)
+|++ +|++++.||.|++||+++++.+..+.. | ...|.+++|+|++. +++++.+ +.|++||+.+...+ .
T Consensus 195 ~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~ 273 (397)
T 1sq9_A 195 SERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGS 273 (397)
T ss_dssp CTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEE
T ss_pred CCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccce
Confidence 9999 999999999999999999999999988 8 99999999999875 5578888 99999999887766 4
Q ss_pred Eec-------------CCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCcccccc
Q 010296 340 FRA-------------PASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGH 405 (513)
Q Consensus 340 ~~~-------------~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 405 (513)
+.. |...|.+++|+|++. |++++.||.|++||+.+++++..+......... .. .
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~----~~--------~ 341 (397)
T 1sq9_A 274 LSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEI----EE--------D 341 (397)
T ss_dssp ECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSS----GG--------G
T ss_pred eccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccc----hh--------h
Confidence 555 788999999999885 779999999999999999998888721100000 00 0
Q ss_pred CCCCCCCCCCcCCCCCcceEEEEEEecCC----------CEEEEecCCCcEEEEEeCCC
Q 010296 406 SENGNLNPGSYHSSSAYSWVSSVTVCGGS----------DLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~----------~~l~~g~~dg~v~vwd~~~~ 454 (513)
...+.. .....|...|++++|+|++ ++|++++.||.|+||++.++
T Consensus 342 ~~~g~~----~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 342 ILAVDE----HGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CCCBCT----TSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred hhcccc----ccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 000000 0002236679999999998 79999999999999999875
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-34 Score=277.56 Aligned_cols=326 Identities=13% Similarity=0.082 Sum_probs=233.0
Q ss_pred CCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCc---cccccCCChh---------------hhccC-------------
Q 010296 159 RQSVTAVALSEDDSKGFSASKDGSILHWDVSSGK---GVKYLWPSEE---------------VLKSH------------- 207 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~---~~~~~~~~~~---------------~~~~~------------- 207 (513)
..+|++++|+|+|++|+++ .++.|++||+.+++ .+..+..... .+...
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4689999999999966665 57899999999988 4443321110 00000
Q ss_pred -------CCCCCCCCCCCCcccEEEEEEcCCCCEE-EEEeCCCcEEEEeCC--Ccceeeecc--CcCCCeEEEEEecCCC
Q 010296 208 -------GAKDPQGRATKQSKHILALAVSSDGRYL-ASGGLDRHIHLWDTR--IQEHIQAFP--GHRGPVSCLTFRQGTS 275 (513)
Q Consensus 208 -------~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~dg~i~vwd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~ 275 (513)
....+.....+|...|++++|+|++++| ++|+.||.|+||++. +++.+..+. .|...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 0000111223567789999999999996 899999999999999 888888876 5678999999999999
Q ss_pred eEEEEeCCCcEEEEeCCCCceeE----EeecccCCeEEEEeeCC---C-eEEEEeCCCcEEEEecCCCeeeE--EecCCC
Q 010296 276 ELFSGSFDRTVKIWNAEDRAYIS----TLFGHQSEVLTIDCLRK---E-RVLTVGRDRSMQLWKVPEESRLV--FRAPAS 345 (513)
Q Consensus 276 ~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~---~-~~~~~~~d~~i~iwd~~~~~~~~--~~~~~~ 345 (513)
+|++++.+|.|++|++.++.... .+.+|...|.+++|+|+ + .+++++.|+.|++||+.++..+. ...|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 99999999999999998876544 77889999999999998 8 56689999999999999877653 447889
Q ss_pred CeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcce
Q 010296 346 SLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSW 424 (513)
Q Consensus 346 ~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 424 (513)
.|.+++|+ ++. |++++.|+.|++||+.+++++..+...+.... +.... ........ ..........
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~--~~~~~~~~~~ 309 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKP-YLNDQ---------HLAPPRFQ--NENNDIIEFA 309 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGG-GCCTT---------SBC------------CBCCC
T ss_pred ceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhh-hhhhc---------cccccccc--ccccccceEE
Confidence 99999999 774 88999999999999999999888764321100 00000 00000000 0000122344
Q ss_pred EEEEEEecCCCEEEEec-CCCcEEEEEe--CCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecC------CCccccc
Q 010296 425 VSSVTVCGGSDLAASGA-GNGSVRLWAI--ESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQ------EPRLGRW 495 (513)
Q Consensus 425 i~~~~~s~~~~~l~~g~-~dg~v~vwd~--~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~------dg~v~~W 495 (513)
|.+++|+|++++|++++ .++.|+||++ ... ..+..+..+...+.|.+++|+|++ ++++..+. +..|.+|
T Consensus 310 v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~-~~l~~~~~~~~~~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~ 387 (450)
T 2vdu_B 310 VSKIIKSKNLPFVAFFVEATKCIIILEMSEKQK-GDLALKQIITFPYNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFI 387 (450)
T ss_dssp EEEEEECSSSSEEEEEETTCSEEEEEEECSSST-TCEEEEEEEECSSCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEE
T ss_pred EEEEEEeCCCCEEEEEECCCCeEEEEEeccCCC-CceeeccEeccCCceEEEEecCCc-EEEEEecccCCCCCCcceEEE
Confidence 99999999999999998 8999999999 433 223333333333889999999964 44444343 4558899
Q ss_pred ccCCC
Q 010296 496 GHLPA 500 (513)
Q Consensus 496 ~~~~~ 500 (513)
.+...
T Consensus 388 ~~~~~ 392 (450)
T 2vdu_B 388 EYNLN 392 (450)
T ss_dssp EEETT
T ss_pred EEEcC
Confidence 76544
No 97
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-33 Score=260.18 Aligned_cols=252 Identities=16% Similarity=0.248 Sum_probs=218.9
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCccc
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKH 222 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (513)
+|+.........+..|...|++++|+|++++|++|+.||.|++|++........ ...+..|...
T Consensus 43 vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~----------------~~~~~~~~~~ 106 (313)
T 3odt_A 43 LWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDP----------------LYTLIGHQGN 106 (313)
T ss_dssp EEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-----------------CEECCCSSC
T ss_pred EEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCc----------------ccchhhcccC
Confidence 455566667778889999999999999999999999999999999976542221 1234678999
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEec-CCCeEEEEeCCCcEEEEeCCCCceeEEee
Q 010296 223 ILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQ-GTSELFSGSFDRTVKIWNAEDRAYISTLF 301 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 301 (513)
|.+++| ++++|++++.||.|++|| .+..+..+..|...|.+++|.| ++.+|++++.||.|++|| ..+.+..+.
T Consensus 107 i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~ 180 (313)
T 3odt_A 107 VCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFS 180 (313)
T ss_dssp EEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEEC
T ss_pred EEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEe
Confidence 999999 577999999999999999 6778888889999999999998 899999999999999999 455666666
Q ss_pred c-ccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeE
Q 010296 302 G-HQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVY 379 (513)
Q Consensus 302 ~-~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~ 379 (513)
. |...+.+++|+|++.+++++.++.|++||++++..+ .+..|...+.+++|+|++.+++++.||.|++||+.+++++.
T Consensus 181 ~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 260 (313)
T 3odt_A 181 GIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQ 260 (313)
T ss_dssp SSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEE
T ss_pred ccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeE
Confidence 6 889999999999999999999999999999987766 56678999999999999999999999999999999999888
Q ss_pred EeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 380 IVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
.+.... ..|++++|+|+++ +++++.||.|++|++.++
T Consensus 261 ~~~~~~-------------------------------------~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 261 VITLPA-------------------------------------ISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp EEECSS-------------------------------------SCEEEEEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred EEeccC-------------------------------------ceEEEEEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence 875432 2399999999998 667899999999999876
No 98
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.3e-34 Score=276.30 Aligned_cols=256 Identities=16% Similarity=0.266 Sum_probs=212.6
Q ss_pred cchhhhhccCCCeEEEEECC-CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE
Q 010296 150 DEFRVLLKHRQSVTAVALSE-DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV 228 (513)
Q Consensus 150 ~~~~~~~~h~~~V~~~~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 228 (513)
..+..+.+|.+.|++++|+| ++.+|++|+.||+|+||++.++...... ..+...+.+|...|++++|
T Consensus 72 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~------------~~~~~~~~~h~~~v~~~~~ 139 (402)
T 2aq5_A 72 KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPL------------REPVITLEGHTKRVGIVAW 139 (402)
T ss_dssp TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCB------------CSCSEEEECCSSCEEEEEE
T ss_pred CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcccc------------CCceEEecCCCCeEEEEEE
Confidence 34556789999999999999 9999999999999999999987532211 0112234689999999999
Q ss_pred cCCC-CEEEEEeCCCcEEEEeCCCcceeeec--cCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEe-eccc
Q 010296 229 SSDG-RYLASGGLDRHIHLWDTRIQEHIQAF--PGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTL-FGHQ 304 (513)
Q Consensus 229 s~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~ 304 (513)
+|++ .+|++++.||.|++||+.+++.+..+ ..|...|.+++|+|++++|++++.||.|++||+++++.+..+ ..|.
T Consensus 140 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 219 (402)
T 2aq5_A 140 HPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHE 219 (402)
T ss_dssp CSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSC
T ss_pred CcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCC
Confidence 9998 69999999999999999999999998 789999999999999999999999999999999999998888 6787
Q ss_pred CC-eEEEEeeCCCeEEEEe----CCCcEEEEecCCCee---eEEecCCCCeeEEEeecCCe-EE-EEeCCCCEEEEecCC
Q 010296 305 SE-VLTIDCLRKERVLTVG----RDRSMQLWKVPEESR---LVFRAPASSLECCCFISNDE-FL-SGSDDGSIELWSLLR 374 (513)
Q Consensus 305 ~~-v~~~~~~~~~~~~~~~----~d~~i~iwd~~~~~~---~~~~~~~~~v~~~~~~~~~~-~~-~~~~dg~i~iwd~~~ 374 (513)
+. +.++.|+|++.+++++ .++.|++||+.+... .....+...+.+++|+|++. ++ +++.||.|++|++.+
T Consensus 220 ~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 220 GTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp SSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS
T ss_pred CCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC
Confidence 76 8999999999877554 899999999987654 23345677899999999986 43 566799999999999
Q ss_pred CCe-eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCC
Q 010296 375 KKP-VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIES 453 (513)
Q Consensus 375 ~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~ 453 (513)
+++ +..+... .+...|.+++|+|++.++++ .++.+++|++.+
T Consensus 300 ~~~~~~~l~~~-----------------------------------~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 300 EAPFLHYLSMF-----------------------------------SSKESQRGMGYMPKRGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp STTCEEEEEEE-----------------------------------CCSSCCSEEEECCGGGSCGG--GTEEEEEEEEET
T ss_pred CCcceEeeccc-----------------------------------ccCCcccceEEeccccccee--cceeEEEEEcCC
Confidence 885 4444321 12344999999999998775 456999999987
Q ss_pred C
Q 010296 454 E 454 (513)
Q Consensus 454 ~ 454 (513)
+
T Consensus 343 ~ 343 (402)
T 2aq5_A 343 R 343 (402)
T ss_dssp T
T ss_pred C
Confidence 6
No 99
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.2e-33 Score=271.05 Aligned_cols=280 Identities=18% Similarity=0.230 Sum_probs=201.1
Q ss_pred ccCCCeEEEEECC-CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC---C
Q 010296 157 KHRQSVTAVALSE-DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD---G 232 (513)
Q Consensus 157 ~h~~~V~~~~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~ 232 (513)
+|...|++++|+| ++.+|++++.||.|++||+.++.....+ .+...+.++.|+|. +
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~ 156 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF--------------------NFEETVYSHHMSPVSTKH 156 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEE--------------------ECSSCEEEEEECSSCSSC
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceec--------------------cCCCceeeeEeecCCCCC
Confidence 6999999999999 7889999999999999999998876644 46677999999984 4
Q ss_pred CEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCe-EEEEeCCCcEEEEeCCCCc-eeEEe----------
Q 010296 233 RYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSE-LFSGSFDRTVKIWNAEDRA-YISTL---------- 300 (513)
Q Consensus 233 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~-~~~~~---------- 300 (513)
.+|++++.++.|++||+.+++.+..+..|...|.+++|+|++.+ |++++.||.|++||++++. .+..+
T Consensus 157 ~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 236 (408)
T 4a11_B 157 CLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQA 236 (408)
T ss_dssp CEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCC
T ss_pred cEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccccccccee
Confidence 49999999999999999999999999999999999999999985 8899999999999998765 33333
Q ss_pred -----ecccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeeeEEec-------CCCCeeEEEeecCCeEEEEeCCCCE
Q 010296 301 -----FGHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRLVFRA-------PASSLECCCFISNDEFLSGSDDGSI 367 (513)
Q Consensus 301 -----~~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~~~dg~i 367 (513)
..|...|.+++|+|++ .+++++.|+.|++||+.++....... .......+.......+++++.++.|
T Consensus 237 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 316 (408)
T 4a11_B 237 VESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTI 316 (408)
T ss_dssp TTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEE
T ss_pred eccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEE
Confidence 5688899999999988 56689999999999998876542111 1111222233334568888999999
Q ss_pred EEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEE
Q 010296 368 ELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVR 447 (513)
Q Consensus 368 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~ 447 (513)
++||+.+++++..+.. |...|++++|+|++++|++|+.||.|+
T Consensus 317 ~v~d~~~~~~~~~~~~-------------------------------------~~~~v~~~~~s~~~~~l~s~~~dg~i~ 359 (408)
T 4a11_B 317 AVYTVYSGEQITMLKG-------------------------------------HYKTVDCCVFQSNFQELYSGSRDCNIL 359 (408)
T ss_dssp EEEETTTCCEEEEECC-------------------------------------CSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred EEEECcCCcceeeecc-------------------------------------CCCeEEEEEEcCCCCEEEEECCCCeEE
Confidence 9999999999888743 334499999999999999999999999
Q ss_pred EEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCC
Q 010296 448 LWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLP 499 (513)
Q Consensus 448 vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~ 499 (513)
+|++.+. ..+.... .......+.|....+.+..+.++.+++|+...
T Consensus 360 iw~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 360 AWVPSLY-EPVPDDD-----ETTTKSQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp EEEECC----------------------------------------------
T ss_pred EEeCCCC-CccCCCC-----ceEeccccccccceeecccCccCceeecCCcc
Confidence 9999987 2222111 11222345555555555558899999997653
No 100
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-34 Score=275.09 Aligned_cols=288 Identities=13% Similarity=0.113 Sum_probs=201.9
Q ss_pred ccCCCcc--cchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCc---cccccCCChhhhccCCCCCCCCCCC
Q 010296 143 VQKPEAT--DEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGK---GVKYLWPSEEVLKSHGAKDPQGRAT 217 (513)
Q Consensus 143 ~~~~~~~--~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (513)
+|+.... .....+.+|.+.|++++|+|++++|++|+.|++|++||+.++. ... .+.
T Consensus 37 iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~-------------------~~~ 97 (377)
T 3dwl_C 37 LYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTL-------------------VLL 97 (377)
T ss_dssp EEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEE-------------------ECC
T ss_pred EEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeee-------------------Eec
Confidence 3444444 6778888999999999999999999999999999999999876 222 245
Q ss_pred CCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcc---eeeeccC-cCCCeEEEEEecCCCeEEEEeCCCcEEEEeCC-
Q 010296 218 KQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQE---HIQAFPG-HRGPVSCLTFRQGTSELFSGSFDRTVKIWNAE- 292 (513)
Q Consensus 218 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~- 292 (513)
.|...|++++|+|++++|++|+.|+.|++||+.+++ ....+.. |...|.+++|+|++++|++++.|+.|++||+.
T Consensus 98 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 177 (377)
T 3dwl_C 98 RLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYV 177 (377)
T ss_dssp CCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECC
T ss_pred ccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEe
Confidence 789999999999999999999999999999999887 4677777 99999999999999999999999999999985
Q ss_pred -----------------CCceeEEeecccCCeEEEEeeCCCe-EEEEeCCCcEEEEecCCCee-----eEEecCCCCeeE
Q 010296 293 -----------------DRAYISTLFGHQSEVLTIDCLRKER-VLTVGRDRSMQLWKVPEESR-----LVFRAPASSLEC 349 (513)
Q Consensus 293 -----------------~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~-----~~~~~~~~~v~~ 349 (513)
.++++..+ +|...|.+++|+|++. +++++.|+.|++||+.++.. ..+..|...+.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~ 256 (377)
T 3dwl_C 178 RDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRS 256 (377)
T ss_dssp SSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEE
T ss_pred cccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEE
Confidence 34456666 8999999999999885 66899999999999988765 367788889999
Q ss_pred EEeecCCeEEEEeCCCCEEEEecCCCC--eeEEeecCCCcccC------------CCC--cccCcCccccccCCCCCCCC
Q 010296 350 CCFISNDEFLSGSDDGSIELWSLLRKK--PVYIVKNAHPLLDG------------LKN--FEQDEGKISNGHSENGNLNP 413 (513)
Q Consensus 350 ~~~~~~~~~~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~------------~~~--~~~~~~~i~~~~~~~~~~~~ 413 (513)
++|+|++.+++++.++.+.+|+..... ....+......... ... +......+.. ....+....
T Consensus 257 ~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~ 335 (377)
T 3dwl_C 257 LLWANESAIVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRN-MDLKGSSQS 335 (377)
T ss_dssp EEEEETTEEEEEESSSSEEEECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------
T ss_pred EEEcCCCCEEEEEcCCcEEEEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccc-hhhcccccc
Confidence 999999986655566667788776432 11111111100000 000 0000000000 000000001
Q ss_pred CCcCCCCCcceEEEEEEecCC-C---EEEEecCCCcEEEEEe
Q 010296 414 GSYHSSSAYSWVSSVTVCGGS-D---LAASGAGNGSVRLWAI 451 (513)
Q Consensus 414 ~~~~~~~~~~~i~~~~~s~~~-~---~l~~g~~dg~v~vwd~ 451 (513)
.......|...|+++++.+.. . .|+||+.||.|+|||+
T Consensus 336 ~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 336 ISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 111224588889999976643 3 6999999999999985
No 101
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=4.4e-33 Score=271.30 Aligned_cols=289 Identities=9% Similarity=0.063 Sum_probs=235.8
Q ss_pred hhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC
Q 010296 152 FRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD 231 (513)
Q Consensus 152 ~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 231 (513)
+..+..+ ..+.+++|+|++.++++++.++.|++||+.+++....+.. ....+|...|.+++|+|+
T Consensus 116 ~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~--------------~~~~~~~~~v~~~~~~~~ 180 (433)
T 3bws_A 116 ISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPP--------------EKYKKKLGFVETISIPEH 180 (433)
T ss_dssp EEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCC--------------HHHHTTCCEEEEEEEGGG
T ss_pred EEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCc--------------ccccccCCceeEEEEcCC
Confidence 3334334 4567999999878888888899999999998887653210 012467889999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEE-EeCCCcEEEEeCCCCceeEEeecccCCeEEE
Q 010296 232 GRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFS-GSFDRTVKIWNAEDRAYISTLFGHQSEVLTI 310 (513)
Q Consensus 232 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 310 (513)
+.++++++.++.|++||+.+++.+..+..|...+.+++|+|+++++++ ++.++.|++||+.+++.+..+.. ...+.++
T Consensus 181 ~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~ 259 (433)
T 3bws_A 181 NELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGL 259 (433)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEE
T ss_pred CEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEE
Confidence 999999999999999999999999999889999999999999998864 45799999999999988877764 4558999
Q ss_pred EeeCCC-eEEEEe--------CCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe--EEEEeCCCCEEEEecCCCCeeE
Q 010296 311 DCLRKE-RVLTVG--------RDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE--FLSGSDDGSIELWSLLRKKPVY 379 (513)
Q Consensus 311 ~~~~~~-~~~~~~--------~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~dg~i~iwd~~~~~~~~ 379 (513)
+|+|++ .+++++ .++.|++||+.++.......+...+.+++|+|++. +++++.++.|++||+.+++.+.
T Consensus 260 ~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~ 339 (433)
T 3bws_A 260 LLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQK 339 (433)
T ss_dssp EECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEE
Confidence 999988 455666 48899999999888776666666888999999984 4577899999999999988877
Q ss_pred EeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecC---------------CC
Q 010296 380 IVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAG---------------NG 444 (513)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~---------------dg 444 (513)
.+.... .+.+++|+|++++|++++. ||
T Consensus 340 ~~~~~~--------------------------------------~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg 381 (433)
T 3bws_A 340 SIPVFD--------------------------------------KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLG 381 (433)
T ss_dssp EEECSS--------------------------------------SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCC
T ss_pred EecCCC--------------------------------------CCCeEEEcCCCCEEEEEecCCCccccccccccccce
Confidence 765321 2889999999998888876 57
Q ss_pred cEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccC
Q 010296 445 SVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHL 498 (513)
Q Consensus 445 ~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~ 498 (513)
.|++||+.++ ..+..+. ....+.+++|+|+|++|+++++.|+.|++|++.
T Consensus 382 ~v~~~d~~~~-~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 382 KVYVIDTTTD-TVKEFWE---AGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEEEEETTTT-EEEEEEE---CSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred EEEEEECCCC-cEEEEec---CCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 9999999887 3333332 355789999999999999886679999999875
No 102
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-34 Score=280.73 Aligned_cols=275 Identities=12% Similarity=0.208 Sum_probs=213.9
Q ss_pred EECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC-CCCEEEEEeCCCcE
Q 010296 166 ALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS-DGRYLASGGLDRHI 244 (513)
Q Consensus 166 ~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i 244 (513)
.|+|++..+++++ .|+.. ++.+..+ ..+|...|++++|+| ++.+|++|+.||.|
T Consensus 34 ~f~~~~~~~~~~~------~w~~~-g~~~~~~------------------~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v 88 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLR-GKLIATL------------------MENEPNSITSSAVSPGETPYLITGSDQGVI 88 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCC-CCEEEEE------------------CTTTTSCEEEEEEECSSSCEEEEEETTSEE
T ss_pred hcCCccccccccc------ccccc-ceEEeee------------------ccCCCCceEEEEECCCCCCEEEEecCCceE
Confidence 4788888877765 37743 4444332 257899999999999 99999999999999
Q ss_pred EEEeCCC---cc---eeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCC---CCceeEEeec------------c
Q 010296 245 HLWDTRI---QE---HIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAE---DRAYISTLFG------------H 303 (513)
Q Consensus 245 ~vwd~~~---~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~------------~ 303 (513)
+|||+.+ +. ....+ .|...|.+++|+|++.+|++++.||.|++||+. +++.+..+.. +
T Consensus 89 ~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 167 (437)
T 3gre_A 89 KIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGK 167 (437)
T ss_dssp EEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSS
T ss_pred EEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCccc
Confidence 9999876 43 22333 489999999999999999999999999999994 5555443332 3
Q ss_pred cCCeEEEE--eeCCC-eEEEEeCCCcEEEEecCCCeee-EEec--CCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCC
Q 010296 304 QSEVLTID--CLRKE-RVLTVGRDRSMQLWKVPEESRL-VFRA--PASSLECCCFISNDE-FLSGSDDGSIELWSLLRKK 376 (513)
Q Consensus 304 ~~~v~~~~--~~~~~-~~~~~~~d~~i~iwd~~~~~~~-~~~~--~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~ 376 (513)
...+.++. +++++ .+++++.|+.|++||+++...+ .+.. |...|.+++|+|++. |++|+.||.|++||+++++
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 247 (437)
T 3gre_A 168 NEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV 247 (437)
T ss_dssp CCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE
T ss_pred ccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc
Confidence 44556665 34556 5668999999999999988776 4444 678999999999986 7899999999999999999
Q ss_pred eeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEe----cCCCEEEEecCCCcEEEEEeC
Q 010296 377 PVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVC----GGSDLAASGAGNGSVRLWAIE 452 (513)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s----~~~~~l~~g~~dg~v~vwd~~ 452 (513)
++..+.. .+...|++++|+ |++.+|++|+.||.|+|||+.
T Consensus 248 ~~~~~~~------------------------------------~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 248 LIRSWSF------------------------------------GDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp EEEEEBC------------------------------------TTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT
T ss_pred EEEEEec------------------------------------CCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC
Confidence 8888753 223449999665 467899999999999999998
Q ss_pred CCCcceeeeeec------------------------CcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcccce
Q 010296 453 SETKDIQPLYNL------------------------PLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAARNGV 505 (513)
Q Consensus 453 ~~~~~~~~~~~~------------------------~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~~~~ 505 (513)
++ ..+..+... .|...|++++|+ ++++|+++ +.||.|++|++..+.....
T Consensus 292 ~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~-~~d~~i~~wd~~~~~~~~~ 365 (437)
T 3gre_A 292 KG-HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTD-EATSSIVMFSLNELSSSKA 365 (437)
T ss_dssp TT-EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEE-GGGTEEEEEETTCGGGCEE
T ss_pred CC-cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEec-CCCCeEEEEECCCcccceE
Confidence 87 333333211 166779999999 77888888 9999999999987765433
No 103
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.5e-33 Score=265.56 Aligned_cols=261 Identities=11% Similarity=0.171 Sum_probs=204.6
Q ss_pred hccCCCeEEEEECCC---CCeEEEEeCCceEEEEeCCCCc-cccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE---
Q 010296 156 LKHRQSVTAVALSED---DSKGFSASKDGSILHWDVSSGK-GVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV--- 228 (513)
Q Consensus 156 ~~h~~~V~~~~~s~~---~~~l~t~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--- 228 (513)
.+|...|++++|+|+ +.+|++|+.||.|++|++.++. .+.. +.+|...|.+++|
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------------------~~~~~~~v~~~~~~~~ 122 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYS-------------------VKGHKEIINAIDGIGG 122 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEE-------------------ECCCSSCEEEEEEESG
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEE-------------------EEecccceEEEeeccc
Confidence 379999999999999 6999999999999999999877 4443 3578999999955
Q ss_pred ---cCCCCEEEEEeCCCcEEEEeCCCcc-eeeeccCcCC----CeEEEE----EecCCCeEEEEeCCCcEEEEeCCCCce
Q 010296 229 ---SSDGRYLASGGLDRHIHLWDTRIQE-HIQAFPGHRG----PVSCLT----FRQGTSELFSGSFDRTVKIWNAEDRAY 296 (513)
Q Consensus 229 ---s~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~----~v~~~~----~~~~~~~l~~~~~dg~i~iwd~~~~~~ 296 (513)
+|++++|++++.||.|++||+.++. .+..+..|.+ .|.+++ |+|++++|++++.||.|++||+++++.
T Consensus 123 ~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 123 LGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL 202 (357)
T ss_dssp GGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE
T ss_pred cccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce
Confidence 6789999999999999999999887 6777766554 899998 678999999999999999999999887
Q ss_pred eEEeecccCCeEEEEeeC---CC-eEEEEeCCCcEEEEecCCCeee------EEecCCCCeeEEEeecCCe--EEEEeCC
Q 010296 297 ISTLFGHQSEVLTIDCLR---KE-RVLTVGRDRSMQLWKVPEESRL------VFRAPASSLECCCFISNDE--FLSGSDD 364 (513)
Q Consensus 297 ~~~~~~~~~~v~~~~~~~---~~-~~~~~~~d~~i~iwd~~~~~~~------~~~~~~~~v~~~~~~~~~~--~~~~~~d 364 (513)
... ..|...|.+++|+| ++ .+++++.++.|++||+++.... ....|...|.+++|+|++. |++++.|
T Consensus 203 ~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 281 (357)
T 3i2n_A 203 RWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGA 281 (357)
T ss_dssp EEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred eee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCC
Confidence 554 56889999999998 55 6668999999999999876543 2237899999999999985 7799999
Q ss_pred CCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEE-EecCC
Q 010296 365 GSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAA-SGAGN 443 (513)
Q Consensus 365 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~g~~d 443 (513)
|.|++||+..+............. ........ ......|...|++++|+|++++|+ +++.|
T Consensus 282 g~i~iwd~~~~~~~~~~~~~g~~~----~~~~~~~~--------------~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d 343 (357)
T 3i2n_A 282 GGLHLWKYEYPIQRSKKDSEGIEM----GVAGSVSL--------------LQNVTLSTQPISSLDWSPDKRGLCVCSSFD 343 (357)
T ss_dssp SEEEEEEEECCSCC--CCTTSCCC----CCCCEEEE--------------EEEEECCSSCEEEEEECSSSTTEEEEEETT
T ss_pred CcEEEeecCCCcccccccCCCCcc----ccccccce--------------eeccccCCCCeeEEEEcCCCCeEEEEecCC
Confidence 999999998765443221110000 00000000 000134556699999999999998 89999
Q ss_pred CcEEEEEeCCC
Q 010296 444 GSVRLWAIESE 454 (513)
Q Consensus 444 g~v~vwd~~~~ 454 (513)
|.|+||++.+.
T Consensus 344 ~~i~iw~~~~~ 354 (357)
T 3i2n_A 344 QTVRVLIVTKL 354 (357)
T ss_dssp SEEEEEEECC-
T ss_pred CcEEEEECCCc
Confidence 99999999875
No 104
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.8e-33 Score=270.95 Aligned_cols=247 Identities=14% Similarity=0.248 Sum_probs=203.9
Q ss_pred CCCCcccEEEEEEcCC-CCEEEEEeCCCcEEEEeCCC----------cceeeeccCcCCCeEEEEEecCCC-eEEEEeCC
Q 010296 216 ATKQSKHILALAVSSD-GRYLASGGLDRHIHLWDTRI----------QEHIQAFPGHRGPVSCLTFRQGTS-ELFSGSFD 283 (513)
Q Consensus 216 ~~~~~~~v~~~~~s~~-~~~l~s~~~dg~i~vwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d 283 (513)
...|...|++++|+|+ +.+|++++.+|.|++|++.. ...+..+.+|...|.+++|+|++. +|++|+.|
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 203 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD 203 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC
Confidence 4678999999999997 78999999999999999986 567788889999999999999988 99999999
Q ss_pred CcEEEEeCCCCce-------eEEeecccCCeEEEEeeC-CC-eEEEEeCCCcEEEEecCCCe----eeEEecCCCCeeEE
Q 010296 284 RTVKIWNAEDRAY-------ISTLFGHQSEVLTIDCLR-KE-RVLTVGRDRSMQLWKVPEES----RLVFRAPASSLECC 350 (513)
Q Consensus 284 g~i~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~-~~~~~~~d~~i~iwd~~~~~----~~~~~~~~~~v~~~ 350 (513)
|.|++|++.++.. ...+.+|...|.+++|+| ++ .|++++.++.|++||+++.. ...+..|...|.++
T Consensus 204 g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 283 (430)
T 2xyi_A 204 HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCL 283 (430)
T ss_dssp SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEE
T ss_pred CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEE
Confidence 9999999987322 455678999999999999 44 56688999999999998762 33566888999999
Q ss_pred EeecCCe--EEEEeCCCCEEEEecCC-CCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEE
Q 010296 351 CFISNDE--FLSGSDDGSIELWSLLR-KKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSS 427 (513)
Q Consensus 351 ~~~~~~~--~~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~ 427 (513)
+|+|++. |++|+.||.|++||+++ ..++..+.. |...|++
T Consensus 284 ~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~-------------------------------------h~~~v~~ 326 (430)
T 2xyi_A 284 SFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-------------------------------------HKDEIFQ 326 (430)
T ss_dssp EECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC-------------------------------------CSSCEEE
T ss_pred EeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec-------------------------------------CCCCEEE
Confidence 9999874 77999999999999998 455666542 3344999
Q ss_pred EEEecCCC-EEEEecCCCcEEEEEeCCCCcc----------eeeee-ecCcccEEEEEEeecCCC-EEEEEecCCCcccc
Q 010296 428 VTVCGGSD-LAASGAGNGSVRLWAIESETKD----------IQPLY-NLPLVGFVNSLAFAKSGQ-FLIAGVGQEPRLGR 494 (513)
Q Consensus 428 ~~~s~~~~-~l~~g~~dg~v~vwd~~~~~~~----------~~~~~-~~~~~~~v~~v~~sp~~~-~l~~~~~~dg~v~~ 494 (513)
++|+|+++ +|++++.||.|+|||+...... ...+. ...|...|++++|+|+++ +|+++ +.||.|++
T Consensus 327 i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~-s~dg~i~i 405 (430)
T 2xyi_A 327 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSV-SEDNIMQV 405 (430)
T ss_dssp EEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEE-ETTSEEEE
T ss_pred EEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEE-ECCCCEEE
Confidence 99999985 7999999999999999873211 12222 223778899999999999 56666 89999999
Q ss_pred cccCCC
Q 010296 495 WGHLPA 500 (513)
Q Consensus 495 W~~~~~ 500 (513)
|++...
T Consensus 406 w~~~~~ 411 (430)
T 2xyi_A 406 WQMAEN 411 (430)
T ss_dssp EEECHH
T ss_pred eEcccc
Confidence 987643
No 105
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.2e-33 Score=267.82 Aligned_cols=251 Identities=14% Similarity=0.108 Sum_probs=195.7
Q ss_pred hhhccCCCeEEEEECCCCCeEEEEe-----------CCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCccc
Q 010296 154 VLLKHRQSVTAVALSEDDSKGFSAS-----------KDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKH 222 (513)
Q Consensus 154 ~~~~h~~~V~~~~~s~~~~~l~t~~-----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (513)
.|.+|...|.+++++ +..+++|+ .|+++++|++........+.... .......+...
T Consensus 68 ~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 135 (365)
T 4h5i_A 68 ALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSV----------DFDASTNADDY 135 (365)
T ss_dssp ECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEE----------CSSCCCCTTCC
T ss_pred EccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeee----------ceeecCCcccC
Confidence 466888899988775 45666654 47789999887654322111000 00112345566
Q ss_pred EEEEEEcCCCCEEEEEe--CCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeE--
Q 010296 223 ILALAVSSDGRYLASGG--LDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYIS-- 298 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-- 298 (513)
+.+++|||||++|++++ .|++|+|||+.+++++..+. |...|.+++|+|++++|++++.+ .+.+|+..++..+.
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~ 213 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARK 213 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeee
Confidence 89999999999987554 68999999999999998886 77899999999999999999854 56777777766553
Q ss_pred EeecccCCeEEEEeeCCCeEE-EEeCCC----cEEEEecCCCeee-----EEecCCCCeeEEEeecCCe-EEEEeCCCCE
Q 010296 299 TLFGHQSEVLTIDCLRKERVL-TVGRDR----SMQLWKVPEESRL-----VFRAPASSLECCCFISNDE-FLSGSDDGSI 367 (513)
Q Consensus 299 ~~~~~~~~v~~~~~~~~~~~~-~~~~d~----~i~iwd~~~~~~~-----~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i 367 (513)
....|...|.+++|+|++.++ +++.++ .+++|++...... .+..+...|.+++|+|+|. |++|+.|++|
T Consensus 214 ~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V 293 (365)
T 4h5i_A 214 TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSI 293 (365)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCE
T ss_pred ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEE
Confidence 345688899999999998654 677666 6888998765432 4567888999999999996 7799999999
Q ss_pred EEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEE
Q 010296 368 ELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVR 447 (513)
Q Consensus 368 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~ 447 (513)
+|||+.+++++..+. .+|..+|++|+|||+|++||+|+.|++|+
T Consensus 294 ~iwd~~~~~~~~~~~------------------------------------~gH~~~V~~v~fSpdg~~laS~S~D~tvr 337 (365)
T 4h5i_A 294 ALVKLKDLSMSKIFK------------------------------------QAHSFAITEVTISPDSTYVASVSAANTIH 337 (365)
T ss_dssp EEEETTTTEEEEEET------------------------------------TSSSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred EEEECCCCcEEEEec------------------------------------CcccCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 999999999988875 34455599999999999999999999999
Q ss_pred EEEeCCC
Q 010296 448 LWAIESE 454 (513)
Q Consensus 448 vwd~~~~ 454 (513)
||++...
T Consensus 338 vw~ip~~ 344 (365)
T 4h5i_A 338 IIKLPLN 344 (365)
T ss_dssp EEECCTT
T ss_pred EEEcCCC
Confidence 9999765
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=266.43 Aligned_cols=270 Identities=9% Similarity=0.041 Sum_probs=210.6
Q ss_pred EEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcE
Q 010296 165 VALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHI 244 (513)
Q Consensus 165 ~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 244 (513)
..+.+++.+|++|+.||+|++||+.+++.+..+ ....|.++.|+|+ +++++.|++|
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~---------------------~~~~v~~~~~~~~---~~s~s~D~~i 97 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTITTI---------------------TTPNPRTGGEHPA---IISRGPCNRL 97 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSSSCEEEE---------------------EEECCCTTCCCCS---EEEECSTTEE
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCCcEEEEE---------------------ecCCceeeeeCCc---eEEecCCCeE
Confidence 345568899999999999999999998877654 1345777888887 9999999999
Q ss_pred EEEeCC---------Ccceeeecc-CcCCCeEEEEEec--CCCeEEEEeCCCcEEEEeCCCCceeEEee-cccCCeEEEE
Q 010296 245 HLWDTR---------IQEHIQAFP-GHRGPVSCLTFRQ--GTSELFSGSFDRTVKIWNAEDRAYISTLF-GHQSEVLTID 311 (513)
Q Consensus 245 ~vwd~~---------~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~ 311 (513)
++|+.. +++.+..+. .|...|.+++|+| ++++|++++.||+|++||+.+++.+.... .+...+.+++
T Consensus 98 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~ 177 (343)
T 3lrv_A 98 LLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGV 177 (343)
T ss_dssp EEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEE
T ss_pred EEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEE
Confidence 999765 444444443 5778999999999 99999999999999999999998876653 3455899999
Q ss_pred eeCCCeEE-EEeCCCcEEEEecCCCeee--EEec-CCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEeecCCC
Q 010296 312 CLRKERVL-TVGRDRSMQLWKVPEESRL--VFRA-PASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVKNAHP 386 (513)
Q Consensus 312 ~~~~~~~~-~~~~d~~i~iwd~~~~~~~--~~~~-~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 386 (513)
|+|++.++ +++.|+.|++||++++... .+.. |...|.+++|+|++. |++++ ++.|++||+++++.+..+....
T Consensus 178 ~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~- 255 (343)
T 3lrv_A 178 LHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYT- 255 (343)
T ss_dssp ECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCB-
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccc-
Confidence 99998655 6789999999999988765 5666 889999999999997 56666 6699999999887654433210
Q ss_pred cccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceE--EEEEEecCCCEEEEecC-CCcEEEEEeCCCCcceeeeee
Q 010296 387 LLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWV--SSVTVCGGSDLAASGAG-NGSVRLWAIESETKDIQPLYN 463 (513)
Q Consensus 387 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~s~~~~~l~~g~~-dg~v~vwd~~~~~~~~~~~~~ 463 (513)
.+...+ .+++|+|++++|++++. |+.|+||++....+....
T Consensus 256 ---------------------------------~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~--- 299 (343)
T 3lrv_A 256 ---------------------------------IPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK--- 299 (343)
T ss_dssp ---------------------------------C-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE---
T ss_pred ---------------------------------cccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe---
Confidence 001112 47999999999999988 999999999776333222
Q ss_pred cCcccEEEEEEeec---CCCEEEEEecCCCcccccccCCCc
Q 010296 464 LPLVGFVNSLAFAK---SGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 464 ~~~~~~v~~v~~sp---~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
.++..++|+| +...|+++ +.||.+.+|-.....
T Consensus 300 ----~~~~~~~~~~~~~~~~~l~~~-~~d~~~~~~~~~~~~ 335 (343)
T 3lrv_A 300 ----DEESALCLQSDTADFTDMDVV-CGDGGIAAILKTNDS 335 (343)
T ss_dssp ----EEEEECCC----CCCCEEEEE-EETTEEEEEEECSSE
T ss_pred ----cCceeEecCccccccceeEEE-ecCCceEEEEecCCe
Confidence 6688999999 88999988 788899988554443
No 107
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-33 Score=290.40 Aligned_cols=252 Identities=19% Similarity=0.338 Sum_probs=210.2
Q ss_pred CCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCC--CcceeeeccCcCCCeEEEEEecC--CCeEEEEeCCCcEEEEe
Q 010296 215 RATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTR--IQEHIQAFPGHRGPVSCLTFRQG--TSELFSGSFDRTVKIWN 290 (513)
Q Consensus 215 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd 290 (513)
.+.+|...|++++|+|++++|++|+.||.|+||++. ++..+..+.+|...|++++|+|+ +++|++|+.||.|++||
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 357899999999999999999999999999999997 66778889999999999999988 89999999999999999
Q ss_pred CCCCc--eeEEeecccCCeEEEEeeCC--C-eEEEEeCCCcEEEEecCCCe---eeEEecCCCCeeEEEeecC-------
Q 010296 291 AEDRA--YISTLFGHQSEVLTIDCLRK--E-RVLTVGRDRSMQLWKVPEES---RLVFRAPASSLECCCFISN------- 355 (513)
Q Consensus 291 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~-~~~~~~~d~~i~iwd~~~~~---~~~~~~~~~~v~~~~~~~~------- 355 (513)
+.+++ .+..+.+|...|.+++|+|+ + .+++++.||.|++||+.... ......|...|.+++|+|.
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC------
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccc
Confidence 99986 67778889999999999997 5 66799999999999998773 3467788899999999993
Q ss_pred ------C-eEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEE
Q 010296 356 ------D-EFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSV 428 (513)
Q Consensus 356 ------~-~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~ 428 (513)
+ .+++|+.||.|++||++++.......... ..|...|+++
T Consensus 164 ~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~---------------------------------~~h~~~V~~l 210 (753)
T 3jro_A 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL---------------------------------EGHSDWVRDV 210 (753)
T ss_dssp ---CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEE---------------------------------CCCSSCEEEE
T ss_pred cccCCCCCEEEEEECCCeEEEEeccCCcccceeeeee---------------------------------cCCCCcEEEE
Confidence 4 58899999999999998874332211000 3445569999
Q ss_pred EEecC---CCEEEEecCCCcEEEEEeCCCCcce--eeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 429 TVCGG---SDLAASGAGNGSVRLWAIESETKDI--QPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 429 ~~s~~---~~~l~~g~~dg~v~vwd~~~~~~~~--~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
+|+|+ +++|++|+.||.|++||+.++.... .......|.+.|++++|+|+|++|+++ +.||.|++|++...
T Consensus 211 ~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~-s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 211 AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS-GGDNKVTLWKENLE 286 (753)
T ss_dssp EECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE-CSSSCEECCBCCSS
T ss_pred EeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEE-cCCCEEEEEecCCC
Confidence 99999 8999999999999999998863221 112223377889999999999999999 88999999998753
No 108
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.3e-32 Score=252.76 Aligned_cols=255 Identities=22% Similarity=0.327 Sum_probs=215.8
Q ss_pred cccCCCcccchhhh--hccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCC
Q 010296 142 RVQKPEATDEFRVL--LKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQ 219 (513)
Q Consensus 142 ~~~~~~~~~~~~~~--~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (513)
++|+....+.++.+ .+|...|++++|+|++++|++|+.||+|++|++.+++.+..+ .+|
T Consensus 48 ~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~-------------------~~h 108 (318)
T 4ggc_A 48 YLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM-------------------TSH 108 (318)
T ss_dssp EEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-------------------ECC
T ss_pred EEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe-------------------cCc
Confidence 46777777666655 468889999999999999999999999999999999887654 577
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-ceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCce--
Q 010296 220 SKHILALAVSSDGRYLASGGLDRHIHLWDTRIQ-EHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAY-- 296 (513)
Q Consensus 220 ~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-- 296 (513)
...+.++.+. +.+|++++.++.+++|+.... ..+..+.+|...+..+.|++++++|++++.|+.|++||+.+++.
T Consensus 109 ~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 186 (318)
T 4ggc_A 109 SARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW 186 (318)
T ss_dssp SSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBS
T ss_pred cceEEEeecC--CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccc
Confidence 8778776654 679999999999999998765 45677888999999999999999999999999999999988653
Q ss_pred --eEEeecccCCeEEEEeeCCC-eEE---EEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEE--EeCCCCE
Q 010296 297 --ISTLFGHQSEVLTIDCLRKE-RVL---TVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLS--GSDDGSI 367 (513)
Q Consensus 297 --~~~~~~~~~~v~~~~~~~~~-~~~---~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~--~~~dg~i 367 (513)
......+...|.++.+++.+ .++ +++.++.|++|+...........+...+..+.|++.+. +++ |+.|+.|
T Consensus 187 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i 266 (318)
T 4ggc_A 187 VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQL 266 (318)
T ss_dssp CCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCE
T ss_pred cceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEE
Confidence 34456678899999999864 332 45578999999999998888888888999999999875 443 4479999
Q ss_pred EEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEE
Q 010296 368 ELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVR 447 (513)
Q Consensus 368 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~ 447 (513)
+|||+.+++++..+. +|...|++++|+|++++|++|+.||+|+
T Consensus 267 ~iwd~~~~~~~~~l~-------------------------------------gH~~~V~~l~~spdg~~l~S~s~D~~v~ 309 (318)
T 4ggc_A 267 VIWKYPTMAKVAELK-------------------------------------GHTSRVLSLTMSPDGATVASAAADETLR 309 (318)
T ss_dssp EEEETTTCCEEEEEC-------------------------------------CCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred EEEECCCCcEEEEEc-------------------------------------CCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 999999999998884 3445599999999999999999999999
Q ss_pred EEEeCCC
Q 010296 448 LWAIESE 454 (513)
Q Consensus 448 vwd~~~~ 454 (513)
|||+.+.
T Consensus 310 iWd~~~~ 316 (318)
T 4ggc_A 310 LWRCFEL 316 (318)
T ss_dssp EECCSCC
T ss_pred EEECCCC
Confidence 9999764
No 109
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7e-33 Score=269.80 Aligned_cols=265 Identities=22% Similarity=0.412 Sum_probs=210.6
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCccc
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKH 222 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (513)
+|+.........+.+|.+.|++++| ++++|++|+.||+|++||+.+++.+..+ .+|...
T Consensus 157 iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~-------------------~~h~~~ 215 (435)
T 1p22_A 157 IWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTL-------------------IHHCEA 215 (435)
T ss_dssp EEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEE-------------------CCCCSC
T ss_pred EEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEE-------------------cCCCCc
Confidence 5666777788889999999999999 7889999999999999999998877654 578899
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCccee---eeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEE
Q 010296 223 ILALAVSSDGRYLASGGLDRHIHLWDTRIQEHI---QAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYIST 299 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 299 (513)
|.+++|+ +.+|++|+.||.|++||+.++..+ ..+.+|...|.+++| ++++|++++.||.|++||+.+++.+..
T Consensus 216 v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~ 291 (435)
T 1p22_A 216 VLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRT 291 (435)
T ss_dssp EEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEE
Confidence 9999997 459999999999999999988765 677889999999999 678999999999999999999999999
Q ss_pred eecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCC--
Q 010296 300 LFGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKK-- 376 (513)
Q Consensus 300 ~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~-- 376 (513)
+.+|...|.++.+. +..+++++.|+.|++||+.++..+ .+..|...+.++++ ....+++|+.||.|++||+.++.
T Consensus 292 ~~~~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~ 369 (435)
T 1p22_A 292 LNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKVWDLVAALDP 369 (435)
T ss_dssp EECCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC-CSSEEEEEETTSCEEEEEHHHHTST
T ss_pred EcCCCCcEEEEEeC-CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe-cCCEEEEEeCCCcEEEEECCCCCCc
Confidence 99999999999995 467889999999999999988766 56778889999999 34468899999999999987655
Q ss_pred -------eeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEE
Q 010296 377 -------PVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLW 449 (513)
Q Consensus 377 -------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vw 449 (513)
++..+ ..|...|++++| ++.+|++|+.||.|++|
T Consensus 370 ~~~~~~~~~~~~-------------------------------------~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iw 410 (435)
T 1p22_A 370 RAPAGTLCLRTL-------------------------------------VEHSGRVFRLQF--DEFQIVSSSHDDTILIW 410 (435)
T ss_dssp TSCTTTTEEEEE-------------------------------------CCCSSCCCCEEE--CSSCEEECCSSSEEEEE
T ss_pred cccccchheeec-------------------------------------cCCCCCeEEEEe--CCCEEEEEeCCCEEEEE
Confidence 34443 334455899999 67899999999999999
Q ss_pred EeCCCCcceeeeeecCcccEEEEEEeec
Q 010296 450 AIESETKDIQPLYNLPLVGFVNSLAFAK 477 (513)
Q Consensus 450 d~~~~~~~~~~~~~~~~~~~v~~v~~sp 477 (513)
|+.+..... ..+...+..++.|.+
T Consensus 411 d~~~~~~~~----~~~~~~~~~~~~~~~ 434 (435)
T 1p22_A 411 DFLNDPAAQ----AEPPRSPSRTYTYIS 434 (435)
T ss_dssp C---------------------------
T ss_pred ECCCCCCcc----cCCCCCCccceeeec
Confidence 998862221 112334555666554
No 110
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=5.6e-33 Score=269.76 Aligned_cols=270 Identities=17% Similarity=0.244 Sum_probs=208.6
Q ss_pred hhhhccCCCeEEEEECCC-CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC
Q 010296 153 RVLLKHRQSVTAVALSED-DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD 231 (513)
Q Consensus 153 ~~~~~h~~~V~~~~~s~~-~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 231 (513)
.....|.+.|++++|+|+ +.+|++++.+|.|+||++........ ..+...+...+.+|...|++++|+|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~---------~~~~~~~~~~~~~h~~~v~~l~~~~~ 192 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE---------PSGECQPDLRLRGHQKEGYGLSWNPN 192 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC---------TTCCCCCSEEEECCSSCCCCEEECTT
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC---------ccccCCCcEEecCCCCCeEEEEeCCC
Confidence 345689999999999997 78999999999999999976311100 00001122245688999999999999
Q ss_pred CC-EEEEEeCCCcEEEEeCCCcce-------eeeccCcCCCeEEEEEec-CCCeEEEEeCCCcEEEEeCCCC---ceeEE
Q 010296 232 GR-YLASGGLDRHIHLWDTRIQEH-------IQAFPGHRGPVSCLTFRQ-GTSELFSGSFDRTVKIWNAEDR---AYIST 299 (513)
Q Consensus 232 ~~-~l~s~~~dg~i~vwd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~---~~~~~ 299 (513)
+. +|++|+.||.|++|++.++.. ...+.+|...|.+++|+| ++.+|++++.||.|++||++++ +.+..
T Consensus 193 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~ 272 (430)
T 2xyi_A 193 LNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHT 272 (430)
T ss_dssp STTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEE
T ss_pred CCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeE
Confidence 88 999999999999999987322 456678999999999999 6778999999999999999987 56777
Q ss_pred eecccCCeEEEEeeCCCe--EEEEeCCCcEEEEecCCCe--eeEEecCCCCeeEEEeecCCe--EEEEeCCCCEEEEecC
Q 010296 300 LFGHQSEVLTIDCLRKER--VLTVGRDRSMQLWKVPEES--RLVFRAPASSLECCCFISNDE--FLSGSDDGSIELWSLL 373 (513)
Q Consensus 300 ~~~~~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~~--~~~~~~~~~~v~~~~~~~~~~--~~~~~~dg~i~iwd~~ 373 (513)
+..|...|++++|+|++. +++++.|+.|++||++... ...+..|...|.+++|+|++. |++++.||.|+|||+.
T Consensus 273 ~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 273 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp EECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred eecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 888999999999999763 6689999999999998733 346677899999999999883 7899999999999998
Q ss_pred CCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCC-EEEEecCCCcEEEEEeC
Q 010296 374 RKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSD-LAASGAGNGSVRLWAIE 452 (513)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~g~~dg~v~vwd~~ 452 (513)
............. +. ....+....|...|++++|+|+++ +|++++.||.|+||++.
T Consensus 353 ~~~~~~~~~~~~~----------------------~~-~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 353 KIGEEQSTEDAED----------------------GP-PELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp GTTCCCCHHHHHH----------------------CC-TTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CCccccCcccccc----------------------CC-cceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 7321100000000 00 000000134556699999999999 89999999999999997
Q ss_pred CC
Q 010296 453 SE 454 (513)
Q Consensus 453 ~~ 454 (513)
..
T Consensus 410 ~~ 411 (430)
T 2xyi_A 410 EN 411 (430)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 111
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.8e-33 Score=262.07 Aligned_cols=246 Identities=13% Similarity=0.165 Sum_probs=206.0
Q ss_pred CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcc---eeeeccCcCCCeEEEEEecCCC-eEEEEeCCCcEEEEeC-
Q 010296 217 TKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQE---HIQAFPGHRGPVSCLTFRQGTS-ELFSGSFDRTVKIWNA- 291 (513)
Q Consensus 217 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~- 291 (513)
.+|...|++++|+|++.+|++++.||.|++|++.++. ....+..|...|.+++|+|+++ +|++++.||.|++|++
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence 4789999999999999999999999999999998877 3445557999999999999999 9999999999999999
Q ss_pred CCCceeEEeec--ccCCeEEEEeeCCCeEEEEeCCCcEEEEecCC---------CeeeEEecCCCCeeEEEeecCCeEEE
Q 010296 292 EDRAYISTLFG--HQSEVLTIDCLRKERVLTVGRDRSMQLWKVPE---------ESRLVFRAPASSLECCCFISNDEFLS 360 (513)
Q Consensus 292 ~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~~ 360 (513)
.+++. ..+.+ |...|.+++|+|...+++++.|+.|++||+.+ ...+....+...+.+++|++++ +++
T Consensus 88 ~~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~ 165 (342)
T 1yfq_A 88 GSPSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-LIV 165 (342)
T ss_dssp SSSSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-EEE
T ss_pred cCCce-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-EEE
Confidence 77754 66778 99999999999955777999999999999987 5544444478899999999987 999
Q ss_pred EeCCCCEEEEecCC-CCee-EEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEec-CCCEE
Q 010296 361 GSDDGSIELWSLLR-KKPV-YIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCG-GSDLA 437 (513)
Q Consensus 361 ~~~dg~i~iwd~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l 437 (513)
++.++.|++||+.+ +... .... ..+...|.+++|+| ++++|
T Consensus 166 ~~~d~~i~i~d~~~~~~~~~~~~~------------------------------------~~~~~~i~~i~~~~~~~~~l 209 (342)
T 1yfq_A 166 GMNNSQVQWFRLPLCEDDNGTIEE------------------------------------SGLKYQIRDVALLPKEQEGY 209 (342)
T ss_dssp EESTTEEEEEESSCCTTCCCEEEE------------------------------------CSCSSCEEEEEECSGGGCEE
T ss_pred EeCCCeEEEEECCccccccceeee------------------------------------cCCCCceeEEEECCCCCCEE
Confidence 99999999999988 5432 2222 22333499999999 99999
Q ss_pred EEecCCCcEEEEEeCCC-----CcceeeeeecC-------cccEEEEEEeecCCCEEEEEecCCCcccccccCCCc
Q 010296 438 ASGAGNGSVRLWAIESE-----TKDIQPLYNLP-------LVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 438 ~~g~~dg~v~vwd~~~~-----~~~~~~~~~~~-------~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
++++.||.|+||++... ......+.... |...|++++|+|++++|+++ +.||.|++|+...+.
T Consensus 210 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 210 ACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA-GSDGIISCWNLQTRK 284 (342)
T ss_dssp EEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE-ETTSCEEEEETTTTE
T ss_pred EEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEe-cCCceEEEEcCccHh
Confidence 99999999999999876 24444444321 23489999999999999999 899999999987654
No 112
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.3e-33 Score=272.98 Aligned_cols=257 Identities=14% Similarity=0.158 Sum_probs=196.1
Q ss_pred ccCCCcc--cchhhhhccCCCeEEEEECC-CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCC
Q 010296 143 VQKPEAT--DEFRVLLKHRQSVTAVALSE-DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQ 219 (513)
Q Consensus 143 ~~~~~~~--~~~~~~~~h~~~V~~~~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (513)
+|+.... ..+..+.+|.+.|++|+|+| ++.+|++|+.||+|+|||+.++...... ....+
T Consensus 146 lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~-----------------~~~~~ 208 (435)
T 4e54_B 146 LWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFA-----------------SSDTI 208 (435)
T ss_dssp EECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEE-----------------CCSSC
T ss_pred EEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEe-----------------ccCCC
Confidence 4554433 23445678999999999998 6899999999999999999875443221 11234
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCC-eEEEEeCCCcEEEEeCCCCceeE
Q 010296 220 SKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTS-ELFSGSFDRTVKIWNAEDRAYIS 298 (513)
Q Consensus 220 ~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~ 298 (513)
...+.+++|+|++.+|++|+.||.|++||+. ++.+..+.+|...|++++|+|++. +|++++.|+.|++||+++.+...
T Consensus 209 ~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~ 287 (435)
T 4e54_B 209 NIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA 287 (435)
T ss_dssp SCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS
T ss_pred CccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc
Confidence 5568899999999999999999999999986 566778899999999999999886 67799999999999998866443
Q ss_pred E---eecccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeee-EEecCCC------CeeEEEeecCCe-EEEE-----
Q 010296 299 T---LFGHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRL-VFRAPAS------SLECCCFISNDE-FLSG----- 361 (513)
Q Consensus 299 ~---~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~-~~~~~~~------~v~~~~~~~~~~-~~~~----- 361 (513)
. ..+|...|.+++|+|++ .|++++.|+.|++|++.+.... .+..+.. .+..+.|+|.+. ++++
T Consensus 288 ~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 367 (435)
T 4e54_B 288 SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDP 367 (435)
T ss_dssp CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCT
T ss_pred eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCC
Confidence 3 35789999999999987 5669999999999999886654 2222221 122344555543 3333
Q ss_pred -------eCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEE-EEecC
Q 010296 362 -------SDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSV-TVCGG 433 (513)
Q Consensus 362 -------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~s~~ 433 (513)
..++.|++||..+++.+..+...+ ...|.++ +|+|+
T Consensus 368 ~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~------------------------------------~~~v~s~~~fspd 411 (435)
T 4e54_B 368 NFKSCTPYELRTIDVFDGNSGKMMCQLYDPE------------------------------------SSGISSLNEFNPM 411 (435)
T ss_dssp TSCCSSTTCCCCEEEECSSSCCEEEEECCSS------------------------------------CCCCCCEEEECTT
T ss_pred CeEEEEecCCCEEEEEECCCCcEEEEEeCCC------------------------------------CCcEEEEEEECCC
Confidence 234679999999999888775333 2337776 69999
Q ss_pred CCEEEEecCCCcEEEEEeCCC
Q 010296 434 SDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 434 ~~~l~~g~~dg~v~vwd~~~~ 454 (513)
|++|++|+ |+.|+||++.++
T Consensus 412 g~~lasg~-d~~i~iW~~~~g 431 (435)
T 4e54_B 412 GDTLASAM-GYHILIWSQQEA 431 (435)
T ss_dssp SSCEEEEC-SSEEEECCCC--
T ss_pred CCEEEEEc-CCcEEEEECCcC
Confidence 99999887 779999999886
No 113
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=6.2e-33 Score=271.42 Aligned_cols=257 Identities=13% Similarity=0.213 Sum_probs=200.8
Q ss_pred CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcc-----------eeeeccCcC------------CCeEEEEEecC
Q 010296 217 TKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQE-----------HIQAFPGHR------------GPVSCLTFRQG 273 (513)
Q Consensus 217 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~ 273 (513)
..+...|++++|+|++.+||+|+.||.|+||++.++. .+..+.+|. ..|++++|+|+
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 3567899999999999999999999999999998877 577888998 88999999999
Q ss_pred C--CeEEEEeCCCcEEEEeCCCCcee---------------------------------------EE-eecccCCeEEEE
Q 010296 274 T--SELFSGSFDRTVKIWNAEDRAYI---------------------------------------ST-LFGHQSEVLTID 311 (513)
Q Consensus 274 ~--~~l~~~~~dg~i~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~ 311 (513)
+ .+|++++.|+.|++|++.++... .. ..+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 78999999999999998764431 12 357999999999
Q ss_pred eeCCCeEEEEeCCCcEEEEecCCC-eeeE--------EecCCCCeeEEEeecCC--eEEEEeCCCCEEEEecCCCCe---
Q 010296 312 CLRKERVLTVGRDRSMQLWKVPEE-SRLV--------FRAPASSLECCCFISND--EFLSGSDDGSIELWSLLRKKP--- 377 (513)
Q Consensus 312 ~~~~~~~~~~~~d~~i~iwd~~~~-~~~~--------~~~~~~~v~~~~~~~~~--~~~~~~~dg~i~iwd~~~~~~--- 377 (513)
|+|++.+++++.|+.|++||+... .... +..|...|.+++|+|++ .|++++.||.|++||+++++.
T Consensus 185 ~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 185 INSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp ECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred EcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 999986664448999999999843 3333 34788899999999987 488999999999999999876
Q ss_pred -eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCc
Q 010296 378 -VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETK 456 (513)
Q Consensus 378 -~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~ 456 (513)
+..+........ . . ....|...|++++|+|++++|++++. |.|+|||+.....
T Consensus 265 ~~~~~~~~~~~~~-~----------------------~--~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~ 318 (447)
T 3dw8_B 265 HSKLFEEPEDPSN-R----------------------S--FFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR 318 (447)
T ss_dssp TCEEECCC------C----------------------C--HHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS
T ss_pred eeeEeccCCCccc-c----------------------c--cccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc
Confidence 455543221000 0 0 00112235999999999999999999 9999999987435
Q ss_pred ceeeeeecCccc---------------EEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 457 DIQPLYNLPLVG---------------FVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 457 ~~~~~~~~~~~~---------------~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
.+..+.. |.. .+..++|+|++++|+++ +.||.|++|++..+..
T Consensus 319 ~~~~~~~--~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~-s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 319 PVETYQV--HEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTG-SYNNFFRMFDRNTKRD 376 (447)
T ss_dssp CSCCEES--CGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEE-CSTTEEEEEETTTCCE
T ss_pred ccceeec--cccccccccccccccccccceEEEECCCCCEEEEe-ccCCEEEEEEcCCCcc
Confidence 5554443 221 13459999999999888 9999999999887643
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=4.7e-31 Score=253.33 Aligned_cols=266 Identities=12% Similarity=0.098 Sum_probs=218.1
Q ss_pred CeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEE-EEEeCCCcEEEEeCC
Q 010296 172 SKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYL-ASGGLDRHIHLWDTR 250 (513)
Q Consensus 172 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~dg~i~vwd~~ 250 (513)
.++++++.|+.|++||+.+++.+..+ .. ...+.+++|+|++++| ++++.++.|++||+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~-------------------~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~ 62 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATI-------------------PV-GSNPMGAVISPDGTKVYVANAHSNDVSIIDTA 62 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEE-------------------EC-SSSEEEEEECTTSSEEEEEEGGGTEEEEEETT
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEe-------------------ec-CCCcceEEECCCCCEEEEECCCCCeEEEEECC
Confidence 35778899999999999998877654 22 3458999999999977 677789999999999
Q ss_pred CcceeeeccCcCCCeEEEEEecCCCeEEE-EeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeCCCe-E-EEEeCCCcE
Q 010296 251 IQEHIQAFPGHRGPVSCLTFRQGTSELFS-GSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRKER-V-LTVGRDRSM 327 (513)
Q Consensus 251 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~-~~~~~d~~i 327 (513)
+++.+..+..+. .+.+++|+|++++|++ ++.++.|++||+.+++.+..+.. ...+.+++|+|++. + ++++.++.|
T Consensus 63 ~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v 140 (391)
T 1l0q_A 63 TNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTV 140 (391)
T ss_dssp TTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred CCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEE
Confidence 999988887554 8999999999998865 45679999999999988887764 45789999999885 4 466679999
Q ss_pred EEEecCCCeeeEEecCCCCeeEEEeecCCe-E-EEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCcccccc
Q 010296 328 QLWKVPEESRLVFRAPASSLECCCFISNDE-F-LSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGH 405 (513)
Q Consensus 328 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 405 (513)
++||+.+++..........+.+++|+|++. + ++++.++.|++||+.+++.+..+...
T Consensus 141 ~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--------------------- 199 (391)
T 1l0q_A 141 SVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE--------------------- 199 (391)
T ss_dssp EEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS---------------------
T ss_pred EEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecC---------------------
Confidence 999999988776555567789999999985 4 57788999999999999877766432
Q ss_pred CCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec---CCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEE
Q 010296 406 SENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA---GNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFL 482 (513)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~---~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l 482 (513)
..+.+++|+|++++|++++ .++.|++||+.++ ..+..+. ....+.+++|+|+|++|
T Consensus 200 -----------------~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~-~~~~~~~---~~~~~~~~~~s~dg~~l 258 (391)
T 1l0q_A 200 -----------------AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN-KITARIP---VGPDPAGIAVTPDGKKV 258 (391)
T ss_dssp -----------------SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT-EEEEEEE---CCSSEEEEEECTTSSEE
T ss_pred -----------------CCccceEECCCCCEEEEEecCcCCCcEEEEECCCC-eEEEEEe---cCCCccEEEEccCCCEE
Confidence 2389999999999999888 6899999999887 3333333 33457899999999999
Q ss_pred EEEecCCCcccccccCCCc
Q 010296 483 IAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 483 ~~~~~~dg~v~~W~~~~~~ 501 (513)
+++++.|+.|++|+...+.
T Consensus 259 ~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 259 YVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EEEETTTTEEEEEETTTTE
T ss_pred EEEcCCCCEEEEEECCCCc
Confidence 7766899999999987654
No 115
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.3e-32 Score=261.97 Aligned_cols=255 Identities=14% Similarity=0.105 Sum_probs=172.9
Q ss_pred CcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcce-----eeeccCcCCCeEEEEEec--------CCCeEEEEeCCCc
Q 010296 219 QSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEH-----IQAFPGHRGPVSCLTFRQ--------GTSELFSGSFDRT 285 (513)
Q Consensus 219 ~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~-----~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~dg~ 285 (513)
|...+....+++++.+|++++.|++|+|||+.++.. +..+.+|.+.|++++|+| ++++|++++.|++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence 344444555566778899999999999999987754 345789999999999998 7889999999999
Q ss_pred EEEEeCCCCceeEEeecccCCeEEEEeeCCC--eEEEEeCCCcEEEEecCCCeeeE------------------------
Q 010296 286 VKIWNAEDRAYISTLFGHQSEVLTIDCLRKE--RVLTVGRDRSMQLWKVPEESRLV------------------------ 339 (513)
Q Consensus 286 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~i~iwd~~~~~~~~------------------------ 339 (513)
|+|||+.++.++..+..|...+.+++|+|++ .+++++.|++|++||+.++....
T Consensus 168 v~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 247 (393)
T 4gq1_A 168 LIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNT 247 (393)
T ss_dssp EEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC--
T ss_pred EEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceee
Confidence 9999999988888888899999999999976 46799999999999998764321
Q ss_pred --EecCCCCeeEEEee-cCCe-EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCC
Q 010296 340 --FRAPASSLECCCFI-SNDE-FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGS 415 (513)
Q Consensus 340 --~~~~~~~v~~~~~~-~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 415 (513)
...+...+.++.|+ +++. +++++.|+++++||+..++....+........... +......
T Consensus 248 ~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~-~~~~~~~--------------- 311 (393)
T 4gq1_A 248 CHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKN-LLPNVQG--------------- 311 (393)
T ss_dssp ----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------C-CSCSEEE---------------
T ss_pred eecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEE-Ecccccc---------------
Confidence 23456678888887 5664 88999999999999998876665543222111100 0000000
Q ss_pred cCCCCCcceEEEEEEec--CCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCccc
Q 010296 416 YHSSSAYSWVSSVTVCG--GSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLG 493 (513)
Q Consensus 416 ~~~~~~~~~i~~~~~s~--~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~ 493 (513)
......+....|+| ++.++++|+.||.|+|||+.++. ....+. .|..+|++|+|+|||++||++ +.+| +.
T Consensus 312 ---~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~-~~~~~~--~~~~~V~svafspdG~~LA~a-s~~G-v~ 383 (393)
T 4gq1_A 312 ---ISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKD-SNSIPI--QLGMPIVDFCWHQDGSHLAIA-TEGS-VL 383 (393)
T ss_dssp ---ECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTT-CCEEEE--ECSSCEEEEEECTTSSEEEEE-ESSE-EE
T ss_pred ---ccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCc-EEEEec--CCCCcEEEEEEcCCCCEEEEE-eCCC-eE
Confidence 00111122334444 44577888999999999999873 333333 367899999999999999998 6665 44
Q ss_pred cccc
Q 010296 494 RWGH 497 (513)
Q Consensus 494 ~W~~ 497 (513)
+|.+
T Consensus 384 lvrL 387 (393)
T 4gq1_A 384 LTRL 387 (393)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.5e-30 Score=244.87 Aligned_cols=247 Identities=19% Similarity=0.298 Sum_probs=199.0
Q ss_pred CCCCCcccEEEEEEcCC---CCEEEEEeCCCcEEEEeCCC-ccee-eeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEE
Q 010296 215 RATKQSKHILALAVSSD---GRYLASGGLDRHIHLWDTRI-QEHI-QAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIW 289 (513)
Q Consensus 215 ~~~~~~~~v~~~~~s~~---~~~l~s~~~dg~i~vwd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 289 (513)
.+.+|...|++++|+|+ |++|++|+.||.|++|++.+ +..+ ..+.+|...|.+++|+|++++|++++.||.|++|
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 113 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMW 113 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEE
Confidence 35789999999999999 69999999999999999987 5544 7788899999999999999999999999999999
Q ss_pred eCCCCceeEEeecccCCeEEEEe--eCCCe-EEEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCeEEEEeCCCC
Q 010296 290 NAEDRAYISTLFGHQSEVLTIDC--LRKER-VLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGS 366 (513)
Q Consensus 290 d~~~~~~~~~~~~~~~~v~~~~~--~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~dg~ 366 (513)
|+.+++.+. +..|...|.+++| ++++. +++++.|+.|++||+.++...........+.++.+.+. .+++++.++.
T Consensus 114 d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 191 (368)
T 3mmy_A 114 DLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYP-MAVVATAERG 191 (368)
T ss_dssp ETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETT-EEEEEEGGGC
T ss_pred EcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCC-eeEEEeCCCc
Confidence 999988776 4569999999999 77775 66899999999999998877755555567777777654 6778889999
Q ss_pred EEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCE----EEEecC
Q 010296 367 IELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDL----AASGAG 442 (513)
Q Consensus 367 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~----l~~g~~ 442 (513)
+++|++........... ......+.++++.++... +++++.
T Consensus 192 i~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (368)
T 3mmy_A 192 LIVYQLENQPSEFRRIE-----------------------------------SPLKHQHRCVAIFKDKQNKPTGFALGSI 236 (368)
T ss_dssp EEEEECSSSCEEEEECC-----------------------------------CSCSSCEEEEEEEECTTSCEEEEEEEET
T ss_pred EEEEEeccccchhhhcc-----------------------------------ccccCCCceEEEcccCCCCCCeEEEecC
Confidence 99999987654433321 111122666666665554 999999
Q ss_pred CCcEEEEEeCCCCc--ceeeeeecCccc------------EEEEEEeecCCCEEEEEecCCCcccccccCCCc
Q 010296 443 NGSVRLWAIESETK--DIQPLYNLPLVG------------FVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 443 dg~v~vwd~~~~~~--~~~~~~~~~~~~------------~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
||.|++|++..... ....+.. |.. .|++++|+|++++|+++ +.||.|++|++..+.
T Consensus 237 dg~i~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~-~~dg~i~iwd~~~~~ 306 (368)
T 3mmy_A 237 EGRVAIHYINPPNPAKDNFTFKC--HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATV-GSDGRFSFWDKDART 306 (368)
T ss_dssp TSEEEEEESSCSCHHHHSEEEEC--SEEC----CCCEEECCEEEEEECTTTCCEEEE-ETTSCEEEEETTTTE
T ss_pred CCcEEEEecCCCCccccceeeee--eecccccccccccccceEEEEEecCCCEEEEE-ccCCeEEEEECCCCc
Confidence 99999999987632 1222222 333 69999999999999999 899999999987654
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.5e-29 Score=242.94 Aligned_cols=295 Identities=11% Similarity=0.032 Sum_probs=226.9
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECCCCCeE-EEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcc
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSEDDSKG-FSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSK 221 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l-~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (513)
+|+....+.+..+..|. .+.+++|+|++++| ++++.|++|++||+.+++.+..+ .+..
T Consensus 16 v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~--------------------~~~~ 74 (391)
T 1l0q_A 16 VIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV--------------------PAGS 74 (391)
T ss_dssp EEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE--------------------ECSS
T ss_pred EEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE--------------------ECCC
Confidence 45555566666676664 58999999999987 57778999999999998877654 2233
Q ss_pred cEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeE-EEEeCCCcEEEEeCCCCceeEE
Q 010296 222 HILALAVSSDGRYLASG-GLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSEL-FSGSFDRTVKIWNAEDRAYIST 299 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~ 299 (513)
.+.+++|+|++++|+++ +.++.|++||+.+++.+..+..+ ..+.+++|+|++++| ++++.++.|++||+.+++.+..
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 79999999999987654 46799999999999988887744 578999999999987 6788899999999999998888
Q ss_pred eecccCCeEEEEeeCCCe-E-EEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEEEe---CCCCEEEEecC
Q 010296 300 LFGHQSEVLTIDCLRKER-V-LTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLSGS---DDGSIELWSLL 373 (513)
Q Consensus 300 ~~~~~~~v~~~~~~~~~~-~-~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~---~dg~i~iwd~~ 373 (513)
+..+ ..+.+++|+|++. + ++++.++.|++||+.++.......+...+.+++|+|++. +++++ .++.|++||+.
T Consensus 154 ~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 154 VSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp EECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred EecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 7754 5579999999884 4 356678999999999988876666777899999999985 55665 68999999999
Q ss_pred CCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEE-EEecCCCcEEEEEeC
Q 010296 374 RKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLA-ASGAGNGSVRLWAIE 452 (513)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~g~~dg~v~vwd~~ 452 (513)
+++++..+..... +.+++|+|++++| ++++.|+.|++||+.
T Consensus 233 ~~~~~~~~~~~~~--------------------------------------~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 233 TNKITARIPVGPD--------------------------------------PAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp TTEEEEEEECCSS--------------------------------------EEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCeEEEEEecCCC--------------------------------------ccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 9988877754221 7899999999877 677889999999998
Q ss_pred CCCcceeeeeecCcccEE---------------EEEEeecCC---------CEEEEEecCCCcccccccCCCc
Q 010296 453 SETKDIQPLYNLPLVGFV---------------NSLAFAKSG---------QFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 453 ~~~~~~~~~~~~~~~~~v---------------~~v~~sp~~---------~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
++ ..+..+.. +..+. ....|+.+. ...++..+.+..+++|+...+.
T Consensus 275 ~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~ 344 (391)
T 1l0q_A 275 TN-TITATMAV--GKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGS 344 (391)
T ss_dssp TT-EEEEEEEC--SSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSC
T ss_pred CC-cEEEEEEC--CcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCc
Confidence 87 33333321 11111 112233322 1445555778899999986543
No 118
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=2.5e-30 Score=244.21 Aligned_cols=253 Identities=13% Similarity=0.127 Sum_probs=183.0
Q ss_pred CCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeE-EEEeCCCcEEEEeCCCC
Q 010296 216 ATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSEL-FSGSFDRTVKIWNAEDR 294 (513)
Q Consensus 216 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~ 294 (513)
...|...|++++|+|+|++|++|+.++ ++||++.+++.+.... ...+..+++.++++.+ ++++.|++|++||+.++
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~ 91 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK 91 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEEEEEETTTT
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEECCccEEEEEECCCC
Confidence 367899999999999999999998765 7899998877665543 2357888999988887 46778899999999999
Q ss_pred ceeEEeecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCC-eee-EEecCCCCeeEEEeecCCeEEE--EeCCCCEEEE
Q 010296 295 AYISTLFGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEE-SRL-VFRAPASSLECCCFISNDEFLS--GSDDGSIELW 370 (513)
Q Consensus 295 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~-~~~-~~~~~~~~v~~~~~~~~~~~~~--~~~dg~i~iw 370 (513)
+++..+. +...|.++.++++..++ +.++.|++|++.+. +.+ .+.. ....+++++ ..+++ |+.+|.|++|
T Consensus 92 ~~~~~~~-~~~~v~~v~~~~~~~~~--~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~-~~la~~sg~~~g~v~iw 164 (355)
T 3vu4_A 92 QDVSRIK-VDAPVKDLFLSREFIVV--SYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN-GLLVYSNEFNLGQIHIT 164 (355)
T ss_dssp EEEEEEE-CSSCEEEEEECSSEEEE--EETTEEEEEESSTTCCBSSCCEE---EEEEEEEET-TEEEEEESSCTTCEEEE
T ss_pred cEEEEEE-CCCceEEEEEcCCEEEE--EEcCEEEEEECCCCceeeEEecc---CCceEEEEc-cEEEEeCCCcCcEEEEE
Confidence 9988886 67799999998765433 34789999999887 433 2222 344556666 55554 6899999999
Q ss_pred ecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCc-EEEE
Q 010296 371 SLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGS-VRLW 449 (513)
Q Consensus 371 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~-v~vw 449 (513)
|+.++........... ...+.+.......|...|++++|+|+|++|++|+.||+ |+||
T Consensus 165 d~~~~~~~~~~~~~~~---------------------~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iw 223 (355)
T 3vu4_A 165 KLQSSGSATTQDQGVQ---------------------QKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVF 223 (355)
T ss_dssp ECCC---------------------------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEE
T ss_pred ECCCCCcccccccccc---------------------ccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 9988652211100000 00000000001456677999999999999999999998 9999
Q ss_pred EeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCc
Q 010296 450 AIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 450 d~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
|+.++ ..+..+..-.|.+.|++++|+|+|++|+++ +.|++|++|++....
T Consensus 224 d~~~~-~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~-s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 224 KTEDG-VLVREFRRGLDRADVVDMKWSTDGSKLAVV-SDKWTLHVFEIFNDQ 273 (355)
T ss_dssp ETTTC-CEEEEEECTTCCSCEEEEEECTTSCEEEEE-ETTCEEEEEESSCCS
T ss_pred ECCCC-cEEEEEEcCCCCCcEEEEEECCCCCEEEEE-ECCCEEEEEEccCCC
Confidence 99987 344444322278899999999999999999 899999999987653
No 119
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.7e-30 Score=245.95 Aligned_cols=243 Identities=8% Similarity=0.029 Sum_probs=188.2
Q ss_pred ccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcc-----cEEEEEEcCC
Q 010296 157 KHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSK-----HILALAVSSD 231 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~ 231 (513)
+|...|.+++|||+|.+||+++.||.|+||+..+ .+..+ . |.. .|.+++|||+
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l-------------------~-~~~~~~~~sv~svafSPD 140 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNL-------------------D-SKGNLSSRTYHCFEWNPI 140 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEEC-------------------C-CSSCSTTTCEEEEEECSS
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeec-------------------c-CCCccccccEEEEEEcCC
Confidence 5689999999999999999999999999999654 32222 2 333 5999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCcce-------eeec----cCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCce---e
Q 010296 232 GRYLASGGLDRHIHLWDTRIQEH-------IQAF----PGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAY---I 297 (513)
Q Consensus 232 ~~~l~s~~~dg~i~vwd~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~ 297 (513)
|++||+|+.||+|+||++.++.. +.++ .+|...|.+++|+|+| +++++.|++|++|++.++.. .
T Consensus 141 G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~ 218 (588)
T 2j04_A 141 ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVS 218 (588)
T ss_dssp SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCE
T ss_pred CCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccce
Confidence 99999999999999999998753 5665 6688899999999999 88999999999999988774 3
Q ss_pred EEe-ecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeeeE-EecCCCCeeEEEe--ecCCe-EEEEeCCCCEEEEec
Q 010296 298 STL-FGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRLV-FRAPASSLECCCF--ISNDE-FLSGSDDGSIELWSL 372 (513)
Q Consensus 298 ~~~-~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~-~~~~~~~v~~~~~--~~~~~-~~~~~~dg~i~iwd~ 372 (513)
.++ .+|...|.+++|+ +..+++++ ++.|++|++.++.... ..+|...+..+.| +|++. +++++.+|+ ++|..
T Consensus 219 ~tL~~~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 219 RMIQNASRRKITDLKIV-DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp EEEECCCSSCCCCEEEE-TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred eeecccccCcEEEEEEE-CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 456 4788899999999 55666665 7999999999988844 4489999999999 99996 778888999 99998
Q ss_pred CCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec
Q 010296 373 LRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA 441 (513)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~ 441 (513)
.. +. +....... .. .+..+..+......+. ...+...|.+++|||+|+++|+++
T Consensus 296 d~---~~-~spd~~l~----a~--~d~~v~lW~~~g~~l~-----~~~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 296 DE---LH-VTADNIIA----PY--LEKKFKKWSTIWNEFN-----NYETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp SS---EE-EECCCSSH----HH--HHHHHHHTTTTTTSSS-----SSCCEEEEEEEEECTTSSEEEEEE
T ss_pred cc---EE-ECCCceEE----EE--cCCEEEEEECCCCcee-----eeccceEEEEEEECCCCCEEEEEE
Confidence 72 22 33222111 11 1344444433222211 122356699999999999999886
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1e-29 Score=248.45 Aligned_cols=245 Identities=16% Similarity=0.112 Sum_probs=198.6
Q ss_pred hhhccCCCeEEEEECCCCCeE-EEEeCCceEEEEeCC--CCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC
Q 010296 154 VLLKHRQSVTAVALSEDDSKG-FSASKDGSILHWDVS--SGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS 230 (513)
Q Consensus 154 ~~~~h~~~V~~~~~s~~~~~l-~t~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 230 (513)
...+|.+.|++++|+|++++| ++|+.||.|+||++. ++..+..+ ....|...|++++|+|
T Consensus 97 ~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~-----------------~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLR-----------------KRFCFSKRPNAISIAE 159 (450)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEE-----------------EEEECSSCEEEEEECT
T ss_pred CCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeee-----------------ecccCCCCceEEEEcC
Confidence 345789999999999999996 899999999999998 77666543 1125678899999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCcceee----eccCcCCCeEEEEEecC---CCeEEEEeCCCcEEEEeCCCCceeEE-eec
Q 010296 231 DGRYLASGGLDRHIHLWDTRIQEHIQ----AFPGHRGPVSCLTFRQG---TSELFSGSFDRTVKIWNAEDRAYIST-LFG 302 (513)
Q Consensus 231 ~~~~l~s~~~dg~i~vwd~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~ 302 (513)
++++|++|+.+|.|++|++.++.... .+.+|...|++++|+|+ +++|++++.|+.|++||+.+++.+.. +.+
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 239 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFG 239 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCC
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecC
Confidence 99999999999999999998877554 77889999999999999 99999999999999999999988877 568
Q ss_pred ccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeeeEEe--------------------------cCCCCeeEEEeecC
Q 010296 303 HQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRLVFR--------------------------APASSLECCCFISN 355 (513)
Q Consensus 303 ~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~--------------------------~~~~~v~~~~~~~~ 355 (513)
|...|.+++|+ ++ .+++++.|+.|++||+.++..+... .....+..++|+|+
T Consensus 240 h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~ 318 (450)
T 2vdu_B 240 HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKN 318 (450)
T ss_dssp CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSS
T ss_pred CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCC
Confidence 99999999999 76 5669999999999999988765322 12356889999998
Q ss_pred Ce-EEEEe-CCCCEEEEec--CCC---CeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEE
Q 010296 356 DE-FLSGS-DDGSIELWSL--LRK---KPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSV 428 (513)
Q Consensus 356 ~~-~~~~~-~dg~i~iwd~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~ 428 (513)
+. +++++ .++.|+||++ ..+ +.+..+... ..|.++
T Consensus 319 ~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~--------------------------------------~~v~~~ 360 (450)
T 2vdu_B 319 LPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP--------------------------------------YNVISL 360 (450)
T ss_dssp SSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS--------------------------------------SCEEEE
T ss_pred CCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC--------------------------------------CceEEE
Confidence 86 56666 8999999999 555 444444322 339999
Q ss_pred EEecCCCEEEEecC------CCcEEEEEeCCC
Q 010296 429 TVCGGSDLAASGAG------NGSVRLWAIESE 454 (513)
Q Consensus 429 ~~s~~~~~l~~g~~------dg~v~vwd~~~~ 454 (513)
+|+|++.++++++. +..|.||.+...
T Consensus 361 ~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 361 SAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 99996544444443 556899998754
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=4.4e-31 Score=253.01 Aligned_cols=245 Identities=13% Similarity=0.092 Sum_probs=176.1
Q ss_pred hccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC-----
Q 010296 156 LKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS----- 230 (513)
Q Consensus 156 ~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~----- 230 (513)
..|...+....+++++.+|++|+.|++|+|||+.++...... +...+.+|...|++|+|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~--------------~~~~~~gH~~~v~~v~~~p~~~~~ 151 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQH--------------VLGGKSGHHNFVNDIDIADVYSAD 151 (393)
T ss_dssp C----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEE--------------EECTTTSCSSCEEEEEEEEEECTT
T ss_pred cccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceee--------------eecccCCCCCceEEEEEccccccc
Confidence 345666666677778889999999999999999887654311 1123578999999999998
Q ss_pred ---CCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCC-eEEEEeCCCcEEEEeCCCCceeEE-------
Q 010296 231 ---DGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTS-ELFSGSFDRTVKIWNAEDRAYIST------- 299 (513)
Q Consensus 231 ---~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~------- 299 (513)
++++||+|+.|++|+|||+.++..+..+..|...|.+++|+|++. +|++++.|++|++||+++++....
T Consensus 152 ~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~ 231 (393)
T 4gq1_A 152 NRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV 231 (393)
T ss_dssp CSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C
T ss_pred cCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc
Confidence 789999999999999999998888888888999999999999875 799999999999999988754322
Q ss_pred ------------------eecccCCeEEEEee-CCC-eEEEEeCCCcEEEEecCCCeee-EEecCC--------------
Q 010296 300 ------------------LFGHQSEVLTIDCL-RKE-RVLTVGRDRSMQLWKVPEESRL-VFRAPA-------------- 344 (513)
Q Consensus 300 ------------------~~~~~~~v~~~~~~-~~~-~~~~~~~d~~i~iwd~~~~~~~-~~~~~~-------------- 344 (513)
..+|...+.++.|. +++ .+++++.|+++++||+...... .+..+.
T Consensus 232 ~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 311 (393)
T 4gq1_A 232 KNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQG 311 (393)
T ss_dssp SCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEE
T ss_pred ccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccc
Confidence 13567788899987 566 5668999999999999765432 111111
Q ss_pred ----CCeeEEEeec--CCe-EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcC
Q 010296 345 ----SSLECCCFIS--NDE-FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYH 417 (513)
Q Consensus 345 ----~~v~~~~~~~--~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 417 (513)
.....+.+.+ ++. +++|+.||.|+|||+.+++++..+...
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~--------------------------------- 358 (393)
T 4gq1_A 312 ISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQL--------------------------------- 358 (393)
T ss_dssp ECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEEC---------------------------------
T ss_pred ccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCC---------------------------------
Confidence 1122223333 334 457788999999999999887766432
Q ss_pred CCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeC
Q 010296 418 SSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIE 452 (513)
Q Consensus 418 ~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~ 452 (513)
..+|.+++|+|+|++||+++.+| |.+|.+.
T Consensus 359 ----~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 359 ----GMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp ----SSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred ----CCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 23499999999999999999776 7777664
No 122
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=5.8e-30 Score=241.31 Aligned_cols=258 Identities=16% Similarity=0.170 Sum_probs=185.1
Q ss_pred cchhhhhccCCCeEEEEECC--CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEE
Q 010296 150 DEFRVLLKHRQSVTAVALSE--DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALA 227 (513)
Q Consensus 150 ~~~~~~~~h~~~V~~~~~s~--~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 227 (513)
.....+.+|...|++++|+| ++.+|++|+.||+|++||+.++........ ..+...+..|...|.+++
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~----------~~~~~~~~~~~~~v~~~~ 117 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRR----------WNKLCTLNDSKGSLYSVK 117 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCS----------EEEEEEECCCSSCEEEEE
T ss_pred eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccC----------cceeeeecccCCceeEEE
Confidence 45667789999999999999 699999999999999999988743210000 000112357889999999
Q ss_pred EcCC--CCEEEEEeCCCcEEEEeCCCcceeeecc-------------CcCCCeEEEEEecC---CCeEEEEeCCCcEEEE
Q 010296 228 VSSD--GRYLASGGLDRHIHLWDTRIQEHIQAFP-------------GHRGPVSCLTFRQG---TSELFSGSFDRTVKIW 289 (513)
Q Consensus 228 ~s~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~-------------~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iw 289 (513)
|+|+ +.+|++++.||.|++||+.+++.+..+. .|...+.+++|+|+ +.+|++++.++.+.+|
T Consensus 118 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~ 197 (351)
T 3f3f_A 118 FAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQ 197 (351)
T ss_dssp ECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEE
T ss_pred EcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEE
Confidence 9999 9999999999999999999887655443 58889999999997 8999999999999888
Q ss_pred eCCCCce--eEEeecccCCeEEEEeeCCC-----eEEEEeCCCcEEEEecCCCeeeEE-ecCCCCeeEEEeecCCe----
Q 010296 290 NAEDRAY--ISTLFGHQSEVLTIDCLRKE-----RVLTVGRDRSMQLWKVPEESRLVF-RAPASSLECCCFISNDE---- 357 (513)
Q Consensus 290 d~~~~~~--~~~~~~~~~~v~~~~~~~~~-----~~~~~~~d~~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~---- 357 (513)
+...+.. +..+.+|...|.+++|+|++ .+++++.|+.|++||+........ .............+...
T Consensus 198 ~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (351)
T 3f3f_A 198 RGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQ 277 (351)
T ss_dssp ECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------
T ss_pred ccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccc
Confidence 8887765 66778899999999999986 566999999999999987544321 11222222222222222
Q ss_pred -EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCE
Q 010296 358 -FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDL 436 (513)
Q Consensus 358 -~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 436 (513)
...+.....+.+|+....+++..+. .|...|++++|+|++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~h~~~v~~~~~s~~~~~ 320 (351)
T 3f3f_A 278 GRSDSNTEEKAELQSNLQVELLSEHD-------------------------------------DHNGEVWSVSWNLTGTI 320 (351)
T ss_dssp -------------CCSEEEEEEEEEC-------------------------------------TTSSCEEEEEECSSSCC
T ss_pred cccccccceeeeecccccccEEEEEe-------------------------------------cccccEEEEEEcCCCCE
Confidence 1223344455666655555555553 34455999999999999
Q ss_pred EEEecCCCcEEEEEeCCC
Q 010296 437 AASGAGNGSVRLWAIESE 454 (513)
Q Consensus 437 l~~g~~dg~v~vwd~~~~ 454 (513)
|++|+.||.|+||++.++
T Consensus 321 l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 321 LSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp EEEEETTSCEEEEEECTT
T ss_pred EEEecCCCcEEEEecCcC
Confidence 999999999999999987
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-30 Score=244.92 Aligned_cols=234 Identities=8% Similarity=0.031 Sum_probs=183.0
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCC---------CCce
Q 010296 226 LAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAE---------DRAY 296 (513)
Q Consensus 226 ~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---------~~~~ 296 (513)
..+.+++.+|++|+.||.|++||+.+++.+..+. ...|.++.|+|. +++++.|++|++|+.. +++.
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 3445678899999999999999999999888776 567888889887 9999999999999765 4444
Q ss_pred eEEee-cccCCeEEEEeeC--CC-eEEEEeCCCcEEEEecCCCeeeEEe--cCCCCeeEEEeecCCe-EEEEeCCCCEEE
Q 010296 297 ISTLF-GHQSEVLTIDCLR--KE-RVLTVGRDRSMQLWKVPEESRLVFR--APASSLECCCFISNDE-FLSGSDDGSIEL 369 (513)
Q Consensus 297 ~~~~~-~~~~~v~~~~~~~--~~-~~~~~~~d~~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~-~~~~~~dg~i~i 369 (513)
+..+. +|...|.+++|+| ++ .+++++.|+.|++||+.++...... .+...+.+++|+|++. |++|+.||.|+|
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 44443 5678899999999 77 4558999999999999988876433 4455799999999996 668899999999
Q ss_pred EecCCCCee-EEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEE
Q 010296 370 WSLLRKKPV-YIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRL 448 (513)
Q Consensus 370 wd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~v 448 (513)
||+++++.+ ..+.. .|..+|++++|+|++.+|++++ ++.|+|
T Consensus 197 wd~~~~~~~~~~~~~------------------------------------~h~~~v~~l~fs~~g~~l~s~~-~~~v~i 239 (343)
T 3lrv_A 197 YNLSSPDQASSRFPV------------------------------------DEEAKIKEVKFADNGYWMVVEC-DQTVVC 239 (343)
T ss_dssp EESSCTTSCCEECCC------------------------------------CTTSCEEEEEECTTSSEEEEEE-SSBEEE
T ss_pred EECCCCCCCccEEec------------------------------------cCCCCEEEEEEeCCCCEEEEEe-CCeEEE
Confidence 999998876 55542 2445599999999999999999 559999
Q ss_pred EEeCCCCcceeeeeec-CcccEE--EEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 449 WAIESETKDIQPLYNL-PLVGFV--NSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 449 wd~~~~~~~~~~~~~~-~~~~~v--~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
||+++.. .+..+..+ .+...+ .+++|+|+|++|+++++.|+.|++|++....+
T Consensus 240 wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 240 FDLRKDV-GTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp EETTSST-TCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred EEcCCCC-cceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccccc
Confidence 9998873 32222221 122333 46999999999999955599999998866544
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=2.2e-29 Score=226.63 Aligned_cols=252 Identities=13% Similarity=0.080 Sum_probs=175.9
Q ss_pred ccCCCcc---cchhhhhccCCCeEEEEECCCCCeEEEEe-CC-ceEEEEeCC--CC--ccccccCCChhhhccCCCCCCC
Q 010296 143 VQKPEAT---DEFRVLLKHRQSVTAVALSEDDSKGFSAS-KD-GSILHWDVS--SG--KGVKYLWPSEEVLKSHGAKDPQ 213 (513)
Q Consensus 143 ~~~~~~~---~~~~~~~~h~~~V~~~~~s~~~~~l~t~~-~d-g~v~iwd~~--~~--~~~~~~~~~~~~~~~~~~~~~~ 213 (513)
+|.+... .+++++..|..+|..|.|.||-.-|++.. .. ..-.|+-+. .. .....+
T Consensus 67 lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l---------------- 130 (356)
T 2w18_A 67 LWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVL---------------- 130 (356)
T ss_dssp EEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEE----------------
T ss_pred EcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEE----------------
Confidence 4554444 88999999999999999999654333221 11 001111111 00 000000
Q ss_pred CCCCCCcccEEEEEEcCCCCEEEEEe--CCCcEEEEeC-CCcceeeeccCcCCCeEEEEEec---CCCeEEEEeCCCcEE
Q 010296 214 GRATKQSKHILALAVSSDGRYLASGG--LDRHIHLWDT-RIQEHIQAFPGHRGPVSCLTFRQ---GTSELFSGSFDRTVK 287 (513)
Q Consensus 214 ~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~i~vwd~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~ 287 (513)
...+|...|..+ ++++++.+++ .++.|++|++ .+++.+..+.+|...+..++|++ ++.+|++++.|++|+
T Consensus 131 -~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIk 206 (356)
T 2w18_A 131 -LKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIV 206 (356)
T ss_dssp -EEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEE
T ss_pred -EeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEE
Confidence 012233334443 4555555543 5999999999 55888888889999999999999 779999999999999
Q ss_pred EEeCCCCceeEEeecccC---CeEEEEeeCCCeEE-------------EEeCCCcEEEEecCCCeeeEEe------cCCC
Q 010296 288 IWNAEDRAYISTLFGHQS---EVLTIDCLRKERVL-------------TVGRDRSMQLWKVPEESRLVFR------APAS 345 (513)
Q Consensus 288 iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~-------------~~~~d~~i~iwd~~~~~~~~~~------~~~~ 345 (513)
|||+.+++++.++.+|.. .+.+++|+|++.++ +++.|++|++||..++..+... +|..
T Consensus 207 IWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~ 286 (356)
T 2w18_A 207 IWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAG 286 (356)
T ss_dssp EEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCC
T ss_pred EEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcc
Confidence 999999999999986543 57778999998653 5678999999999988765322 3333
Q ss_pred CeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceE
Q 010296 346 SLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWV 425 (513)
Q Consensus 346 ~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i 425 (513)
.+.+..++ ...+++++.|++|+|||+.+++++.++..++.. .+
T Consensus 287 ~~lsg~~s-g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~------------------------------------vv 329 (356)
T 2w18_A 287 RFLEGDVK-DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQ------------------------------------HW 329 (356)
T ss_dssp CEEEEEEE-TTEEEEEETTSCEEEEETTTCSEEEEECCC--C------------------------------------CC
T ss_pred eeEccccC-CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCC------------------------------------eE
Confidence 33333333 224779999999999999999999998643321 14
Q ss_pred EEEEEecCCCEEEEecCCCcEEEEEe
Q 010296 426 SSVTVCGGSDLAASGAGNGSVRLWAI 451 (513)
Q Consensus 426 ~~~~~s~~~~~l~~g~~dg~v~vwd~ 451 (513)
.+++|+|+|++|++|+.|++|+|||+
T Consensus 330 s~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 330 SFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEECCCCCEEEEEECCCcEEEecC
Confidence 56899999999999999999999996
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=4.7e-28 Score=235.75 Aligned_cols=241 Identities=10% Similarity=0.075 Sum_probs=204.4
Q ss_pred hhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCC
Q 010296 154 VLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGR 233 (513)
Q Consensus 154 ~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 233 (513)
.+.+|.+.|.+++|+|++.++++++.|+.|++||+.+++.+..+ ..|...+.+++|+|+++
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~ 224 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATV-------------------DLTGKWSKILLYDPIRD 224 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE-------------------ECSSSSEEEEEEETTTT
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE-------------------cCCCCCeeEEEEcCCCC
Confidence 56789999999999999999999999999999999988776644 46778899999999999
Q ss_pred EEEE-EeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEe--------CCCcEEEEeCCCCceeEEeeccc
Q 010296 234 YLAS-GGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGS--------FDRTVKIWNAEDRAYISTLFGHQ 304 (513)
Q Consensus 234 ~l~s-~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~dg~i~iwd~~~~~~~~~~~~~~ 304 (513)
++++ ++.++.|++||+.+++.+..+..+ ..+.+++|+|++++|++++ .|+.|++||+.+++.+..+ .+.
T Consensus 225 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~ 302 (433)
T 3bws_A 225 LVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPP 302 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEE
T ss_pred EEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCC
Confidence 8854 457999999999999988888754 4599999999999999887 4889999999998877665 366
Q ss_pred CCeEEEEeeCCC-eEE-EEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEEEeC---------------CCC
Q 010296 305 SEVLTIDCLRKE-RVL-TVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLSGSD---------------DGS 366 (513)
Q Consensus 305 ~~v~~~~~~~~~-~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~---------------dg~ 366 (513)
..+.+++|+|++ .++ +++.++.|++|++.++.......+...+.+++|+|++. +++++. ||.
T Consensus 303 ~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~ 382 (433)
T 3bws_A 303 GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK 382 (433)
T ss_dssp ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE
Confidence 688999999988 454 55789999999999888776666778899999999996 556555 579
Q ss_pred EEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecC-CCc
Q 010296 367 IELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAG-NGS 445 (513)
Q Consensus 367 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~-dg~ 445 (513)
|++||+.+++.+..+.... .+.+++|+|+|++|++++. |+.
T Consensus 383 v~~~d~~~~~~~~~~~~~~--------------------------------------~~~~~~~s~dg~~l~~~~~~d~~ 424 (433)
T 3bws_A 383 VYVIDTTTDTVKEFWEAGN--------------------------------------QPTGLDVSPDNRYLVISDFLDHQ 424 (433)
T ss_dssp EEEEETTTTEEEEEEECSS--------------------------------------SEEEEEECTTSCEEEEEETTTTE
T ss_pred EEEEECCCCcEEEEecCCC--------------------------------------CCceEEEcCCCCEEEEEECCCCe
Confidence 9999999998888775421 2899999999999988764 999
Q ss_pred EEEEEeCC
Q 010296 446 VRLWAIES 453 (513)
Q Consensus 446 v~vwd~~~ 453 (513)
|++|++..
T Consensus 425 i~v~~~~~ 432 (433)
T 3bws_A 425 IRVYRRDG 432 (433)
T ss_dssp EEEEEETT
T ss_pred EEEEEecC
Confidence 99999864
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=9.1e-28 Score=216.10 Aligned_cols=273 Identities=14% Similarity=0.095 Sum_probs=171.8
Q ss_pred eEEEEECCCCC---eEEEEeCCceEEEEeCCCC---ccccccCCChh-hhccCCCCCCC-----CCCCCCcccEEEEEEc
Q 010296 162 VTAVALSEDDS---KGFSASKDGSILHWDVSSG---KGVKYLWPSEE-VLKSHGAKDPQ-----GRATKQSKHILALAVS 229 (513)
Q Consensus 162 V~~~~~s~~~~---~l~t~~~dg~v~iwd~~~~---~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~v~~~~~s 229 (513)
+.++.|-.-+- .+++++. .+|++|+..++ +.++++..... .+......... ..-.-+...|.+|+|+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 55666654433 5667775 78999999988 44444311110 00000000000 0001123345555556
Q ss_pred CC----CCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEe--CCCcEEEEeC-CCCceeEEeec
Q 010296 230 SD----GRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGS--FDRTVKIWNA-EDRAYISTLFG 302 (513)
Q Consensus 230 ~~----~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~-~~~~~~~~~~~ 302 (513)
|+ +.++++++. .+.+|++ ++++++.+++ .|+.|++|++ .+++.+..+.+
T Consensus 121 pd~~~~~~~l~s~g~--~~~v~~l----------------------~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~ 176 (356)
T 2w18_A 121 SDDESEKQVLLKSGN--IKAVLGL----------------------TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFL 176 (356)
T ss_dssp -----CCEEEEEEEE--EEEEEEE----------------------TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEE
T ss_pred CCccccccEEEeCCC--eEEEEec----------------------CCCcEEEecccCCCCcEEEEEECCCCceeeeecc
Confidence 55 555555542 2444533 3444444433 5888888888 44777777888
Q ss_pred ccCCeEEEEeeC---CC-eEEEEeCCCcEEEEecCCCeee-EEecCC---CCeeEEEeecCCeE-------------EEE
Q 010296 303 HQSEVLTIDCLR---KE-RVLTVGRDRSMQLWKVPEESRL-VFRAPA---SSLECCCFISNDEF-------------LSG 361 (513)
Q Consensus 303 ~~~~v~~~~~~~---~~-~~~~~~~d~~i~iwd~~~~~~~-~~~~~~---~~v~~~~~~~~~~~-------------~~~ 361 (513)
|...+..++|++ ++ .+++++.|++|++||+.+++.+ .+..+. ..+.+++|+|++.+ ++|
T Consensus 177 ~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSG 256 (356)
T 2w18_A 177 MPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLR 256 (356)
T ss_dssp CCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-----------
T ss_pred CCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeecc
Confidence 999999999988 44 5668899999999999998876 444433 36777899999963 457
Q ss_pred eCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec
Q 010296 362 SDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA 441 (513)
Q Consensus 362 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~ 441 (513)
+.|++|++||..+++.+..+....+ .+|...+.+..++ +.++++|+
T Consensus 257 s~D~tIklWd~~tgk~l~v~~~~~p--------------------------------~Gh~~~~lsg~~s--g~~lASgS 302 (356)
T 2w18_A 257 SPVFQLIVINPKTTLSVGVMLYCLP--------------------------------PGQAGRFLEGDVK--DHCAAAIL 302 (356)
T ss_dssp -CCEEEEEEETTTTEEEEEEEECCC--------------------------------TTCCCCEEEEEEE--TTEEEEEE
T ss_pred CCCcEEEEEECCCCEEEEEEEeecc--------------------------------CCCcceeEccccC--CCEEEEEc
Confidence 8899999999999988776532111 1222223344444 78999999
Q ss_pred CCCcEEEEEeCCCCcceeeeeecCcccE-EEEEEeecCCCEEEEEecCCCccccccc
Q 010296 442 GNGSVRLWAIESETKDIQPLYNLPLVGF-VNSLAFAKSGQFLIAGVGQEPRLGRWGH 497 (513)
Q Consensus 442 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~-v~~v~~sp~~~~l~~~~~~dg~v~~W~~ 497 (513)
.||+|+|||+.++ +.+..+.. |... +.+++|||||++|++| +.|++|+||+.
T Consensus 303 ~DgTIkIWDl~tG-k~l~tL~g--H~~~vvs~vafSPDG~~LaSG-S~D~TIklWd~ 355 (356)
T 2w18_A 303 TSGTIAIWDLLLG-QCTALLPP--VSDQHWSFVKWSGTDSHLLAG-QKDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEETTTC-SEEEEECC--C--CCCCEEEECSSSSEEEEE-CTTSCEEEEEE
T ss_pred CCCcEEEEECCCC-cEEEEecC--CCCCeEEEEEECCCCCEEEEE-ECCCcEEEecC
Confidence 9999999999998 44455443 5544 4568999999999999 89999999985
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=8.7e-27 Score=231.20 Aligned_cols=300 Identities=13% Similarity=0.057 Sum_probs=227.1
Q ss_pred ccCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeC--CCCccccccCCChhhhccCCCCCCCCCCCCCc
Q 010296 143 VQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDV--SSGKGVKYLWPSEEVLKSHGAKDPQGRATKQS 220 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (513)
+|+....+.+.++..+.. +.+++|+|+|++|++++.|++|.+||+ .+++.+..+ .+.
T Consensus 163 v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i--------------------~~g 221 (543)
T 1nir_A 163 LVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI--------------------KIG 221 (543)
T ss_dssp EEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE--------------------ECC
T ss_pred EEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEE--------------------ecC
Confidence 355566666667763333 899999999999999999999999999 777766544 234
Q ss_pred ccEEEEEEcC----CCCEEEEEeC-CCcEEEEeCCCcceeeeccCc----------CC-CeEEEEEecCCCe-EEEEeCC
Q 010296 221 KHILALAVSS----DGRYLASGGL-DRHIHLWDTRIQEHIQAFPGH----------RG-PVSCLTFRQGTSE-LFSGSFD 283 (513)
Q Consensus 221 ~~v~~~~~s~----~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~----------~~-~v~~~~~~~~~~~-l~~~~~d 283 (513)
..+..++|+| +|++|++++. +++|.|||..+++++..+..+ .. .+.++.++|++.. +++...+
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~ 301 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET 301 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC
Confidence 5689999999 9999999884 899999999999988877642 23 7899999998766 4566778
Q ss_pred CcEEEEeCCCCceeE--EeecccCCeEEEEeeCCCe-EEEEe-CCCcEEEEecCCCeeeEEec-----CCCCeeEEEeec
Q 010296 284 RTVKIWNAEDRAYIS--TLFGHQSEVLTIDCLRKER-VLTVG-RDRSMQLWKVPEESRLVFRA-----PASSLECCCFIS 354 (513)
Q Consensus 284 g~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~~~~~-~d~~i~iwd~~~~~~~~~~~-----~~~~v~~~~~~~ 354 (513)
+.|.+||+.+.+.+. .+ .+...+..+.|+|+++ +++++ .+++|.+||+.+++...... |......+ ++|
T Consensus 302 g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p 379 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHP 379 (543)
T ss_dssp TEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EET
T ss_pred CeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCC
Confidence 999999998866543 33 3566788999999986 44444 58899999999988764322 33223333 466
Q ss_pred C-Ce-EEEEe-CCCCEEEEecCC-------CCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcce
Q 010296 355 N-DE-FLSGS-DDGSIELWSLLR-------KKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSW 424 (513)
Q Consensus 355 ~-~~-~~~~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 424 (513)
+ +. ++++. .+++|.+|++.+ .+.+.++.... ..
T Consensus 380 ~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g-------------------------------------~~ 422 (543)
T 1nir_A 380 KYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQG-------------------------------------GG 422 (543)
T ss_dssp TTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC-------------------------------------SC
T ss_pred CCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCC-------------------------------------CC
Confidence 6 45 45554 589999999998 78888876432 22
Q ss_pred EEEEEEecCCCEEEEec-------CCCcEEEEEeCCCCcceeeeee------cCcccEEEEEEeecCCCEEEEEec----
Q 010296 425 VSSVTVCGGSDLAASGA-------GNGSVRLWAIESETKDIQPLYN------LPLVGFVNSLAFAKSGQFLIAGVG---- 487 (513)
Q Consensus 425 i~~~~~s~~~~~l~~g~-------~dg~v~vwd~~~~~~~~~~~~~------~~~~~~v~~v~~sp~~~~l~~~~~---- 487 (513)
+..++|+|++++|++++ .+++|.|||+.+.......+.. ..+...+..++|+|+|+.|+++..
T Consensus 423 ~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~ 502 (543)
T 1nir_A 423 SLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKN 502 (543)
T ss_dssp CCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTT
T ss_pred ceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCC
Confidence 67899999999999987 2679999999988543233210 124678999999999999997742
Q ss_pred CCCcccccccCCCcc
Q 010296 488 QEPRLGRWGHLPAAR 502 (513)
Q Consensus 488 ~dg~v~~W~~~~~~~ 502 (513)
.++.|.+||..+...
T Consensus 503 ~~~~i~v~D~~t~~~ 517 (543)
T 1nir_A 503 DSSALVVVDDKTLKL 517 (543)
T ss_dssp SCCEEEEEETTTTEE
T ss_pred CCCeEEEEECCCceE
Confidence 579999999887753
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=3.9e-27 Score=226.86 Aligned_cols=276 Identities=9% Similarity=-0.003 Sum_probs=211.6
Q ss_pred eccccCC--Ccccch--hhhhccCCCeEEEEECC--------------CCCeEEEEeCC------ceEEEEeCCCCcccc
Q 010296 140 ASRVQKP--EATDEF--RVLLKHRQSVTAVALSE--------------DDSKGFSASKD------GSILHWDVSSGKGVK 195 (513)
Q Consensus 140 ~~~~~~~--~~~~~~--~~~~~h~~~V~~~~~s~--------------~~~~l~t~~~d------g~v~iwd~~~~~~~~ 195 (513)
.-++|+. ...+.+ ..+.+|...+..+++++ .+..++.++.+ +.|++||+.... ..
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~ 172 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYN-QF 172 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCS-CE
T ss_pred EEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCC-CE
Confidence 3466777 666655 45888988888888775 25666666554 799999997543 33
Q ss_pred ccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCC---cEEEEeCCCcceeeeccCcCCCeEEEEEec
Q 010296 196 YLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDR---HIHLWDTRIQEHIQAFPGHRGPVSCLTFRQ 272 (513)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 272 (513)
. +..|...|.+++|+|+|++|++++.++ .|++||+.+++.. .+..|...+.+++|+|
T Consensus 173 ~-------------------l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~sp 232 (415)
T 2hqs_A 173 V-------------------VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSP 232 (415)
T ss_dssp E-------------------EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECT
T ss_pred E-------------------EeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcC
Confidence 2 246788899999999999999999875 9999999988875 4566888999999999
Q ss_pred CCCeEE-EEeCCCc--EEEEeCCCCceeEEeecccCCeEEEEeeCCCe-EEEEeC-CC--cEEEEecCCCeeeEEecCCC
Q 010296 273 GTSELF-SGSFDRT--VKIWNAEDRAYISTLFGHQSEVLTIDCLRKER-VLTVGR-DR--SMQLWKVPEESRLVFRAPAS 345 (513)
Q Consensus 273 ~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~-d~--~i~iwd~~~~~~~~~~~~~~ 345 (513)
+|++|+ +++.++. |++||+.+++. ..+..|...+.+++|+|++. +++++. ++ .|++|++.++....+..+..
T Consensus 233 dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~ 311 (415)
T 2hqs_A 233 DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGS 311 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSS
T ss_pred CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCC
Confidence 999888 6666655 99999998775 56677888999999999986 555554 44 68888998877665556667
Q ss_pred CeeEEEeecCCe-EEEEeCC---CCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCC
Q 010296 346 SLECCCFISNDE-FLSGSDD---GSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSA 421 (513)
Q Consensus 346 ~v~~~~~~~~~~-~~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 421 (513)
.+.+++|+|+|. |++++.+ ..|++||+.+++.. .+....
T Consensus 312 ~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~------------------------------------ 354 (415)
T 2hqs_A 312 QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF------------------------------------ 354 (415)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS------------------------------------
T ss_pred cccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC------------------------------------
Confidence 888999999996 5555543 58999999988763 222111
Q ss_pred cceEEEEEEecCCCEEEEecCCC---cEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCC
Q 010296 422 YSWVSSVTVCGGSDLAASGAGNG---SVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQ 480 (513)
Q Consensus 422 ~~~i~~~~~s~~~~~l~~g~~dg---~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~ 480 (513)
.+.+++|+|+|++|++++.++ .|++||+... ....+.. +.+.|.+++|+|--.
T Consensus 355 --~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~--~~~~l~~--~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 355 --LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR--FKARLPA--TDGQVKFPAWSPYLH 410 (415)
T ss_dssp --SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC--CEEECCC--SSSEEEEEEECCCCC
T ss_pred --CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC--cEEEeeC--CCCCCcCCccccccc
Confidence 289999999999999988776 7999998754 3344433 778999999999643
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.4e-27 Score=229.93 Aligned_cols=280 Identities=11% Similarity=0.016 Sum_probs=209.0
Q ss_pred CCCeEEEEECCCCC-eEEEEe----CCc----eEEEEeC--CCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEE
Q 010296 159 RQSVTAVALSEDDS-KGFSAS----KDG----SILHWDV--SSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALA 227 (513)
Q Consensus 159 ~~~V~~~~~s~~~~-~l~t~~----~dg----~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 227 (513)
...|...+|.+.+. ++++|+ .+| +|+|||+ .+++.+... .+.+|...+..++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~-----------------~~~~~~~~~~~~~ 124 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQN-----------------SYKVNKQWLRYAG 124 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEE-----------------EEEECGGGHHHHH
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeee-----------------EEEcChhHHHHHH
Confidence 35678888888775 555776 467 8999999 888765321 1245555566665
Q ss_pred EcC--------------CCCEEEEEeCC------CcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCC---
Q 010296 228 VSS--------------DGRYLASGGLD------RHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDR--- 284 (513)
Q Consensus 228 ~s~--------------~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--- 284 (513)
+++ .+..++.++.+ +.|++||+.. .....+..|...+.+++|+|+|++|++++.++
T Consensus 125 ~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~ 203 (415)
T 2hqs_A 125 HTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRS 203 (415)
T ss_dssp HHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred HHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCc
Confidence 554 25566665544 7999999974 55677778999999999999999999999875
Q ss_pred cEEEEeCCCCceeEEeecccCCeEEEEeeCCCe-EE-EEeCCC--cEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EE
Q 010296 285 TVKIWNAEDRAYISTLFGHQSEVLTIDCLRKER-VL-TVGRDR--SMQLWKVPEESRLVFRAPASSLECCCFISNDE-FL 359 (513)
Q Consensus 285 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~-~~~~d~--~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~ 359 (513)
.|++||+.+++.. .+..+...+.+++|+|++. ++ +++.++ .|++||+.++....+..+...+.+++|+|+|. |+
T Consensus 204 ~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~ 282 (415)
T 2hqs_A 204 ALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLA 282 (415)
T ss_dssp EEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEE
T ss_pred EEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEE
Confidence 9999999998775 4666888999999999986 44 445554 49999999888777777888899999999996 66
Q ss_pred EEeC-CC--CEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCE
Q 010296 360 SGSD-DG--SIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDL 436 (513)
Q Consensus 360 ~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 436 (513)
+++. ++ .|.+||+.+++... +. .+...+.+++|+|+|++
T Consensus 283 ~~s~~~g~~~i~~~d~~~~~~~~-l~-------------------------------------~~~~~~~~~~~spdG~~ 324 (415)
T 2hqs_A 283 FTSDQAGRPQVYKVNINGGAPQR-IT-------------------------------------WEGSQNQDADVSSDGKF 324 (415)
T ss_dssp EEECTTSSCEEEEEETTSSCCEE-CC-------------------------------------CSSSEEEEEEECTTSSE
T ss_pred EEECCCCCcEEEEEECCCCCEEE-Ee-------------------------------------cCCCcccCeEECCCCCE
Confidence 6654 45 57777887776322 21 12234889999999999
Q ss_pred EEEecCC---CcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCC--cccccccCCC
Q 010296 437 AASGAGN---GSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEP--RLGRWGHLPA 500 (513)
Q Consensus 437 l~~g~~d---g~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg--~v~~W~~~~~ 500 (513)
|++++.+ +.|++||+.++. ...+.. + ..+.+++|+|+|++|++++.+++ .|.+|+....
T Consensus 325 l~~~~~~~g~~~i~~~d~~~~~--~~~l~~--~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 325 MVMVSSNGGQQHIAKQDLATGG--VQVLSS--T-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp EEEEEECSSCEEEEEEETTTCC--EEECCC--S-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred EEEEECcCCceEEEEEECCCCC--EEEecC--C-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 9988764 589999998872 223322 2 37899999999999999855444 7899987644
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=2.1e-26 Score=228.46 Aligned_cols=281 Identities=14% Similarity=0.122 Sum_probs=217.1
Q ss_pred EECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEE
Q 010296 166 ALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIH 245 (513)
Q Consensus 166 ~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~ 245 (513)
+|+|++.++++++.+++|.+||..+++.+..+ ..++. +.+++|+|+|++|++++.++.|.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i------------------~~g~~--~~~v~~spdg~~l~v~~~d~~V~ 203 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVI------------------DTGYA--VHISRMSASGRYLLVIGRDARID 203 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEE------------------ECSTT--EEEEEECTTSCEEEEEETTSEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEE------------------ecCcc--cceEEECCCCCEEEEECCCCeEE
Confidence 48999999999999999999999999887765 11232 88999999999999999999999
Q ss_pred EEeC--CCcceeeeccCcCCCeEEEEEec----CCCeEEEEe-CCCcEEEEeCCCCceeEEeecc----------c-CCe
Q 010296 246 LWDT--RIQEHIQAFPGHRGPVSCLTFRQ----GTSELFSGS-FDRTVKIWNAEDRAYISTLFGH----------Q-SEV 307 (513)
Q Consensus 246 vwd~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~----------~-~~v 307 (513)
+||+ .+++++..+. +...+..++|+| ++++|++++ .+++|.+||..+++++..+..+ . ..+
T Consensus 204 v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v 282 (543)
T 1nir_A 204 MIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV 282 (543)
T ss_dssp EEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCE
T ss_pred EEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCce
Confidence 9999 8888888887 455689999999 999999887 4899999999999988877642 2 268
Q ss_pred EEEEeeCCC-eEE-EEeCCCcEEEEecCCCeeeE--EecCCCCeeEEEeecCCe-EE-EEeCCCCEEEEecCCCCeeEEe
Q 010296 308 LTIDCLRKE-RVL-TVGRDRSMQLWKVPEESRLV--FRAPASSLECCCFISNDE-FL-SGSDDGSIELWSLLRKKPVYIV 381 (513)
Q Consensus 308 ~~~~~~~~~-~~~-~~~~d~~i~iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~-~~-~~~~dg~i~iwd~~~~~~~~~~ 381 (513)
.++.+++++ .++ +...++.|.+||+.+...+. ...+...+..+.|+|+++ |+ ++..+++|.+||+.+++++..+
T Consensus 283 ~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i 362 (543)
T 1nir_A 283 AAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALV 362 (543)
T ss_dssp EEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEee
Confidence 899999965 444 56678999999998754332 334556788899999997 44 4556899999999999988887
Q ss_pred ecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecC-CCEEEEec-CCCcEEEEEeCCC-----
Q 010296 382 KNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGG-SDLAASGA-GNGSVRLWAIESE----- 454 (513)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~g~-~dg~v~vwd~~~~----- 454 (513)
.... ..|......+ ++|+ +.+++++. .|++|.||++.+.
T Consensus 363 ~~g~---------------------------------~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~ 408 (543)
T 1nir_A 363 DVGK---------------------------------TPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQY 408 (543)
T ss_dssp ECSS---------------------------------SBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTT
T ss_pred ccCC---------------------------------CCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchh
Confidence 6421 1122112223 5776 66777775 6899999999872
Q ss_pred -CcceeeeeecCcccEEEEEEeecCCCEEEEEe--c----CCCcccccccCCCccc
Q 010296 455 -TKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGV--G----QEPRLGRWGHLPAARN 503 (513)
Q Consensus 455 -~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~--~----~dg~v~~W~~~~~~~~ 503 (513)
-+.++.+.. +.+.+..|+|+|+|++|+++. + .+++|.+||+.+....
T Consensus 409 ~~~~v~~l~~--~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 409 AWKKVAELQG--QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp BTSEEEEEEC--SCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred cCeEEEEEEc--CCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 133444443 456678899999999999984 1 2679999999877643
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=2.6e-26 Score=239.00 Aligned_cols=302 Identities=11% Similarity=0.050 Sum_probs=214.6
Q ss_pred CCCeEEEEECCCCCeEEEEeC-Cc-----eEEEEeCCCCccccccCCChhh-----hccCCCCCCCCCCCCCcccEEEEE
Q 010296 159 RQSVTAVALSEDDSKGFSASK-DG-----SILHWDVSSGKGVKYLWPSEEV-----LKSHGAKDPQGRATKQSKHILALA 227 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~-dg-----~v~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~ 227 (513)
...|.+++|+|||++|++++. |+ .|++||+.+++....+...... +..................|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 567999999999999999998 88 9999999998765443110000 000000000000000013478999
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCcc--eeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccC
Q 010296 228 VSSDGRYLASGGLDRHIHLWDTRIQE--HIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQS 305 (513)
Q Consensus 228 ~s~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 305 (513)
|||||++|++++. +.|++||+.++. .+..+..|...+.+++|+|+|++|+.++ ++.|++||+.+++.......+..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcc
Confidence 9999999999986 999999999873 4556677888999999999999999887 46999999998876654443333
Q ss_pred C----------------eEEEEeeCCCe-EEEEeCCC---------------------------------cEEEEecCC-
Q 010296 306 E----------------VLTIDCLRKER-VLTVGRDR---------------------------------SMQLWKVPE- 334 (513)
Q Consensus 306 ~----------------v~~~~~~~~~~-~~~~~~d~---------------------------------~i~iwd~~~- 334 (513)
. +.++.|+|+++ +++++.++ .|++||+.+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 2 47899999985 55665554 788999988
Q ss_pred CeeeEEe---cCCCCeeEEEeecCCe-EEEEe-----CCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCcccccc
Q 010296 335 ESRLVFR---APASSLECCCFISNDE-FLSGS-----DDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGH 405 (513)
Q Consensus 335 ~~~~~~~---~~~~~v~~~~~~~~~~-~~~~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 405 (513)
+...... .+...+..++| |+|. |++++ .+..|++||+.+++....+......
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~------------------ 334 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPT------------------ 334 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSS------------------
T ss_pred CceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCC------------------
Confidence 7655443 35567889999 9986 55443 3567999999999877665432210
Q ss_pred CCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEE-EeecCCCEEEE
Q 010296 406 SENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSL-AFAKSGQFLIA 484 (513)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v-~~sp~~~~l~~ 484 (513)
....+..++|+|+|+++++++.+|.++||.+..... ...+.. +...|..+ .|+|+|+.|++
T Consensus 335 ---------------~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~--~~~~v~~~~~~s~dg~~l~~ 396 (741)
T 2ecf_A 335 ---------------WVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTH--GNWSVDELLAVDEKAGLAYF 396 (741)
T ss_dssp ---------------CCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCC--SSSCEEEEEEEETTTTEEEE
T ss_pred ---------------cCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeee--cceEEEeEeEEeCCCCEEEE
Confidence 000156789999999999999999999998874323 444433 55667777 59999998887
Q ss_pred EecCCC--cccccccCC
Q 010296 485 GVGQEP--RLGRWGHLP 499 (513)
Q Consensus 485 ~~~~dg--~v~~W~~~~ 499 (513)
+++.++ .++||.+..
T Consensus 397 ~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 397 RAGIESARESQIYAVPL 413 (741)
T ss_dssp EECSSCTTCBEEEEEET
T ss_pred EEeCCCCceEEEEEEEc
Confidence 757776 899998754
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=1.1e-25 Score=210.67 Aligned_cols=277 Identities=10% Similarity=0.051 Sum_probs=202.3
Q ss_pred EEECCCCCe-EEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeC-CC
Q 010296 165 VALSEDDSK-GFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGL-DR 242 (513)
Q Consensus 165 ~~~s~~~~~-l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg 242 (513)
..|.+++.+ +++++.++.|.+||+.+++....+ ..+...+ +++|+|++++|++++. ++
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~-------------------~~~~~~~-~~~~s~dg~~l~~~~~~~~ 62 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQI-------------------TLGYDFV-DTAITSDCSNVVVTSDFCQ 62 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEE-------------------ECCCCEE-EEEECSSSCEEEEEESTTC
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeE-------------------EccCCcc-eEEEcCCCCEEEEEeCCCC
Confidence 345666555 567888999999999998876644 2234456 9999999997776665 88
Q ss_pred cEEEEeCCCcce-eeeccCcCCCeEEEEEecCCCeEEEEeCCC---cEEEEeCCCCceeEEeecccCCeEEEEeeCCCe-
Q 010296 243 HIHLWDTRIQEH-IQAFPGHRGPVSCLTFRQGTSELFSGSFDR---TVKIWNAEDRAYISTLFGHQSEVLTIDCLRKER- 317 (513)
Q Consensus 243 ~i~vwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~- 317 (513)
.|.+||+.+++. ...+..+..+..+++|+|++++|+++..++ .|.+||+.+++.+..+.. ...+.+++|+|+++
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~ 141 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNG 141 (331)
T ss_dssp EEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSC
T ss_pred eEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCE
Confidence 999999999987 777776766666699999999999655553 899999999988877764 45578999999985
Q ss_pred EEEE-eCCCc-EEEEecCCCeee-----EEecCCCCeeEEEeecCCe-EE-EEeCCCCEEEEecCCCCe---eEEeecCC
Q 010296 318 VLTV-GRDRS-MQLWKVPEESRL-----VFRAPASSLECCCFISNDE-FL-SGSDDGSIELWSLLRKKP---VYIVKNAH 385 (513)
Q Consensus 318 ~~~~-~~d~~-i~iwd~~~~~~~-----~~~~~~~~v~~~~~~~~~~-~~-~~~~dg~i~iwd~~~~~~---~~~~~~~~ 385 (513)
++++ ..++. |.+|++.....+ ........+..++|+|++. ++ ++..++.|.+||+.+++. +..+...
T Consensus 142 l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~- 220 (331)
T 3u4y_A 142 LILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN- 220 (331)
T ss_dssp EEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-
T ss_pred EEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-
Confidence 5544 45588 999998754332 2224455688999999996 44 555789999999999887 5555422
Q ss_pred CcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec-CCCcEEEEEeCCCCcc-eeeeee
Q 010296 386 PLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA-GNGSVRLWAIESETKD-IQPLYN 463 (513)
Q Consensus 386 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~-~dg~v~vwd~~~~~~~-~~~~~~ 463 (513)
..+..++|+|+|++|++++ .++.|.+||+.++... +..+..
T Consensus 221 -------------------------------------~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~ 263 (331)
T 3u4y_A 221 -------------------------------------NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGH 263 (331)
T ss_dssp -------------------------------------SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEEC
T ss_pred -------------------------------------CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccccc
Confidence 1267899999999776554 5788999999887220 111111
Q ss_pred c----C-cccEEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 464 L----P-LVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 464 ~----~-~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
. + ....+..++|+|+|++|++++..++.|.+|++...
T Consensus 264 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 264 GLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp CCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred ccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 0 0 11123568999999999888788889999998654
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=1.7e-25 Score=210.38 Aligned_cols=278 Identities=11% Similarity=0.170 Sum_probs=192.4
Q ss_pred CeEE-EEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCC-CcEEEEeC
Q 010296 172 SKGF-SASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLD-RHIHLWDT 249 (513)
Q Consensus 172 ~~l~-t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-g~i~vwd~ 249 (513)
.+++ +++.++.|++|++........+ ....|...+.+++|+|++++|++++.+ +.|.+|++
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~ 67 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLT-----------------QVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRI 67 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEE-----------------EEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEe-----------------eeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEe
Confidence 3444 4478999999999632211111 012455678899999999999988876 99999998
Q ss_pred C--Ccc--eeeeccCcCCCeEEEEEecCCCeEEEEeC-CCcEEEEeCC---CCceeEEeecccCCeEEEEeeCCCe-EEE
Q 010296 250 R--IQE--HIQAFPGHRGPVSCLTFRQGTSELFSGSF-DRTVKIWNAE---DRAYISTLFGHQSEVLTIDCLRKER-VLT 320 (513)
Q Consensus 250 ~--~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~---~~~~~~~~~~~~~~v~~~~~~~~~~-~~~ 320 (513)
. ++. .+..+..+. .+..++|+|++++|++++. ++.|.+|++. +...+..+. ....+.+++|+|++. +++
T Consensus 68 ~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~ 145 (343)
T 1ri6_A 68 APDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWV 145 (343)
T ss_dssp CTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEE
T ss_pred cCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEE
Confidence 7 554 344455443 7889999999998876665 8889999994 334444444 344688999999985 556
Q ss_pred Ee-CCCcEEEEecCC-Ceee-----EEe-cCCCCeeEEEeecCCe-EE-EEeCCCCEEEEecCC--CCe--eEEeecCCC
Q 010296 321 VG-RDRSMQLWKVPE-ESRL-----VFR-APASSLECCCFISNDE-FL-SGSDDGSIELWSLLR--KKP--VYIVKNAHP 386 (513)
Q Consensus 321 ~~-~d~~i~iwd~~~-~~~~-----~~~-~~~~~v~~~~~~~~~~-~~-~~~~dg~i~iwd~~~--~~~--~~~~~~~~~ 386 (513)
++ .++.|++|++.+ +... ... .....+..++|+|++. ++ ++..++.|.+|++.. ++. ...+.....
T Consensus 146 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~ 225 (343)
T 1ri6_A 146 PALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPE 225 (343)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCT
T ss_pred ecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCc
Confidence 66 789999999987 4432 122 2345788899999996 44 455889999999954 432 222211000
Q ss_pred cccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEE-EecCCCcEEEEEeCCCCcceeeeeecC
Q 010296 387 LLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAA-SGAGNGSVRLWAIESETKDIQPLYNLP 465 (513)
Q Consensus 387 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~g~~dg~v~vwd~~~~~~~~~~~~~~~ 465 (513)
. ......+..++|+|++++|+ ++..++.|++|++.........+..++
T Consensus 226 ~-------------------------------~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~ 274 (343)
T 1ri6_A 226 N-------------------------------FSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP 274 (343)
T ss_dssp T-------------------------------CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE
T ss_pred c-------------------------------ccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec
Confidence 0 01122378899999998777 455789999999984322333343333
Q ss_pred cccEEEEEEeecCCCEEEEEecCCCcccccccCC
Q 010296 466 LVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLP 499 (513)
Q Consensus 466 ~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~ 499 (513)
....+.+++|+|+|++|++++..++.|.+|++..
T Consensus 275 ~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 275 TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred CCCccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 3334889999999999999966889999996653
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=2.3e-24 Score=203.60 Aligned_cols=268 Identities=11% Similarity=0.079 Sum_probs=208.0
Q ss_pred cCCCeEEEEECCCCCeEEEEeC-------CceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC
Q 010296 158 HRQSVTAVALSEDDSKGFSASK-------DGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS 230 (513)
Q Consensus 158 h~~~V~~~~~s~~~~~l~t~~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 230 (513)
....+..++|+|++++|++++. ++.|.+||..+++.+..+ .....+..++|+|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~--------------------~~~~~~~~~~~s~ 98 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI--------------------HNDLKPFGATINN 98 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE--------------------EESSCCCSEEEET
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE--------------------ecCCCcceEEECC
Confidence 4567899999999999988774 578999999998876654 1223467799999
Q ss_pred CCCEEEEE-eCCCcEEEEeCCCcceeeeccCcCCC---------eEEEEEecCCCeEEEEe--CCCcEEEEeCCCCceeE
Q 010296 231 DGRYLASG-GLDRHIHLWDTRIQEHIQAFPGHRGP---------VSCLTFRQGTSELFSGS--FDRTVKIWNAEDRAYIS 298 (513)
Q Consensus 231 ~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~ 298 (513)
++++++++ ..++.|.+||+.+++.+..+..+... +.+++|+|+++++++++ .++.|.+||+.+++.+.
T Consensus 99 dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~ 178 (353)
T 3vgz_A 99 TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT 178 (353)
T ss_dssp TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE
T ss_pred CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE
Confidence 99966554 55799999999999988877654432 78899999999888766 47889999999999888
Q ss_pred EeecccCCeEEEEeeCCCe-EEEEeCCCcEEEEecCCCeeeEEe-c----CCCCeeEEEeecCCe-EE-EEeCCCCEEEE
Q 010296 299 TLFGHQSEVLTIDCLRKER-VLTVGRDRSMQLWKVPEESRLVFR-A----PASSLECCCFISNDE-FL-SGSDDGSIELW 370 (513)
Q Consensus 299 ~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~-~----~~~~v~~~~~~~~~~-~~-~~~~dg~i~iw 370 (513)
.+..+...+.++.|+|++. +++++.++.|.+||+.++...... . +...+..++|+|++. ++ +...++.|.+|
T Consensus 179 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 258 (353)
T 3vgz_A 179 AIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVV 258 (353)
T ss_dssp EECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEE
T ss_pred EecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEE
Confidence 8775666688999999875 667788999999999988776332 2 345677899999985 44 44456999999
Q ss_pred ecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec-CCCcEEEE
Q 010296 371 SLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA-GNGSVRLW 449 (513)
Q Consensus 371 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~-~dg~v~vw 449 (513)
|+.+++.+..+.... ...++|+|+++++++++ .++.|.+|
T Consensus 259 d~~~~~~~~~~~~~~---------------------------------------~~~~~~s~dg~~l~v~~~~~~~v~~~ 299 (353)
T 3vgz_A 259 DTRNGNILAKVAAPE---------------------------------------SLAVLFNPARNEAYVTHRQAGKVSVI 299 (353)
T ss_dssp ETTTCCEEEEEECSS---------------------------------------CCCEEEETTTTEEEEEETTTTEEEEE
T ss_pred ECCCCcEEEEEEcCC---------------------------------------CceEEECCCCCEEEEEECCCCeEEEE
Confidence 999999887776321 24589999999655554 78999999
Q ss_pred EeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecC
Q 010296 450 AIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQ 488 (513)
Q Consensus 450 d~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~ 488 (513)
|+.++ +.+.. +.....+.+++|+|+|++|+++...
T Consensus 300 d~~~~-~~~~~---~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 300 DAKSY-KVVKT---FDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ETTTT-EEEEE---EECCSEEEEEEECTTSCEEEEEEEC
T ss_pred ECCCC-eEEEE---EecCCCCCeEEEcCCCCEEEEEEcc
Confidence 99887 33332 2345578999999999988887443
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=5.3e-25 Score=202.26 Aligned_cols=254 Identities=9% Similarity=-0.022 Sum_probs=188.5
Q ss_pred EEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-cce
Q 010296 176 SASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRI-QEH 254 (513)
Q Consensus 176 t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~-~~~ 254 (513)
+++.+++|++||+.+++.... ..|...|.+++|+|++++|++++ ++.|++||+.+ ++.
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~--------------------~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~ 75 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVV--------------------WQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP 75 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEE--------------------EEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC
T ss_pred CCCcceeEEEEeCCCCceeee--------------------ccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc
Confidence 446789999999998876542 35778899999999999999987 78999999999 887
Q ss_pred eeeccCc-CCCeEEEEEecCCCeEEEEeC--CC--cEEEEeCCCCceeEEeecccCCeEEEEeeCCCe-EE-EEeCCCcE
Q 010296 255 IQAFPGH-RGPVSCLTFRQGTSELFSGSF--DR--TVKIWNAEDRAYISTLFGHQSEVLTIDCLRKER-VL-TVGRDRSM 327 (513)
Q Consensus 255 ~~~~~~~-~~~v~~~~~~~~~~~l~~~~~--dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~-~~~~d~~i 327 (513)
...+..+ ...+.+++|+|++++|++++. ++ .|.+|++.++. ...+. +...+..+.|+|++. ++ ++..++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~ 153 (297)
T 2ojh_A 76 EKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT-KNLPSYWHGWSPDGKSFTYCGIRDQVF 153 (297)
T ss_dssp EECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC-SSSSEEEEEECTTSSEEEEEEEETTEE
T ss_pred eEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee-cCCCccceEECCCCCEEEEEECCCCce
Confidence 7766665 367899999999999999883 34 44555555554 33444 333588999999885 44 56778989
Q ss_pred EEEec--CCCeeeEEecCCCCeeEEEeecCCe-EEEEe-CCCCEEEEecC-CCCeeEEeecCCCcccCCCCcccCcCccc
Q 010296 328 QLWKV--PEESRLVFRAPASSLECCCFISNDE-FLSGS-DDGSIELWSLL-RKKPVYIVKNAHPLLDGLKNFEQDEGKIS 402 (513)
Q Consensus 328 ~iwd~--~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 402 (513)
.+|++ .+.....+..+...+.+++|+|++. +++++ .++.++||++. .+..+..+.
T Consensus 154 ~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~-------------------- 213 (297)
T 2ojh_A 154 DIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT-------------------- 213 (297)
T ss_dssp EEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC--------------------
T ss_pred EEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe--------------------
Confidence 99985 4455556666777899999999996 55444 68999999986 344444432
Q ss_pred cccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCC-----------CcEEEEEeCCCCcceeeeeecCcccEEE
Q 010296 403 NGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGN-----------GSVRLWAIESETKDIQPLYNLPLVGFVN 471 (513)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d-----------g~v~vwd~~~~~~~~~~~~~~~~~~~v~ 471 (513)
.+...+.+++|+|++++|++++.+ +.|++||+.++. .........+...+.
T Consensus 214 -----------------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~~~~~~~~~~~~~ 275 (297)
T 2ojh_A 214 -----------------DSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN-VETLFDLFGGQGTMN 275 (297)
T ss_dssp -----------------CCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS-CEEEEEEEESTTTSC
T ss_pred -----------------cCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC-ceeeeccCCCCcccc
Confidence 222348999999999999988765 569999998762 222222223567789
Q ss_pred EEEeecCCCEEEEEecCCC
Q 010296 472 SLAFAKSGQFLIAGVGQEP 490 (513)
Q Consensus 472 ~v~~sp~~~~l~~~~~~dg 490 (513)
+++|+|+|++|++++.+++
T Consensus 276 ~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 276 SPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp SCCBCTTSSEEEEEEECCC
T ss_pred cceECCCCCEEEEEEeccC
Confidence 9999999999998855553
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=3.4e-25 Score=230.01 Aligned_cols=281 Identities=9% Similarity=0.044 Sum_probs=199.9
Q ss_pred CCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcc---cEEEEEEcCCCCEEE
Q 010296 160 QSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSK---HILALAVSSDGRYLA 236 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~ 236 (513)
..+.+++|+|+|+++++ +.||+|++||+.+++....+ ..|.. .|.+++|||||++|+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~-------------------~~~~~~~~~v~~~~~SpDg~~l~ 76 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLI-------------------EGKKIESLRAIRYEISPDREYAL 76 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEE-------------------CTTTTTTTTCSEEEECTTSSEEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEe-------------------ccccccccccceEEECCCCCEEE
Confidence 34788999999998877 78999999999988765543 22222 489999999999999
Q ss_pred EEeCC---------CcEEEEeCCCcce--eeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccC
Q 010296 237 SGGLD---------RHIHLWDTRIQEH--IQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQS 305 (513)
Q Consensus 237 s~~~d---------g~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 305 (513)
+++.+ +.|++||+.+++. +.....|...+..++|+|+|+.|+.++. +.|++|++.+++.......+..
T Consensus 77 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~ 155 (723)
T 1xfd_A 77 FSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKE 155 (723)
T ss_dssp EEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBT
T ss_pred EEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCC
Confidence 99764 7888999998876 2223345556889999999999998886 7999999999877665554443
Q ss_pred Ce------------------EEEEeeCCCe-EEEEeCCC----------------------------------cEEEEec
Q 010296 306 EV------------------LTIDCLRKER-VLTVGRDR----------------------------------SMQLWKV 332 (513)
Q Consensus 306 ~v------------------~~~~~~~~~~-~~~~~~d~----------------------------------~i~iwd~ 332 (513)
.+ .++.|+|+++ |++++.++ .|++||+
T Consensus 156 ~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~ 235 (723)
T 1xfd_A 156 GVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGL 235 (723)
T ss_dssp TTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEES
T ss_pred CceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEEC
Confidence 33 7899999985 44555332 7999999
Q ss_pred CCCee-eEEecC------CCCeeEEEeecCCeEE-EEe----CCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCc
Q 010296 333 PEESR-LVFRAP------ASSLECCCFISNDEFL-SGS----DDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGK 400 (513)
Q Consensus 333 ~~~~~-~~~~~~------~~~v~~~~~~~~~~~~-~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (513)
.++.. ..+..+ ...+..++|+|+|+++ +.+ .+..|++||+.+++....+...+.
T Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~-------------- 301 (723)
T 1xfd_A 236 NGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESE-------------- 301 (723)
T ss_dssp SSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECS--------------
T ss_pred CCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccC--------------
Confidence 88764 333333 4568889999999744 443 235799999999887665543221
Q ss_pred cccccCCCCCCCCCCcCCCCCcceE----EEEEEecCCCEEEE--ecCCC------cEEEEEeCCCCcc--eeeeeecCc
Q 010296 401 ISNGHSENGNLNPGSYHSSSAYSWV----SSVTVCGGSDLAAS--GAGNG------SVRLWAIESETKD--IQPLYNLPL 466 (513)
Q Consensus 401 i~~~~~~~~~~~~~~~~~~~~~~~i----~~~~~s~~~~~l~~--g~~dg------~v~vwd~~~~~~~--~~~~~~~~~ 466 (513)
.++ ..++|+|+|+.|+. +..++ .|++|++...... ...+.. +
T Consensus 302 ----------------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~--~ 357 (723)
T 1xfd_A 302 ----------------------AWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITS--G 357 (723)
T ss_dssp ----------------------SCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCC--S
T ss_pred ----------------------CEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeec--C
Confidence 112 36799999997775 44666 4666663233120 233321 2
Q ss_pred ccEEE-EEEeecCCCEEEEEecCC--CcccccccCC
Q 010296 467 VGFVN-SLAFAKSGQFLIAGVGQE--PRLGRWGHLP 499 (513)
Q Consensus 467 ~~~v~-~v~~sp~~~~l~~~~~~d--g~v~~W~~~~ 499 (513)
...+. .++|+|+|++|+.++..+ +.++||.+..
T Consensus 358 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 358 DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 23344 479999999998775666 8899998754
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=1.3e-24 Score=203.70 Aligned_cols=268 Identities=10% Similarity=0.023 Sum_probs=195.6
Q ss_pred CeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcc-cEEEEEEcCCCCEEE-EEeCCCcEEEEeC
Q 010296 172 SKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSK-HILALAVSSDGRYLA-SGGLDRHIHLWDT 249 (513)
Q Consensus 172 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~-s~~~dg~i~vwd~ 249 (513)
.+|++++.++.|.+||+.+++.+..+. .++.. .+..++|+|++++++ ++..++.|.+||+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~------------------~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 63 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVIT------------------IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEE------------------CTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEE------------------cCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEEC
Confidence 478999999999999999988766440 11111 377899999998664 5556789999999
Q ss_pred CCcceeeeccC-c----CCCeEEEEEecCCCeEEEEe------------CCCcEEEEeCCCCceeEEeecccCCeEEEEe
Q 010296 250 RIQEHIQAFPG-H----RGPVSCLTFRQGTSELFSGS------------FDRTVKIWNAEDRAYISTLFGHQSEVLTIDC 312 (513)
Q Consensus 250 ~~~~~~~~~~~-~----~~~v~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 312 (513)
.+++.+..+.. + ...+.+++|+|++++|++++ .++.|.+||+.+++.+..+.. ...+.+++|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~ 142 (337)
T 1pby_B 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAW 142 (337)
T ss_dssp TTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEE
T ss_pred CCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEE
Confidence 99988776653 1 22677899999999998886 579999999999888777664 456788999
Q ss_pred eCCCeEEEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEEEe-CCC-----------------------CE
Q 010296 313 LRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLSGS-DDG-----------------------SI 367 (513)
Q Consensus 313 ~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~-~dg-----------------------~i 367 (513)
+|++..+..+ ++.|++||+.++..............+.|+|++. ++..+ .++ .|
T Consensus 143 s~dg~~l~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (337)
T 1pby_B 143 ARDGSKLYGL-GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221 (337)
T ss_dssp CTTSSCEEEE-SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred CCCCCEEEEe-CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccce
Confidence 9998644333 6899999999887664332222111236788775 33222 222 46
Q ss_pred EEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEE
Q 010296 368 ELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVR 447 (513)
Q Consensus 368 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~ 447 (513)
.+||+.+++.. .+.. ..+...+.+++|+|++++|+++ ++.|+
T Consensus 222 ~~~d~~~~~~~-~~~~-----------------------------------~~~~~~~~~~~~s~dg~~l~~~--~~~v~ 263 (337)
T 1pby_B 222 LTMDLETGEMA-MREV-----------------------------------RIMDVFYFSTAVNPAKTRAFGA--YNVLE 263 (337)
T ss_dssp EEEETTTCCEE-EEEE-----------------------------------EECSSCEEEEEECTTSSEEEEE--ESEEE
T ss_pred EEEeCCCCCce-Eeec-----------------------------------CCCCCceeeEEECCCCCEEEEe--CCeEE
Confidence 89999888765 3221 1111237889999999999988 78999
Q ss_pred EEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 448 LWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 448 vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
+||+.++ +.+..+. ....+.+++|+|+|++|+++ +.++.|.+|+...+..
T Consensus 264 ~~d~~~~-~~~~~~~---~~~~~~~~~~s~dg~~l~~~-~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 264 SFDLEKN-ASIKRVP---LPHSYYSVNVSTDGSTVWLG-GALGDLAAYDAETLEK 313 (337)
T ss_dssp EEETTTT-EEEEEEE---CSSCCCEEEECTTSCEEEEE-SBSSEEEEEETTTCCE
T ss_pred EEECCCC-cCcceec---CCCceeeEEECCCCCEEEEE-cCCCcEEEEECcCCcE
Confidence 9999886 3333222 33557899999999999998 7799999999877653
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=1.9e-24 Score=223.67 Aligned_cols=277 Identities=10% Similarity=0.001 Sum_probs=200.2
Q ss_pred CCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEe
Q 010296 160 QSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGG 239 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 239 (513)
..|.+++|+|+ .+++.+. ++.|++||+.+++.... ..+...+.+++|||+|++|+++
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l--------------------~~~~~~~~~~~~SpdG~~la~~- 138 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYL--------------------FDTNEETASLDFSPVGDRVAYV- 138 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEE--------------------ECCTTCCTTCEECTTSSEEEEE-
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEc--------------------cCCcccccCCcCCCCCCEEEEE-
Confidence 57999999999 6666554 59999999988765432 2345567889999999999996
Q ss_pred CCCcEEEEeCCC-----cceeeeccCcCCC--------------eEEEEEecCCCeEEEEe-------------------
Q 010296 240 LDRHIHLWDTRI-----QEHIQAFPGHRGP--------------VSCLTFRQGTSELFSGS------------------- 281 (513)
Q Consensus 240 ~dg~i~vwd~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~------------------- 281 (513)
.++.|++|++.+ ++.......+... +.++.|+|+|++|++++
T Consensus 139 ~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~ 218 (706)
T 2z3z_A 139 RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEA 218 (706)
T ss_dssp ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSC
T ss_pred ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCC
Confidence 579999999998 7766555444433 48899999999999887
Q ss_pred --------------CCCcEEEEeCCCCceeEEee--cccCCeEEEEeeCCCe-EEEEeCCC-----cEEEEecCCC-eee
Q 010296 282 --------------FDRTVKIWNAEDRAYISTLF--GHQSEVLTIDCLRKER-VLTVGRDR-----SMQLWKVPEE-SRL 338 (513)
Q Consensus 282 --------------~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~-~~~~~~d~-----~i~iwd~~~~-~~~ 338 (513)
.+..|++||+.+++...... .+...+.+++|+|++. +++++.++ .|++||+.++ ...
T Consensus 219 ~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~ 298 (706)
T 2z3z_A 219 ESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVR 298 (706)
T ss_dssp EEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEE
T ss_pred ceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceee
Confidence 44679999999887654432 4566789999999986 55655554 8999999987 433
Q ss_pred EEe--cCCC---CeeEEEeec--CCe-EEEEeCCCCEEEEecC-CCCeeEEeecCCCcccCCCCcccCcCccccccCCCC
Q 010296 339 VFR--APAS---SLECCCFIS--NDE-FLSGSDDGSIELWSLL-RKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENG 409 (513)
Q Consensus 339 ~~~--~~~~---~v~~~~~~~--~~~-~~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 409 (513)
... .... .+..+.|+| +|. ++++..++.++||.+. +++.+..+...
T Consensus 299 ~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~------------------------- 353 (706)
T 2z3z_A 299 TLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKG------------------------- 353 (706)
T ss_dssp EEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCS-------------------------
T ss_pred EEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCC-------------------------
Confidence 222 2221 246789999 987 5577788999999876 55555554321
Q ss_pred CCCCCCcCCCCCcceEEE-EEEecCCCEEEEec-CCC----cEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEE
Q 010296 410 NLNPGSYHSSSAYSWVSS-VTVCGGSDLAASGA-GNG----SVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLI 483 (513)
Q Consensus 410 ~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~g~-~dg----~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~ 483 (513)
...+.. ++|+|+++.|+.++ .++ .|+.|++.++ ....+ .+...+.+++|||+|++|+
T Consensus 354 ------------~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~--~~~~l---~~~~~~~~~~~spdg~~l~ 416 (706)
T 2z3z_A 354 ------------EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG--KTKDL---TPESGMHRTQLSPDGSAII 416 (706)
T ss_dssp ------------SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC--CCEES---CCSSSEEEEEECTTSSEEE
T ss_pred ------------CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC--Cceec---cCCCceEEEEECCCCCEEE
Confidence 122655 79999998776554 444 5555665554 22323 2556689999999999998
Q ss_pred EEecCC---CcccccccCCCc
Q 010296 484 AGVGQE---PRLGRWGHLPAA 501 (513)
Q Consensus 484 ~~~~~d---g~v~~W~~~~~~ 501 (513)
.+++.+ +.|.+|+...+.
T Consensus 417 ~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 417 DIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEECSSCSCEEEEEESSSCE
T ss_pred EEecCCCCCcEEEEEECCCCe
Confidence 775544 569999987654
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=3.1e-24 Score=223.43 Aligned_cols=273 Identities=11% Similarity=0.126 Sum_probs=200.2
Q ss_pred CeEEEEECCCCCeEEEEeCCceEEEEeCCCC---ccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEE
Q 010296 161 SVTAVALSEDDSKGFSASKDGSILHWDVSSG---KGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLAS 237 (513)
Q Consensus 161 ~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 237 (513)
.|.+++|||||++|++++. +.|++||+.++ .... +..|...+.+++|||+|++|++
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~--------------------l~~~~~~~~~~~~SPDG~~la~ 168 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQ--------------------LTHGEGFATDAKLSPKGGFVSF 168 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCB--------------------CCCSSSCEEEEEECTTSSEEEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEE--------------------cccCCcccccccCCCCCCEEEE
Confidence 3899999999999999887 99999999987 3322 2456778999999999999999
Q ss_pred EeCCCcEEEEeCCCcceeeeccCcCCC----------------eEEEEEecCCCeEEEEeCCC-----------------
Q 010296 238 GGLDRHIHLWDTRIQEHIQAFPGHRGP----------------VSCLTFRQGTSELFSGSFDR----------------- 284 (513)
Q Consensus 238 ~~~dg~i~vwd~~~~~~~~~~~~~~~~----------------v~~~~~~~~~~~l~~~~~dg----------------- 284 (513)
++ ++.|++||+.+++.......+... +.+++|+|+|++|++++.|+
T Consensus 169 ~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~ 247 (741)
T 2ecf_A 169 IR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTD 247 (741)
T ss_dssp EE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEE
T ss_pred Ee-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCccc
Confidence 88 568999999988776655544432 47899999999999987765
Q ss_pred ----------------cEEEEeCCC-CceeEEee--cccCCeEEEEeeCCCeEE-EEe-----CCCcEEEEecCCCeeeE
Q 010296 285 ----------------TVKIWNAED-RAYISTLF--GHQSEVLTIDCLRKERVL-TVG-----RDRSMQLWKVPEESRLV 339 (513)
Q Consensus 285 ----------------~i~iwd~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~~-~~~-----~d~~i~iwd~~~~~~~~ 339 (513)
.|++||+.+ ++...... .|...+..++| |++..+ +++ .+..|++||+.++....
T Consensus 248 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~ 326 (741)
T 2ecf_A 248 VIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRV 326 (741)
T ss_dssp EEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEE
T ss_pred ceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEE
Confidence 789999988 77654433 36778899999 998544 443 25789999999877653
Q ss_pred Ee-cCCC----CeeEEEeecCCe-EEEEeCCCCEEEEecC-CCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCC
Q 010296 340 FR-APAS----SLECCCFISNDE-FLSGSDDGSIELWSLL-RKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLN 412 (513)
Q Consensus 340 ~~-~~~~----~v~~~~~~~~~~-~~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 412 (513)
.. .+.. .+..++|+|+|. +++++.+|.++||.+. .++ ...+..
T Consensus 327 ~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~----------------------------- 376 (741)
T 2ecf_A 327 LAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTH----------------------------- 376 (741)
T ss_dssp EEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCC-----------------------------
T ss_pred EEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeee-----------------------------
Confidence 32 2221 346789999997 5577888988888775 333 433322
Q ss_pred CCCcCCCCCcceEEEE-EEecCCCEEE-EecCCC--cEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecC
Q 010296 413 PGSYHSSSAYSWVSSV-TVCGGSDLAA-SGAGNG--SVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQ 488 (513)
Q Consensus 413 ~~~~~~~~~~~~i~~~-~~s~~~~~l~-~g~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~ 488 (513)
+...+..+ .|+|+++.|+ +++.++ .++||++.........+. ....+.+++|||||++|+..++.
T Consensus 377 --------~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~---~~~~~~~~~~spdg~~l~~~~~~ 445 (741)
T 2ecf_A 377 --------GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLS---KAPGMHSASFARNASVYVDSWSN 445 (741)
T ss_dssp --------SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECC---CSCSEEEEEECTTSSEEEEEEEE
T ss_pred --------cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecc---cCCCceEEEECCCCCEEEEEecC
Confidence 12227676 5999998775 455555 899999975433334333 24557899999999998877554
Q ss_pred C---Cccccccc
Q 010296 489 E---PRLGRWGH 497 (513)
Q Consensus 489 d---g~v~~W~~ 497 (513)
. +.+.+|+.
T Consensus 446 ~~~p~~~~l~~~ 457 (741)
T 2ecf_A 446 NSTPPQIELFRA 457 (741)
T ss_dssp TTEEEEEEEEET
T ss_pred CCCCCeEEEEEc
Confidence 3 35677765
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=6.4e-24 Score=220.45 Aligned_cols=294 Identities=10% Similarity=0.029 Sum_probs=203.6
Q ss_pred ccCCCcccchhhhhccCC---CeEEEEECCCCCeEEEEeCC---------ceEEEEeCCCCccccccCCChhhhccCCCC
Q 010296 143 VQKPEATDEFRVLLKHRQ---SVTAVALSEDDSKGFSASKD---------GSILHWDVSSGKGVKYLWPSEEVLKSHGAK 210 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~---~V~~~~~s~~~~~l~t~~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 210 (513)
+|+.........+.+|.. .|.+++|||||++|++++.+ +.|.+||+.+++... +
T Consensus 41 ~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-l------------- 106 (723)
T 1xfd_A 41 LWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQS-L------------- 106 (723)
T ss_dssp EBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEE-C-------------
T ss_pred EEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEe-c-------------
Confidence 455555555566666665 49999999999999999764 788899999887521 1
Q ss_pred CCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCe------------------EEEEEec
Q 010296 211 DPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPV------------------SCLTFRQ 272 (513)
Q Consensus 211 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v------------------~~~~~~~ 272 (513)
.....|...+.+++|||+|++||+++. +.|++|++.+++.......+...+ .+++|+|
T Consensus 107 ---~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp 182 (723)
T 1xfd_A 107 ---DPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP 182 (723)
T ss_dssp ---CCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT
T ss_pred ---cCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC
Confidence 012345556889999999999999985 799999999888776655544433 7899999
Q ss_pred CCCeEEEEeCCC----------------------------------cEEEEeCCCCceeEEeecc------cCCeEEEEe
Q 010296 273 GTSELFSGSFDR----------------------------------TVKIWNAEDRAYISTLFGH------QSEVLTIDC 312 (513)
Q Consensus 273 ~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~~~~~~~~------~~~v~~~~~ 312 (513)
+|++|++++.++ .|++||+.+++....+..+ ...+..++|
T Consensus 183 Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 262 (723)
T 1xfd_A 183 DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKW 262 (723)
T ss_dssp TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEE
T ss_pred CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEE
Confidence 999999887553 7999999988765555543 567899999
Q ss_pred eCCCeEE-EEe----CCCcEEEEecCCCeeeEE--ecCCCCe----eEEEeecCCe-EEE--EeCCC------CEEEEe-
Q 010296 313 LRKERVL-TVG----RDRSMQLWKVPEESRLVF--RAPASSL----ECCCFISNDE-FLS--GSDDG------SIELWS- 371 (513)
Q Consensus 313 ~~~~~~~-~~~----~d~~i~iwd~~~~~~~~~--~~~~~~v----~~~~~~~~~~-~~~--~~~dg------~i~iwd- 371 (513)
+|+++++ +.. .+..|++||+.++..... ..+...+ ..++|+|+|. |+. +..++ .|.+||
T Consensus 263 SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~ 342 (723)
T 1xfd_A 263 ATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSS 342 (723)
T ss_dssp SSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECS
T ss_pred eCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEec
Confidence 9999776 333 236799999988776533 2222333 3789999996 443 55666 466666
Q ss_pred cCCCCe--eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCC---CcE
Q 010296 372 LLRKKP--VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGN---GSV 446 (513)
Q Consensus 372 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d---g~v 446 (513)
..++.. ...+.. .+......++|+|+|++|+..+.+ +.+
T Consensus 343 ~~~~~~~~~~~l~~------------------------------------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 386 (723)
T 1xfd_A 343 QPNSSNDNIQSITS------------------------------------GDWDVTKILAYDEKGNKIYFLSTEDLPRRR 386 (723)
T ss_dssp SCCSSSCCCCBSCC------------------------------------SSSCEEEEEEEETTTTEEEEEESSSCTTCC
T ss_pred cCCCCccceeEeec------------------------------------CCeEEEeeeEEcCCCCEEEEEEcCCCCcce
Confidence 333331 222211 011113347999999998766554 789
Q ss_pred EEEEeCCCCc-ceeeeee-cCcccEEEEEEeecCCCEEEEEecCCC
Q 010296 447 RLWAIESETK-DIQPLYN-LPLVGFVNSLAFAKSGQFLIAGVGQEP 490 (513)
Q Consensus 447 ~vwd~~~~~~-~~~~~~~-~~~~~~v~~v~~sp~~~~l~~~~~~dg 490 (513)
+||++..... ....+.. ..+...+..++|+|+|++|+..++...
T Consensus 387 ~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 432 (723)
T 1xfd_A 387 QLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPG 432 (723)
T ss_dssp EEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSS
T ss_pred EEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCC
Confidence 9999975422 2222221 114566889999999999988755443
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=2.3e-23 Score=195.82 Aligned_cols=268 Identities=7% Similarity=0.085 Sum_probs=186.3
Q ss_pred hccCCCeEEEEECCCCCeEEEEeCC-ceEEEEeCC--CCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCC
Q 010296 156 LKHRQSVTAVALSEDDSKGFSASKD-GSILHWDVS--SGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDG 232 (513)
Q Consensus 156 ~~h~~~V~~~~~s~~~~~l~t~~~d-g~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 232 (513)
..|...+.+++|+|++++|++++.+ +.|.+|++. ++...... .... ...+.+++|+|++
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~-----------------~~~~-~~~~~~~~~s~dg 95 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAA-----------------ESAL-PGSLTHISTDHQG 95 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE-----------------EEEC-SSCCSEEEECTTS
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecc-----------------cccc-CCCCcEEEEcCCC
Confidence 3577889999999999999988876 999999997 44422110 0111 2267899999999
Q ss_pred CEEEEEeC-CCcEEEEeC---CCcceeeeccCcCCCeEEEEEecCCCeEEEEe-CCCcEEEEeCCC-CceeE----Eeec
Q 010296 233 RYLASGGL-DRHIHLWDT---RIQEHIQAFPGHRGPVSCLTFRQGTSELFSGS-FDRTVKIWNAED-RAYIS----TLFG 302 (513)
Q Consensus 233 ~~l~s~~~-dg~i~vwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~~~----~~~~ 302 (513)
++|++++. ++.|.+|++ ...+.+..+..+ ..+.+++|+|++++|++++ .++.|.+|++.+ ++... .+..
T Consensus 96 ~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 174 (343)
T 1ri6_A 96 QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT 174 (343)
T ss_dssp SEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC
T ss_pred CEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccccccc
Confidence 98877665 788999999 444555555543 4688999999999888877 899999999987 54432 2222
Q ss_pred -ccCCeEEEEeeCCCe-EEEEe-CCCcEEEEecCC--Ceee---EEe-cC-----CCCeeEEEeecCCe-EE-EEeCCCC
Q 010296 303 -HQSEVLTIDCLRKER-VLTVG-RDRSMQLWKVPE--ESRL---VFR-AP-----ASSLECCCFISNDE-FL-SGSDDGS 366 (513)
Q Consensus 303 -~~~~v~~~~~~~~~~-~~~~~-~d~~i~iwd~~~--~~~~---~~~-~~-----~~~v~~~~~~~~~~-~~-~~~~dg~ 366 (513)
....+..++|+|++. +++++ .++.|.+|++.. +... ... .. ...+..++|+|++. ++ ++..++.
T Consensus 175 ~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~ 254 (343)
T 1ri6_A 175 VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASL 254 (343)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCE
Confidence 344788999999986 54444 789999999953 3221 111 11 23466799999985 44 5557899
Q ss_pred EEEEecC--CC--CeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec-
Q 010296 367 IELWSLL--RK--KPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA- 441 (513)
Q Consensus 367 i~iwd~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~- 441 (513)
|.+|++. ++ +.+..+.... .+..++|+|+|++|++++
T Consensus 255 i~v~d~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~s~dg~~l~~~~~ 296 (343)
T 1ri6_A 255 ITVFSVSEDGSVLSKEGFQPTET--------------------------------------QPRGFNVDHSGKYLIAAGQ 296 (343)
T ss_dssp EEEEEECTTSCCEEEEEEEECSS--------------------------------------SCCCEEECTTSSEEEEECT
T ss_pred EEEEEEcCCCCceEEeeeecCCC--------------------------------------ccceEEECCCCCEEEEecC
Confidence 9999998 32 2333332111 177899999999888877
Q ss_pred CCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCC
Q 010296 442 GNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQ 480 (513)
Q Consensus 442 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~ 480 (513)
.++.|.+|++......+..+..++......+++|.|+.+
T Consensus 297 ~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 297 KSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEG 335 (343)
T ss_dssp TTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC-
T ss_pred CCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEcccC
Confidence 689999997764333344444443334566778877643
No 142
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.92 E-value=1.3e-23 Score=225.96 Aligned_cols=280 Identities=13% Similarity=0.079 Sum_probs=216.6
Q ss_pred chhhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCC-CccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEc
Q 010296 151 EFRVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSS-GKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVS 229 (513)
Q Consensus 151 ~~~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 229 (513)
....+.+|.+.+.++.|+++ .++++++.++++.||.+.. +.....+ ..|. .+..++|+
T Consensus 195 ~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l-------------------~~~~-~~~~~~~S 253 (1045)
T 1k32_A 195 AFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKH-------------------TSFT-DYYPRHLN 253 (1045)
T ss_dssp EEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEEC-------------------CCCC-SSCEEEEE
T ss_pred CeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEe-------------------cCCC-CcceeeEc
Confidence 34556789999999999998 6677888899999998653 2222221 2232 35677999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCcceeeeccC-----------cCCCeEEEEEe-cCCCeEEEEeCCCcEEEEeCCCCcee
Q 010296 230 SDGRYLASGGLDRHIHLWDTRIQEHIQAFPG-----------HRGPVSCLTFR-QGTSELFSGSFDRTVKIWNAEDRAYI 297 (513)
Q Consensus 230 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~ 297 (513)
|+|++|+++. ++.|++|++.... +..+.. |...+.+++|+ |+|++|++++ ++.|++|++.++...
T Consensus 254 pDG~~la~~~-~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~ 330 (1045)
T 1k32_A 254 TDGRRILFSK-GGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL 330 (1045)
T ss_dssp ESSSCEEEEE-TTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE
T ss_pred CCCCEEEEEe-CCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE
Confidence 9999998885 8999999995444 335554 34468999999 9999999887 789999999887654
Q ss_pred EEeecccC-CeEEEEeeCCC-eEEEEeCCCcEE-EEecCCCeeeEEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecC
Q 010296 298 STLFGHQS-EVLTIDCLRKE-RVLTVGRDRSMQ-LWKVPEESRLVFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLL 373 (513)
Q Consensus 298 ~~~~~~~~-~v~~~~~~~~~-~~~~~~~d~~i~-iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~ 373 (513)
. +..|.. .+..+.|+ ++ .+++++.+..+. +|++.++....+..+...+..++|+|+|. +++++.++.|++||+.
T Consensus 331 ~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~ 408 (1045)
T 1k32_A 331 K-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLE 408 (1045)
T ss_dssp E-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred E-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECC
Confidence 3 556776 89999999 87 455777778888 89998877665556778899999999996 7788999999999999
Q ss_pred CCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCC---------
Q 010296 374 RKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNG--------- 444 (513)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg--------- 444 (513)
+++....+.. +...+.+++|||+|++|++++.++
T Consensus 409 tg~~~~~~~~-------------------------------------~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~ 451 (1045)
T 1k32_A 409 TGKPTVIERS-------------------------------------REAMITDFTISDNSRFIAYGFPLKHGETDGYVM 451 (1045)
T ss_dssp TCCEEEEEEC-------------------------------------SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCE
T ss_pred CCceEEeccC-------------------------------------CCCCccceEECCCCCeEEEEecCccccccCCCC
Confidence 9887766532 222378899999999999887654
Q ss_pred -cEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccC
Q 010296 445 -SVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHL 498 (513)
Q Consensus 445 -~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~ 498 (513)
.|++||+.++ . ...+. .+...+.+++|+|||++|+++ +.++...+|+..
T Consensus 452 ~~i~l~d~~~g-~-~~~l~--~~~~~~~~~~~spdG~~l~~~-s~~~~~~~~~~~ 501 (1045)
T 1k32_A 452 QAIHVYDMEGR-K-IFAAT--TENSHDYAPAFDADSKNLYYL-SYRSLDPSPDRV 501 (1045)
T ss_dssp EEEEEEETTTT-E-EEECS--CSSSBEEEEEECTTSCEEEEE-ESCCCCCEECSS
T ss_pred CeEEEEECCCC-c-EEEee--CCCcccCCceEcCCCCEEEEE-ecccCCcCcchh
Confidence 8999999886 2 33333 356678889999999999988 677777888654
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=1.2e-22 Score=189.99 Aligned_cols=260 Identities=7% Similarity=0.038 Sum_probs=184.6
Q ss_pred cCCCcccchhhhhccCCCeEEEEECCCCCeEEEEeC-CceEEEEeCCCCcc-ccccCCChhhhccCCCCCCCCCCCCCcc
Q 010296 144 QKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASK-DGSILHWDVSSGKG-VKYLWPSEEVLKSHGAKDPQGRATKQSK 221 (513)
Q Consensus 144 ~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~~-dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (513)
++....+....+..+...+ +++|+|++++|++++. ++.|.+||+.++.. ...+ ..+..
T Consensus 25 ~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~-------------------~~~~~ 84 (331)
T 3u4y_A 25 FSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI-------------------QEGQS 84 (331)
T ss_dssp EETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE-------------------EECSS
T ss_pred EeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec-------------------ccCCC
Confidence 4444455555555566667 9999999997776665 89999999998876 4332 23344
Q ss_pred cEEEEEEcCCCCEEEEEeCCC---cEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEE-eCCCc-EEEEeCCCCce
Q 010296 222 HILALAVSSDGRYLASGGLDR---HIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSG-SFDRT-VKIWNAEDRAY 296 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~-i~iwd~~~~~~ 296 (513)
++.+++|+|++++|+++..++ .|.+||+.+++.+..+.. .....+++|+|++++|+++ ..++. |.+|++.....
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~ 163 (331)
T 3u4y_A 85 SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGV 163 (331)
T ss_dssp CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCC
T ss_pred CccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCc
Confidence 455599999999999655553 899999999998887764 4457999999999876655 55588 99999876443
Q ss_pred e----EEeecccCCeEEEEeeCCCe-EEEEe-CCCcEEEEecCCCee---eEEecCCCCeeEEEeecCCe-EE-EEeCCC
Q 010296 297 I----STLFGHQSEVLTIDCLRKER-VLTVG-RDRSMQLWKVPEESR---LVFRAPASSLECCCFISNDE-FL-SGSDDG 365 (513)
Q Consensus 297 ~----~~~~~~~~~v~~~~~~~~~~-~~~~~-~d~~i~iwd~~~~~~---~~~~~~~~~v~~~~~~~~~~-~~-~~~~dg 365 (513)
+ .........+..++|+|+++ +++++ .++.|.+||+.++.. +........+..++|+|+|. ++ +...++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 243 (331)
T 3u4y_A 164 LFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTV 243 (331)
T ss_dssp EEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEE
T ss_pred EeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCC
Confidence 3 12223445689999999986 54444 688999999988776 54444556778899999997 43 444578
Q ss_pred CEEEEecCCCCe--eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec-C
Q 010296 366 SIELWSLLRKKP--VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA-G 442 (513)
Q Consensus 366 ~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~-~ 442 (513)
.|.+||+.+++. +..+....... .........++|+|++++|++++ .
T Consensus 244 ~i~~~d~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~spdg~~l~v~~~~ 293 (331)
T 3u4y_A 244 DVFNFNQLSGTLSFVKSFGHGLLID------------------------------PRPLFGANQMALNKTETKLFISANI 293 (331)
T ss_dssp EEEEEETTTTEEEEEEEEECCCCCC------------------------------CGGGTTCCCEEECTTSSEEEEEETT
T ss_pred EEEEEECCCCceeeecccccccccC------------------------------CCCcccccceEECCCCCEEEEecCC
Confidence 899999998876 33332110000 00001136689999999886554 5
Q ss_pred CCcEEEEEeCCC
Q 010296 443 NGSVRLWAIESE 454 (513)
Q Consensus 443 dg~v~vwd~~~~ 454 (513)
++.|.+|++...
T Consensus 294 ~~~v~v~d~~~~ 305 (331)
T 3u4y_A 294 SRELKVFTISGK 305 (331)
T ss_dssp TTEEEEEETTSC
T ss_pred CCcEEEEEecCC
Confidence 679999999775
No 144
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.92 E-value=3.3e-23 Score=195.24 Aligned_cols=275 Identities=12% Similarity=-0.010 Sum_probs=185.4
Q ss_pred EEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEE-EEeCCC
Q 010296 164 AVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLA-SGGLDR 242 (513)
Q Consensus 164 ~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg 242 (513)
.+++++++.++++++.+++|.+||+.+++.+..+. .+....+..++|+|++++++ ++..++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~------------------~~~~~~~~~~~~s~dg~~~~v~~~~~~ 65 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCV------------------MPDKFGPGTAMMAPDNRTAYVLNNHYG 65 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEE------------------CSSCCSSCEEEECTTSSEEEEEETTTT
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEe------------------cCCCCCCceeEECCCCCEEEEEeCCCC
Confidence 45788899999999999999999999988765440 01112467899999998665 555689
Q ss_pred cEEEEeCCCcceeeeccCc------CCCeEEEEEecCCCeEEEEeCC------------CcEEEEeCCCCce---eEEee
Q 010296 243 HIHLWDTRIQEHIQAFPGH------RGPVSCLTFRQGTSELFSGSFD------------RTVKIWNAEDRAY---ISTLF 301 (513)
Q Consensus 243 ~i~vwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~---~~~~~ 301 (513)
.|.+||+.+++.+..+..+ ...+.+++|+|++++|++++.+ +.|.+||+.+++. +..+.
T Consensus 66 ~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 145 (349)
T 1jmx_B 66 DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP 145 (349)
T ss_dssp EEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE
T ss_pred cEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc
Confidence 9999999999887766532 2337889999999999988865 8999999988543 33333
Q ss_pred cccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeeeEEecCCC-------------------------CeeEEEeecCC
Q 010296 302 GHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPAS-------------------------SLECCCFISND 356 (513)
Q Consensus 302 ~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~-------------------------~v~~~~~~~~~ 356 (513)
+...+.+++|+|++.+++++ +.|++||+.++.......... ....+++++++
T Consensus 146 -~~~~~~~~~~s~dg~l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 222 (349)
T 1jmx_B 146 -MPRQVYLMRAADDGSLYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDD 222 (349)
T ss_dssp -CCSSCCCEEECTTSCEEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC---
T ss_pred -CCCcccceeECCCCcEEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCC
Confidence 44468899999999866653 449999998877653322111 12234444332
Q ss_pred eEE--EEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEec-C
Q 010296 357 EFL--SGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCG-G 433 (513)
Q Consensus 357 ~~~--~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~ 433 (513)
... .......+..++..+++....-.. .....+..++|+| +
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~sp~d 266 (349)
T 1jmx_B 223 KQDPATADLLYGYLSVDLKTGKTHTQEFA------------------------------------DLTELYFTGLRSPKD 266 (349)
T ss_dssp ----CCCEEEEEEEEEETTTCCEEEEEEE------------------------------------ECSSCEEEEEECSSC
T ss_pred cCCccccccceeEEEEeccCCcEEecccc------------------------------------cCCCcceeeEecCCC
Confidence 100 000001112234443332111000 0111288999999 9
Q ss_pred CCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 434 SDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 434 ~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
+++|+++ ++.|++||+.++ +.+..+. ....+.+++|+|+|++|+++ +.++.|.+|+..+...
T Consensus 267 g~~l~~~--~~~v~~~d~~~~-~~~~~~~---~~~~~~~~~~s~dg~~l~~~-~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 267 PNQIYGV--LNRLAKYDLKQR-KLIKAAN---LDHTYYCVAFDKKGDKLYLG-GTFNDLAVFNPDTLEK 328 (349)
T ss_dssp TTEEEEE--ESEEEEEETTTT-EEEEEEE---CSSCCCEEEECSSSSCEEEE-SBSSEEEEEETTTTEE
T ss_pred CCEEEEE--cCeEEEEECccC-eEEEEEc---CCCCccceEECCCCCEEEEe-cCCCeEEEEeccccce
Confidence 9999988 889999999887 3323222 33457789999999999987 7789999999876643
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=3.8e-23 Score=213.97 Aligned_cols=295 Identities=7% Similarity=0.001 Sum_probs=194.9
Q ss_pred eEEEEECCCCCeEEEEeCCceEEEEeCCCCccc-cccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeC
Q 010296 162 VTAVALSEDDSKGFSASKDGSILHWDVSSGKGV-KYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGL 240 (513)
Q Consensus 162 V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 240 (513)
+..+.|. +..+++++.++ | +||+.+++.+ ..+........... ........+...|.+++|+|+ +.++.+.
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~--~~~~~~~~~~~~v~~~~~spd-~~~~~~~- 99 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMP--EGCKFQTTDAFPSFRTLDAGR-GLVVLFT- 99 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-------------CCCEEEEETTT-TEEEEEE-
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhcc--chhccccccccCceeEEECCC-CeEEEEE-
Confidence 5557777 66777777788 8 9999998873 32211111100000 000001122356999999999 6666654
Q ss_pred CCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCC-----CceeEEeecccCC---------
Q 010296 241 DRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAED-----RAYISTLFGHQSE--------- 306 (513)
Q Consensus 241 dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~--------- 306 (513)
++.|++||+.+++.... ..+...+.+++|+|+|++|+++ .++.|++|++.+ ++.......+...
T Consensus 100 ~~~i~~~d~~~~~~~~l-~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 100 QGGLVGFDMLARKVTYL-FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQ 177 (706)
T ss_dssp TTEEEEEETTTTEEEEE-ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGG
T ss_pred CCEEEEEECCCCceEEc-cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhh
Confidence 59999999998876544 3466778899999999999985 689999999998 7766544433332
Q ss_pred -----eEEEEeeCCCeEE-EEe---------------------------------CCCcEEEEecCCCeeeEEe---cCC
Q 010296 307 -----VLTIDCLRKERVL-TVG---------------------------------RDRSMQLWKVPEESRLVFR---APA 344 (513)
Q Consensus 307 -----v~~~~~~~~~~~~-~~~---------------------------------~d~~i~iwd~~~~~~~~~~---~~~ 344 (513)
+.++.|+|+++.+ +++ .+..|++||+.++...... .+.
T Consensus 178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 257 (706)
T 2z3z_A 178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKE 257 (706)
T ss_dssp GCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTT
T ss_pred hhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCc
Confidence 4789999998644 555 3478999999988765433 345
Q ss_pred CCeeEEEeecCCe-EEEEeCCC-----CEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCC
Q 010296 345 SSLECCCFISNDE-FLSGSDDG-----SIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHS 418 (513)
Q Consensus 345 ~~v~~~~~~~~~~-~~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 418 (513)
..+..++|+|+|. +++++.++ .|.+||+.+++....+.....
T Consensus 258 ~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~-------------------------------- 305 (706)
T 2z3z_A 258 KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD-------------------------------- 305 (706)
T ss_dssp CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC--------------------------------
T ss_pred eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC--------------------------------
Confidence 6788999999996 66666665 899999999844443321110
Q ss_pred CCCcceEEEEEEec--CCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEE-EEeecCCCEEEEEecCCC----c
Q 010296 419 SSAYSWVSSVTVCG--GSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNS-LAFAKSGQFLIAGVGQEP----R 491 (513)
Q Consensus 419 ~~~~~~i~~~~~s~--~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~-v~~sp~~~~l~~~~~~dg----~ 491 (513)
......+.+++|+| +|++|++++.+|.++||.+......+..+.. +...+.. ++|+|+|+.|+++++.++ .
T Consensus 306 ~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~--~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~ 383 (706)
T 2z3z_A 306 KHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK--GEWEVTNFAGFDPKGTRLYFESTEASPLERH 383 (706)
T ss_dssp SSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCC--SSSCEEEEEEECTTSSEEEEEESSSCTTCBE
T ss_pred CCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCC--CCeEEEeeeEEcCCCCEEEEEecCCCCceEE
Confidence 00001146789999 9999999999999999998733234444432 4556766 899999999888767665 4
Q ss_pred ccccccCCC
Q 010296 492 LGRWGHLPA 500 (513)
Q Consensus 492 v~~W~~~~~ 500 (513)
|..|+...+
T Consensus 384 l~~~d~~~~ 392 (706)
T 2z3z_A 384 FYCIDIKGG 392 (706)
T ss_dssp EEEEETTCC
T ss_pred EEEEEcCCC
Confidence 555555443
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=2.4e-22 Score=216.27 Aligned_cols=309 Identities=9% Similarity=-0.033 Sum_probs=221.8
Q ss_pred cCCCeEEEEEC-CCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcc-cEEEEEEcCCCCEE
Q 010296 158 HRQSVTAVALS-EDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSK-HILALAVSSDGRYL 235 (513)
Q Consensus 158 h~~~V~~~~~s-~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l 235 (513)
|...|.+++|+ |+|++|++++ ++.|.+|++.++.... +..|.. .+..++|+ +|+.|
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~s-dg~~l 351 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK--------------------VPEPLRIRYVRRGGD-TKVAF 351 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE--------------------CSCCSCEEEEEECSS-SEEEE
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE--------------------ccCCCcceEEeeeEc-CCCeE
Confidence 55679999999 9999999888 7899999998766432 234555 79999999 99999
Q ss_pred EEEeCCCcEE-EEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeC
Q 010296 236 ASGGLDRHIH-LWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLR 314 (513)
Q Consensus 236 ~s~~~dg~i~-vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 314 (513)
++++.++.+. +|++.+++.... ..|...+..++|+|+|++|++++.++.|++||+.+++....+..|...+.+++|+|
T Consensus 352 ~~~s~~~~l~~~~d~~~~~~~~l-~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~Sp 430 (1045)
T 1k32_A 352 IHGTREGDFLGIYDYRTGKAEKF-EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISD 430 (1045)
T ss_dssp EEEETTEEEEEEEETTTCCEEEC-CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECT
T ss_pred EEEECCCceEEEEECCCCCceEe-cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECC
Confidence 9999888888 999987765544 37888999999999999999999999999999999988877778999999999999
Q ss_pred CCeEE-EEeCC----------CcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCee----
Q 010296 315 KERVL-TVGRD----------RSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPV---- 378 (513)
Q Consensus 315 ~~~~~-~~~~d----------~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~---- 378 (513)
+++.+ +++.+ +.|++||+.++....+..+...+..++|+|+|. +++++.++...+|+.......
T Consensus 431 DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~ 510 (1045)
T 1k32_A 431 NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVV 510 (1045)
T ss_dssp TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSC
T ss_pred CCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccC
Confidence 99644 55543 489999999888666777777888999999996 778888888888987644321
Q ss_pred ---EEeecCCCcccC--CCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEE-------------e
Q 010296 379 ---YIVKNAHPLLDG--LKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAAS-------------G 440 (513)
Q Consensus 379 ---~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-------------g 440 (513)
..+......... +. ............ ..+. .........+...+..++++|+|.++++ .
T Consensus 511 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d-~~g~-~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~ 587 (1045)
T 1k32_A 511 SKPFVIPLIPGSPNPTKLV-PRSMTSEAGEYD-LNDM-YKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGA 587 (1045)
T ss_dssp BEEEEEESSTTCCCGGGCC-CGGGSCCCCCCC-CTTG-GGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCC
T ss_pred ceeEEEEeCCCCCCccccC-cCcccccccccc-ccCH-hHceEEcCCCCCChhheEEcCCCeEEEEecccCccccccccc
Confidence 111100000000 00 000000000000 0000 0000111234466899999999987875 1
Q ss_pred cCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCc
Q 010296 441 AGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 441 ~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
.....|++||+.++. ...+. ..+.+++|||||++|+++ +.+ .|++|++..+.
T Consensus 588 ~~~~~l~~~d~~~~~--~~~l~-----~~v~~~~~S~DG~~l~~~-~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 588 PEKGVLLKYDVKTRK--VTEVK-----NNLTDLRLSADRKTVMVR-KDD-GKIYTFPLEKP 639 (1045)
T ss_dssp CCCEEEEEEETTTCC--EEEEE-----EEEEEEEECTTSCEEEEE-ETT-SCEEEEESSCT
T ss_pred CCCceEEEEECCCCc--EEEee-----cCcceEEECCCCCEEEEE-cCC-cEEEEeCccCc
Confidence 234578888887762 22222 568899999999999988 444 89999997765
No 147
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=1e-21 Score=189.67 Aligned_cols=212 Identities=14% Similarity=0.128 Sum_probs=156.1
Q ss_pred CCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEE--
Q 010296 159 RQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLA-- 236 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-- 236 (513)
...++.+++++++.+|++++.++ ++||+................+... .......+...|++++|+|++++|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~l~~spdg~~lav~ 110 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDK----VQGLLVPMKFPIHHLALSCDNLTLSAC 110 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEEC----CCCEEECCSSCEEEEEECTTSCEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCccccccc----CccccccCCCcccEEEEcCCCCEEEEE
Confidence 45689999999999999999988 8888754211100000000000000 0001123567799999999999999
Q ss_pred --EEeCCCcEEEEeCCCc--------c---eeeeccCcCCCeEEEEEecC-CCeEEEEeCCCcEEEEeCCCCceeEEeec
Q 010296 237 --SGGLDRHIHLWDTRIQ--------E---HIQAFPGHRGPVSCLTFRQG-TSELFSGSFDRTVKIWNAEDRAYISTLFG 302 (513)
Q Consensus 237 --s~~~dg~i~vwd~~~~--------~---~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 302 (513)
+|+.|+.|+|||+.++ + .+..+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+....+
T Consensus 111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~ 190 (434)
T 2oit_A 111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLP 190 (434)
T ss_dssp EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEEC
T ss_pred EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccC
Confidence 7888999999998765 1 24566779999999999998 78999999999999999999877767777
Q ss_pred ccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeeeEEecCC-------CCeeEEEeecCCeEEE--EeCCCC------
Q 010296 303 HQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRLVFRAPA-------SSLECCCFISNDEFLS--GSDDGS------ 366 (513)
Q Consensus 303 ~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~--~~~dg~------ 366 (513)
|...|.+++|+|++ .+++++.|+.|++||++......+..+. ..+.+++|++++.+++ ...+|.
T Consensus 191 ~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~ 270 (434)
T 2oit_A 191 STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPD 270 (434)
T ss_dssp GGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCE
T ss_pred CCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCc
Confidence 89999999999987 5668999999999999833333333322 2788999999987553 334433
Q ss_pred EEEEecCCC
Q 010296 367 IELWSLLRK 375 (513)
Q Consensus 367 i~iwd~~~~ 375 (513)
+++|++...
T Consensus 271 v~i~~l~~~ 279 (434)
T 2oit_A 271 VVMALLPKK 279 (434)
T ss_dssp EEEEECCCT
T ss_pred eEEEEeccC
Confidence 889999865
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=5.1e-22 Score=187.00 Aligned_cols=247 Identities=12% Similarity=0.131 Sum_probs=170.8
Q ss_pred CcccEEEEEEcCCCCEEEEEeC---CCcEEEEeCCCcc--eeeeccCcCCCeEEEEEecCCCeEEEEe-CCCcEEEEeCC
Q 010296 219 QSKHILALAVSSDGRYLASGGL---DRHIHLWDTRIQE--HIQAFPGHRGPVSCLTFRQGTSELFSGS-FDRTVKIWNAE 292 (513)
Q Consensus 219 ~~~~v~~~~~s~~~~~l~s~~~---dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~ 292 (513)
+...+..++|+|+|+ |++++. ++.|.+|++.++. .+..+..+...+..++|+|++++|++++ .++.|.+|++.
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIA 116 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeC
Confidence 345577899999999 555543 6899999997665 4444455777889999999999988887 68999999996
Q ss_pred C-Cc--eeEEeec---------ccCCeEEEEeeCCCeEEEEe-CCCcEEEEecC-CCeeeE----EecCCCCeeEEEeec
Q 010296 293 D-RA--YISTLFG---------HQSEVLTIDCLRKERVLTVG-RDRSMQLWKVP-EESRLV----FRAPASSLECCCFIS 354 (513)
Q Consensus 293 ~-~~--~~~~~~~---------~~~~v~~~~~~~~~~~~~~~-~d~~i~iwd~~-~~~~~~----~~~~~~~v~~~~~~~ 354 (513)
. +. .+..+.. ....+.+++|+|+++++++. .++.|.+|++. .+.... .......+..++|+|
T Consensus 117 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~sp 196 (347)
T 3hfq_A 117 ADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSP 196 (347)
T ss_dssp TTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECT
T ss_pred CCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECC
Confidence 3 22 2333321 11247889999998866554 57889999998 443321 122334678899999
Q ss_pred CCe-EE-EEeCCCCEEEEecCC--CCee--EEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEE
Q 010296 355 NDE-FL-SGSDDGSIELWSLLR--KKPV--YIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSV 428 (513)
Q Consensus 355 ~~~-~~-~~~~dg~i~iwd~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~ 428 (513)
+|. ++ ++..++.|.+|++.. ++.. ..+...... ......+..+
T Consensus 197 dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~-------------------------------~~~~~~~~~i 245 (347)
T 3hfq_A 197 DGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD-------------------------------YTAHNGAAAI 245 (347)
T ss_dssp TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT-------------------------------CCSCCEEEEE
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC-------------------------------CCCCCcceeE
Confidence 996 44 456788999999874 4322 122111000 0111348899
Q ss_pred EEecCCCEEE-EecCCCcEEEEEeCCCCcceeeeeecC-cccEEEEEEeecCCCEEEEEecCCCcccccccC
Q 010296 429 TVCGGSDLAA-SGAGNGSVRLWAIESETKDIQPLYNLP-LVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHL 498 (513)
Q Consensus 429 ~~s~~~~~l~-~g~~dg~v~vwd~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~ 498 (513)
+|+|+|++|+ +...++.|.+|++.... .+..+..++ +...+.+++|+|+|++|+++...++.|.+|++.
T Consensus 246 ~~spdG~~l~v~~~~~~~v~v~~~~~~g-~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 246 RLSHDGHFLYVSNRGYNTLAVFAVTADG-HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EECTTSCEEEEEEETTTEEEEEEECGGG-CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEECCCC-cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 9999999774 55568999999997431 223333322 345578999999999999986777999999554
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=7.9e-23 Score=206.48 Aligned_cols=276 Identities=10% Similarity=0.068 Sum_probs=193.2
Q ss_pred cCCCeEEEEECCCCCeEEEEeC-CceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCc-ccEEEEEEcCCCCEE
Q 010296 158 HRQSVTAVALSEDDSKGFSASK-DGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQS-KHILALAVSSDGRYL 235 (513)
Q Consensus 158 h~~~V~~~~~s~~~~~l~t~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l 235 (513)
+..+|++++|+|||++||+++. ||+++||++.++.... +..|. ..+.+++|+|+ +++
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~--------------------lt~~~~~~~~~~~~spd-~~l 78 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK--------------------LNREPINSVLDPHYGVG-RVI 78 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE--------------------CCSSCCSEECEECTTCS-EEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe--------------------eecccccccccccCCCC-eEE
Confidence 3668999999999999998876 9999999986655433 12344 57999999999 777
Q ss_pred EEEeC---CCcEEEEeCCC---cceeeeccCcCCCeEEEEEecCCCe-EEEEeCCCcEEEEeCCCCceeEEeecccCCeE
Q 010296 236 ASGGL---DRHIHLWDTRI---QEHIQAFPGHRGPVSCLTFRQGTSE-LFSGSFDRTVKIWNAEDRAYISTLFGHQSEVL 308 (513)
Q Consensus 236 ~s~~~---dg~i~vwd~~~---~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 308 (513)
++++. +....+|.+.. +... .+..+ ..+...+|+|+++. +++.+.++.+.+||+.+++...... +.. .
T Consensus 79 ~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-~~~--~ 153 (582)
T 3o4h_A 79 LVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR-LPG--F 153 (582)
T ss_dssp EEEECSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-ESS--C
T ss_pred EEeccCCCCcceEEEEEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec-CCC--c
Confidence 77765 45456654432 2222 33322 23456788998864 3444455566699999887655443 333 8
Q ss_pred EEEeeCCCeEE-EEeCC----CcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEEEeCCC--CEEEEecCCCCeeEE
Q 010296 309 TIDCLRKERVL-TVGRD----RSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLSGSDDG--SIELWSLLRKKPVYI 380 (513)
Q Consensus 309 ~~~~~~~~~~~-~~~~d----~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~dg--~i~iwd~~~~~~~~~ 380 (513)
++.|+|+|+++ +++.+ +.|++||+.++....+..+...+..++|+|+|+ |+++..++ .|++||+.+++.. .
T Consensus 154 ~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~ 232 (582)
T 3o4h_A 154 GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-D 232 (582)
T ss_dssp EEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-E
T ss_pred eEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-E
Confidence 89999999665 45555 789999999888877778888899999999997 66677788 8999999988876 3
Q ss_pred eecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceee
Q 010296 381 VKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQP 460 (513)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~ 460 (513)
+......... .........+|+|+|.++++++.+|.++||++ + +...
T Consensus 233 ~~~~~~~~~~-----------------------------~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g-~~~~- 279 (582)
T 3o4h_A 233 LELPSKDFSS-----------------------------YRPTAITWLGYLPDGRLAVVARREGRSAVFID--G-ERVE- 279 (582)
T ss_dssp CCCSCSHHHH-----------------------------HCCSEEEEEEECTTSCEEEEEEETTEEEEEET--T-EEEC-
T ss_pred ccCCCcChhh-----------------------------hhhccccceeEcCCCcEEEEEEcCCcEEEEEE--C-Ceec-
Confidence 3221110000 00011334459999999999999999999999 4 2222
Q ss_pred eeecCcccEEEEEEeecCCCEEEEEecCC--CcccccccC
Q 010296 461 LYNLPLVGFVNSLAFAKSGQFLIAGVGQE--PRLGRWGHL 498 (513)
Q Consensus 461 ~~~~~~~~~v~~v~~sp~~~~l~~~~~~d--g~v~~W~~~ 498 (513)
...+.|.+++|+ ++++++++++.. +.|.+|+..
T Consensus 280 ----~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 280 ----APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp ----CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred ----cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 134679999999 999988874444 345566543
No 150
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=2.9e-22 Score=191.78 Aligned_cols=300 Identities=10% Similarity=-0.019 Sum_probs=205.9
Q ss_pred ccCCCcccchhhhhccCCCeEE-----EEECCCCCeEEEEeC-Cc--eEEEEeCCCCccccccCCChhhhccCCCCCCCC
Q 010296 143 VQKPEATDEFRVLLKHRQSVTA-----VALSEDDSKGFSASK-DG--SILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQG 214 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~~V~~-----~~~s~~~~~l~t~~~-dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (513)
+.++.....+..+..|...... .+|+|||++|+.++. ++ .|.+||+.+++.....
T Consensus 14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt----------------- 76 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT----------------- 76 (388)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECC-----------------
T ss_pred EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEee-----------------
Confidence 3455556667777778766666 899999999998887 67 4888899887765422
Q ss_pred CCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEE--EecCCCeEEEE------------
Q 010296 215 RATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLT--FRQGTSELFSG------------ 280 (513)
Q Consensus 215 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~------------ 280 (513)
..+...+..++|+|+|+.|+.++.++.|++||+.+++....+..+...+.... ++|++.+++..
T Consensus 77 --~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~ 154 (388)
T 3pe7_A 77 --EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTD 154 (388)
T ss_dssp --CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS
T ss_pred --eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccc
Confidence 23444445678999999999999999999999999987766665655554444 48999888742
Q ss_pred ----------eCCCcEEEEeCCCCceeEEeecccCCeEEEEeeC-CCeEE-EEeC------CCcEEEEecCCCeeeEEec
Q 010296 281 ----------SFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLR-KERVL-TVGR------DRSMQLWKVPEESRLVFRA 342 (513)
Q Consensus 281 ----------~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~-~~~~------d~~i~iwd~~~~~~~~~~~ 342 (513)
..+..|++||+.+++.. .+..+...+..+.|+| ++..+ .+.. ...|.++++.+.....+..
T Consensus 155 ~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~ 233 (388)
T 3pe7_A 155 WKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT 233 (388)
T ss_dssp HHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC
T ss_pred cchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee
Confidence 24478999999988654 4445677789999999 88644 4443 3378888887665554444
Q ss_pred CC--CCeeEEEeecCCe-EEEEe-CCC----CEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCC
Q 010296 343 PA--SSLECCCFISNDE-FLSGS-DDG----SIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPG 414 (513)
Q Consensus 343 ~~--~~v~~~~~~~~~~-~~~~~-~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 414 (513)
+. ..+....|+|+|. |+..+ .++ .|++||+.+++...........
T Consensus 234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~--------------------------- 286 (388)
T 3pe7_A 234 HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACS--------------------------- 286 (388)
T ss_dssp CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEE---------------------------
T ss_pred CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCce---------------------------
Confidence 43 2467789999996 54332 222 3999999998754332211000
Q ss_pred CcCCCCCc-ceEEEEEEecCCCEEEEe---------cCCCcEEEEEeCCCCcceeeeeecCccc-----------EEEEE
Q 010296 415 SYHSSSAY-SWVSSVTVCGGSDLAASG---------AGNGSVRLWAIESETKDIQPLYNLPLVG-----------FVNSL 473 (513)
Q Consensus 415 ~~~~~~~~-~~i~~~~~s~~~~~l~~g---------~~dg~v~vwd~~~~~~~~~~~~~~~~~~-----------~v~~v 473 (513)
+. .....++|+|+|+.|+.. ..+..|++||+.++ .+..+.. +.. .+.++
T Consensus 287 ------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~l~~--~~~~~~~~~~~~~~~~~~~ 356 (388)
T 3pe7_A 287 ------HLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG--TQHRVAR--HDTSWKVFEGDRQVTHPHP 356 (388)
T ss_dssp ------EEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT--EEEEEEE--CCCCCCCBTTBSSTTCCCC
T ss_pred ------eeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC--ceEEecc--ccCcccccccccccCCCCc
Confidence 00 001123699999988754 45668999999886 2233333 222 47788
Q ss_pred EeecCCCEEEEEecCCCcccccccCC
Q 010296 474 AFAKSGQFLIAGVGQEPRLGRWGHLP 499 (513)
Q Consensus 474 ~~sp~~~~l~~~~~~dg~v~~W~~~~ 499 (513)
+|+|||++|+.++..+|...||.+.-
T Consensus 357 ~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 357 SFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred cCCCCCCEEEEEecCCCceeEEEEEC
Confidence 99999999998877888888886543
No 151
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=3.2e-21 Score=181.95 Aligned_cols=243 Identities=10% Similarity=-0.013 Sum_probs=188.1
Q ss_pred cccEEEEEEcCCCCEEEEEeC-------CCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEE-EeCCCcEEEEeC
Q 010296 220 SKHILALAVSSDGRYLASGGL-------DRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFS-GSFDRTVKIWNA 291 (513)
Q Consensus 220 ~~~v~~~~~s~~~~~l~s~~~-------dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~ 291 (513)
...+..++|+|++++|++++. ++.|.+||+.+++.+..+.. ...+..++|+|+++++++ ...++.|.+||+
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 445889999999998888774 46899999999998888764 445788999999996664 455799999999
Q ss_pred CCCceeEEeecccCC---------eEEEEeeCCCe-EEEEe--CCCcEEEEecCCCeeeEEec-CCCCeeEEEeecCCe-
Q 010296 292 EDRAYISTLFGHQSE---------VLTIDCLRKER-VLTVG--RDRSMQLWKVPEESRLVFRA-PASSLECCCFISNDE- 357 (513)
Q Consensus 292 ~~~~~~~~~~~~~~~---------v~~~~~~~~~~-~~~~~--~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~- 357 (513)
.+++.+..+..+... +.++.|+|++. +++++ .++.|.+||+.+........ +...+..++|+|++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR 198 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCE
Confidence 999988777654322 68899999875 44444 47889999999888775544 556688899999985
Q ss_pred EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEE
Q 010296 358 FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLA 437 (513)
Q Consensus 358 ~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 437 (513)
+++++.++.|.+||+.+++.+..+.... ..+...+..++|+|++++|
T Consensus 199 l~~~~~~~~i~~~d~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~s~dg~~l 245 (353)
T 3vgz_A 199 LYTTNADGELITIDTADNKILSRKKLLD---------------------------------DGKEHFFINISLDTARQRA 245 (353)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCC---------------------------------SSSCCCEEEEEEETTTTEE
T ss_pred EEEEcCCCeEEEEECCCCeEEEEEEcCC---------------------------------CCCCcccceEEECCCCCEE
Confidence 7788889999999999998887775421 1122338899999999977
Q ss_pred EEecC-CCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCc
Q 010296 438 ASGAG-NGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 438 ~~g~~-dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
++++. ++.|.+||+.++ ..+..+.. .. ..+++|+|+|++|+++...++.|.+|+...+.
T Consensus 246 ~~~~~~~~~v~~~d~~~~-~~~~~~~~---~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 246 FITDSKAAEVLVVDTRNG-NILAKVAA---PE-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp EEEESSSSEEEEEETTTC-CEEEEEEC---SS-CCCEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred EEEeCCCCEEEEEECCCC-cEEEEEEc---CC-CceEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 76654 589999999887 33333322 12 25699999999888886789999999987654
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=7.7e-22 Score=184.83 Aligned_cols=237 Identities=14% Similarity=0.147 Sum_probs=177.7
Q ss_pred CeEEEEECCCCCeEE-EEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEe
Q 010296 161 SVTAVALSEDDSKGF-SASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGG 239 (513)
Q Consensus 161 ~V~~~~~s~~~~~l~-t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 239 (513)
.+.+++|+|++++++ +++.++.|.+||+.+++.+..+.... ...|...+.+++|+|+|++|++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~s~dg~~l~~~~ 100 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLST--------------PEERVKSLFGAALSPDGKTLAIYE 100 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCB--------------TTEEEECTTCEEECTTSSEEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCC--------------cccccccccceEECCCCCEEEEEe
Confidence 588999999998765 55667899999999888765441000 000223567899999999998886
Q ss_pred ------------CCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCe
Q 010296 240 ------------LDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEV 307 (513)
Q Consensus 240 ------------~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v 307 (513)
.++.|.+||+.+++.+..+.. ...+.+++|+|++++|+++ ++.|.+||+.+++.+..+..+.. .
T Consensus 101 ~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~ 176 (337)
T 1pby_B 101 SPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW-E 176 (337)
T ss_dssp EEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT-T
T ss_pred cccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc-C
Confidence 579999999999888877764 4567889999999988888 68999999999988776654331 1
Q ss_pred EEEEeeCCCeEE-EEeC-CC-----------------------cEEEEecCCCeee--EEecCCCCeeEEEeecCCeEEE
Q 010296 308 LTIDCLRKERVL-TVGR-DR-----------------------SMQLWKVPEESRL--VFRAPASSLECCCFISNDEFLS 360 (513)
Q Consensus 308 ~~~~~~~~~~~~-~~~~-d~-----------------------~i~iwd~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~ 360 (513)
..+.|+|++..+ +.+. ++ .|.+||+.+++.. ....+...+.+++|+|++.++.
T Consensus 177 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 256 (337)
T 1pby_B 177 AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAF 256 (337)
T ss_dssp TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEE
Confidence 123677876533 2222 22 4789999887654 2334556778899999997443
Q ss_pred EeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEe
Q 010296 361 GSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASG 440 (513)
Q Consensus 361 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g 440 (513)
.+ ++.|.+||+.+++.+..+..... +.+++|+|+|++|+++
T Consensus 257 ~~-~~~v~~~d~~~~~~~~~~~~~~~--------------------------------------~~~~~~s~dg~~l~~~ 297 (337)
T 1pby_B 257 GA-YNVLESFDLEKNASIKRVPLPHS--------------------------------------YYSVNVSTDGSTVWLG 297 (337)
T ss_dssp EE-ESEEEEEETTTTEEEEEEECSSC--------------------------------------CCEEEECTTSCEEEEE
T ss_pred Ee-CCeEEEEECCCCcCcceecCCCc--------------------------------------eeeEEECCCCCEEEEE
Confidence 33 79999999999988777653221 7789999999999999
Q ss_pred cCCCcEEEEEeCCC
Q 010296 441 AGNGSVRLWAIESE 454 (513)
Q Consensus 441 ~~dg~v~vwd~~~~ 454 (513)
+.++.|++||+.++
T Consensus 298 ~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 298 GALGDLAAYDAETL 311 (337)
T ss_dssp SBSSEEEEEETTTC
T ss_pred cCCCcEEEEECcCC
Confidence 99999999999887
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=4.3e-21 Score=181.68 Aligned_cols=276 Identities=8% Similarity=0.078 Sum_probs=184.2
Q ss_pred CCCeEEEEe----CCceEEEEeCC--CCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCC--
Q 010296 170 DDSKGFSAS----KDGSILHWDVS--SGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLD-- 241 (513)
Q Consensus 170 ~~~~l~t~~----~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-- 241 (513)
...++++|+ .++.|.+|.+. +++..... .. +...+..++|+|++++|++++.+
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~------------------~~-~~~~p~~l~~spdg~~l~~~~~~~~ 72 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLS------------------DA-EVANPSYLIPSADGKFVYSVNEFSK 72 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEE------------------EE-ECSCCCSEEECTTSSEEEEEECCSS
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEee------------------cc-cCCCCceEEECCCCCEEEEEEccCC
Confidence 334566664 45688998764 44432211 11 45567789999999999999875
Q ss_pred --CcEEEEeCCC--cc--eeeeccCcCCCeEEEEEecCCCeEEEEe-CCCcEEEEeCCCCceeEEe------ec------
Q 010296 242 --RHIHLWDTRI--QE--HIQAFPGHRGPVSCLTFRQGTSELFSGS-FDRTVKIWNAEDRAYISTL------FG------ 302 (513)
Q Consensus 242 --g~i~vwd~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~------~~------ 302 (513)
+.|.+|++.. +. .+..+..+......+++ ++++|++++ .++.|.+|++.....+..+ .+
T Consensus 73 ~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 150 (361)
T 3scy_A 73 DQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKE 150 (361)
T ss_dssp TTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTT
T ss_pred CCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCcc
Confidence 7999998765 43 33344445566777887 788777666 5889999999754332211 11
Q ss_pred --ccCCeEEEEeeCCCe-EEEEe-CCCcEEEEecCCCee--------------eEEecCCCCeeEEEeecCCe-EEEEe-
Q 010296 303 --HQSEVLTIDCLRKER-VLTVG-RDRSMQLWKVPEESR--------------LVFRAPASSLECCCFISNDE-FLSGS- 362 (513)
Q Consensus 303 --~~~~v~~~~~~~~~~-~~~~~-~d~~i~iwd~~~~~~--------------~~~~~~~~~v~~~~~~~~~~-~~~~~- 362 (513)
+...+.+++|+|+++ +++++ .++.|.+|++..... .........+..++|+|+|+ +++++
T Consensus 151 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 230 (361)
T 3scy_A 151 RQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINE 230 (361)
T ss_dssp TCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred ccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcC
Confidence 122357899999996 55554 478999998875431 22334456678999999996 44554
Q ss_pred CCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecC
Q 010296 363 DDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAG 442 (513)
Q Consensus 363 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~ 442 (513)
.++.|.+|++.+++.......... ..+......++|+|+|++|+++..
T Consensus 231 ~~~~v~v~~~~~g~~~~~~~~~~~--------------------------------~~~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 231 IGGTVIAFRYADGMLDEIQTVAAD--------------------------------TVNAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp TTCEEEEEEEETTEEEEEEEEESC--------------------------------SSCCCCEEEEEECTTSSEEEEEEC
T ss_pred CCCeEEEEEecCCceEEeEEEecC--------------------------------CCCCCCcccEEECCCCCEEEEECC
Confidence 689999999987654222111000 111123689999999998877665
Q ss_pred --CCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccC
Q 010296 443 --NGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHL 498 (513)
Q Consensus 443 --dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~ 498 (513)
++.|.+|++......+..+........+.+++|+|+|++|+++...++.|.+|.+.
T Consensus 279 ~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 279 LKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp SSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 48999999973222333333332345678999999999999996688999997554
No 154
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=4.4e-22 Score=182.66 Aligned_cols=235 Identities=15% Similarity=0.025 Sum_probs=171.7
Q ss_pred hhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCC-CccccccCCChhhhccCCCCCCCCCCCCC-cccEEEEEEcC
Q 010296 153 RVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSS-GKGVKYLWPSEEVLKSHGAKDPQGRATKQ-SKHILALAVSS 230 (513)
Q Consensus 153 ~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~ 230 (513)
..+..|...|.+++|+|++++|++++ ++.|++||+.+ +...... ..+ ...|.+++|+|
T Consensus 35 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~-------------------~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVD-------------------TGFATICNNDHGISP 94 (297)
T ss_dssp EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECC-------------------CTTCCCBCSCCEECT
T ss_pred eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEec-------------------cccccccccceEECC
Confidence 35667899999999999999999987 78999999998 6654322 222 46688999999
Q ss_pred CCCEEEEEeC--CC--cEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEE-EEeCCCcEEEEeCCC-CceeEEeeccc
Q 010296 231 DGRYLASGGL--DR--HIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELF-SGSFDRTVKIWNAED-RAYISTLFGHQ 304 (513)
Q Consensus 231 ~~~~l~s~~~--dg--~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~-~~~~~~~~~~~ 304 (513)
++++|++++. ++ .|.+|++.++. ...+..+ ..+..++|+|++++|+ +++.++.+.||++.. ......+..+.
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 172 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGE 172 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSS
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCC
Confidence 9999999983 33 45555555554 3444433 3489999999999887 778899999998632 23345566678
Q ss_pred CCeEEEEeeCCCe-EEEEe-CCCcEEEEecC--CCeeeEEecCCCCeeEEEeecCCe-EEEEeCC-----------CCEE
Q 010296 305 SEVLTIDCLRKER-VLTVG-RDRSMQLWKVP--EESRLVFRAPASSLECCCFISNDE-FLSGSDD-----------GSIE 368 (513)
Q Consensus 305 ~~v~~~~~~~~~~-~~~~~-~d~~i~iwd~~--~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d-----------g~i~ 368 (513)
..+.++.|+|++. +++++ .++.+.+|++. ......+..+...+..++|+|++. |++++.+ +.|.
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~ 252 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQ 252 (297)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEE
T ss_pred CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEE
Confidence 8899999999986 44444 58899999875 334445556667788999999996 5555554 5699
Q ss_pred EEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCC
Q 010296 369 LWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNG 444 (513)
Q Consensus 369 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg 444 (513)
+||+.+++....... ..+...+.+++|+|++++|++++.+.
T Consensus 253 ~~d~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 253 LMDMDGGNVETLFDL-----------------------------------FGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEETTSCSCEEEEEE-----------------------------------EESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEecCCCCceeeecc-----------------------------------CCCCcccccceECCCCCEEEEEEecc
Confidence 999988866443321 11122377899999999998887653
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=4.2e-22 Score=206.50 Aligned_cols=299 Identities=13% Similarity=0.062 Sum_probs=199.9
Q ss_pred ccCCCcccchhhhhccCC---CeEEEEECCCCCeEEEEeC---------CceEEEEeCCCCccccccCCChhhhccCCCC
Q 010296 143 VQKPEATDEFRVLLKHRQ---SVTAVALSEDDSKGFSASK---------DGSILHWDVSSGKGVKYLWPSEEVLKSHGAK 210 (513)
Q Consensus 143 ~~~~~~~~~~~~~~~h~~---~V~~~~~s~~~~~l~t~~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 210 (513)
+|+.........+.+|.. .|.+++|||||++|++++. ++.|++||+.+++.+...
T Consensus 40 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~------------- 106 (719)
T 1z68_A 40 LYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN------------- 106 (719)
T ss_dssp EEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS-------------
T ss_pred EEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccce-------------
Confidence 344444444444545543 4999999999999998876 789999999988753110
Q ss_pred CCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeec-cCcCCCe-----------------EEEEEec
Q 010296 211 DPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAF-PGHRGPV-----------------SCLTFRQ 272 (513)
Q Consensus 211 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~v-----------------~~~~~~~ 272 (513)
.....+..++|||||++|+++. ++.|++|++.+++..... .++...| .+++|+|
T Consensus 107 -------~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP 178 (719)
T 1z68_A 107 -------ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP 178 (719)
T ss_dssp -------CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT
T ss_pred -------ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC
Confidence 0123478899999999999986 789999999888765433 2333222 4899999
Q ss_pred CCCeEEEEeCCC----------------------------------cEEEEeCCCCcee---E-----EeecccCCeEEE
Q 010296 273 GTSELFSGSFDR----------------------------------TVKIWNAEDRAYI---S-----TLFGHQSEVLTI 310 (513)
Q Consensus 273 ~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~~---~-----~~~~~~~~v~~~ 310 (513)
||++|++++.|. .|++||+.+++.. . .+.+|...+..+
T Consensus 179 DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (719)
T 1z68_A 179 NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWL 258 (719)
T ss_dssp TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEE
T ss_pred CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEe
Confidence 999999887652 7889999987653 1 123577789999
Q ss_pred EeeCCCeEEEEeC-C----CcEEEEe----cCCCeeeEE-----ecCCCCee-----EEEeecCCe-EE--EEeCCC--C
Q 010296 311 DCLRKERVLTVGR-D----RSMQLWK----VPEESRLVF-----RAPASSLE-----CCCFISNDE-FL--SGSDDG--S 366 (513)
Q Consensus 311 ~~~~~~~~~~~~~-d----~~i~iwd----~~~~~~~~~-----~~~~~~v~-----~~~~~~~~~-~~--~~~~dg--~ 366 (513)
+|+|+++++.... . ..|.+|| +.++..... ..+...+. .+.|+|+|. ++ +...+| .
T Consensus 259 ~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~ 338 (719)
T 1z68_A 259 TWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKH 338 (719)
T ss_dssp EESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEE
T ss_pred EEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceE
Confidence 9999998775432 1 2488899 766654422 34555555 789999986 33 344555 4
Q ss_pred EEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCC---
Q 010296 367 IELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGN--- 443 (513)
Q Consensus 367 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d--- 443 (513)
|.+|++.+++. ..+.. +...+..+.++ +++.|+..+.+
T Consensus 339 l~~~~~~~~~~-~~lt~-------------------------------------~~~~v~~~~~~-d~~~i~~~~~~~~~ 379 (719)
T 1z68_A 339 IHYIKDTVENA-IQITS-------------------------------------GKWEAINIFRV-TQDSLFYSSNEFEE 379 (719)
T ss_dssp EEEESSCSTTC-EECSC-------------------------------------SSSCEEEEEEE-CSSEEEEEESCGGG
T ss_pred EEEEECCCCce-Eeccc-------------------------------------CceEEEEEEEE-eCCEEEEEEecCCC
Confidence 66667666552 22221 11126677777 77776666554
Q ss_pred --CcEEEEEeCCCCc--ceeeeee-cC-cccEEEEEEeecCCCEEEEEecCC--CcccccccCCCc
Q 010296 444 --GSVRLWAIESETK--DIQPLYN-LP-LVGFVNSLAFAKSGQFLIAGVGQE--PRLGRWGHLPAA 501 (513)
Q Consensus 444 --g~v~vwd~~~~~~--~~~~~~~-~~-~~~~v~~v~~sp~~~~l~~~~~~d--g~v~~W~~~~~~ 501 (513)
+.++||.+..... ....+.. +. +...+..+.|+|++++|+..++.. ..+.+|+...+.
T Consensus 380 ~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 380 YPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp CTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred CCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence 8899999875211 1222221 11 445678899999999887654443 567888876554
No 156
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1.3e-20 Score=181.90 Aligned_cols=165 Identities=13% Similarity=0.053 Sum_probs=131.6
Q ss_pred ccCCCeEEEEECCCCCeEE----EEeCCceEEEEeCCCCc-----cccccCCChhhhccCCCCCCCCCCCCCcccEEEEE
Q 010296 157 KHRQSVTAVALSEDDSKGF----SASKDGSILHWDVSSGK-----GVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALA 227 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~----t~~~dg~v~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 227 (513)
.|.+.|++++|+|++++|+ +|+.|++|+|||+.++. ....+ .......+|...|.+++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~-------------~~~~~~~~h~~~V~~v~ 156 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPF-------------AYHKLLKDAGGMVIDMK 156 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCS-------------EEEECCCSGGGSEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCccee-------------eeeeccCCCCCceEEEE
Confidence 4677899999999999999 78889999999987541 10000 00113457899999999
Q ss_pred EcCC-CCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecc---
Q 010296 228 VSSD-GRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGH--- 303 (513)
Q Consensus 228 ~s~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--- 303 (513)
|+|+ +.+|++++.||+|++||++++..+....+|...|.+++|+|++++|++|+.||.|++||++ +.....+..+
T Consensus 157 ~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~ 235 (434)
T 2oit_A 157 WNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFY 235 (434)
T ss_dssp ECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTC
T ss_pred ECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCccc
Confidence 9997 8899999999999999999987776777799999999999999999999999999999998 5555554433
Q ss_pred ----cCCeEEEEeeCCCeEEEEe--CCC------cEEEEecCCC
Q 010296 304 ----QSEVLTIDCLRKERVLTVG--RDR------SMQLWKVPEE 335 (513)
Q Consensus 304 ----~~~v~~~~~~~~~~~~~~~--~d~------~i~iwd~~~~ 335 (513)
...|.++.|++++.++++. .+| .+++|++...
T Consensus 236 ~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 236 ESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 2378999999988777433 332 3899999764
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=3.3e-20 Score=174.56 Aligned_cols=244 Identities=9% Similarity=0.070 Sum_probs=167.8
Q ss_pred hccCCCeEEEEECCCCCeEEEEeC---CceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCC
Q 010296 156 LKHRQSVTAVALSEDDSKGFSASK---DGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDG 232 (513)
Q Consensus 156 ~~h~~~V~~~~~s~~~~~l~t~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 232 (513)
..+...+..++|+|+|+ |++++. ++.|.+|++.++...... ....+...+..++|+|+|
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~-----------------~~~~~~~~p~~~a~spdg 97 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLN-----------------TVVAPGTPPAYVAVDEAR 97 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEE-----------------EEEEESCCCSEEEEETTT
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEee-----------------eeecCCCCCEEEEECCCC
Confidence 35667788999999999 665544 689999999766532210 112345668899999999
Q ss_pred CEEEEEe-CCCcEEEEeCCC-c--ceeeeccC---------cCCCeEEEEEecCCCeEEEEeCCCcEEEEeCC-CCceeE
Q 010296 233 RYLASGG-LDRHIHLWDTRI-Q--EHIQAFPG---------HRGPVSCLTFRQGTSELFSGSFDRTVKIWNAE-DRAYIS 298 (513)
Q Consensus 233 ~~l~s~~-~dg~i~vwd~~~-~--~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~ 298 (513)
++|++++ .++.|.+|++.. + ..+..+.. +...+.+++|+|+++++++...++.|.+|++. +++...
T Consensus 98 ~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~ 177 (347)
T 3hfq_A 98 QLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSE 177 (347)
T ss_dssp TEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEE
T ss_pred CEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEE
Confidence 9988887 679999999862 2 22333321 12348899999999955566678899999998 454322
Q ss_pred --Eeec-ccCCeEEEEeeCCCe-EEE-EeCCCcEEEEecCC--Ceee---EEecCC------CCeeEEEeecCCe-E-EE
Q 010296 299 --TLFG-HQSEVLTIDCLRKER-VLT-VGRDRSMQLWKVPE--ESRL---VFRAPA------SSLECCCFISNDE-F-LS 360 (513)
Q Consensus 299 --~~~~-~~~~v~~~~~~~~~~-~~~-~~~d~~i~iwd~~~--~~~~---~~~~~~------~~v~~~~~~~~~~-~-~~ 360 (513)
.+.. ....+..++|+|+++ +++ ...++.|.+|++.. +... ...... ..+..++|+|+|+ + ++
T Consensus 178 ~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~ 257 (347)
T 3hfq_A 178 QSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVS 257 (347)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEE
T ss_pred eeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEE
Confidence 2222 233678899999996 444 44688999999874 3322 122211 3478899999996 4 46
Q ss_pred EeCCCCEEEEecCCC---CeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEE
Q 010296 361 GSDDGSIELWSLLRK---KPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLA 437 (513)
Q Consensus 361 ~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 437 (513)
...++.|.+|++... +.+..+.. +...+..++|+|+|++|
T Consensus 258 ~~~~~~v~v~~~~~~g~~~~~~~~~~-------------------------------------~~~~~~~~~~spdg~~l 300 (347)
T 3hfq_A 258 NRGYNTLAVFAVTADGHLTLIQQIST-------------------------------------EGDFPRDFDLDPTEAFV 300 (347)
T ss_dssp EETTTEEEEEEECGGGCEEEEEEEEC-------------------------------------SSSCCCEEEECTTSSEE
T ss_pred eCCCCEEEEEEECCCCcEEEeEEEec-------------------------------------CCCCcCeEEECCCCCEE
Confidence 667899999998732 22333321 11227789999999988
Q ss_pred EEecC-CCcEEEEEeCCC
Q 010296 438 ASGAG-NGSVRLWAIESE 454 (513)
Q Consensus 438 ~~g~~-dg~v~vwd~~~~ 454 (513)
++++. ++.|.+|++...
T Consensus 301 ~v~~~~~~~v~v~~~d~~ 318 (347)
T 3hfq_A 301 VVVNQNTDNATLYARDLT 318 (347)
T ss_dssp EEEETTTTEEEEEEECTT
T ss_pred EEEEcCCCcEEEEEEeCC
Confidence 88765 489999977543
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=9.5e-20 Score=172.44 Aligned_cols=262 Identities=6% Similarity=0.027 Sum_probs=176.2
Q ss_pred cCCCeEEEEECCCCCeEEEEeCC----ceEEEEeCCCC--ccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC
Q 010296 158 HRQSVTAVALSEDDSKGFSASKD----GSILHWDVSSG--KGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD 231 (513)
Q Consensus 158 h~~~V~~~~~s~~~~~l~t~~~d----g~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 231 (513)
|...+..++|+|++++|++++.+ +.|.+|++... ...... ....+......+++ +
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~-----------------~~~~~~~~p~~~~~--d 108 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN-----------------TQKTMGADPCYLTT--N 108 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE-----------------EEECSSSCEEEEEE--C
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee-----------------EeccCCCCcEEEEE--C
Confidence 77888899999999999999876 79999998753 221110 01123445777787 7
Q ss_pred CCEEEEEe-CCCcEEEEeCCCcceeeecc--------------CcCCCeEEEEEecCCCeEEEEe-CCCcEEEEeCCCCc
Q 010296 232 GRYLASGG-LDRHIHLWDTRIQEHIQAFP--------------GHRGPVSCLTFRQGTSELFSGS-FDRTVKIWNAEDRA 295 (513)
Q Consensus 232 ~~~l~s~~-~dg~i~vwd~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~ 295 (513)
+++|++++ .++.|.+|++.....+..+. .+...+.+++|+|++++|++++ .++.|.+|++....
T Consensus 109 g~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~ 188 (361)
T 3scy_A 109 GKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNA 188 (361)
T ss_dssp SSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTC
T ss_pred CCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCC
Confidence 88777776 57899999997544332211 1233468899999999776655 48899999887543
Q ss_pred e------e-------EEeecccCCeEEEEeeCCCe-EEEEe-CCCcEEEEecCCCeeeE---Ee---cCCCCeeEEEeec
Q 010296 296 Y------I-------STLFGHQSEVLTIDCLRKER-VLTVG-RDRSMQLWKVPEESRLV---FR---APASSLECCCFIS 354 (513)
Q Consensus 296 ~------~-------~~~~~~~~~v~~~~~~~~~~-~~~~~-~d~~i~iwd~~~~~~~~---~~---~~~~~v~~~~~~~ 354 (513)
. + .........+..++|+|+++ +++++ .++.|.+|++.++.... .. .+......++|+|
T Consensus 189 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp 268 (361)
T 3scy_A 189 NADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP 268 (361)
T ss_dssp CTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT
T ss_pred CcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC
Confidence 1 1 11223455678999999996 44555 58999999998765421 11 2234567999999
Q ss_pred CCe-EEEEeC--CCCEEEEecC--CCC--eeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEE
Q 010296 355 NDE-FLSGSD--DGSIELWSLL--RKK--PVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSS 427 (513)
Q Consensus 355 ~~~-~~~~~~--dg~i~iwd~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~ 427 (513)
+|+ ++++.. ++.|.+|++. +++ .+..+.. ...+..
T Consensus 269 dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--------------------------------------g~~~~~ 310 (361)
T 3scy_A 269 DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--------------------------------------GIHPRN 310 (361)
T ss_dssp TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--------------------------------------SSCCCE
T ss_pred CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--------------------------------------CCCCce
Confidence 997 444444 5899999986 444 2323321 112778
Q ss_pred EEEecCCCEEEEec-CCCcEEEEEeCCCCcceeeeeecCcccEEEEEEee
Q 010296 428 VTVCGGSDLAASGA-GNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFA 476 (513)
Q Consensus 428 ~~~s~~~~~l~~g~-~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~s 476 (513)
++|+|+|++|++++ .++.|.+|.+......+..+....+...+.||.|.
T Consensus 311 ~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 311 FIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 99999999888877 67899998776432333333222234568889886
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=3.9e-21 Score=199.26 Aligned_cols=274 Identities=7% Similarity=0.041 Sum_probs=186.5
Q ss_pred EEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcc---cEEEEEEcCCCCEEEEEe
Q 010296 163 TAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSK---HILALAVSSDGRYLASGG 239 (513)
Q Consensus 163 ~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~s~~ 239 (513)
.+++|+|++.++++ +.|++|++||+.+++....+ ..|.. .+.+++|||||++|++++
T Consensus 19 ~~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~-------------------~~~~~~~~~~~~~~~SpDg~~la~~~ 78 (719)
T 1z68_A 19 FFPNWISGQEYLHQ-SADNNIVLYNIETGQSYTIL-------------------SNRTMKSVNASNYGLSPDRQFVYLES 78 (719)
T ss_dssp CCCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEE-------------------CHHHHHTTTCSEEEECTTSSEEEEEE
T ss_pred CccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEE-------------------ccccccccceeeEEECCCCCeEEEEe
Confidence 37899999965554 46999999999998865533 12222 388999999999999887
Q ss_pred C---------CCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEe-ecccCCe--
Q 010296 240 L---------DRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTL-FGHQSEV-- 307 (513)
Q Consensus 240 ~---------dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v-- 307 (513)
. ++.|++||+.+++.+.... ....+..++|+|+|+.|+.+. ++.|++|++.+++..... .++...+
T Consensus 79 ~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~ 156 (719)
T 1z68_A 79 DYSKLWRYSYTATYYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFN 156 (719)
T ss_dssp EEEECSSSCEEEEEEEEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEE
T ss_pred cCceeEEeecceEEEEEECCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEc
Confidence 6 6899999999888732111 125688999999999999885 789999999888765432 2222222
Q ss_pred ---------------EEEEeeCCCeEE-EEeCCC----------------------------------cEEEEecCCCee
Q 010296 308 ---------------LTIDCLRKERVL-TVGRDR----------------------------------SMQLWKVPEESR 337 (513)
Q Consensus 308 ---------------~~~~~~~~~~~~-~~~~d~----------------------------------~i~iwd~~~~~~ 337 (513)
.++.|+|+|+.+ +++.+. .|++||+.++..
T Consensus 157 g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~ 236 (719)
T 1z68_A 157 GIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAY 236 (719)
T ss_dssp SSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHH
T ss_pred ccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCc
Confidence 489999998544 555432 788999987764
Q ss_pred e---EE------ecCCCCeeEEEeecCCeEEEE-eCC----CCEEEEe----cCCCCeeEEee---cCCCcccCCCCccc
Q 010296 338 L---VF------RAPASSLECCCFISNDEFLSG-SDD----GSIELWS----LLRKKPVYIVK---NAHPLLDGLKNFEQ 396 (513)
Q Consensus 338 ~---~~------~~~~~~v~~~~~~~~~~~~~~-~~d----g~i~iwd----~~~~~~~~~~~---~~~~~~~~~~~~~~ 396 (513)
. .+ ..+...+..++|+|+++++.. ... ..|.+|| +.++++...+. ..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~------------ 304 (719)
T 1z68_A 237 VGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEES------------ 304 (719)
T ss_dssp HCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEEC------------
T ss_pred cceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEeccccc------------
Confidence 2 21 245667889999999975533 222 2488888 66665433221 11
Q ss_pred CcCccccccCCCCCCCCCCcCCCCCcceEE-----EEEEecCCCEEEE--ecCCC--cEEEEEeCCCCcceeeeeecCcc
Q 010296 397 DEGKISNGHSENGNLNPGSYHSSSAYSWVS-----SVTVCGGSDLAAS--GAGNG--SVRLWAIESETKDIQPLYNLPLV 467 (513)
Q Consensus 397 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~-----~~~~s~~~~~l~~--g~~dg--~v~vwd~~~~~~~~~~~~~~~~~ 467 (513)
+..++. .++|+|+|+.|+. +..+| .|++|++.++ ....+.. +.
T Consensus 305 ------------------------~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~--~~~~lt~--~~ 356 (719)
T 1z68_A 305 ------------------------RTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE--NAIQITS--GK 356 (719)
T ss_dssp ------------------------SSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST--TCEECSC--SS
T ss_pred ------------------------CCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC--ceEeccc--Cc
Confidence 111233 6789999986554 44555 4666666554 2333332 34
Q ss_pred cEEEEEEeecCCCEEEEEecC----CCcccccccCC
Q 010296 468 GFVNSLAFAKSGQFLIAGVGQ----EPRLGRWGHLP 499 (513)
Q Consensus 468 ~~v~~v~~sp~~~~l~~~~~~----dg~v~~W~~~~ 499 (513)
..+..+.++ +++.|+..+.. ++.+++|.+..
T Consensus 357 ~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 357 WEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp SCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred eEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 557777888 88888877555 58899997654
No 160
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.86 E-value=1.2e-20 Score=181.03 Aligned_cols=290 Identities=9% Similarity=-0.066 Sum_probs=193.9
Q ss_pred CCCcccchhhhhccCC-----CeEEEEECCCCCeEEEEeCC---ceEEEEeCCCCccccccCCChhhhccCCCCCCCCCC
Q 010296 145 KPEATDEFRVLLKHRQ-----SVTAVALSEDDSKGFSASKD---GSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRA 216 (513)
Q Consensus 145 ~~~~~~~~~~~~~h~~-----~V~~~~~s~~~~~l~t~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (513)
++.....++.+..+.. .+.+++|+|+|++|+.+... ..|.+|++.+++.....
T Consensus 16 d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~------------------- 76 (396)
T 3c5m_A 16 DSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLT------------------- 76 (396)
T ss_dssp CTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECC-------------------
T ss_pred cCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEee-------------------
Confidence 3444444455554433 37889999999998876543 47888899887644321
Q ss_pred CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEE-------------------EEEecCCCeE
Q 010296 217 TKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSC-------------------LTFRQGTSEL 277 (513)
Q Consensus 217 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l 277 (513)
..+......+.|+|+|++|+.++.++.|++|++.+++....+..+...... +.|+|+++.+
T Consensus 77 ~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~ 156 (396)
T 3c5m_A 77 EGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWE 156 (396)
T ss_dssp CSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHH
T ss_pred cCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcce
Confidence 111222223789999999999999999999999988766555544332222 3456777766
Q ss_pred EEE-----eCCCcEEEEeCCCCceeEEeecccCCeEEEEeeC-CCe-EEEEeCC------CcEEEEecCCCeeeEEecC-
Q 010296 278 FSG-----SFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLR-KER-VLTVGRD------RSMQLWKVPEESRLVFRAP- 343 (513)
Q Consensus 278 ~~~-----~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~-~~~~~~d------~~i~iwd~~~~~~~~~~~~- 343 (513)
+.+ ..+..|++||+.+++..... .+...+..+.|+| ++. ++.++.+ ..|.+|++.+.....+..+
T Consensus 157 ~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~ 235 (396)
T 3c5m_A 157 KFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHA 235 (396)
T ss_dssp HHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCC
T ss_pred eeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccC
Confidence 544 35678999999988765444 4677889999999 664 5555433 4688899876654433332
Q ss_pred -CCCeeEEEeecCCe-EEEEeCC-----CCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCc
Q 010296 344 -ASSLECCCFISNDE-FLSGSDD-----GSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSY 416 (513)
Q Consensus 344 -~~~v~~~~~~~~~~-~~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 416 (513)
...+..+.|+|+|. |+.++.+ +.|++||+.+++.......
T Consensus 236 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~--------------------------------- 282 (396)
T 3c5m_A 236 EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM--------------------------------- 282 (396)
T ss_dssp TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC---------------------------------
T ss_pred CCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC---------------------------------
Confidence 22477789999996 5554433 3499999988875443221
Q ss_pred CCCCCcceEEEEEEec-CCCEEEEec----------------CCCcEEEEEeCCCCcceeeeeecCccc-----------
Q 010296 417 HSSSAYSWVSSVTVCG-GSDLAASGA----------------GNGSVRLWAIESETKDIQPLYNLPLVG----------- 468 (513)
Q Consensus 417 ~~~~~~~~i~~~~~s~-~~~~l~~g~----------------~dg~v~vwd~~~~~~~~~~~~~~~~~~----------- 468 (513)
.. .. +.|+| +|++|++++ .++.|++||+.++. ...+.. +..
T Consensus 283 --~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~l~~--~~~~~~~~~~~~~~ 351 (396)
T 3c5m_A 283 --PP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS--AQKLCK--HSTSWDVLDGDRQI 351 (396)
T ss_dssp --CS----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB--CCEEEE--CCCCCCCBTTBSST
T ss_pred --CC----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc--eEEccC--CCCccccccccccC
Confidence 00 33 88999 999888754 34789999998762 233332 222
Q ss_pred EEEEEEeecCCCEEEEEecCCCcccccccC
Q 010296 469 FVNSLAFAKSGQFLIAGVGQEPRLGRWGHL 498 (513)
Q Consensus 469 ~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~ 498 (513)
.+..++|+|+|++|+.++..++...+|.+.
T Consensus 352 ~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 352 THPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp TCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 256678999999998886777887787654
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.85 E-value=1.8e-20 Score=189.22 Aligned_cols=230 Identities=10% Similarity=0.002 Sum_probs=164.0
Q ss_pred cccEEEEEEcCCCCEEEEEeC-CCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeC---CCcEEEEeCCC--
Q 010296 220 SKHILALAVSSDGRYLASGGL-DRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSF---DRTVKIWNAED-- 293 (513)
Q Consensus 220 ~~~v~~~~~s~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~-- 293 (513)
..+|++++|+|||++||+++. +|++.||++.+++..+....+...+..++|+|+ +.+++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 456999999999999999887 999999999766654444333368999999999 77777765 45555654432
Q ss_pred -CceeEEeecccCCeEEEEeeCCC--eEEEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEEEeCC----C
Q 010296 294 -RAYISTLFGHQSEVLTIDCLRKE--RVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLSGSDD----G 365 (513)
Q Consensus 294 -~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d----g 365 (513)
+... .+... ..+...+|+|++ .+++.+.++.+.+||+.++....+..+.. ..++|+|+|+ +++++.+ +
T Consensus 100 ~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 100 PGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp TTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEE
T ss_pred CCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCe
Confidence 2222 33322 234456777765 45566666667799999887665444333 7899999997 5556655 7
Q ss_pred CEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCC-
Q 010296 366 SIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNG- 444 (513)
Q Consensus 366 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg- 444 (513)
.|++||+.+++.. .+. .+...+..++|||||++|+++..+|
T Consensus 176 ~i~~~d~~~g~~~-~l~-------------------------------------~~~~~~~~~~~SpDG~~l~~~~~~~~ 217 (582)
T 3o4h_A 176 SLFTSNLSSGGLR-VFD-------------------------------------SGEGSFSSASISPGMKVTAGLETARE 217 (582)
T ss_dssp EEEEEETTTCCCE-EEC-------------------------------------CSSCEEEEEEECTTSCEEEEEECSSC
T ss_pred EEEEEcCCCCCce-Eee-------------------------------------cCCCccccceECCCCCEEEEccCCCe
Confidence 7999999888765 332 2233489999999999999888888
Q ss_pred -cEEEEEeCCCCcceeeeeecCcccEEEEEE--------eecCCCEEEEEecCCCccccccc
Q 010296 445 -SVRLWAIESETKDIQPLYNLPLVGFVNSLA--------FAKSGQFLIAGVGQEPRLGRWGH 497 (513)
Q Consensus 445 -~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~--------~sp~~~~l~~~~~~dg~v~~W~~ 497 (513)
.|++||+.++.. . .+.. +...+..++ |+|||.+++++ +.++++++|.+
T Consensus 218 ~~i~~~d~~~~~~-~-~~~~--~~~~~~~~~~~~~~~~~~spdg~~~~~~-~~~g~~~l~~~ 274 (582)
T 3o4h_A 218 ARLVTVDPRDGSV-E-DLEL--PSKDFSSYRPTAITWLGYLPDGRLAVVA-RREGRSAVFID 274 (582)
T ss_dssp EEEEEECTTTCCE-E-ECCC--SCSHHHHHCCSEEEEEEECTTSCEEEEE-EETTEEEEEET
T ss_pred eEEEEEcCCCCcE-E-EccC--CCcChhhhhhccccceeEcCCCcEEEEE-EcCCcEEEEEE
Confidence 899999988732 2 2222 444455555 99999666666 88999999987
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=2.7e-19 Score=169.37 Aligned_cols=248 Identities=9% Similarity=0.058 Sum_probs=167.5
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEeCC-CcceeeeccCc-CCCeEEEEEecCCCe--EEEEe-------------CC
Q 010296 221 KHILALAVSSDGRYLASGGLDRHIHLWDTR-IQEHIQAFPGH-RGPVSCLTFRQGTSE--LFSGS-------------FD 283 (513)
Q Consensus 221 ~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~--l~~~~-------------~d 283 (513)
..+..++|+|++++|++++.+ .|.+|++. +++........ .+.+.+++|+|++++ ++++. .+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 357789999999999998887 99999987 77664432211 123556899999995 44553 68
Q ss_pred CcEEEEeCC-CCceeEEee----cccCCeEEEEeeCCCeEE-EEe-CCCcEEEEecC-CCeee---EEe--cCCCCeeEE
Q 010296 284 RTVKIWNAE-DRAYISTLF----GHQSEVLTIDCLRKERVL-TVG-RDRSMQLWKVP-EESRL---VFR--APASSLECC 350 (513)
Q Consensus 284 g~i~iwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~~-~~~-~d~~i~iwd~~-~~~~~---~~~--~~~~~v~~~ 350 (513)
+.+.+|++. .++....+. .+...+.+++|+|+++++ ++. .++.|++|++. +++.. ... .+...+..+
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~ 198 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWV 198 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEE
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEe
Confidence 999999997 455544333 245678999999999644 544 36799999998 55543 122 135678899
Q ss_pred EeecCCe-EEEEe-CCCCEEEEecC--CCCeeE---EeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCc-
Q 010296 351 CFISNDE-FLSGS-DDGSIELWSLL--RKKPVY---IVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAY- 422 (513)
Q Consensus 351 ~~~~~~~-~~~~~-~dg~i~iwd~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~- 422 (513)
+|+|+|+ +++++ .++.|.+|++. +++... .+....... ..+.
T Consensus 199 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~------------------------------~g~~~ 248 (365)
T 1jof_A 199 AMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI------------------------------PDRDP 248 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC------------------------------CCBCT
T ss_pred EECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc------------------------------CCccc
Confidence 9999996 44544 47899999875 455432 221110000 0111
Q ss_pred -----ceEEEEE-EecCCCEEEEecCC-C-----cEEEEEeCCCCcceeeee-ecC-cccEEEEEEeec---CCCEEEEE
Q 010296 423 -----SWVSSVT-VCGGSDLAASGAGN-G-----SVRLWAIESETKDIQPLY-NLP-LVGFVNSLAFAK---SGQFLIAG 485 (513)
Q Consensus 423 -----~~i~~~~-~s~~~~~l~~g~~d-g-----~v~vwd~~~~~~~~~~~~-~~~-~~~~v~~v~~sp---~~~~l~~~ 485 (513)
..+..++ |+|+|++|++++.+ + .|.+|++..... +..+. ..+ +...+..++|+| +|++|+++
T Consensus 249 ~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~-~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~ 327 (365)
T 1jof_A 249 ETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS-IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAIT 327 (365)
T ss_dssp TTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC-EEEEEEEEECSSCCTTCCCEEECTTCTTEEEEE
T ss_pred ccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC-EEEeeeeeecCCCCcccceecCCCcCCCEEEEE
Confidence 1488999 99999998877643 2 899999963212 22211 111 233466789999 89999999
Q ss_pred ecCCCcccccccCCC
Q 010296 486 VGQEPRLGRWGHLPA 500 (513)
Q Consensus 486 ~~~dg~v~~W~~~~~ 500 (513)
...++.|.+|++...
T Consensus 328 ~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 328 DDQEGWLEIYRWKDE 342 (365)
T ss_dssp CSSSCEEEEEEEETT
T ss_pred EcCCCeEEEEEEchh
Confidence 556699999988765
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.84 E-value=5.8e-19 Score=183.02 Aligned_cols=281 Identities=10% Similarity=0.054 Sum_probs=183.6
Q ss_pred CCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE
Q 010296 159 RQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG 238 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 238 (513)
.....+++|+|++.+|+++ |++|++|++.+++....+... ....+......++|||||++|+++
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~Spdg~~l~~~ 79 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENS--------------TFDEFGHSINDYSISPDGQFILLE 79 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTT--------------TTTTCCSCCCEEEECTTSSEEEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEech--------------hhhhhcccccceEECCCCCEEEEE
Confidence 3456789999999988886 899999999998865433110 001122223458999999999998
Q ss_pred eCC---------CcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEe-ecccCCe-
Q 010296 239 GLD---------RHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTL-FGHQSEV- 307 (513)
Q Consensus 239 ~~d---------g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v- 307 (513)
+.+ +.+.+||+.+++.. .+..|...+...+|||+|+.|+.+. ++.|++|++.++...... .++...+
T Consensus 80 ~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~ 157 (740)
T 4a5s_A 80 YNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIY 157 (740)
T ss_dssp EEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEE
T ss_pred ECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCcccee
Confidence 865 56779999998865 4666788899999999999998884 689999999887754322 2222222
Q ss_pred ----------------EEEEeeCCCe-EEEEeCC------------------------------------CcEEEEecCC
Q 010296 308 ----------------LTIDCLRKER-VLTVGRD------------------------------------RSMQLWKVPE 334 (513)
Q Consensus 308 ----------------~~~~~~~~~~-~~~~~~d------------------------------------~~i~iwd~~~ 334 (513)
..+.|+|||+ |+.++.| ..|++||+.+
T Consensus 158 ~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~ 237 (740)
T 4a5s_A 158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDS 237 (740)
T ss_dssp ESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTS
T ss_pred cCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCC
Confidence 3588999996 4444321 1588899988
Q ss_pred ---C---eeeEEec------CCCCeeEEEeecCCe-EEEEe----CCCCEEEEecCCCCe----eE---EeecCCCcccC
Q 010296 335 ---E---SRLVFRA------PASSLECCCFISNDE-FLSGS----DDGSIELWSLLRKKP----VY---IVKNAHPLLDG 390 (513)
Q Consensus 335 ---~---~~~~~~~------~~~~v~~~~~~~~~~-~~~~~----~dg~i~iwd~~~~~~----~~---~~~~~~~~~~~ 390 (513)
+ ....+.. +...+..++|+|+|+ ++... .+..|.+||+.+++. .. .+...
T Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~------ 311 (740)
T 4a5s_A 238 LSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMS------ 311 (740)
T ss_dssp CCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEEC------
T ss_pred CCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeecc------
Confidence 6 4444332 566788999999998 33322 234699999988872 11 11111
Q ss_pred CCCcccCcCccccccCCCCCCCCCCcCCCCCcce-----EEEEEEecCCCEEE-Eec-CCC--cEEEEEeCCCCcceeee
Q 010296 391 LKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSW-----VSSVTVCGGSDLAA-SGA-GNG--SVRLWAIESETKDIQPL 461 (513)
Q Consensus 391 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----i~~~~~s~~~~~l~-~g~-~dg--~v~vwd~~~~~~~~~~~ 461 (513)
+..+ ...++|+|||+.|+ ..+ .+| .|++|++..+ ....+
T Consensus 312 ------------------------------~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~--~~~~l 359 (740)
T 4a5s_A 312 ------------------------------TTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK--DCTFI 359 (740)
T ss_dssp ------------------------------SSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCS--SCEES
T ss_pred ------------------------------CCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCC--ceEec
Confidence 1111 23578999999876 554 344 5788887765 22333
Q ss_pred eecCcccEEEEEEeecCCCEEEEEecC----CCcccccccC
Q 010296 462 YNLPLVGFVNSLAFAKSGQFLIAGVGQ----EPRLGRWGHL 498 (513)
Q Consensus 462 ~~~~~~~~v~~v~~sp~~~~l~~~~~~----dg~v~~W~~~ 498 (513)
.. ....|..+. .+|++.|+..+.. .+...||.+.
T Consensus 360 T~--g~~~v~~~~-~~d~~~i~f~~~~~~~~~~~~~ly~v~ 397 (740)
T 4a5s_A 360 TK--GTWEVIGIE-ALTSDYLYYISNEYKGMPGGRNLYKIQ 397 (740)
T ss_dssp CC--SSSCEEEEE-EECSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred cc--CCEEEEEEE-EEeCCEEEEEEecCCCCCceeEEEEEE
Confidence 32 233455443 2456666655344 3456666543
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=1.3e-18 Score=164.77 Aligned_cols=244 Identities=9% Similarity=0.066 Sum_probs=164.7
Q ss_pred cCCCeEEEEECCCCCeEEEEeCCceEEEEeCC-CCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCE--
Q 010296 158 HRQSVTAVALSEDDSKGFSASKDGSILHWDVS-SGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRY-- 234 (513)
Q Consensus 158 h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-- 234 (513)
+...+..++|+|++++|++++.+ .|.+|++. +++..... . ...+ ..+.+++|+|+|++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~-------~----------~~~~-g~~~~~~~spdg~~l~ 98 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEA-------S----------HPIG-GHPRANDADTNTRAIF 98 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEE-------E----------EECC-SSGGGGCTTSCCEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEee-------E----------eecC-CCCccEEECCCCCEEE
Confidence 34568899999999999999888 99999997 66543211 0 0000 12345889999994
Q ss_pred EEEEe-------------CCCcEEEEeCC-Ccceeeecc----CcCCCeEEEEEecCCCeEEEEeC-CCcEEEEeCC-CC
Q 010296 235 LASGG-------------LDRHIHLWDTR-IQEHIQAFP----GHRGPVSCLTFRQGTSELFSGSF-DRTVKIWNAE-DR 294 (513)
Q Consensus 235 l~s~~-------------~dg~i~vwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~-~~ 294 (513)
++++. .+|.+.+|++. .++....+. .+...+.+++|+|+|++|+++.. ++.|++|++. ++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g 178 (365)
T 1jof_A 99 LLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASG 178 (365)
T ss_dssp EEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS
T ss_pred EEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCC
Confidence 44553 68999999997 465543333 24567999999999998887664 6799999998 67
Q ss_pred cee--EEee--cccCCeEEEEeeCCCeEE-EEe-CCCcEEEEecC--CCeee----EEec-CC-----C-------CeeE
Q 010296 295 AYI--STLF--GHQSEVLTIDCLRKERVL-TVG-RDRSMQLWKVP--EESRL----VFRA-PA-----S-------SLEC 349 (513)
Q Consensus 295 ~~~--~~~~--~~~~~v~~~~~~~~~~~~-~~~-~d~~i~iwd~~--~~~~~----~~~~-~~-----~-------~v~~ 349 (513)
+.. ..+. .+...+..++|+|+++++ +++ .++.|.+|++. ++... .... +. . .+..
T Consensus 179 ~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 258 (365)
T 1jof_A 179 EVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRAD 258 (365)
T ss_dssp CEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEE
T ss_pred CEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccccccccc
Confidence 643 2333 235668999999999544 555 47899999875 34321 1111 11 1 4778
Q ss_pred EE-eecCCe-EEEEeC-CC-----CEEEEecC-CCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCC
Q 010296 350 CC-FISNDE-FLSGSD-DG-----SIELWSLL-RKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSS 420 (513)
Q Consensus 350 ~~-~~~~~~-~~~~~~-dg-----~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 420 (513)
++ |+|+|+ ++++.. .. .|.+|++. +++........ ..
T Consensus 259 i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~----------------------------------~~ 304 (365)
T 1jof_A 259 VCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLS----------------------------------PT 304 (365)
T ss_dssp EEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEE----------------------------------EC
T ss_pred EEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeee----------------------------------ec
Confidence 99 999996 444433 22 89999996 56543321100 00
Q ss_pred CcceEEEEEEec---CCCEEEEecCC-CcEEEEEeCCC
Q 010296 421 AYSWVSSVTVCG---GSDLAASGAGN-GSVRLWAIESE 454 (513)
Q Consensus 421 ~~~~i~~~~~s~---~~~~l~~g~~d-g~v~vwd~~~~ 454 (513)
+...+..++|+| +|++|++++.+ +.|.||++...
T Consensus 305 ~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 305 PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 001145688999 89999998864 89999999765
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.83 E-value=5.6e-19 Score=166.18 Aligned_cols=255 Identities=11% Similarity=0.087 Sum_probs=166.3
Q ss_pred cCCCcccchhhhhccC-CCeEEEEECCCCCeEE-EEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcc
Q 010296 144 QKPEATDEFRVLLKHR-QSVTAVALSEDDSKGF-SASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSK 221 (513)
Q Consensus 144 ~~~~~~~~~~~~~~h~-~~V~~~~~s~~~~~l~-t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (513)
++.........+..+. ..+..++|+|++++++ ++..++.|.+||+.+++....+.... ....+..
T Consensus 26 ~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~-------------~~~~~~~ 92 (349)
T 1jmx_B 26 VDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSS-------------VPGEVGR 92 (349)
T ss_dssp EETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCC-------------STTEEEE
T ss_pred EECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccc-------------ccccccc
Confidence 4444444444444332 2588999999998765 55578999999999887665431000 0000023
Q ss_pred cEEEEEEcCCCCEEEEEeCC------------CcEEEEeCCCccee---eeccCcCCCeEEEEEecCCCeEEEEeCCCcE
Q 010296 222 HILALAVSSDGRYLASGGLD------------RHIHLWDTRIQEHI---QAFPGHRGPVSCLTFRQGTSELFSGSFDRTV 286 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~d------------g~i~vwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 286 (513)
.+.+++|+|+|++|++++.+ +.|.+||+.+++.. ..+. +...+.+++|+|+++ +++++ +.|
T Consensus 93 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~--~~i 168 (349)
T 1jmx_B 93 SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG--PDI 168 (349)
T ss_dssp CSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES--SSE
T ss_pred cccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc--CcE
Confidence 47789999999999998865 89999999885543 3333 344688999999999 66654 349
Q ss_pred EEEeCCCCceeEEeecccC------------------------CeEEEEeeCCCeEE--EEeCCCcEEEEecCCCeee--
Q 010296 287 KIWNAEDRAYISTLFGHQS------------------------EVLTIDCLRKERVL--TVGRDRSMQLWKVPEESRL-- 338 (513)
Q Consensus 287 ~iwd~~~~~~~~~~~~~~~------------------------~v~~~~~~~~~~~~--~~~~d~~i~iwd~~~~~~~-- 338 (513)
.+||+.+++.+..+..+.. ....+.+++++... .......+..++..++...
T Consensus 169 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (349)
T 1jmx_B 169 YKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQ 248 (349)
T ss_dssp EEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEE
T ss_pred EEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEec
Confidence 9999999988776643320 22344554432100 0000011112333333222
Q ss_pred EEecCCCCeeEEEeec-CCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcC
Q 010296 339 VFRAPASSLECCCFIS-NDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYH 417 (513)
Q Consensus 339 ~~~~~~~~v~~~~~~~-~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 417 (513)
........+..++++| ++.++..+ ++.|.+||+.+++.+..+.....
T Consensus 249 ~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~------------------------------- 296 (349)
T 1jmx_B 249 EFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDHT------------------------------- 296 (349)
T ss_dssp EEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSSC-------------------------------
T ss_pred ccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcCCCC-------------------------------
Confidence 1222455678899999 88644333 89999999999988777753221
Q ss_pred CCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 418 SSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 418 ~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
+.+++|+|++++|++++.++.|++||+.+.
T Consensus 297 -------~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 297 -------YYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp -------CCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred -------ccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 678999999999988888999999999876
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.82 E-value=4.6e-18 Score=160.10 Aligned_cols=274 Identities=7% Similarity=0.007 Sum_probs=182.0
Q ss_pred CCCeEEEEe------CCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeC---
Q 010296 170 DDSKGFSAS------KDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGL--- 240 (513)
Q Consensus 170 ~~~~l~t~~------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~--- 240 (513)
+++++++.. .|+.|.+||..+++.+..+ ..+..+ .++|+|++++|++++.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i-------------------~~g~~p--~i~~spdg~~lyv~~~~~~ 72 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMV-------------------PTAFNG--HVQVSNDGKKIYTMTTYHE 72 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEE-------------------ECCEEE--EEEECTTSSEEEEEEEEET
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEe-------------------cCCCCC--ceEECCCCCEEEEEEeccc
Confidence 555666543 3779999999988876544 223333 8999999999998863
Q ss_pred -------CCcEEEEeCCCcceeeeccCc------CCCeEEEEEecCCCeEEEEeC--CCcEEEEeCCCCceeEE-eeccc
Q 010296 241 -------DRHIHLWDTRIQEHIQAFPGH------RGPVSCLTFRQGTSELFSGSF--DRTVKIWNAEDRAYIST-LFGHQ 304 (513)
Q Consensus 241 -------dg~i~vwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~ 304 (513)
++.|.+||+.+++.+..+... ......++|+|+|++|+++.. ++.|.+||+.+++.+.. +. ..
T Consensus 73 ~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~ 151 (361)
T 2oiz_A 73 RITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA-AA 151 (361)
T ss_dssp TSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG-GT
T ss_pred ccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec-CC
Confidence 567999999998888776532 345678999999999998864 68999999999988777 54 22
Q ss_pred CCeEEEEeeCCC--eEEEEeCCCcEEEEecCC-Ceee-EE-----ecCCCCeeEEEeecCC-eEEEEeCCCCEEEEecCC
Q 010296 305 SEVLTIDCLRKE--RVLTVGRDRSMQLWKVPE-ESRL-VF-----RAPASSLECCCFISND-EFLSGSDDGSIELWSLLR 374 (513)
Q Consensus 305 ~~v~~~~~~~~~--~~~~~~~d~~i~iwd~~~-~~~~-~~-----~~~~~~v~~~~~~~~~-~~~~~~~dg~i~iwd~~~ 374 (513)
....+.+.|.+ .+++.+.||.+.+|++.. ++.. .. .........+.+++++ .++..+.++.|.++|+..
T Consensus 152 -~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~ 230 (361)
T 2oiz_A 152 -GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSG 230 (361)
T ss_dssp -TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSS
T ss_pred -CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecC
Confidence 22335566754 677888999999999865 3332 11 1111111223334555 456667889999999876
Q ss_pred CCee--EEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecC----------
Q 010296 375 KKPV--YIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAG---------- 442 (513)
Q Consensus 375 ~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~---------- 442 (513)
.... ..+...... .... .........++|+|+++.++++..
T Consensus 231 ~~~~~~~~~~~~~~~------------~~~~---------------~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~ 283 (361)
T 2oiz_A 231 DEVKVDGPWSLLNDE------------DKAK---------------NWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKF 283 (361)
T ss_dssp SSCEEEEEEESCCHH------------HHHT---------------TCEECCSSCEEEETTTTEEEEEEESSCCTTCTTC
T ss_pred CCceecccccccCcc------------cccc---------------ccccCCeeEEEEecCCCeEEEEEccCCCcccccC
Confidence 5422 122110000 0000 000000123689999888776543
Q ss_pred -CCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 443 -NGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 443 -dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
.+.|.+||+.+. +.+..+ +... +.+++|+|+|++|+++ +. +.|.+||..++
T Consensus 284 ~~~~v~viD~~t~-~~v~~i---~~~~-p~~ia~spdg~~l~v~-n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 284 PAAEIWVMDTKTK-QRVARI---PGRD-ALSMTIDQQRNLMLTL-DG-GNVNVYDISQP 335 (361)
T ss_dssp CCSEEEEEETTTT-EEEEEE---ECTT-CCEEEEETTTTEEEEE-CS-SCEEEEECSSS
T ss_pred CCceEEEEECCCC-cEEEEE---ecCC-eeEEEECCCCCEEEEe-CC-CeEEEEECCCC
Confidence 347999999887 333333 3334 9999999999999988 55 99999998776
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.82 E-value=3.2e-17 Score=152.68 Aligned_cols=242 Identities=10% Similarity=0.104 Sum_probs=180.8
Q ss_pred CCCeEEEEECCCCCeEEEEeCC------------------------ceEEEEeCCCCccccccCCChhhhccCCCCCCCC
Q 010296 159 RQSVTAVALSEDDSKGFSASKD------------------------GSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQG 214 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~d------------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (513)
-+.|.+|+++|+|+++++...+ ++|.+||..+++....+
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~----------------- 85 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSS----------------- 85 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEE-----------------
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEecc-----------------
Confidence 5779999999999999888777 47999999888765433
Q ss_pred CCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcc-eeeec---------cCcCCCeEEEEEec-CCCeEEEEe-C
Q 010296 215 RATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQE-HIQAF---------PGHRGPVSCLTFRQ-GTSELFSGS-F 282 (513)
Q Consensus 215 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~ 282 (513)
...+...+..|+++|+|+++++...++.|++|+..... .+..+ ..+......++|+| ++.++++.+ .
T Consensus 86 -~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~ 164 (329)
T 3fvz_A 86 -GKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC 164 (329)
T ss_dssp -CTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS
T ss_pred -CCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC
Confidence 11334568899999999988888889999999976442 44444 23455789999999 777777776 6
Q ss_pred CCcEEEEeCCCCceeEEeec----------ccCCeEEEEeeCC-CeEEEE-eCCCcEEEEecCCCeeeEEe---cCCCCe
Q 010296 283 DRTVKIWNAEDRAYISTLFG----------HQSEVLTIDCLRK-ERVLTV-GRDRSMQLWKVPEESRLVFR---APASSL 347 (513)
Q Consensus 283 dg~i~iwd~~~~~~~~~~~~----------~~~~v~~~~~~~~-~~~~~~-~~d~~i~iwd~~~~~~~~~~---~~~~~v 347 (513)
++.|++|+ .++..+..+.. +-..+..+++.|+ +.++++ ..++.|++|+..++..+... .+...+
T Consensus 165 ~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~ 243 (329)
T 3fvz_A 165 NSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNV 243 (329)
T ss_dssp CCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCE
T ss_pred CCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCc
Confidence 89999999 46666666632 2234789999998 777655 46789999999866655332 344567
Q ss_pred eEEEeecCCeEE-EE-------eCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCC
Q 010296 348 ECCCFISNDEFL-SG-------SDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSS 419 (513)
Q Consensus 348 ~~~~~~~~~~~~-~~-------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 419 (513)
..++++| +.++ +. ..+..|++|++.+++.+..+... .
T Consensus 244 ~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~----------------------------------~ 288 (329)
T 3fvz_A 244 FAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPV----------------------------------R 288 (329)
T ss_dssp EEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCS----------------------------------S
T ss_pred ceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCC----------------------------------C
Confidence 8899999 5433 22 23458999999999988876421 1
Q ss_pred CCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 420 SAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 420 ~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
.+...+..|+++|+|.++++...++.|++|++...
T Consensus 289 ~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 289 KHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp SCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred CccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 22233889999999988888899999999998653
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.82 E-value=2.2e-18 Score=164.78 Aligned_cols=239 Identities=13% Similarity=-0.022 Sum_probs=165.5
Q ss_pred EEEcCCCCEEEEEeC-CC--cEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeec
Q 010296 226 LAVSSDGRYLASGGL-DR--HIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFG 302 (513)
Q Consensus 226 ~~~s~~~~~l~s~~~-dg--~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 302 (513)
.+|+|||++|+.++. ++ .|.+||+.+++......++...+..+.|+|+++.|+.++.++.|++||+.+++....+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 789999999999887 66 488899999988877777766666788999999999999999999999999887666655
Q ss_pred ccCCeEEEE--eeCCCeEEEE-----------------------eCCCcEEEEecCCCeeeEEecCCCCeeEEEeec-CC
Q 010296 303 HQSEVLTID--CLRKERVLTV-----------------------GRDRSMQLWKVPEESRLVFRAPASSLECCCFIS-ND 356 (513)
Q Consensus 303 ~~~~v~~~~--~~~~~~~~~~-----------------------~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~-~~ 356 (513)
+...+.... +++++.++++ ..+..|++||+.++....+..+...+..+.|+| +|
T Consensus 121 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg 200 (388)
T 3pe7_A 121 PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDD 200 (388)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEE
T ss_pred hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCC
Confidence 555454443 4788876653 234789999999887776666677789999999 88
Q ss_pred e-EEEEeC------CCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEE
Q 010296 357 E-FLSGSD------DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVT 429 (513)
Q Consensus 357 ~-~~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 429 (513)
. ++.... ...|.++++.++... .+.... ....+..++
T Consensus 201 ~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~-----------------------------------~~~~~~~~~ 244 (388)
T 3pe7_A 201 STVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHA-----------------------------------EGESCTHEF 244 (388)
T ss_dssp EEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCC-----------------------------------TTEEEEEEE
T ss_pred CEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCC-----------------------------------CCcccccce
Confidence 6 554443 236777787655432 221110 012377889
Q ss_pred EecCCCEEEEecC-CC----cEEEEEeCCCCcceeeeeecCcccE----EEEEEeecCCCEEEEEe--------cCCCcc
Q 010296 430 VCGGSDLAASGAG-NG----SVRLWAIESETKDIQPLYNLPLVGF----VNSLAFAKSGQFLIAGV--------GQEPRL 492 (513)
Q Consensus 430 ~s~~~~~l~~g~~-dg----~v~vwd~~~~~~~~~~~~~~~~~~~----v~~v~~sp~~~~l~~~~--------~~dg~v 492 (513)
|+|+|+.|+..+. ++ .|++||+.++.. ..+...+.... ...++|+|||++|+... ..+..|
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~--~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i 322 (388)
T 3pe7_A 245 WVPDGSALVYVSYLKGSPDRFIYSADPETLEN--RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFL 322 (388)
T ss_dssp ECTTSSCEEEEEEETTCCCEEEEEECTTTCCE--EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEE
T ss_pred ECCCCCEEEEEecCCCCCcceEEEEecCCCce--EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEE
Confidence 9999997765443 22 399999988732 22222221001 11237999999888653 445689
Q ss_pred cccccCCCcc
Q 010296 493 GRWGHLPAAR 502 (513)
Q Consensus 493 ~~W~~~~~~~ 502 (513)
.+|+...+..
T Consensus 323 ~~~d~~~~~~ 332 (388)
T 3pe7_A 323 YVFNMKNGTQ 332 (388)
T ss_dssp EEEETTTTEE
T ss_pred EEEeccCCce
Confidence 9999877543
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.81 E-value=1.8e-17 Score=154.38 Aligned_cols=244 Identities=11% Similarity=0.039 Sum_probs=177.0
Q ss_pred cccEEEEEEcCCCCEEEEEeCC------------------------CcEEEEeCCCcceeeecc-CcCCCeEEEEEecCC
Q 010296 220 SKHILALAVSSDGRYLASGGLD------------------------RHIHLWDTRIQEHIQAFP-GHRGPVSCLTFRQGT 274 (513)
Q Consensus 220 ~~~v~~~~~s~~~~~l~s~~~d------------------------g~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~ 274 (513)
...+.+|+++|+|+++++...+ +.|.+||..+++.+..+. .+......++++|++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4569999999999999888776 479999999888876654 345678999999999
Q ss_pred CeEEEEeCCCcEEEEeCCCCc-eeEEe---------ecccCCeEEEEeeC-CCeEEEEe--CCCcEEEEecCCCeeeEEe
Q 010296 275 SELFSGSFDRTVKIWNAEDRA-YISTL---------FGHQSEVLTIDCLR-KERVLTVG--RDRSMQLWKVPEESRLVFR 341 (513)
Q Consensus 275 ~~l~~~~~dg~i~iwd~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~~~~~--~d~~i~iwd~~~~~~~~~~ 341 (513)
+++++...++.|++|+..... .+..+ ..+...+..+++.| ++.++++. .++.|++|+........+.
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~ 182 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWG 182 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEEC
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEec
Confidence 988888889999999986542 44444 23344688999999 78777665 4899999995443333332
Q ss_pred c----------CCCCeeEEEeecC-Ce-EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCC
Q 010296 342 A----------PASSLECCCFISN-DE-FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENG 409 (513)
Q Consensus 342 ~----------~~~~v~~~~~~~~-~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 409 (513)
. +...+..++++|+ +. +++...++.|++|+..+++.+..+...
T Consensus 183 ~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~------------------------- 237 (329)
T 3fvz_A 183 EESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA------------------------- 237 (329)
T ss_dssp EECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT-------------------------
T ss_pred cCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc-------------------------
Confidence 1 1234788999998 76 556678899999999988888877532
Q ss_pred CCCCCCcCCCCCcceEEEEEEec------CCCEEEEecCCCcEEEEEeCCCCcceeeeee-cCcccEEEEEEeecCCCEE
Q 010296 410 NLNPGSYHSSSAYSWVSSVTVCG------GSDLAASGAGNGSVRLWAIESETKDIQPLYN-LPLVGFVNSLAFAKSGQFL 482 (513)
Q Consensus 410 ~~~~~~~~~~~~~~~i~~~~~s~------~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~-~~~~~~v~~v~~sp~~~~l 482 (513)
.+...+..++|+| +|+.+++...+..|++|++.++ ..+..+.. ..+...+.+|+++|+|.++
T Consensus 238 ----------~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g-~~~~~~~~~~~~~~~p~~ia~~~dG~ly 306 (329)
T 3fvz_A 238 ----------SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSG-EIIDVFKPVRKHFDMPHDIVASEDGTVY 306 (329)
T ss_dssp ----------TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTC-CEEEEECCSSSCCSSEEEEEECTTSEEE
T ss_pred ----------ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCC-eEEEEEcCCCCccCCeeEEEECCCCCEE
Confidence 1122377888888 3333333445568999999887 33333321 1245668999999999555
Q ss_pred EEEecCCCcccccccCCC
Q 010296 483 IAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 483 ~~~~~~dg~v~~W~~~~~ 500 (513)
++. ..+++|++|+....
T Consensus 307 vad-~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 307 IGD-AHTNTVWKFTLTEK 323 (329)
T ss_dssp EEE-SSSCCEEEEEEEEC
T ss_pred EEE-CCCCEEEEEeCCcc
Confidence 555 78889999987543
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=8.3e-17 Score=146.81 Aligned_cols=244 Identities=10% Similarity=0.124 Sum_probs=174.4
Q ss_pred CCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeecc------CcCCCeEEEEEe-cCCCeEEEEeC-CCcEEE
Q 010296 217 TKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFP------GHRGPVSCLTFR-QGTSELFSGSF-DRTVKI 288 (513)
Q Consensus 217 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~------~~~~~v~~~~~~-~~~~~l~~~~~-dg~i~i 288 (513)
.++...+.++++++++.++++...++.|.+|+.. ++.+..+. ++...+..+++. +++.++++... ++.|.+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 3556679999999999988888889999999987 55555553 244578999995 66655555533 889999
Q ss_pred EeCCCCceeEEeec-ccCCeEEEEeeCCCeEEEEe-CCCcEEEEecCCCeeeEEe--cCCCCeeEEEeecCCeEE-EEeC
Q 010296 289 WNAEDRAYISTLFG-HQSEVLTIDCLRKERVLTVG-RDRSMQLWKVPEESRLVFR--APASSLECCCFISNDEFL-SGSD 363 (513)
Q Consensus 289 wd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~-~d~~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~-~~~~ 363 (513)
|+ .+++.+..+.. +...+..+++.+++.++++. .++.|.+|+........+. .+...+..+++++++.++ +...
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 99 56666666532 34568999999998777654 5789999997654433333 334568899999999855 5566
Q ss_pred CCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCC
Q 010296 364 DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGN 443 (513)
Q Consensus 364 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d 443 (513)
++.|++|+. .++.+..+... .+...+..++++++|+++++...+
T Consensus 184 ~~~i~~~~~-~g~~~~~~~~~-----------------------------------g~~~~p~~i~~d~~G~l~v~~~~~ 227 (286)
T 1q7f_A 184 AHCVKVFNY-EGQYLRQIGGE-----------------------------------GITNYPIGVGINSNGEILIADNHN 227 (286)
T ss_dssp GTEEEEEET-TCCEEEEESCT-----------------------------------TTSCSEEEEEECTTCCEEEEECSS
T ss_pred CCEEEEEcC-CCCEEEEEccC-----------------------------------CccCCCcEEEECCCCCEEEEeCCC
Confidence 899999997 44555544321 011238899999999998888887
Q ss_pred C-cEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 444 G-SVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 444 g-~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
+ .|.+|+... ..+..+........+.+++|+|+|+++++. .+++|++|+.....+
T Consensus 228 ~~~i~~~~~~g--~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~--~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 228 NFNLTIFTQDG--QLISALESKVKHAQCFDVALMDDGSVVLAS--KDYRLYIYRYVQLAP 283 (286)
T ss_dssp SCEEEEECTTS--CEEEEEEESSCCSCEEEEEEETTTEEEEEE--TTTEEEEEECSCCCC
T ss_pred CEEEEEECCCC--CEEEEEcccCCCCcceeEEECCCCcEEEEC--CCCeEEEEEcccccc
Confidence 6 999999543 334444332223347899999999866553 589999998866543
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.81 E-value=6.4e-18 Score=157.92 Aligned_cols=275 Identities=9% Similarity=0.043 Sum_probs=190.2
Q ss_pred CCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE
Q 010296 159 RQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG 238 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 238 (513)
...|.+++|++++..++..+.++.+++|. +.....+ ..+...+.+++|+|++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------------~~~~~~~~~~~~~~~g~l~~~~ 62 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTIT---AEPWLEI-------------------SKKGLQLEGLNFDRQGQLFLLD 62 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEEE-------------------ESSCCCEEEEEECTTSCEEEEE
T ss_pred ccccceeeecCCccceeEEeecccCcccc---cceeEEE-------------------eccCccccCcEECCCCCEEEEE
Confidence 34578889999988888778888999993 2222221 2345567899999999988888
Q ss_pred eCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCC----CcEEEEeCCCCceeEEee--cccCCeEEEEe
Q 010296 239 GLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFD----RTVKIWNAEDRAYISTLF--GHQSEVLTIDC 312 (513)
Q Consensus 239 ~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~--~~~~~v~~~~~ 312 (513)
..++.|.+||..+++....+..+...+.+++|+++++++++...+ +.|.+||..++.....+. .....+..+.+
T Consensus 63 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~ 142 (333)
T 2dg1_A 63 VFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVF 142 (333)
T ss_dssp TTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEE
T ss_pred CCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEE
Confidence 889999999998887665544466789999999999877777666 689999998876543332 23456899999
Q ss_pred eCCCeEEEEeCC-------CcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EE-EEeCCCCEEEEecCC-CCeeEEee
Q 010296 313 LRKERVLTVGRD-------RSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FL-SGSDDGSIELWSLLR-KKPVYIVK 382 (513)
Q Consensus 313 ~~~~~~~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~-~~~~dg~i~iwd~~~-~~~~~~~~ 382 (513)
.|++.++.+... +.|..|+..++....+......+..++|+|++. ++ +.+.++.|.+|++.+ +..+..+.
T Consensus 143 d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~ 222 (333)
T 2dg1_A 143 DSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFG 222 (333)
T ss_dssp CTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEE
T ss_pred CCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCccccc
Confidence 999988866653 567777766555443333334578899999985 44 555678999999864 33332221
Q ss_pred cCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeee
Q 010296 383 NAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLY 462 (513)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~ 462 (513)
...... + .. ...+..++++++|+++++...++.|.+|+.. + ..+..+.
T Consensus 223 ~~~~~~-----~------------------------~~-~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g-~~~~~~~ 270 (333)
T 2dg1_A 223 ATIPYY-----F------------------------TG-HEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-G-YPIGQIL 270 (333)
T ss_dssp EEEEEE-----C------------------------CS-SSEEEEEEEBTTCCEEEEEETTTEEEEECTT-S-CEEEEEE
T ss_pred ceEEEe-----c------------------------CC-CCCCCceEECCCCCEEEEEcCCCEEEEECCC-C-CEEEEEE
Confidence 000000 0 00 0237889999999988888788899999984 3 2333332
Q ss_pred ecCcc-----cEEEEEEeecCCCEEEEEecC
Q 010296 463 NLPLV-----GFVNSLAFAKSGQFLIAGVGQ 488 (513)
Q Consensus 463 ~~~~~-----~~v~~v~~sp~~~~l~~~~~~ 488 (513)
. +.. ..+.+++|+|+++.|++++..
T Consensus 271 ~-~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 271 I-PGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp C-TTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred c-CCCccccccCcceEEECCCCCEEEEEeCc
Confidence 2 111 168899999998888766343
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=2e-16 Score=144.30 Aligned_cols=246 Identities=9% Similarity=0.083 Sum_probs=177.1
Q ss_pred hccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE-cCCCCE
Q 010296 156 LKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV-SSDGRY 234 (513)
Q Consensus 156 ~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~ 234 (513)
.+|-..+.+|+++|++.++++...++.|.+|+.. +..+..+.. ......+...+..+++ .+++.+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~-------------~~~~~~~~~~p~~i~~~~~~g~l 91 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGE-------------CGKRDSQLLYPNRVAVVRNSGDI 91 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECC-------------BSSSTTCBSSEEEEEEETTTTEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecc-------------cCCCcccccCceEEEEEcCCCeE
Confidence 3567789999999999988888889999999987 444333210 0011234567899999 467776
Q ss_pred EEEEeC-CCcEEEEeCCCcceeeeccC-cCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEee--cccCCeEEE
Q 010296 235 LASGGL-DRHIHLWDTRIQEHIQAFPG-HRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLF--GHQSEVLTI 310 (513)
Q Consensus 235 l~s~~~-dg~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~ 310 (513)
+++... ++.|.+|+ .+++.+..+.. +...+.+++++++++++++...++.|.+|+.. ++.+..+. .+...+..+
T Consensus 92 ~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i 169 (286)
T 1q7f_A 92 IVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGV 169 (286)
T ss_dssp EEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEE
T ss_pred EEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEE
Confidence 666543 78999999 56776666543 44678999999999877777778999999964 55555553 344568999
Q ss_pred EeeCCCeEEEEe-CCCcEEEEecCCCeeeEEecC--CCCeeEEEeecCCeEE-EEeCCC-CEEEEecCCCCeeEEeecCC
Q 010296 311 DCLRKERVLTVG-RDRSMQLWKVPEESRLVFRAP--ASSLECCCFISNDEFL-SGSDDG-SIELWSLLRKKPVYIVKNAH 385 (513)
Q Consensus 311 ~~~~~~~~~~~~-~d~~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~~-~~~~dg-~i~iwd~~~~~~~~~~~~~~ 385 (513)
++.+++.++++. .++.|++|+........+... ...+..++++++|.++ +...++ .|.+|+. +++.+..+....
T Consensus 170 ~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~ 248 (286)
T 1q7f_A 170 VVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKV 248 (286)
T ss_dssp EECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESS
T ss_pred EECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccC
Confidence 999999877554 588999999865444344332 2568899999999755 444554 9999995 566666554321
Q ss_pred CcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 386 PLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 386 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
. ...+.+++++|+|+++++ +.++.|++|++...
T Consensus 249 ~-----------------------------------~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 249 K-----------------------------------HAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp C-----------------------------------CSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred C-----------------------------------CCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 1 112789999999987777 56899999998654
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.81 E-value=9.5e-18 Score=157.94 Aligned_cols=276 Identities=11% Similarity=0.053 Sum_probs=186.1
Q ss_pred CCCcccchhhhhccCCCeEEEEECCCCCeEEEEe----------CCceEEEEeCCCCccccccCCChhhhccCCCCCCCC
Q 010296 145 KPEATDEFRVLLKHRQSVTAVALSEDDSKGFSAS----------KDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQG 214 (513)
Q Consensus 145 ~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (513)
+....+.+..+..+..+ .++|+|++++|++++ .+++|.+||+.+++.+..+....
T Consensus 37 D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~------------- 101 (361)
T 2oiz_A 37 DYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPP------------- 101 (361)
T ss_dssp ETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECT-------------
T ss_pred ECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCc-------------
Confidence 33444445556556555 899999999999886 36789999999888766541000
Q ss_pred CCCCCcccEEEEEEcCCCCEEEEEeC--CCcEEEEeCCCcceeee-ccCcCCCeEEEEEecCC-CeEEEEeCCCcEEEEe
Q 010296 215 RATKQSKHILALAVSSDGRYLASGGL--DRHIHLWDTRIQEHIQA-FPGHRGPVSCLTFRQGT-SELFSGSFDRTVKIWN 290 (513)
Q Consensus 215 ~~~~~~~~v~~~~~s~~~~~l~s~~~--dg~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd 290 (513)
....+......++|+|+|++|+++.. ++.|.+||+.+++.+.. +.. .....+.+.|++ ..+++.+.||.+.+|+
T Consensus 102 ~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~--~~~~~v~~~p~~~~~~~~~~~dg~~~~v~ 179 (361)
T 2oiz_A 102 KRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA--AGCWSVIPQPNRPRSFMTICGDGGLLTIN 179 (361)
T ss_dssp TBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG--TTEEEEEECTTSSSEEEEEETTSSEEEEE
T ss_pred cccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC--CCcceeEEcCCCCeeEEEECCCCcEEEEE
Confidence 00012234567999999999998874 58999999999998887 653 223446677766 5678888999999999
Q ss_pred CCC-CceeEE------eecccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeeeEEe---cC----------CCCeeE
Q 010296 291 AED-RAYIST------LFGHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRLVFR---AP----------ASSLEC 349 (513)
Q Consensus 291 ~~~-~~~~~~------~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~---~~----------~~~v~~ 349 (513)
+.. ++.... +.....++ .+.+.+++ .++..+.++.|.++|+......... .. ......
T Consensus 180 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~ 258 (361)
T 2oiz_A 180 LGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNL 258 (361)
T ss_dssp ECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSC
T ss_pred ECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeE
Confidence 865 544421 11122222 22334444 5566678899999998755432111 00 112223
Q ss_pred EEeecCCe-EEEEeC-----------CCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcC
Q 010296 350 CCFISNDE-FLSGSD-----------DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYH 417 (513)
Q Consensus 350 ~~~~~~~~-~~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 417 (513)
++++|++. ++++.. .+.|.+||+.+++.+..+....
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-------------------------------- 306 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-------------------------------- 306 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--------------------------------
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--------------------------------
Confidence 68899864 443322 3479999999999988875321
Q ss_pred CCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeec-CcccEEEEEEeecCCC
Q 010296 418 SSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNL-PLVGFVNSLAFAKSGQ 480 (513)
Q Consensus 418 ~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~-~~~~~v~~v~~sp~~~ 480 (513)
+.+++|+|+|++|++++. +.|.+||+.++ .++.+..+ ........++|+|+|+
T Consensus 307 -------p~~ia~spdg~~l~v~n~-~~v~v~D~~t~--~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 307 -------ALSMTIDQQRNLMLTLDG-GNVNVYDISQP--EPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp -------CCEEEEETTTTEEEEECS-SCEEEEECSSS--SCEEEEEETTSCSSEEEEEECCCSC
T ss_pred -------eeEEEECCCCCEEEEeCC-CeEEEEECCCC--cceeeEEeccCCCCcEEEEecCCCC
Confidence 678999999999999887 99999999876 22333442 3556678899999986
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.80 E-value=5.8e-18 Score=173.75 Aligned_cols=291 Identities=8% Similarity=0.000 Sum_probs=187.6
Q ss_pred hhhhhccCCCeEEEEECCCCCeEEEE--eCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEE-----
Q 010296 152 FRVLLKHRQSVTAVALSEDDSKGFSA--SKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHIL----- 224 (513)
Q Consensus 152 ~~~~~~h~~~V~~~~~s~~~~~l~t~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~----- 224 (513)
...+.+|...|..++|++++-++++. +.++...||....+.....+ ..|...+.
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l-------------------~~~~~~~~~~~~~ 76 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESA-------------------LPAPWNVRNRVFE 76 (662)
T ss_dssp HHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEES-------------------SCTTCCBCCCGGG
T ss_pred HHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCccee-------------------CCCCccccccccc
Confidence 45678899999999999887777776 56889999996444333322 22222233
Q ss_pred ----EEEEc--CCCCE-EEEEeC-CCcEEEEeCC--C-cceeeeccC-----cCCCeEEEEEecCCCeEEEEeCC-----
Q 010296 225 ----ALAVS--SDGRY-LASGGL-DRHIHLWDTR--I-QEHIQAFPG-----HRGPVSCLTFRQGTSELFSGSFD----- 283 (513)
Q Consensus 225 ----~~~~s--~~~~~-l~s~~~-dg~i~vwd~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----- 283 (513)
...|+ |||++ |+.++. +..|.+|++. . +. ...+.. |...+.+++|+|+|+.|++++.+
T Consensus 77 ~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~ 155 (662)
T 3azo_A 77 YSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEG 155 (662)
T ss_dssp TCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSS
T ss_pred cCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCC
Confidence 45555 99998 776654 5667777765 2 43 444544 56778999999999999988876
Q ss_pred -----CcEEEEeCCC------CceeEEee-cccCCeEEEEeeCCCeEE-EEeCC--------CcEEEEecC-CC---eee
Q 010296 284 -----RTVKIWNAED------RAYISTLF-GHQSEVLTIDCLRKERVL-TVGRD--------RSMQLWKVP-EE---SRL 338 (513)
Q Consensus 284 -----g~i~iwd~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~-~~~~d--------~~i~iwd~~-~~---~~~ 338 (513)
..|++|++.+ +.. ..+. .+...+..+.|+|+|+.+ .++.+ ..|++|++. ++ ...
T Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~ 234 (662)
T 3azo_A 156 PSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTR 234 (662)
T ss_dssp TTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEE
T ss_pred CCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccE
Confidence 5899999988 544 4444 556678889999999644 45533 479999998 45 333
Q ss_pred EE-ecCCCCeeEEEeecCCeE-EEEeCCC--CEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCC
Q 010296 339 VF-RAPASSLECCCFISNDEF-LSGSDDG--SIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPG 414 (513)
Q Consensus 339 ~~-~~~~~~v~~~~~~~~~~~-~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 414 (513)
.+ ..+...+..+.|+|+|.+ +++..++ .|.+|++.+++...... .+.... .
T Consensus 235 ~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~-~~~~~~------------------~------ 289 (662)
T 3azo_A 235 TLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR-REEEFA------------------G------ 289 (662)
T ss_dssp EEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC-CSSBSS------------------C------
T ss_pred EeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccc-cccccc------------------C------
Confidence 33 334678899999999974 4666777 55556655665433221 111000 0
Q ss_pred CcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCE-EEEEecCCCccc
Q 010296 415 SYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQF-LIAGVGQEPRLG 493 (513)
Q Consensus 415 ~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~-l~~~~~~dg~v~ 493 (513)
..-...+..++|+|+++++++++. +.++||.+......+..+.. +.+.+..+ |++++.. ++++++.+....
T Consensus 290 ----p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~--~~~~~~~~-~s~~~~~~~~~~~~~~~~~~ 361 (662)
T 3azo_A 290 ----PLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAG--PWTEWAAT-LTVSGTRAVGVAASPRTAYE 361 (662)
T ss_dssp ----CCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCS--SCCEEEEE-EEEETTEEEEEEEETTEEEE
T ss_pred ----ccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecC--CCCeEEEE-EecCCCEEEEEEcCCCCCCE
Confidence 000000456899999999999999 99999965533223444432 45667766 1445543 334435554444
Q ss_pred ccc
Q 010296 494 RWG 496 (513)
Q Consensus 494 ~W~ 496 (513)
+|.
T Consensus 362 i~~ 364 (662)
T 3azo_A 362 VVE 364 (662)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.80 E-value=5.5e-17 Score=152.48 Aligned_cols=256 Identities=13% Similarity=0.098 Sum_probs=171.9
Q ss_pred CCeEEEEECCCCCeEEEEe---------CCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC
Q 010296 160 QSVTAVALSEDDSKGFSAS---------KDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS 230 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~t~~---------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 230 (513)
..+..+++ +|++|+... .++.|.+|++.++.... + ..+..++|+|
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~--------------------l----~~~~~~~~Sp 68 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF--------------------I----ENATMPRISP 68 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE--------------------E----ESCEEEEECT
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE--------------------c----ccCCCeEECC
Confidence 45677788 888887542 26789999998876422 1 3478899999
Q ss_pred CCCEEEEEeCC---C--cEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCC----------------------
Q 010296 231 DGRYLASGGLD---R--HIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFD---------------------- 283 (513)
Q Consensus 231 ~~~~l~s~~~d---g--~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------- 283 (513)
+|++|+.++.+ + .|.+|++.+++.......+ . +..++|+|+++.|+.++.+
T Consensus 69 Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 146 (347)
T 2gop_A 69 DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGF 146 (347)
T ss_dssp TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC------
T ss_pred CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCccc
Confidence 99999887753 2 4888898887766554433 3 9999999999998877632
Q ss_pred -----CcEEEEeCCCCceeEEeecccCCeEEEEeeCCCeEE-EEeCC------C-cEEEEecCCCeeeEEecCCCCeeEE
Q 010296 284 -----RTVKIWNAEDRAYISTLFGHQSEVLTIDCLRKERVL-TVGRD------R-SMQLWKVPEESRLVFRAPASSLECC 350 (513)
Q Consensus 284 -----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d------~-~i~iwd~~~~~~~~~~~~~~~v~~~ 350 (513)
..|++|++.+++.+..+.. . .+..+.|+|++ ++ ++..+ . ...+|.+.++....+..+ ..+..+
T Consensus 147 ~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~ 222 (347)
T 2gop_A 147 FDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV 222 (347)
T ss_dssp ---CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE
T ss_pred ccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE
Confidence 5799999998877455554 4 78899999999 55 44433 1 334444334444433333 344433
Q ss_pred EeecCCe-EEEEeCC--------CCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCC
Q 010296 351 CFISNDE-FLSGSDD--------GSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSA 421 (513)
Q Consensus 351 ~~~~~~~-~~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 421 (513)
+|+|. ++.++.+ ..|.+|| +++.. .+. ..+
T Consensus 223 --spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~-~l~------------------------------------~~~ 261 (347)
T 2gop_A 223 --DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVM-GIL------------------------------------DEV 261 (347)
T ss_dssp --EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEE-ESS------------------------------------TTC
T ss_pred --CCCCCEEEEEEccccCCccccceEEEEC--CCceE-ecc------------------------------------ccC
Confidence 88886 6555533 3577777 44432 221 112
Q ss_pred cceEEE-EEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcc-cccccC
Q 010296 422 YSWVSS-VTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRL-GRWGHL 498 (513)
Q Consensus 422 ~~~i~~-~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v-~~W~~~ 498 (513)
...+.. +.|+ ++ ++++++.++.++|| +.++ . ...+. .+.+.|.+++|+| .+++++ +.++.. .+|...
T Consensus 262 ~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g-~-~~~~~--~~~~~v~~~~~s~--~~~~~~-~~~~~~~~l~~~~ 330 (347)
T 2gop_A 262 DRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG-E-IKPIA--KGRHWIMGFDVDE--IVVYLK-ETATRLRELFTWD 330 (347)
T ss_dssp CSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS-S-EEEEE--CSSSEEEEEEESS--SEEEEE-ECSSSCCEEEEES
T ss_pred CcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC-c-eEEEe--cCCCeEEeeeeeC--cEEEEE-cCCCChHHheEeC
Confidence 233775 8999 88 99999999999999 8843 2 23332 3567899999999 666666 444443 777665
No 176
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.79 E-value=2.6e-18 Score=178.07 Aligned_cols=269 Identities=9% Similarity=0.016 Sum_probs=169.0
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCC-----eEEEEEecCCCeEEEEeCC---------CcEEE
Q 010296 223 ILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGP-----VSCLTFRQGTSELFSGSFD---------RTVKI 288 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---------g~i~i 288 (513)
..++.|+|++.+|+++ ++.|++||+.+++....+.+|... ...+.|+|||++|+.++.+ +.+.+
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence 5579999999988886 899999999999988777776543 2448899999999988875 56779
Q ss_pred EeCCCCceeEEeecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeeeEEec--CCC-----------------CeeE
Q 010296 289 WNAEDRAYISTLFGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRA--PAS-----------------SLEC 349 (513)
Q Consensus 289 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~--~~~-----------------~v~~ 349 (513)
||+.+++.. .+..+...+...+|+|+|+.++...++.|++|++.++....+.. +.. ....
T Consensus 97 ~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~ 175 (740)
T 4a5s_A 97 YDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSA 175 (740)
T ss_dssp EETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred EECCCCcEE-EcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcc
Confidence 999998754 45667788999999999976666678999999998776543322 111 1234
Q ss_pred EEeecCCe-EEEEeCC-CCEEEEecCCCC-------eeEEeecCCCcccCCCCcccCcCccccccCCC---CCC-CCCCc
Q 010296 350 CCFISNDE-FLSGSDD-GSIELWSLLRKK-------PVYIVKNAHPLLDGLKNFEQDEGKISNGHSEN---GNL-NPGSY 416 (513)
Q Consensus 350 ~~~~~~~~-~~~~~~d-g~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~-~~~~~ 416 (513)
+.|+|+|+ |+.++.| +.+.+|++.... ....+...... .......+.++.... +.. ....+
T Consensus 176 ~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G------~~~~~~~l~v~d~~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 176 LWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAG------AVNPTVKFFVVNTDSLSSVTNATSIQI 249 (740)
T ss_dssp EEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTT------SCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred eEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCc------CcCCeeEEEEEECCCCCCCCcceEEEe
Confidence 88999996 6655544 447777653111 01111100000 000000122222211 100 00001
Q ss_pred CC----CCCcceEEEEEEecCCCEEEEec----CCCcEEEEEeCCCCc-----ceeeeeecCcccEEE-----EEEeecC
Q 010296 417 HS----SSAYSWVSSVTVCGGSDLAASGA----GNGSVRLWAIESETK-----DIQPLYNLPLVGFVN-----SLAFAKS 478 (513)
Q Consensus 417 ~~----~~~~~~i~~~~~s~~~~~l~~g~----~dg~v~vwd~~~~~~-----~~~~~~~~~~~~~v~-----~v~~sp~ 478 (513)
.. ..+...+..++|+|+|++++... .+..|++||+.++.. ....+....+.+.|. .++|+||
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD 329 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLD 329 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTT
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCC
Confidence 00 12566799999999999766553 234799999998740 112221122333333 6889999
Q ss_pred CCEEE-EEecCCC--cccccccCCC
Q 010296 479 GQFLI-AGVGQEP--RLGRWGHLPA 500 (513)
Q Consensus 479 ~~~l~-~~~~~dg--~v~~W~~~~~ 500 (513)
|+.|+ ..+..+| .|.+|+...+
T Consensus 330 G~~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 330 GNSFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp SSEEEEEEECTTSCEEEEEEETTCS
T ss_pred CCEEEEEEEcCCCceEEEEEECCCC
Confidence 99887 6644555 4666665543
No 177
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.77 E-value=1.4e-14 Score=132.89 Aligned_cols=277 Identities=13% Similarity=0.056 Sum_probs=193.1
Q ss_pred ccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEE
Q 010296 157 KHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLA 236 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 236 (513)
.+...+.+|+++++|+++++...++.|.+|+.. +...... ...+...+.++++++++.+++
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~------------------~~~~~~~~~~i~~~~~g~l~v 72 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYP------------------LPTPDAKVMCLTISSDGEVWF 72 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEE------------------CSSTTCCEEEEEECTTSCEEE
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEec------------------CCcccCceeeEEECCCCCEEE
Confidence 456789999999999987777668999999988 5432211 012345689999999999888
Q ss_pred EEeCCCcEEEEeCCCcce-eeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEE-eecccCCeEEEEeeC
Q 010296 237 SGGLDRHIHLWDTRIQEH-IQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYIST-LFGHQSEVLTIDCLR 314 (513)
Q Consensus 237 s~~~dg~i~vwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~ 314 (513)
+...++.|..|+.. ++. ...+......+.++++.+++.++++...++.|.+|+. +++.... .......+..+++.+
T Consensus 73 ~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~ 150 (299)
T 2z2n_A 73 TENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGS 150 (299)
T ss_dssp EETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT
T ss_pred eCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcC
Confidence 77778899999976 332 2222334567899999999987777777889999998 5544332 223445688999999
Q ss_pred CCeEEEEe-CCCcEEEEecCCCeeeEE--ecCCCCeeEEEeecCCeEEEEe-CCCCEEEEecCCCCeeEEeecCCCcccC
Q 010296 315 KERVLTVG-RDRSMQLWKVPEESRLVF--RAPASSLECCCFISNDEFLSGS-DDGSIELWSLLRKKPVYIVKNAHPLLDG 390 (513)
Q Consensus 315 ~~~~~~~~-~d~~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 390 (513)
++.++++. ..+.|..|+. ++....+ ......+..+++.+++.+..+. ..+.|.+|+. +++... +...
T Consensus 151 ~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~------ 221 (299)
T 2z2n_A 151 DNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIP------ 221 (299)
T ss_dssp TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECS------
T ss_pred CCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECC------
Confidence 98877665 4688999998 5554433 2334567889999988765554 5788999998 665332 2111
Q ss_pred CCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEE
Q 010296 391 LKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFV 470 (513)
Q Consensus 391 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v 470 (513)
.....+.+++++++|+++++...++.|.+|+. ++ .+..+....+...+
T Consensus 222 -----------------------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g--~~~~~~~~~~~~~~ 269 (299)
T 2z2n_A 222 -----------------------------TPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NN--IIEEYPIQIKSAEP 269 (299)
T ss_dssp -----------------------------STTCCEEEEEECSTTCEEEEETTTTEEEEEET-TT--EEEEEECSSSSCCE
T ss_pred -----------------------------CCCCCceeEEECCCCCEEEeccCCceEEEECC-CC--ceEEEeCCCCCCcc
Confidence 11123889999999997777767889999998 33 22322221234568
Q ss_pred EEEEeecCCCEEEEEecCCCcccccccC
Q 010296 471 NSLAFAKSGQFLIAGVGQEPRLGRWGHL 498 (513)
Q Consensus 471 ~~v~~sp~~~~l~~~~~~dg~v~~W~~~ 498 (513)
.++++ ++|.++++. . .+.|..++..
T Consensus 270 ~~i~~-~~g~l~v~~-~-~~~l~~~~~~ 294 (299)
T 2z2n_A 270 HGICF-DGETIWFAM-E-CDKIGKLTLI 294 (299)
T ss_dssp EEEEE-CSSCEEEEE-T-TTEEEEEEEC
T ss_pred ceEEe-cCCCEEEEe-c-CCcEEEEEcC
Confidence 99999 888877766 4 4556556544
No 178
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.76 E-value=6e-16 Score=143.79 Aligned_cols=264 Identities=9% Similarity=0.006 Sum_probs=186.5
Q ss_pred CCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeec
Q 010296 179 KDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAF 258 (513)
Q Consensus 179 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 258 (513)
.+++|.+||..+++....++.... ..........+.+. .++++++...++.|.+||..+++.+..+
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n-------------~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i 80 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRAN-------------GFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRI 80 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHH-------------SSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhc-------------CcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEc
Confidence 379999999999887654311000 01122346777775 3555566666799999999999998888
Q ss_pred cCcCCCeEEEEEecCCCeEEEEe-CCCcEEEEeCCCCceeEEeeccc-----CCeEEEEeeCCCeEEEEe--CCCcEEEE
Q 010296 259 PGHRGPVSCLTFRQGTSELFSGS-FDRTVKIWNAEDRAYISTLFGHQ-----SEVLTIDCLRKERVLTVG--RDRSMQLW 330 (513)
Q Consensus 259 ~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~--~d~~i~iw 330 (513)
. .......+++++++ .|+++. .++.|.+||+.+++....+.... .....+++ .+++++++. .++.|.+|
T Consensus 81 ~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~vi 157 (328)
T 3dsm_A 81 T-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKI 157 (328)
T ss_dssp E-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEE
T ss_pred C-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEE
Confidence 5 45678999999988 455554 78999999999998877665332 14556666 567777665 48899999
Q ss_pred ecCCCeeeEEecCCCCeeEEEeecCCeEEEEeC-C----------CCEEEEecCCCCeeEEeecCCCcccCCCCcccCcC
Q 010296 331 KVPEESRLVFRAPASSLECCCFISNDEFLSGSD-D----------GSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEG 399 (513)
Q Consensus 331 d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (513)
|+.+.+.............+.++++|+++.++. + +.|.+||..+++....+.....
T Consensus 158 D~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g------------- 224 (328)
T 3dsm_A 158 DTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG------------- 224 (328)
T ss_dssp ETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT-------------
T ss_pred ECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC-------------
Confidence 999887764444445567888999998665443 3 6899999999887766643211
Q ss_pred ccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCC
Q 010296 400 KISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSG 479 (513)
Q Consensus 400 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~ 479 (513)
.....++|+|++++|+++.. .|.+||+.++......+.. ........++++|++
T Consensus 225 -----------------------~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~-~~~~~p~gi~vdp~~ 278 (328)
T 3dsm_A 225 -----------------------DWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLE-FRDTKYYGLTVNPNN 278 (328)
T ss_dssp -----------------------CCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBC-CCSSCEEEEEECTTT
T ss_pred -----------------------CCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeec-CCCCceEEEEEcCCC
Confidence 12789999999999888765 8999999876321111111 013568899999976
Q ss_pred CEEEEEe----cCCCcccccccC
Q 010296 480 QFLIAGV----GQEPRLGRWGHL 498 (513)
Q Consensus 480 ~~l~~~~----~~dg~v~~W~~~ 498 (513)
..|.++. ..+++|.+|+..
T Consensus 279 g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 279 GEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CCEEEEECTTSSSEEEEEEECTT
T ss_pred CeEEEEcccccccCCEEEEECCC
Confidence 6666665 567899999876
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=1.7e-16 Score=162.74 Aligned_cols=213 Identities=8% Similarity=-0.024 Sum_probs=143.2
Q ss_pred chhhhhccCCCeE---------EEEEC--CCCCe-EEEEeC-CceEEEEeCC--C-CccccccCCChhhhccCCCCCCCC
Q 010296 151 EFRVLLKHRQSVT---------AVALS--EDDSK-GFSASK-DGSILHWDVS--S-GKGVKYLWPSEEVLKSHGAKDPQG 214 (513)
Q Consensus 151 ~~~~~~~h~~~V~---------~~~~s--~~~~~-l~t~~~-dg~v~iwd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~ 214 (513)
..+.+..|...|. ...|+ |||++ |+.++. +..|.+|++. + +.. ..+.. .
T Consensus 59 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~-~~l~~-------~------- 123 (662)
T 3azo_A 59 AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP-RPLTP-------V------- 123 (662)
T ss_dssp CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCC-EECSC-------C-------
T ss_pred CcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCC-EeccC-------C-------
Confidence 3455666666655 55555 99998 776553 5667777765 2 332 22200 0
Q ss_pred CCCCCcccEEEEEEcCCCCEEEEEeCC----------CcEEEEeCCC------cceeeecc-CcCCCeEEEEEecCCCeE
Q 010296 215 RATKQSKHILALAVSSDGRYLASGGLD----------RHIHLWDTRI------QEHIQAFP-GHRGPVSCLTFRQGTSEL 277 (513)
Q Consensus 215 ~~~~~~~~v~~~~~s~~~~~l~s~~~d----------g~i~vwd~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l 277 (513)
....|...+.+++|+|+|+.|++++.+ ..|++|++.+ +... .+. .+...+..++|+|+|++|
T Consensus 124 ~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~l 202 (662)
T 3azo_A 124 SAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQA 202 (662)
T ss_dssp CCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEE
T ss_pred ccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCCEE
Confidence 001156778999999999999998876 5899999988 5543 444 556678889999999999
Q ss_pred EEEeCC--------CcEEEEeCC-CC---ceeEEeecccCCeEEEEeeCCCeEE-EEeCCC--cEEEEecCCCeeeEEec
Q 010296 278 FSGSFD--------RTVKIWNAE-DR---AYISTLFGHQSEVLTIDCLRKERVL-TVGRDR--SMQLWKVPEESRLVFRA 342 (513)
Q Consensus 278 ~~~~~d--------g~i~iwd~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~--~i~iwd~~~~~~~~~~~ 342 (513)
+.++.+ ..|++||+. ++ +.......+...+..+.|+|+++++ ++..++ .|++|++.++....+..
T Consensus 203 a~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~ 282 (662)
T 3azo_A 203 VWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR 282 (662)
T ss_dssp EEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC
T ss_pred EEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccc
Confidence 977755 379999998 56 4444444457889999999999766 455567 67777765665543333
Q ss_pred CCCC---------eeEEEeecCCe-EEEEeCCCCEEEE--ecCCCCeeEEe
Q 010296 343 PASS---------LECCCFISNDE-FLSGSDDGSIELW--SLLRKKPVYIV 381 (513)
Q Consensus 343 ~~~~---------v~~~~~~~~~~-~~~~~~dg~i~iw--d~~~~~~~~~~ 381 (513)
+... +..++|++++. ++++.. +.++|| |+.+++ +..+
T Consensus 283 ~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l 331 (662)
T 3azo_A 283 REEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDA 331 (662)
T ss_dssp CSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEEC
T ss_pred ccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEe
Confidence 2221 45688888887 456667 999999 544444 4444
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.74 E-value=6.1e-17 Score=155.08 Aligned_cols=239 Identities=10% Similarity=-0.051 Sum_probs=160.1
Q ss_pred cEEEEEEcCCCCEEEEEeCC---CcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeE
Q 010296 222 HILALAVSSDGRYLASGGLD---RHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYIS 298 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 298 (513)
.+..++|+|+|++|+..... ..|.+|++.+++.......+......+.|+|++++|+.++.++.|++|++.+++...
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE
Confidence 36678999999998877543 478899998887655444333333347899999999999999999999999887655
Q ss_pred EeecccCCeEE-------------------EEeeCCCeEE-EE-----eCCCcEEEEecCCCeeeEEecCCCCeeEEEee
Q 010296 299 TLFGHQSEVLT-------------------IDCLRKERVL-TV-----GRDRSMQLWKVPEESRLVFRAPASSLECCCFI 353 (513)
Q Consensus 299 ~~~~~~~~v~~-------------------~~~~~~~~~~-~~-----~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~ 353 (513)
....+...... +.|+|++..+ .+ ..+..|++||+.++.......+...+..+.|+
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~s 196 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYR 196 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceEC
Confidence 44433332222 2455665433 21 35678999999888776555666778899999
Q ss_pred c-CCe-EEEEeCC------CCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceE
Q 010296 354 S-NDE-FLSGSDD------GSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWV 425 (513)
Q Consensus 354 ~-~~~-~~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i 425 (513)
| ++. ++..+.+ ..|.+|++.+++... +.... ....+
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~-----------------------------------~~~~~ 240 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHA-----------------------------------EGESC 240 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCC-----------------------------------TTEEE
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccC-----------------------------------CCccc
Confidence 9 665 5544433 468888876554322 11100 01237
Q ss_pred EEEEEecCCCEEEEecCC-----CcEEEEEeCCCCcceeeeeecCcccEEEEEEeec-CCCEEEEEec------------
Q 010296 426 SSVTVCGGSDLAASGAGN-----GSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAK-SGQFLIAGVG------------ 487 (513)
Q Consensus 426 ~~~~~s~~~~~l~~g~~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp-~~~~l~~~~~------------ 487 (513)
..++|+|+|++|+.++.+ +.|++||+.++. ...+...+ + .. +.|+| +|++|+++.+
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~--~~~l~~~~--~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~ 314 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE--NEEVMVMP--P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSY 314 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC--EEEEEECC--S-EE-EEEECSSSSEEEEEECCC----------
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCCCC--eEEeeeCC--C-CC-CCccCCCCceEEEecCCcceeecccccc
Confidence 889999999987776543 449999998762 22233222 2 23 89999 9998887632
Q ss_pred ---CCCcccccccCCCcc
Q 010296 488 ---QEPRLGRWGHLPAAR 502 (513)
Q Consensus 488 ---~dg~v~~W~~~~~~~ 502 (513)
.+..|.+|+...+..
T Consensus 315 ~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 315 NIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp CCCCCCEEEEEETTTTBC
T ss_pred ccCCCCcEEEEecccCce
Confidence 346899998876543
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.74 E-value=5.1e-16 Score=159.77 Aligned_cols=244 Identities=11% Similarity=0.040 Sum_probs=166.5
Q ss_pred CCcccEEEEEEcCCCCEEEE-----EeCCCcEEEEeCCCcceeeeccCcCCCe--EEEEEecCCCeEEEEeCCCc-----
Q 010296 218 KQSKHILALAVSSDGRYLAS-----GGLDRHIHLWDTRIQEHIQAFPGHRGPV--SCLTFRQGTSELFSGSFDRT----- 285 (513)
Q Consensus 218 ~~~~~v~~~~~s~~~~~l~s-----~~~dg~i~vwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~dg~----- 285 (513)
+|...+.+++|||||++||. |+.+..|++||+.+++.+.. .+...+ ..++|+|+|+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV--DVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS--CCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC--cccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 56667999999999999984 33456899999999886511 121222 67999999999999988776
Q ss_pred --------EEEEeCCCCc----eeEEeecccCCeEEEEeeCCCe-EEEEeCCC----cEEEEecCCCeeeEEecCCCCee
Q 010296 286 --------VKIWNAEDRA----YISTLFGHQSEVLTIDCLRKER-VLTVGRDR----SMQLWKVPEESRLVFRAPASSLE 348 (513)
Q Consensus 286 --------i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~----~i~iwd~~~~~~~~~~~~~~~v~ 348 (513)
|++|++.++. ++.....+...+..+.|+|+|+ ++.++.++ .|++|+..++....+..+...+.
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 275 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKY 275 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCE
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceE
Confidence 9999999876 3333334556788999999985 44555444 67777766555555555555566
Q ss_pred EEEeecCCeEEEEeC----CCCEEEEecCCCCe--eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCc
Q 010296 349 CCCFISNDEFLSGSD----DGSIELWSLLRKKP--VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAY 422 (513)
Q Consensus 349 ~~~~~~~~~~~~~~~----dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 422 (513)
...+ +++.++..+. ++.|.+|++.++.. ...+...+ ..
T Consensus 276 ~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-----------------------------------~~ 319 (695)
T 2bkl_A 276 EVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED-----------------------------------SS 319 (695)
T ss_dssp EEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC-----------------------------------SS
T ss_pred EEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC-----------------------------------CC
Confidence 6666 4444554443 57899999887653 12222111 11
Q ss_pred ceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEe---cCCCcccccccCC
Q 010296 423 SWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGV---GQEPRLGRWGHLP 499 (513)
Q Consensus 423 ~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~---~~dg~v~~W~~~~ 499 (513)
..+..++|+ ++.++++...|+..+||.+.........+. .+..+.|..++++|++..|+.+. ...++|.+|++.+
T Consensus 320 ~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 320 ASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQ-LPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECC-CSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred CeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEec-CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 237788888 677888999999988887763222233322 23467888999999998777442 2347899999876
Q ss_pred Cc
Q 010296 500 AA 501 (513)
Q Consensus 500 ~~ 501 (513)
+.
T Consensus 398 g~ 399 (695)
T 2bkl_A 398 GK 399 (695)
T ss_dssp CC
T ss_pred Cc
Confidence 64
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.73 E-value=5.3e-15 Score=146.20 Aligned_cols=312 Identities=14% Similarity=0.070 Sum_probs=207.3
Q ss_pred CCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 010296 169 EDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWD 248 (513)
Q Consensus 169 ~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd 248 (513)
|.+.++++...+++|.++|..+++.+..+ .....+..+.|+|+|++|++++.++.|.+||
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i--------------------~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD 224 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVL--------------------DTGYAVHISRLSASGRYLFVIGRDGKVNMID 224 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEE--------------------ECSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEE--------------------eCCCCccceEECCCCCEEEEEcCCCeEEEEE
Confidence 44556667788999999999999887755 1233467899999999999999999999999
Q ss_pred CC--CcceeeeccCcCCCeEEEEEe----cCCCeEEEEe-CCCcEEEEeCCCCceeEEeecc-----------cCCeEEE
Q 010296 249 TR--IQEHIQAFPGHRGPVSCLTFR----QGTSELFSGS-FDRTVKIWNAEDRAYISTLFGH-----------QSEVLTI 310 (513)
Q Consensus 249 ~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~-----------~~~v~~~ 310 (513)
+. +++.+..+.... ....++|+ |+|+++++++ .+++|.|+|..+.+.+..+... ...+..+
T Consensus 225 ~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i 303 (567)
T 1qks_A 225 LWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAI 303 (567)
T ss_dssp TTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEE
T ss_pred CCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEE
Confidence 96 788887777533 46789999 6999988665 4699999999999888776421 1256778
Q ss_pred EeeCCC-eEE-EEeCCCcEEEEecCCCeee--EEecCCCCeeEEEeecCCe-E-EEEeCCCCEEEEecCCCCeeEEeec-
Q 010296 311 DCLRKE-RVL-TVGRDRSMQLWKVPEESRL--VFRAPASSLECCCFISNDE-F-LSGSDDGSIELWSLLRKKPVYIVKN- 383 (513)
Q Consensus 311 ~~~~~~-~~~-~~~~d~~i~iwd~~~~~~~--~~~~~~~~v~~~~~~~~~~-~-~~~~~dg~i~iwd~~~~~~~~~~~~- 383 (513)
..++++ .++ .....|.|.++|....... ...........+.|+|+++ | ++...++.|.++|+.+++.+..+..
T Consensus 304 ~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vg 383 (567)
T 1qks_A 304 LASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTG 383 (567)
T ss_dssp EECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred EEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEecc
Confidence 777765 333 5556799999998765432 2233445567889999996 3 3555788999999999998877765
Q ss_pred CCCcc--cCCCCcccCcC-----------ccccccCCCCCCCCCCcC---C-CCCcceEEEEEEecCCCEEEEecC----
Q 010296 384 AHPLL--DGLKNFEQDEG-----------KISNGHSENGNLNPGSYH---S-SSAYSWVSSVTVCGGSDLAASGAG---- 442 (513)
Q Consensus 384 ~~~~~--~~~~~~~~~~~-----------~i~~~~~~~~~~~~~~~~---~-~~~~~~i~~~~~s~~~~~l~~g~~---- 442 (513)
..... .....+.++.+ .+.++...........+. . ......-..+.++|++++|.+...
T Consensus 384 g~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~ 463 (567)
T 1qks_A 384 GQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPE 463 (567)
T ss_dssp SSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSS
T ss_pred CcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCC
Confidence 22111 11111222222 222222221110000000 0 000111234668999999888663
Q ss_pred ---CCcEEEEEeCCC-----Ccceeeee-----ecC-cccEEEEEEeecCCCEEEEEec----CCCcccccccCCCc
Q 010296 443 ---NGSVRLWAIESE-----TKDIQPLY-----NLP-LVGFVNSLAFAKSGQFLIAGVG----QEPRLGRWGHLPAA 501 (513)
Q Consensus 443 ---dg~v~vwd~~~~-----~~~~~~~~-----~~~-~~~~v~~v~~sp~~~~l~~~~~----~dg~v~~W~~~~~~ 501 (513)
.++|.|+|+.+. ...+..+. .++ ....+..+.|+|+|+++.++.. .++.|.++|..+..
T Consensus 464 ~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 464 AEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp HHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred cccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 359999999876 22222221 111 2457899999999999887743 37899999877654
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.73 E-value=1.7e-15 Score=138.90 Aligned_cols=240 Identities=11% Similarity=0.029 Sum_probs=170.4
Q ss_pred chhhhhccCCCeEEEEECCCCC-eEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEc
Q 010296 151 EFRVLLKHRQSVTAVALSEDDS-KGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVS 229 (513)
Q Consensus 151 ~~~~~~~h~~~V~~~~~s~~~~-~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 229 (513)
.+..+..+.....+++|+|+++ +++++..++.|.+|+..++ ...+ ..+...+.+++++
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~-------------------~~~~~~~~~l~~~ 77 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPE-------------------MHPSHHQNGHCLN 77 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEE-------------------ESSCSSEEEEEEC
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEE-------------------ECCCCCcceeeEC
Confidence 3445556677889999999998 7778888999999999876 3322 2345668999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCcceeeeccC----cCCCeEEEEEecCCCeEEE----Ee-------------CCCcEEE
Q 010296 230 SDGRYLASGGLDRHIHLWDTRIQEHIQAFPG----HRGPVSCLTFRQGTSELFS----GS-------------FDRTVKI 288 (513)
Q Consensus 230 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~----~~-------------~dg~i~i 288 (513)
|+|+++++...++.|.+|+..+++....... ....+..++++|+|+++++ ++ ..+.|..
T Consensus 78 ~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~ 157 (296)
T 3e5z_A 78 KQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFR 157 (296)
T ss_dssp TTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEE
T ss_pred CCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEE
Confidence 9999888777778999999988875443322 1235678999999998887 33 1346666
Q ss_pred EeCCCCceeEEeecccCCeEEEEeeCCCeEE-EEeCCCcEEEEecC-CCee----eEEecCCCCeeEEEeecCCeEEEEe
Q 010296 289 WNAEDRAYISTLFGHQSEVLTIDCLRKERVL-TVGRDRSMQLWKVP-EESR----LVFRAPASSLECCCFISNDEFLSGS 362 (513)
Q Consensus 289 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~-~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~ 362 (513)
++.. ++ +..+..+...+..++|+|++.++ +.+.++.|++|++. .+.. ..+......+..+++.++|.+.++.
T Consensus 158 ~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 158 LAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp ECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE
T ss_pred ECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc
Confidence 6665 43 34445566678899999998655 44457899999986 3333 1223344556789999999877766
Q ss_pred CCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEE-ecCCCEEEEec
Q 010296 363 DDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTV-CGGSDLAASGA 441 (513)
Q Consensus 363 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~g~ 441 (513)
++.|.+|+.. ++.+..+.... . +++++| +|+++.|++++
T Consensus 236 -~~~v~~~~~~-g~~~~~~~~~~-------------------------------------~-~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 236 -GDGVHVLTPD-GDELGRVLTPQ-------------------------------------T-TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp -TTEEEEECTT-SCEEEEEECSS-------------------------------------C-CCEEEEESTTSCEEEEEE
T ss_pred -CCeEEEECCC-CCEEEEEECCC-------------------------------------C-ceeEEEECCCCCEEEEEc
Confidence 8899999986 66666654221 2 778889 58998888888
Q ss_pred CCCcEEEEEeCCC
Q 010296 442 GNGSVRLWAIESE 454 (513)
Q Consensus 442 ~dg~v~vwd~~~~ 454 (513)
.++ |.-++..+.
T Consensus 276 ~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 276 STE-FWSIETNVR 287 (296)
T ss_dssp TTE-EEEEECSCC
T ss_pred CCe-EEEEEcccc
Confidence 763 444444443
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=1.8e-15 Score=156.16 Aligned_cols=241 Identities=10% Similarity=0.018 Sum_probs=169.0
Q ss_pred ccCCCeEEEEECCCCCeEEEEeCCc-----eEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC
Q 010296 157 KHRQSVTAVALSEDDSKGFSASKDG-----SILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD 231 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~t~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 231 (513)
+|...+..++|||||++||.+..++ .|++||+.+++..... .....+..++|+||
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~--------------------~~~~~~~~~~wspD 181 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV--------------------LERVKFSCMAWTHD 181 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE--------------------EEEECSCCEEECTT
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc--------------------ccCcccceEEEEeC
Confidence 4555789999999999999765433 8999999998765421 11122567999999
Q ss_pred CCEEEEEeCCCc----------------EEEEeCCCcce----eeeccCcCCCeEEEEEecCCCeEEEEeC-----CCcE
Q 010296 232 GRYLASGGLDRH----------------IHLWDTRIQEH----IQAFPGHRGPVSCLTFRQGTSELFSGSF-----DRTV 286 (513)
Q Consensus 232 ~~~l~s~~~dg~----------------i~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i 286 (513)
|+.|+.++.++. |++|++.++.. +.....|...+..+.|+|+|++|+.++. +..|
T Consensus 182 g~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l 261 (710)
T 2xdw_A 182 GKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRL 261 (710)
T ss_dssp SSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEE
T ss_pred CCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEE
Confidence 999999887765 99999988762 2233335566889999999999887664 5689
Q ss_pred EEEeCCC------Cc-eeEEeecccCCeEEEEeeCCC-eEEEEeC----CCcEEEEecCCCee---eEEecCCC--CeeE
Q 010296 287 KIWNAED------RA-YISTLFGHQSEVLTIDCLRKE-RVLTVGR----DRSMQLWKVPEESR---LVFRAPAS--SLEC 349 (513)
Q Consensus 287 ~iwd~~~------~~-~~~~~~~~~~~v~~~~~~~~~-~~~~~~~----d~~i~iwd~~~~~~---~~~~~~~~--~v~~ 349 (513)
++||+.+ +. ....+..+...+... |++++ .++..+. ...|.+|++.+... ..+..+.. .+..
T Consensus 262 ~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~ 340 (710)
T 2xdw_A 262 WYCDLQQESNGITGILKWVKLIDNFEGEYDY-VTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEW 340 (710)
T ss_dssp EEEEGGGSSSSSCSSCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEE
T ss_pred EEEECcccccccCCccceEEeeCCCCcEEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEE
Confidence 9999976 43 355566666665553 66655 5555544 23699999987641 33344433 5777
Q ss_pred EEeecCCe-EEEEeCCCC--EEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEE
Q 010296 350 CCFISNDE-FLSGSDDGS--IELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVS 426 (513)
Q Consensus 350 ~~~~~~~~-~~~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~ 426 (513)
+.|++++. +++...++. |.+|++.+++.+..+... ...+.
T Consensus 341 ~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~-------------------------------------~~~v~ 383 (710)
T 2xdw_A 341 VACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE-------------------------------------VGSVV 383 (710)
T ss_dssp EEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC-------------------------------------SSEEE
T ss_pred EEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC-------------------------------------CceEE
Confidence 88887776 556777774 566777677766665422 23388
Q ss_pred EEEEecCCCEEEEe----cCCCcEEEEEeCCCC
Q 010296 427 SVTVCGGSDLAASG----AGNGSVRLWAIESET 455 (513)
Q Consensus 427 ~~~~s~~~~~l~~g----~~dg~v~vwd~~~~~ 455 (513)
.++++|++..|+.. ...+.|++||+.++.
T Consensus 384 ~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 384 GYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 89999998766533 244789999998763
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=5.9e-15 Score=152.28 Aligned_cols=244 Identities=9% Similarity=0.018 Sum_probs=165.6
Q ss_pred CCcccEEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCc-------
Q 010296 218 KQSKHILALAVSSDGRYLASGGLDR-----HIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRT------- 285 (513)
Q Consensus 218 ~~~~~v~~~~~s~~~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~------- 285 (513)
+|...+..++|||||++||.+..++ .|++||+.+++.+.....+ ..+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3555789999999999998776543 8999999999876543222 23678999999999998888766
Q ss_pred ---------EEEEeCCCCce----eEEeecccCCeEEEEeeCCCeEE-EEeC-----CCcEEEEecCC------C--eee
Q 010296 286 ---------VKIWNAEDRAY----ISTLFGHQSEVLTIDCLRKERVL-TVGR-----DRSMQLWKVPE------E--SRL 338 (513)
Q Consensus 286 ---------i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~-~~~~-----d~~i~iwd~~~------~--~~~ 338 (513)
|++|++.+++. +.....+...+..+.|+|+++.+ .++. +..|++||+.+ + ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 99999988763 22222245567899999998644 4432 56899999976 4 334
Q ss_pred EEecCCCCeeEEEeecCC-eEEEEeC----CCCEEEEecCCCCe--eEEeecCCCcccCCCCcccCcCccccccCCCCCC
Q 010296 339 VFRAPASSLECCCFISND-EFLSGSD----DGSIELWSLLRKKP--VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNL 411 (513)
Q Consensus 339 ~~~~~~~~v~~~~~~~~~-~~~~~~~----dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 411 (513)
.+..+...+.. .|+++| .|+..+. .+.|.+|++.++.. ...+.....
T Consensus 281 ~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~------------------------- 334 (710)
T 2xdw_A 281 KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE------------------------- 334 (710)
T ss_dssp EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-------------------------
T ss_pred EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC-------------------------
Confidence 45555555544 466666 4554433 33699999887642 223321111
Q ss_pred CCCCcCCCCCcceEEEEEEecCCCEEEEecCCCc--EEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEe---
Q 010296 412 NPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGS--VRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGV--- 486 (513)
Q Consensus 412 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~--v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~--- 486 (513)
...+..++|++++.++++...++. |++|++.++ ..+..+.. +.+.|..++++|++..|+.+.
T Consensus 335 ----------~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g-~~~~~l~~--~~~~v~~~~~s~d~~~l~~~~ss~ 401 (710)
T 2xdw_A 335 ----------KDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATG-ALLKIFPL--EVGSVVGYSGQKKDTEIFYQFTSF 401 (710)
T ss_dssp ----------SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTC-CEEEEECC--CSSEEEEEECCTTCSEEEEEEECS
T ss_pred ----------CCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCC-CEEEecCC--CCceEEEEecCCCCCEEEEEEeCC
Confidence 123888999988888888888885 455565455 23333332 367899999999998766432
Q ss_pred cCCCcccccccCCCc
Q 010296 487 GQEPRLGRWGHLPAA 501 (513)
Q Consensus 487 ~~dg~v~~W~~~~~~ 501 (513)
...++|.+|++.++.
T Consensus 402 ~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 402 LSPGIIYHCDLTKEE 416 (710)
T ss_dssp SCCCEEEEEETTSSS
T ss_pred CCCCEEEEEECCCCc
Confidence 245789999987654
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.73 E-value=4e-15 Score=136.36 Aligned_cols=225 Identities=9% Similarity=-0.006 Sum_probs=161.6
Q ss_pred CCcccEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCce
Q 010296 218 KQSKHILALAVSSDGR-YLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAY 296 (513)
Q Consensus 218 ~~~~~v~~~~~s~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 296 (513)
.+.....+++|+|+++ +++++..++.|.+|+..++ ...+..+...+.+++++++++++++...++.|.+||..+++.
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCE
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcE
Confidence 3455678999999998 7788888999999999877 566666778899999999999877777778999999988775
Q ss_pred eEEeecc----cCCeEEEEeeCCCeEEEEeC------------------CCcEEEEecCCCeeeEEecCCCCeeEEEeec
Q 010296 297 ISTLFGH----QSEVLTIDCLRKERVLTVGR------------------DRSMQLWKVPEESRLVFRAPASSLECCCFIS 354 (513)
Q Consensus 297 ~~~~~~~----~~~v~~~~~~~~~~~~~~~~------------------d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~ 354 (513)
....... ...+..+++.|+|.++++.. .+.|..++.. +..............++|+|
T Consensus 103 ~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~ 181 (296)
T 3e5z_A 103 ESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLP 181 (296)
T ss_dssp EEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECT
T ss_pred EEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECC
Confidence 4433221 23467899999998876421 3466666665 44445556666778999999
Q ss_pred CCe-EEEEeCCCCEEEEecC-CCCe---eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEE
Q 010296 355 NDE-FLSGSDDGSIELWSLL-RKKP---VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVT 429 (513)
Q Consensus 355 ~~~-~~~~~~dg~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 429 (513)
++. +++.+.++.|.+|++. +++. ...+ ... ...+..++
T Consensus 182 dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~------------------------------------~~~p~~i~ 224 (296)
T 3e5z_A 182 SGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVE------------------------------------PGKTDGLR 224 (296)
T ss_dssp TSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCS------------------------------------SSCCCSEE
T ss_pred CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCC------------------------------------CCCCCeEE
Confidence 996 5566678899999987 4443 1222 110 11256789
Q ss_pred EecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEe-ecCCCEEEEEecCCC
Q 010296 430 VCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAF-AKSGQFLIAGVGQEP 490 (513)
Q Consensus 430 ~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~-sp~~~~l~~~~~~dg 490 (513)
++++|+++++. ++.|.+|+.. + ..+..+.. +.. +++++| +|+++.|+++ +.++
T Consensus 225 ~d~~G~l~v~~--~~~v~~~~~~-g-~~~~~~~~--~~~-~~~~~f~~~d~~~L~v~-t~~~ 278 (296)
T 3e5z_A 225 VDAGGLIWASA--GDGVHVLTPD-G-DELGRVLT--PQT-TSNLCFGGPEGRTLYMT-VSTE 278 (296)
T ss_dssp EBTTSCEEEEE--TTEEEEECTT-S-CEEEEEEC--SSC-CCEEEEESTTSCEEEEE-ETTE
T ss_pred ECCCCCEEEEc--CCeEEEECCC-C-CEEEEEEC--CCC-ceeEEEECCCCCEEEEE-cCCe
Confidence 99999877766 7889999986 3 33333332 334 889999 5899988888 4453
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.72 E-value=4.3e-16 Score=160.28 Aligned_cols=240 Identities=13% Similarity=0.043 Sum_probs=165.2
Q ss_pred ccCCCeEEEEECCCCCeEE-----EEeCCceEEEEeCCCCccc-cccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC
Q 010296 157 KHRQSVTAVALSEDDSKGF-----SASKDGSILHWDVSSGKGV-KYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS 230 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~-----t~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 230 (513)
+|...+.+++|||||++|| .|+.+.+|++||+.+++.+ ... .... ....++|+|
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~------------------~~~~--~~~~~~wsp 177 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDV------------------IEGG--KYATPKWTP 177 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCC------------------BSCC--TTCCCEECT
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcc------------------cCcc--cccceEEec
Confidence 5666899999999999999 3344578999999998754 110 0011 125789999
Q ss_pred CCCEEEEEeCCCc-------------EEEEeCCCcc----eeeeccCcCCCeEEEEEecCCCeEEEEeCCC----cEEEE
Q 010296 231 DGRYLASGGLDRH-------------IHLWDTRIQE----HIQAFPGHRGPVSCLTFRQGTSELFSGSFDR----TVKIW 289 (513)
Q Consensus 231 ~~~~l~s~~~dg~-------------i~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iw 289 (513)
+|+.|+.++.+.. |++|++.++. ++.....|...+.++.|+|+|++|+.++.++ .|++|
T Consensus 178 Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~ 257 (695)
T 2bkl_A 178 DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWK 257 (695)
T ss_dssp TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEE
T ss_pred CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEE
Confidence 9999999988776 9999998876 3444444667889999999999998877666 67888
Q ss_pred eCCCCceeEEeecccCCeEEEEeeCCCeEEEEeC----CCcEEEEecCCCee---eEEecC--CCCeeEEEeecCCeEEE
Q 010296 290 NAEDRAYISTLFGHQSEVLTIDCLRKERVLTVGR----DRSMQLWKVPEESR---LVFRAP--ASSLECCCFISNDEFLS 360 (513)
Q Consensus 290 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----d~~i~iwd~~~~~~---~~~~~~--~~~v~~~~~~~~~~~~~ 360 (513)
+..++. ...+..+...+....++.++ ++..+. ++.|.+|++.++.. ..+..+ ...+..++++.+..+++
T Consensus 258 ~~~~~~-~~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~ 335 (695)
T 2bkl_A 258 RPGEKD-FRLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLE 335 (695)
T ss_dssp CTTCSS-CEEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEE
T ss_pred cCCCCc-eEEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEE
Confidence 766554 34444455566666664444 555443 57899999977642 333333 44577788883334668
Q ss_pred EeCCCCEEEEecC-CCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEE
Q 010296 361 GSDDGSIELWSLL-RKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAAS 439 (513)
Q Consensus 361 ~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 439 (513)
...++..+||.+. .++....+... ....+..++++|+++.|+.
T Consensus 336 ~~~dg~~~l~~~~~~g~~~~~l~~~------------------------------------~~~~v~~~~~s~d~~~l~~ 379 (695)
T 2bkl_A 336 YLKDATSEVRVATLKGKPVRTVQLP------------------------------------GVGAASNLMGLEDLDDAYY 379 (695)
T ss_dssp EEETTEEEEEEEETTCCEEEECCCS------------------------------------SSSEECCCBSCTTCSEEEE
T ss_pred EEECCEEEEEEEeCCCCeeEEecCC------------------------------------CCeEEEEeecCCCCCEEEE
Confidence 8889988888664 34444443211 1233777888898877663
Q ss_pred e----cCCCcEEEEEeCCC
Q 010296 440 G----AGNGSVRLWAIESE 454 (513)
Q Consensus 440 g----~~dg~v~vwd~~~~ 454 (513)
. ...+.|++||+.++
T Consensus 380 ~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 380 VFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp EEEETTEEEEEEEEETTTC
T ss_pred EEcCCCCCCEEEEEECCCC
Confidence 3 34578999999876
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.71 E-value=5.7e-15 Score=133.30 Aligned_cols=237 Identities=9% Similarity=-0.006 Sum_probs=166.1
Q ss_pred CeEEEEECCCCCeEE-EEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEe
Q 010296 161 SVTAVALSEDDSKGF-SASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGG 239 (513)
Q Consensus 161 ~V~~~~~s~~~~~l~-t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 239 (513)
...+|++++++++++ +.+.++.|.+|+..+...... ...+...+.+|+++++++++++..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~-------------------~~~~~~~p~~i~~~~~g~l~v~~~ 85 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL-------------------PFNGLYQPQGLAVDGAGTVYVTDF 85 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC-------------------CCCSCCSCCCEEECTTCCEEEEET
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceE-------------------eeCCcCCcceeEECCCCCEEEEcC
Confidence 778999999999776 446789999999765443211 012234577899999998666655
Q ss_pred CCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeCCCeEE
Q 010296 240 LDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRKERVL 319 (513)
Q Consensus 240 ~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 319 (513)
++.|.+|+................+.+++++++++++++...++.|.+|+..+.............+..+++.+++.++
T Consensus 86 -~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~ 164 (270)
T 1rwi_B 86 -NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVY 164 (270)
T ss_dssp -TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEE
T ss_pred -CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEE
Confidence 8899999987654432222233578999999999877777778899999876654433222333467889999988777
Q ss_pred EEe-CCCcEEEEecCCCeeeEEe-cCCCCeeEEEeecCCeEE-EEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCccc
Q 010296 320 TVG-RDRSMQLWKVPEESRLVFR-APASSLECCCFISNDEFL-SGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQ 396 (513)
Q Consensus 320 ~~~-~d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (513)
++. .++.|.+|+.......... .....+..+++.++|.++ +...++.|.+|+........ ..
T Consensus 165 v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~-------------- 229 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LP-------------- 229 (270)
T ss_dssp EEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CC--------------
T ss_pred EEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-ec--------------
Confidence 655 4689999998876654332 233668899999998755 44567899999986643322 11
Q ss_pred CcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 397 DEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 397 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
..+...+.+++++++|+++++...++.|++|++...
T Consensus 230 ----------------------~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 230 ----------------------FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp ----------------------CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred ----------------------cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 011123889999999999899999999999998765
No 189
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.71 E-value=4.9e-15 Score=137.28 Aligned_cols=282 Identities=11% Similarity=0.017 Sum_probs=190.0
Q ss_pred EEECCCCCeEEEEeC-----CceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEe
Q 010296 165 VALSEDDSKGFSASK-----DGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGG 239 (513)
Q Consensus 165 ~~~s~~~~~l~t~~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 239 (513)
....|+++.+++... ++.|.+.|..+++.+..+ .....+ . ++++|+|++|++++
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I-------------------~vG~~P-~-va~spDG~~lyVan 96 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMI-------------------DGGFLP-N-PVVADDGSFIAHAS 96 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEE-------------------EECSSC-E-EEECTTSSCEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEE-------------------ECCCCC-c-EEECCCCCEEEEEc
Confidence 455789988888765 689999999999988765 111223 4 99999999888775
Q ss_pred ----------CCCcEEEEeCCCcceeeeccCc-------CCCeEEEEEecCCCeEEEEeC--CCcEEEEeCCCCceeEEe
Q 010296 240 ----------LDRHIHLWDTRIQEHIQAFPGH-------RGPVSCLTFRQGTSELFSGSF--DRTVKIWNAEDRAYISTL 300 (513)
Q Consensus 240 ----------~dg~i~vwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~ 300 (513)
.++.|.+||..+++.+..+... ......+.|+|+|++|+++.. ++.|.++|+.+++.+.++
T Consensus 97 ~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 97 TVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp EEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred ccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 3578999999999988876432 124567999999999998864 689999999999998887
Q ss_pred ecccCCeEEEEeeC-CCeEEEEeCCCcEEEEecCC-CeeeEEe-cCC----CCee-EEEee-cCCeEEEEeCCCCEEEEe
Q 010296 301 FGHQSEVLTIDCLR-KERVLTVGRDRSMQLWKVPE-ESRLVFR-APA----SSLE-CCCFI-SNDEFLSGSDDGSIELWS 371 (513)
Q Consensus 301 ~~~~~~v~~~~~~~-~~~~~~~~~d~~i~iwd~~~-~~~~~~~-~~~----~~v~-~~~~~-~~~~~~~~~~dg~i~iwd 371 (513)
.... . ...+.. ...+++.+.||.+.+.++.. ++..... ... .++. ...|. ++|+++..+.+|.|++.|
T Consensus 177 ~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d 253 (386)
T 3sjl_D 177 DVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQID 253 (386)
T ss_dssp ECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEE
T ss_pred ECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEE
Confidence 5321 1 122222 33677888899999998876 4432111 111 1111 13443 678776677789999999
Q ss_pred cCCCCe--eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecC-------
Q 010296 372 LLRKKP--VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAG------- 442 (513)
Q Consensus 372 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~------- 442 (513)
+.+... +..+...... .+.. .........++++++++.|+....
T Consensus 254 ~~~~~~~v~~~~~~~~~~------------~~~~---------------g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~h 306 (386)
T 3sjl_D 254 LSSGDAKFLPAVEALTEA------------ERAD---------------GWRPGGWQQVAYHRALDRIYLLVDQRDEWRH 306 (386)
T ss_dssp CTTSSCEECCCEESSCHH------------HHHT---------------TEEECSSSCEEEETTTTEEEEEEEECCTTCT
T ss_pred CCCCcceeecceeccccc------------cccc---------------cccCCCcceeeECCCCCeEEEEecccccccc
Confidence 876643 2222100000 0000 000111445777999988887643
Q ss_pred ---CCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCC-EEEEEecCCCcccccccCCCc
Q 010296 443 ---NGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQ-FLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 443 ---dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~-~l~~~~~~dg~v~~W~~~~~~ 501 (513)
.+.|.++|+.+. +.+..++....+.+|+|+||++ +|+++...++.|.++|..++.
T Consensus 307 k~~~~~V~viD~~t~----kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 307 KTASRFVVVLDAKTG----ERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp TSCEEEEEEEETTTC----CEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCCEEEEEECCCC----eEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 257999999887 3333333456789999999997 778876779999999987664
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.71 E-value=7.2e-15 Score=132.35 Aligned_cols=249 Identities=12% Similarity=0.019 Sum_probs=175.0
Q ss_pred CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCc-ccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 010296 170 DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQS-KHILALAVSSDGRYLASGGLDRHIHLWD 248 (513)
Q Consensus 170 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~i~vwd 248 (513)
.+++|++++.++.|.+||..+++.+..+ ..+. ..+.+++++|+|++|+ +.++.|..||
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~-------------------~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d 62 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEY-------------------PLEKGWECNSVAATKAGEILF--SYSKGAKMIT 62 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEE-------------------ECCTTCCCCEEEECTTSCEEE--ECBSEEEEEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEe-------------------CCCccCCCcCeEECCCCCEEE--eCCCCEEEEC
Confidence 3578999999999999999999988765 1222 3578899999999888 3478899999
Q ss_pred CCCcceeeeccCcC-CCeEEEEEecCCCeEEEEeC-CCcEEEEeCCCCceeEEeec------ccCCeEEEEeeCCCeEE-
Q 010296 249 TRIQEHIQAFPGHR-GPVSCLTFRQGTSELFSGSF-DRTVKIWNAEDRAYISTLFG------HQSEVLTIDCLRKERVL- 319 (513)
Q Consensus 249 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~- 319 (513)
. +++.+..+..+. ..+.++.+.++|+++++.+. ++.|..++. +++.+..+.. +......+.+.+++.++
T Consensus 63 ~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv 140 (276)
T 3no2_A 63 R-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLV 140 (276)
T ss_dssp T-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEE
T ss_pred C-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEE
Confidence 8 899888887643 46889999999999998887 788888886 6777666541 22234556677777655
Q ss_pred EEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCc
Q 010296 320 TVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDE 398 (513)
Q Consensus 320 ~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (513)
+...++.|..||.. ++.+........+..+.+.+++. +++++.++.|..+|..+++.+..+......
T Consensus 141 ~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~----------- 208 (276)
T 3no2_A 141 PLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIE----------- 208 (276)
T ss_dssp EETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSB-----------
T ss_pred EecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCC-----------
Confidence 56678999999998 66553333334566677788886 556666778999999999999888632110
Q ss_pred CccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCC--------CcEEEEEeCCCCcceeeeeecCcccEE
Q 010296 399 GKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGN--------GSVRLWAIESETKDIQPLYNLPLVGFV 470 (513)
Q Consensus 399 ~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d--------g~v~vwd~~~~~~~~~~~~~~~~~~~v 470 (513)
......+..++..++|.++++.... +..+++.+....+.+-.+......+.|
T Consensus 209 --------------------~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~ 268 (276)
T 3no2_A 209 --------------------GVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMI 268 (276)
T ss_dssp --------------------SCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCTTTSCCC
T ss_pred --------------------CccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEecCcccccce
Confidence 0112338889999999988887421 245677774443333333333334444
Q ss_pred EEE
Q 010296 471 NSL 473 (513)
Q Consensus 471 ~~v 473 (513)
.+|
T Consensus 269 ~~~ 271 (276)
T 3no2_A 269 STI 271 (276)
T ss_dssp CEE
T ss_pred eee
Confidence 444
No 191
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=2e-15 Score=140.88 Aligned_cols=235 Identities=12% Similarity=0.088 Sum_probs=168.3
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEee
Q 010296 222 HILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLF 301 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 301 (513)
.|.+++|++++..++..+.++.++.| .+.....+..+...+.+++|++++++++++..++.|.+||..+++......
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~ 83 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV 83 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred ccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee
Confidence 36778899988877777778899999 455666677777788999999999977788889999999998887665444
Q ss_pred cccCCeEEEEeeCCCeEEEEeCC-----CcEEEEecCCCeeeEEe---cCCCCeeEEEeecCCeEEEEeCC-------CC
Q 010296 302 GHQSEVLTIDCLRKERVLTVGRD-----RSMQLWKVPEESRLVFR---APASSLECCCFISNDEFLSGSDD-------GS 366 (513)
Q Consensus 302 ~~~~~v~~~~~~~~~~~~~~~~d-----~~i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~d-------g~ 366 (513)
.+...+.++++++++.++++... +.|.+|+..+.....+. .....+..++++|++.++.++.. +.
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~ 163 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGG 163 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEE
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCce
Confidence 56678999999999987766644 48999998877654222 23456889999999986655542 45
Q ss_pred EEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEE-EEecCCCc
Q 010296 367 IELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLA-ASGAGNGS 445 (513)
Q Consensus 367 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~g~~dg~ 445 (513)
|..|+..+++........ ..+..++|+|++++| ++.+.++.
T Consensus 164 l~~~~~~~~~~~~~~~~~--------------------------------------~~~~~i~~~~dg~~l~v~~~~~~~ 205 (333)
T 2dg1_A 164 VYYVSPDFRTVTPIIQNI--------------------------------------SVANGIALSTDEKVLWVTETTANR 205 (333)
T ss_dssp EEEECTTSCCEEEEEEEE--------------------------------------SSEEEEEECTTSSEEEEEEGGGTE
T ss_pred EEEEeCCCCEEEEeecCC--------------------------------------CcccceEECCCCCEEEEEeCCCCe
Confidence 666665554433222110 117889999999855 45556789
Q ss_pred EEEEEeCCCCcceeee-----eecCcccEEEEEEeecCCCEEEEEecCCCcccccccC
Q 010296 446 VRLWAIESETKDIQPL-----YNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHL 498 (513)
Q Consensus 446 v~vwd~~~~~~~~~~~-----~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~ 498 (513)
|++|++......+..+ ........+..++++++|.++++. ..++.|.+|+..
T Consensus 206 i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~-~~~~~v~~~d~~ 262 (333)
T 2dg1_A 206 LHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAM-YGQGRVLVFNKR 262 (333)
T ss_dssp EEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEE-ETTTEEEEECTT
T ss_pred EEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEE-cCCCEEEEECCC
Confidence 9999997432222211 111112468889999999977766 667899999873
No 192
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.70 E-value=9.4e-14 Score=130.66 Aligned_cols=280 Identities=10% Similarity=-0.047 Sum_probs=182.1
Q ss_pred EECCCCCeEEEEeC--Cc---eEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEe-
Q 010296 166 ALSEDDSKGFSASK--DG---SILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGG- 239 (513)
Q Consensus 166 ~~s~~~~~l~t~~~--dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~- 239 (513)
...|++++++++.. .. +|.+||..+++.+..+ .....+ .++|+|+|++|+++.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i-------------------~~g~~p--~i~~spDg~~lyv~n~ 85 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHV-------------------NGGFLP--NPVAAHSGSEFALAST 85 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEe-------------------cCCCCC--CeEECCCCCEEEEEec
Confidence 44577887777653 22 8899999998876554 111222 899999999999886
Q ss_pred ---------CCCcEEEEeCCCcceeeeccCc-------CCCeEEEEEecCCCeEEEEeC--CCcEEEEeCCCCceeEE-e
Q 010296 240 ---------LDRHIHLWDTRIQEHIQAFPGH-------RGPVSCLTFRQGTSELFSGSF--DRTVKIWNAEDRAYIST-L 300 (513)
Q Consensus 240 ---------~dg~i~vwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~ 300 (513)
.++.|.+||..+.+.+..+... ......+.|+|+|++|+++.. ++.|.++| .+++.+.. +
T Consensus 86 ~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i 164 (373)
T 2mad_H 86 SFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLL 164 (373)
T ss_pred cccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEc
Confidence 3678999999988887765432 123458999999999998874 57899999 99988777 5
Q ss_pred ecccCCeEEEEeeCCC--eEEEEeCCCcEEEEecCCCeeeEEe------cCCCCe-eEEEeecCC-eEEEEeCCCCEEEE
Q 010296 301 FGHQSEVLTIDCLRKE--RVLTVGRDRSMQLWKVPEESRLVFR------APASSL-ECCCFISND-EFLSGSDDGSIELW 370 (513)
Q Consensus 301 ~~~~~~v~~~~~~~~~--~~~~~~~d~~i~iwd~~~~~~~~~~------~~~~~v-~~~~~~~~~-~~~~~~~dg~i~iw 370 (513)
.. .. ++.+.|.+ .+++.+.||.+.+++. ++...... ....++ ....+.+++ .++..+..+.+.+.
T Consensus 165 ~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vi 239 (373)
T 2mad_H 165 SS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQA 239 (373)
T ss_pred CC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEE
Confidence 42 22 23444443 5667778999999999 66554211 111111 223344443 44444477899999
Q ss_pred ecCCCCe--eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecC------
Q 010296 371 SLLRKKP--VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAG------ 442 (513)
Q Consensus 371 d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~------ 442 (513)
|+.+... +..+....... .. ..........++++|+++.|+++..
T Consensus 240 d~~~~~~~v~~~~~~~~~~~-----------------------~~----~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~ 292 (373)
T 2mad_H 240 DISAAGATNKAPIDALSGGR-----------------------KA----DTWRPGGWQQVAYLKSSDGIYLLTSEQSAWK 292 (373)
T ss_pred eccCCcceEeeeeeecCCcc-----------------------cc----cceecCceEeEEECCCCCEEEEEeccCCccc
Confidence 9876532 22221100000 00 0001112455789999988887643
Q ss_pred ----CCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCC-EEEEEecCCCcccccccCCCccc
Q 010296 443 ----NGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQ-FLIAGVGQEPRLGRWGHLPAARN 503 (513)
Q Consensus 443 ----dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~-~l~~~~~~dg~v~~W~~~~~~~~ 503 (513)
.+.|.++|+.+. +.+. .++......+++|+|||+ +|+++...++.|.+||..+....
T Consensus 293 ~~~~~~~V~VID~~t~-~vv~---~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 293 LHAAAKEVTSVTGLVG-QTSS---QISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred ccCCCCeEEEEECCCC-EEEE---EEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 357999999887 3333 333445689999999999 67776446899999998776543
No 193
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.69 E-value=3.4e-13 Score=123.58 Aligned_cols=274 Identities=13% Similarity=0.037 Sum_probs=189.0
Q ss_pred cCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEE
Q 010296 158 HRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLAS 237 (513)
Q Consensus 158 h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 237 (513)
....+.+|++.++|+++++...++.|.+|+.. +...... ...+...+.++++.+++.++++
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~------------------~~~~~~~~~~i~~~~~g~l~v~ 78 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFE------------------VPTPDAKVMCLIVSSLGDIWFT 78 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE------------------CSSTTCCEEEEEECTTSCEEEE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEE------------------CCCCCCcceeEEECCCCCEEEE
Confidence 45678999999999988877778999999987 4433211 1122356899999999988777
Q ss_pred EeCCCcEEEEeCCCccee-eeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEE-eecccCCeEEEEeeCC
Q 010296 238 GGLDRHIHLWDTRIQEHI-QAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYIST-LFGHQSEVLTIDCLRK 315 (513)
Q Consensus 238 ~~~dg~i~vwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~ 315 (513)
...++.|.+||.. ++.. ..+......+.++++.+++.++++...++.|..|+.. ++.... +......+..+++.++
T Consensus 79 ~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 79 ENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD 156 (300)
T ss_dssp ETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT
T ss_pred ecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCC
Confidence 7667889999987 5543 2233344678999999999877777778899999987 554422 2323457889999998
Q ss_pred CeEEEEeC-CCcEEEEecCCCeeeEEe--cCCCCeeEEEeecCCeEEEEe-CCCCEEEEecCCCCeeEEeecCCCcccCC
Q 010296 316 ERVLTVGR-DRSMQLWKVPEESRLVFR--APASSLECCCFISNDEFLSGS-DDGSIELWSLLRKKPVYIVKNAHPLLDGL 391 (513)
Q Consensus 316 ~~~~~~~~-d~~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 391 (513)
+.++.+.. .+.|..|+. .+....+. .....+..+++.+++.+..+. ..+.|.+|+. +++.......
T Consensus 157 g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~-------- 226 (300)
T 2qc5_A 157 NALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIP-------- 226 (300)
T ss_dssp SSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECS--------
T ss_pred CCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECC--------
Confidence 88776654 678999998 44443332 234567889999988766554 4567999997 4443332110
Q ss_pred CCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEE
Q 010296 392 KNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVN 471 (513)
Q Consensus 392 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~ 471 (513)
.....+.+++++++|+++++...++.|..|+.. + .+..+........+.
T Consensus 227 ----------------------------~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g--~~~~~~~~~~~~~~~ 275 (300)
T 2qc5_A 227 ----------------------------TPNARPHAITAGKNSEIWFTEWGANQIGRITND-N--TIQEYQLQTENAEPH 275 (300)
T ss_dssp ----------------------------STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-S--CEEEEECCSTTCCCC
T ss_pred ----------------------------CCCCCceEEEECCCCCEEEeccCCCeEEEECCC-C--cEEEEECCccCCccc
Confidence 011228899999999977777777899999983 3 222222111345578
Q ss_pred EEEeecCCCEEEEEecCCCcccccc
Q 010296 472 SLAFAKSGQFLIAGVGQEPRLGRWG 496 (513)
Q Consensus 472 ~v~~sp~~~~l~~~~~~dg~v~~W~ 496 (513)
+++++++|.++++. . . .|..++
T Consensus 276 ~i~~~~~g~l~v~~-~-~-~i~~~~ 297 (300)
T 2qc5_A 276 GITFGKDGSVWFAL-K-C-KIGKLN 297 (300)
T ss_dssp CEEECTTSCEEEEC-S-S-EEEEEE
T ss_pred eeEeCCCCCEEEEc-c-C-ceEEeC
Confidence 89999999866655 3 3 554444
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=5.8e-15 Score=138.61 Aligned_cols=221 Identities=15% Similarity=0.180 Sum_probs=150.4
Q ss_pred CCeEEEEECCCCCeEEEEeCC---c--eEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCE
Q 010296 160 QSVTAVALSEDDSKGFSASKD---G--SILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRY 234 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~t~~~d---g--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 234 (513)
..+.+++|+|||++|+.++.+ + .|.+|++.+++..... .+.. +..++|+|+|+.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~--------------------~~~~-~~~~~wspdg~~ 117 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKIL--------------------EAKN-IRSLEWNEDSRK 117 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEE--------------------EESE-EEEEEECTTSSE
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEE--------------------cCCC-ccceeECCCCCE
Confidence 568899999999999977653 3 4888888877654321 2233 899999999999
Q ss_pred EEEEeCC---------------------------CcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCC---
Q 010296 235 LASGGLD---------------------------RHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDR--- 284 (513)
Q Consensus 235 l~s~~~d---------------------------g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--- 284 (513)
|+.++.+ ..|++|++.+++.+..+.. . .+..+.|+|++ +++++..++
T Consensus 118 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~ 194 (347)
T 2gop_A 118 LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIP 194 (347)
T ss_dssp EEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSC
T ss_pred EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccc
Confidence 8887632 5799999998877455554 3 78899999999 777776542
Q ss_pred ----cEEEEeCCCCceeEEeecccCCeEEEEeeCCCe-EEEEeCC--------CcEEEEecCCCeeeEEe-cCCCCeeE-
Q 010296 285 ----TVKIWNAEDRAYISTLFGHQSEVLTIDCLRKER-VLTVGRD--------RSMQLWKVPEESRLVFR-APASSLEC- 349 (513)
Q Consensus 285 ----~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d--------~~i~iwd~~~~~~~~~~-~~~~~v~~- 349 (513)
...||.+.+++ ...+..+ ..+..+ +|+|. ++.++.+ ..|.+|+ ++....+. .+...+..
T Consensus 195 ~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~ 268 (347)
T 2gop_A 195 QYFKFWDIYIWEDGK-EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQA 268 (347)
T ss_dssp CSSCCEEEEEEETTE-EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEE
T ss_pred cccccccEEEeCCCc-eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCc
Confidence 33444443444 3344434 555544 88884 5555533 4688888 44443333 33456765
Q ss_pred EEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEE
Q 010296 350 CCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVT 429 (513)
Q Consensus 350 ~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 429 (513)
+.|+ ++.+++++.++.++|| +.+++....+.. ...|.+++
T Consensus 269 ~~~s-dg~~~~~~~~~~~~l~-~~~g~~~~~~~~--------------------------------------~~~v~~~~ 308 (347)
T 2gop_A 269 KIKD-GKVYFTLFEEGSVNLY-IWDGEIKPIAKG--------------------------------------RHWIMGFD 308 (347)
T ss_dssp EEET-TEEEEEEEETTEEEEE-EESSSEEEEECS--------------------------------------SSEEEEEE
T ss_pred cEEc-CcEEEEEecCCcEEEE-EcCCceEEEecC--------------------------------------CCeEEeee
Confidence 8888 7766688889999999 876554333221 23389999
Q ss_pred EecCCCEEEEecCCCcE-EEEEeC
Q 010296 430 VCGGSDLAASGAGNGSV-RLWAIE 452 (513)
Q Consensus 430 ~s~~~~~l~~g~~dg~v-~vwd~~ 452 (513)
|+| .++++++.++.. .||.+.
T Consensus 309 ~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 309 VDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp ESS--SEEEEEECSSSCCEEEEES
T ss_pred eeC--cEEEEEcCCCChHHheEeC
Confidence 999 677777777665 788776
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=1.5e-14 Score=130.60 Aligned_cols=238 Identities=10% Similarity=0.006 Sum_probs=163.1
Q ss_pred cEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEe
Q 010296 222 HILALAVSSDGRYLA-SGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTL 300 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 300 (513)
...++++++++++++ +...++.|.+|+..+.........+...+.+++++++++++++.. ++.|.+|+..+.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 688999999999777 446788999999766543332223445678999999988655555 889999998765443222
Q ss_pred ecccCCeEEEEeeCCCeEEEEe-CCCcEEEEecCCCeeeEEe-cCCCCeeEEEeecCCeEE-EEeCCCCEEEEecCCCCe
Q 010296 301 FGHQSEVLTIDCLRKERVLTVG-RDRSMQLWKVPEESRLVFR-APASSLECCCFISNDEFL-SGSDDGSIELWSLLRKKP 377 (513)
Q Consensus 301 ~~~~~~v~~~~~~~~~~~~~~~-~d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~~~~dg~i~iwd~~~~~~ 377 (513)
......+..+++.+++.++++. .++.|.+|+..+....... .....+..+++.+++.++ +...++.|.+|+......
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ 183 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce
Confidence 2233568899999988777654 5788999976554433222 223467789999988755 445678999999876653
Q ss_pred eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcc
Q 010296 378 VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKD 457 (513)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~ 457 (513)
..... .....+..++++++|.++++...++.|.+|+......
T Consensus 184 ~~~~~-------------------------------------~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~- 225 (270)
T 1rwi_B 184 VVLPF-------------------------------------TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS- 225 (270)
T ss_dssp EECCC-------------------------------------SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC-
T ss_pred Eeecc-------------------------------------cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc-
Confidence 32111 0012288999999998888888888999999866421
Q ss_pred eeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCc
Q 010296 458 IQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 458 ~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
.. ....+...+.+++++|+|+++++. ..+++|++++.....
T Consensus 226 -~~-~~~~~~~~p~~i~~~~~g~l~v~~-~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 226 -TV-LPFTGLNTPLAVAVDSDRTVYVAD-RGNDRVVKLTSLEHH 266 (270)
T ss_dssp -EE-CCCCSCSCEEEEEECTTCCEEEEE-GGGTEEEEECCCGGG
T ss_pred -ee-eccCCCCCceeEEECCCCCEEEEE-CCCCEEEEEcCCCcc
Confidence 11 111233568999999999866665 788999999876543
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.66 E-value=8.1e-14 Score=129.37 Aligned_cols=232 Identities=9% Similarity=-0.001 Sum_probs=163.1
Q ss_pred CCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEe
Q 010296 160 QSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGG 239 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 239 (513)
.....+.+. +++++++...++.|.+||..+++.+..+ ........++++++++++++..
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i--------------------~~~~~p~~i~~~~~g~lyv~~~ 102 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRI--------------------TGFTSPRYIHFLSDEKAYVTQI 102 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEE--------------------ECCSSEEEEEEEETTEEEEEEB
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEc--------------------CCCCCCcEEEEeCCCeEEEEEC
Confidence 346778774 3445556666799999999999887654 1234588999999985555554
Q ss_pred CCCcEEEEeCCCcceeeeccCcC-----CCeEEEEEecCCCeEEEEe--CCCcEEEEeCCCCceeEEeecccCCeEEEEe
Q 010296 240 LDRHIHLWDTRIQEHIQAFPGHR-----GPVSCLTFRQGTSELFSGS--FDRTVKIWNAEDRAYISTLFGHQSEVLTIDC 312 (513)
Q Consensus 240 ~dg~i~vwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 312 (513)
.++.|.+||+.+++....+.... .....|++ . +..|+++. .++.|.+||+.+++.+..+.. ......+.+
T Consensus 103 ~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~ 179 (328)
T 3dsm_A 103 WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVM 179 (328)
T ss_dssp SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEE
T ss_pred CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEE
Confidence 78999999999998877665332 14456777 3 45555554 488999999999988877754 344578889
Q ss_pred eCCCeEEEEeCC-----------CcEEEEecCCCeeeEE-ecC-CCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCee
Q 010296 313 LRKERVLTVGRD-----------RSMQLWKVPEESRLVF-RAP-ASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPV 378 (513)
Q Consensus 313 ~~~~~~~~~~~d-----------~~i~iwd~~~~~~~~~-~~~-~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~ 378 (513)
.+++++++++.. +.|.+||..+.+.... ..+ ......++++|++. ++++.. .|.+||..+++..
T Consensus 180 ~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 180 DKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVP 257 (328)
T ss_dssp CTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCC
T ss_pred cCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCcee
Confidence 999988766653 6899999988876532 222 34688999999775 444433 8999999887643
Q ss_pred EEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEec-CCCEEEEe----cCCCcEEEEEeC
Q 010296 379 YIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCG-GSDLAASG----AGNGSVRLWAIE 452 (513)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~g----~~dg~v~vwd~~ 452 (513)
..... .........++++| ++.++++. ..++.|.+|+..
T Consensus 258 ~~~~~-----------------------------------~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 258 VRPFL-----------------------------------EFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SSCSB-----------------------------------CCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred eeeee-----------------------------------cCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 10000 00012388999999 56666666 578899999987
No 197
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.65 E-value=2e-14 Score=133.14 Aligned_cols=275 Identities=9% Similarity=0.019 Sum_probs=179.9
Q ss_pred CCCcccchhhhhccCCCeEEEEECCCCCeEEEEe----------CCceEEEEeCCCCccccccCCChhhhccCCCCCCCC
Q 010296 145 KPEATDEFRVLLKHRQSVTAVALSEDDSKGFSAS----------KDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQG 214 (513)
Q Consensus 145 ~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (513)
+....+.+..+..-..+ .++++|+|++|++++ .++.|.+||..+.+.+..+.-.. +
T Consensus 65 D~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~------g------ 130 (386)
T 3sjl_D 65 DGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPD------A------ 130 (386)
T ss_dssp ETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETT------C------
T ss_pred ECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCC------c------
Confidence 33444445555544444 499999999998775 36789999999998877551000 0
Q ss_pred CCCCCcccEEEEEEcCCCCEEEEEeC--CCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCC
Q 010296 215 RATKQSKHILALAVSSDGRYLASGGL--DRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAE 292 (513)
Q Consensus 215 ~~~~~~~~v~~~~~s~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 292 (513)
...........++|+|+|++|+++.. ++.|.++|+.+++.+.++.... + ...+....+.+++.+.||.+.+.++.
T Consensus 131 ~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~ 207 (386)
T 3sjl_D 131 PRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFG 207 (386)
T ss_dssp CCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECC
T ss_pred cccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECC
Confidence 00000123456899999999998874 6899999999999998885322 1 23333345667788889999999987
Q ss_pred C-CceeEEeecc----cCCeE-EEEee-CCCeEEEEeCCCcEEEEecCCCeeeE---Ee--c--------CCCCeeEEEe
Q 010296 293 D-RAYISTLFGH----QSEVL-TIDCL-RKERVLTVGRDRSMQLWKVPEESRLV---FR--A--------PASSLECCCF 352 (513)
Q Consensus 293 ~-~~~~~~~~~~----~~~v~-~~~~~-~~~~~~~~~~d~~i~iwd~~~~~~~~---~~--~--------~~~~v~~~~~ 352 (513)
+ ++.......+ ..++. ...|. ++++++..+.++.|++.|+.+..... .. . .......+++
T Consensus 208 ~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~ 287 (386)
T 3sjl_D 208 TEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAY 287 (386)
T ss_dssp SSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEE
T ss_pred CCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeE
Confidence 6 5543221111 12221 23453 67888778889999999997654321 11 0 1123345677
Q ss_pred ecCCe-EEEEeC----------CCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCC
Q 010296 353 ISNDE-FLSGSD----------DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSA 421 (513)
Q Consensus 353 ~~~~~-~~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 421 (513)
++++. +++... .+.|.++|+.+++.+..+.....
T Consensus 288 ~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~----------------------------------- 332 (386)
T 3sjl_D 288 HRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE----------------------------------- 332 (386)
T ss_dssp ETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE-----------------------------------
T ss_pred CCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCC-----------------------------------
Confidence 87764 333221 25799999999999999875432
Q ss_pred cceEEEEEEecCCC-EEEEe-cCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecC
Q 010296 422 YSWVSSVTVCGGSD-LAASG-AGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKS 478 (513)
Q Consensus 422 ~~~i~~~~~s~~~~-~l~~g-~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~ 478 (513)
+..|+++++++ +|+++ ..++.|.++|..++ +.+..+. ..+..+.+.+++|
T Consensus 333 ---~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~-k~~~~i~---~~~~p~~l~~s~d 384 (386)
T 3sjl_D 333 ---IDSINVSQDEKPLLYALSTGDKTLYIHDAESG-EELRSVN---QLGHGPQVITTAD 384 (386)
T ss_dssp ---ECEEEECSSSSCEEEEEETTTTEEEEEETTTC-CEEEEEC---CCCSSCCEEEECC
T ss_pred ---cceEEECCCCCeEEEEEcCCCCeEEEEECCCC-cEEEEec---CCCCCceeEECCc
Confidence 88999999997 66665 45899999999987 3344333 3444555677766
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.63 E-value=5.2e-14 Score=145.81 Aligned_cols=242 Identities=14% Similarity=0.047 Sum_probs=158.3
Q ss_pred CcccEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCc--------
Q 010296 219 QSKHILALAVSSDGRYLASGGLD-----RHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRT-------- 285 (513)
Q Consensus 219 ~~~~v~~~~~s~~~~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-------- 285 (513)
|...+..++|||||++||.++.+ ..|++||+.+++.+... .+...+..++|+|+ +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 44578899999999999887643 46999999999876431 12222357899999 98888876654
Q ss_pred ------EEEEeCCCCce--eEEee--cccCCeEEEEeeCCCeE-EEEeC-----CCcEEEEecCCC--e-eeEEecCCCC
Q 010296 286 ------VKIWNAEDRAY--ISTLF--GHQSEVLTIDCLRKERV-LTVGR-----DRSMQLWKVPEE--S-RLVFRAPASS 346 (513)
Q Consensus 286 ------i~iwd~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~-~~~~~-----d~~i~iwd~~~~--~-~~~~~~~~~~ 346 (513)
|++|++.++.. ...+. .+...+..+.|+|+|+. +..+. ...|++||+.++ . ...+..+...
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 89999987652 22222 23335889999999954 44443 348999999876 4 4445445444
Q ss_pred eeEEEeecCC-eEEEEeC----CCCEEEEecCCCC-eeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCC
Q 010296 347 LECCCFISND-EFLSGSD----DGSIELWSLLRKK-PVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSS 420 (513)
Q Consensus 347 v~~~~~~~~~-~~~~~~~----dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 420 (513)
.....+ |++ .|+..+. ++.|.+|++.++. ....+...+
T Consensus 319 ~~~~~~-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~----------------------------------- 362 (741)
T 1yr2_A 319 QWDFVD-GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES----------------------------------- 362 (741)
T ss_dssp CEEEEE-EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC-----------------------------------
T ss_pred eEEEEe-ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC-----------------------------------
Confidence 544444 555 5665554 3459999987752 223332111
Q ss_pred CcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEe---cCCCccccccc
Q 010296 421 AYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGV---GQEPRLGRWGH 497 (513)
Q Consensus 421 ~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~---~~dg~v~~W~~ 497 (513)
...+..++++ ++.++++...++..+||.+.........+. .+..+.|..++++|+++.|+.+. ...++|.+|++
T Consensus 363 -~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 363 -KDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVS-LPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp -SSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECB-CSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred -CCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeecc-CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 1226677887 567888888999888887763223333332 23467899999999988665332 34478999998
Q ss_pred CCCc
Q 010296 498 LPAA 501 (513)
Q Consensus 498 ~~~~ 501 (513)
.++.
T Consensus 440 ~tg~ 443 (741)
T 1yr2_A 440 ATAK 443 (741)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 6653
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.63 E-value=1.9e-13 Score=123.06 Aligned_cols=212 Identities=13% Similarity=0.071 Sum_probs=158.4
Q ss_pred CCCEEEEEeCCCcEEEEeCCCcceeeeccCcC-CCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeeccc-CCeE
Q 010296 231 DGRYLASGGLDRHIHLWDTRIQEHIQAFPGHR-GPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQ-SEVL 308 (513)
Q Consensus 231 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~ 308 (513)
.+++|++++.++.|.+||..+++.+..+..+. ..+.++.++|+|++|+ +.++.|..||. +++.+..+..+. ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 36789999999999999999999999998766 4789999999999888 45788999999 899988887643 4678
Q ss_pred EEEeeCCCeEEEE-eC-CCcEEEEecCCCeeeEEec------CCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeE
Q 010296 309 TIDCLRKERVLTV-GR-DRSMQLWKVPEESRLVFRA------PASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVY 379 (513)
Q Consensus 309 ~~~~~~~~~~~~~-~~-d~~i~iwd~~~~~~~~~~~------~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~ 379 (513)
++.+.+++.++.+ +. .+.|..++........+.. +......+.+.++|. +++...++.|.+||.. ++.+.
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w 159 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN 159 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE
Confidence 8889999876644 44 6778777764333223221 112344556778876 5677789999999988 99888
Q ss_pred EeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCccee
Q 010296 380 IVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQ 459 (513)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~ 459 (513)
.+.... .+.++.+.++|+++++++.++.|..+|..++. .+-
T Consensus 160 ~~~~~~--------------------------------------~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~-~~w 200 (276)
T 3no2_A 160 SVKLSG--------------------------------------TPFSSAFLDNGDCLVACGDAHCFVQLNLESNR-IVR 200 (276)
T ss_dssp EEECSS--------------------------------------CCCEEEECTTSCEEEECBTTSEEEEECTTTCC-EEE
T ss_pred EEECCC--------------------------------------CccceeEcCCCCEEEEeCCCCeEEEEeCcCCc-EEE
Confidence 876421 14567788999999999988899999988773 322
Q ss_pred eeeec--C--cccEEEEEEeecCCCEEEEE
Q 010296 460 PLYNL--P--LVGFVNSLAFAKSGQFLIAG 485 (513)
Q Consensus 460 ~~~~~--~--~~~~v~~v~~sp~~~~l~~~ 485 (513)
.+... + ....+..++..++|.++++.
T Consensus 201 ~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 201 RVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EecCCCCCCccccccccceEcCCCCEEEEe
Confidence 23211 1 12347889999999988877
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.63 E-value=5.1e-14 Score=145.90 Aligned_cols=241 Identities=13% Similarity=0.030 Sum_probs=158.9
Q ss_pred ccCCCeEEEEECCCCCeEEEEeCC-----ceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC
Q 010296 157 KHRQSVTAVALSEDDSKGFSASKD-----GSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD 231 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~t~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 231 (513)
+|...+..++|||||++||.++.+ .+|++||+.+++.+... .+...+..++|+|+
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~--------------------~~~~~~~~~~wspD 219 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE--------------------LKWVKFSGLAWLGN 219 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE--------------------EEEEESCCCEESTT
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc--------------------CCCceeccEEEECC
Confidence 344578899999999999976543 46999999998764311 11112357899999
Q ss_pred CCEEEEEeCCCc--------------EEEEeCCCcc----eeeeccCcCCCeEEEEEecCCCeEEEEeCCC-----cEEE
Q 010296 232 GRYLASGGLDRH--------------IHLWDTRIQE----HIQAFPGHRGPVSCLTFRQGTSELFSGSFDR-----TVKI 288 (513)
Q Consensus 232 ~~~l~s~~~dg~--------------i~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i 288 (513)
+.|+.++.++. |++|++.++. .+.....+...+..+.|+|+|++|+..+.++ .|++
T Consensus 220 -~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~ 298 (741)
T 1yr2_A 220 -DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHV 298 (741)
T ss_dssp -SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEE
T ss_pred -CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEE
Confidence 98888876654 8999997765 2323333444688999999999988776543 8999
Q ss_pred EeCCCC--ceeEEeecccCCeEEEEeeCCCeEEEEeC----CCcEEEEecCCC--eeeE-EecCCCCeeEEEeecCCeEE
Q 010296 289 WNAEDR--AYISTLFGHQSEVLTIDCLRKERVLTVGR----DRSMQLWKVPEE--SRLV-FRAPASSLECCCFISNDEFL 359 (513)
Q Consensus 289 wd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----d~~i~iwd~~~~--~~~~-~~~~~~~v~~~~~~~~~~~~ 359 (513)
||+.++ .+...+..+...+....+..++.++..+. .+.|.+|++.+. .... +..+...+..+.+..+..++
T Consensus 299 ~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~ 378 (741)
T 1yr2_A 299 ARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFA 378 (741)
T ss_dssp EEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEE
T ss_pred EECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEE
Confidence 999876 41445555555555554433446666654 345999998874 3333 33333445567777433466
Q ss_pred EEeCCCCEEEEecC-CCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEE
Q 010296 360 SGSDDGSIELWSLL-RKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAA 438 (513)
Q Consensus 360 ~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 438 (513)
+...++..+||.+. +++....+... ....+..++++|+++.|+
T Consensus 379 ~~~~dg~~~l~~~~~~g~~~~~l~~~------------------------------------~~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 379 SYIHDAKSQVLAFDLDGKPAGAVSLP------------------------------------GIGSASGLSGRPGDRHAY 422 (741)
T ss_dssp EEEETTEEEEEEEETTSCEEEECBCS------------------------------------SSCEEEEEECCBTCSCEE
T ss_pred EEEECCEEEEEEEeCCCCceeeccCC------------------------------------CCeEEEEeecCCCCCEEE
Confidence 88888887777654 34444444311 123388899999987665
Q ss_pred Ee----cCCCcEEEEEeCCC
Q 010296 439 SG----AGNGSVRLWAIESE 454 (513)
Q Consensus 439 ~g----~~dg~v~vwd~~~~ 454 (513)
.. ...++|++||+.++
T Consensus 423 ~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 423 LSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EEEEETTEEEEEEEEETTTT
T ss_pred EEEcCCCCCCEEEEEECCCC
Confidence 32 34578999999876
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.63 E-value=2.7e-13 Score=125.16 Aligned_cols=238 Identities=6% Similarity=0.024 Sum_probs=162.1
Q ss_pred cEEEEEEcCCCCEEEE-------EeCCCcEEEEeCCCcceeeecc----CcCCCeEEEEEecC-CCeEEEEeCCCcEEEE
Q 010296 222 HILALAVSSDGRYLAS-------GGLDRHIHLWDTRIQEHIQAFP----GHRGPVSCLTFRQG-TSELFSGSFDRTVKIW 289 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s-------~~~dg~i~vwd~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw 289 (513)
...+++|++++.++++ +..++.|.+|+..+++...... ++...+.+++++++ ++ |+.++..+.|.+|
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~~~l~~~ 97 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMRLGLLVV 97 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEETTTEEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEECCCCEEEE
Confidence 4678999999988777 5668899999988777543222 25567899999999 65 4444445579999
Q ss_pred eCCCCceeEE-eec----ccCCeEEEEeeCCCeEEEEeCC----------------CcEEEEecCCCeeeEEecCCCCee
Q 010296 290 NAEDRAYIST-LFG----HQSEVLTIDCLRKERVLTVGRD----------------RSMQLWKVPEESRLVFRAPASSLE 348 (513)
Q Consensus 290 d~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~~~~~d----------------~~i~iwd~~~~~~~~~~~~~~~v~ 348 (513)
+.. ++.... ... ....+.++++.+++.++.+... +.|..|+.. +.............
T Consensus 98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~ 175 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPN 175 (314)
T ss_dssp ETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEE
T ss_pred eCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcc
Confidence 998 665432 211 1235789999999987766543 567777765 44433333334567
Q ss_pred EEEee----cCCe-EE-EEeCCCCEEEEecC-CCCeeE--EeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCC
Q 010296 349 CCCFI----SNDE-FL-SGSDDGSIELWSLL-RKKPVY--IVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSS 419 (513)
Q Consensus 349 ~~~~~----~~~~-~~-~~~~dg~i~iwd~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 419 (513)
.++++ +++. ++ +...++.|.+|++. +++... .+... .
T Consensus 176 ~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~----------------------------------~ 221 (314)
T 1pjx_A 176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHI----------------------------------P 221 (314)
T ss_dssp EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEEC----------------------------------C
T ss_pred eEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEEC----------------------------------C
Confidence 88999 9884 44 44567899999976 343211 11100 1
Q ss_pred CCc-ceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccC
Q 010296 420 SAY-SWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHL 498 (513)
Q Consensus 420 ~~~-~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~ 498 (513)
.+. ..+..++++++|+++++...++.|.+|+..++ ..+..+.. +...+.+++|+|+|++|+++...++.|..|+..
T Consensus 222 ~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g-~~~~~~~~--~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 222 GTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG-QPKMRIRC--PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp CCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB-SCSEEEEC--SSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCC-cEeEEEeC--CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 111 23788999999998888878889999998755 22233322 346789999999999777775777899999875
Q ss_pred C
Q 010296 499 P 499 (513)
Q Consensus 499 ~ 499 (513)
.
T Consensus 299 ~ 299 (314)
T 1pjx_A 299 R 299 (314)
T ss_dssp S
T ss_pred C
Confidence 4
No 202
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.62 E-value=1.3e-13 Score=130.11 Aligned_cols=278 Identities=11% Similarity=0.048 Sum_probs=182.6
Q ss_pred CCCCeEEEEeC-C----ceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEe----
Q 010296 169 EDDSKGFSASK-D----GSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGG---- 239 (513)
Q Consensus 169 ~~~~~l~t~~~-d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~---- 239 (513)
|+++++++... + +.|.++|..+++.+..+ ..-..+ .++++|++++|+++.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I-------------------~vG~~P--gia~SpDgk~lyVan~~~~ 140 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMT-------------------DGGFLP--HPVAAEDGSFFAQASTVFE 140 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEE-------------------EECSSC--EEEECTTSSCEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEE-------------------ECCCCC--ceEECCCCCEEEEEecccc
Confidence 46666665544 2 79999999999988765 111223 799999999888876
Q ss_pred ------CCCcEEEEeCCCcceeeeccCc-------CCCeEEEEEecCCCeEEEEeC--CCcEEEEeCCCCceeEEeeccc
Q 010296 240 ------LDRHIHLWDTRIQEHIQAFPGH-------RGPVSCLTFRQGTSELFSGSF--DRTVKIWNAEDRAYISTLFGHQ 304 (513)
Q Consensus 240 ------~dg~i~vwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~ 304 (513)
.++.|.++|..+++.+..+.-. ......+.|+|++++|+++.. ++.|.++|+.+++.+..+....
T Consensus 141 ~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g 220 (426)
T 3c75_H 141 RIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD 220 (426)
T ss_dssp ETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred ccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC
Confidence 3678999999999988776421 234567899999999998874 5789999999999888776321
Q ss_pred CCeEEEEeeC--CCeEEEEeCCCcEEEEecCCCeeeEEe-----cCCCC-eeEEEeecCCe-EEEEeCCCCEEEEecCCC
Q 010296 305 SEVLTIDCLR--KERVLTVGRDRSMQLWKVPEESRLVFR-----APASS-LECCCFISNDE-FLSGSDDGSIELWSLLRK 375 (513)
Q Consensus 305 ~~v~~~~~~~--~~~~~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~-v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~ 375 (513)
. ....| ...+++.+.||.+.+.++.+++..... ....+ ...+.+.+++. ++..+..+.|.+.|+...
T Consensus 221 --~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~ 296 (426)
T 3c75_H 221 --C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAE 296 (426)
T ss_dssp --E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSS
T ss_pred --c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCC
Confidence 1 22233 235667777888888887544433211 11111 12345577663 555567889999998765
Q ss_pred CeeE--EeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecC----------C
Q 010296 376 KPVY--IVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAG----------N 443 (513)
Q Consensus 376 ~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~----------d 443 (513)
.... .+...... .+.. .........++++|+++.+++... .
T Consensus 297 ~~~v~~~~~~~~~~------------~i~~---------------g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s 349 (426)
T 3c75_H 297 GATFRAPIEALTEA------------ERAD---------------DWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAAS 349 (426)
T ss_dssp CEEECCCEESSCTT------------TGGG---------------TEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCE
T ss_pred ceEEeeeeeecccc------------cccc---------------ccccCCceeeEEcCCCCEEEEEecccccccccCCC
Confidence 4321 11100000 0000 000011224689999887777642 3
Q ss_pred CcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCC-EEEEEecCCCcccccccCCCcc
Q 010296 444 GSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQ-FLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 444 g~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~-~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
+.|.++|+.+. + .+..++......+++|+|||+ +|+++...++.|.++|..+...
T Consensus 350 ~~VsVID~~T~-k---vv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 350 RFVVVLNAETG-E---RINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp EEEEEEETTTC-C---EEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CEEEEEECCCC-e---EEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 57999999887 3 333333445689999999999 8888855799999999877653
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.61 E-value=3.8e-12 Score=116.48 Aligned_cols=234 Identities=10% Similarity=0.023 Sum_probs=166.2
Q ss_pred CcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceee-eccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCcee
Q 010296 219 QSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQ-AFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYI 297 (513)
Q Consensus 219 ~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 297 (513)
+...+.++++.++|+++++...++.|.+|+.. +.... .+..+...+.++++.+++.++++...++.|..|+.. ++.
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~- 89 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII- 89 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-
Confidence 34569999999999987776667899999988 55432 223345679999999999887777778899999986 332
Q ss_pred EEee--cccCCeEEEEeeCCCeEEEEe-CCCcEEEEecCCCeeeEEe--cCCCCeeEEEeecCCeEEEE-eCCCCEEEEe
Q 010296 298 STLF--GHQSEVLTIDCLRKERVLTVG-RDRSMQLWKVPEESRLVFR--APASSLECCCFISNDEFLSG-SDDGSIELWS 371 (513)
Q Consensus 298 ~~~~--~~~~~v~~~~~~~~~~~~~~~-~d~~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~-~~dg~i~iwd 371 (513)
..+. .....+..+++.+++.++++. .++.|.+|+. ++....+. .....+..+++.+++.+..+ ...+.|.+|+
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 168 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRIT 168 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEc
Confidence 2222 244578899999988877655 5788999998 44443332 23456889999999876554 4568899999
Q ss_pred cCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEe
Q 010296 372 LLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAI 451 (513)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~ 451 (513)
. +++.... ... .....+..++++++|.++++...++.|.+|+.
T Consensus 169 ~-~g~~~~~-~~~-----------------------------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 169 E-SGDITEF-KIP-----------------------------------TPASGPVGITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp T-TCCEEEE-ECS-----------------------------------STTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred C-CCcEEEe-eCC-----------------------------------CCCCcceeEEECCCCCEEEEccCCceEEEECC
Confidence 8 6654432 110 01122789999999998887777889999998
Q ss_pred CCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCccccccc
Q 010296 452 ESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGH 497 (513)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~ 497 (513)
++. +..+........+.+++++++|.++++. ..++.|.+|+.
T Consensus 212 -~g~--~~~~~~~~~~~~~~~i~~~~~g~l~v~~-~~~~~i~~~d~ 253 (299)
T 2z2n_A 212 -SGE--ITEFKIPTPNARPHAITAGAGIDLWFTE-WGANKIGRLTS 253 (299)
T ss_dssp -TCC--EEEEECSSTTCCEEEEEECSTTCEEEEE-TTTTEEEEEET
T ss_pred -CCc--EEEEECCCCCCCceeEEECCCCCEEEec-cCCceEEEECC
Confidence 542 2222221234668899999999866655 56788999986
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.60 E-value=1.5e-12 Score=120.15 Aligned_cols=242 Identities=8% Similarity=0.049 Sum_probs=164.1
Q ss_pred ccCCCeEEEEECCCCCeEEE-------EeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEc
Q 010296 157 KHRQSVTAVALSEDDSKGFS-------ASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVS 229 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~t-------~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 229 (513)
..-....+++|++++.++++ +..++.|.+|+..+++......+ ...++...+.+++++
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~---------------~~~~~~~~~~~i~~~ 79 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKP---------------EVNGYGGIPAGCQCD 79 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECC---------------EETTEECCEEEEEEC
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEec---------------ccCCCCCCCceEEEe
Confidence 34456789999999988877 57789999999887765332100 001244568999999
Q ss_pred CC-CCEEEEEeCCCcEEEEeCCCcceeee-ccC----cCCCeEEEEEecCCCeEEEEeCC---------------CcEEE
Q 010296 230 SD-GRYLASGGLDRHIHLWDTRIQEHIQA-FPG----HRGPVSCLTFRQGTSELFSGSFD---------------RTVKI 288 (513)
Q Consensus 230 ~~-~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~i 288 (513)
++ ++++++.. .+.|.+|+.. ++.... ... ....+.+++++++++++++...+ +.|..
T Consensus 80 ~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (314)
T 1pjx_A 80 RDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYC 157 (314)
T ss_dssp SSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEE
T ss_pred cCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEE
Confidence 99 66555444 4579999988 665433 221 22458899999999877776554 56788
Q ss_pred EeCCCCceeEEeecccCCeEEEEee----CCCe-EEEE-eCCCcEEEEecC-CCeee------EEecCC-CCeeEEEeec
Q 010296 289 WNAEDRAYISTLFGHQSEVLTIDCL----RKER-VLTV-GRDRSMQLWKVP-EESRL------VFRAPA-SSLECCCFIS 354 (513)
Q Consensus 289 wd~~~~~~~~~~~~~~~~v~~~~~~----~~~~-~~~~-~~d~~i~iwd~~-~~~~~------~~~~~~-~~v~~~~~~~ 354 (513)
|+.. ++... +..+......++++ +++. ++++ ..++.|.+|++. .+... .+..+. ..+..+++.+
T Consensus 158 ~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~ 235 (314)
T 1pjx_A 158 FTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE 235 (314)
T ss_dssp ECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT
T ss_pred ECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC
Confidence 8775 54433 33344556889999 9884 5544 457899999986 33321 111222 4577899999
Q ss_pred CCeEEE-EeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecC
Q 010296 355 NDEFLS-GSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGG 433 (513)
Q Consensus 355 ~~~~~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 433 (513)
+|.+.+ ...++.|.+|+..+++.+..+.... ..+.+++|+|+
T Consensus 236 ~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~-------------------------------------~~~~~i~~~~d 278 (314)
T 1pjx_A 236 DNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF-------------------------------------EKPSNLHFKPQ 278 (314)
T ss_dssp TCCEEEEEETTTEEEEECTTCBSCSEEEECSS-------------------------------------SCEEEEEECTT
T ss_pred CCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCC-------------------------------------CCceeEEECCC
Confidence 998554 4568899999988777665553211 22899999999
Q ss_pred CCEE-EEecCCCcEEEEEeCCC
Q 010296 434 SDLA-ASGAGNGSVRLWAIESE 454 (513)
Q Consensus 434 ~~~l-~~g~~dg~v~vwd~~~~ 454 (513)
+++| ++...++.|..|++...
T Consensus 279 g~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 279 TKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp SSEEEEEETTTTEEEEEECSSC
T ss_pred CCEEEEEeCCCCeEEEEeCCCC
Confidence 9944 55556788999998754
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.58 E-value=1.7e-12 Score=123.89 Aligned_cols=248 Identities=10% Similarity=0.132 Sum_probs=166.3
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCC--cEEEEeCCCCcee
Q 010296 220 SKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDR--TVKIWNAEDRAYI 297 (513)
Q Consensus 220 ~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~ 297 (513)
-.....|+|+++++++++...++.|++||+.++........... .. ++|+++++.|+++..++ .|.+|+...+...
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 34688999999999888877789999999988776655544333 33 99999999999888766 7999998766544
Q ss_pred EEe----ecccCCeEEEEeeC-CCeEEEEeCCCcEEEEecCCCeeeEE----ecCCCCe--e-EEEeec-CCe-EEEEeC
Q 010296 298 STL----FGHQSEVLTIDCLR-KERVLTVGRDRSMQLWKVPEESRLVF----RAPASSL--E-CCCFIS-NDE-FLSGSD 363 (513)
Q Consensus 298 ~~~----~~~~~~v~~~~~~~-~~~~~~~~~d~~i~iwd~~~~~~~~~----~~~~~~v--~-~~~~~~-~~~-~~~~~~ 363 (513)
..+ ......+.+++++| ++.++++..++.|+.|+..+.....+ ....... . .++|+| ++. +++-..
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 333 22445678899999 68888877788999999987765443 1111111 2 899999 466 446667
Q ss_pred CCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec-C
Q 010296 364 DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA-G 442 (513)
Q Consensus 364 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~-~ 442 (513)
.+.|+.|+.... +..+...... .. +. + +. ...........++++|+|+++++-+ .
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~-~g---~~-d-g~----------------~~~~~~~~P~gia~d~dG~lyvad~~~ 343 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQ-KT---VQ-D-GL----------------REEALFAQPNGMTVDEDGNFYIVDGFK 343 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTC-CS---CB-C-EE----------------GGGCBCSSEEEEEECTTCCEEEEETTT
T ss_pred CCEEEEEecCCC--EEEEEeCCCC-CC---cC-C-Cc----------------ccccEeCCCeEEEEeCCCCEEEEeCCC
Confidence 888999987644 2222211100 00 00 0 00 0001122378999999999888888 8
Q ss_pred CCcEEEEEeCCCCcceeeeeecC-------------cccEEEEEEeecCCCEEEEEecCCCcccccc
Q 010296 443 NGSVRLWAIESETKDIQPLYNLP-------------LVGFVNSLAFAKSGQFLIAGVGQEPRLGRWG 496 (513)
Q Consensus 443 dg~v~vwd~~~~~~~~~~~~~~~-------------~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~ 496 (513)
++.|+.|++.++ .+..+...+ .......|+++|+|.++++- ...++|+.+.
T Consensus 344 ~~~I~~~~~~~G--~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad-~~n~~Ir~i~ 407 (409)
T 3hrp_A 344 GYCLRKLDILDG--YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAE-AWGKAIRKYA 407 (409)
T ss_dssp TCEEEEEETTTT--EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEE-STTCEEEEEE
T ss_pred CCEEEEEECCCC--EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEE-CCCCeEEEEE
Confidence 899999997766 233332210 12458899999997666665 6777777664
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.57 E-value=8.5e-12 Score=117.33 Aligned_cols=251 Identities=8% Similarity=-0.009 Sum_probs=165.2
Q ss_pred CCcccchhhhhccCCCeEEEEECCCCCeEEEEe----------CCceEEEEeCCCCccccccCCChhhhccCCCCCCCCC
Q 010296 146 PEATDEFRVLLKHRQSVTAVALSEDDSKGFSAS----------KDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGR 215 (513)
Q Consensus 146 ~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (513)
....+.+..+..-..+ .++|+|||++|+++. .++.|.+||..+.+.+..+.-.. .. .
T Consensus 54 ~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~-------~~----~ 120 (373)
T 2mad_H 54 AGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPD-------AP----R 120 (373)
T ss_pred CCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCC-------cc----c
Confidence 3334444444433334 999999999999886 36789999999887766541100 00 0
Q ss_pred CCCCcccEEEEEEcCCCCEEEEEeC--CCcEEEEeCCCcceeee-ccCcCCCeEEEEEecCCC-eEEEEeCCCcEEEEeC
Q 010296 216 ATKQSKHILALAVSSDGRYLASGGL--DRHIHLWDTRIQEHIQA-FPGHRGPVSCLTFRQGTS-ELFSGSFDRTVKIWNA 291 (513)
Q Consensus 216 ~~~~~~~v~~~~~s~~~~~l~s~~~--dg~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~ 291 (513)
..+......++|+|+|++|++++. ++.|.++| .+++.+.. +... . ++.+.|.++ .+++.+.||.+.+++.
T Consensus 121 -~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 121 -FDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred -cccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC
Confidence 001123458999999999998874 47899999 99998877 6532 2 245556553 4567778999999999
Q ss_pred CCCceeEEee-----cccCCe-EEEEeeCC-CeEEEEeCCCcEEEEecCCCeeeE---Eec----------CCCCeeEEE
Q 010296 292 EDRAYISTLF-----GHQSEV-LTIDCLRK-ERVLTVGRDRSMQLWKVPEESRLV---FRA----------PASSLECCC 351 (513)
Q Consensus 292 ~~~~~~~~~~-----~~~~~v-~~~~~~~~-~~~~~~~~d~~i~iwd~~~~~~~~---~~~----------~~~~v~~~~ 351 (513)
+++.+.... ....++ ....+.++ +.++..+..+.+.+.|+....... +.. .......+.
T Consensus 195 -~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~ 273 (373)
T 2mad_H 195 -AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVA 273 (373)
T ss_pred -CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEE
Confidence 877663322 111121 22334443 455555577899999986543221 100 112234467
Q ss_pred eecCCe-EEEEeC----------CCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCC
Q 010296 352 FISNDE-FLSGSD----------DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSS 420 (513)
Q Consensus 352 ~~~~~~-~~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 420 (513)
+++++. +++... .+.|.++|+.+++.+..+.....
T Consensus 274 ~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~---------------------------------- 319 (373)
T 2mad_H 274 YLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHD---------------------------------- 319 (373)
T ss_pred ECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCC----------------------------------
Confidence 888874 433322 35799999999999888864332
Q ss_pred CcceEEEEEEecCCC-EEEEec-CCCcEEEEEeCCC
Q 010296 421 AYSWVSSVTVCGGSD-LAASGA-GNGSVRLWAIESE 454 (513)
Q Consensus 421 ~~~~i~~~~~s~~~~-~l~~g~-~dg~v~vwd~~~~ 454 (513)
...++|+|+|+ +|+++. .++.|.+||+.+.
T Consensus 320 ----p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 320 ----VDAISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred ----cCeEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 78999999999 788877 5899999999987
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.57 E-value=2.7e-12 Score=122.46 Aligned_cols=248 Identities=10% Similarity=0.030 Sum_probs=166.7
Q ss_pred CCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE
Q 010296 159 RQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG 238 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 238 (513)
-.....|+|+|+++++++...++.|++||..++...... .. ..... ++|+|+++.|+++
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~-------------------~~-~~~~~-ia~~~~g~~l~~~ 188 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVH-------------------PG-FKGGK-PAVTKDKQRVYSI 188 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEE-------------------ET-CCBCB-CEECTTSSEEEEE
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEee-------------------cc-CCCCc-eeEecCCCcEEEE
Confidence 346889999999997778777899999999877654422 01 11233 8999999999988
Q ss_pred eCCC--cEEEEeCCCcceeeec----cCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEE----eecccCCe-
Q 010296 239 GLDR--HIHLWDTRIQEHIQAF----PGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYIST----LFGHQSEV- 307 (513)
Q Consensus 239 ~~dg--~i~vwd~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~~~v- 307 (513)
..++ .|.+|+...+.....+ ......+.+++++|++..|+.+..++.|+.||+.++..... ..+.....
T Consensus 189 d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P 268 (409)
T 3hrp_A 189 GWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNP 268 (409)
T ss_dssp BSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSS
T ss_pred ecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCc
Confidence 8766 7999987766543333 22456678999999666666677788999999987754322 22222222
Q ss_pred E-EEEeeC-CCeEEEEe-CCCcEEEEecCCCeeeEEecC---------------CCCeeEEEeecCCeEE-EEe-CCCCE
Q 010296 308 L-TIDCLR-KERVLTVG-RDRSMQLWKVPEESRLVFRAP---------------ASSLECCCFISNDEFL-SGS-DDGSI 367 (513)
Q Consensus 308 ~-~~~~~~-~~~~~~~~-~d~~i~iwd~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~~-~~~-~dg~i 367 (513)
. .++|+| ++.++++. ..+.|+.|+..... ..+... ......++++++|.|+ +-. .++.|
T Consensus 269 ~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I 347 (409)
T 3hrp_A 269 GPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCL 347 (409)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTTCCE-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEE
T ss_pred cccEEEeCCCCEEEEEeCCCCEEEEEecCCCE-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEE
Confidence 3 899999 57776554 57889999977552 222222 2347789999999754 555 68899
Q ss_pred EEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEE
Q 010296 368 ELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVR 447 (513)
Q Consensus 368 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~ 447 (513)
+.|++.++............ . + ..+. ...........|+++++|.++++-..++.|+
T Consensus 348 ~~~~~~~G~v~~~~g~~~~~--g---~------------~~g~------~~~~~~~~P~giavd~~g~lyVad~~n~~Ir 404 (409)
T 3hrp_A 348 RKLDILDGYVSTVAGQVDVA--S---Q------------IDGT------PLEATFNYPYDICYDGEGGYWIAEAWGKAIR 404 (409)
T ss_dssp EEEETTTTEEEEEEECTTCB--S---C------------CCBS------TTTCCBSSEEEEEECSSSEEEEEESTTCEEE
T ss_pred EEEECCCCEEEEEeCCCCCC--C---c------------CCCC------hhceEeCCceEEEEcCCCCEEEEECCCCeEE
Confidence 99998777643332211000 0 0 0000 0011223489999999998888888889998
Q ss_pred EEEe
Q 010296 448 LWAI 451 (513)
Q Consensus 448 vwd~ 451 (513)
.+.+
T Consensus 405 ~i~~ 408 (409)
T 3hrp_A 405 KYAV 408 (409)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8876
No 208
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.56 E-value=5e-13 Score=124.43 Aligned_cols=236 Identities=9% Similarity=0.063 Sum_probs=160.8
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcc-----------eeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEe
Q 010296 222 HILALAVSSDGRYLASGGLDRHIHLWDTRIQE-----------HIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWN 290 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 290 (513)
+++.+++++...+|++|+.++ +.+|++.... ..... .+.. |+.|+| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 588999999999999999875 6679865443 11122 2555 999999 88999988 889999999
Q ss_pred CCCCceeEEeecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCeEEEEeCCCCEEEE
Q 010296 291 AEDRAYISTLFGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELW 370 (513)
Q Consensus 291 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iw 370 (513)
+.+.........+...+.++.+.+.. ++++..+|.|.+|++..+.... +...|.|++|+|.| ++.|..||++++|
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG-~~vg~~dg~i~~~ 187 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ-LAVLLKDRSFQSF 187 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE-EEEEETTSCEEEE
T ss_pred chhhhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc-eEEEEcCCcEEEE
Confidence 98877666677778888888877653 8889999999999999776543 34589999999999 7889999999999
Q ss_pred ecCCCCe--eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecC------
Q 010296 371 SLLRKKP--VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAG------ 442 (513)
Q Consensus 371 d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~------ 442 (513)
+...+.. ..++....... ....+...|.+|+|.+++.+|++=+.
T Consensus 188 ~~~~~~~~~k~~I~~Pp~~~----------------------------~~~~~~~~V~sI~wl~~~~flv~y~~~~~~~~ 239 (388)
T 1xip_A 188 AWRNGEMEKQFEFSLPSELE----------------------------ELPVEEYSPLSVTILSPQDFLAVFGNVISETD 239 (388)
T ss_dssp EEETTEEEEEEEECCCHHHH----------------------------TSCTTTSEEEEEEESSSSEEEEEEECCCCSSC
T ss_pred cCCCccccccceecCCcccc----------------------------cccCCCeeEEEEEEecCCeEEEEEcCCCCCcC
Confidence 8877765 44553211000 00123455999999999988886321
Q ss_pred -----CCcEEEEEeCCCCcceeee-------ee---cCcccEEEEEEeecCCC-EEEEEecCCCcccccc
Q 010296 443 -----NGSVRLWAIESETKDIQPL-------YN---LPLVGFVNSLAFAKSGQ-FLIAGVGQEPRLGRWG 496 (513)
Q Consensus 443 -----dg~v~vwd~~~~~~~~~~~-------~~---~~~~~~v~~v~~sp~~~-~l~~~~~~dg~v~~W~ 496 (513)
+-.++|.....+...++.+ .. .++.....=-.|.|+.+ +++++++..--|.+++
T Consensus 240 ~~~~~~~~~~ii~~~~~~~~f~~~~d~~~~fg~~~R~~~~~~~~l~~w~~~~~~l~iv~Ss~S~di~il~ 309 (388)
T 1xip_A 240 DEVSYDQKMYIIKHIDGSASFQETFDITPPFGQIVRFPYMYKVTLSGLIEPDANVNVLASSCSSEVSIWD 309 (388)
T ss_dssp SSCCCCEEEEEEEEETTEEEEEEESSSCCCCCCSCCCCCEEEEEEEEEEETTEEEEEEEETTCSBCEEEC
T ss_pred cccCCcceEEEEEcCCCCceeEccccCcCCcCCccCCceeeeeehhcccccCCcEEEEeCCCCcceEEec
Confidence 1146666632221111111 00 11112233346777665 4445555556677774
No 209
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.56 E-value=1.8e-12 Score=128.14 Aligned_cols=230 Identities=10% Similarity=0.004 Sum_probs=161.9
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCC--CCceeEEeecccCCe
Q 010296 230 SDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAE--DRAYISTLFGHQSEV 307 (513)
Q Consensus 230 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~v 307 (513)
|.+.++++...++.|.++|..+++.+..+.. ...+..+.|+|+++++++++.++.|.+||+. +++.+..+.. ....
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P 242 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEA 242 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCC
Confidence 4455677777889999999999999988874 3467799999999999999999999999996 7777777764 3346
Q ss_pred EEEEee----CCCeEE-EEe-CCCcEEEEecCCCeeeEEecC------------CCCeeEEEeecCCe--EEEEeCCCCE
Q 010296 308 LTIDCL----RKERVL-TVG-RDRSMQLWKVPEESRLVFRAP------------ASSLECCCFISNDE--FLSGSDDGSI 367 (513)
Q Consensus 308 ~~~~~~----~~~~~~-~~~-~d~~i~iwd~~~~~~~~~~~~------------~~~v~~~~~~~~~~--~~~~~~dg~i 367 (513)
..++|+ |+++++ +++ ..++|.++|..+.+.+..... ...+..+.+++++. ++.....|.|
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 789999 688544 444 579999999988776632211 22566777777753 4466678999
Q ss_pred EEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEec-CCCcE
Q 010296 368 ELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGA-GNGSV 446 (513)
Q Consensus 368 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~-~dg~v 446 (513)
.++|....+.+....... ......+.|+|+|++|++++ .++.|
T Consensus 323 ~~vd~~~~~~~~v~~i~~------------------------------------~~~~~d~~~~pdgr~~~va~~~sn~V 366 (567)
T 1qks_A 323 LLVDYTDLNNLKTTEISA------------------------------------ERFLHDGGLDGSHRYFITAANARNKL 366 (567)
T ss_dssp EEEETTCSSEEEEEEEEC------------------------------------CSSEEEEEECTTSCEEEEEEGGGTEE
T ss_pred EEEecCCCccceeeeeec------------------------------------cccccCceECCCCCEEEEEeCCCCeE
Confidence 999988765433322111 01267889999999887665 57899
Q ss_pred EEEEeCCCCcceeeee---ecCcccEEEEEEeecCCCEE-EEEecCCCcccccccCC
Q 010296 447 RLWAIESETKDIQPLY---NLPLVGFVNSLAFAKSGQFL-IAGVGQEPRLGRWGHLP 499 (513)
Q Consensus 447 ~vwd~~~~~~~~~~~~---~~~~~~~v~~v~~sp~~~~l-~~~~~~dg~v~~W~~~~ 499 (513)
.++|+.++ +....+. ..+|.+.-..+ ++|++..+ +++...++.|.+++..+
T Consensus 367 ~ViD~~t~-kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 367 VVIDTKEG-KLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EEEETTTT-EEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred EEEECCCC-cEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 99999987 3333332 23443311112 68885544 44433568999998876
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.55 E-value=5.7e-12 Score=115.16 Aligned_cols=226 Identities=10% Similarity=0.001 Sum_probs=150.9
Q ss_pred cEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEe
Q 010296 222 HILALAVSSD-GRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTL 300 (513)
Q Consensus 222 ~v~~~~~s~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 300 (513)
-.-+..|+|+ +.++++....+.|+.|+..++... .+. ....+.+++++++++++++ . ++.|.+||..+++.....
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEE
Confidence 3567899995 456666667899999999877652 332 4567999999999995544 4 568999999887654332
Q ss_pred ec----ccCCeEEEEeeCCCeEEEEeC------------CCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-E-EEEe
Q 010296 301 FG----HQSEVLTIDCLRKERVLTVGR------------DRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-F-LSGS 362 (513)
Q Consensus 301 ~~----~~~~v~~~~~~~~~~~~~~~~------------d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~-~~~~ 362 (513)
.. ....++.+.+.|+++++++.. .+.|+.++.. +..............++|+|++. + ++.+
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~ 168 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDS 168 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEG
T ss_pred ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecC
Confidence 21 123478899999998876652 1344444443 23333333334567899999985 3 4666
Q ss_pred CCCCEEEEec--CCCCeeE--EeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEE
Q 010296 363 DDGSIELWSL--LRKKPVY--IVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAA 438 (513)
Q Consensus 363 ~dg~i~iwd~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 438 (513)
..+.|.+|++ .++.... .+... ......+..+++.++|++.+
T Consensus 169 ~~~~i~~~~~d~~~G~~~~~~~~~~~----------------------------------~~~~~~p~g~~~d~~G~lwv 214 (297)
T 3g4e_A 169 LSYSVDAFDYDLQTGQISNRRSVYKL----------------------------------EKEEQIPDGMCIDAEGKLWV 214 (297)
T ss_dssp GGTEEEEEEECTTTCCEEEEEEEEEC----------------------------------CGGGCEEEEEEEBTTSCEEE
T ss_pred CCCcEEEEeccCCCCcccCcEEEEEC----------------------------------CCCCCCCCeeEECCCCCEEE
Confidence 7889999987 4554321 11100 11112378899999998888
Q ss_pred EecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEee-cCCCEEEEEecCC
Q 010296 439 SGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFA-KSGQFLIAGVGQE 489 (513)
Q Consensus 439 ~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~s-p~~~~l~~~~~~d 489 (513)
+....+.|.+|+..++ +.+..+.. +...+++++|. |+++.|++++..+
T Consensus 215 a~~~~~~v~~~d~~tG-~~~~~i~~--p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 215 ACYNGGRVIRLDPVTG-KRLQTVKL--PVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEETTTEEEEECTTTC-CEEEEEEC--SSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEcCCCEEEEEcCCCc-eEEEEEEC--CCCCceEEEEeCCCCCEEEEEcCCc
Confidence 8777888999998876 33333332 34578999999 8998887775544
No 211
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.54 E-value=2.3e-12 Score=120.39 Aligned_cols=279 Identities=10% Similarity=0.046 Sum_probs=172.7
Q ss_pred CCeEEEEECCCCCeEEEEe--CCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEE
Q 010296 160 QSVTAVALSEDDSKGFSAS--KDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLAS 237 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~t~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 237 (513)
..+..|+++|+|+++++.. .++.++||.+.++... .+ +... .....|...+..++++++++++++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~-p~~~-----------~~~~~~~~~p~gv~~d~~g~L~v~ 83 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PF-PPQS-----------GNAIITFDTVLGIKSDGNGIVWML 83 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ES-CCCC-----------SSCCCCCSCEEEEEECSSSEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cC-CCcc-----------cCcccceeEeeEEEEcCCCcEEEE
Confidence 6889999999999988864 2343556655444322 11 1100 012346678999999999886665
Q ss_pred EeC-----CCcEEEEeCCCcceeeeccC------cCCCeEEEEEecCCCeEE-EEe---CCCcEEEEeCCCCceeEEeec
Q 010296 238 GGL-----DRHIHLWDTRIQEHIQAFPG------HRGPVSCLTFRQGTSELF-SGS---FDRTVKIWNAEDRAYISTLFG 302 (513)
Q Consensus 238 ~~~-----dg~i~vwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~-~~~---~dg~i~iwd~~~~~~~~~~~~ 302 (513)
-.. .+.|.+||+.+++.+..+.. +...+..+++++++..++ +-. .++.|.+||+.+++....+.+
T Consensus 84 D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~ 163 (343)
T 2qe8_A 84 DNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQG 163 (343)
T ss_dssp ECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTT
T ss_pred cCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecC
Confidence 543 57899999999987665542 224568999998655554 444 578999999998887666654
Q ss_pred ccCCeE-EEEeeCCCeEE-EEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEEEeCCC-CEEEEecC---CC
Q 010296 303 HQSEVL-TIDCLRKERVL-TVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLSGSDDG-SIELWSLL---RK 375 (513)
Q Consensus 303 ~~~~v~-~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~dg-~i~iwd~~---~~ 375 (513)
|..... ...+..++..+ +...++.+..|. ..+..++++|++. |+++...+ .|..++.. .+
T Consensus 164 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~-------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 164 YPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH-------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNL 230 (343)
T ss_dssp CTTTSCCSCCCEETTEECBEECTTSCEECCC-------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCT
T ss_pred CCcccccccceeECCEEEEeccCCCceecee-------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCC
Confidence 322110 13344456443 566777776553 2356799999985 55555554 44444321 11
Q ss_pred CeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCC
Q 010296 376 KPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESET 455 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~ 455 (513)
.. .. ..+.. .+....+......++++++|.++++...++.|.+|+..++
T Consensus 231 ~~-~~------------------~~~~~-----------~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G- 279 (343)
T 2qe8_A 231 QL-TD------------------AELGS-----------KIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADR- 279 (343)
T ss_dssp TC-CH------------------HHHHT-----------TCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT-
T ss_pred CC-Ch------------------hhhhc-----------ceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCC-
Confidence 00 00 00000 0000000112567899999999999999999999998444
Q ss_pred cceeeeeecCcccEEEEEEeecCCCEEEEEecCCCccccccc
Q 010296 456 KDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGH 497 (513)
Q Consensus 456 ~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~ 497 (513)
. +..+...+....+.+++|.++|.+++++ +..+++.+|..
T Consensus 280 ~-~~~~~~~~~~~~p~~va~~~~g~l~v~~-~~~~~~~~f~~ 319 (343)
T 2qe8_A 280 A-YKLLVTDEKLSWTDSFNFGSDGYLYFDC-NQLHHSAPLNA 319 (343)
T ss_dssp E-EEEEEECGGGSCEEEEEECTTSCEEEEE-CCGGGSGGGBT
T ss_pred C-EEEEEECCceecCCeeEECCCCcEEEEe-Ccccccccccc
Confidence 2 3333333335568999999999888877 55567766653
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.53 E-value=6.1e-11 Score=108.43 Aligned_cols=234 Identities=10% Similarity=0.015 Sum_probs=165.1
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceee-eccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeE
Q 010296 220 SKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQ-AFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYIS 298 (513)
Q Consensus 220 ~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 298 (513)
...+.+|++.++|+++++...++.|.+|+.. ++... .+..+...+.++++.+++.++++...++.|..||.. ++...
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~ 96 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE 96 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE
Confidence 4568899999999988877778999999987 55433 233344678999999999877777668899999987 55432
Q ss_pred -EeecccCCeEEEEeeCCCeEEEEeC-CCcEEEEecCCCeeeEEe--cCCCCeeEEEeecCCeEEEEe-CCCCEEEEecC
Q 010296 299 -TLFGHQSEVLTIDCLRKERVLTVGR-DRSMQLWKVPEESRLVFR--APASSLECCCFISNDEFLSGS-DDGSIELWSLL 373 (513)
Q Consensus 299 -~~~~~~~~v~~~~~~~~~~~~~~~~-d~~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~-~dg~i~iwd~~ 373 (513)
.+......+..+++.+++.++.+.. ++.|..|+.. +....+. .....+..+++.+++.+..+. .++.|.+|+.
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~- 174 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN- 174 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-
Confidence 2222345688999999888776655 7889999987 4444332 234568889999988765544 4778999998
Q ss_pred CCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCC
Q 010296 374 RKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIES 453 (513)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~ 453 (513)
+++... +... .....+..+++.++|.++++....+.|.+|+. +
T Consensus 175 ~g~~~~-~~~~-----------------------------------~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~ 217 (300)
T 2qc5_A 175 TGKLEE-YPLP-----------------------------------TNAAAPVGITSGNDGALWFVEIMGNKIGRITT-T 217 (300)
T ss_dssp TCCEEE-EECS-----------------------------------STTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred CCcEEE-eeCC-----------------------------------CCCCCcceEEECCCCCEEEEccCCCEEEEEcC-C
Confidence 555433 2210 11123889999999988887777788999998 3
Q ss_pred CCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCccccccc
Q 010296 454 ETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGH 497 (513)
Q Consensus 454 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~ 497 (513)
+ . +...........+.+++++++|.+.++. ..++.|.+|+.
T Consensus 218 g-~-~~~~~~~~~~~~~~~i~~d~~g~l~v~~-~~~~~i~~~~~ 258 (300)
T 2qc5_A 218 G-E-ISEYDIPTPNARPHAITAGKNSEIWFTE-WGANQIGRITN 258 (300)
T ss_dssp C-C-EEEEECSSTTCCEEEEEECSTTCEEEEE-TTTTEEEEECT
T ss_pred C-c-EEEEECCCCCCCceEEEECCCCCEEEec-cCCCeEEEECC
Confidence 3 1 2222111234568899999999866655 66788988886
No 213
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.53 E-value=3.2e-13 Score=125.69 Aligned_cols=179 Identities=12% Similarity=0.085 Sum_probs=134.6
Q ss_pred CeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeC
Q 010296 161 SVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGL 240 (513)
Q Consensus 161 ~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 240 (513)
+++.+++++...+|++|+.++ +++|++........- ......+. ....+.. |+.|+| ++++|+++ .
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~--------~~~~~~~~-~~~~lp~-V~~l~f--d~~~L~v~-~ 104 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITS--------DSTPLTFK-WEKEIPD-VIFVCF--HGDQVLVS-T 104 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHS--------SSCCCCCS-EEEECTT-EEEEEE--ETTEEEEE-E
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhcc--------ccccccce-EEeeCCC-eeEEEE--CCCEEEEE-c
Confidence 799999999999999999985 555987644311000 00000010 1123556 999999 89999999 7
Q ss_pred CCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeCCCeEEE
Q 010296 241 DRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRKERVLT 320 (513)
Q Consensus 241 dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 320 (513)
++.|++||+.+......+..|...+.++.+.+. .+++++.||.|.+||+.++.... +...|.|++|+|+| ++.
T Consensus 105 ~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG-~~v 177 (388)
T 1xip_A 105 RNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ-LAV 177 (388)
T ss_dssp SSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE-EEE
T ss_pred CCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc-eEE
Confidence 899999999877766666677788888877654 38899999999999999877643 45689999999999 778
Q ss_pred EeCCCcEEEEecCCCee--e-EE------e---cCCCCeeEEEeecCCeEEE
Q 010296 321 VGRDRSMQLWKVPEESR--L-VF------R---APASSLECCCFISNDEFLS 360 (513)
Q Consensus 321 ~~~d~~i~iwd~~~~~~--~-~~------~---~~~~~v~~~~~~~~~~~~~ 360 (513)
+..||++++|+...... . .+ . .+...|.++.|.+++.|++
T Consensus 178 g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 178 LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence 99999999999887763 2 33 1 2568899999999987553
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.52 E-value=3.4e-12 Score=117.16 Aligned_cols=229 Identities=12% Similarity=0.062 Sum_probs=156.2
Q ss_pred hhhhhccCCCeEEEEECCCCC-eEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcC
Q 010296 152 FRVLLKHRQSVTAVALSEDDS-KGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSS 230 (513)
Q Consensus 152 ~~~~~~h~~~V~~~~~s~~~~-~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 230 (513)
+..+..+.....+..|+|+++ ++++...++.|..|+.. +.. ..+ ..+...+..+++++
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~-~~~-------------------~~~~~~~~gl~~d~ 95 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV-DVL-------------------LDATAFTNGNAVDA 95 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE-EEE-------------------EESCSCEEEEEECT
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE-EEE-------------------eCCCCccceeeECC
Confidence 334445556678899999998 55677788999999984 432 211 22345688999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCcceeeecc---C-cCCCeEEEEEecCCCeEEE----EeC-------------CCcEEEE
Q 010296 231 DGRYLASGGLDRHIHLWDTRIQEHIQAFP---G-HRGPVSCLTFRQGTSELFS----GSF-------------DRTVKIW 289 (513)
Q Consensus 231 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~---~-~~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~iw 289 (513)
+|+++++...++.|.+|+.. ++...... + ....++.+++.++|+++++ |.. .+.|+.|
T Consensus 96 dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~ 174 (305)
T 3dr2_A 96 QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRL 174 (305)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEE
T ss_pred CCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEE
Confidence 99977666666889999976 54322211 1 1234678999999998876 332 2568888
Q ss_pred eCCCCceeEEeecccCCeEEEEeeCCCe-EEEEeCC------CcEEEEecCCCeee----EEecCCCCeeEEEeecCCeE
Q 010296 290 NAEDRAYISTLFGHQSEVLTIDCLRKER-VLTVGRD------RSMQLWKVPEESRL----VFRAPASSLECCCFISNDEF 358 (513)
Q Consensus 290 d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d------~~i~iwd~~~~~~~----~~~~~~~~v~~~~~~~~~~~ 358 (513)
+..+++..... .......++|+|++. ++++... +.|.+|++...... ...........+++.++|.+
T Consensus 175 d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~l 252 (305)
T 3dr2_A 175 PPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWL 252 (305)
T ss_dssp CSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCE
T ss_pred cCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCE
Confidence 88776654433 445678899999986 5565554 68999998754311 11222344567889999987
Q ss_pred EEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEE
Q 010296 359 LSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAA 438 (513)
Q Consensus 359 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 438 (513)
.+++.+| |.+|+. .++.+..+.... .+.+++|+++++.|+
T Consensus 253 wv~~~~g-v~~~~~-~g~~~~~~~~~~--------------------------------------~~~~~~f~~d~~~L~ 292 (305)
T 3dr2_A 253 WSSSGTG-VCVFDS-DGQLLGHIPTPG--------------------------------------TASNCTFDQAQQRLF 292 (305)
T ss_dssp EECCSSE-EEEECT-TSCEEEEEECSS--------------------------------------CCCEEEECTTSCEEE
T ss_pred EEecCCc-EEEECC-CCCEEEEEECCC--------------------------------------ceeEEEEeCCCCEEE
Confidence 7777554 999997 566666664321 178899999998888
Q ss_pred EecCCC
Q 010296 439 SGAGNG 444 (513)
Q Consensus 439 ~g~~dg 444 (513)
.++.++
T Consensus 293 it~~~~ 298 (305)
T 3dr2_A 293 ITGGPC 298 (305)
T ss_dssp EEETTE
T ss_pred EEcCCe
Confidence 877764
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.49 E-value=2.1e-11 Score=111.35 Aligned_cols=225 Identities=8% Similarity=0.030 Sum_probs=148.7
Q ss_pred cCCCeEEEEECCCC-CeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEE
Q 010296 158 HRQSVTAVALSEDD-SKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLA 236 (513)
Q Consensus 158 h~~~V~~~~~s~~~-~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 236 (513)
+..-.-+..|+|++ .++++....+.|..|+..++.... + .....+.+++++++|++++
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~--------------------~~~~~~~~i~~~~dG~l~v 69 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-V--------------------TMDAPVSSVALRQSGGYVA 69 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-E--------------------ECSSCEEEEEEBTTSSEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-E--------------------eCCCceEEEEECCCCCEEE
Confidence 34456688999965 455566778999999998765422 1 2245689999999999555
Q ss_pred EEeCCCcEEEEeCCCcceeeeccC----cCCCeEEEEEecCCCeEEEEeCC---------CcEEEEeCCCCceeEEeecc
Q 010296 237 SGGLDRHIHLWDTRIQEHIQAFPG----HRGPVSCLTFRQGTSELFSGSFD---------RTVKIWNAEDRAYISTLFGH 303 (513)
Q Consensus 237 s~~~dg~i~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~ 303 (513)
+ . ++.|.+||..+++....... ....++.++++|+|+++++.... ....||.+.....+..+...
T Consensus 70 ~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~ 147 (297)
T 3g4e_A 70 T-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ 147 (297)
T ss_dssp E-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE
T ss_pred E-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec
Confidence 4 4 56799999987765432221 22357899999999966654321 22344444332223333334
Q ss_pred cCCeEEEEeeCCCe-EE-EEeCCCcEEEEecC--CCeee---EE---ecCCCCeeEEEeecCCeEEEE-eCCCCEEEEec
Q 010296 304 QSEVLTIDCLRKER-VL-TVGRDRSMQLWKVP--EESRL---VF---RAPASSLECCCFISNDEFLSG-SDDGSIELWSL 372 (513)
Q Consensus 304 ~~~v~~~~~~~~~~-~~-~~~~d~~i~iwd~~--~~~~~---~~---~~~~~~v~~~~~~~~~~~~~~-~~dg~i~iwd~ 372 (513)
....+.++|+|++. ++ +.+..+.|.+|++. ++... .+ ......+..+++.++|.+.++ ...+.|.+||.
T Consensus 148 ~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 148 VDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDP 227 (297)
T ss_dssp ESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECT
T ss_pred cccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcC
Confidence 45578999999885 44 44457889999873 33321 11 122346778999999986544 45678999999
Q ss_pred CCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEe-cCCCEEEEecC
Q 010296 373 LRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVC-GGSDLAASGAG 442 (513)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~g~~ 442 (513)
.+++.+..+.... ..+++++|. |+++.|++++.
T Consensus 228 ~tG~~~~~i~~p~-------------------------------------~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 228 VTGKRLQTVKLPV-------------------------------------DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp TTCCEEEEEECSS-------------------------------------SBEEEEEEESGGGCEEEEEEB
T ss_pred CCceEEEEEECCC-------------------------------------CCceEEEEeCCCCCEEEEEcC
Confidence 9899888876432 128999998 88876665543
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.48 E-value=4.9e-11 Score=110.48 Aligned_cols=224 Identities=9% Similarity=-0.052 Sum_probs=147.5
Q ss_pred EEEEEEcCCC-CEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEee
Q 010296 223 ILALAVSSDG-RYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLF 301 (513)
Q Consensus 223 v~~~~~s~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 301 (513)
..+..|+|++ .++++...++.|.+|+..+++.. .+. ....+.+++|+++++++++. . ..|.+||..+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEee
Confidence 5678899974 55666667889999999877643 232 34679999999999876654 3 449999998877543222
Q ss_pred c----ccCCeEEEEeeCCCeEEEEeC-------CCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-E-EEEeCCCCEE
Q 010296 302 G----HQSEVLTIDCLRKERVLTVGR-------DRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-F-LSGSDDGSIE 368 (513)
Q Consensus 302 ~----~~~~v~~~~~~~~~~~~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~-~~~~~dg~i~ 368 (513)
. ....+..+.+.++++++++.. .+.|..++ ++....+.........++|++++. + ++.+.++.|.
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence 1 123578999999998776553 24566666 444433333334567899999985 4 4555678999
Q ss_pred EEecC--CC-Cee--EEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCC
Q 010296 369 LWSLL--RK-KPV--YIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGN 443 (513)
Q Consensus 369 iwd~~--~~-~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d 443 (513)
+|++. ++ ... ..+... ......+..+++.++|.+.++...+
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~----------------------------------~~~~~~p~gi~~d~~G~lwva~~~~ 250 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDS----------------------------------TGIKGGMDGSVCDAEGHIWNARWGE 250 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEEC----------------------------------TTSSSEEEEEEECTTSCEEEEEETT
T ss_pred EEEcccccCCcccCceEEEEC----------------------------------CCCCCCCCeeEECCCCCEEEEEeCC
Confidence 99986 44 211 111100 0011226789999999888777667
Q ss_pred CcEEEEEeCCCCcceeeeeecCcccEEEEEEee-cCCCEEEEEecCCC
Q 010296 444 GSVRLWAIESETKDIQPLYNLPLVGFVNSLAFA-KSGQFLIAGVGQEP 490 (513)
Q Consensus 444 g~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~s-p~~~~l~~~~~~dg 490 (513)
+.|.+|+. ++ ..+..+.. +...+++++|+ |++..|++++...+
T Consensus 251 ~~v~~~d~-~g-~~~~~i~~--~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 251 GAVDRYDT-DG-NHIARYEV--PGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp TEEEEECT-TC-CEEEEEEC--SCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred CEEEEECC-CC-CEEEEEEC--CCCCcEEEEEecCCCCEEEEEecCCC
Confidence 88999997 33 33333322 34569999999 99888877645553
No 217
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.48 E-value=5.3e-12 Score=129.53 Aligned_cols=238 Identities=10% Similarity=0.014 Sum_probs=155.8
Q ss_pred ccCCCeEEEEECCCCCeEEEE-----eCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC
Q 010296 157 KHRQSVTAVALSEDDSKGFSA-----SKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD 231 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~t~-----~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 231 (513)
+|...|..++|||||++||-+ +...+|++||+.+++.+... .+......++|+ |
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~--------------------~~~~k~~~~~Ws-D 184 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP--------------------LKDVKFSGISWL-G 184 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE--------------------EEEEESCCCEEE-T
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc--------------------cCCceeccEEEe-C
Confidence 466789999999999999843 23367999999998854311 001112567899 9
Q ss_pred CCEEEEEeCCC-------------cEEEEeCCCcc----eeeeccC-cCCCeEEEEEecCCCeEEEEeC----CCcEEEE
Q 010296 232 GRYLASGGLDR-------------HIHLWDTRIQE----HIQAFPG-HRGPVSCLTFRQGTSELFSGSF----DRTVKIW 289 (513)
Q Consensus 232 ~~~l~s~~~dg-------------~i~vwd~~~~~----~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----dg~i~iw 289 (513)
++.|+.++.+. .|++|++.+.. ++..... |...+..+.|+|++++|+.... .+.|+++
T Consensus 185 g~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~ 264 (693)
T 3iuj_A 185 NEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVK 264 (693)
T ss_dssp TTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEE
T ss_pred CCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEE
Confidence 99999888774 39999988764 3333343 4556788999999998864332 3589999
Q ss_pred eCCCCc-eeEEeecccCCeEEEEeeCCCeEEEEeC----CCcEEEEecCCCee---eEEecCCCCeeEEEeecCCe-EEE
Q 010296 290 NAEDRA-YISTLFGHQSEVLTIDCLRKERVLTVGR----DRSMQLWKVPEESR---LVFRAPASSLECCCFISNDE-FLS 360 (513)
Q Consensus 290 d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~----d~~i~iwd~~~~~~---~~~~~~~~~v~~~~~~~~~~-~~~ 360 (513)
++.++. ....+..+.........+.++.|+..+. .+.|..+++.+... ..+..+...+. .|++++. |+.
T Consensus 265 d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~ 342 (693)
T 3iuj_A 265 DLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFA 342 (693)
T ss_dssp ETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEE
T ss_pred ECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEE
Confidence 998764 3455555666555553334556664443 36799999987654 34455555554 7777764 554
Q ss_pred -EeCCC--CEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEE
Q 010296 361 -GSDDG--SIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLA 437 (513)
Q Consensus 361 -~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 437 (513)
...++ .|++|++..+ ....+... ....+..+.++++++.|
T Consensus 343 ~~~~~g~~~l~~~d~~g~-~~~~l~~p------------------------------------~~~~~~~~~~~~d~~~l 385 (693)
T 3iuj_A 343 EYMVDATARVEQFDYEGK-RVREVALP------------------------------------GLGSVSGFNGKHDDPAL 385 (693)
T ss_dssp EEEETTEEEEEEECTTSC-EEEEECCS------------------------------------SSSEEEECCCCTTCSCE
T ss_pred EEEECCeeEEEEEECCCC-eeEEeecC------------------------------------CCceEEeeecCCCCCEE
Confidence 44454 6888888744 33443321 11236677778888766
Q ss_pred EEecCC----CcEEEEEeCCC
Q 010296 438 ASGAGN----GSVRLWAIESE 454 (513)
Q Consensus 438 ~~g~~d----g~v~vwd~~~~ 454 (513)
+....+ +.|+.||+.++
T Consensus 386 ~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 386 YFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp EEEEECSSSCCEEEEECTTTC
T ss_pred EEEecCCCCCCEEEEEECCCC
Confidence 655443 78999998765
No 218
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.48 E-value=3.9e-12 Score=120.14 Aligned_cols=253 Identities=8% Similarity=-0.006 Sum_probs=166.5
Q ss_pred CCcccchhhhhccCCCeEEEEECCCCCeEEEEe----------CCceEEEEeCCCCccccccCCChhhhccCCCCCCCCC
Q 010296 146 PEATDEFRVLLKHRQSVTAVALSEDDSKGFSAS----------KDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGR 215 (513)
Q Consensus 146 ~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (513)
....+.+..+..-..+ .++++||+++|+++. .++.|.++|..+++.+..+.-. +..
T Consensus 106 ~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~-------g~~----- 171 (426)
T 3c75_H 106 GSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELP-------DAP----- 171 (426)
T ss_dssp TTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEET-------TCC-----
T ss_pred CCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECC-------Ccc-----
Confidence 3444444444433445 899999999998876 4679999999999887655100 000
Q ss_pred CCCCcccEEEEEEcCCCCEEEEEeC--CCcEEEEeCCCcceeeeccCcCCCeEEEEEecCC-CeEEEEeCCCcEEEEeCC
Q 010296 216 ATKQSKHILALAVSSDGRYLASGGL--DRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGT-SELFSGSFDRTVKIWNAE 292 (513)
Q Consensus 216 ~~~~~~~v~~~~~s~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~ 292 (513)
..........++|+|+|++|+++.. ++.|.+.|+.+++.+..+.... . ....|++ ..+++.+.||.+.+.++.
T Consensus 172 r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~ 247 (426)
T 3c75_H 172 RFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFA 247 (426)
T ss_dssp CCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECC
T ss_pred ccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECC
Confidence 0000122346899999999999874 5789999999999988876422 1 2334433 456677778888888886
Q ss_pred CCceeEE----eecccCCe-EEEEeeCCC-eEEEEeCCCcEEEEecCCCeeeEEec-------------CCCCeeEEEee
Q 010296 293 DRAYIST----LFGHQSEV-LTIDCLRKE-RVLTVGRDRSMQLWKVPEESRLVFRA-------------PASSLECCCFI 353 (513)
Q Consensus 293 ~~~~~~~----~~~~~~~v-~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~-------------~~~~v~~~~~~ 353 (513)
+++.... +.....++ ..+.+.+++ .++.....+.|.+.|+.......... .......++++
T Consensus 248 ~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s 327 (426)
T 3c75_H 248 DGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYH 327 (426)
T ss_dssp TTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEE
T ss_pred CCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEc
Confidence 5554422 11111121 234456664 56666778899999987654321110 01122236788
Q ss_pred cCCe-EE-EEe---------CCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCc
Q 010296 354 SNDE-FL-SGS---------DDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAY 422 (513)
Q Consensus 354 ~~~~-~~-~~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 422 (513)
+++. ++ +.. ..+.|.++|+.+.+.+..+....
T Consensus 328 ~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~------------------------------------- 370 (426)
T 3c75_H 328 RQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH------------------------------------- 370 (426)
T ss_dssp GGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-------------------------------------
T ss_pred CCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-------------------------------------
Confidence 8864 33 332 13579999999999999886432
Q ss_pred ceEEEEEEecCCC-EEEEec-CCCcEEEEEeCCC
Q 010296 423 SWVSSVTVCGGSD-LAASGA-GNGSVRLWAIESE 454 (513)
Q Consensus 423 ~~i~~~~~s~~~~-~l~~g~-~dg~v~vwd~~~~ 454 (513)
....++|+|+|+ ++++.. .++.|.|+|+.+.
T Consensus 371 -~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 371 -EIDSINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp -EECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred -CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 278999999999 888887 5899999999988
No 219
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.47 E-value=2.7e-12 Score=119.26 Aligned_cols=257 Identities=7% Similarity=-0.128 Sum_probs=163.9
Q ss_pred eEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEe----------CCCcEEEEeCCC
Q 010296 182 SILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGG----------LDRHIHLWDTRI 251 (513)
Q Consensus 182 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~----------~dg~i~vwd~~~ 251 (513)
+|.++|..+++.+..+ ..+ ..+ .++++|++++++++. .++.|.+||+.+
T Consensus 47 ~vsvID~~t~~v~~~i------------------~vG-~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T 105 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHS------------------LGA-FLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT 105 (368)
T ss_dssp EEEEEETTTTEEEEEE------------------EEC-TTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT
T ss_pred eEEEEECCCCeEEEEE------------------eCC-CCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 8889999999988765 112 223 699999999988886 368899999999
Q ss_pred cceeeeccCc-------CCCeEEEEEecCCCeEEEEeC--CCcEEE--EeCCCCceeEEeecccCCeEEEEeeCC--CeE
Q 010296 252 QEHIQAFPGH-------RGPVSCLTFRQGTSELFSGSF--DRTVKI--WNAEDRAYISTLFGHQSEVLTIDCLRK--ERV 318 (513)
Q Consensus 252 ~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~~~v~~~~~~~~--~~~ 318 (513)
++.+..+..+ ......++|+|+|++|+++.. ...|.+ +|+.+ +..+.. .+. +...|+ ..+
T Consensus 106 ~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v-~~~---~~~~p~g~~~~ 178 (368)
T 1mda_H 106 FLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS-ASC---FHIHPGAAATH 178 (368)
T ss_dssp CCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC-SSC---CCCEEEETTEE
T ss_pred CCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC-CCc---eEEccCCCeEE
Confidence 9999887643 123568999999999998874 467888 99877 444431 111 112333 355
Q ss_pred EEEeCCCcEEEEecCC-----CeeeE-----EecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCe--eEEeecCCC
Q 010296 319 LTVGRDRSMQLWKVPE-----ESRLV-----FRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKP--VYIVKNAHP 386 (513)
Q Consensus 319 ~~~~~d~~i~iwd~~~-----~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~--~~~~~~~~~ 386 (513)
++.+.|+.+.+.++.+ ++... +.....+. .+...+.++..+. +.|.+.|+.+... +..+.....
T Consensus 179 ~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~ 254 (368)
T 1mda_H 179 YLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNES 254 (368)
T ss_dssp ECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCT
T ss_pred EEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccc
Confidence 6667788888888876 22211 00111222 3334455665556 9999999865432 111111000
Q ss_pred cccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecC---------CCcEEEEEeCCCCcc
Q 010296 387 LLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAG---------NGSVRLWAIESETKD 457 (513)
Q Consensus 387 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~---------dg~v~vwd~~~~~~~ 457 (513)
.. ... .........++++|+++.++++.. .+.+.++|+.+. +
T Consensus 255 ~~------------~~~---------------~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~-~- 305 (368)
T 1mda_H 255 GR------------KAD---------------NFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG-Q- 305 (368)
T ss_dssp HH------------HHT---------------TEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC-C-
T ss_pred cc------------ccc---------------ccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC-e-
Confidence 00 000 000011223689999988886543 235669999887 2
Q ss_pred eeeeeecCcccEEEEEEeecCCCEEEEEec-CCCcccccccCCCc
Q 010296 458 IQPLYNLPLVGFVNSLAFAKSGQFLIAGVG-QEPRLGRWGHLPAA 501 (513)
Q Consensus 458 ~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~-~dg~v~~W~~~~~~ 501 (513)
.+..++......+++|+|||+++++++. .++.|.++|..+..
T Consensus 306 --vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 306 --TSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp --EEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred --EEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 3333334457899999999997666657 68999999987764
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.43 E-value=1.5e-11 Score=126.17 Aligned_cols=240 Identities=17% Similarity=0.171 Sum_probs=154.5
Q ss_pred CCcccEEEEEEcCCCCEEEEEe-----CCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCc-------
Q 010296 218 KQSKHILALAVSSDGRYLASGG-----LDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRT------- 285 (513)
Q Consensus 218 ~~~~~v~~~~~s~~~~~l~s~~-----~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~------- 285 (513)
+|...+..++|||||++||.+. ....|++||+.+++.+.... +......++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 3556799999999999988543 23579999999998654311 11113567999 9999998887743
Q ss_pred ------EEEEeCCCCce----eEEeec-ccCCeEEEEeeCCCeEE--EEeC---CCcEEEEecCCC--eeeEEecCCCCe
Q 010296 286 ------VKIWNAEDRAY----ISTLFG-HQSEVLTIDCLRKERVL--TVGR---DRSMQLWKVPEE--SRLVFRAPASSL 347 (513)
Q Consensus 286 ------i~iwd~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~~--~~~~---d~~i~iwd~~~~--~~~~~~~~~~~v 347 (513)
|++|++.+... +..... +...+..+.|+|+++.+ +... ...|+++++.++ ....+..+....
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 99999987653 322233 44457889999999644 3332 258999998765 344555555555
Q ss_pred eEEEeecCCeEE-EEeC---CCCEEEEecCCCCe--eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCC
Q 010296 348 ECCCFISNDEFL-SGSD---DGSIELWSLLRKKP--VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSA 421 (513)
Q Consensus 348 ~~~~~~~~~~~~-~~~~---dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 421 (513)
.......++.|+ .... .+.|.++++.++.. ...+.....
T Consensus 284 ~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~----------------------------------- 328 (693)
T 3iuj_A 284 VSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ----------------------------------- 328 (693)
T ss_dssp EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-----------------------------------
T ss_pred EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC-----------------------------------
Confidence 554333445544 4333 36788889887654 223321111
Q ss_pred cceEEEEEEecCCCEEEEecC-CC--cEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecC---CCccccc
Q 010296 422 YSWVSSVTVCGGSDLAASGAG-NG--SVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQ---EPRLGRW 495 (513)
Q Consensus 422 ~~~i~~~~~s~~~~~l~~g~~-dg--~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~---dg~v~~W 495 (513)
.+. .|++++++|+.... +| .|++|++..+ ....+ .++..+.+..+.++|++..|+...+. -+.|..|
T Consensus 329 --~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~--~~~~l-~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~ 401 (693)
T 3iuj_A 329 --QVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK--RVREV-ALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRF 401 (693)
T ss_dssp --SCE--EEEEETTEEEEEEEETTEEEEEEECTTSC--EEEEE-CCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEE
T ss_pred --CEE--EEEEECCEEEEEEEECCeeEEEEEECCCC--eeEEe-ecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEE
Confidence 133 78898888776654 43 6888888754 22222 23455678889999998877655332 2788888
Q ss_pred ccCCCc
Q 010296 496 GHLPAA 501 (513)
Q Consensus 496 ~~~~~~ 501 (513)
++..+.
T Consensus 402 d~~~g~ 407 (693)
T 3iuj_A 402 EPKSGA 407 (693)
T ss_dssp CTTTCC
T ss_pred ECCCCe
Confidence 876553
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.40 E-value=3e-11 Score=110.82 Aligned_cols=225 Identities=11% Similarity=0.023 Sum_probs=147.0
Q ss_pred cccEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeE
Q 010296 220 SKHILALAVSSDGR-YLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYIS 298 (513)
Q Consensus 220 ~~~v~~~~~s~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 298 (513)
........|+|+++ ++++...++.|..|+. ++. +..+..+...+..++++++|+++++...++.|.+|+.. ++...
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~ 120 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHL 120 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEE
Confidence 34467899999998 5667777899999998 454 34455566789999999999866665566889999986 54322
Q ss_pred Eeecc----cCCeEEEEeeCCCeEEEE-----eC-------------CCcEEEEecCCCeeeEEecCCCCeeEEEeecCC
Q 010296 299 TLFGH----QSEVLTIDCLRKERVLTV-----GR-------------DRSMQLWKVPEESRLVFRAPASSLECCCFISND 356 (513)
Q Consensus 299 ~~~~~----~~~v~~~~~~~~~~~~~~-----~~-------------d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 356 (513)
..... ...+..+.+.++|.++.+ .. .+.|+.|+..++...... .......++|+|++
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg 199 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDE 199 (305)
T ss_dssp EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTS
T ss_pred EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCC
Confidence 21111 134678999999988763 21 256888887666554433 44566789999998
Q ss_pred e-EEEEeCC------CCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEE
Q 010296 357 E-FLSGSDD------GSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVT 429 (513)
Q Consensus 357 ~-~~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 429 (513)
. ++++... +.|.+|++.... +....... .........++
T Consensus 200 ~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~---------------------------------~~~~~~pdgi~ 245 (305)
T 3dr2_A 200 QTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFA---------------------------------SVPDGLPDGFC 245 (305)
T ss_dssp SEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEE---------------------------------CCSSSCCCSEE
T ss_pred CEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEE---------------------------------ECCCCCCCeEE
Confidence 6 5555444 689999987654 21111000 00001145688
Q ss_pred EecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCC
Q 010296 430 VCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEP 490 (513)
Q Consensus 430 ~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg 490 (513)
+.++|++.++ +.+| |.+|+... +.+..+.. ...+.+++|+|+++.|+++ +.++
T Consensus 246 ~d~~G~lwv~-~~~g-v~~~~~~g--~~~~~~~~---~~~~~~~~f~~d~~~L~it-~~~~ 298 (305)
T 3dr2_A 246 VDRGGWLWSS-SGTG-VCVFDSDG--QLLGHIPT---PGTASNCTFDQAQQRLFIT-GGPC 298 (305)
T ss_dssp ECTTSCEEEC-CSSE-EEEECTTS--CEEEEEEC---SSCCCEEEECTTSCEEEEE-ETTE
T ss_pred ECCCCCEEEe-cCCc-EEEECCCC--CEEEEEEC---CCceeEEEEeCCCCEEEEE-cCCe
Confidence 9999985554 4454 99998743 23333332 2258889999999988887 4443
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.39 E-value=3.2e-10 Score=104.93 Aligned_cols=218 Identities=8% Similarity=-0.027 Sum_probs=143.6
Q ss_pred CeEEEEECCCCC-eEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEe
Q 010296 161 SVTAVALSEDDS-KGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGG 239 (513)
Q Consensus 161 ~V~~~~~s~~~~-~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 239 (513)
-..+.+|+|++. ++++...++.|.+|+..++.... + .....+.+++|+|+|+++++.
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~--------------------~~~~~v~~i~~~~dg~l~v~~- 107 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTV-H--------------------ALPFMGSALAKISDSKQLIAS- 107 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-E--------------------ECSSCEEEEEEEETTEEEEEE-
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-E--------------------ECCCcceEEEEeCCCeEEEEE-
Confidence 356789999754 55566678899999998765432 1 123468999999999877754
Q ss_pred CCCcEEEEeCCCcceeeeccC----cCCCeEEEEEecCCCeEEEEeC------CCcEEEEeCCCCceeEEeecccCCeEE
Q 010296 240 LDRHIHLWDTRIQEHIQAFPG----HRGPVSCLTFRQGTSELFSGSF------DRTVKIWNAEDRAYISTLFGHQSEVLT 309 (513)
Q Consensus 240 ~dg~i~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~v~~ 309 (513)
.+ .|.+||..+++....... ....+..++++|+|+++++... .+.|..++ +++.. .+.........
T Consensus 108 ~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~ 183 (326)
T 2ghs_A 108 DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNS 183 (326)
T ss_dssp TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEE
T ss_pred CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCC
Confidence 34 499999988775432221 1235889999999987665432 24566666 44433 33334445788
Q ss_pred EEeeCCCe-EEEE-eCCCcEEEEecC--CC-ee----eEE--ecCCCCeeEEEeecCCeEEEEe-CCCCEEEEecCCCCe
Q 010296 310 IDCLRKER-VLTV-GRDRSMQLWKVP--EE-SR----LVF--RAPASSLECCCFISNDEFLSGS-DDGSIELWSLLRKKP 377 (513)
Q Consensus 310 ~~~~~~~~-~~~~-~~d~~i~iwd~~--~~-~~----~~~--~~~~~~v~~~~~~~~~~~~~~~-~dg~i~iwd~~~~~~ 377 (513)
++|+|++. ++.+ ..++.|.+|++. ++ .. ... ......+..+++.++|.+.++. .++.|.+|+. +++.
T Consensus 184 i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~ 262 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNH 262 (326)
T ss_dssp EEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCE
T ss_pred eEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCE
Confidence 99999985 4444 457899999985 44 21 111 1123456788899988765554 5678999998 5666
Q ss_pred eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEe-cCCCEEEEecC
Q 010296 378 VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVC-GGSDLAASGAG 442 (513)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~g~~ 442 (513)
+..+.... ..+++++|+ ++++.|++++.
T Consensus 263 ~~~i~~~~-------------------------------------~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 263 IARYEVPG-------------------------------------KQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEECSC-------------------------------------SBEEEEEEESTTSCEEEEEEB
T ss_pred EEEEECCC-------------------------------------CCcEEEEEecCCCCEEEEEec
Confidence 66654221 128999998 88876655543
No 223
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.37 E-value=4.1e-10 Score=106.65 Aligned_cols=271 Identities=12% Similarity=0.053 Sum_probs=168.4
Q ss_pred CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEE-EEEEcCCCCEEEEEeCCCcEEEEe
Q 010296 170 DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHIL-ALAVSSDGRYLASGGLDRHIHLWD 248 (513)
Q Consensus 170 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~dg~i~vwd 248 (513)
.+..|++++.++.|..||..+++.+..+....... ........+. .+.. ++..+++++.++.|..+|
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~----------~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d 119 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG----------WFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALN 119 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-------------CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccc----------cccccCcccccCceE--eCCEEEEEcCCCEEEEEE
Confidence 35678888889999999999998775441110000 0000011222 2222 356788888899999999
Q ss_pred CCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCe-----EEEEeeCCCeEEEEeC
Q 010296 249 TRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEV-----LTIDCLRKERVLTVGR 323 (513)
Q Consensus 249 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~~~~~ 323 (513)
..+++.+..+............. +..+++++.++.|..+|..+++.+.......... ..... .++.++++..
T Consensus 120 ~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~-~~~~v~~g~~ 196 (376)
T 3q7m_A 120 TSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT-AFGAAVVGGD 196 (376)
T ss_dssp TTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE-ETTEEEECCT
T ss_pred CCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE-ECCEEEEEcC
Confidence 99999876665433222222222 4578888899999999999999887765332211 11111 2677888888
Q ss_pred CCcEEEEecCCCeeeEEecCCCC-----------eeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCC
Q 010296 324 DRSMQLWKVPEESRLVFRAPASS-----------LECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLK 392 (513)
Q Consensus 324 d~~i~iwd~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 392 (513)
++.|..+|..+++.........+ +.......++.+++++.++.|..+|..+++.+.......
T Consensus 197 ~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~------- 269 (376)
T 3q7m_A 197 NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS------- 269 (376)
T ss_dssp TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC-------
T ss_pred CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC-------
Confidence 99999999988877633322110 111112235678888899999999999998876654211
Q ss_pred CcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEE
Q 010296 393 NFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNS 472 (513)
Q Consensus 393 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~ 472 (513)
...+.. ++..|++++.+|.|..+|..++...... ... ....+..
T Consensus 270 --------------------------------~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~-~~~-~~~~~~~ 313 (376)
T 3q7m_A 270 --------------------------------VNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQ-SDL-LHRLLTS 313 (376)
T ss_dssp --------------------------------EEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEE-CTT-TTSCCCC
T ss_pred --------------------------------CCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEee-ccc-CCCcccC
Confidence 333333 3557888888999999999988432221 111 1111222
Q ss_pred EEeecCCCEEEEEecCCCcccccccCCCc
Q 010296 473 LAFAKSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 473 v~~sp~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
... .+..|+++ +.+|.|.+++..++.
T Consensus 314 ~~~--~~~~l~v~-~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 314 PVL--YNGNLVVG-DSEGYLHWINVEDGR 339 (376)
T ss_dssp CEE--ETTEEEEE-CTTSEEEEEETTTCC
T ss_pred CEE--ECCEEEEE-eCCCeEEEEECCCCc
Confidence 222 24567777 678889999877664
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.36 E-value=1.2e-11 Score=115.04 Aligned_cols=267 Identities=10% Similarity=-0.013 Sum_probs=165.9
Q ss_pred cCCCcccchhhhhccCCCeEEEEECCCCCeEEEEe----------CCceEEEEeCCCCccccccCCChhhhccCCCCCCC
Q 010296 144 QKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSAS----------KDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQ 213 (513)
Q Consensus 144 ~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (513)
.+....+.+.++..-..+ .+.|+||+++|+++. .+++|.+||+.+++.+..+.-.. ..
T Consensus 51 ID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~-------~~--- 118 (368)
T 1mda_H 51 SCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPD-------AP--- 118 (368)
T ss_dssp EETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETT-------SC---
T ss_pred EECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCC-------cc---
Confidence 345555566666544556 799999999999886 37899999999999887651000 00
Q ss_pred CCCCCCcccEEEEEEcCCCCEEEEEeC--CCcEEE--EeCCCcceeeeccCcCCCeEEEEEecCCC-eEEEEeCCCcEEE
Q 010296 214 GRATKQSKHILALAVSSDGRYLASGGL--DRHIHL--WDTRIQEHIQAFPGHRGPVSCLTFRQGTS-ELFSGSFDRTVKI 288 (513)
Q Consensus 214 ~~~~~~~~~v~~~~~s~~~~~l~s~~~--dg~i~v--wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i 288 (513)
.+ ........++|+|+|++|+++.. ...|.+ +|+.+ +..+... +. +.+.|++. .+++.+.||.+.+
T Consensus 119 -~~-~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~ 189 (368)
T 1mda_H 119 -RF-SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAA 189 (368)
T ss_dssp -SC-CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTTSCEE
T ss_pred -cc-ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEE
Confidence 00 00122446899999999998875 467888 99877 3344311 11 22344443 3456667888888
Q ss_pred EeCCC-----CceeEE----eecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeeeEEec----------C---CCC
Q 010296 289 WNAED-----RAYIST----LFGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRA----------P---ASS 346 (513)
Q Consensus 289 wd~~~-----~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~----------~---~~~ 346 (513)
.++.+ ++.+.. +.....+. .+..++.++..+. +.|.+.|+.+........ . ...
T Consensus 190 vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g 265 (368)
T 1mda_H 190 SDLAAAPAAAGIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG 265 (368)
T ss_dssp EECCSSCCCCEECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECS
T ss_pred EECccccccCCeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCc
Confidence 88876 333211 11112233 2334556676666 999999986543211110 0 111
Q ss_pred eeEEEeecCCe-EEEE-e---C-----CCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCc
Q 010296 347 LECCCFISNDE-FLSG-S---D-----DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSY 416 (513)
Q Consensus 347 v~~~~~~~~~~-~~~~-~---~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 416 (513)
...+.+++++. ++++ . . .+.+.++|+.+.+.+..+....
T Consensus 266 ~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~------------------------------- 314 (368)
T 1mda_H 266 FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH------------------------------- 314 (368)
T ss_dssp SSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-------------------------------
T ss_pred ceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-------------------------------
Confidence 22367999874 4433 3 1 2356699999999888776432
Q ss_pred CCCCCcceEEEEEEecCCC-EEEEec-CCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeec
Q 010296 417 HSSSAYSWVSSVTVCGGSD-LAASGA-GNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAK 477 (513)
Q Consensus 417 ~~~~~~~~i~~~~~s~~~~-~l~~g~-~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp 477 (513)
....++|+|+|+ ++++.. .++.|.++|+.+. +.+..++.......+++.+
T Consensus 315 -------~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~----kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 315 -------DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD----QDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp -------EECEEEECCSSSCEEEEEETTTTEEEEEESSSC----EEEEECCCCSCCCEEECCC
T ss_pred -------CcceEEECCCCCEEEEEccCCCCeEEEEECCCC----cEEEEEECCCCCCEEEeec
Confidence 288999999997 456666 5899999999987 3344444444455566543
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.35 E-value=4e-10 Score=105.02 Aligned_cols=236 Identities=13% Similarity=0.058 Sum_probs=145.1
Q ss_pred CCCCEEEEE-eCCCcEEEEeCCCc----ceeeecc-------CcCCCeEEEEEecCCCeEEEEeCC------CcEEEEeC
Q 010296 230 SDGRYLASG-GLDRHIHLWDTRIQ----EHIQAFP-------GHRGPVSCLTFRQGTSELFSGSFD------RTVKIWNA 291 (513)
Q Consensus 230 ~~~~~l~s~-~~dg~i~vwd~~~~----~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~ 291 (513)
++.++|++. ..++.|+|+|+.+. +.+.++. .....-..+..+|+| .++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 777777664 46789999998765 5555552 111245667888999 66665554 78999999
Q ss_pred CCCceeEEeecccC---CeEEEEeeCCCeEEEEeC--------------------CCcEEEEecCCCeeeEEecCC---C
Q 010296 292 EDRAYISTLFGHQS---EVLTIDCLRKERVLTVGR--------------------DRSMQLWKVPEESRLVFRAPA---S 345 (513)
Q Consensus 292 ~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~--------------------d~~i~iwd~~~~~~~~~~~~~---~ 345 (513)
.+++.+.++..... ..+.+-|+|++.++..+. ..+|.+||+.+.+........ .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 99999988863322 234577899886665553 789999999987655322221 2
Q ss_pred CeeEEEe--ecCCe--EEEEe-----CCCCEEEEecCCCCe--eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCC
Q 010296 346 SLECCCF--ISNDE--FLSGS-----DDGSIELWSLLRKKP--VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPG 414 (513)
Q Consensus 346 ~v~~~~~--~~~~~--~~~~~-----~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 414 (513)
....+.| +|++. ++++- .+++|.+|....+.. ...+........ +.+...
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~-------------------~~lp~~ 312 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLE-------------------GNLPEI 312 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECC-------------------SSCCGG
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccc-------------------cccccc
Confidence 3334444 89986 44555 677888887765421 111111100000 000000
Q ss_pred CcCCCCCcceEEEEEEecCCCEEEEecC-CCcEEEEEeCCCCcceeeeeecCcc---------------cEEEEEEeecC
Q 010296 415 SYHSSSAYSWVSSVTVCGGSDLAASGAG-NGSVRLWAIESETKDIQPLYNLPLV---------------GFVNSLAFAKS 478 (513)
Q Consensus 415 ~~~~~~~~~~i~~~~~s~~~~~l~~g~~-dg~v~vwd~~~~~~~~~~~~~~~~~---------------~~v~~v~~sp~ 478 (513)
.............|.+||||++|+++.. .+.|.+||+.... ..+.+..++.. +....++++||
T Consensus 313 ~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~-~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpD 391 (462)
T 2ece_A 313 LKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPF-KPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRD 391 (462)
T ss_dssp GGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTT-SCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTT
T ss_pred ccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCC-CcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCC
Confidence 0000000123788999999999988764 5899999996432 22333322222 13588999999
Q ss_pred CCEEEEEe
Q 010296 479 GQFLIAGV 486 (513)
Q Consensus 479 ~~~l~~~~ 486 (513)
|++|+++.
T Consensus 392 Gk~LyVaN 399 (462)
T 2ece_A 392 GRRVYVTN 399 (462)
T ss_dssp SSEEEEEC
T ss_pred CCEEEEEc
Confidence 99999994
No 226
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.31 E-value=1.3e-10 Score=107.80 Aligned_cols=265 Identities=10% Similarity=0.047 Sum_probs=169.6
Q ss_pred CCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE
Q 010296 159 RQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG 238 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 238 (513)
...+.++...+++. |+.++.+ |..||. +++....+. ..........+. +..|.++
T Consensus 59 ~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~-------------------~~~~~~~~~~~~--~~~l~v~ 113 (330)
T 3hxj_A 59 EIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFD-------------------TKKAIVSDFTIF--EDILYVT 113 (330)
T ss_dssp GEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSC-------------------C-----CCEEEE--TTEEEEE
T ss_pred CCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEE-------------------CCCCcccCceEE--CCEEEEE
Confidence 34456777777765 4444444 888885 555443321 011111122233 5567788
Q ss_pred eCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeCCCeE
Q 010296 239 GLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRKERV 318 (513)
Q Consensus 239 ~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 318 (513)
+.++.|..+|.. ++....+..+...+.++...+++. |+.++.++.|..||.. ++.+..+......+.++...+++.+
T Consensus 114 t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l 190 (330)
T 3hxj_A 114 SMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTI 190 (330)
T ss_dssp CTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCE
T ss_pred ecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEE
Confidence 888999999988 777666655555566777776665 6667788999999998 7777666655566777777778888
Q ss_pred EEEeCCCcEEEEecCCCeee-EEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccC
Q 010296 319 LTVGRDRSMQLWKVPEESRL-VFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQD 397 (513)
Q Consensus 319 ~~~~~d~~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (513)
++++ +.|..|+ .++... ........+.++...+++.+.+++.++.|..++ .+++.+..+......
T Consensus 191 ~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~---------- 256 (330)
T 3hxj_A 191 YFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAIN-PDGTEKWRFKTGKRI---------- 256 (330)
T ss_dssp EEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEEC-TTSCEEEEEECSSCC----------
T ss_pred EEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEEC-CCCCEeEEeeCCCCc----------
Confidence 8777 8899999 554444 444445667788888888888898888899997 456665554422110
Q ss_pred cCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeec
Q 010296 398 EGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAK 477 (513)
Q Consensus 398 ~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp 477 (513)
+.++.+.+++ .|.+++.+|.|..+|. ++ ..+.... . ....+.++...+
T Consensus 257 ---------------------------~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g-~~~~~~~-~-~~~~~~~~~~d~ 304 (330)
T 3hxj_A 257 ---------------------------ESSPVIGNTD-TIYFGSYDGHLYAINP-DG-TEKWNFE-T-GSWIIATPVIDE 304 (330)
T ss_dssp ---------------------------CSCCEECTTS-CEEEECTTCEEEEECT-TS-CEEEEEE-C-SSCCCSCCEECT
T ss_pred ---------------------------cccceEcCCC-eEEEecCCCCEEEECC-CC-cEEEEEE-c-CCccccceEEcC
Confidence 2234445455 5666777888999985 44 2222222 1 244566777778
Q ss_pred CCCEEEEEecCCCcccccccCC
Q 010296 478 SGQFLIAGVGQEPRLGRWGHLP 499 (513)
Q Consensus 478 ~~~~l~~~~~~dg~v~~W~~~~ 499 (513)
+|.+. ++ +.+|.+.+.....
T Consensus 305 ~g~l~-~g-t~~G~~~~~~~~~ 324 (330)
T 3hxj_A 305 NGTIY-FG-TRNGKFYALFNLE 324 (330)
T ss_dssp TCCEE-EE-CTTSCEEEEEC--
T ss_pred CCEEE-EE-cCCCeEEEEeccc
Confidence 88754 45 6788887765443
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.31 E-value=2.2e-10 Score=116.76 Aligned_cols=311 Identities=10% Similarity=0.080 Sum_probs=175.0
Q ss_pred CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010296 171 DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTR 250 (513)
Q Consensus 171 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~ 250 (513)
+..|++++.++.|.-+|..+++.+..+............ ...... ..+++ .+..|++++.++.|..+|..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~-----~~~~~~---~~~~~--~~g~v~v~~~dg~l~AlDa~ 139 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEA-----CCDAVN---RGVAV--WKGKVYVGVLDGRLEAIDAK 139 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGC-----TTCSCC---CCCEE--ETTEEEEECTTSEEEEEETT
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccc-----cccCCC---CccEE--ECCEEEEEccCCEEEEEECC
Confidence 567888888999999999999988765221110000000 000000 11122 25678888899999999999
Q ss_pred CcceeeeccCc--CCCeEEEEEec---CCCeEEEEe------CCCcEEEEeCCCCceeEEeeccc---------------
Q 010296 251 IQEHIQAFPGH--RGPVSCLTFRQ---GTSELFSGS------FDRTVKIWNAEDRAYISTLFGHQ--------------- 304 (513)
Q Consensus 251 ~~~~~~~~~~~--~~~v~~~~~~~---~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~--------------- 304 (513)
+|+.+..+... ......+..+| ++ .+++++ .+|.|+.||..+++.+..+....
T Consensus 140 TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~ 218 (689)
T 1yiq_A 140 TGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIA 218 (689)
T ss_dssp TCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHH
T ss_pred CCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccc
Confidence 99988665432 11101111111 44 444443 36899999999999887764210
Q ss_pred ----------------CCeEEEEeeCC-CeEEEEeCCC-------------------cEEEEecCCCeeeE-Eec--CC-
Q 010296 305 ----------------SEVLTIDCLRK-ERVLTVGRDR-------------------SMQLWKVPEESRLV-FRA--PA- 344 (513)
Q Consensus 305 ----------------~~v~~~~~~~~-~~~~~~~~d~-------------------~i~iwd~~~~~~~~-~~~--~~- 344 (513)
.....+++.++ +.++++..++ .|..||..+++.+. +.. +.
T Consensus 219 ~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~ 298 (689)
T 1yiq_A 219 AKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDA 298 (689)
T ss_dssp HTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCC
T ss_pred ccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccc
Confidence 01124667775 4555666655 39999999988773 322 11
Q ss_pred ------CCeeEEEeecCC----eEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcc-cCcCccc----c--ccCC
Q 010296 345 ------SSLECCCFISND----EFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFE-QDEGKIS----N--GHSE 407 (513)
Q Consensus 345 ------~~v~~~~~~~~~----~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~----~--~~~~ 407 (513)
..+.......+| .++.++.+|.++++|..+++++............- +. .....+. . ....
T Consensus 299 wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~--~~~~~~~pi~~~~~~~~~~~~ 376 (689)
T 1yiq_A 299 WDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG--MDMKTGRPILDEENAAYWKNG 376 (689)
T ss_dssp SCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE--EETTTTEEEECHHHHCTTTSS
T ss_pred ccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc--cCccCCCcccchhhccccCCC
Confidence 112222222345 37788999999999999999987665433110000 00 0000000 0 0000
Q ss_pred CCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecC---------------------------------------------
Q 010296 408 NGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAG--------------------------------------------- 442 (513)
Q Consensus 408 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~--------------------------------------------- 442 (513)
...+..... .+.. .-..++|+|+..+|++...
T Consensus 377 ~~~~~~p~~--~Gg~-~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~ 453 (689)
T 1yiq_A 377 KRNLVTPAF--WGAH-DWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSW 453 (689)
T ss_dssp SCEEESSCT--TCSS-CSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTC
T ss_pred CeeEeCCCc--cccc-CCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCc
Confidence 000000000 0000 1234678887777766521
Q ss_pred CCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 443 NGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 443 dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
+|.|+.||+.+++.. ...++..++....++..+.+++++ +.||.|+.||..++..
T Consensus 454 ~g~l~A~D~~tG~~~----W~~~~~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAA----WEVPYVTIFNGGTLSTAGNLVFEG-SADGRVIAYAADTGEK 508 (689)
T ss_dssp EEEEEEEETTTTEEE----EEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCE
T ss_pred ceeEEEEECCCCCeE----eEccCCCCccCccceECCCEEEEE-CCCCcEEEEECCCCcc
Confidence 378999999998332 222233334444667788888888 8899999999887754
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.29 E-value=4.4e-10 Score=114.52 Aligned_cols=270 Identities=11% Similarity=0.150 Sum_probs=162.7
Q ss_pred CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEe------CCCc
Q 010296 170 DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGG------LDRH 243 (513)
Q Consensus 170 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~------~dg~ 243 (513)
.+..|++++.|+.|..+|..+++.+..+.... .+.........++. . ++. +++++ .+|.
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~---------~~~~~~~~~~sP~v----~-~g~-v~vg~~~~~~~~~g~ 184 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRA---------DHKRSYTITGAPRV----V-NGK-VVIGNGGAEFGVRGY 184 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCS---------CTTSCCBCCSCCEE----E-TTE-EEECCBCTTTCCBCE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcC---------CCCCCccccCCcEE----E-CCE-EEEEeCCCccCCCCE
Confidence 35678889999999999999999876542110 00000000111111 1 444 44443 3689
Q ss_pred EEEEeCCCcceeeeccCc-------------------------------CCCeEEEEEecCCCeEEEEeCCCc-------
Q 010296 244 IHLWDTRIQEHIQAFPGH-------------------------------RGPVSCLTFRQGTSELFSGSFDRT------- 285 (513)
Q Consensus 244 i~vwd~~~~~~~~~~~~~-------------------------------~~~v~~~~~~~~~~~l~~~~~dg~------- 285 (513)
|+.||..+|+.+-.+... ......++++|+..+++.++.++.
T Consensus 185 v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~ 264 (689)
T 1yiq_A 185 VTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWR 264 (689)
T ss_dssp EEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHH
T ss_pred EEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCC
Confidence 999999999987655310 011125788998889998887763
Q ss_pred ------------EEEEeCCCCceeEEeeccc---------CCeEEEEeeCCC----eEEEEeCCCcEEEEecCCCeeeEE
Q 010296 286 ------------VKIWNAEDRAYISTLFGHQ---------SEVLTIDCLRKE----RVLTVGRDRSMQLWKVPEESRLVF 340 (513)
Q Consensus 286 ------------i~iwd~~~~~~~~~~~~~~---------~~v~~~~~~~~~----~~~~~~~d~~i~iwd~~~~~~~~~ 340 (513)
|..||..+++.+..+.... .++.......++ .++.++.+|.++++|..+++.+..
T Consensus 265 ~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 344 (689)
T 1yiq_A 265 SQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSA 344 (689)
T ss_dssp HTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred CCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecc
Confidence 9999999999988775421 122222222245 356788899999999999887621
Q ss_pred ecCC----------------------------------------CCeeEEEeecCCe-EEEEeC----------------
Q 010296 341 RAPA----------------------------------------SSLECCCFISNDE-FLSGSD---------------- 363 (513)
Q Consensus 341 ~~~~----------------------------------------~~v~~~~~~~~~~-~~~~~~---------------- 363 (513)
.... ..-..++++|+.. +++...
T Consensus 345 ~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~ 424 (689)
T 1yiq_A 345 KGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRN 424 (689)
T ss_dssp EESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCC
T ss_pred ccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccccccc
Confidence 1000 0011256677653 333321
Q ss_pred -----------------------------CCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCC
Q 010296 364 -----------------------------DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPG 414 (513)
Q Consensus 364 -----------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 414 (513)
+|.|+.||+.+++.+..+....+
T Consensus 425 ~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~---------------------------- 476 (689)
T 1yiq_A 425 PFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI---------------------------- 476 (689)
T ss_dssp SCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS----------------------------
T ss_pred ccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC----------------------------
Confidence 36688888888877776654321
Q ss_pred CcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCC-EEEEEecCCCccc
Q 010296 415 SYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQ-FLIAGVGQEPRLG 493 (513)
Q Consensus 415 ~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~-~l~~~~~~dg~v~ 493 (513)
+....++..+.++++|+.||.|+.||..+++. +-.+. .+......-+.|..+|+ |+++.+|.-|.+-
T Consensus 477 ----------~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~-lw~~~-~~~~~~~~p~ty~~~G~qyv~~~~G~gg~~~ 544 (689)
T 1yiq_A 477 ----------FNGGTLSTAGNLVFEGSADGRVIAYAADTGEK-LWEQP-AASGVMAAPVTYSVDGEQYVTFMAGWGGAFS 544 (689)
T ss_dssp ----------CCCCEEEETTTEEEEECTTSEEEEEETTTCCE-EEEEE-CSSCCCSCCEEEEETTEEEEEEEECCCTTHH
T ss_pred ----------ccCccceECCCEEEEECCCCcEEEEECCCCcc-ceeee-CCCCcccCceEEEECCEEEEEEEecCCcccc
Confidence 12224455677999999999999999999833 22222 12222223366788887 5555545444443
Q ss_pred c
Q 010296 494 R 494 (513)
Q Consensus 494 ~ 494 (513)
+
T Consensus 545 ~ 545 (689)
T 1yiq_A 545 T 545 (689)
T ss_dssp H
T ss_pred c
Confidence 3
No 229
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.29 E-value=1.7e-09 Score=102.31 Aligned_cols=259 Identities=9% Similarity=0.012 Sum_probs=162.5
Q ss_pred CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 010296 170 DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWDT 249 (513)
Q Consensus 170 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~ 249 (513)
++..+++++.++.|..+|..+++.+....... .....++ .. +..+++++.++.|..+|.
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~---------------~~~~~p~----~~--~~~v~v~~~~g~l~~~d~ 160 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG---------------EALSRPV----VS--DGLVLIHTSNGQLQALNE 160 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSS---------------CCCSCCE----EE--TTEEEEECTTSEEEEEET
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC---------------ceEcCCE----EE--CCEEEEEcCCCeEEEEEC
Confidence 45678888899999999999998765431100 0011111 11 457888888999999999
Q ss_pred CCcceeeeccCcCCCe-----EEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCC----------eEEEEeeC
Q 010296 250 RIQEHIQAFPGHRGPV-----SCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSE----------VLTIDCLR 314 (513)
Q Consensus 250 ~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----------v~~~~~~~ 314 (513)
.+++.+..+....... ...... +..++.++.++.|..+|..+++.+......... +.......
T Consensus 161 ~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~ 238 (376)
T 3q7m_A 161 ADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV 238 (376)
T ss_dssp TTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE
T ss_pred CCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE
Confidence 9998877665322111 122222 456888888999999999999887766432110 11111112
Q ss_pred CCeEEEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCc
Q 010296 315 KERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNF 394 (513)
Q Consensus 315 ~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 394 (513)
++.+++++.++.+..+|..+++.+..... .....+.. .++.+++++.++.|..+|..+++.+.........
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~-~~~~~~~~-~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~------- 309 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKREL-GSVNDFIV-DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHR------- 309 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECC-CCEEEEEE-ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTS-------
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccC-CCCCCceE-ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCC-------
Confidence 67888888899999999998877644332 23334433 4667888889999999999999987665421110
Q ss_pred ccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEE
Q 010296 395 EQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLA 474 (513)
Q Consensus 395 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~ 474 (513)
.+....+. +..|++++.+|.|+++|..++.. +.... .. ...+.+..
T Consensus 310 -----------------------------~~~~~~~~--~~~l~v~~~~g~l~~~d~~tG~~-~~~~~-~~-~~~~~~~~ 355 (376)
T 3q7m_A 310 -----------------------------LLTSPVLY--NGNLVVGDSEGYLHWINVEDGRF-VAQQK-VD-SSGFQTEP 355 (376)
T ss_dssp -----------------------------CCCCCEEE--TTEEEEECTTSEEEEEETTTCCE-EEEEE-CC-TTCBCSCC
T ss_pred -----------------------------cccCCEEE--CCEEEEEeCCCeEEEEECCCCcE-EEEEe-cC-CCcceeCC
Confidence 01112222 45788888999999999998832 22221 11 12222111
Q ss_pred eecCCCEEEEEecCCCcccccc
Q 010296 475 FAKSGQFLIAGVGQEPRLGRWG 496 (513)
Q Consensus 475 ~sp~~~~l~~~~~~dg~v~~W~ 496 (513)
.. .+..|+++ +.+|.|..|+
T Consensus 356 ~~-~~~~l~v~-~~~G~l~~~~ 375 (376)
T 3q7m_A 356 VA-ADGKLLIQ-AKDGTVYSIT 375 (376)
T ss_dssp EE-ETTEEEEE-BTTSCEEEEE
T ss_pred EE-ECCEEEEE-eCCCEEEEEe
Confidence 11 24567777 7889888875
No 230
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.29 E-value=3.8e-10 Score=109.02 Aligned_cols=288 Identities=10% Similarity=0.088 Sum_probs=171.1
Q ss_pred EEEEeCCceEEEEeCCCCccccccC---C-----------Chhhh------------ccCCCCCCCCCCCCCcccEEEEE
Q 010296 174 GFSASKDGSILHWDVSSGKGVKYLW---P-----------SEEVL------------KSHGAKDPQGRATKQSKHILALA 227 (513)
Q Consensus 174 l~t~~~dg~v~iwd~~~~~~~~~~~---~-----------~~~~~------------~~~~~~~~~~~~~~~~~~v~~~~ 227 (513)
|.+|+..|.|+|+=+.+++.+..+. + +...+ ...+..... .-..|. ..+.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~-~gd~hh---~~~s 93 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHD-NGDLHH---VHMS 93 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCC-CCCBCC---EEEE
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecc-cCCCCc---cccC
Confidence 5688999999999999998877552 0 00111 111100000 011111 3344
Q ss_pred E---cCCCCEEEEEeC-CCcEEEEeCCCcceeeeccC-cCCCeEEEEE-e-cCCCeEEEEe------------------C
Q 010296 228 V---SSDGRYLASGGL-DRHIHLWDTRIQEHIQAFPG-HRGPVSCLTF-R-QGTSELFSGS------------------F 282 (513)
Q Consensus 228 ~---s~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~l~~~~------------------~ 282 (513)
+ .+||++|+.... ++.|.+.|+.+.++...+.- ....+..+++ + |++.++++++ .
T Consensus 94 ~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 94 FTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred CCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 4 237888877665 56799999999998774432 2345788888 5 9999999884 2
Q ss_pred CCcEEEEeCCCCceeEEeecccCCeEEEEeeCCCeEE-EEeCCC------------------------------------
Q 010296 283 DRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRKERVL-TVGRDR------------------------------------ 325 (513)
Q Consensus 283 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~------------------------------------ 325 (513)
++.|.++|..+.+.+.++.-.. ....++++|++.++ +++.+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred CceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 4689999999998888776322 45667788887554 444322
Q ss_pred --cEEEEecCC--Cee-eEEecCCCCeeEEEeecCCe--EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCc
Q 010296 326 --SMQLWKVPE--ESR-LVFRAPASSLECCCFISNDE--FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDE 398 (513)
Q Consensus 326 --~i~iwd~~~--~~~-~~~~~~~~~v~~~~~~~~~~--~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (513)
.|.+.|..+ +.. +....-.....++.++|+|+ ++++..+.+|.++|+.+.+... ... +....
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~--~~~---------l~~~~ 321 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVF--YEN---------ADPRS 321 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHH--HSC---------CCGGG
T ss_pred ECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccc--ccc---------cCccc
Confidence 356666665 323 22222234566789999997 4466678999999998653110 000 00000
Q ss_pred CccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC------CcceeeeeecC-cccE--
Q 010296 399 GKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE------TKDIQPLYNLP-LVGF-- 469 (513)
Q Consensus 399 ~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~------~~~~~~~~~~~-~~~~-- 469 (513)
..+.. .........++|+|+|...++.--|+.|.+|++... .+....+..++ |..+
T Consensus 322 ~v~~~---------------v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh 386 (595)
T 1fwx_A 322 AVVAE---------------PELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGH 386 (595)
T ss_dssp GEEEC---------------CBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEE
T ss_pred ceEEE---------------cCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeeccccccc
Confidence 00000 011112788999999954456668899999999762 01122222222 2111
Q ss_pred E---EEEEeecCCCEEEEEecCC-Ccc
Q 010296 470 V---NSLAFAKSGQFLIAGVGQE-PRL 492 (513)
Q Consensus 470 v---~~v~~sp~~~~l~~~~~~d-g~v 492 (513)
. .++.++|||++|+++.... .++
T Consensus 387 ~~~~~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 387 LKTVMGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp EEETTTTSTTCCSSEEEEEESCCTTSS
T ss_pred ceeccceEeCCCCCEEEEcCCCCcccc
Confidence 1 2235689999999986544 345
No 231
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.27 E-value=6.5e-10 Score=113.02 Aligned_cols=310 Identities=9% Similarity=0.025 Sum_probs=180.1
Q ss_pred CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010296 171 DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTR 250 (513)
Q Consensus 171 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~ 250 (513)
+..|++++.++.|.-+|..+++.+..+.......... . ...... ...+++ .+..|++++.++.|..+|..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~-----~-~~~~~~--~~~~a~--~~~~v~v~~~dg~l~alD~~ 146 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGF-----K-GCCDVV--NRGVAL--WKGKVYVGAWDGRLIALDAA 146 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGG-----G-SSSCSC--CCCCEE--ETTEEEEECTTSEEEEEETT
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccc-----c-ccccCC--CCCceE--ECCEEEEEcCCCEEEEEECC
Confidence 5567778888999999999999887653221100000 0 000000 011222 35678888999999999999
Q ss_pred CcceeeeccCc-C----CCeEE-EEEecCCCeEEEEeC------CCcEEEEeCCCCceeEEeecccCC------------
Q 010296 251 IQEHIQAFPGH-R----GPVSC-LTFRQGTSELFSGSF------DRTVKIWNAEDRAYISTLFGHQSE------------ 306 (513)
Q Consensus 251 ~~~~~~~~~~~-~----~~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~------------ 306 (513)
+|+.+..+..+ . ..+.+ ..+ .+..+++++. ++.|+.||..+++.+..+......
T Consensus 147 tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~ 224 (677)
T 1kb0_A 147 TGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKR 224 (677)
T ss_dssp TCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHH
T ss_pred CCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccc
Confidence 99988776644 1 11111 111 1345555543 689999999999998776532211
Q ss_pred --------------------eEEEEeeCCC-eEEEEeCCC-------------------cEEEEecCCCeeeEE-ec--C
Q 010296 307 --------------------VLTIDCLRKE-RVLTVGRDR-------------------SMQLWKVPEESRLVF-RA--P 343 (513)
Q Consensus 307 --------------------v~~~~~~~~~-~~~~~~~d~-------------------~i~iwd~~~~~~~~~-~~--~ 343 (513)
...+++.+++ .++++..++ .|..+|..+++.+.. .. +
T Consensus 225 g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~ 304 (677)
T 1kb0_A 225 AARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPG 304 (677)
T ss_dssp HHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTT
T ss_pred ccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCC
Confidence 1245677754 555555443 599999999887632 22 1
Q ss_pred C-------CCeeEEEeecCC----eEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCcccc-ccCCCCC-
Q 010296 344 A-------SSLECCCFISND----EFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISN-GHSENGN- 410 (513)
Q Consensus 344 ~-------~~v~~~~~~~~~----~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~- 410 (513)
. .....+....+| .++.++.+|.|+++|..+++++..+........ ..+......+.. .....+.
T Consensus 305 d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~--~~~d~~g~~~~~~~~~~~~~~ 382 (677)
T 1kb0_A 305 DNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWA--SGYDKHGKPIGIAAARDGSKP 382 (677)
T ss_dssp CCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE--EEECTTSCEEECGGGGCTTSC
T ss_pred cccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcc--cccCCCCceeeccccCcCCCc
Confidence 1 122223333355 377899999999999999999888764321100 000000000000 0000000
Q ss_pred -CCCCCcCCCCCcceEEEEEEecCCCEEEEecC-------------------------------------------CCcE
Q 010296 411 -LNPGSYHSSSAYSWVSSVTVCGGSDLAASGAG-------------------------------------------NGSV 446 (513)
Q Consensus 411 -~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~-------------------------------------------dg~v 446 (513)
+..... .+... -..++|+|++.++++... .|.|
T Consensus 383 ~~~~P~~--~G~~~-w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l 459 (677)
T 1kb0_A 383 QDAVPGP--YGAHN-WHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRL 459 (677)
T ss_dssp EECSSCT--TCSSC-SSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEE
T ss_pred cEECcCc--ccccC-CCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEE
Confidence 000000 11111 136788888887777533 2789
Q ss_pred EEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 447 RLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 447 ~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
..||+.+++. +...++..++....+++.+.+++++ +.||.|++||..++..
T Consensus 460 ~A~D~~tG~~----~W~~~~~~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 460 LAWDPVAQKA----AWSVEHVSPWNGGTLTTAGNVVFQG-TADGRLVAYHAATGEK 510 (677)
T ss_dssp EEEETTTTEE----EEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCE
T ss_pred EEEeCCCCcE----EeecCCCCCCcCcceEeCCCEEEEE-CCCCcEEEEECCCCce
Confidence 9999998832 3333333445556677888888888 8999999999887754
No 232
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.27 E-value=6.7e-10 Score=103.03 Aligned_cols=219 Identities=13% Similarity=0.075 Sum_probs=152.4
Q ss_pred CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010296 171 DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTR 250 (513)
Q Consensus 171 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~ 250 (513)
+..|+.++.++.|..+|.. +.....+ ..+...+.++...+++. |+.++.++.|..||..
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~-------------------~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRF-------------------KTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD 165 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEE-------------------ECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEE-------------------cCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC
Confidence 5567888888999999988 6554332 11122344556666676 6667778999999998
Q ss_pred CcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeCCCeEEEEeCCCcEEEE
Q 010296 251 IQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRKERVLTVGRDRSMQLW 330 (513)
Q Consensus 251 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iw 330 (513)
++.+..+......+.++.+.+++..+ .++ +.|..+| .+++.+..+......+.++...+++.+++++.++.|..+
T Consensus 166 -g~~~~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~ 240 (330)
T 3hxj_A 166 -GTEKWRFKTNDAITSAASIGKDGTIY-FGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAI 240 (330)
T ss_dssp -SCEEEEEECSSCCCSCCEECTTCCEE-EES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEE
T ss_pred -CCEeEEEecCCCceeeeEEcCCCEEE-EEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEE
Confidence 77776666555667777887777644 444 8899999 777777666655567888888888899999988999999
Q ss_pred ecCCCeeeEEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCC
Q 010296 331 KVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGN 410 (513)
Q Consensus 331 d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 410 (513)
+........+......+..+.+.+++.+.+++.+|.|..+|. +++.+..+.....
T Consensus 241 ~~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~------------------------ 295 (330)
T 3hxj_A 241 NPDGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNFETGSW------------------------ 295 (330)
T ss_dssp CTTSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEEEEECSSC------------------------
T ss_pred CCCCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEEEEEcCCc------------------------
Confidence 864444444444444444566667888999999999999995 6776665542211
Q ss_pred CCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 411 LNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 411 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
.+.++...+++. |..|+.+|.+++......
T Consensus 296 -------------~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 296 -------------IIATPVIDENGT-IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp -------------CCSCCEECTTCC-EEEECTTSCEEEEEC---
T ss_pred -------------cccceEEcCCCE-EEEEcCCCeEEEEecccc
Confidence 155666767775 566888999998876543
No 233
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.23 E-value=3.8e-12 Score=119.89 Aligned_cols=203 Identities=10% Similarity=0.005 Sum_probs=115.9
Q ss_pred CCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccC-CeE-
Q 010296 231 DGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQS-EVL- 308 (513)
Q Consensus 231 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~- 308 (513)
++..|++++.+|.|+.||..+|+.+..+.. +.+.+..+..++..+++++.||.|+.||..+++.+..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 477899999999999999999999888775 5555556667777888888999999999999887666543221 111
Q ss_pred EEEeeCCCeEEEEeCCCcEEEEecCCCeeeEEecCCCCeeEEEeecCC-eEEEEeCCCCEEEEecCCCCeeEEeecCCCc
Q 010296 309 TIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISND-EFLSGSDDGSIELWSLLRKKPVYIVKNAHPL 387 (513)
Q Consensus 309 ~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 387 (513)
+..+..++.+++++.++.|+.||..+++.+........ ..++|.+ .+++++.++.|+.||..+++.+..+....
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-- 160 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-- 160 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--
Confidence 11112356777888899999999998877633222221 2334444 57788999999999999998776654210
Q ss_pred ccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCC---CEEEEecCCCcEEEEEeCCCCcceeeeeec
Q 010296 388 LDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGS---DLAASGAGNGSVRLWAIESETKDIQPLYNL 464 (513)
Q Consensus 388 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~ 464 (513)
....+++++. ..+++++.+|.|+.||..++... ...
T Consensus 161 -------------------------------------~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~----W~~ 199 (369)
T 2hz6_A 161 -------------------------------------YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVL----WIQ 199 (369)
T ss_dssp -------------------------------------ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEE----EEE
T ss_pred -------------------------------------ccCccccCCccccceEEEECCCCEEEEEECCCCcEE----EEe
Confidence 1111122221 45667888999999999988332 222
Q ss_pred CcccEE-EEEEeecCCCE
Q 010296 465 PLVGFV-NSLAFAKSGQF 481 (513)
Q Consensus 465 ~~~~~v-~~v~~sp~~~~ 481 (513)
....++ ....++++|..
T Consensus 200 ~~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 200 NYASPVVAFYVWQREGLR 217 (369)
T ss_dssp ECSSCEEEEEECTTSSCE
T ss_pred cCCCceEEEEEecCCceE
Confidence 233344 34456667653
No 234
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.21 E-value=3.5e-12 Score=120.11 Aligned_cols=185 Identities=10% Similarity=0.013 Sum_probs=106.8
Q ss_pred CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 010296 170 DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWDT 249 (513)
Q Consensus 170 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~ 249 (513)
++..|++++.||.|+.||..+++.+..+.. ..+.+..+..++..+++++.+|.|+.||.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---------------------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~ 66 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE---------------------DPVLQVPTHVEEPAFLPDPNDGSLYTLGS 66 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC---------------------CCSCCCC-----CCEEECTTTCCEEEC--
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC---------------------CCceecceEcCCCEEEEeCCCCEEEEEEC
Confidence 577899999999999999999998765411 22333344556777888889999999999
Q ss_pred CCcceeeeccCcCCC-eE-EEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeC-CCeEEEEeCCCc
Q 010296 250 RIQEHIQAFPGHRGP-VS-CLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLR-KERVLTVGRDRS 326 (513)
Q Consensus 250 ~~~~~~~~~~~~~~~-v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~d~~ 326 (513)
.+++.+..+..+... +. +..+. .+..|++++.++.|+.||..+|+.+..+..+.. ..++| ++.+++++.++.
T Consensus 67 ~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p~~~~v~~~~~dg~ 141 (369)
T 2hz6_A 67 KNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSPSTSLLYLGRTEYT 141 (369)
T ss_dssp ---CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEE
T ss_pred CCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccccCCEEEEEecCCE
Confidence 998876665433211 10 00111 345677888899999999999998877764431 23344 456778888999
Q ss_pred EEEEecCCCeee-EEecCCCCeeEEEeecC----CeEEEEeCCCCEEEEecCCCCeeEEee
Q 010296 327 MQLWKVPEESRL-VFRAPASSLECCCFISN----DEFLSGSDDGSIELWSLLRKKPVYIVK 382 (513)
Q Consensus 327 i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~----~~~~~~~~dg~i~iwd~~~~~~~~~~~ 382 (513)
|+.||..+++.+ .+.... .....+..+ +.+++++.+|.|+.||..+++.+....
T Consensus 142 v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 142 ITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp EECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred EEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 999999887754 221110 111223332 568889999999999999999887765
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.21 E-value=5.9e-10 Score=107.66 Aligned_cols=186 Identities=13% Similarity=0.039 Sum_probs=135.0
Q ss_pred CCCCeEEEEeC-CceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE-c-CCCCEEEEEe------
Q 010296 169 EDDSKGFSASK-DGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV-S-SDGRYLASGG------ 239 (513)
Q Consensus 169 ~~~~~l~t~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s-~~~~~l~s~~------ 239 (513)
+||++|+.+.. ++.|.+.|+.+.+....+. ......+..+++ + |+++++++++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~------------------ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~ 160 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILE------------------IPNAKGIHGLRPQKWPRSNYVFCNGEDETPL 160 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEE------------------CSSCCSEEEEEECCSSBCSEEEEEECSCEES
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEe------------------CCCCCCCcceeeeecCCCcEEEEeccccccc
Confidence 38888887665 5679999999998766330 112234778888 5 8999998885
Q ss_pred ------------CCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCC-----------------------
Q 010296 240 ------------LDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDR----------------------- 284 (513)
Q Consensus 240 ------------~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----------------------- 284 (513)
.++.+.++|..+.+.+.++.-.. ....++++|+|+++++++.+.
T Consensus 161 ~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~ 239 (595)
T 1fwx_A 161 VNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA 239 (595)
T ss_dssp SCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH
T ss_pred CCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecc
Confidence 24579999999998887776322 456788999999998877543
Q ss_pred ---------------cEEEEeCCC--Cce-eEEeecccCCeEEEEeeCCCeEEEE--eCCCcEEEEecCCCe--------
Q 010296 285 ---------------TVKIWNAED--RAY-ISTLFGHQSEVLTIDCLRKERVLTV--GRDRSMQLWKVPEES-------- 336 (513)
Q Consensus 285 ---------------~i~iwd~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~~~~--~~d~~i~iwd~~~~~-------- 336 (513)
.|.|.|..+ ++. +..+. -.....++.++|||+++.+ ..+.+|.++|+.+..
T Consensus 240 ~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~ 318 (595)
T 1fwx_A 240 EIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENAD 318 (595)
T ss_dssp HHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCC
T ss_pred ceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccC
Confidence 477777776 444 34443 2345678899999975533 358899999998653
Q ss_pred ----eeEEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCC
Q 010296 337 ----RLVFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLR 374 (513)
Q Consensus 337 ----~~~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~ 374 (513)
.............++|+++|. +++..-+++|.+|++.+
T Consensus 319 ~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 319 PRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp GGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred cccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 223344556788999999996 45777899999999977
No 236
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.17 E-value=3.4e-09 Score=107.73 Aligned_cols=263 Identities=13% Similarity=0.148 Sum_probs=161.1
Q ss_pred CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeC------CCc
Q 010296 170 DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGL------DRH 243 (513)
Q Consensus 170 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~------dg~ 243 (513)
.+..|++++.|+.|..+|..+++.+..+..... ..........++ . .+..+++++. ++.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~---------~~~~~~~~~~p~----v--~~~~v~v~~~~~~~~~~g~ 191 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEG---------QKGSLTITGAPR----V--FKGKVIIGNGGAEYGVRGY 191 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTT---------CCSSCBCCSCCE----E--ETTEEEECCBCTTTCCBCE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcC---------cCcCcccccCcE----E--ECCEEEEEecccccCCCCE
Confidence 456788899999999999999998765411100 000000001111 1 1334555443 689
Q ss_pred EEEEeCCCcceeeeccCcCC--------------------------------CeEEEEEecCCCeEEEEeCCC-------
Q 010296 244 IHLWDTRIQEHIQAFPGHRG--------------------------------PVSCLTFRQGTSELFSGSFDR------- 284 (513)
Q Consensus 244 i~vwd~~~~~~~~~~~~~~~--------------------------------~v~~~~~~~~~~~l~~~~~dg------- 284 (513)
|+.||..+|+.+..+..... ....++++|++..|+.++.++
T Consensus 192 v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~ 271 (677)
T 1kb0_A 192 ITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKV 271 (677)
T ss_dssp EEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHH
T ss_pred EEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCC
Confidence 99999999998766543211 113578899988888887664
Q ss_pred ------------cEEEEeCCCCceeEEeeccc---------CCeEEEEeeCCC----eEEEEeCCCcEEEEecCCCeeeE
Q 010296 285 ------------TVKIWNAEDRAYISTLFGHQ---------SEVLTIDCLRKE----RVLTVGRDRSMQLWKVPEESRLV 339 (513)
Q Consensus 285 ------------~i~iwd~~~~~~~~~~~~~~---------~~v~~~~~~~~~----~~~~~~~d~~i~iwd~~~~~~~~ 339 (513)
.|..+|..+++.+..+.... .....+....+| .+++++.+|.|+++|..+++.+.
T Consensus 272 ~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~ 351 (677)
T 1kb0_A 272 RSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFIS 351 (677)
T ss_dssp HSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred CCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEec
Confidence 59999999999887765321 112222222355 35678889999999999988763
Q ss_pred Eec-CC-C----------Ce------------------------eEEEeecCCe-EEEEeC-------------------
Q 010296 340 FRA-PA-S----------SL------------------------ECCCFISNDE-FLSGSD------------------- 363 (513)
Q Consensus 340 ~~~-~~-~----------~v------------------------~~~~~~~~~~-~~~~~~------------------- 363 (513)
... .. . .+ ..++++|++. +++...
T Consensus 352 ~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~ 431 (677)
T 1kb0_A 352 AKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGP 431 (677)
T ss_dssp EEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCT
T ss_pred cccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccc
Confidence 211 10 0 00 1456777653 444332
Q ss_pred ------------------------CCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCC
Q 010296 364 ------------------------DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSS 419 (513)
Q Consensus 364 ------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 419 (513)
.|.|..||+.+++.+..+....+
T Consensus 432 ~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~--------------------------------- 478 (677)
T 1kb0_A 432 GKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSP--------------------------------- 478 (677)
T ss_dssp TSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSS---------------------------------
T ss_pred cccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCC---------------------------------
Confidence 16788888888887776653221
Q ss_pred CCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCE-EEEEec
Q 010296 420 SAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQF-LIAGVG 487 (513)
Q Consensus 420 ~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~-l~~~~~ 487 (513)
+....++..+.++++++.||.|++||+.++. .+..+.. ++.....-+.|.++|+. +++.++
T Consensus 479 -----~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~-~lw~~~~-~~~~~~~p~~y~~~G~~~v~~~~G 540 (677)
T 1kb0_A 479 -----WNGGTLTTAGNVVFQGTADGRLVAYHAATGE-KLWEAPT-GTGVVAAPSTYMVDGRQYVSVAVG 540 (677)
T ss_dssp -----CCCCEEEETTTEEEEECTTSEEEEEETTTCC-EEEEEEC-SSCCCSCCEEEEETTEEEEEEEEC
T ss_pred -----CcCcceEeCCCEEEEECCCCcEEEEECCCCc-eeeeeeC-CCCcccCCEEEEeCCEEEEEEecc
Confidence 2334456677888999999999999999983 3333321 22222234566788874 444434
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.16 E-value=8.8e-08 Score=85.71 Aligned_cols=219 Identities=10% Similarity=-0.002 Sum_probs=136.7
Q ss_pred ccEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEE-eCCCcEEEEeCCCCceeE
Q 010296 221 KHILALAVSSDGRYLASG-GLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSG-SFDRTVKIWNAEDRAYIS 298 (513)
Q Consensus 221 ~~v~~~~~s~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~ 298 (513)
..+..++|++++..|+.+ ...+.|.++++........+.........+++++++..|+.+ ...+.|.++++.......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 357899999976555544 456899999987665443333333567899999976666654 456789999987543322
Q ss_pred EeecccCCeEEEEeeC-CCeEEEEeC---CCcEEEEecCCCeeeEEe-cCCCCeeEEEeecCC-e-EEEEeCCCCEEEEe
Q 010296 299 TLFGHQSEVLTIDCLR-KERVLTVGR---DRSMQLWKVPEESRLVFR-APASSLECCCFISND-E-FLSGSDDGSIELWS 371 (513)
Q Consensus 299 ~~~~~~~~v~~~~~~~-~~~~~~~~~---d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~-~-~~~~~~dg~i~iwd 371 (513)
.+.........+++.| .+.++.+.. .+.|..+++.......+. ........+++++++ . +++-...+.|.+++
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 2222224678999999 567766554 368888887654433322 334567889999864 5 44666678999999
Q ss_pred cCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEe
Q 010296 372 LLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAI 451 (513)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~ 451 (513)
+........+... .....+++. .+.++++....+.|.+++.
T Consensus 196 ~~g~~~~~~~~~~--------------------------------------~~P~gi~~d-~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 196 PAQPGRRKVLEGL--------------------------------------QYPFAVTSY-GKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp TTEEEEEEEEECC--------------------------------------CSEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred cCCCceEEEecCC--------------------------------------CCceEEEEe-CCEEEEEECCCCeEEEEeC
Confidence 8754333222110 014456654 4445555556689999998
Q ss_pred CCCCcceeeeeecCcccEEEEEEeecCCC
Q 010296 452 ESETKDIQPLYNLPLVGFVNSLAFAKSGQ 480 (513)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~v~~v~~sp~~~ 480 (513)
.++ +.+..+.. ........+++.|++-
T Consensus 237 ~~g-~~~~~i~~-g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 237 AIS-KEMDTFHP-HKQTRLYGITIALSQC 263 (267)
T ss_dssp TTT-EEEEEECC-SSCCCCCCEEEECSCC
T ss_pred CCC-CceEEEcc-ccccccceeeecCccC
Confidence 877 33333321 1112356788888764
No 238
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.14 E-value=2.6e-07 Score=96.43 Aligned_cols=282 Identities=12% Similarity=0.135 Sum_probs=183.3
Q ss_pred eEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCC
Q 010296 162 VTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLD 241 (513)
Q Consensus 162 V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 241 (513)
|.++...+++.+.+ ++.++-|..|+..++...... ...+...|.++...+++.+.+ |+.+
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~------------------~~~~~~~i~~i~~d~~g~lwi-gt~~ 234 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVI------------------PILGTKQIQAILQQSPTRIWV-ATEG 234 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----------------------CCCEEEEEEEETTEEEE-EEBS
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEec------------------CCCCCCeeEEEEEcCCCCEEE-EECC
Confidence 88898888876444 665555888998776543211 011245688998888776544 5544
Q ss_pred CcEEEEeCCCcceeeeccC-------cCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeec-------ccCCe
Q 010296 242 RHIHLWDTRIQEHIQAFPG-------HRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFG-------HQSEV 307 (513)
Q Consensus 242 g~i~vwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------~~~~v 307 (513)
+-|.+|+..+++....... ....|.++...+++.+.+ |+.. -|.+|+..++........ ....|
T Consensus 235 ~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i 312 (795)
T 4a2l_A 235 AGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSV 312 (795)
T ss_dssp SCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCE
T ss_pred CCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcE
Confidence 4588999877654432211 235699999988876544 4444 589999887654432211 23568
Q ss_pred EEEEeeCCCeEEEEeCCCcEEEEecCCCeeeEEec-------CCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEE
Q 010296 308 LTIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRA-------PASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYI 380 (513)
Q Consensus 308 ~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~ 380 (513)
.++...+++.+.+++.++.|..|+........+.. ....|.++...++|.+.+|+.++-|..|+..+++....
T Consensus 313 ~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~ 392 (795)
T 4a2l_A 313 RSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSY 392 (795)
T ss_dssp EEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEE
T ss_pred EEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEE
Confidence 99999999999999998999999876654433321 23468889888899999999998899999877654332
Q ss_pred eecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceee
Q 010296 381 VKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQP 460 (513)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~ 460 (513)
....... . . ......|.+++..+++++|..|+.++-|.+|+..++. +..
T Consensus 393 ~~~~~~~-~-------------------~---------~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~--~~~ 441 (795)
T 4a2l_A 393 TLQEDES-A-------------------R---------GIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ--VEN 441 (795)
T ss_dssp CCC-----------------------------------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC--EEE
T ss_pred ecCCCCc-c-------------------c---------CCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc--EEE
Confidence 2110000 0 0 0011238999999998856667776679999987752 222
Q ss_pred eeec---CcccEEEEEEeecCCCEEEEEecCCCcccccccCC
Q 010296 461 LYNL---PLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLP 499 (513)
Q Consensus 461 ~~~~---~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~ 499 (513)
+... .....|.++...++|.+.+.+ . . .|.+|+...
T Consensus 442 ~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~-Gl~~~~~~~ 480 (795)
T 4a2l_A 442 FNQRNSQLVNENVYAILPDGEGNLWLGT-L-S-ALVRFNPEQ 480 (795)
T ss_dssp ECTTTSCCSCSCEEEEEECSSSCEEEEE-S-S-CEEEEETTT
T ss_pred eecCCCCcCCCeeEEEEECCCCCEEEEe-c-C-ceeEEeCCC
Confidence 2210 124579999999988876665 3 3 466776543
No 239
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.13 E-value=1.8e-09 Score=100.73 Aligned_cols=231 Identities=11% Similarity=0.040 Sum_probs=146.7
Q ss_pred ccCCCeEEEEECCCCCeEEEEeC-----CceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC
Q 010296 157 KHRQSVTAVALSEDDSKGFSASK-----DGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD 231 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~t~~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 231 (513)
.|-..+.+|+++++++++++-.. ++.|.+||+.+++.+..+.... ....+...+..++++++
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~-------------~~~~~~~~~~~v~vd~~ 130 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPP-------------PITLSNSFVNDLAVDLI 130 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCT-------------TTSCTTCCCCEEEEETT
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECCh-------------hhcccccccceEEEecC
Confidence 56778999999999886665433 5789999999888655441100 00122345688999986
Q ss_pred CCEE-EEEe---CCCcEEEEeCCCcceeeeccCcCCCeE-EEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCC
Q 010296 232 GRYL-ASGG---LDRHIHLWDTRIQEHIQAFPGHRGPVS-CLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSE 306 (513)
Q Consensus 232 ~~~l-~s~~---~dg~i~vwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 306 (513)
+..+ ++.. .++.|.+||+.+++....+.+|..... ...+.+++..+.+.+.++.+..|. ..
T Consensus 131 ~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~--------------~~ 196 (343)
T 2qe8_A 131 HNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH--------------LG 196 (343)
T ss_dssp TTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC--------------CC
T ss_pred CCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceecee--------------cc
Confidence 5444 5544 578999999998887777765432111 144556777777777788776553 23
Q ss_pred eEEEEeeCCCe-EEEEeCCC-cEEEEecC---CCe--------eeEEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEec
Q 010296 307 VLTIDCLRKER-VLTVGRDR-SMQLWKVP---EES--------RLVFRAPASSLECCCFISNDE-FLSGSDDGSIELWSL 372 (513)
Q Consensus 307 v~~~~~~~~~~-~~~~~~d~-~i~iwd~~---~~~--------~~~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~ 372 (513)
+..|+++|++. ++++...+ .|..++.. ... .+....+......+++.++|. +++...++.|.+|+.
T Consensus 197 ~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 197 VNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp EEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred cceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 57899999985 55655544 55555432 110 011122233556789999987 456667889999998
Q ss_pred CCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEE
Q 010296 373 LRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWA 450 (513)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd 450 (513)
.+++........ ...++++++|.+++.++++.+..+.+.+|.
T Consensus 277 ~~G~~~~~~~~~------------------------------------~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 277 ADRAYKLLVTDE------------------------------------KLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp TTTEEEEEEECG------------------------------------GGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred CCCCEEEEEECC------------------------------------ceecCCeeEECCCCcEEEEeCccccccccc
Confidence 556533222210 112388999999998888877655554443
No 240
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.11 E-value=5e-07 Score=94.30 Aligned_cols=284 Identities=7% Similarity=0.037 Sum_probs=184.7
Q ss_pred CCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE
Q 010296 159 RQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG 238 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 238 (513)
...|.+|...++|. |..|+.++-|.+|+..+....... ... . ...-....|.++...++|. |..|
T Consensus 309 ~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~-~~~-----------~-~~~l~~~~V~~i~~d~~g~-lWiG 373 (795)
T 4a2l_A 309 QRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIR-NIP-----------Y-KNSLSDNVVSCIVEDKDKN-LWIG 373 (795)
T ss_dssp SSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEEC-CCT-----------T-SSSCSCSSEEEEEECTTSC-EEEE
T ss_pred CCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEc-CCC-----------C-CCCCCCCeeEEEEECCCCC-EEEE
Confidence 35799999998887 556777777888886554322111 000 0 0011245699999998886 5567
Q ss_pred eCCCcEEEEeCCCcceeeeccC--------cCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEee----cccCC
Q 010296 239 GLDRHIHLWDTRIQEHIQAFPG--------HRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLF----GHQSE 306 (513)
Q Consensus 239 ~~dg~i~vwd~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~ 306 (513)
+.++-|..|+..++........ ....|.+++..+++..|..|+.++.|.+|+..+++...... .....
T Consensus 374 t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~ 453 (795)
T 4a2l_A 374 TNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNEN 453 (795)
T ss_dssp ESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSC
T ss_pred ECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCe
Confidence 7777799999887654432211 23579999998888757778887889999998876443221 13457
Q ss_pred eEEEEeeCCCeEEEEeCCCcEEEEecCCCeeeEEec-------CCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeE
Q 010296 307 VLTIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRA-------PASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVY 379 (513)
Q Consensus 307 v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~ 379 (513)
|.++...+++.+..++. +.|.+|+..++....+.. ....|.++...++|.+..|+. +-|.+|+..+++.
T Consensus 454 v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~-- 529 (795)
T 4a2l_A 454 VYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI-- 529 (795)
T ss_dssp EEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE--
T ss_pred eEEEEECCCCCEEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE--
Confidence 88998888899888887 568999988766544322 235688888889998888877 5688999877654
Q ss_pred EeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCccee
Q 010296 380 IVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQ 459 (513)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~ 459 (513)
.+....... ......|.++...++|.+.++.. . -|..|+..+. .+.
T Consensus 530 ~~~~~~~~~------------------------------~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~--~~~ 575 (795)
T 4a2l_A 530 QKASILPVS------------------------------NVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDK--QIK 575 (795)
T ss_dssp EECCCSCSC------------------------------GGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTT--EEE
T ss_pred EEecCCCCC------------------------------CCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCC--cEE
Confidence 222100000 11123389999999988666544 3 4788887665 222
Q ss_pred eeeecC--cccEEEEEEeecCCCEEEEEecCCCcccccccC
Q 010296 460 PLYNLP--LVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHL 498 (513)
Q Consensus 460 ~~~~~~--~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~ 498 (513)
.+.... ....|.++...++|.+.+++ .. .|..|+..
T Consensus 576 ~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~-Gl~~~~~~ 613 (795)
T 4a2l_A 576 RYNTTNGLPNNVVYGILEDSFGRLWLST--NR-GISCFNPE 613 (795)
T ss_dssp EECGGGTCSCSCEEEEEECTTSCEEEEE--TT-EEEEEETT
T ss_pred EeCCCCCCchhheEEEEECCCCCEEEEc--CC-ceEEEcCC
Confidence 222111 23468899999999877666 23 45556543
No 241
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.11 E-value=3.1e-08 Score=92.41 Aligned_cols=191 Identities=12% Similarity=0.075 Sum_probs=127.5
Q ss_pred cCCCeEE-EEeCCCcEEEEeCCCC----ceeEEee------c-ccCCeEEEEeeCCCeEEEEeCC------CcEEEEecC
Q 010296 272 QGTSELF-SGSFDRTVKIWNAEDR----AYISTLF------G-HQSEVLTIDCLRKERVLTVGRD------RSMQLWKVP 333 (513)
Q Consensus 272 ~~~~~l~-~~~~dg~i~iwd~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~~~~~~~d------~~i~iwd~~ 333 (513)
++.++|+ ++..++.|+++|+.+. +.+.++. . .......+.+.|++.++++..+ +.|.++|..
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECC
Confidence 7777776 4566889999999754 4455552 1 1124466788899955544444 789999999
Q ss_pred CCeeeEEecCC----CCeeEEEeecCCeEEEEe--------------------CCCCEEEEecCCCCeeEEeecCCCccc
Q 010296 334 EESRLVFRAPA----SSLECCCFISNDEFLSGS--------------------DDGSIELWSLLRKKPVYIVKNAHPLLD 389 (513)
Q Consensus 334 ~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~--------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~ 389 (513)
+...+...... .-...+.|+|++.++..+ ...+|.+||+.+++.+.++.....
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~--- 249 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE--- 249 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT---
T ss_pred CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC---
Confidence 88877443221 223347789988644333 378999999999888887764311
Q ss_pred CCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEE--ecCCCEEEEecC------CCcEEEEEeCCCCcceeee
Q 010296 390 GLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTV--CGGSDLAASGAG------NGSVRLWAIESETKDIQPL 461 (513)
Q Consensus 390 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~g~~------dg~v~vwd~~~~~~~~~~~ 461 (513)
......+.| +|+++++++++. +++|.+|....+. +...
T Consensus 250 --------------------------------g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~--~~~~ 295 (462)
T 2ece_A 250 --------------------------------NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK--WNAE 295 (462)
T ss_dssp --------------------------------EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE--EEEE
T ss_pred --------------------------------CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc--eeEE
Confidence 111445555 999998888774 5688887765431 1111
Q ss_pred ee--cCc-----------------ccEEEEEEeecCCCEEEEEecCCCcccccccCC
Q 010296 462 YN--LPL-----------------VGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLP 499 (513)
Q Consensus 462 ~~--~~~-----------------~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~ 499 (513)
.. ++. ...+..|.+||||++|.++.-..+.|.++++..
T Consensus 296 ~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 296 KVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp EEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred EEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 11 000 234788999999999999988889999999863
No 242
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.08 E-value=6e-08 Score=85.01 Aligned_cols=209 Identities=9% Similarity=-0.034 Sum_probs=136.2
Q ss_pred ceeeeccCcCC--CeEEEEEecCCCeEEEEeC--CCcEEEEeCCCCceeEEeecccC-CeEEEEeeCCCeEE-EEeCCCc
Q 010296 253 EHIQAFPGHRG--PVSCLTFRQGTSELFSGSF--DRTVKIWNAEDRAYISTLFGHQS-EVLTIDCLRKERVL-TVGRDRS 326 (513)
Q Consensus 253 ~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~-~~~~d~~ 326 (513)
+.+.++. |.. ....+.|++++.++++.+. ++.|+++|+.+++.+..+.-... ....+++.. ++++ +.-.++.
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~ 87 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSE
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCE
Confidence 4555664 443 3589999998643444433 57999999999998887653222 233555553 4555 4446899
Q ss_pred EEEEecCCCeeeEEecCC-CCeeEEEeecCC-eEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccc
Q 010296 327 MQLWKVPEESRLVFRAPA-SSLECCCFISND-EFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNG 404 (513)
Q Consensus 327 i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~-~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 404 (513)
+.++|..+.+.+...... ..- ..+++++ +++++..++.|.++|..+.+.+..+......
T Consensus 88 v~viD~~t~~v~~~i~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~----------------- 148 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNG----------------- 148 (266)
T ss_dssp EEEEETTTTEEEEEEECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETT-----------------
T ss_pred EEEEECCCCcEEEEEECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCC-----------------
Confidence 999999988776433222 222 3344555 4555557889999999999988887643210
Q ss_pred cCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeec-----------CcccEEEEE
Q 010296 405 HSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNL-----------PLVGFVNSL 473 (513)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~-----------~~~~~v~~v 473 (513)
.....++.+.|. +|.+.+....++.|.+.|..++ +.+..+... +.....+.|
T Consensus 149 ---------------~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg-~V~~~I~~~g~~~~~~~~~~~~~~v~nGI 211 (266)
T 2iwa_A 149 ---------------HRVIRLNELEYI-NGEVWANIWQTDCIARISAKDG-TLLGWILLPNLRKKLIDEGFRDIDVLNGI 211 (266)
T ss_dssp ---------------EECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTC-CEEEEEECHHHHHHHHHTTCTTCCCEEEE
T ss_pred ---------------cccccceeEEEE-CCEEEEecCCCCeEEEEECCCC-cEEEEEECCCcccccccccccccCceEEE
Confidence 000116678887 6766665556789999999988 333333211 011357899
Q ss_pred EeecCCCEEEEEecCCCcccccccCC
Q 010296 474 AFAKSGQFLIAGVGQEPRLGRWGHLP 499 (513)
Q Consensus 474 ~~sp~~~~l~~~~~~dg~v~~W~~~~ 499 (513)
+|+|+++.|++++...++|..-++.+
T Consensus 212 a~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 212 AWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEcCCCCEEEEECCCCCeEEEEEEec
Confidence 99999998888867777777666544
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.07 E-value=3.5e-07 Score=81.72 Aligned_cols=203 Identities=8% Similarity=-0.013 Sum_probs=132.5
Q ss_pred CCeEEEEECCCCCeEEE-EeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEE-
Q 010296 160 QSVTAVALSEDDSKGFS-ASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLAS- 237 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~t-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s- 237 (513)
..+.+++|++++..|+. -...+.|.++++.+......+ .........+++++++..|+.
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-------------------~~~~~~p~~ia~d~~~~~lyv~ 96 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII-------------------RQDLGSPEGIALDHLGRTIFWT 96 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE-------------------CTTCCCEEEEEEETTTTEEEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE-------------------ECCCCCccEEEEEecCCeEEEE
Confidence 45789999997666664 455789999998765432211 111235789999997655554
Q ss_pred EeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeC---CCcEEEEeCCCCceeEEe-ecccCCeEEEEee
Q 010296 238 GGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSF---DRTVKIWNAEDRAYISTL-FGHQSEVLTIDCL 313 (513)
Q Consensus 238 ~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~ 313 (513)
-...+.|.++++........+.........++++|++..|+.+.. .+.|..+++.... ...+ .........+++.
T Consensus 97 d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d 175 (267)
T 1npe_A 97 DSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFD 175 (267)
T ss_dssp ETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEE
T ss_pred ECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEc
Confidence 445688999998654322222222246789999997777665554 3688888876433 2222 2233457889999
Q ss_pred CC-CeEEEEe-CCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EEEEeCCCCEEEEecCCCCeeEEeec
Q 010296 314 RK-ERVLTVG-RDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FLSGSDDGSIELWSLLRKKPVYIVKN 383 (513)
Q Consensus 314 ~~-~~~~~~~-~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~~~~~~~~~~ 383 (513)
++ +.++.+. ..+.|.++++.......+.........+++. .+. +++....+.|.+++..+++.+..+..
T Consensus 176 ~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 176 AFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECC
T ss_pred CCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEcc
Confidence 86 4665444 5688999999765444333333445667665 455 44555678999999999988888753
No 244
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.06 E-value=6.4e-08 Score=84.83 Aligned_cols=192 Identities=11% Similarity=0.024 Sum_probs=135.2
Q ss_pred CeEEEEECCCCCeEEEEeC--CceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE
Q 010296 161 SVTAVALSEDDSKGFSASK--DGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG 238 (513)
Q Consensus 161 ~V~~~~~s~~~~~l~t~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 238 (513)
....+.|+|++.++++.+. ++.|.++|+.+++.+..+. +..+ .....+++. +..|+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-----------------l~~~-~fgeGi~~~--g~~lyv~ 81 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK-----------------MDDS-YFGEGLTLL--NEKLYQV 81 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE-----------------CCTT-CCEEEEEEE--TTEEEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe-----------------cCCC-cceEEEEEe--CCEEEEE
Confidence 3689999998754445443 5899999999999887651 0111 112345555 4455554
Q ss_pred e-CCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeeccc-----CCeEEEEe
Q 010296 239 G-LDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQ-----SEVLTIDC 312 (513)
Q Consensus 239 ~-~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~ 312 (513)
. .++.+.++|..+.+.+.++..... ....++++++.|+++..++.|.++|..+.+.+..+.-.. ..++.+.|
T Consensus 82 t~~~~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~ 159 (266)
T 2iwa_A 82 VWLKNIGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEY 159 (266)
T ss_dssp ETTCSEEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred EecCCEEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEE
Confidence 4 578999999999999888863311 124466788888877778999999999988877765322 13667888
Q ss_pred eCCCeEEEEe-CCCcEEEEecCCCeeeEEecC--------------CCCeeEEEeecCCe--EEEEeCCCCEEEEecCCC
Q 010296 313 LRKERVLTVG-RDRSMQLWKVPEESRLVFRAP--------------ASSLECCCFISNDE--FLSGSDDGSIELWSLLRK 375 (513)
Q Consensus 313 ~~~~~~~~~~-~d~~i~iwd~~~~~~~~~~~~--------------~~~v~~~~~~~~~~--~~~~~~dg~i~iwd~~~~ 375 (513)
. ++.+++.. .++.|.+.|..+++....... ......++++|++. |+++...+.|.+.++...
T Consensus 160 ~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 160 I-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp E-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred E-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 7 67777555 578999999999887632211 13567999999874 667878899998887654
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.02 E-value=6.4e-08 Score=98.32 Aligned_cols=312 Identities=10% Similarity=0.077 Sum_probs=171.0
Q ss_pred CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010296 171 DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTR 250 (513)
Q Consensus 171 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~ 250 (513)
+..|++++.++.|.-+|..+++.+..+............ ...... ..+++ .+..|++++.++.|..+|..
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~-----~~~~~~---~~~~~--~~~~v~v~~~dg~l~alD~~ 135 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTS-----CCDAVN---RGVAL--WGDKVYVGTLDGRLIALDAK 135 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGC-----TTCSCC---CCCEE--EBTEEEEECTTSEEEEEETT
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccc-----cccCCc---cceEE--ECCEEEEEcCCCEEEEEECC
Confidence 556778888999999999999988765322111000000 000000 11222 25578888889999999999
Q ss_pred CcceeeeccCcC----CCeEE-EEEecCCCeEEEEeC------CCcEEEEeCCCCceeEEeecccC--------------
Q 010296 251 IQEHIQAFPGHR----GPVSC-LTFRQGTSELFSGSF------DRTVKIWNAEDRAYISTLFGHQS-------------- 305 (513)
Q Consensus 251 ~~~~~~~~~~~~----~~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~-------------- 305 (513)
+|+.+..+.... ..+.+ ..+. + ..++++.. +|.|+.+|..+++.+..+.....
T Consensus 136 tG~~~W~~~~~~~~~~~~~~~~P~v~-~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~ 213 (668)
T 1kv9_A 136 TGKAIWSQQTTDPAKPYSITGAPRVV-K-GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREA 213 (668)
T ss_dssp TCCEEEEEECSCTTSSCBCCSCCEEE-T-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHH
T ss_pred CCCEeeeeccCCCCCcceecCCCEEE-C-CEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccc
Confidence 999886665321 11111 1111 3 34555543 58999999999999887642110
Q ss_pred -----------------CeEEEEeeCC-CeEEEEeCCC-------------------cEEEEecCCCeeeE-Eec--CC-
Q 010296 306 -----------------EVLTIDCLRK-ERVLTVGRDR-------------------SMQLWKVPEESRLV-FRA--PA- 344 (513)
Q Consensus 306 -----------------~v~~~~~~~~-~~~~~~~~d~-------------------~i~iwd~~~~~~~~-~~~--~~- 344 (513)
....+++.+. +.++++..++ .|..+|..+++.+. +.. +.
T Consensus 214 ~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~ 293 (668)
T 1kv9_A 214 AKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDS 293 (668)
T ss_dssp HTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC
T ss_pred cccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcc
Confidence 0123566664 4555666555 49999999988773 222 11
Q ss_pred ------CCeeEEEeecCCe----EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCccc-CcCccccccCC-CCCCC
Q 010296 345 ------SSLECCCFISNDE----FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQ-DEGKISNGHSE-NGNLN 412 (513)
Q Consensus 345 ------~~v~~~~~~~~~~----~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~-~~~~~ 412 (513)
.+.....+..++. ++.++.+|.++++|..+++.+............ .+.. ....+...... .+. .
T Consensus 294 wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~--~~d~~~g~p~~~~~~~~~~~-~ 370 (668)
T 1kv9_A 294 WDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAE--KVDLATGRPVEAPGVRYEKE-P 370 (668)
T ss_dssp SCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEE--EECTTTCCEEECTTTTCSSS-C
T ss_pred ccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccc--ccccccCCccccccccccCC-e
Confidence 2222223334553 778999999999999999998766543210000 0000 00000000000 000 0
Q ss_pred CCCcCCCCCcceEEEEEEecCCCEEEE------------------------------------ecCCCcEEEEEeCCCCc
Q 010296 413 PGSYHSSSAYSWVSSVTVCGGSDLAAS------------------------------------GAGNGSVRLWAIESETK 456 (513)
Q Consensus 413 ~~~~~~~~~~~~i~~~~~s~~~~~l~~------------------------------------g~~dg~v~vwd~~~~~~ 456 (513)
...+........-..++++|+..++++ ...+|.|..||+.+++.
T Consensus 371 ~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~ 450 (668)
T 1kv9_A 371 IVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKA 450 (668)
T ss_dssp EEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEE
T ss_pred eEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcE
Confidence 000000000000123556665555443 12348899999999833
Q ss_pred ceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCCcc
Q 010296 457 DIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAAR 502 (513)
Q Consensus 457 ~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~~ 502 (513)
..+. +...++....+...+.+++++ +.||.|+.||...+..
T Consensus 451 ~W~~----~~~~~~~~~~~~t~gg~vf~g-~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 451 AWKV----PYPTHWNGGTLSTAGNLVFQG-TAAGQMHAYSADKGEA 491 (668)
T ss_dssp EEEE----EESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCE
T ss_pred EEEc----cCCCCCcCceeEeCCCEEEEE-CCcccchhhhhhcChh
Confidence 2222 222233334556678888888 8899999999877654
No 246
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.01 E-value=1.8e-06 Score=90.00 Aligned_cols=295 Identities=11% Similarity=0.034 Sum_probs=182.3
Q ss_pred CCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE
Q 010296 159 RQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG 238 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 238 (513)
...|.+|...++|. |..|+..+-|.+++..+.............+. .+..........|.+|...++|. |..|
T Consensus 257 ~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~-----~~~~~~~l~~~~v~~i~~D~~g~-lWig 329 (781)
T 3v9f_A 257 SSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIR-----EGDNNYSLSNASARYIFQDSFNN-IWIG 329 (781)
T ss_dssp CCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEEC-----BCSSTTSBSSSCEEEEEECSSCC-EEEE
T ss_pred CceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeecccccccc-----CCCCCCCCCCCeEEEEEEeCCCC-EEEE
Confidence 45699999988876 55566645678889876653321100000000 00000122356799999998886 5667
Q ss_pred eCCCcEEEEeCCCcceeeec---------cCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEe---ecccCC
Q 010296 239 GLDRHIHLWDTRIQEHIQAF---------PGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTL---FGHQSE 306 (513)
Q Consensus 239 ~~dg~i~vwd~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~ 306 (513)
+.++-|..|+..+....... ......|.++...+++. |..|+.++-|.+|+..++...... ......
T Consensus 330 t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 408 (781)
T 3v9f_A 330 TWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNS 408 (781)
T ss_dssp EBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSB
T ss_pred ecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcc
Confidence 76777899987755432211 11235689998887765 556666677999998765432211 123456
Q ss_pred eEEEEeeCCCeEEEEeCCCcEEEEecCCCeeeEEec---CCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeec
Q 010296 307 VLTIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRA---PASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKN 383 (513)
Q Consensus 307 v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~ 383 (513)
|.++...+++.+.+++.++.|..++..++....+.. ....|.++...+++.+..|+. +-|.+|+..+++.......
T Consensus 409 v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~ 487 (781)
T 3v9f_A 409 VLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDT 487 (781)
T ss_dssp EEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECT
T ss_pred eEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccC
Confidence 889988888999999888889999988776554432 346788888888898888887 5688999877654332211
Q ss_pred CCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeee
Q 010296 384 AHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYN 463 (513)
Q Consensus 384 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~ 463 (513)
... ......|.++...++|.+.+.....| |..|+..+. .+..+..
T Consensus 488 ~~~--------------------------------~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~--~~~~~~~ 532 (781)
T 3v9f_A 488 SNS--------------------------------QLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQ--LVRKFNQ 532 (781)
T ss_dssp TTS--------------------------------SCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCC--EEEEECT
T ss_pred ccc--------------------------------ccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCC--eEEEccC
Confidence 100 00113389999999887666544355 777876654 2222221
Q ss_pred c--CcccEEEEEEeecCCCEEEEEecCCCcccccccCC
Q 010296 464 L--PLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLP 499 (513)
Q Consensus 464 ~--~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~ 499 (513)
. .....|.++...++|.+.+++ . .|.|..|+...
T Consensus 533 ~~~l~~~~i~~i~~d~~g~lWi~T-~-~Glv~~~d~~~ 568 (781)
T 3v9f_A 533 YEGFCSNTINQIYRSSKGQMWLAT-G-EGLVCFPSARN 568 (781)
T ss_dssp TTTCSCSCEEEEEECTTSCEEEEE-T-TEEEEESCTTT
T ss_pred CCCCCCCeeEEEEECCCCCEEEEE-C-CCceEEECCCC
Confidence 1 124578999999999876665 3 55547776544
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.97 E-value=8.1e-08 Score=97.57 Aligned_cols=152 Identities=8% Similarity=0.096 Sum_probs=98.3
Q ss_pred CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeC------CCcE
Q 010296 171 DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGL------DRHI 244 (513)
Q Consensus 171 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~------dg~i 244 (513)
+..|++++.|+.|..+|..+++.+..+..... .........++. . ++ .++++.. +|.|
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~----------~~~~~~~~~P~v----~-~~-~v~vg~~~~~~~~~g~v 180 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDP----------AKPYSITGAPRV----V-KG-KVIIGNGGAEYGVRGFV 180 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCT----------TSSCBCCSCCEE----E-TT-EEEECCBCTTTCCBCEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCC----------CCcceecCCCEE----E-CC-EEEEeCCCCCcCCCCEE
Confidence 46788889999999999999998765411100 000001111111 1 34 4444432 5899
Q ss_pred EEEeCCCcceeeeccCc-------------------------------CCCeEEEEEecCCCeEEEEeCCC---------
Q 010296 245 HLWDTRIQEHIQAFPGH-------------------------------RGPVSCLTFRQGTSELFSGSFDR--------- 284 (513)
Q Consensus 245 ~vwd~~~~~~~~~~~~~-------------------------------~~~v~~~~~~~~~~~l~~~~~dg--------- 284 (513)
+.+|..+|+.+..+... ......+++.|....++.++.++
T Consensus 181 ~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~ 260 (668)
T 1kv9_A 181 SAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRS 260 (668)
T ss_dssp EEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHS
T ss_pred EEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCC
Confidence 99999999987665421 00112468888888888887766
Q ss_pred ----------cEEEEeCCCCceeEEeecc--c-------CCeEEEEeeCCCe----EEEEeCCCcEEEEecCCCeee
Q 010296 285 ----------TVKIWNAEDRAYISTLFGH--Q-------SEVLTIDCLRKER----VLTVGRDRSMQLWKVPEESRL 338 (513)
Q Consensus 285 ----------~i~iwd~~~~~~~~~~~~~--~-------~~v~~~~~~~~~~----~~~~~~d~~i~iwd~~~~~~~ 338 (513)
.|..+|..+++.+..+... . .++....+..++. ++.++.+|.++++|..+++.+
T Consensus 261 ~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 261 PGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp TTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred CCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 3999999999998877532 1 2222223333553 668889999999999988766
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.97 E-value=6.4e-07 Score=82.50 Aligned_cols=255 Identities=9% Similarity=0.031 Sum_probs=148.7
Q ss_pred CCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChh-h-hccCCCCCCCCCCCCCcccEEEEEEcC-CCCEEE
Q 010296 160 QSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEE-V-LKSHGAKDPQGRATKQSKHILALAVSS-DGRYLA 236 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~ 236 (513)
....+++|++++++++++..++.|..|+..++........... . ....+.. ..........+..|++.+ +++ |+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~p~gi~~~~~~g~-l~ 95 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENST--DAEKRPLCGRTYDISYNLQNNQ-LY 95 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCC--CGGGHHHHCCEEEEEEETTTTE-EE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEeccccccccccccccc--chhccccCCCCceEEEcCCCCc-EE
Confidence 3467789999999888898999999999876543211100000 0 0000000 000001123578999998 555 55
Q ss_pred EEeCCCcEEEEeCCCcceeeec---cC-cCCCeEEEEEec-CCCeEEEEeC-----------------CCcEEEEeCCCC
Q 010296 237 SGGLDRHIHLWDTRIQEHIQAF---PG-HRGPVSCLTFRQ-GTSELFSGSF-----------------DRTVKIWNAEDR 294 (513)
Q Consensus 237 s~~~dg~i~vwd~~~~~~~~~~---~~-~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~iwd~~~~ 294 (513)
++...+.|.+++..++...... .+ .......+++.+ +|+..++-.. .+.|..||..++
T Consensus 96 v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 96 IVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp EEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred EEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 5544555888987765432111 11 123578899999 8876665432 367889998776
Q ss_pred ceeEEeecccCCeEEEEeeCCCe-EEEE-eCCCcEEEEecCCC---eeeEEecCCCCeeEEEeecCCeEEEEeC------
Q 010296 295 AYISTLFGHQSEVLTIDCLRKER-VLTV-GRDRSMQLWKVPEE---SRLVFRAPASSLECCCFISNDEFLSGSD------ 363 (513)
Q Consensus 295 ~~~~~~~~~~~~v~~~~~~~~~~-~~~~-~~d~~i~iwd~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~------ 363 (513)
+...... .......+++++++. ++++ ...+.|.+|++... ....+..... ...+++.++|.+.++..
T Consensus 176 ~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 176 ETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGN 253 (322)
T ss_dssp EEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred EEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCccccc
Confidence 5433222 233456799999875 5554 45688999998752 2222222223 77889999987554443
Q ss_pred -----CCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEE
Q 010296 364 -----DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAA 438 (513)
Q Consensus 364 -----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 438 (513)
.+.|..++. .++.+..+...... ....++++++ .++++++
T Consensus 254 ~~~~~~~~v~~~d~-~G~~~~~~~~~~g~---------------------------------~~~~~~~~~~-~~g~L~v 298 (322)
T 2fp8_A 254 MHGRVDPKGIKFDE-FGNILEVIPLPPPF---------------------------------AGEHFEQIQE-HDGLLYI 298 (322)
T ss_dssp TTSCEEEEEEEECT-TSCEEEEEECCTTT---------------------------------TTSCCCEEEE-ETTEEEE
T ss_pred ccCCCccEEEEECC-CCCEEEEEECCCCC---------------------------------ccccceEEEE-eCCEEEE
Confidence 356788876 46666655432110 0112566666 4666666
Q ss_pred EecCCCcEEEEEeCCC
Q 010296 439 SGAGNGSVRLWAIESE 454 (513)
Q Consensus 439 ~g~~dg~v~vwd~~~~ 454 (513)
+....+.|.++++...
T Consensus 299 ~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 299 GTLFHGSVGILVYDKK 314 (322)
T ss_dssp ECSSCSEEEEEEC---
T ss_pred eecCCCceEEEecccc
Confidence 6667888999988654
No 249
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.94 E-value=2.1e-06 Score=89.47 Aligned_cols=285 Identities=9% Similarity=0.066 Sum_probs=180.0
Q ss_pred CCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE
Q 010296 159 RQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG 238 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 238 (513)
...|.+|...++|. |..|+.++-|..|+..+........... ... ........|.++...++|. |..|
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~--------~~~--~~~l~~~~v~~i~~d~~g~-lWig 379 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPT--------QMN--ESSLSNKVVSSVCDDGQGK-LWIG 379 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC------------CCC--SSCCSSSCEEEEEECTTSC-EEEE
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCcc--------ccc--cCCCCCcceEEEEEcCCCC-EEEE
Confidence 46799999999886 6667767778888877654332110000 000 0011245699999988776 4566
Q ss_pred eCCCcEEEEeCCCcceeeec---cCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEee--cccCCeEEEEee
Q 010296 239 GLDRHIHLWDTRIQEHIQAF---PGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLF--GHQSEVLTIDCL 313 (513)
Q Consensus 239 ~~dg~i~vwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~ 313 (513)
+.++-|.+|+..++...... ......|.++...+++. |..|+.++.|..++..+++...... .....|.++...
T Consensus 380 t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d 458 (781)
T 3v9f_A 380 TDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYED 458 (781)
T ss_dssp EBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEEC
T ss_pred eCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEEC
Confidence 65666899998765433211 12345688998887765 5556776779999987765433221 134578899888
Q ss_pred CCCeEEEEeCCCcEEEEecCCCeeeEEecC------CCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCc
Q 010296 314 RKERVLTVGRDRSMQLWKVPEESRLVFRAP------ASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPL 387 (513)
Q Consensus 314 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 387 (513)
+++.+..++. +.|.+|+..++....+... ...|.++...++|.+..|+..+-|..|+..+++.. .+....
T Consensus 459 ~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~-- 534 (781)
T 3v9f_A 459 KNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVR-KFNQYE-- 534 (781)
T ss_dssp TTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEE-EECTTT--
T ss_pred CCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEE-EccCCC--
Confidence 8899888887 6689999887655443321 35688888889999888887656888887665432 222111
Q ss_pred ccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecC--
Q 010296 388 LDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLP-- 465 (513)
Q Consensus 388 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~-- 465 (513)
......|.++...++|.+.++.. .|.|..|+..+. .+..+....
T Consensus 535 -------------------------------~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~--~~~~~~~~~gl 580 (781)
T 3v9f_A 535 -------------------------------GFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNF--DYQVFQRKEGL 580 (781)
T ss_dssp -------------------------------TCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTC--CCEEECGGGTC
T ss_pred -------------------------------CCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCC--cEEEccccCCC
Confidence 11122389999999887666554 675588887665 223222111
Q ss_pred cccEEEEEEeecCCCEEEEEecCCCccccccc
Q 010296 466 LVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGH 497 (513)
Q Consensus 466 ~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~ 497 (513)
....|.++...++|.+.+++ ..| |..++.
T Consensus 581 ~~~~i~~i~~d~~g~lW~~t--~~G-l~~~~~ 609 (781)
T 3v9f_A 581 PNTHIRAISEDKNGNIWAST--NTG-ISCYIT 609 (781)
T ss_dssp SCCCCCEEEECSSSCEEEEC--SSC-EEEEET
T ss_pred CCceEEEEEECCCCCEEEEc--CCc-eEEEEC
Confidence 13457888888888866654 344 444544
No 250
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.91 E-value=8e-07 Score=88.44 Aligned_cols=156 Identities=15% Similarity=0.089 Sum_probs=93.2
Q ss_pred CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCC-EEEEEe------CCCc
Q 010296 171 DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGR-YLASGG------LDRH 243 (513)
Q Consensus 171 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~------~dg~ 243 (513)
+..|+.++.++.|.-+|..+++.+.......... .......++.. .=..+++ .+++++ .++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~----------~~~~~~sP~v~-~~~~~G~~~v~vg~~~~e~~~~g~ 185 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGA----------GYTMTGAPTIV-KDGKTGKVLLIHGSSGDEFGVVGR 185 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGG----------TCBCCSCCEEE-ECTTTCCEEEEECCBCGGGCCBCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCc----------CcccccCCEEe-CCCcCCcEEEEEeccccccCCCCE
Confidence 4578888899999999999999876441110000 00001112211 0001233 555554 3789
Q ss_pred EEEEeCCCcceeeeccCcCCC-----------------------------------------eEEEEEecCCCeEEEEeC
Q 010296 244 IHLWDTRIQEHIQAFPGHRGP-----------------------------------------VSCLTFRQGTSELFSGSF 282 (513)
Q Consensus 244 i~vwd~~~~~~~~~~~~~~~~-----------------------------------------v~~~~~~~~~~~l~~~~~ 282 (513)
|+.+|..+|+.+-........ -..+++.|...+++.+..
T Consensus 186 v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~g 265 (582)
T 1flg_A 186 LFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAG 265 (582)
T ss_dssp EEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEEC
T ss_pred EEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCC
Confidence 999999999876554321000 013566777777776653
Q ss_pred --------------------C----CcEEEEeCCCCceeEEeec--cc--------CCeEEEEee-CCC----eEEEEeC
Q 010296 283 --------------------D----RTVKIWNAEDRAYISTLFG--HQ--------SEVLTIDCL-RKE----RVLTVGR 323 (513)
Q Consensus 283 --------------------d----g~i~iwd~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~----~~~~~~~ 323 (513)
| +.|..+|..+++.+..+.. |. .++. +... .++ .++.++.
T Consensus 266 n~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~ 344 (582)
T 1flg_A 266 NPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADR 344 (582)
T ss_dssp CBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECT
T ss_pred CCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECC
Confidence 2 5899999999999887643 21 1121 1221 345 3557889
Q ss_pred CCcEEEEecCCCeee
Q 010296 324 DRSMQLWKVPEESRL 338 (513)
Q Consensus 324 d~~i~iwd~~~~~~~ 338 (513)
+|.++++|..+++.+
T Consensus 345 ~G~l~~lD~~tG~~l 359 (582)
T 1flg_A 345 NGFFYVVDRSNGKLQ 359 (582)
T ss_dssp TSEEEEEETTTCCEE
T ss_pred CceEEEEECCCCCEe
Confidence 999999999888766
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.90 E-value=9.4e-07 Score=76.44 Aligned_cols=195 Identities=10% Similarity=0.089 Sum_probs=126.4
Q ss_pred ceeeeccCcCCC--eEEEEEecCCCeEEEEeCCC--cEEEEeCCCCceeEEeecccCCeE--EEEeeCCCeEE-EEeCCC
Q 010296 253 EHIQAFPGHRGP--VSCLTFRQGTSELFSGSFDR--TVKIWNAEDRAYISTLFGHQSEVL--TIDCLRKERVL-TVGRDR 325 (513)
Q Consensus 253 ~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~-~~~~d~ 325 (513)
+.+.+++ |... ...+.|+ ++.++.+.+.+| .|+++|+.+++.+..+.... ... .++... ++++ +.-.++
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g-~~ly~ltw~~~ 107 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWK-DKIVGLTWKNG 107 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEET-TEEEEEESSSS
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeC-CEEEEEEeeCC
Confidence 3455564 5443 4788998 565555666665 89999999999988876433 333 345443 4555 445689
Q ss_pred cEEEEecCCCeeeEEecCCCCeeEEEeecCC-eEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccc
Q 010296 326 SMQLWKVPEESRLVFRAPASSLECCCFISND-EFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNG 404 (513)
Q Consensus 326 ~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 404 (513)
.+.+||..+.+.+........-..++ +++ .++.+..++.|.++|..+.+.+..+......
T Consensus 108 ~v~v~D~~t~~~~~ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g----------------- 168 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG----------------- 168 (262)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT-----------------
T ss_pred EEEEEECccCcEEEEEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC-----------------
Confidence 99999999888774333333333444 344 4665555788999999999998887642110
Q ss_pred cCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeec----------CcccEEEEEE
Q 010296 405 HSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNL----------PLVGFVNSLA 474 (513)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~----------~~~~~v~~v~ 474 (513)
.....++.+.|. +|++.+..-.++.|.+.|..++ +.+..+... +.....+.||
T Consensus 169 ---------------~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG-~V~~~Id~~~L~~~~~~~~~~~~vlNGIA 231 (262)
T 3nol_A 169 ---------------EELPELNELEWV-DGEIFANVWQTNKIVRIDPETG-KVTGIIDLNGILAEAGPLPSPIDVLNGIA 231 (262)
T ss_dssp ---------------EECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTC-BEEEEEECTTGGGGSCSCCSSCCCEEEEE
T ss_pred ---------------ccccccceeEEE-CCEEEEEEccCCeEEEEECCCC-cEEEEEECCcCccccccccCcCCceEEEE
Confidence 000115567776 6766665556789999999888 333333221 1124679999
Q ss_pred eecCCCEEEEEecC
Q 010296 475 FAKSGQFLIAGVGQ 488 (513)
Q Consensus 475 ~sp~~~~l~~~~~~ 488 (513)
|+|+++.|+++ |.
T Consensus 232 ~dp~~~~lfVT-GK 244 (262)
T 3nol_A 232 WDKEHHRLFVT-GK 244 (262)
T ss_dssp EETTTTEEEEE-ET
T ss_pred EcCCCCEEEEE-CC
Confidence 99998888877 44
No 252
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.88 E-value=5.3e-07 Score=77.92 Aligned_cols=194 Identities=10% Similarity=0.023 Sum_probs=126.8
Q ss_pred ceeeeccCcCC--CeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeE--EEEeeCCCeEEEEeCCCcEE
Q 010296 253 EHIQAFPGHRG--PVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVL--TIDCLRKERVLTVGRDRSMQ 328 (513)
Q Consensus 253 ~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~~~d~~i~ 328 (513)
+.+..++ |.. ....+.|+. +.++.+.+.+|.|+++|+.+++.+..+ -..... .+++..+..+++.-.++.+.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDGERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECSSCEEEEESSSCEEE
T ss_pred EEEEEEc-CCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeCCEEEEEEccCCEEE
Confidence 4455554 433 347888874 455667788889999999999988877 223333 35555443444555789999
Q ss_pred EEecCCCeeeEEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCC
Q 010296 329 LWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSEN 408 (513)
Q Consensus 329 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 408 (513)
+||..+.+.+........-..+++. .+.|+.+..++.|.++|..+.+.+..+.....
T Consensus 120 V~D~~Tl~~~~ti~~~~eGwGLt~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~---------------------- 176 (268)
T 3nok_A 120 TWSGMPPQRERTTRYSGEGWGLCYW-NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLR---------------------- 176 (268)
T ss_dssp EEETTTTEEEEEEECSSCCCCEEEE-TTEEEEECSSSEEEEECTTTCCEEEEEECEET----------------------
T ss_pred EEECCcCcEEEEEeCCCceeEEecC-CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCC----------------------
Confidence 9999998877433333333445532 34566666789999999999999888764221
Q ss_pred CCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeec-----------CcccEEEEEEeec
Q 010296 409 GNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNL-----------PLVGFVNSLAFAK 477 (513)
Q Consensus 409 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~-----------~~~~~v~~v~~sp 477 (513)
......++.+.|. +|++.+..-..+.|.+.|..++ +.+..+... ......+.|||+|
T Consensus 177 ----------g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG-~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp 244 (268)
T 3nok_A 177 ----------GQPVELINELECA-NGVIYANIWHSSDVLEIDPATG-TVVGVIDASALTRAVAGQVTNPEAVLNGIAVEP 244 (268)
T ss_dssp ----------TEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTC-BEEEEEECHHHHHHHTTTCCCTTCCEEEEEECT
T ss_pred ----------CcccccccccEEe-CCEEEEEECCCCeEEEEeCCCC-cEEEEEECCCCcccccccccCcCCceEEEEEcC
Confidence 0011125677776 6766655556789999999888 333332211 1224679999999
Q ss_pred CCCEEEEE
Q 010296 478 SGQFLIAG 485 (513)
Q Consensus 478 ~~~~l~~~ 485 (513)
+++.|+++
T Consensus 245 ~~~rlfVT 252 (268)
T 3nok_A 245 GSGRIFMT 252 (268)
T ss_dssp TTCCEEEE
T ss_pred CCCEEEEe
Confidence 87777666
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.88 E-value=4.3e-07 Score=83.68 Aligned_cols=234 Identities=7% Similarity=-0.020 Sum_probs=142.5
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeec-c------------------CcCCCeEEEEEecCCCeEEEEeCC
Q 010296 223 ILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAF-P------------------GHRGPVSCLTFRQGTSELFSGSFD 283 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~------------------~~~~~v~~~~~~~~~~~l~~~~~d 283 (513)
..+++|.+++++++++..++.|..|+..++...... . .....+..+++.++...|+.+...
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~ 100 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY 100 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC
Confidence 556889999987888888999999998765432111 0 012357899999833456666555
Q ss_pred CcEEEEeCCCCceeEEeec-----ccCCeEEEEeeC-CCeEEEEeC------------------CCcEEEEecCCCeeeE
Q 010296 284 RTVKIWNAEDRAYISTLFG-----HQSEVLTIDCLR-KERVLTVGR------------------DRSMQLWKVPEESRLV 339 (513)
Q Consensus 284 g~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~~~~~~------------------d~~i~iwd~~~~~~~~ 339 (513)
+.|..+|..++.. ..+.. .......+++.+ ++.++++.. .+.|..|+..++....
T Consensus 101 ~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 101 YHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp TEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred CCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence 6688999876542 22211 113467899999 888776653 2678888887665543
Q ss_pred EecCCCCeeEEEeecCCe-EE-EEeCCCCEEEEecCCCC--eeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCC
Q 010296 340 FRAPASSLECCCFISNDE-FL-SGSDDGSIELWSLLRKK--PVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGS 415 (513)
Q Consensus 340 ~~~~~~~v~~~~~~~~~~-~~-~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 415 (513)
..........+++++++. ++ +-...+.|.+|++.... ....+.. .
T Consensus 180 ~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~------------------------------ 228 (322)
T 2fp8_A 180 LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-I------------------------------ 228 (322)
T ss_dssp EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-C------------------------------
T ss_pred eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-C------------------------------
Confidence 332234456789999985 44 44566889999987532 1111110 0
Q ss_pred cCCCCCcceEEEEEEecCCCEEEEecC----------CCcEEEEEeCCCCcceeeeeecCc--ccEEEEEEeecCCCEEE
Q 010296 416 YHSSSAYSWVSSVTVCGGSDLAASGAG----------NGSVRLWAIESETKDIQPLYNLPL--VGFVNSLAFAKSGQFLI 483 (513)
Q Consensus 416 ~~~~~~~~~i~~~~~s~~~~~l~~g~~----------dg~v~vwd~~~~~~~~~~~~~~~~--~~~v~~v~~sp~~~~l~ 483 (513)
. . ...+++.++|++.++... .+.|..++.. + ..+..+..... ...++++++ .++. |+
T Consensus 229 ---~---g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G-~~~~~~~~~~g~~~~~~~~~~~-~~g~-L~ 297 (322)
T 2fp8_A 229 ---P---N-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-G-NILEVIPLPPPFAGEHFEQIQE-HDGL-LY 297 (322)
T ss_dssp ---S---S-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-S-CEEEEEECCTTTTTSCCCEEEE-ETTE-EE
T ss_pred ---C---C-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-C-CEEEEEECCCCCccccceEEEE-eCCE-EE
Confidence 1 1 567889999987666544 3557777653 2 33333332110 234666666 3554 55
Q ss_pred EEecCCCcccccccCC
Q 010296 484 AGVGQEPRLGRWGHLP 499 (513)
Q Consensus 484 ~~~~~dg~v~~W~~~~ 499 (513)
++....+.|.+++...
T Consensus 298 v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 298 IGTLFHGSVGILVYDK 313 (322)
T ss_dssp EECSSCSEEEEEEC--
T ss_pred EeecCCCceEEEeccc
Confidence 5546777888887643
No 254
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.87 E-value=3.5e-07 Score=79.13 Aligned_cols=181 Identities=10% Similarity=0.082 Sum_probs=122.4
Q ss_pred ccCCC--eEEEEECCCCCeEEEEeCCc--eEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCC
Q 010296 157 KHRQS--VTAVALSEDDSKGFSASKDG--SILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDG 232 (513)
Q Consensus 157 ~h~~~--V~~~~~s~~~~~l~t~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 232 (513)
.|... ...|.|+ ++.++.+.+.+| .|+++|+.+++.+..+.. ..........+.+
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l--------------------~~~~FgeGit~~g 96 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL--------------------GKRYFGEGISDWK 96 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC--------------------CTTCCEEEEEEET
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec--------------------CCccceeEEEEeC
Confidence 45433 4889998 666666777765 899999999998876510 1112222222235
Q ss_pred CEEEEEe-CCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeeccc-----CC
Q 010296 233 RYLASGG-LDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQ-----SE 306 (513)
Q Consensus 233 ~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~ 306 (513)
..|.... .++.+.+||..+.+.+.++.... ....+++++..|+.+...+.|.++|..+.+.+..+.-.. ..
T Consensus 97 ~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~ 173 (262)
T 3nol_A 97 DKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPE 173 (262)
T ss_dssp TEEEEEESSSSEEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCC
T ss_pred CEEEEEEeeCCEEEEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccc
Confidence 5555554 47899999999999998887432 223444677878877667889999999998887765321 23
Q ss_pred eEEEEeeCCCeEEEEe-CCCcEEEEecCCCeeeEEecC-------------CCCeeEEEeecCC-eEEEEe
Q 010296 307 VLTIDCLRKERVLTVG-RDRSMQLWKVPEESRLVFRAP-------------ASSLECCCFISND-EFLSGS 362 (513)
Q Consensus 307 v~~~~~~~~~~~~~~~-~d~~i~iwd~~~~~~~~~~~~-------------~~~v~~~~~~~~~-~~~~~~ 362 (513)
++.+.|. ++++++.. .++.|.+.|..+++....... ......++++|++ +|++.+
T Consensus 174 lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 174 LNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred cceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 4567776 67777666 588999999999887632211 2356789999976 444443
No 255
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.86 E-value=4.2e-07 Score=90.37 Aligned_cols=151 Identities=11% Similarity=0.041 Sum_probs=92.9
Q ss_pred CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeC------CCcE
Q 010296 171 DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGL------DRHI 244 (513)
Q Consensus 171 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~------dg~i 244 (513)
+..|++++.|+.|..+|..+++.+..+....... .......++. . ++ .+++++. ++.|
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~----------~~~~~~~P~v----~-~g-~v~vg~~~~~~~~~g~v 178 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKV----------GSTLTQAPFV----A-KD-TVLMGCSGAELGVRGAV 178 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGG----------TCBCCSCCEE----E-TT-EEEEECBCGGGTCCCEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCc----------cceeccCCEE----E-CC-EEEEEecCCccCCCCEE
Confidence 5678888889999999999998876541110000 0000111111 1 34 4555554 7899
Q ss_pred EEEeCCCcceeeeccCcCCC-------------------------------------e-EEEEEecCCCeEEEEeCC---
Q 010296 245 HLWDTRIQEHIQAFPGHRGP-------------------------------------V-SCLTFRQGTSELFSGSFD--- 283 (513)
Q Consensus 245 ~vwd~~~~~~~~~~~~~~~~-------------------------------------v-~~~~~~~~~~~l~~~~~d--- 283 (513)
+.+|..+|+.+..+...... + ..+++.+....++.++.+
T Consensus 179 ~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~ 258 (571)
T 2ad6_A 179 NAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAP 258 (571)
T ss_dssp EEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSC
T ss_pred EEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCcc
Confidence 99999999987655421100 0 235677766677766532
Q ss_pred -------------CcEEEEeCCCCceeEEeeccc----------CCeEEEEeeCCCe----EEEEeCCCcEEEEecCCCe
Q 010296 284 -------------RTVKIWNAEDRAYISTLFGHQ----------SEVLTIDCLRKER----VLTVGRDRSMQLWKVPEES 336 (513)
Q Consensus 284 -------------g~i~iwd~~~~~~~~~~~~~~----------~~v~~~~~~~~~~----~~~~~~d~~i~iwd~~~~~ 336 (513)
+.|..+|..+++.+..+.... .++. +....+++ ++.++.+|.++++|..+++
T Consensus 259 ~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 337 (571)
T 2ad6_A 259 WNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGN 337 (571)
T ss_dssp SCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCC
T ss_pred ccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCC
Confidence 359999999999887765321 1111 22223563 4467789999999998887
Q ss_pred ee
Q 010296 337 RL 338 (513)
Q Consensus 337 ~~ 338 (513)
.+
T Consensus 338 ~~ 339 (571)
T 2ad6_A 338 LI 339 (571)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 256
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.85 E-value=6e-07 Score=91.35 Aligned_cols=275 Identities=12% Similarity=0.078 Sum_probs=149.2
Q ss_pred EEEECC-CCCeEEEEeCCc-----------eEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC
Q 010296 164 AVALSE-DDSKGFSASKDG-----------SILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD 231 (513)
Q Consensus 164 ~~~~s~-~~~~l~t~~~dg-----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 231 (513)
++++.| +++.++.|+.+. .+.+||..+++..... .+ ...+.....++++.++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~-----~~-----------~~~~~~~~~~~~~~~~ 253 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT-----VT-----------VTKHDMFCPGISMDGN 253 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE-----EE-----------ECSCCCSSCEEEECTT
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc-----cc-----------CCCCCCccccccCCCC
Confidence 566777 888888887543 5888998877632210 00 0112233445778889
Q ss_pred CCEEEEEeC-CCcEEEEeCCCcceeeeccCcCC-CeEEEEEecCCCeEEEEe-CC-----CcEEEEeCCCCceeEEe---
Q 010296 232 GRYLASGGL-DRHIHLWDTRIQEHIQAFPGHRG-PVSCLTFRQGTSELFSGS-FD-----RTVKIWNAEDRAYISTL--- 300 (513)
Q Consensus 232 ~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~--- 300 (513)
++++++|+. +..+.+||..+.+....-..+.. .-.++++.++++.++.|+ .+ ..+.+||..+.+....-
T Consensus 254 g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~ 333 (656)
T 1k3i_A 254 GQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAK 333 (656)
T ss_dssp SCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSC
T ss_pred CCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcc
Confidence 999999984 46899999887654432221211 223456667899888888 34 57999999887643320
Q ss_pred -ecccCCeEEEEeeCCCe-EEEEeCC---------CcEEEEecCCCeeeEEec-C---------CCCeeEEEee-cCCe-
Q 010296 301 -FGHQSEVLTIDCLRKER-VLTVGRD---------RSMQLWKVPEESRLVFRA-P---------ASSLECCCFI-SNDE- 357 (513)
Q Consensus 301 -~~~~~~v~~~~~~~~~~-~~~~~~d---------~~i~iwd~~~~~~~~~~~-~---------~~~v~~~~~~-~~~~- 357 (513)
......-....+..++. ++.++.+ ..+..||..+........ . .....++.+. .+++
T Consensus 334 ~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i 413 (656)
T 1k3i_A 334 VNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKI 413 (656)
T ss_dssp SGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEE
T ss_pred ccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeE
Confidence 00000000011112332 2344433 456778877665332111 1 1122333333 2555
Q ss_pred EEEEeCCC-----------CEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEE
Q 010296 358 FLSGSDDG-----------SIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVS 426 (513)
Q Consensus 358 ~~~~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~ 426 (513)
++.|+.++ .|.+||..+..-....... ......-.
T Consensus 414 ~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~----------------------------------mp~~R~~~ 459 (656)
T 1k3i_A 414 LTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNG----------------------------------LYFARTFH 459 (656)
T ss_dssp EEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTC----------------------------------CSSCCBSC
T ss_pred EEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCC----------------------------------CCCCcccC
Confidence 55666432 4666666555432221000 00111134
Q ss_pred EEEEecCCCEEEEecCC-----------CcEEEEEeCCCCcceeeeeecCccc-EEEEEEeecCCCEEEEEecCCC
Q 010296 427 SVTVCGGSDLAASGAGN-----------GSVRLWAIESETKDIQPLYNLPLVG-FVNSLAFAKSGQFLIAGVGQEP 490 (513)
Q Consensus 427 ~~~~s~~~~~l~~g~~d-----------g~v~vwd~~~~~~~~~~~~~~~~~~-~v~~v~~sp~~~~l~~~~~~dg 490 (513)
++++.|+++++++|+.+ ..+.+||..+. ....+...+... ...+..+.|+|+.++.|++..+
T Consensus 460 ~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~--~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~~~ 533 (656)
T 1k3i_A 460 TSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD--TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCG 533 (656)
T ss_dssp EEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT--EEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCT
T ss_pred CeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC--ceeecCCCCCccccccHhhcCCCcEEEecCCCCCC
Confidence 55667899999999854 46899998775 233333222211 1223456799999999854333
No 257
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.85 E-value=1.7e-05 Score=72.34 Aligned_cols=223 Identities=14% Similarity=0.024 Sum_probs=136.6
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCC--cEEEEeCCCCceeE
Q 010296 221 KHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDR--TVKIWNAEDRAYIS 298 (513)
Q Consensus 221 ~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~ 298 (513)
.....++|+++++++++-...+.|..|+.... ....+. ....+..+++.++++++++..... .|..++..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 34778999999987777767899999997653 333332 234688999999998655544322 47777877776543
Q ss_pred Eeec-ccCCeEEEEeeCCCeEEEEe-CCCcEEEEecCCCeeeEE--e---------cCCCCeeEEEeecCC-e-EEEEeC
Q 010296 299 TLFG-HQSEVLTIDCLRKERVLTVG-RDRSMQLWKVPEESRLVF--R---------APASSLECCCFISND-E-FLSGSD 363 (513)
Q Consensus 299 ~~~~-~~~~v~~~~~~~~~~~~~~~-~d~~i~iwd~~~~~~~~~--~---------~~~~~v~~~~~~~~~-~-~~~~~~ 363 (513)
.... .......++..+++.++++. ..+.|+++|...+..... . ........+ ++++ . +++-..
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 2221 12223445555666666555 588899999875432111 1 111233444 6665 3 446666
Q ss_pred CCCEEEEecCC-CCe--eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEe
Q 010296 364 DGSIELWSLLR-KKP--VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASG 440 (513)
Q Consensus 364 dg~i~iwd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g 440 (513)
.+.|..|++.. ++. ...+... .....++++++|+++++.
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~~~--------------------------------------~~P~gi~vd~dG~l~va~ 229 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFVEQ--------------------------------------TNIDDFAFDVEGNLYGAT 229 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEES--------------------------------------CCCSSEEEBTTCCEEEEC
T ss_pred CCEEEEEEeCCCCCCCccEEEecc--------------------------------------CCCCCeEECCCCCEEEEe
Confidence 78899998864 221 1111000 115678999999887777
Q ss_pred cCCCcEEEEEeCCCCcceeeeeecC-cccEEEEEEee---cCCCEEEEEecC
Q 010296 441 AGNGSVRLWAIESETKDIQPLYNLP-LVGFVNSLAFA---KSGQFLIAGVGQ 488 (513)
Q Consensus 441 ~~dg~v~vwd~~~~~~~~~~~~~~~-~~~~v~~v~~s---p~~~~l~~~~~~ 488 (513)
...+.|.+++.. + . +..+..+. ....+++++|. |++..|+++...
T Consensus 230 ~~~~~V~~~~~~-G-~-~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 230 HIYNSVVRIAPD-R-S-TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp BTTCCEEEECTT-C-C-EEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred CCCCeEEEECCC-C-C-EEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 778899999864 3 2 22222222 22457899999 898888777443
No 258
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.85 E-value=1.5e-06 Score=86.42 Aligned_cols=202 Identities=8% Similarity=-0.021 Sum_probs=118.2
Q ss_pred CCeEEEEeC-CceEEEEeC-CCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 010296 171 DSKGFSASK-DGSILHWDV-SSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWD 248 (513)
Q Consensus 171 ~~~l~t~~~-dg~v~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd 248 (513)
+..|++++. ++.|.-+|. .+++.+..+........ ... .. ...... .+++ .+..+++++.++.|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~-~~~--~~-~~~~~~----~~~~--~~~~v~v~~~dg~l~alD 131 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDAST-KAV--MC-CDVVDR----GLAY--GAGQIVKKQANGHLLALD 131 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGG-GGG--CT-TCSCCC----CCEE--ETTEEEEECTTSEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccc-ccc--cc-cccccc----ccEE--ECCEEEEEeCCCEEEEEE
Confidence 456777777 899999999 89988765422110000 000 00 000001 1122 256788888899999999
Q ss_pred CCCcceeeeccCcC--C--CeEE-EEEecCCCeEEEEeC------CCcEEEEeCCCCceeEEeecccCC-----------
Q 010296 249 TRIQEHIQAFPGHR--G--PVSC-LTFRQGTSELFSGSF------DRTVKIWNAEDRAYISTLFGHQSE----------- 306 (513)
Q Consensus 249 ~~~~~~~~~~~~~~--~--~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~----------- 306 (513)
..+|+.+..+.... . .+.+ .... + ..+++++. ++.|..+|..+++.+..+......
T Consensus 132 ~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~ 209 (571)
T 2ad6_A 132 AKTGKINWEVEVCDPKVGSTLTQAPFVA-K-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNS 209 (571)
T ss_dssp TTTCCEEEEEECCCGGGTCBCCSCCEEE-T-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTT
T ss_pred CCCCCEEEEecCCCCCccceeccCCEEE-C-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccc
Confidence 99999876554211 0 1111 1111 3 35555554 799999999999988776532110
Q ss_pred --------------------------e-EEEEeeCC-CeEEEEeCC----------------CcEEEEecCCCeeeE-Ee
Q 010296 307 --------------------------V-LTIDCLRK-ERVLTVGRD----------------RSMQLWKVPEESRLV-FR 341 (513)
Q Consensus 307 --------------------------v-~~~~~~~~-~~~~~~~~d----------------~~i~iwd~~~~~~~~-~~ 341 (513)
+ ..+++.+. +.++.+..+ +.|..+|..+++.+. +.
T Consensus 210 ~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~ 289 (571)
T 2ad6_A 210 ANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQ 289 (571)
T ss_dssp TCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEE
T ss_pred ccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEec
Confidence 0 12344453 455554421 358999999888763 22
Q ss_pred cCC---------CCeeEEEeecCCe----EEEEeCCCCEEEEecCCCCeeEEeecC
Q 010296 342 APA---------SSLECCCFISNDE----FLSGSDDGSIELWSLLRKKPVYIVKNA 384 (513)
Q Consensus 342 ~~~---------~~v~~~~~~~~~~----~~~~~~dg~i~iwd~~~~~~~~~~~~~ 384 (513)
... .....+....+|+ ++.++.+|.++++|..+++.+..+...
T Consensus 290 ~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~ 345 (571)
T 2ad6_A 290 KTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVD 345 (571)
T ss_dssp SSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred CCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeeccc
Confidence 211 1111122224663 567888999999999999998887643
No 259
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.82 E-value=4.7e-05 Score=69.96 Aligned_cols=278 Identities=8% Similarity=-0.022 Sum_probs=153.6
Q ss_pred CCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE
Q 010296 159 RQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG 238 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 238 (513)
...+.+|.|.+.+..+++ +..|.| +...+.++.-..+.. ........+.+|.|.+ +..+++
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~---------------~~~~~~~~~~~i~~~~-~~~~~~- 95 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATL-METRDGGQTWEPRTL---------------VLDHSDYRFNSVSFQG-NEGWIV- 95 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEE-EEESSTTSSCEECCC---------------CCSCCCCEEEEEEEET-TEEEEE-
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCCCCeECCC---------------CCCCCCccEEEEEecC-CeEEEE-
Confidence 457999999888777774 556765 333444432211100 0011234688999986 444444
Q ss_pred eCCCcEEEEeCCCcceeeecc---CcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCce-eEEeecccCCeEEEEeeC
Q 010296 239 GLDRHIHLWDTRIQEHIQAFP---GHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAY-ISTLFGHQSEVLTIDCLR 314 (513)
Q Consensus 239 ~~dg~i~vwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~~ 314 (513)
+..+.|+. ....++.-..+. .+...+..+.+.+++..++++ .+|.|..- ...++. ..........+..+.+.+
T Consensus 96 g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~ 172 (327)
T 2xbg_A 96 GEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSP 172 (327)
T ss_dssp EETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECT
T ss_pred ECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCEEeecCCCcceEEEEEcC
Confidence 44565544 323333222221 233557888887776655554 45654332 222332 222234456788999999
Q ss_pred CCeEEEEeCCCcEEEEe-c--CCCeeeEEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCC
Q 010296 315 KERVLTVGRDRSMQLWK-V--PEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGL 391 (513)
Q Consensus 315 ~~~~~~~~~d~~i~iwd-~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 391 (513)
++.+++++..+.++.-. - .+-..+ .......+..+.+.+++.+++++.+|.+++.+...++.-..+....
T Consensus 173 ~~~~~~~g~~G~~~~S~d~gG~tW~~~-~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~------ 245 (327)
T 2xbg_A 173 SGEYVAVSSRGSFYSTWEPGQTAWEPH-NRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPL------ 245 (327)
T ss_dssp TSCEEEEETTSSEEEEECTTCSSCEEE-ECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTT------
T ss_pred CCcEEEEECCCcEEEEeCCCCCceeEC-CCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCc------
Confidence 88888877777765543 2 222222 2334456788888888888777788887766422222111111000
Q ss_pred CCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeec-CcccEE
Q 010296 392 KNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNL-PLVGFV 470 (513)
Q Consensus 392 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~-~~~~~v 470 (513)
......+..+++.+++.+++++. +|.| ++....+ .....+... .....+
T Consensus 246 ---------------------------~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG-~tW~~~~~~~~~~~~~ 295 (327)
T 2xbg_A 246 ---------------------------RRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGG-QTWQQDVDVKKVPSNF 295 (327)
T ss_dssp ---------------------------SSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTT-SSCEECGGGTTSSSCC
T ss_pred ---------------------------ccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCC-cccEEcCccCCCCCCe
Confidence 00111278889998887777665 6666 3444444 444444321 123557
Q ss_pred EEEEeecCCCEEEEEecCCCccccccc
Q 010296 471 NSLAFAKSGQFLIAGVGQEPRLGRWGH 497 (513)
Q Consensus 471 ~~v~~sp~~~~l~~~~~~dg~v~~W~~ 497 (513)
.+|.|.+++. ++++ +.+|.|..++-
T Consensus 296 ~~v~~~~~~~-~~~~-G~~G~i~~~~~ 320 (327)
T 2xbg_A 296 YKILFFSPDQ-GFIL-GQKGILLRYVT 320 (327)
T ss_dssp CEEEEEETTE-EEEE-CSTTEEEEECC
T ss_pred EEEEEECCCc-eEEE-cCCceEEEEcC
Confidence 8888886655 4444 67888766653
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.81 E-value=4.6e-06 Score=71.50 Aligned_cols=195 Identities=10% Similarity=-0.015 Sum_probs=125.5
Q ss_pred ceeeeccCcC--CCeEEEEEecCCCeEEEEeCC--CcEEEEeCCCCceeEEeecccCC-eEEEEeeCCCeEE-EEeCCCc
Q 010296 253 EHIQAFPGHR--GPVSCLTFRQGTSELFSGSFD--RTVKIWNAEDRAYISTLFGHQSE-VLTIDCLRKERVL-TVGRDRS 326 (513)
Q Consensus 253 ~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~-~~~~d~~ 326 (513)
+.+..++ |. .....+.|++ +.++.+.+.. ..|+++|+.+++.+..+...... --.++.. +++++ ..-.++.
T Consensus 10 ~v~~~~p-hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRYP-HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSE
T ss_pred EEEEEcC-CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCE
Confidence 3455553 54 3467899986 4445565654 48999999999998877533322 1334444 34555 5557899
Q ss_pred EEEEecCCCeeeEEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccC
Q 010296 327 MQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHS 406 (513)
Q Consensus 327 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 406 (513)
+.+||..+.+.+........-..++.. .+.|+++..++.|.++|..+.+.+..+......
T Consensus 87 v~v~D~~tl~~~~ti~~~~~Gwglt~d-g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g------------------- 146 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGEGWALTSD-DSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGG------------------- 146 (243)
T ss_dssp EEEEETTTTEEEEEEECSSCCCEEEEC-SSCEEEECSSSEEEEECTTTCCEEEEEECEETT-------------------
T ss_pred EEEEECCcCcEEEEEeCCCCceEEeeC-CCEEEEECCCCeEEEEeCCCCeEEEEEEEccCC-------------------
Confidence 999999998877443333333455532 335666666889999999999998888643210
Q ss_pred CCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeec-----------CcccEEEEEEe
Q 010296 407 ENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNL-----------PLVGFVNSLAF 475 (513)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~-----------~~~~~v~~v~~ 475 (513)
.....++-+.+. +|++++..-....|.+.|..++ +.+..+... +.....+.|++
T Consensus 147 -------------~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG-~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~ 211 (243)
T 3mbr_X 147 -------------RPLDNLNELEWV-NGELLANVWLTSRIARIDPASG-KVVAWIDLQALVPDADALTDSTNDVLNGIAF 211 (243)
T ss_dssp -------------EECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTC-BEEEEEECGGGSTTTTSCCCTTSSCEEEEEE
T ss_pred -------------cccccceeeEEe-CCEEEEEECCCCeEEEEECCCC-CEEEEEECCcCccccccccCCcCCceEEEEE
Confidence 001125666665 6666655556778999999988 333332211 12346899999
Q ss_pred ecCCCEEEEE
Q 010296 476 AKSGQFLIAG 485 (513)
Q Consensus 476 sp~~~~l~~~ 485 (513)
+|++..|+++
T Consensus 212 d~~~~~lfVT 221 (243)
T 3mbr_X 212 DAEHDRLFVT 221 (243)
T ss_dssp ETTTTEEEEE
T ss_pred cCCCCEEEEE
Confidence 9998887777
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.81 E-value=9.5e-07 Score=87.73 Aligned_cols=203 Identities=7% Similarity=-0.009 Sum_probs=119.7
Q ss_pred CCeEEEEeC-CceEEEEeC-CCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCE----EEEEeCCCcE
Q 010296 171 DSKGFSASK-DGSILHWDV-SSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRY----LASGGLDRHI 244 (513)
Q Consensus 171 ~~~l~t~~~-dg~v~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~----l~s~~~dg~i 244 (513)
+..|++++. ++.|.-+|. .+++.+..+.......... ....+ .....++++|.+.. |++++.++.|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~-------~~~~~-~~~~g~av~p~~g~~~~rV~v~t~dg~l 133 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARA-------VACCD-LVNRGLAYWPGDGKTPALILKTQLDGNV 133 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGG-------GCSSC-SCCCCCEEECCCSSSCCEEEEECTTSEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccc-------ccccc-ccccceEEEecCCcceeEEEEEcCCCEE
Confidence 456777777 889999999 8998876552211100000 00000 00112345443434 7888889999
Q ss_pred EEEeCCCcceeeeccCcC----CCeEE-EEEecCCCeEEEEe------CCCcEEEEeCCCCceeEEeecccCC-------
Q 010296 245 HLWDTRIQEHIQAFPGHR----GPVSC-LTFRQGTSELFSGS------FDRTVKIWNAEDRAYISTLFGHQSE------- 306 (513)
Q Consensus 245 ~vwd~~~~~~~~~~~~~~----~~v~~-~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~------- 306 (513)
..+|..+|+.+-...... ..+.+ ..+. ++ .+++++ .+|.|+.+|..+++.+..+......
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p 211 (599)
T 1w6s_A 134 AALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLAS 211 (599)
T ss_dssp EEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCT
T ss_pred EEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccc
Confidence 999999999876554221 01111 1111 33 455554 3799999999999988776532111
Q ss_pred ------------------------------e-EEEEeeCC-CeEEEEeCC----------------CcEEEEecCCCeee
Q 010296 307 ------------------------------V-LTIDCLRK-ERVLTVGRD----------------RSMQLWKVPEESRL 338 (513)
Q Consensus 307 ------------------------------v-~~~~~~~~-~~~~~~~~d----------------~~i~iwd~~~~~~~ 338 (513)
+ ..+++.+. +.++.+..+ +.|..+|..+++.+
T Consensus 212 ~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~ 291 (599)
T 1w6s_A 212 DFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAK 291 (599)
T ss_dssp TTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEE
T ss_pred ccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCcee
Confidence 0 12334443 455555543 47999999998876
Q ss_pred E-EecCCC---------CeeEEEee-cCC---e-EEEEeCCCCEEEEecCCCCeeEEeec
Q 010296 339 V-FRAPAS---------SLECCCFI-SND---E-FLSGSDDGSIELWSLLRKKPVYIVKN 383 (513)
Q Consensus 339 ~-~~~~~~---------~v~~~~~~-~~~---~-~~~~~~dg~i~iwd~~~~~~~~~~~~ 383 (513)
- +..... ...-+... .+| . ++.++.+|.++++|..+++++.....
T Consensus 292 W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 351 (599)
T 1w6s_A 292 FGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKL 351 (599)
T ss_dssp EEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred eEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccc
Confidence 3 222211 11112222 355 3 55788999999999999999887764
No 262
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.79 E-value=1.6e-06 Score=86.09 Aligned_cols=158 Identities=11% Similarity=0.096 Sum_probs=96.4
Q ss_pred EEECCCCCe----EEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEe-
Q 010296 165 VALSEDDSK----GFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGG- 239 (513)
Q Consensus 165 ~~~s~~~~~----l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~- 239 (513)
++++|.+.. |++++.|+.|..+|..+++.+......... ........++. . ++ .+++++
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~----------~~~~~~ssP~v----~-~g-~V~vg~~ 174 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIK----------VGSTLTIAPYV----V-KD-KVIIGSS 174 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGG----------GTCBCCSCCEE----E-TT-EEEECCB
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCC----------ccceeecCCEE----E-CC-EEEEEec
Confidence 445444444 888889999999999999887643110000 00000111111 1 34 455544
Q ss_pred -----CCCcEEEEeCCCcceeeeccCcCCC-------------------------------------e-EEEEEecCCCe
Q 010296 240 -----LDRHIHLWDTRIQEHIQAFPGHRGP-------------------------------------V-SCLTFRQGTSE 276 (513)
Q Consensus 240 -----~dg~i~vwd~~~~~~~~~~~~~~~~-------------------------------------v-~~~~~~~~~~~ 276 (513)
.+|.|+.+|..+|+.+-.+...... + ..+++.+...+
T Consensus 175 g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~ 254 (599)
T 1w6s_A 175 GAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNL 254 (599)
T ss_dssp CGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTE
T ss_pred ccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCE
Confidence 3789999999999987655421110 1 13566677777
Q ss_pred EEEEeCC----------------CcEEEEeCCCCceeEEeecccCC---------eEEEEee-CCC---e-EEEEeCCCc
Q 010296 277 LFSGSFD----------------RTVKIWNAEDRAYISTLFGHQSE---------VLTIDCL-RKE---R-VLTVGRDRS 326 (513)
Q Consensus 277 l~~~~~d----------------g~i~iwd~~~~~~~~~~~~~~~~---------v~~~~~~-~~~---~-~~~~~~d~~ 326 (513)
++.++.+ +.|..+|..+++.+..+...... ..-+... .++ . ++.++.+|.
T Consensus 255 vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~ 334 (599)
T 1w6s_A 255 IYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGI 334 (599)
T ss_dssp EEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSE
T ss_pred EEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcE
Confidence 8877655 37999999999988776543211 1112222 345 3 446778999
Q ss_pred EEEEecCCCeee
Q 010296 327 MQLWKVPEESRL 338 (513)
Q Consensus 327 i~iwd~~~~~~~ 338 (513)
++++|..+++.+
T Consensus 335 l~~lD~~tG~~l 346 (599)
T 1w6s_A 335 VYTLDRTDGALV 346 (599)
T ss_dssp EEEEETTTCCEE
T ss_pred EEEEECCCCCEe
Confidence 999999988776
No 263
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.78 E-value=9.8e-07 Score=91.11 Aligned_cols=193 Identities=10% Similarity=0.018 Sum_probs=116.0
Q ss_pred ccCC-CeEEEEEC-CCCCeEEEEe-CC----ceEEEEeCCCC-ccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE
Q 010296 157 KHRQ-SVTAVALS-EDDSKGFSAS-KD----GSILHWDVSSG-KGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV 228 (513)
Q Consensus 157 ~h~~-~V~~~~~s-~~~~~l~t~~-~d----g~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 228 (513)
+|.- .+...+|| |||++||-+. .+ .+|+++|+.++ +.+.. .-......++|
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~---------------------~~~~~~~~~~W 228 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD---------------------KVSGTNGEIVW 228 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC---------------------CEEEECSCCEE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc---------------------cccCceeeEEE
Confidence 3443 68889999 9999888443 23 35999999988 53210 00111346899
Q ss_pred cCCCCEEEEEeCC-----CcEEEEeCCCcce--eeecc-CcCCCeEEEEEecCCCeEEEEeC---CCcEEEEeCCCCc-e
Q 010296 229 SSDGRYLASGGLD-----RHIHLWDTRIQEH--IQAFP-GHRGPVSCLTFRQGTSELFSGSF---DRTVKIWNAEDRA-Y 296 (513)
Q Consensus 229 s~~~~~l~s~~~d-----g~i~vwd~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~-~ 296 (513)
+|||+.|+....+ ..|+++++.++.. ...+. ........+.|+|++++|+..+. ...|+++|+.++. .
T Consensus 229 spDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~ 308 (751)
T 2xe4_A 229 GPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAH 308 (751)
T ss_dssp CSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTC
T ss_pred ecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCC
Confidence 9999888877654 3688888877642 22222 22345678899999999886553 3468889998752 1
Q ss_pred e--EEe-ecccCCeEEEEeeCCCeEEEEeC-C----CcEEEEecCCC-eeeE-EecCCC--CeeEEEeecCCeEEEEeCC
Q 010296 297 I--STL-FGHQSEVLTIDCLRKERVLTVGR-D----RSMQLWKVPEE-SRLV-FRAPAS--SLECCCFISNDEFLSGSDD 364 (513)
Q Consensus 297 ~--~~~-~~~~~~v~~~~~~~~~~~~~~~~-d----~~i~iwd~~~~-~~~~-~~~~~~--~v~~~~~~~~~~~~~~~~d 364 (513)
. ..+ ........++.|+.++.|+..+. + ..|..+++.+. .... +..+.. .+..+.+..+..+++...+
T Consensus 309 ~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~ 388 (751)
T 2xe4_A 309 NTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRA 388 (751)
T ss_dssp CCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEET
T ss_pred ceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeC
Confidence 2 333 33445567777666777665443 2 25667776642 2122 233333 3444555432235566777
Q ss_pred CCEEEE
Q 010296 365 GSIELW 370 (513)
Q Consensus 365 g~i~iw 370 (513)
+..+||
T Consensus 389 g~~~l~ 394 (751)
T 2xe4_A 389 GLTRIW 394 (751)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 765444
No 264
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.76 E-value=1e-05 Score=69.41 Aligned_cols=158 Identities=9% Similarity=-0.029 Sum_probs=107.9
Q ss_pred ccEEEEEEcCCCCEEEEEeCC--CcEEEEeCCCcceeeeccCcCCCe-EEEEEecCCCeEE-EEeCCCcEEEEeCCCCce
Q 010296 221 KHILALAVSSDGRYLASGGLD--RHIHLWDTRIQEHIQAFPGHRGPV-SCLTFRQGTSELF-SGSFDRTVKIWNAEDRAY 296 (513)
Q Consensus 221 ~~v~~~~~s~~~~~l~s~~~d--g~i~vwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~ 296 (513)
.-...+.|++ +.++.+.+.. ..|+++|+.+++.+..+....... ..+++. +..|+ ..-.++.+.+||..+.+.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcE
Confidence 4467899986 5556666654 489999999999988776433221 234443 45555 445688999999999999
Q ss_pred eEEeecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeeeEEec---CC---CCeeEEEeecCCeEEEEe-CCCCEEE
Q 010296 297 ISTLFGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRA---PA---SSLECCCFISNDEFLSGS-DDGSIEL 369 (513)
Q Consensus 297 ~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~---~~---~~v~~~~~~~~~~~~~~~-~dg~i~i 369 (513)
+.++... ..-..+++. .++++.+..++.|.++|..+.+...... +. ..+..+.+. +|.+.+.. .+..|.+
T Consensus 98 ~~ti~~~-~~Gwglt~d-g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~v 174 (243)
T 3mbr_X 98 RARFRYP-GEGWALTSD-DSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIAR 174 (243)
T ss_dssp EEEEECS-SCCCEEEEC-SSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred EEEEeCC-CCceEEeeC-CCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEE
Confidence 9888743 333555542 3466666668899999998876652221 11 234455655 66655444 5789999
Q ss_pred EecCCCCeeEEeecC
Q 010296 370 WSLLRKKPVYIVKNA 384 (513)
Q Consensus 370 wd~~~~~~~~~~~~~ 384 (513)
.|..+++.+..+...
T Consensus 175 IDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 175 IDPASGKVVAWIDLQ 189 (243)
T ss_dssp ECTTTCBEEEEEECG
T ss_pred EECCCCCEEEEEECC
Confidence 999999999988743
No 265
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.75 E-value=2.2e-06 Score=74.14 Aligned_cols=155 Identities=7% Similarity=0.005 Sum_probs=107.5
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEE-EEeCCCcEEEEeCCCCceeEEee
Q 010296 223 ILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELF-SGSFDRTVKIWNAEDRAYISTLF 301 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~ 301 (513)
...|.|+ ++.++++.+.+|.|+++|+.+++.+..+ -. .........+.+..|+ +.-.++.+.+||..+.+.+.++.
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 5678887 4666777788889999999999988877 22 2333322333444555 44468899999999999998887
Q ss_pred cccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeeeEEe---cCC---CCeeEEEeecCCeEEEEe-CCCCEEEEecCC
Q 010296 302 GHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRLVFR---APA---SSLECCCFISNDEFLSGS-DDGSIELWSLLR 374 (513)
Q Consensus 302 ~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~---~~~---~~v~~~~~~~~~~~~~~~-~dg~i~iwd~~~ 374 (513)
. ...-..+++. ...|+.+..++.|.++|..+.+..... ... ..+..+.|. +|.+.+.. ....|.+.|..+
T Consensus 134 ~-~~eGwGLt~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~T 210 (268)
T 3nok_A 134 Y-SGEGWGLCYW-NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPAT 210 (268)
T ss_dssp C-SSCCCCEEEE-TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTT
T ss_pred C-CCceeEEecC-CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCC
Confidence 4 3333455543 346666666899999999887765221 111 234556666 66755544 678999999999
Q ss_pred CCeeEEeec
Q 010296 375 KKPVYIVKN 383 (513)
Q Consensus 375 ~~~~~~~~~ 383 (513)
++.+..+..
T Consensus 211 G~V~~~Idl 219 (268)
T 3nok_A 211 GTVVGVIDA 219 (268)
T ss_dssp CBEEEEEEC
T ss_pred CcEEEEEEC
Confidence 999998874
No 266
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.72 E-value=1.4e-05 Score=72.75 Aligned_cols=194 Identities=10% Similarity=-0.026 Sum_probs=116.6
Q ss_pred CCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEe
Q 010296 160 QSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGG 239 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 239 (513)
.....++|+++++++++-...+.|..|+..+.. ...+ .....+..+++.++|+++++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~~~--------------------~~~~~p~gia~~~dG~l~vad~ 90 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-QIHA--------------------TVEGKVSGLAFTSNGDLVATGW 90 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EEEE--------------------ECSSEEEEEEECTTSCEEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-EEEE--------------------eCCCCceeEEEcCCCcEEEEec
Confidence 567899999999977777688999999977532 2211 1123588999999999766654
Q ss_pred CC--CcEEEEeCCCcceeeeccC-cCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCce-eEEee---------cccCC
Q 010296 240 LD--RHIHLWDTRIQEHIQAFPG-HRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAY-ISTLF---------GHQSE 306 (513)
Q Consensus 240 ~d--g~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~---------~~~~~ 306 (513)
.. ..|..++..+++....... .......++..+++..+++-...+.|+++|..++.. +.... ..-..
T Consensus 91 ~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~ 170 (306)
T 2p4o_A 91 NADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 170 (306)
T ss_dssp CTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred cCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCc
Confidence 32 2477778777765432221 222345556555544444444688999999876431 21111 11123
Q ss_pred eEEEEeeCCC-eEEE-EeCCCcEEEEecCC-Cee--eEEecCCCCeeEEEeecCCeEEE-EeCCCCEEEEecCCCCe
Q 010296 307 VLTIDCLRKE-RVLT-VGRDRSMQLWKVPE-ESR--LVFRAPASSLECCCFISNDEFLS-GSDDGSIELWSLLRKKP 377 (513)
Q Consensus 307 v~~~~~~~~~-~~~~-~~~d~~i~iwd~~~-~~~--~~~~~~~~~v~~~~~~~~~~~~~-~~~dg~i~iwd~~~~~~ 377 (513)
...+ ++++ .+++ -...+.|..|++.. +.. ............+++.++|.+++ ....+.|.+++.. ++.
T Consensus 171 pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp EEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE
T ss_pred CCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE
Confidence 4455 5655 4544 44578899999864 221 11111113456688888887554 4457889999864 544
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.71 E-value=4.2e-06 Score=83.22 Aligned_cols=202 Identities=10% Similarity=-0.023 Sum_probs=115.9
Q ss_pred CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010296 171 DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTR 250 (513)
Q Consensus 171 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~ 250 (513)
+..|++++.++.|.-+|..+++.+..+......... + ....-. ..+++ .+..+++++.++.|..+|..
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~-----~--~~~~~~---~g~a~--~~~~v~~~t~dg~l~AlD~~ 135 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIR-----P--CCDVVN---RGAAI--YGDKVFFGTLDASVVALNKN 135 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCC-----C--SSCSCC---CCCEE--ETTEEEEEETTTEEEEEESS
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccc-----c--ccccCC---CccEE--ECCEEEEEeCCCEEEEEECC
Confidence 345666665445899999999987655211110000 0 000000 11122 25577888889999999999
Q ss_pred CcceeeeccCcCC----CeE-EEEEec---CCC-eEEEEe------CCCcEEEEeCCCCceeEEeecccCCe--------
Q 010296 251 IQEHIQAFPGHRG----PVS-CLTFRQ---GTS-ELFSGS------FDRTVKIWNAEDRAYISTLFGHQSEV-------- 307 (513)
Q Consensus 251 ~~~~~~~~~~~~~----~v~-~~~~~~---~~~-~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~v-------- 307 (513)
+|+.+-.+..... .+. ...+.. +++ .+++++ .++.|+.+|..+++.+.........+
T Consensus 136 TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~ 215 (582)
T 1flg_A 136 TGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDS 215 (582)
T ss_dssp SCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEE
T ss_pred CCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccc
Confidence 9998766543210 111 111121 233 566654 37899999999999877653211000
Q ss_pred ---------------------------------EEEEeeCC-CeEEEEeC--------------------C----CcEEE
Q 010296 308 ---------------------------------LTIDCLRK-ERVLTVGR--------------------D----RSMQL 329 (513)
Q Consensus 308 ---------------------------------~~~~~~~~-~~~~~~~~--------------------d----~~i~i 329 (513)
..+++.+. +.++++.. | +.|..
T Consensus 216 ~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~A 295 (582)
T 1flg_A 216 TVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVG 295 (582)
T ss_dssp EESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEE
T ss_pred ccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEE
Confidence 12334443 45554442 2 57999
Q ss_pred EecCCCeeeEEe-c--CC-------CCeeEEEee-cCC----eEEEEeCCCCEEEEecCCCCeeEEeecC
Q 010296 330 WKVPEESRLVFR-A--PA-------SSLECCCFI-SND----EFLSGSDDGSIELWSLLRKKPVYIVKNA 384 (513)
Q Consensus 330 wd~~~~~~~~~~-~--~~-------~~v~~~~~~-~~~----~~~~~~~dg~i~iwd~~~~~~~~~~~~~ 384 (513)
+|..+++.+-.. . +. ....-+... .+| .++.++.+|.++++|..+++++..+...
T Consensus 296 lD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~ 365 (582)
T 1flg_A 296 VDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFV 365 (582)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred EeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccc
Confidence 999998877332 2 21 111111221 345 3668899999999999999999887654
No 268
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.66 E-value=2.3e-05 Score=68.28 Aligned_cols=200 Identities=9% Similarity=0.090 Sum_probs=131.5
Q ss_pred hhhccCCCeEEEEECCCCCeEE-EEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCC
Q 010296 154 VLLKHRQSVTAVALSEDDSKGF-SASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDG 232 (513)
Q Consensus 154 ~~~~h~~~V~~~~~s~~~~~l~-t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 232 (513)
.+.+-.+.+..|+|+|++..|+ +...++.|...|.. ++.+..+. + .-....-.|++.+++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~-----------------l-~g~~D~EGIa~~~~g 81 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP-----------------L-DFVKDLETIEYIGDN 81 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEE-----------------C-SSCSSEEEEEECSTT
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe-----------------c-CCCCChHHeEEeCCC
Confidence 4556667899999999876555 56778999999988 76665440 1 112457788888888
Q ss_pred CEEEEEeCCCcEEEEeCCCcce---eeec------cCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCC---CceeEEe
Q 010296 233 RYLASGGLDRHIHLWDTRIQEH---IQAF------PGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAED---RAYISTL 300 (513)
Q Consensus 233 ~~l~s~~~dg~i~vwd~~~~~~---~~~~------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~ 300 (513)
.++++.-.++.+.++++..... +... .........|+|+|.++.|+++.......+|.+.. ...+..+
T Consensus 82 ~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~ 161 (255)
T 3qqz_A 82 QFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHIS 161 (255)
T ss_dssp EEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEE
T ss_pred EEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeee
Confidence 8777765678899988765432 1221 12345679999999998888777655555555531 1112222
Q ss_pred e-------cccCCeEEEEeeCC-CeEE-EEeCCCcEEEEecCCCeeeEEecC---------CCCeeEEEeecCCeEEEEe
Q 010296 301 F-------GHQSEVLTIDCLRK-ERVL-TVGRDRSMQLWKVPEESRLVFRAP---------ASSLECCCFISNDEFLSGS 362 (513)
Q Consensus 301 ~-------~~~~~v~~~~~~~~-~~~~-~~~~d~~i~iwd~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~~~~ 362 (513)
. .+...+.++++.|. +.++ .....+.|.++|........+... ......++|.++|.+...+
T Consensus 162 ~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 162 KDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp ECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred cchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 1 12335688999985 5665 444678888999876533322222 1356789999999877778
Q ss_pred CCCCEEEEec
Q 010296 363 DDGSIELWSL 372 (513)
Q Consensus 363 ~dg~i~iwd~ 372 (513)
.-+.+++|.-
T Consensus 242 E~n~~y~f~~ 251 (255)
T 3qqz_A 242 EPNRFYRFTP 251 (255)
T ss_dssp TTTEEEEEEC
T ss_pred CCceEEEEEe
Confidence 7776666653
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.59 E-value=0.00027 Score=65.49 Aligned_cols=236 Identities=9% Similarity=-0.045 Sum_probs=144.1
Q ss_pred CCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE
Q 010296 159 RQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG 238 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 238 (513)
....+|.+..++ .+|+.+. ...|+..++........+ .....+..++|++....|+..
T Consensus 33 ~d~~~C~~~~~~-~~ll~~~-~~~I~~i~~~g~~~~~~~--------------------~~~~~~~~l~~d~~~~~ly~~ 90 (349)
T 3v64_C 33 PDRRSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLL--------------------NNLENAIALDFHHRRELVFWS 90 (349)
T ss_dssp TTSSCEEESSSC-CEEEEEC-BSCEEEECTTSCCEEEEE--------------------CSCSCEEEEEEETTTTEEEEE
T ss_pred CCCCcccccccC-ceeEeec-ccceEEEeCCCCeeEEee--------------------cCCCceEEEEEeccccEEEEE
Confidence 445677777774 3444443 345777777654432211 123347899999865555544
Q ss_pred -eCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEE-EEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeC-C
Q 010296 239 -GLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELF-SGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLR-K 315 (513)
Q Consensus 239 -~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~ 315 (513)
...+.|..+++........+.........+++.+.+..|+ +-...+.|.+.++........+.........+++.| .
T Consensus 91 D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~ 170 (349)
T 3v64_C 91 DVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPME 170 (349)
T ss_dssp ETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTT
T ss_pred eccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCc
Confidence 4678899999886654443333334567899998665555 555578899999876543333333445678999998 4
Q ss_pred CeEEEEe-CC-CcEEEEecCCCeeeEEe-cCCCCeeEEEeecC-CeE-EEEeCCCCEEEEecCCCCeeEEeecCCCcccC
Q 010296 316 ERVLTVG-RD-RSMQLWKVPEESRLVFR-APASSLECCCFISN-DEF-LSGSDDGSIELWSLLRKKPVYIVKNAHPLLDG 390 (513)
Q Consensus 316 ~~~~~~~-~d-~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~-~~~-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 390 (513)
+.++.+. .. +.|..+++.......+. ........+++++. +.| ++-...+.|..+++........+...
T Consensus 171 g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~------ 244 (349)
T 3v64_C 171 GTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG------ 244 (349)
T ss_dssp TEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS------
T ss_pred CeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC------
Confidence 5665444 34 77888888765443332 23445778999974 454 45556778999987654332222111
Q ss_pred CCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 391 LKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 391 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
......|++ ..+.++++-...+.|..++..++
T Consensus 245 -------------------------------~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 245 -------------------------------LPHPFAITV-FEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp -------------------------------CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred -------------------------------CCCceEEEE-ECCEEEEecCCCCeEEEEEccCC
Confidence 112567777 34556666666777888875454
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.58 E-value=3.6e-05 Score=73.56 Aligned_cols=153 Identities=4% Similarity=-0.063 Sum_probs=97.5
Q ss_pred CCeEEEEECC-CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE
Q 010296 160 QSVTAVALSE-DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG 238 (513)
Q Consensus 160 ~~V~~~~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 238 (513)
.....|+++| ++..|+.+...+.|+.+|+.++...... ........|+|++++++|+++
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~--------------------~~~~~P~~ia~d~~G~~lyva 196 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY--------------------SGLSKVRTICWTHEADSMIIT 196 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE--------------------CCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe--------------------cCCCCcceEEEeCCCCEEEEE
Confidence 3568899998 4566666655588999998876543322 123458899999999966666
Q ss_pred eCC-C----cEEEEeCCCccee--eeccCcCCCeEEEEEec-CCCeEEEEeCCCcEEEEeCCCCceeEEee-cccCCeEE
Q 010296 239 GLD-R----HIHLWDTRIQEHI--QAFPGHRGPVSCLTFRQ-GTSELFSGSFDRTVKIWNAEDRAYISTLF-GHQSEVLT 309 (513)
Q Consensus 239 ~~d-g----~i~vwd~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~ 309 (513)
... + .+.+++ ..+... ..+. .......++++| ++.++++-...+.|..++..++....... +.......
T Consensus 197 d~~~~~~~~~v~~~~-~~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~g 274 (430)
T 3tc9_A 197 NDQNNNDRPNNYILT-RESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFH 274 (430)
T ss_dssp ECCSCTTSEEEEEEE-GGGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEE
T ss_pred eCCCCcccceEEEEe-CCCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCccee
Confidence 542 2 233344 333222 2222 123456788999 66655565667899999998765422222 12235688
Q ss_pred EEeeCCCe-EEEEe-CCCcEEEEecCC
Q 010296 310 IDCLRKER-VLTVG-RDRSMQLWKVPE 334 (513)
Q Consensus 310 ~~~~~~~~-~~~~~-~d~~i~iwd~~~ 334 (513)
++++|++. ++.+. ..+.|..++...
T Consensus 275 ia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 275 IQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 99999986 55444 578899987653
No 271
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.53 E-value=5.2e-05 Score=70.41 Aligned_cols=249 Identities=10% Similarity=0.042 Sum_probs=126.3
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcce--eeecc---CcCCCeEEEEEecC---CCeEEEEeCC------CcEE
Q 010296 222 HILALAVSSDGRYLASGGLDRHIHLWDTRIQEH--IQAFP---GHRGPVSCLTFRQG---TSELFSGSFD------RTVK 287 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~d------g~i~ 287 (513)
....|+|.|+|+++++ ...|.|++++ .+.. +..+. ........|+|+|+ +..|+++... +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4678999999985555 5569999998 3332 22221 22456889999998 5566654432 6788
Q ss_pred EEeCCCCce-----e-EEee---cccCCeEEEEeeCCCeEEEEeCC--------------CcEEEEecCCC---------
Q 010296 288 IWNAEDRAY-----I-STLF---GHQSEVLTIDCLRKERVLTVGRD--------------RSMQLWKVPEE--------- 335 (513)
Q Consensus 288 iwd~~~~~~-----~-~~~~---~~~~~v~~~~~~~~~~~~~~~~d--------------~~i~iwd~~~~--------- 335 (513)
.|++..... + ..+. ........++|.|++.|+++..+ +.|..++....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 888764321 1 1122 11123468899999987755322 45666655431
Q ss_pred ----eeeEEecCCCCeeEEEeec-CCeEEEEeCC-CCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCC
Q 010296 336 ----SRLVFRAPASSLECCCFIS-NDEFLSGSDD-GSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENG 409 (513)
Q Consensus 336 ----~~~~~~~~~~~v~~~~~~~-~~~~~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 409 (513)
....+.........++|.| .+.|.++... ..+. + .....+..+....... ....... ....+
T Consensus 189 ~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~--~-~~~dei~~i~~G~nyG--wp~~~g~-------~~~~~ 256 (352)
T 2ism_A 189 RRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQ--G-YGHDEVNLIVPGGNYG--WPRVVGR-------GNDPR 256 (352)
T ss_dssp CTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC---------CCCEEEEECTTCBCC--TTTCCSC-------CCCTT
T ss_pred CCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCC--C-CCCeEEEEeccCCcCC--CCcccCC-------CCCCC
Confidence 1111111122345677777 5555443322 1111 1 1112233322111000 0000000 00000
Q ss_pred CCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcc-----eeeeeecCcccEEEEEEeecCCCEEEE
Q 010296 410 NLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKD-----IQPLYNLPLVGFVNSLAFAKSGQFLIA 484 (513)
Q Consensus 410 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~-----~~~~~~~~~~~~v~~v~~sp~~~~l~~ 484 (513)
...+. +. .........++| .+|.++++.-..+.|...++...... ...+. .....+..|++.|||.++++
T Consensus 257 ~~~p~-~~-~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~--~~~~rp~~v~~~pdG~lyv~ 331 (352)
T 2ism_A 257 YRDPL-YF-WPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL--SGFGRLREVQVGPDGALYVT 331 (352)
T ss_dssp SCCCS-EE-CTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE--ESSCCEEEEEECTTSCEEEE
T ss_pred CcCCe-Ee-cCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec--ccCCCeeEEEECCCCcEEEE
Confidence 00000 00 011223567777 46777777767778888887654221 11111 12457899999999988887
Q ss_pred EecCCC
Q 010296 485 GVGQEP 490 (513)
Q Consensus 485 ~~~~dg 490 (513)
..+.+|
T Consensus 332 ~~~~~g 337 (352)
T 2ism_A 332 TSNRDG 337 (352)
T ss_dssp ECSTTT
T ss_pred EeCCCC
Confidence 745555
No 272
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.52 E-value=7.1e-05 Score=71.55 Aligned_cols=251 Identities=7% Similarity=0.019 Sum_probs=140.3
Q ss_pred CCeEEEEECCC--CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEE
Q 010296 160 QSVTAVALSED--DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLAS 237 (513)
Q Consensus 160 ~~V~~~~~s~~--~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 237 (513)
....+|+|+|+ ...|+.+...+.|+.++..++...... ........|+|+++|+++++
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~--------------------~~~~~P~giavd~dG~lyVa 198 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT--------------------TNIGQCADVNFTLNGDMVVV 198 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC--------------------CCCSCEEEEEECTTCCEEEE
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee--------------------cCCCCccEEEECCCCCEEEE
Confidence 35678999994 445555544489999998777654322 12345889999999994444
Q ss_pred EeCC---C-cEEEEeCCCcce-eeeccCcCCCeEEEEEec-CCCeEEEEeCCCcEEEEeCCCCceeEEeec--ccCCeEE
Q 010296 238 GGLD---R-HIHLWDTRIQEH-IQAFPGHRGPVSCLTFRQ-GTSELFSGSFDRTVKIWNAEDRAYISTLFG--HQSEVLT 309 (513)
Q Consensus 238 ~~~d---g-~i~vwd~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~ 309 (513)
.... . .+...+...+.. ...+. .......++++| ++.++++-..++.|+.++..++.....+.. .......
T Consensus 199 d~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ 277 (433)
T 4hw6_A 199 DDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFH 277 (433)
T ss_dssp ECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEE
T ss_pred cCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCccc
Confidence 4321 1 233333222111 01111 223456788999 555555555678899999987765333221 1223357
Q ss_pred EEeeCCCe-EEEEe-CCCcEEEEecCC--Cee---eEEecC---------------CCCeeEEEe---------ecCCeE
Q 010296 310 IDCLRKER-VLTVG-RDRSMQLWKVPE--ESR---LVFRAP---------------ASSLECCCF---------ISNDEF 358 (513)
Q Consensus 310 ~~~~~~~~-~~~~~-~d~~i~iwd~~~--~~~---~~~~~~---------------~~~v~~~~~---------~~~~~~ 358 (513)
++++|++. ++.+. ..+.|+.+++.. +.. ..+.+. ......+++ .+++.|
T Consensus 278 ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~l 357 (433)
T 4hw6_A 278 IVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDF 357 (433)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEE
T ss_pred EEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcE
Confidence 99999885 55544 567899977652 211 111111 123556788 566665
Q ss_pred E-EEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEe-cCCCE
Q 010296 359 L-SGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVC-GGSDL 436 (513)
Q Consensus 359 ~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~~ 436 (513)
+ +-...+.|+.++. ++. +.++....... ...+ ..+. ............|+++ ++|.+
T Consensus 358 yvaD~~n~~I~~~~~-~G~-v~t~~G~g~~~--~~G~------------~dG~-----~~~~~~~~~P~giavd~~~g~l 416 (433)
T 4hw6_A 358 YFCDRDSHTVRVLTP-EGR-VTTYAGRGNSR--EWGY------------VDGE-----LRSQALFNHPTSIAYDMKRKCF 416 (433)
T ss_dssp EEEETTTTEEEEECT-TSE-EEEEECCCTTC--SSCC------------BCEE-----TTTTCBCSSEEEEEEETTTTEE
T ss_pred EEEECCCCEEEEECC-CCC-EEEEEeCCCCC--cccc------------CCCc-----cccccEeCCCcEEEEECCCCEE
Confidence 4 4455678888874 443 33332211100 0000 0000 0001122337899999 67777
Q ss_pred EEEecCCCcEEEEEeC
Q 010296 437 AASGAGNGSVRLWAIE 452 (513)
Q Consensus 437 l~~g~~dg~v~vwd~~ 452 (513)
+++-..++.|+.+++.
T Consensus 417 yVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 417 YIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEGGGTEEEEEEEC
T ss_pred EEEeCCCCEEEEEecC
Confidence 7777777889888764
No 273
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.51 E-value=0.00053 Score=64.50 Aligned_cols=234 Identities=10% Similarity=-0.042 Sum_probs=143.4
Q ss_pred CeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEE-EEe
Q 010296 161 SVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLA-SGG 239 (513)
Q Consensus 161 ~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~ 239 (513)
.-+|.+..+. .+|+.+. ...|+.+++.+......+ .....+..++|++.+..|+ +-.
T Consensus 78 ~~~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~~~--------------------~~~~~~~gl~~d~~~~~ly~~D~ 135 (386)
T 3v65_B 78 RRSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLL--------------------NNLENAIALDFHHRRELVFWSDV 135 (386)
T ss_dssp SSCEEECSSC-CEEEEEC-BSCEEEECTTSCCCEEEE--------------------CSCSCEEEEEEETTTTEEEEEET
T ss_pred CCeECCcccc-ceeEeec-CccceeeccCCCcEEEEe--------------------cCCCccEEEEEecCCCeEEEEeC
Confidence 3456666553 3444443 356888887765433221 1233478999998655554 445
Q ss_pred CCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEE-EEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeCC-Ce
Q 010296 240 LDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELF-SGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRK-ER 317 (513)
Q Consensus 240 ~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~ 317 (513)
..+.|+.+++........+.........+++.+.+..|+ +-...+.|.+.++........+.........+++.|. +.
T Consensus 136 ~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ 215 (386)
T 3v65_B 136 TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGT 215 (386)
T ss_dssp TTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred CCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCe
Confidence 678899999887654444433334567889998666555 4455678999888755433333334456789999974 55
Q ss_pred EEEEe-CC-CcEEEEecCCCeeeEEe-cCCCCeeEEEeecC-CeE-EEEeCCCCEEEEecCCCCeeEEeecCCCcccCCC
Q 010296 318 VLTVG-RD-RSMQLWKVPEESRLVFR-APASSLECCCFISN-DEF-LSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLK 392 (513)
Q Consensus 318 ~~~~~-~d-~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~-~~~-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 392 (513)
++.+. .. +.|..+++.......+. ........+++++. +.| ++-+..+.|..+++........+...
T Consensus 216 ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~-------- 287 (386)
T 3v65_B 216 IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG-------- 287 (386)
T ss_dssp EEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS--------
T ss_pred EEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC--------
Confidence 55444 33 67888888765444332 33445788999964 454 45566778988887654332222211
Q ss_pred CcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 393 NFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 393 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
......|++ ..+.++++-...+.|..++..++
T Consensus 288 -----------------------------~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 288 -----------------------------LPHPFAITV-FEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp -----------------------------CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred -----------------------------CCCceEEEE-ECCEEEEeeCCCCeEEEEECCCC
Confidence 112667777 34556666667788888885555
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.50 E-value=0.00088 Score=63.29 Aligned_cols=226 Identities=8% Similarity=-0.059 Sum_probs=139.4
Q ss_pred CeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE-eCCCcEEEEeCC
Q 010296 172 SKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG-GLDRHIHLWDTR 250 (513)
Q Consensus 172 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~i~vwd~~ 250 (513)
.+|+.+. ...|+..++........+ .....+..|+|++....|+.. ...+.|+.+++.
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~~~--------------------~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~ 142 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTSLI--------------------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLD 142 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEEEE--------------------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-
T ss_pred ceeEEec-cceeEEEccCCcceeEec--------------------cccCcceEEeeeeccCceEEEecCCCeEEEEEcc
Confidence 3444444 367888888765433221 234568899999866555554 456889999886
Q ss_pred Cc----ceeeeccCcCCCeEEEEEecCCCeEE-EEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeC-CCeEEEEeC-
Q 010296 251 IQ----EHIQAFPGHRGPVSCLTFRQGTSELF-SGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLR-KERVLTVGR- 323 (513)
Q Consensus 251 ~~----~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~- 323 (513)
.. .....+.........|++.+.+..|+ +-...+.|.+.++........+.........|++.| .+.++.+..
T Consensus 143 g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~ 222 (400)
T 3p5b_L 143 RAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG 222 (400)
T ss_dssp -----CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECS
T ss_pred cCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCC
Confidence 52 22333333445678999998555555 545678899999976654444443445678999998 456665542
Q ss_pred -CCcEEEEecCCCeeeEE-ecCCCCeeEEEeecCC-eEE-EEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcC
Q 010296 324 -DRSMQLWKVPEESRLVF-RAPASSLECCCFISND-EFL-SGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEG 399 (513)
Q Consensus 324 -d~~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~-~~~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (513)
.+.|...++.......+ .........+++.+.+ .|. +-...+.|..+++........+....
T Consensus 223 ~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~-------------- 288 (400)
T 3p5b_L 223 TPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-------------- 288 (400)
T ss_dssp SSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSS--------------
T ss_pred CCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCC--------------
Confidence 47888888876554433 3334567889999754 544 55567789999986544333322110
Q ss_pred ccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 400 KISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 400 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
.......|++. .+.++++-...+.|..++..++
T Consensus 289 ---------------------~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 289 ---------------------RLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp ---------------------TTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSC
T ss_pred ---------------------CCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCC
Confidence 01114566663 3455666667788888886665
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.48 E-value=0.00073 Score=61.60 Aligned_cols=225 Identities=10% Similarity=0.008 Sum_probs=134.4
Q ss_pred EEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEE-eCCCcEEEEeCCC----CceeEEeecccCCeE
Q 010296 234 YLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSG-SFDRTVKIWNAED----RAYISTLFGHQSEVL 308 (513)
Q Consensus 234 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~----~~~~~~~~~~~~~v~ 308 (513)
+|+.+. ...|+..++.+......+. ....+..++|++.+..|+.+ ...+.|..+++.+ ......+........
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 344444 3568999998876655554 34567899999877666654 4568999999876 222222222224557
Q ss_pred EEEeeC-CCeEEEE-eCCCcEEEEecCCCeeeEE-ecCCCCeeEEEeec-CCeEE-EEeCC-CCEEEEecCCCCeeEEee
Q 010296 309 TIDCLR-KERVLTV-GRDRSMQLWKVPEESRLVF-RAPASSLECCCFIS-NDEFL-SGSDD-GSIELWSLLRKKPVYIVK 382 (513)
Q Consensus 309 ~~~~~~-~~~~~~~-~~d~~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~-~~~~d-g~i~iwd~~~~~~~~~~~ 382 (513)
.+++.+ .+.++.+ ...+.|.++++.......+ .........+++.| .+.++ +.... +.|..+++.... ...+.
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~ 159 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLV 159 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEE
Confidence 888875 5566544 5678999999876544433 23445678899997 45544 43333 677777765332 22221
Q ss_pred cCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEe-cCCCcEEEEEeCCCCcceeee
Q 010296 383 NAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASG-AGNGSVRLWAIESETKDIQPL 461 (513)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g-~~dg~v~vwd~~~~~~~~~~~ 461 (513)
.. ...+...|+++|++..|+.+ +..+.|..+++... ....+
T Consensus 160 ~~------------------------------------~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~--~~~~~ 201 (316)
T 1ijq_A 160 TE------------------------------------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTI 201 (316)
T ss_dssp CS------------------------------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEE
T ss_pred EC------------------------------------CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC--ceEEE
Confidence 10 11237899999876666554 46678999998753 22333
Q ss_pred eec-CcccEEEEEEeecCCCEEEEEecCCCcccccccCCCc
Q 010296 462 YNL-PLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPAA 501 (513)
Q Consensus 462 ~~~-~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~~ 501 (513)
... ........+++. . ..|+.+-...++|..++...+.
T Consensus 202 ~~~~~~~~~P~giav~-~-~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 202 LEDEKRLAHPFSLAVF-E-DKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EECTTTTSSEEEEEEE-T-TEEEEEETTTTEEEEEETTTCC
T ss_pred eecCCccCCcEEEEEE-C-CEEEEEECCCCeEEEEeCCCCc
Confidence 221 122335667774 3 4555554667788888765443
No 276
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.45 E-value=5.3e-05 Score=78.16 Aligned_cols=150 Identities=7% Similarity=-0.011 Sum_probs=90.7
Q ss_pred cEEEEEEc-CCCCEEEEEeC-CC----cEEEEeCCCc-ceeee-ccCcCCCeEEEEEecCCCeEEEEeCC-----CcEEE
Q 010296 222 HILALAVS-SDGRYLASGGL-DR----HIHLWDTRIQ-EHIQA-FPGHRGPVSCLTFRQGTSELFSGSFD-----RTVKI 288 (513)
Q Consensus 222 ~v~~~~~s-~~~~~l~s~~~-dg----~i~vwd~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i 288 (513)
.+...+|| |||++||.+.. +| .|+++|+.++ +.+.. +. .....++|+|+++.|+....+ ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 68889999 99998886543 22 5999999988 63221 11 113468999999988876654 36888
Q ss_pred EeCCCCce--eEEee-cccCCeEEEEeeCCCeEE-EEe---CCCcEEEEecCCC--ee--eEEec-CCCCeeEEEeecCC
Q 010296 289 WNAEDRAY--ISTLF-GHQSEVLTIDCLRKERVL-TVG---RDRSMQLWKVPEE--SR--LVFRA-PASSLECCCFISND 356 (513)
Q Consensus 289 wd~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~~-~~~---~d~~i~iwd~~~~--~~--~~~~~-~~~~v~~~~~~~~~ 356 (513)
+++.++.. ...+. ........+.|+|+++.+ ..+ ....|+++++.++ .. ..+.. .......+.|+.++
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 99887642 22222 223345678899998544 332 2456888888764 22 22222 23344455555556
Q ss_pred eEE-EEeCC--C--CEEEEecCC
Q 010296 357 EFL-SGSDD--G--SIELWSLLR 374 (513)
Q Consensus 357 ~~~-~~~~d--g--~i~iwd~~~ 374 (513)
.|+ ....+ + .|..+++.+
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTS
T ss_pred EEEEEeCCCCCCCcEEEEEcCCC
Confidence 654 33333 2 455555543
No 277
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.45 E-value=0.00049 Score=63.10 Aligned_cols=193 Identities=9% Similarity=0.036 Sum_probs=108.1
Q ss_pred CCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE
Q 010296 159 RQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG 238 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 238 (513)
...+.+|.|++ +. ++.++..+.|.. ..+.++.-..+. ....+...+..|.+.+++..++++
T Consensus 79 ~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~tW~~~~----------------~~~~~~~~~~~i~~~~~~~~~~~~ 139 (327)
T 2xbg_A 79 DYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQSWSQIP----------------LDPKLPGSPRLIKALGNGSAEMIT 139 (327)
T ss_dssp CCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTSSCEECC----------------CCTTCSSCEEEEEEEETTEEEEEE
T ss_pred CccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCCCceECc----------------cccCCCCCeEEEEEECCCCEEEEe
Confidence 44688999986 34 444555665543 333333222110 001122346788887777766665
Q ss_pred eCCCcEEEEeCCCccee-eeccCcCCCeEEEEEecCCCeEEEEeCCCcEEE-EeC--CCCceeEEeecccCCeEEEEeeC
Q 010296 239 GLDRHIHLWDTRIQEHI-QAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKI-WNA--EDRAYISTLFGHQSEVLTIDCLR 314 (513)
Q Consensus 239 ~~dg~i~vwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i-wd~--~~~~~~~~~~~~~~~v~~~~~~~ 314 (513)
. +|.|..- ...++.- .....+...+..+.+.+++.+++++. .|.|.. +|- .+-+.+ -......+..+.+.+
T Consensus 140 ~-~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~ 214 (327)
T 2xbg_A 140 N-VGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTP 214 (327)
T ss_dssp T-TCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECT
T ss_pred C-CccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeEC--CCCCCCccceeEECC
Confidence 4 5554332 2223222 22233556789999999887776664 454443 442 122222 123456788888989
Q ss_pred CCeEEEEeCCCcEEEEecCCCeeeE-Eec----CCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCC
Q 010296 315 KERVLTVGRDRSMQLWKVPEESRLV-FRA----PASSLECCCFISNDEFLSGSDDGSIELWSLLRKK 376 (513)
Q Consensus 315 ~~~~~~~~~d~~i~iwd~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~ 376 (513)
++.+++++.+|.+++.....+.... ... ....+..+.+.+++.+++++.+|.| ++....++
T Consensus 215 ~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~ 280 (327)
T 2xbg_A 215 DGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQ 280 (327)
T ss_dssp TSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTS
T ss_pred CCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCc
Confidence 9988888888888776422222221 111 1235778888887777766677876 34444443
No 278
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.45 E-value=6e-06 Score=83.99 Aligned_cols=245 Identities=11% Similarity=0.099 Sum_probs=131.4
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------cEEEEeCCCcceee--ecc-CcCCCeEEEEEecCCCeEEEEeC-CCcEEE
Q 010296 225 ALAVSS-DGRYLASGGLDR-----------HIHLWDTRIQEHIQ--AFP-GHRGPVSCLTFRQGTSELFSGSF-DRTVKI 288 (513)
Q Consensus 225 ~~~~s~-~~~~l~s~~~dg-----------~i~vwd~~~~~~~~--~~~-~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i 288 (513)
++++.+ ++++++.|+.+. .+.+||+.+++... .+. .+.....++++..+++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556777 888888887543 58899998776432 222 13333456788889999998884 568999
Q ss_pred EeCCCCceeEEeecccCC-eEEEEeeCCCeEE-EEe-CC-----CcEEEEecCCCeeeEEecC-----CCCeeEEEeecC
Q 010296 289 WNAEDRAYISTLFGHQSE-VLTIDCLRKERVL-TVG-RD-----RSMQLWKVPEESRLVFRAP-----ASSLECCCFISN 355 (513)
Q Consensus 289 wd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~-~~~-~d-----~~i~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~ 355 (513)
||..+.+....-..+... -.++...++++++ .++ .+ ..+.+||..+..-...... ...-....+..+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence 999877544322212222 1344555677665 555 23 5689999987764433110 000000112233
Q ss_pred Ce-EEEEeCCC---------CEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceE
Q 010296 356 DE-FLSGSDDG---------SIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWV 425 (513)
Q Consensus 356 ~~-~~~~~~dg---------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i 425 (513)
+. ++.|+.+| .+..||..+............. . +. ......-
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~-~-------------------~~--------~~~~~~~ 401 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSN-R-------------------GV--------APDAMCG 401 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEET-T-------------------EE--------CCCCBTC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccc-c-------------------cc--------CCCCCCC
Confidence 33 45555554 4566776665433221110000 0 00 0000012
Q ss_pred EEEEEec-CCCEEEEecCCC-----------cEEEEEeCCCCcceeeee--ecCcccEEEEEEeecCCCEEEEEecCC--
Q 010296 426 SSVTVCG-GSDLAASGAGNG-----------SVRLWAIESETKDIQPLY--NLPLVGFVNSLAFAKSGQFLIAGVGQE-- 489 (513)
Q Consensus 426 ~~~~~s~-~~~~l~~g~~dg-----------~v~vwd~~~~~~~~~~~~--~~~~~~~v~~v~~sp~~~~l~~~~~~d-- 489 (513)
.++.|.. +++++++|+.++ .|.+||..+. ....+. ..+....-.+++..|+|++++.++...
T Consensus 402 ~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~ 479 (656)
T 1k3i_A 402 NAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS--PNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI 479 (656)
T ss_dssp EEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC--CEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC
T ss_pred ceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC--CeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc
Confidence 3444443 678888887543 5777777665 222222 222222234456678999999984321
Q ss_pred --------CcccccccCC
Q 010296 490 --------PRLGRWGHLP 499 (513)
Q Consensus 490 --------g~v~~W~~~~ 499 (513)
..+.+||...
T Consensus 480 ~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 480 PFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp TTCCCSBCCCCEEEEGGG
T ss_pred CcCCCCcccceEEEcCCC
Confidence 3566776543
No 279
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.45 E-value=0.0011 Score=66.24 Aligned_cols=209 Identities=6% Similarity=-0.036 Sum_probs=127.9
Q ss_pred ccCCCeEEEEECCCCCeEEEEe-CCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEE
Q 010296 157 KHRQSVTAVALSEDDSKGFSAS-KDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYL 235 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~t~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 235 (513)
..-..+.+|+|++.+..|+.+. ..+.|..+++........+ ..........|++.+.+..|
T Consensus 37 ~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v------------------~~~~~~~P~GlAvD~~~~~l 98 (619)
T 3s94_A 37 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV------------------VVSGLLSPDGLACDWLGEKL 98 (619)
T ss_dssp BCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEE------------------ECSSCSCEEEEEEETTTTEE
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEE------------------EeCCCCCcCeEEEEecCCEE
Confidence 3455678999999777666554 4678888888765321111 01112457889999855544
Q ss_pred -EEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeC--CCcEEEEeCCCCceeEEeecccCCeEEEEe
Q 010296 236 -ASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSF--DRTVKIWNAEDRAYISTLFGHQSEVLTIDC 312 (513)
Q Consensus 236 -~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 312 (513)
++-...+.|.+.++........+...-.....|++.|.+.+|+.+.. .+.|...++............-.....|++
T Consensus 99 y~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glal 178 (619)
T 3s94_A 99 YWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTL 178 (619)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEE
T ss_pred EEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEE
Confidence 45556789999998755433333334456778999998777766554 467777777644333333333456788999
Q ss_pred eCC-CeEEEEe-CCCcEEEEecCCCeeeEEec-CCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeec
Q 010296 313 LRK-ERVLTVG-RDRSMQLWKVPEESRLVFRA-PASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKN 383 (513)
Q Consensus 313 ~~~-~~~~~~~-~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~ 383 (513)
.+. ++|+.+. ..+.|..+++.......+.. .......+++..+..+++-...+.|...|..+++....+..
T Consensus 179 d~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~ 252 (619)
T 3s94_A 179 DYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHS 252 (619)
T ss_dssp ETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECCS
T ss_pred EccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEec
Confidence 875 5666544 56789999987655443222 22233456666663455666788999999888876665543
No 280
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.44 E-value=0.00091 Score=60.96 Aligned_cols=225 Identities=8% Similarity=-0.060 Sum_probs=135.6
Q ss_pred eEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEE-EEeCCCcEEEEeCCC
Q 010296 173 KGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLA-SGGLDRHIHLWDTRI 251 (513)
Q Consensus 173 ~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~i~vwd~~~ 251 (513)
+|+.+.. ..|+..++.+......+ .....+..++|++.+..|+ +-...+.|..+++..
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~--------------------~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g 61 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLI--------------------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDR 61 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEE--------------------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--
T ss_pred EEEEECC-CeEEEEECCCcceEehh--------------------cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCC
Confidence 3444443 56888888876543322 1234578999998665554 445568999999875
Q ss_pred ----cceeeeccCcCCCeEEEEEecCCCeEE-EEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeC-CCeEEEEeCC-
Q 010296 252 ----QEHIQAFPGHRGPVSCLTFRQGTSELF-SGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLR-KERVLTVGRD- 324 (513)
Q Consensus 252 ----~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~d- 324 (513)
......+.........+++.+.+..|+ +-...+.|.++++........+.........+++.| .+.++.+...
T Consensus 62 ~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~ 141 (316)
T 1ijq_A 62 AHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT 141 (316)
T ss_dssp ------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS
T ss_pred CCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCC
Confidence 222222332334567899987665555 445678999999876543333333445678999998 5666655543
Q ss_pred -CcEEEEecCCCeeeEE-ecCCCCeeEEEeecCC-eE-EEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCc
Q 010296 325 -RSMQLWKVPEESRLVF-RAPASSLECCCFISND-EF-LSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGK 400 (513)
Q Consensus 325 -~~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~-~~-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (513)
+.|..+++.......+ .........+++.+.+ .| ++-...+.|..+++..... ..+.....
T Consensus 142 ~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~-~~~~~~~~-------------- 206 (316)
T 1ijq_A 142 PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEK-------------- 206 (316)
T ss_dssp SCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTT--------------
T ss_pred CCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce-EEEeecCC--------------
Confidence 6888888865544333 2334567789999754 54 4555677899999875332 22211100
Q ss_pred cccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 401 ISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 401 i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
.......+++. .+.++++-...+.|..++..++
T Consensus 207 --------------------~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 207 --------------------RLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp --------------------TTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred --------------------ccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCC
Confidence 00115667775 3556666666778888887655
No 281
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.42 E-value=0.00011 Score=70.23 Aligned_cols=150 Identities=7% Similarity=-0.009 Sum_probs=98.3
Q ss_pred cEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCC-C----cEEEEeCCCCc
Q 010296 222 HILALAVSS-DGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFD-R----TVKIWNAEDRA 295 (513)
Q Consensus 222 ~v~~~~~s~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g----~i~iwd~~~~~ 295 (513)
....|+++| ++..|+++...+.|+.+|+..+....... .......|+|++++++|+++... + .+.+++. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 467899998 45566666555889999988766544433 45668899999999977666542 2 2333443 232
Q ss_pred ee--EEeecccCCeEEEEeeC-CCeEEEEe-CCCcEEEEecCCCeeeE-E-ecCCCCeeEEEeecCCe-E-EEEeCCCCE
Q 010296 296 YI--STLFGHQSEVLTIDCLR-KERVLTVG-RDRSMQLWKVPEESRLV-F-RAPASSLECCCFISNDE-F-LSGSDDGSI 367 (513)
Q Consensus 296 ~~--~~~~~~~~~v~~~~~~~-~~~~~~~~-~d~~i~iwd~~~~~~~~-~-~~~~~~v~~~~~~~~~~-~-~~~~~dg~i 367 (513)
.. ..+. .......+++.| ++.++++. ..+.|..|+........ . .........++++|++. + ++-...+.|
T Consensus 216 ~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 216 FKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp SCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 22 2222 233457788899 77777655 56889999988765522 2 22224577899999986 4 455567889
Q ss_pred EEEecCC
Q 010296 368 ELWSLLR 374 (513)
Q Consensus 368 ~iwd~~~ 374 (513)
..++...
T Consensus 295 ~~~~~d~ 301 (430)
T 3tc9_A 295 LRSDYDW 301 (430)
T ss_dssp EEEEEET
T ss_pred EEEeCCc
Confidence 9887653
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.41 E-value=0.00087 Score=63.30 Aligned_cols=208 Identities=11% Similarity=0.013 Sum_probs=134.8
Q ss_pred ccCCCeEEEEECCCCCeEEEE-eCCceEEEEeCCCCcc---ccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC-
Q 010296 157 KHRQSVTAVALSEDDSKGFSA-SKDGSILHWDVSSGKG---VKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD- 231 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~t~-~~dg~v~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~- 231 (513)
.....+..|+|++....|+.. ...+.|+.+++..... ...+ ..........|++.+.
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~------------------~~~~~~~p~glavD~~~ 170 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV------------------ISRDIQAPDGLAVDWIH 170 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEE------------------ECSSCSCEEEEEEETTT
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEE------------------EeCCCCCcccEEEEecC
Confidence 345678999999876666544 4568898888875321 1111 1112345778999884
Q ss_pred CCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeC--CCcEEEEeCCCCceeEEeecccCCeEE
Q 010296 232 GRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSF--DRTVKIWNAEDRAYISTLFGHQSEVLT 309 (513)
Q Consensus 232 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~ 309 (513)
+++.++-...+.|.+.++........+.........|++.|.+.+|+.+.. .+.|...++........+...-.....
T Consensus 171 ~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~g 250 (400)
T 3p5b_L 171 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 250 (400)
T ss_dssp TEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEE
T ss_pred CceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEE
Confidence 555555556789999998766544444434456789999997777776553 478999988654433333333456789
Q ss_pred EEeeCC-CeEEEEe-CCCcEEEEecCCCeeeEEec---CCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEee
Q 010296 310 IDCLRK-ERVLTVG-RDRSMQLWKVPEESRLVFRA---PASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVK 382 (513)
Q Consensus 310 ~~~~~~-~~~~~~~-~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~ 382 (513)
|++.+. ++|+.+. ..+.|..+++.......+.. .......+++..+..+++-...+.|..++..+++.+..+.
T Consensus 251 lavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 251 ITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred EEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 999974 5666554 56789999987655443322 2344567777544446677778899999988887777665
No 283
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.40 E-value=0.00046 Score=63.94 Aligned_cols=245 Identities=10% Similarity=0.014 Sum_probs=124.8
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcc-eeeecc---CcCCCeEEEEEecC---CCeEEEEeC----C----CcE
Q 010296 222 HILALAVSSDGRYLASGGLDRHIHLWDTRIQE-HIQAFP---GHRGPVSCLTFRQG---TSELFSGSF----D----RTV 286 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d----g~i 286 (513)
....|+|.|+|+++++ ...|.|++++. .+. .+..+. ........|+|+|+ +..|+++.. + ..|
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 4788999999985554 55699999973 444 222221 12356889999997 556655443 2 567
Q ss_pred EEEeCCCC--c-----ee-EEeec-ccCCeEEEEeeCCCeEEEEeCC--------------CcEEEEecCCC--------
Q 010296 287 KIWNAEDR--A-----YI-STLFG-HQSEVLTIDCLRKERVLTVGRD--------------RSMQLWKVPEE-------- 335 (513)
Q Consensus 287 ~iwd~~~~--~-----~~-~~~~~-~~~~v~~~~~~~~~~~~~~~~d--------------~~i~iwd~~~~-------- 335 (513)
..|++... . .+ ..+.. .......|.|.|++.|+.+..+ +.|..++....
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 78877653 1 11 11221 1113467899999987755322 45555555432
Q ss_pred eeeEEecCCCCeeEEEeec-CCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCC
Q 010296 336 SRLVFRAPASSLECCCFIS-NDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPG 414 (513)
Q Consensus 336 ~~~~~~~~~~~v~~~~~~~-~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 414 (513)
....+.........++|.| .+.|.++.....- ...+..+...... ........ ....+...+.
T Consensus 188 ~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~-------~dei~~i~~G~ny--Gwp~~~g~-------~~~~~~~~p~ 251 (354)
T 3a9g_A 188 NSPIWSYGHRNPQGIDWHRASGVMVATEHGPVG-------HDEVNIILKGGNY--GWPLATGK-------AGRGEFVDPV 251 (354)
T ss_dssp TCCEEEECCSCCCEEEECTTTCCEEEEECCSSS-------CCEEEEECTTCBC--CTTTCCSC-------CCCTTSCCCS
T ss_pred CCcEEEEccCCcceEEEeCCCCCEEEEecCCCC-------CcEEEEecCCCcC--CCCcccCC-------CCCCCCcCCE
Confidence 0111111223345677887 5665544332210 1122222111000 00000000 0000000000
Q ss_pred CcCCCCCcceEEEEEEe-------cCCCEEEEecCCCcEEEEEeCCCCcceeeeeecC-cccEEEEEEeecCCCEEEEE
Q 010296 415 SYHSSSAYSWVSSVTVC-------GGSDLAASGAGNGSVRLWAIESETKDIQPLYNLP-LVGFVNSLAFAKSGQFLIAG 485 (513)
Q Consensus 415 ~~~~~~~~~~i~~~~~s-------~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~~l~~~ 485 (513)
+...........++|. .+|.++++.-..+.|...++............+. ....+..|++.|||.++++.
T Consensus 252 -~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 252 -IDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp -EECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred -eecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 0000112347788883 5677777777778898888875422211111111 24578999999999877766
No 284
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.39 E-value=0.00025 Score=64.60 Aligned_cols=206 Identities=6% Similarity=-0.027 Sum_probs=132.6
Q ss_pred CCeEEEEECCCCCeEE-EEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC-CCEEEE
Q 010296 160 QSVTAVALSEDDSKGF-SASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD-GRYLAS 237 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~-t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s 237 (513)
..+.+|+|++....|+ +-...+.|..+++.+......+ ..........+++.+. +.++++
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~------------------~~~~l~~p~glavd~~~g~ly~~ 96 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV------------------VVSGLLSPDGLACDWLGEKLYWT 96 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEE------------------EEECCSCCCEEEEETTTTEEEEE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEE------------------EcCCCCCccEEEEEcCCCeEEEE
Confidence 4567899998655554 5556788999998765321111 0011223567888874 445555
Q ss_pred EeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeC--CCcEEEEeCCCCceeEEeecccCCeEEEEeeC-
Q 010296 238 GGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSF--DRTVKIWNAEDRAYISTLFGHQSEVLTIDCLR- 314 (513)
Q Consensus 238 ~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~- 314 (513)
-...+.|.++++........+.........+++.|.+..|+.+.. .+.|...++........+...-.....+++.+
T Consensus 97 d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~ 176 (318)
T 3sov_A 97 DSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYE 176 (318)
T ss_dssp ETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETT
T ss_pred ECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEecc
Confidence 556788999998754433333344456789999997777776653 57888888864332222222334568999998
Q ss_pred CCeEEEEe-CCCcEEEEecCCCeeeEE-ecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeec
Q 010296 315 KERVLTVG-RDRSMQLWKVPEESRLVF-RAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKN 383 (513)
Q Consensus 315 ~~~~~~~~-~d~~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~ 383 (513)
.++++.+. ..+.|..+++.......+ .........+++..++.+++-...+.|..++..+++....+..
T Consensus 177 ~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 177 EQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 45666554 568899999875444333 2244556677776555566777788999999988877666653
No 285
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.34 E-value=0.0012 Score=57.51 Aligned_cols=202 Identities=9% Similarity=0.083 Sum_probs=128.7
Q ss_pred CCcccEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCcceeeeccC-cCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCc
Q 010296 218 KQSKHILALAVSSDGRYL-ASGGLDRHIHLWDTRIQEHIQAFPG-HRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRA 295 (513)
Q Consensus 218 ~~~~~v~~~~~s~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 295 (513)
+-...+..++|+|++..| ++...++.|...|+. ++.+..+.- -......|++.+++.++++.-.++.+.++++....
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 344569999999976654 457778899999987 887777642 23568889999888776776677889999876544
Q ss_pred e---eEEee------cccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCC----CeeeEEe-------cCCCCeeEEEeec
Q 010296 296 Y---ISTLF------GHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPE----ESRLVFR-------APASSLECCCFIS 354 (513)
Q Consensus 296 ~---~~~~~------~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~----~~~~~~~-------~~~~~v~~~~~~~ 354 (513)
. +.... ......-.++|.|.+ +|+++.......+|.+.. ....... .....+..+++.|
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp 182 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQ 182 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEET
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcC
Confidence 2 22221 123345899999976 777666554445555431 1111111 1234567889998
Q ss_pred CC-e-EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEec
Q 010296 355 ND-E-FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCG 432 (513)
Q Consensus 355 ~~-~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 432 (513)
.. + ++.......|.++|.. ++++..+........ + .......-.|+|.+
T Consensus 183 ~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~-l---------------------------~~~~~qpEGia~d~ 233 (255)
T 3qqz_A 183 QKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRG-L---------------------------SHNIKQAEGVAMDA 233 (255)
T ss_dssp TTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGG-C---------------------------SSCCCSEEEEEECT
T ss_pred CCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCC-c---------------------------ccccCCCCeeEECC
Confidence 65 4 5677778889999965 556666654321100 0 00112278899999
Q ss_pred CCCEEEEecCCCcEEEEE
Q 010296 433 GSDLAASGAGNGSVRLWA 450 (513)
Q Consensus 433 ~~~~l~~g~~dg~v~vwd 450 (513)
+|++.++ ++-+.++++.
T Consensus 234 ~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 234 SGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp TCCEEEE-ETTTEEEEEE
T ss_pred CCCEEEE-cCCceEEEEE
Confidence 9985555 6666666664
No 286
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.34 E-value=0.00031 Score=66.08 Aligned_cols=206 Identities=9% Similarity=-0.012 Sum_probs=132.6
Q ss_pred CCCeEEEEECCCCCeEE-EEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCE-EE
Q 010296 159 RQSVTAVALSEDDSKGF-SASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRY-LA 236 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~-t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~ 236 (513)
...+..++|++....|+ +-...+.|..+++.+......+ .........|++.+.+.. ++
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-------------------~~~~~~p~glavd~~~g~lY~ 175 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-------------------STGLESPGGLAVDWVHDKLYW 175 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE-------------------CSSCSCCCCEEEETTTTEEEE
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE-------------------eCCCCCccEEEEEeCCCeEEE
Confidence 45578899998665555 4456788999998765432221 011123456888875544 45
Q ss_pred EEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeC-C-CcEEEEeCCCCceeEEeecccCCeEEEEeeC
Q 010296 237 SGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSF-D-RTVKIWNAEDRAYISTLFGHQSEVLTIDCLR 314 (513)
Q Consensus 237 s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 314 (513)
+-...+.|.+.++........+.........|++.|.+..|+.+.. . +.|..+++............-.....|++.+
T Consensus 176 ~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~ 255 (386)
T 3v65_B 176 TDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDY 255 (386)
T ss_dssp EETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEG
T ss_pred EcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeC
Confidence 5555678999888755433334434456789999997777765544 3 6788888865433333333344578999996
Q ss_pred -CCeEEEEe-CCCcEEEEecCCCeeeE-EecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeec
Q 010296 315 -KERVLTVG-RDRSMQLWKVPEESRLV-FRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKN 383 (513)
Q Consensus 315 -~~~~~~~~-~d~~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~ 383 (513)
.++|+.+. ..+.|..+++....... ..........+++..+..+++-...+.|..++..+++.+..+..
T Consensus 256 ~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 256 AGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp GGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEcc
Confidence 45666544 56789999987654333 33334456778884443466777788899999777877777654
No 287
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.33 E-value=0.00059 Score=63.18 Aligned_cols=206 Identities=9% Similarity=-0.009 Sum_probs=131.7
Q ss_pred CCCeEEEEECCCCCeEE-EEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCC-EEE
Q 010296 159 RQSVTAVALSEDDSKGF-SASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGR-YLA 236 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~-t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~ 236 (513)
...+..++|++....|+ +-...+.|..+++.+......+ .........+++.+.+. +++
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-------------------~~~~~~p~glavd~~~g~ly~ 132 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-------------------STGLESPGGLAVDWVHDKLYW 132 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-------------------CSSCSCCCEEEEETTTTEEEE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE-------------------eCCCCCccEEEEecCCCeEEE
Confidence 34578999998666665 4456788999998765433211 11122356788887554 445
Q ss_pred EEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeC-C-CcEEEEeCCCCceeEEeecccCCeEEEEeeC
Q 010296 237 SGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSF-D-RTVKIWNAEDRAYISTLFGHQSEVLTIDCLR 314 (513)
Q Consensus 237 s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 314 (513)
+-...+.|.+.++........+.........+++.|.+..|+.+.. . +.|..+++........+...-.....+++.+
T Consensus 133 ~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~ 212 (349)
T 3v64_C 133 TDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDY 212 (349)
T ss_dssp EETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEET
T ss_pred EcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeC
Confidence 5556788999998755433333334456789999997776665543 4 7788888865433222222344578999997
Q ss_pred -CCeEEEEe-CCCcEEEEecCCCeeeE-EecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeec
Q 010296 315 -KERVLTVG-RDRSMQLWKVPEESRLV-FRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKN 383 (513)
Q Consensus 315 -~~~~~~~~-~d~~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~ 383 (513)
.++++.+. ..+.|..+++....... ..........+++..+..+++-...+.|..++..+++.+..+..
T Consensus 213 ~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 284 (349)
T 3v64_C 213 AGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRN 284 (349)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEecc
Confidence 45666544 56789999987654333 33334556777774433456666788898888777777666653
No 288
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.31 E-value=0.00036 Score=66.62 Aligned_cols=249 Identities=11% Similarity=0.026 Sum_probs=139.9
Q ss_pred ccEEEEEEcCC--CCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCC-----cEEEEeCCC
Q 010296 221 KHILALAVSSD--GRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDR-----TVKIWNAED 293 (513)
Q Consensus 221 ~~v~~~~~s~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~ 293 (513)
.....|+|+|+ ...|+.+...+.|+.+++.++....... .......++|+++++ |+.+...+ .+...+...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 34678999984 4445555444899999998777655443 455689999999999 55444322 233333322
Q ss_pred Cce-eEEeecccCCeEEEEeeC-CCeEEEEe-CCCcEEEEecCCCee-eE-Ee-cCCCCeeEEEeecCCe-E-EEEeCCC
Q 010296 294 RAY-ISTLFGHQSEVLTIDCLR-KERVLTVG-RDRSMQLWKVPEESR-LV-FR-APASSLECCCFISNDE-F-LSGSDDG 365 (513)
Q Consensus 294 ~~~-~~~~~~~~~~v~~~~~~~-~~~~~~~~-~d~~i~iwd~~~~~~-~~-~~-~~~~~v~~~~~~~~~~-~-~~~~~dg 365 (513)
+.. ...+. .......+++.| ++.++.+. .++.|+.++..++.. .. .. ........++++|++. | ++-...+
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 211 11121 234456788888 77777665 567899999876654 22 21 2222334699999985 4 4555678
Q ss_pred CEEEEecCC--CCe--eEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEE---------ec
Q 010296 366 SIELWSLLR--KKP--VYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTV---------CG 432 (513)
Q Consensus 366 ~i~iwd~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---------s~ 432 (513)
.|+.+++.. +.. ...+...... ..+. + +. ...........+++ .+
T Consensus 296 ~I~~~~~d~~~~~~~~~~~~ag~~g~----~g~~-d-g~----------------~~~a~~~~P~giav~~n~~y~~dd~ 353 (433)
T 4hw6_A 296 CIYRVDYNRETGKLAVPYIVCGQHSS----PGWV-D-GM----------------GTGARLWGPNQGIFVKNEAYAGEED 353 (433)
T ss_dssp EEEEEEBCTTTCCBCCCEEEEECTTC----CCCB-C-EE----------------GGGSBCSSEEEEEEEECGGGTTSSC
T ss_pred EEEEEeCCCCCcccCcEEEEEecCCC----CccC-C-Cc----------------ccceEEcCCccEEEEccccccccCC
Confidence 898887653 321 1122111000 0000 0 00 00111123678898 67
Q ss_pred CCCEEEEecCCCcEEEEEeCCCCcceeeeeecC----------------cccEEEEEEeecCCCEEEEEecCCCcccccc
Q 010296 433 GSDLAASGAGNGSVRLWAIESETKDIQPLYNLP----------------LVGFVNSLAFAKSGQFLIAGVGQEPRLGRWG 496 (513)
Q Consensus 433 ~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~----------------~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~ 496 (513)
+|.++++-...+.|+.++. ++ .+..+.... .......|+++|....|+++-...++|+..+
T Consensus 354 ~g~lyvaD~~n~~I~~~~~-~G--~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~ 430 (433)
T 4hw6_A 354 EYDFYFCDRDSHTVRVLTP-EG--RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIA 430 (433)
T ss_dssp CEEEEEEETTTTEEEEECT-TS--EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEE
T ss_pred CCcEEEEECCCCEEEEECC-CC--CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEe
Confidence 7777777777888998874 33 222222110 1123678999944444444435666777665
Q ss_pred c
Q 010296 497 H 497 (513)
Q Consensus 497 ~ 497 (513)
.
T Consensus 431 ~ 431 (433)
T 4hw6_A 431 P 431 (433)
T ss_dssp E
T ss_pred c
Confidence 4
No 289
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.26 E-value=0.00049 Score=61.63 Aligned_cols=163 Identities=8% Similarity=0.071 Sum_probs=106.0
Q ss_pred CcCCCeEEEEEecCCCeEEEEe-CCCcEEEEeCCCCceeEEeecc-----c--CCeEEEEe---eCCCeEEEEeC-----
Q 010296 260 GHRGPVSCLTFRQGTSELFSGS-FDRTVKIWNAEDRAYISTLFGH-----Q--SEVLTIDC---LRKERVLTVGR----- 323 (513)
Q Consensus 260 ~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~-----~--~~v~~~~~---~~~~~~~~~~~----- 323 (513)
.......++.|++....|+.++ ..++|..|+...+......... . ..+..|.| .|+++|+++..
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 3344556789988766776666 6899999999765443332211 1 13578899 57888876433
Q ss_pred ---------CCcEEEEecC---CCeeeEEec--------------CCCCeeEEEeecCCe-EEEEeCC-CCEEEEecCCC
Q 010296 324 ---------DRSMQLWKVP---EESRLVFRA--------------PASSLECCCFISNDE-FLSGSDD-GSIELWSLLRK 375 (513)
Q Consensus 324 ---------d~~i~iwd~~---~~~~~~~~~--------------~~~~v~~~~~~~~~~-~~~~~~d-g~i~iwd~~~~ 375 (513)
+..|..||+. +++...... .......++..++|. +++++.. +.|..++....
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 5779999998 665543221 112467888889886 6677777 77777775543
Q ss_pred CeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 376 KPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
.+..+....+. .......+.|+++|+|++|++....|.|..+|+...
T Consensus 170 -~~~~~~~~~~~-------------------------------~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 170 -TVSTFAWESGN-------------------------------GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp -CEEEEEECCCC-------------------------------SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred -EEeeeeecCCC-------------------------------cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 33322211110 001112778999999998888877999999998853
No 290
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.25 E-value=0.0051 Score=66.04 Aligned_cols=184 Identities=13% Similarity=0.061 Sum_probs=97.7
Q ss_pred CCCeEEEEECCC------CCeEEEEeC-CceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC
Q 010296 159 RQSVTAVALSED------DSKGFSASK-DGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD 231 (513)
Q Consensus 159 ~~~V~~~~~s~~------~~~l~t~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 231 (513)
...|.|+++.|. +.+++.|.. |++|+|+++.+.+.+... .+.. ..-...|.-+.+ ..
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~-----~L~~----------~~~p~si~l~~~-~~ 616 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKE-----MLGG----------EIIPRSILMTTF-ES 616 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEE-----ECCS----------SCCEEEEEEEEE-TT
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEE-----ECCC----------CCCCcEEEEEEe-CC
Confidence 567999999863 478999997 999999999875544321 0000 001122333334 23
Q ss_pred CCEEEEEeCCCcEEEEeC--CCcceeee--ccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCe
Q 010296 232 GRYLASGGLDRHIHLWDT--RIQEHIQA--FPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEV 307 (513)
Q Consensus 232 ~~~l~s~~~dg~i~vwd~--~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v 307 (513)
..+|.+|-.||.+..+.+ .++..... ..-...++.-..|...+..-+.+..+....+|.-. ++.... .-....+
T Consensus 617 ~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~~v 694 (1158)
T 3ei3_A 617 SHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLKEV 694 (1158)
T ss_dssp EEEEEEEETTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSSCC
T ss_pred CcEEEEEeCCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe-ccChHHh
Confidence 468889999998866554 34443321 11123455555555444443333334555555443 332221 1122234
Q ss_pred EEEE-eeCC---CeEEEEeCCCcEEEEecCCCeee--EEecCCCCeeEEEeecCCe-EEEE
Q 010296 308 LTID-CLRK---ERVLTVGRDRSMQLWKVPEESRL--VFRAPASSLECCCFISNDE-FLSG 361 (513)
Q Consensus 308 ~~~~-~~~~---~~~~~~~~d~~i~iwd~~~~~~~--~~~~~~~~v~~~~~~~~~~-~~~~ 361 (513)
.+++ |+.. +-++ +..++.++|..+...... ........+..++++|... ++.+
T Consensus 695 ~~~~~F~se~~~~g~v-~~~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~ 754 (1158)
T 3ei3_A 695 NYMCPLNSDGYPDSLA-LANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVL 754 (1158)
T ss_dssp CEEEEECCSSSTTEEE-EECSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEE
T ss_pred ceEeccCcccCCCcEE-EEcCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEE
Confidence 3333 4321 2344 344566888887543322 2333445677888888654 4433
No 291
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.24 E-value=0.005 Score=63.21 Aligned_cols=161 Identities=10% Similarity=-0.088 Sum_probs=103.8
Q ss_pred cccEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCc----ceeeeccCcCCCeEEEEEecCCCeEEE-EeCCCcEEEEeCCC
Q 010296 220 SKHILALAVSSDGRYL-ASGGLDRHIHLWDTRIQ----EHIQAFPGHRGPVSCLTFRQGTSELFS-GSFDRTVKIWNAED 293 (513)
Q Consensus 220 ~~~v~~~~~s~~~~~l-~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~~ 293 (513)
...+..|+|++....| ++-...+.|+.+++... .....+.........|++.+.+..|+. -...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 4457899999855544 45555678999988753 223333334456778999987766664 45578999999976
Q ss_pred CceeEEeecccCCeEEEEeeCC-CeEEEEeC--CCcEEEEecCCCeeeEEe-cCCCCeeEEEeecC-CeEE-EEeCCCCE
Q 010296 294 RAYISTLFGHQSEVLTIDCLRK-ERVLTVGR--DRSMQLWKVPEESRLVFR-APASSLECCCFISN-DEFL-SGSDDGSI 367 (513)
Q Consensus 294 ~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~--d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~-~~~~-~~~~dg~i 367 (513)
......+.........|++.|. +.|+.+.. .+.|.+.++.......+. ........|++.+. ++|+ +=...+.|
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 5544334434456889999985 66665543 367888888766554433 33456788999854 4544 44556788
Q ss_pred EEEecCCCCeeEE
Q 010296 368 ELWSLLRKKPVYI 380 (513)
Q Consensus 368 ~iwd~~~~~~~~~ 380 (513)
..+++........
T Consensus 583 ~~~d~dG~~~~~v 595 (791)
T 3m0c_C 583 SSIDVNGGNRKTI 595 (791)
T ss_dssp EEEETTSCSCEEE
T ss_pred EEEecCCCceEEE
Confidence 8888865544333
No 292
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=0.0025 Score=61.12 Aligned_cols=260 Identities=10% Similarity=0.015 Sum_probs=144.4
Q ss_pred CeEEEEECC-CCCeEEEE-eCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEE-------cCC
Q 010296 161 SVTAVALSE-DDSKGFSA-SKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAV-------SSD 231 (513)
Q Consensus 161 ~V~~~~~s~-~~~~l~t~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------s~~ 231 (513)
....|+|+| +...|+.+ ...+.|++.|+.++.....+.. ..........|+| +++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~----------------~~~~~~~p~~ia~~~~~~~~d~~ 203 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNI----------------NTIPTNRIRSIAFNKKIEGYADE 203 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECC----------------TTSSCSBEEEEEECCCBTTTBCT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEcc----------------CccccCCCcEEEEeecccccCCC
Confidence 467899999 35545544 4457788889887665432200 0112345899999 999
Q ss_pred CCEEEEEeCCC-------cEEEEeCCC-ccee-----eeccCcCCCeEEEEEecCCCeEE-EEeCCCcEEEEeCC-----
Q 010296 232 GRYLASGGLDR-------HIHLWDTRI-QEHI-----QAFPGHRGPVSCLTFRQGTSELF-SGSFDRTVKIWNAE----- 292 (513)
Q Consensus 232 ~~~l~s~~~dg-------~i~vwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~----- 292 (513)
+.+|+++...+ .|.+++... +... ..+.. ......++++|++..|+ +-..++.|..+|+.
T Consensus 204 G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~ 282 (496)
T 3kya_A 204 AEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKT 282 (496)
T ss_dssp TCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHH
T ss_pred CCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEeccccccc
Confidence 99777766554 266665333 2221 12221 12345788899555555 55567889999987
Q ss_pred --CCce-----------eEEe-e-cccCCeEEEEeeCCCe-EEEE-eCCCcEEEEecCC--Cee---eEEecC-------
Q 010296 293 --DRAY-----------ISTL-F-GHQSEVLTIDCLRKER-VLTV-GRDRSMQLWKVPE--ESR---LVFRAP------- 343 (513)
Q Consensus 293 --~~~~-----------~~~~-~-~~~~~v~~~~~~~~~~-~~~~-~~d~~i~iwd~~~--~~~---~~~~~~------- 343 (513)
++.. ...+ . +.....+.|+|+|++. ++.+ ...+.|+.++... +.. ..+.+.
T Consensus 283 ~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~ 362 (496)
T 3kya_A 283 IKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYR 362 (496)
T ss_dssp HHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCB
T ss_pred ccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCccc
Confidence 5543 1121 1 2234568999999986 4444 4567888866543 221 112111
Q ss_pred --------CCCee-EEEee-------cCCeEE-EEeCCCCEEEEecCCCCeeEEeecCCCcc--cCCCCcccCcCccccc
Q 010296 344 --------ASSLE-CCCFI-------SNDEFL-SGSDDGSIELWSLLRKKPVYIVKNAHPLL--DGLKNFEQDEGKISNG 404 (513)
Q Consensus 344 --------~~~v~-~~~~~-------~~~~~~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~ 404 (513)
-.... .++.. +.+.|+ +=..+.+|+.++ .++ .+.++....... .....+ +
T Consensus 363 DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG~g~~~~~~~~~~~---------G 431 (496)
T 3kya_A 363 DDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAGRGASTSLADGNQW---------G 431 (496)
T ss_dssp CCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEESCTTHHHHHSCSC---------C
T ss_pred CCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEecccccccccCcccc---------c
Confidence 01233 34443 345544 445677888888 455 344443221100 000000 0
Q ss_pred cCCCCCCCCCCcCCCCCcceEEEEEEecC-CCEEEEecCCCcEEEEEeCCC
Q 010296 405 HSENGNLNPGSYHSSSAYSWVSSVTVCGG-SDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~g~~dg~v~vwd~~~~ 454 (513)
. ..+. ............|+++++ |.++++=..+..||.+++...
T Consensus 432 ~-~dG~-----~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 432 T-DDGD-----LREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp C-CCEE-----TTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred c-CCCC-----chhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 0 0000 000122233789999996 777777778889999998765
No 293
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.20 E-value=0.0069 Score=60.64 Aligned_cols=205 Identities=9% Similarity=-0.029 Sum_probs=133.4
Q ss_pred CCCeEEEEECCCCCeEE-EEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEE-E
Q 010296 159 RQSVTAVALSEDDSKGF-SASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYL-A 236 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~-t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~ 236 (513)
-..+..|+|++....|+ +-..++.|..+++........+ .........|++.+.+..| +
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~-------------------~~g~~~P~GlAvD~~~~~LY~ 96 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVV-------------------EFGLDYPEGMAVDWLGKNLYW 96 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-------------------CSSCSCCCEEEEETTTTEEEE
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEE-------------------eCCCCCcceEEEEeCCCEEEE
Confidence 34678999999766666 4456788999998765432211 0111235678888765544 4
Q ss_pred EEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeC--CCcEEEEeCCCCceeEEeecccCCeEEEEeeC
Q 010296 237 SGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSF--DRTVKIWNAEDRAYISTLFGHQSEVLTIDCLR 314 (513)
Q Consensus 237 s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 314 (513)
+-...+.|.+.++........+...-.....|++.|....|+.+.. .+.|...++...... .+...-.....|++.+
T Consensus 97 tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l~~~~~~P~GlalD~ 175 (628)
T 4a0p_A 97 ADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TLVPNVGRANGLTIDY 175 (628)
T ss_dssp EETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEECSCSSEEEEEEET
T ss_pred EECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EEECCCCCcceEEEcc
Confidence 5455688999998755433233234456789999997667776553 567888887654433 3333455678999998
Q ss_pred C-CeEEEEe-CCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeec
Q 010296 315 K-ERVLTVG-RDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKN 383 (513)
Q Consensus 315 ~-~~~~~~~-~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~ 383 (513)
+ ++|+.+. ..+.|..+++.......+.........+++..+..+++-...+.|...|..+++....+..
T Consensus 176 ~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~~ 246 (628)
T 4a0p_A 176 AKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQG 246 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred ccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEEec
Confidence 5 5666544 5678999998765444444444456678877643455666688999999888876666553
No 294
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.18 E-value=0.0037 Score=56.87 Aligned_cols=219 Identities=10% Similarity=-0.026 Sum_probs=132.6
Q ss_pred CceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCE-EEEEeCCCcEEEEeCCCccee-ee
Q 010296 180 DGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRY-LASGGLDRHIHLWDTRIQEHI-QA 257 (513)
Q Consensus 180 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~~~dg~i~vwd~~~~~~~-~~ 257 (513)
...|+..++........+ .......+..++|++.... +++-...+.|..+++..+... ..
T Consensus 12 ~~~I~~i~l~~~~~~~~~------------------~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~ 73 (318)
T 3sov_A 12 RRDLRLVDATNGKENATI------------------VVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV 73 (318)
T ss_dssp EEEEEEEETTCTTSCCEE------------------EEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEE
T ss_pred cCeEEEEECCCCceEEEE------------------EecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEE
Confidence 467888898765421111 0112334778999985444 445556788999998766321 12
Q ss_pred ccCcCCCeEEEEEecCCCeEE-EEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeCC-CeEEEEeC--CCcEEEEecC
Q 010296 258 FPGHRGPVSCLTFRQGTSELF-SGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRK-ERVLTVGR--DRSMQLWKVP 333 (513)
Q Consensus 258 ~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~--d~~i~iwd~~ 333 (513)
+.........+++.+.+..|+ +-...+.|.++++........+.........+++.|. +.++.+.. .+.|..+++.
T Consensus 74 ~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 153 (318)
T 3sov_A 74 VVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 153 (318)
T ss_dssp EEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT
T ss_pred EcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC
Confidence 222234567899987555555 4456788999998764433333344556789999884 66665553 5788888887
Q ss_pred CCeeeEE-ecCCCCeeEEEeecC-CeE-EEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCC
Q 010296 334 EESRLVF-RAPASSLECCCFISN-DEF-LSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGN 410 (513)
Q Consensus 334 ~~~~~~~-~~~~~~v~~~~~~~~-~~~-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 410 (513)
......+ .........+++++. +.| ++=+..+.|..+++........+...
T Consensus 154 G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~-------------------------- 207 (318)
T 3sov_A 154 GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS-------------------------- 207 (318)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSC--------------------------
T ss_pred CCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCC--------------------------
Confidence 5443333 233456678999984 454 45566788999998653322222100
Q ss_pred CCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 411 LNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 411 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
......+++.. +.++.+-...+.|..++..++
T Consensus 208 -----------~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 208 -----------LPHPFALTLFE-DILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp -----------CSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred -----------CCCceEEEEeC-CEEEEEecCCCeEEEEECCCC
Confidence 01155666653 345556566778888887665
No 295
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.18 E-value=0.0013 Score=60.92 Aligned_cols=260 Identities=11% Similarity=0.031 Sum_probs=128.9
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCccee---eec----cCcCCCeEEEEEecC---CCeEEEEeC--------C
Q 010296 222 HILALAVSSDGRYLASGGLDRHIHLWDTRIQEHI---QAF----PGHRGPVSCLTFRQG---TSELFSGSF--------D 283 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~---~~~----~~~~~~v~~~~~~~~---~~~l~~~~~--------d 283 (513)
..+.|+|.|+|++|+++...|.|++++.. +... ..+ .........|+|+|+ +..|+.+.. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 47899999999834445567999999853 3321 111 112346789999996 555554432 2
Q ss_pred CcEEEEeCCCC--c--eeEE-eec------ccCCeEEEEeeCCCeEEEEeCC--------------CcEEEEecCCC---
Q 010296 284 RTVKIWNAEDR--A--YIST-LFG------HQSEVLTIDCLRKERVLTVGRD--------------RSMQLWKVPEE--- 335 (513)
Q Consensus 284 g~i~iwd~~~~--~--~~~~-~~~------~~~~v~~~~~~~~~~~~~~~~d--------------~~i~iwd~~~~--- 335 (513)
..|..|++... . .... +.. .......|.|.|++.|+.+..+ +.|.-++....
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 35666666432 1 1111 111 1112457999999987755432 45666665432
Q ss_pred ----------eeeEEecCCCCeeEEEeec-CCeEEEEeCCC--CEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccc
Q 010296 336 ----------SRLVFRAPASSLECCCFIS-NDEFLSGSDDG--SIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKIS 402 (513)
Q Consensus 336 ----------~~~~~~~~~~~v~~~~~~~-~~~~~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 402 (513)
....+.........++|.| .+.|.++.... .=.|.-+..+... ..+....-..+ ....+.
T Consensus 178 ~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~ny-----Gwp~~~~~~~~--~~~~~~ 250 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNY-----GWPLATWGINY--SGFKIP 250 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBC-----CTTTBCSSBCT--TSSCCT
T ss_pred CCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcC-----CCCCccCCCCC--CCCccC
Confidence 1112222234467788888 67765543321 1122222111100 00000000000 000000
Q ss_pred cc--cCCCCCCCCCCcCCCCCcceEEEEEEec-------CCCEEEEecCCCcEEEEEeCCCCcceeeeeec-CcccEEEE
Q 010296 403 NG--HSENGNLNPGSYHSSSAYSWVSSVTVCG-------GSDLAASGAGNGSVRLWAIESETKDIQPLYNL-PLVGFVNS 472 (513)
Q Consensus 403 ~~--~~~~~~~~~~~~~~~~~~~~i~~~~~s~-------~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~-~~~~~v~~ 472 (513)
.. ....+...+. +. ..+...+..++|.. +|.++++.-..+.|...++..+ ........+ .....+..
T Consensus 251 ~~~~~~~~~~~~P~-~~-~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~rp~~ 327 (353)
T 2g8s_A 251 EAKGEIVAGTEQPV-FY-WKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGD-KVTEDGRILTDRGQRIRD 327 (353)
T ss_dssp TCCBSSCTTSCCCS-EE-ESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETT-EEEEEEEESGGGCCCEEE
T ss_pred cccCCCCCCccCCe-EE-eCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCC-eEeeeEEcccCCCCceeE
Confidence 00 0000001000 00 11123477888864 4678887777888888888754 222211111 12357899
Q ss_pred EEeecCCCEEEEEecCCCcc
Q 010296 473 LAFAKSGQFLIAGVGQEPRL 492 (513)
Q Consensus 473 v~~sp~~~~l~~~~~~dg~v 492 (513)
|++.|||.++++.-..+|+|
T Consensus 328 v~~~pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 328 VRTGPDGYLYVLTDESSGEL 347 (353)
T ss_dssp EEECTTSCEEEEECSTTEEE
T ss_pred EEECCCCcEEEEEeCCCCEE
Confidence 99999999777652344443
No 296
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.17 E-value=0.0013 Score=67.48 Aligned_cols=209 Identities=11% Similarity=0.026 Sum_probs=131.9
Q ss_pred ccCCCeEEEEECCCCCeEE-EEeCCceEEEEeCCCCcc---ccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCC
Q 010296 157 KHRQSVTAVALSEDDSKGF-SASKDGSILHWDVSSGKG---VKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDG 232 (513)
Q Consensus 157 ~h~~~V~~~~~s~~~~~l~-t~~~dg~v~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 232 (513)
.....+.+|+|++....|+ +-...+.|+.+++..... ...+ +.........|++.+.+
T Consensus 421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~v------------------i~~~l~~P~GLAvD~~~ 482 (791)
T 3m0c_C 421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV------------------ISRDIQAPDGLAVDWIH 482 (791)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE------------------ECSSCSCCCEEEEETTT
T ss_pred cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEE------------------EecCCCCcceeeeeecC
Confidence 3455678899988655555 545567888888875321 1111 11123345678898876
Q ss_pred CEEE-EEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeC--CCcEEEEeCCCCceeEEeecccCCeEE
Q 010296 233 RYLA-SGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSF--DRTVKIWNAEDRAYISTLFGHQSEVLT 309 (513)
Q Consensus 233 ~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~ 309 (513)
..|+ +-...+.|.+.++........+.........|++.|...+|+.+.. .+.|.+.++........+...-.....
T Consensus 483 ~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~G 562 (791)
T 3m0c_C 483 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 562 (791)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEE
T ss_pred CcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceE
Confidence 5444 5556789999998755544444334456889999998777776653 367888888655443333334456789
Q ss_pred EEeeC-CCeEEEEe-CCCcEEEEecCCCeeeEEec---CCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeec
Q 010296 310 IDCLR-KERVLTVG-RDRSMQLWKVPEESRLVFRA---PASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKN 383 (513)
Q Consensus 310 ~~~~~-~~~~~~~~-~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~ 383 (513)
|++.+ .++|+.+. ..+.|..+++.......+.. .......|++..+..+++-...+.|...+..+++.+..+..
T Consensus 563 LavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~ 641 (791)
T 3m0c_C 563 ITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAE 641 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred EEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeec
Confidence 99986 45666554 46789999987655543332 12345567765543455666778898888888877776653
No 297
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.13 E-value=0.00065 Score=61.45 Aligned_cols=185 Identities=9% Similarity=0.144 Sum_probs=116.0
Q ss_pred CCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeCC----Ce---EE-EEe-C--CCcEEEEecC--CCeeeE
Q 010296 273 GTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRK----ER---VL-TVG-R--DRSMQLWKVP--EESRLV 339 (513)
Q Consensus 273 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~~-~~~-~--d~~i~iwd~~--~~~~~~ 339 (513)
...+++.....+.|.+||+ +++.+..+.. +.++.+..-|+ +. ++ +.. . +++|.+|++. +.....
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 3455666667789999999 8888887753 56777766653 21 33 333 3 5789999773 333222
Q ss_pred Eec------CC-CCeeEEEe--ecC-Ce--EEEEeCCCCEEEEecC---C----CCeeEEeecCCCcccCCCCcccCcCc
Q 010296 340 FRA------PA-SSLECCCF--ISN-DE--FLSGSDDGSIELWSLL---R----KKPVYIVKNAHPLLDGLKNFEQDEGK 400 (513)
Q Consensus 340 ~~~------~~-~~v~~~~~--~~~-~~--~~~~~~dg~i~iwd~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (513)
... .. ..+..+|+ ++. +. +++...+|.+..|++. . .+.+.++....
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs--------------- 180 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS--------------- 180 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS---------------
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC---------------
Confidence 211 11 45556666 553 42 5678888999999883 2 34455554322
Q ss_pred cccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCC-cceeeeeec--Cc-ccEEEEEEe-
Q 010296 401 ISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESET-KDIQPLYNL--PL-VGFVNSLAF- 475 (513)
Q Consensus 401 i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~-~~~~~~~~~--~~-~~~v~~v~~- 475 (513)
.+-.+...+....|+.+-++.-|..++..... .....+... .+ ...+..|++
T Consensus 181 -----------------------q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~ 237 (355)
T 3amr_A 181 -----------------------QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIY 237 (355)
T ss_dssp -----------------------CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEE
T ss_pred -----------------------CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEE
Confidence 27888999988899999988656555544221 111222222 12 235788888
Q ss_pred -ecCCC-EEEEEecCCCcccccccC
Q 010296 476 -AKSGQ-FLIAGVGQEPRLGRWGHL 498 (513)
Q Consensus 476 -sp~~~-~l~~~~~~dg~v~~W~~~ 498 (513)
.++++ ||++++-.+.++.+|+..
T Consensus 238 ~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 238 YAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred ecCCCCEEEEEEcCCCCEEEEEECC
Confidence 56666 788886567799999886
No 298
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.05 E-value=0.0057 Score=58.64 Aligned_cols=253 Identities=9% Similarity=-0.049 Sum_probs=143.7
Q ss_pred cEEEEEEcCC-CCEEEEE-eCCCcEEEEeCCCcceeeeccCc---CCCeEEEEE-------ecCCCeEEEEeCCC-----
Q 010296 222 HILALAVSSD-GRYLASG-GLDRHIHLWDTRIQEHIQAFPGH---RGPVSCLTF-------RQGTSELFSGSFDR----- 284 (513)
Q Consensus 222 ~v~~~~~s~~-~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~~~~dg----- 284 (513)
....|+|+|. ...|+.+ ...+.|++.|+..+.+...+... ......|+| ++++.+|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 5788999983 4444444 44467999998887765544332 235789999 99999777766554
Q ss_pred --cEEEEeCCC-Ccee-----EEeecccCCeEEEEeeC-CCeEEEEe-CCCcEEEEecC-------CCee----------
Q 010296 285 --TVKIWNAED-RAYI-----STLFGHQSEVLTIDCLR-KERVLTVG-RDRSMQLWKVP-------EESR---------- 337 (513)
Q Consensus 285 --~i~iwd~~~-~~~~-----~~~~~~~~~v~~~~~~~-~~~~~~~~-~d~~i~iwd~~-------~~~~---------- 337 (513)
.|.+++... +... ..+.. -.....++.+| ++.|+++. ..+.|+.+++. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665433 2221 22221 22345778888 56666544 67789999987 4432
Q ss_pred ----eEEecCCCCeeEEEeecCCe--EEEEeCCCCEEEEecCC--CCe--eEEeecCCCcccCCCCcccCcCccccccCC
Q 010296 338 ----LVFRAPASSLECCCFISNDE--FLSGSDDGSIELWSLLR--KKP--VYIVKNAHPLLDGLKNFEQDEGKISNGHSE 407 (513)
Q Consensus 338 ----~~~~~~~~~v~~~~~~~~~~--~~~~~~dg~i~iwd~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 407 (513)
+...........++|+|++. +++-+....|+.++... +.. ...+...... ..+. +
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~----~G~~-D---------- 363 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQ----SGYR-D---------- 363 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTB----CCCB-C----------
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCC----Cccc-C----------
Confidence 11122234567899999996 34555677888866533 221 1222211000 0000 0
Q ss_pred CCCCCCCCcCCCCCcceEE-EEEEe-------cCCCEEEEecCCCcEEEEEeCCCCcceeeeeecC--------------
Q 010296 408 NGNLNPGSYHSSSAYSWVS-SVTVC-------GGSDLAASGAGNGSVRLWAIESETKDIQPLYNLP-------------- 465 (513)
Q Consensus 408 ~~~~~~~~~~~~~~~~~i~-~~~~s-------~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~-------------- 465 (513)
+.-. ........ .++.. +++.++++-..++.|+.++ .++ .+..+....
T Consensus 364 -G~~~------~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G--~v~TiaG~g~~~~~~~~~~~G~~ 433 (496)
T 3kya_A 364 -DVGT------EARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG--IVSTYAGRGASTSLADGNQWGTD 433 (496)
T ss_dssp -CBGG------GCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC--BEEEEEESCTTHHHHHSCSCCCC
T ss_pred -Cccc------ccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCC--CEEEEecccccccccCccccccC
Confidence 0000 01111144 45554 5667777777788899998 343 233332210
Q ss_pred --------cccEEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 466 --------LVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 466 --------~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
.......|++++++..|+++=....+|+.++....
T Consensus 434 dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 434 DGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp CEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred CCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 01246789999973344445377788998877554
No 299
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.05 E-value=0.0025 Score=59.03 Aligned_cols=147 Identities=12% Similarity=0.081 Sum_probs=81.8
Q ss_pred CCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC---CCEE
Q 010296 159 RQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD---GRYL 235 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l 235 (513)
-.....|+|.|+|++++ +...|.|.+++ ++... .+ ... + ...........|+|+|+ +..|
T Consensus 30 l~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~-~~-------~~~----~--v~~~g~~~p~gia~~pdf~~~g~l 92 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLS-TY-------AEL----S--VYHRGESGLLGLALHPRFPQEPYV 92 (352)
T ss_dssp CSCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEE-EE-------EEC----C--CCCSTTCSEEEEEECTTTTTSCEE
T ss_pred CCCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCcc-Ee-------ecc----e--EeecCCCCceeEEECCCCCCCCEE
Confidence 34567999999998554 45669999998 33321 11 000 0 01122346889999998 5555
Q ss_pred EEEeC-C-----CcEEEEeCCCcc-----e-eeecc---CcCCCeEEEEEecCCCeEEEEeC-------------CCcEE
Q 010296 236 ASGGL-D-----RHIHLWDTRIQE-----H-IQAFP---GHRGPVSCLTFRQGTSELFSGSF-------------DRTVK 287 (513)
Q Consensus 236 ~s~~~-d-----g~i~vwd~~~~~-----~-~~~~~---~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~ 287 (513)
+++.. . +.|..|++..+. . +..+. ........|+|.|+|.+.++.+. .|.|.
T Consensus 93 Yv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ 172 (352)
T 2ism_A 93 YAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKIL 172 (352)
T ss_dssp EEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEE
T ss_pred EEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEE
Confidence 44432 2 568888876431 1 22233 11123468999999976555432 25666
Q ss_pred EEeCCCC------------ceeEEe-ecccCCeEEEEeeC-CCeEEEEeC
Q 010296 288 IWNAEDR------------AYISTL-FGHQSEVLTIDCLR-KERVLTVGR 323 (513)
Q Consensus 288 iwd~~~~------------~~~~~~-~~~~~~v~~~~~~~-~~~~~~~~~ 323 (513)
.++.... .....+ .++ .....++|.| ++.++++..
T Consensus 173 ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 173 RLTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp EECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEE
T ss_pred EEcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEc
Confidence 6665431 011111 122 2356788988 677776543
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.05 E-value=6e-05 Score=76.77 Aligned_cols=206 Identities=10% Similarity=0.007 Sum_probs=124.2
Q ss_pred CCeEEEEECCCCCeEEEE-eCCceEEEEeCCCC---ccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC-CCE
Q 010296 160 QSVTAVALSEDDSKGFSA-SKDGSILHWDVSSG---KGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD-GRY 234 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~t~-~~dg~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~ 234 (513)
..+..|+|++.+..|+.+ ...+.|+.+++.+. .....+ ..........|++.+. +++
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~------------------i~~~~~~P~glavD~~~g~L 467 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV------------------ISRDIQAPDGLAVDWIHSNI 467 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCB------------------CCSCC--CCCEECCCSSSBC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEE------------------EeCCCCCcceEEEEeeCCcE
Confidence 456788898876666655 34578888887751 111111 0111122456788754 444
Q ss_pred EEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeC--CCcEEEEeCCCCceeEEeecccCCeEEEEe
Q 010296 235 LASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSF--DRTVKIWNAEDRAYISTLFGHQSEVLTIDC 312 (513)
Q Consensus 235 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 312 (513)
+++-...+.|.++++........+.........|++.|.+.+|+.+.. .+.|.++++........+...-.....|++
T Consensus 468 Y~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlav 547 (699)
T 1n7d_A 468 YWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITL 547 (699)
T ss_dssp EECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEE
T ss_pred EEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEE
Confidence 455455688999998765444434333345678899997666665543 267888877543322222222345678999
Q ss_pred eCC-CeEEEE-eCCCcEEEEecCCCeeeEEec---CCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeec
Q 010296 313 LRK-ERVLTV-GRDRSMQLWKVPEESRLVFRA---PASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKN 383 (513)
Q Consensus 313 ~~~-~~~~~~-~~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~ 383 (513)
.++ ++|+.+ ...+.|.++++.......+.. .......+++..+..+++....+.|..++..+++.+..+..
T Consensus 548 d~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 548 DLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp CTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCT
T ss_pred eccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeec
Confidence 975 455544 456789999987654443332 12334456666654566777788999999888887776643
No 301
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.98 E-value=0.019 Score=57.49 Aligned_cols=158 Identities=9% Similarity=-0.027 Sum_probs=95.4
Q ss_pred CCeEEEEECCCCCeEE-EEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE
Q 010296 160 QSVTAVALSEDDSKGF-SASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG 238 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~-t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 238 (513)
.....|++.+.+..|+ +-...+.|.+.++........+ .........|++.|.+.+|+..
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~-------------------~~~l~~P~~Iavdp~~g~ly~t 144 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLF-------------------WQELDQPRAIALDPSSGFMYWT 144 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-------------------CSSCSCCCCEEEETTTTEEEEE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEE-------------------eCCCCCCceEEEecCCCeEEEe
Confidence 5688999999655555 5556789999998764432211 1122336689999976666555
Q ss_pred eC--CCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEe-CCCcEEEEeCCCCceeEEeecccCCeEEEEeeCC
Q 010296 239 GL--DRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGS-FDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRK 315 (513)
Q Consensus 239 ~~--dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 315 (513)
.. .+.|...++........+...-...+.|++++++..|+.+. ..+.|..+++........+.+.......|++..+
T Consensus 145 D~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~ 224 (619)
T 3s94_A 145 DWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED 224 (619)
T ss_dssp ECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS
T ss_pred ccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC
Confidence 53 35677777664433333333345678999999877777654 4678999998754332222222233456676655
Q ss_pred CeEE-EEeCCCcEEEEecCCCee
Q 010296 316 ERVL-TVGRDRSMQLWKVPEESR 337 (513)
Q Consensus 316 ~~~~-~~~~d~~i~iwd~~~~~~ 337 (513)
.++ +-...+.|...|..++..
T Consensus 225 -~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 225 -ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp -EEEEECTTTCSEEEEESSSCCC
T ss_pred -EEEEecCCCCEEEEEECCCCcc
Confidence 444 444577888888766543
No 302
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.96 E-value=0.0084 Score=53.72 Aligned_cols=152 Identities=7% Similarity=0.069 Sum_probs=100.5
Q ss_pred EEEEEEcCCCCEEEEEe-CCCcEEEEeCCCcceee-eccCc------CCCeEEEEE---ecCCCeEEEEe----------
Q 010296 223 ILALAVSSDGRYLASGG-LDRHIHLWDTRIQEHIQ-AFPGH------RGPVSCLTF---RQGTSELFSGS---------- 281 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~-~dg~i~vwd~~~~~~~~-~~~~~------~~~v~~~~~---~~~~~~l~~~~---------- 281 (513)
.-++.|++....|..++ ..++|..|+...+.... .+..- ...+..|.| .|+++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 34689988656666655 78999999987554332 23321 113578999 58866666543
Q ss_pred ---CCCcEEEEeCC---CCceeEEee--cc-----------cCCeEEEEeeCCCeEE-EEeCC-CcEEEEecCCCeeeEE
Q 010296 282 ---FDRTVKIWNAE---DRAYISTLF--GH-----------QSEVLTIDCLRKERVL-TVGRD-RSMQLWKVPEESRLVF 340 (513)
Q Consensus 282 ---~dg~i~iwd~~---~~~~~~~~~--~~-----------~~~v~~~~~~~~~~~~-~~~~d-~~i~iwd~~~~~~~~~ 340 (513)
.+..|..||+. +++.+.... .. ...+..++..++|..+ +.+.. +.|..++........+
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~ 174 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTF 174 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeee
Confidence 26779999999 777665443 11 1247788888888655 56667 7777777765533322
Q ss_pred e--c----CCCCeeEEEeecCCe-EEEEeCCCCEEEEecCC
Q 010296 341 R--A----PASSLECCCFISNDE-FLSGSDDGSIELWSLLR 374 (513)
Q Consensus 341 ~--~----~~~~v~~~~~~~~~~-~~~~~~dg~i~iwd~~~ 374 (513)
. . .....+.+++.|++. |++....|.|..+|+..
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 1 1 122466899999985 56665599999999873
No 303
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.95 E-value=8.1e-05 Score=75.78 Aligned_cols=155 Identities=9% Similarity=-0.069 Sum_probs=94.3
Q ss_pred ccEEEEEEcCCCCEEEEEe-CCCcEEEEeCCC----cceeeeccCcCCCeEEEEEecCCCeEE-EEeCCCcEEEEeCCCC
Q 010296 221 KHILALAVSSDGRYLASGG-LDRHIHLWDTRI----QEHIQAFPGHRGPVSCLTFRQGTSELF-SGSFDRTVKIWNAEDR 294 (513)
Q Consensus 221 ~~v~~~~~s~~~~~l~s~~-~dg~i~vwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~ 294 (513)
..+..|+|++.+..|+.+. ..+.|+.+++.. ......+.........|++.+.+..|+ +-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 3466789998766666554 457899999875 222222222223456688876555454 4455788999998765
Q ss_pred ceeEEeecccCCeEEEEeeCC-CeEEEEeC--CCcEEEEecCCCeeeEEe-cCCCCeeEEEeecCC-e-EEEEeCCCCEE
Q 010296 295 AYISTLFGHQSEVLTIDCLRK-ERVLTVGR--DRSMQLWKVPEESRLVFR-APASSLECCCFISND-E-FLSGSDDGSIE 368 (513)
Q Consensus 295 ~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~--d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~-~-~~~~~~dg~i~ 368 (513)
.....+.........|++.|. +.|+.+.. .+.|.++++.......+. ........|++++.+ . +++-+..+.|.
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 565 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEE
Confidence 443333323345678888884 55554432 367888887654433332 233456678999764 4 44556677898
Q ss_pred EEecCCC
Q 010296 369 LWSLLRK 375 (513)
Q Consensus 369 iwd~~~~ 375 (513)
++++...
T Consensus 566 ~~d~dG~ 572 (699)
T 1n7d_A 566 SIDVNGG 572 (699)
T ss_dssp EECSSSS
T ss_pred EEccCCC
Confidence 8888643
No 304
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.95 E-value=0.021 Score=57.17 Aligned_cols=186 Identities=6% Similarity=-0.076 Sum_probs=120.6
Q ss_pred eEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEE-EEeCCCcEEEEeCCC
Q 010296 173 KGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLA-SGGLDRHIHLWDTRI 251 (513)
Q Consensus 173 ~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~i~vwd~~~ 251 (513)
+|+.+ ....|+..++.+......+ .......+..|+|++....|+ +-...+.|..+++..
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~------------------~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g 68 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAI------------------PLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNG 68 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEEC------------------CCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEE-eCCcEEEEECCCCCcceEE------------------EcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCC
Confidence 44443 4567888888765432211 112234588999999665555 445578899999876
Q ss_pred cceeeeccCcCCCeEEEEEecCCCeEEEE-eCCCcEEEEeCCCCceeEEeecccCCeEEEEeeC-CCeEEEEeC--CCcE
Q 010296 252 QEHIQAFPGHRGPVSCLTFRQGTSELFSG-SFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLR-KERVLTVGR--DRSM 327 (513)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~--d~~i 327 (513)
......+.........|++.+.+..|+.+ ...+.|.+.++........+...-.....|++.| .+.++.+.. .+.|
T Consensus 69 ~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I 148 (628)
T 4a0p_A 69 SALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKI 148 (628)
T ss_dssp CSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred CCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEE
Confidence 54443343333457789998876666544 4567899999876543333323445678999998 567765553 5678
Q ss_pred EEEecCCCeeeEEecCCCCeeEEEeecC-CeE-EEEeCCCCEEEEecCCCCe
Q 010296 328 QLWKVPEESRLVFRAPASSLECCCFISN-DEF-LSGSDDGSIELWSLLRKKP 377 (513)
Q Consensus 328 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~-~~~-~~~~~dg~i~iwd~~~~~~ 377 (513)
...++.......+.........+++.+. ++| ++-...+.|..+++.....
T Consensus 149 ~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~ 200 (628)
T 4a0p_A 149 DRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR 200 (628)
T ss_dssp EEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred EEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce
Confidence 8888876655544445567788999985 454 4556678899999866443
No 305
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.94 E-value=0.0037 Score=56.57 Aligned_cols=191 Identities=11% Similarity=0.143 Sum_probs=119.4
Q ss_pred CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC----CC---EEEEEe-C-
Q 010296 170 DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD----GR---YLASGG-L- 240 (513)
Q Consensus 170 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~---~l~s~~-~- 240 (513)
...+++.....+-+.+||+ .++.+..+ . ...++.+..-|. |+ ++++.. .
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~-------------------~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~ 96 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSY-------------------N--TGKLNNVDIRYDFPLNGKKVDIAAASNRSE 96 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEE-------------------C--CSCEEEEEEEEEEEETTEEEEEEEEEECST
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEc-------------------c--CCCcccEEEecccccCCceEeEEEEeCCCC
Confidence 4456666677789999999 77777654 1 134556655552 32 223333 3
Q ss_pred -CCcEEEEeC--CCcceeeeccC-------cCCCeEEEEE--ecC-CC-eEEEEeCCCcEEEEeCC-------CCceeEE
Q 010296 241 -DRHIHLWDT--RIQEHIQAFPG-------HRGPVSCLTF--RQG-TS-ELFSGSFDRTVKIWNAE-------DRAYIST 299 (513)
Q Consensus 241 -dg~i~vwd~--~~~~~~~~~~~-------~~~~v~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~-------~~~~~~~ 299 (513)
+++|.+|++ .++. +..+.. ....+..+|+ +|. +. ++++...+|.+..|++. +.+.+++
T Consensus 97 ~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 97 GKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp TCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEE
Confidence 578999966 3433 333321 1145667787 664 43 57788889999999883 3355666
Q ss_pred eecccCCeEEEEeeC-CCeEEEEeCCCcEEEEecC-----CCeeeEEecCC---CCeeEEEeecC----CeEEEEe-CCC
Q 010296 300 LFGHQSEVLTIDCLR-KERVLTVGRDRSMQLWKVP-----EESRLVFRAPA---SSLECCCFISN----DEFLSGS-DDG 365 (513)
Q Consensus 300 ~~~~~~~v~~~~~~~-~~~~~~~~~d~~i~iwd~~-----~~~~~~~~~~~---~~v~~~~~~~~----~~~~~~~-~dg 365 (513)
+.. .+.+-.+...+ .++++++-.+..|..|+.. +...+...... ..+..+++.+. +.+++++ .+.
T Consensus 176 f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~ 254 (355)
T 3amr_A 176 FKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNS 254 (355)
T ss_dssp EEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred ecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCC
Confidence 653 45677777776 4688888888777777754 22333332222 36777877533 3455444 678
Q ss_pred CEEEEecC-CCCeeEEeecC
Q 010296 366 SIELWSLL-RKKPVYIVKNA 384 (513)
Q Consensus 366 ~i~iwd~~-~~~~~~~~~~~ 384 (513)
++.+||.. +.+.+..+...
T Consensus 255 s~~Vydr~~~~~~vg~f~Ig 274 (355)
T 3amr_A 255 SYAIYDRQGKNKYVADFRIT 274 (355)
T ss_dssp EEEEEESSTTCCEEEEEEEC
T ss_pred EEEEEECCCCCcEEEEEEec
Confidence 99999996 67777777643
No 306
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.79 E-value=0.018 Score=53.23 Aligned_cols=150 Identities=10% Similarity=0.058 Sum_probs=81.2
Q ss_pred CCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC---CCEEE
Q 010296 160 QSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD---GRYLA 236 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~ 236 (513)
.....|+|.|+|++|+++...|.|++++.. +.....+. .. + ............|+|+|+ +.+|.
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~-------~~----~-~v~~~g~~g~~gia~~pdf~~~g~lY 84 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLS-------GV----P-DVWAHGQGGLLDVVLAPDFAQSRRIW 84 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCB-------SC----C-CCCCSTTCSEEEEEECTTHHHHCEEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEec-------CC----c-ccccCCCCCceeEEECCCCCCCCEEE
Confidence 456899999999945555667999999853 32211110 00 0 001122345789999995 44444
Q ss_pred EE-eC-------CCcEEEEeCCCc-------cee-eeccC---cCCCeEEEEEecCCCeEEEEeC-------------CC
Q 010296 237 SG-GL-------DRHIHLWDTRIQ-------EHI-QAFPG---HRGPVSCLTFRQGTSELFSGSF-------------DR 284 (513)
Q Consensus 237 s~-~~-------dg~i~vwd~~~~-------~~~-~~~~~---~~~~v~~~~~~~~~~~l~~~~~-------------dg 284 (513)
.+ +. ...|..|++... +.+ ..+.. .......|+|.|+|.+.++.+. .|
T Consensus 85 v~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g 164 (353)
T 2g8s_A 85 LSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQG 164 (353)
T ss_dssp EEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTT
T ss_pred EEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCe
Confidence 43 22 235666665432 111 12221 1122457999999965555433 24
Q ss_pred cEEEEeCCCCc------------eeEEe-ecccCCeEEEEeeC-CCeEEEEeC
Q 010296 285 TVKIWNAEDRA------------YISTL-FGHQSEVLTIDCLR-KERVLTVGR 323 (513)
Q Consensus 285 ~i~iwd~~~~~------------~~~~~-~~~~~~v~~~~~~~-~~~~~~~~~ 323 (513)
.|.-++....- ....+ .++ .....++|.| .+.|+++..
T Consensus 165 ~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~ 216 (353)
T 2g8s_A 165 KLVRLTDQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEH 216 (353)
T ss_dssp EEEEEETTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEec
Confidence 67777765320 11111 222 3367899999 788876654
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.74 E-value=0.011 Score=53.29 Aligned_cols=143 Identities=17% Similarity=0.213 Sum_probs=75.2
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCcc---e--eeeccCcCCCeEEEEEecCCCeEEEEeCC-----CcEEEEeCCCCc
Q 010296 231 DGRYLASGGLD-----RHIHLWDTRIQE---H--IQAFPGHRGPVSCLTFRQGTSELFSGSFD-----RTVKIWNAEDRA 295 (513)
Q Consensus 231 ~~~~l~s~~~d-----g~i~vwd~~~~~---~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~ 295 (513)
++.+++.|+.+ ..+.+||+.+.+ . +..+........++.+ ++..++.|+.+ ..+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 56777777754 468999988765 2 2222221122222222 56666666643 368899988775
Q ss_pred eeEEeecccCCe-EEEEeeCCCeEE-EEeCC-----CcEEEEecCCCeeeEEecCCCC--eeEEEeecCCe-EEEEeCC-
Q 010296 296 YISTLFGHQSEV-LTIDCLRKERVL-TVGRD-----RSMQLWKVPEESRLVFRAPASS--LECCCFISNDE-FLSGSDD- 364 (513)
Q Consensus 296 ~~~~~~~~~~~v-~~~~~~~~~~~~-~~~~d-----~~i~iwd~~~~~~~~~~~~~~~--v~~~~~~~~~~-~~~~~~d- 364 (513)
....-....... .++... ++.++ .++.+ ..+.+||+.+..-........+ -.+++.. ++. ++.|+.+
T Consensus 140 W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~ 217 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-NDHIYVVGGFDG 217 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCS
T ss_pred EEECCCCCCCcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE-CCEEEEEeCCCC
Confidence 433221111111 122222 55555 55543 5688999887765433221111 1223333 444 5566654
Q ss_pred ----CCEEEEecCCCCe
Q 010296 365 ----GSIELWSLLRKKP 377 (513)
Q Consensus 365 ----g~i~iwd~~~~~~ 377 (513)
..+.+||+.+.+-
T Consensus 218 ~~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 218 TAHLSSVEAYNIRTDSW 234 (301)
T ss_dssp SSBCCCEEEEETTTTEE
T ss_pred CcccceEEEEeCCCCcE
Confidence 4688888877643
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.73 E-value=0.027 Score=51.63 Aligned_cols=193 Identities=12% Similarity=0.189 Sum_probs=107.3
Q ss_pred CeEEEEEecCCCeEEEE------------eCCCcEEEEeCCCC--cee-EEeec-----ccCCeEEEEeeC--CC--eEE
Q 010296 264 PVSCLTFRQGTSELFSG------------SFDRTVKIWNAEDR--AYI-STLFG-----HQSEVLTIDCLR--KE--RVL 319 (513)
Q Consensus 264 ~v~~~~~~~~~~~l~~~------------~~dg~i~iwd~~~~--~~~-~~~~~-----~~~~v~~~~~~~--~~--~~~ 319 (513)
....+...|+|..++++ ..+|.|.++|+.+. +.. ..+.+ .......+.+.+ ++ +++
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 44566667765444443 26899999999742 221 11222 223566777655 34 455
Q ss_pred EEeC---CCcEEEEecCCC--eeeE---Ee-cCCCCeeEEEeecCCeEEEEeC------------------CCCEEEEec
Q 010296 320 TVGR---DRSMQLWKVPEE--SRLV---FR-APASSLECCCFISNDEFLSGSD------------------DGSIELWSL 372 (513)
Q Consensus 320 ~~~~---d~~i~iwd~~~~--~~~~---~~-~~~~~v~~~~~~~~~~~~~~~~------------------dg~i~iwd~ 372 (513)
++.. +.+|.+|++... .... +. ........+.+.++|.|.++.. .|.|..++.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 5543 466777776543 2221 11 1234577888889998665432 123333332
Q ss_pred CCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEe-cCCCcEEEEEe
Q 010296 373 LRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASG-AGNGSVRLWAI 451 (513)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g-~~dg~v~vwd~ 451 (513)
++....... ....+.++|||++++|+.+ +..+.|+.|++
T Consensus 211 --~~~~~~~~~--------------------------------------l~~pNGia~spDg~~lYvadt~~~~I~~~~~ 250 (355)
T 3sre_A 211 --NDVRVVAEG--------------------------------------FDFANGINISPDGKYVYIAELLAHKIHVYEK 250 (355)
T ss_dssp --TCCEEEEEE--------------------------------------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred --CeEEEeecC--------------------------------------CcccCcceECCCCCEEEEEeCCCCeEEEEEE
Confidence 221111110 1127899999999877665 45689999999
Q ss_pred CCCCcceeeeeecCcccEEEEEEeec-CCCEEEEEecCCCccccccc
Q 010296 452 ESETKDIQPLYNLPLVGFVNSLAFAK-SGQFLIAGVGQEPRLGRWGH 497 (513)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~v~~v~~sp-~~~~l~~~~~~dg~v~~W~~ 497 (513)
.... .+.....+...+..-.+++.+ +|.+.+++.-.-+.|..|+.
T Consensus 251 ~~~g-~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 251 HANW-TLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp CTTS-CEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred CCCC-cEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 7532 222211222356778899999 59987766223345655543
No 309
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.67 E-value=0.027 Score=50.09 Aligned_cols=222 Identities=11% Similarity=0.159 Sum_probs=134.1
Q ss_pred CCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeec
Q 010296 179 KDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAF 258 (513)
Q Consensus 179 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 258 (513)
....|.|.|+.++...... .-.--+.-.+|..+.||.-. ..++.|+|+++.+.+..+
T Consensus 47 ~~~~VvIiDl~n~~~~~Rr----------------------pi~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~ 103 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRR----------------------PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAH 103 (365)
T ss_dssp TEEEEEEEETTSTTSCEEE----------------------ECCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCCCCCcccc----------------------ccccceeeeCCCccEEEEec-CCeEEEechHHhhhhcce
Confidence 3457888898876543211 11122345688888877766 678999999999888777
Q ss_pred cCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCC-CceeEEeeccc----CCeEEEEeeCCCeEE--EEe------CCC
Q 010296 259 PGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAED-RAYISTLFGHQ----SEVLTIDCLRKERVL--TVG------RDR 325 (513)
Q Consensus 259 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~~--~~~------~d~ 325 (513)
.- ...|.--.|-... .|+..+ +..|+-|++.. ..++..+..|. ..|.....+++.+.+ +|- -.|
T Consensus 104 ~~-~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G 180 (365)
T 2xzh_A 104 TM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVG 180 (365)
T ss_dssp EC-SSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred ec-CCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccce
Confidence 63 4577777776543 344333 45799999975 34555555443 355666666666433 222 247
Q ss_pred cEEEEecCCCeeeEEecCCCCeeEEEeecCC---eEEE-EeC---CCCEEEEecCCC---CeeEEeecCCCcccCCCCcc
Q 010296 326 SMQLWKVPEESRLVFRAPASSLECCCFISND---EFLS-GSD---DGSIELWSLLRK---KPVYIVKNAHPLLDGLKNFE 395 (513)
Q Consensus 326 ~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~-~~~---dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~ 395 (513)
.+.+|....+....+.+|......+.+..+. .+++ +.. .+.++|.++... .+....+
T Consensus 181 ~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk------------- 247 (365)
T 2xzh_A 181 AMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKK------------- 247 (365)
T ss_dssp EEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCE-------------
T ss_pred eEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccc-------------
Confidence 8999999888877777775443333222111 1222 211 246777766332 1000000
Q ss_pred cCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 396 QDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 396 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
. + ...+..........++.+|+.-.+++.-+.-|.|++||+.++
T Consensus 248 --~--v-----------di~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTg 291 (365)
T 2xzh_A 248 --A--V-----------DVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG 291 (365)
T ss_dssp --E--E-----------EECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC
T ss_pred --c--c-----------eeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccC
Confidence 0 0 000111233344778999998889999999999999999998
No 310
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.63 E-value=0.013 Score=52.77 Aligned_cols=142 Identities=15% Similarity=0.149 Sum_probs=71.9
Q ss_pred CCCEEEEEe-CC-----CcEEEEeCCCcceee--eccCcCCCeEEEEEecCCCeEEEEeCC-----CcEEEEeCCCCc--
Q 010296 231 DGRYLASGG-LD-----RHIHLWDTRIQEHIQ--AFPGHRGPVSCLTFRQGTSELFSGSFD-----RTVKIWNAEDRA-- 295 (513)
Q Consensus 231 ~~~~l~s~~-~d-----g~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~-- 295 (513)
++.+++.|+ .+ ..+.+||+.+.+... .+........ ++ ..++..++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~-~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVA-SV-SLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCE-EE-EETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhcccc-EE-EECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 455666666 22 468899988765332 2221111112 22 2356666677654 468999998876
Q ss_pred -eeEEeecccCC-eEEEEeeCCCeEE-EEeCC-----CcEEEEecCCCeeeEEecC-CC-CeeEEEeecCCe-EEEEeCC
Q 010296 296 -YISTLFGHQSE-VLTIDCLRKERVL-TVGRD-----RSMQLWKVPEESRLVFRAP-AS-SLECCCFISNDE-FLSGSDD 364 (513)
Q Consensus 296 -~~~~~~~~~~~-v~~~~~~~~~~~~-~~~~d-----~~i~iwd~~~~~~~~~~~~-~~-~v~~~~~~~~~~-~~~~~~d 364 (513)
....-...... -.++... ++.++ .++.+ ..+.+||+.+..-...... .. .-.+++.. ++. ++.|+.+
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~ 169 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA-SGVIYCLGGYD 169 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE-TTEEEEECCBC
T ss_pred eeEECCCCCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE-CCEEEEECCCC
Confidence 33221111111 1122222 55555 55432 4688899887664432211 11 11222333 455 5566654
Q ss_pred -----CCEEEEecCCCC
Q 010296 365 -----GSIELWSLLRKK 376 (513)
Q Consensus 365 -----g~i~iwd~~~~~ 376 (513)
..+.+||+.+.+
T Consensus 170 ~~~~~~~~~~~d~~~~~ 186 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGH 186 (301)
T ss_dssp SSCBCCCEEEEETTTTE
T ss_pred CCcccceEEEEeCCCCc
Confidence 457788877664
No 311
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.56 E-value=0.05 Score=50.17 Aligned_cols=145 Identities=15% Similarity=0.136 Sum_probs=81.5
Q ss_pred CCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC---CCEEE
Q 010296 160 QSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD---GRYLA 236 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~ 236 (513)
.....|+|.|+|++ +++..+|.|++++. ++. ..+ ... + ...........|+|+|+ +..|+
T Consensus 29 ~~P~~ia~~pdG~l-~V~e~~g~I~~~d~-~G~--~~~-------~~~----~--v~~~g~~g~~gia~~pdf~~~g~ly 91 (354)
T 3a9g_A 29 EVPWSIAPLGGGRY-LVTERPGRLVLISP-SGK--KLV-------ASF----D--VANVGEAGLLGLALHPEFPKKSWVY 91 (354)
T ss_dssp SCEEEEEEEETTEE-EEEETTTEEEEECS-SCE--EEE-------EEC----C--CCCSTTCSEEEEEECTTTTTSCEEE
T ss_pred CCCeEEEEcCCCeE-EEEeCCCEEEEEeC-CCc--eEe-------ecc----c--eeecCCCceeeEEeCCCCCcCCEEE
Confidence 45689999999984 44556699999873 343 111 000 0 01112345889999997 44554
Q ss_pred EEeC----C----CcEEEEeCCCc-------cee-eeccC-cCCCeEEEEEecCCCeEEEEeC-------------CCcE
Q 010296 237 SGGL----D----RHIHLWDTRIQ-------EHI-QAFPG-HRGPVSCLTFRQGTSELFSGSF-------------DRTV 286 (513)
Q Consensus 237 s~~~----d----g~i~vwd~~~~-------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~-------------dg~i 286 (513)
++.. + ..|..|+.... +.+ ..+.. .......|+|.|+|.+.++.+. .|.|
T Consensus 92 v~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I 171 (354)
T 3a9g_A 92 LYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKI 171 (354)
T ss_dssp EEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEE
T ss_pred EEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEE
Confidence 4432 2 56777776543 111 11221 1123467999999986665432 2456
Q ss_pred EEEeCCCC--------c-eeEEeecccCCeEEEEeeC-CCeEEEEeC
Q 010296 287 KIWNAEDR--------A-YISTLFGHQSEVLTIDCLR-KERVLTVGR 323 (513)
Q Consensus 287 ~iwd~~~~--------~-~~~~~~~~~~~v~~~~~~~-~~~~~~~~~ 323 (513)
..++.... . .+. ..++. ....++|.| .+.++++..
T Consensus 172 ~ri~~dG~~p~~npf~~~~i~-a~G~r-np~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 172 LRVDEEGRPPADNPFPNSPIW-SYGHR-NPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp EEECTTSCCCTTSSSTTCCEE-EECCS-CCCEEEECTTTCCEEEEEC
T ss_pred EEEcCCCCCCCCCCCCCCcEE-EEccC-CcceEEEeCCCCCEEEEec
Confidence 66665432 0 111 12232 346889999 677776654
No 312
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.55 E-value=0.047 Score=49.77 Aligned_cols=251 Identities=11% Similarity=0.114 Sum_probs=128.8
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcce--eeec----cCcCCCeEEEEEecC---CCeEEEE---eCCCcEEE
Q 010296 221 KHILALAVSSDGRYLASGGLDRHIHLWDTRIQEH--IQAF----PGHRGPVSCLTFRQG---TSELFSG---SFDRTVKI 288 (513)
Q Consensus 221 ~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~----~~~~~~v~~~~~~~~---~~~l~~~---~~dg~i~i 288 (513)
...+.|+|.|+|.++++--..|.|++++...+.. +..+ .........|+|+|+ ...|+.. ..++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 3478999999999777765589999998665543 2222 223567899999995 4455443 24556666
Q ss_pred EeCCCC----------cee-EEeec-ccCCeEEEEeeCCCeEEEE-eC-------------CCcEEEEecCCC-------
Q 010296 289 WNAEDR----------AYI-STLFG-HQSEVLTIDCLRKERVLTV-GR-------------DRSMQLWKVPEE------- 335 (513)
Q Consensus 289 wd~~~~----------~~~-~~~~~-~~~~v~~~~~~~~~~~~~~-~~-------------d~~i~iwd~~~~------- 335 (513)
|.+..+ +.+ ..+.. .......|.|.|++.|+.+ +. .+.|.-++....
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 766541 111 11211 1123457899999977644 32 245555554432
Q ss_pred -eeeEEecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCC
Q 010296 336 -SRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPG 414 (513)
Q Consensus 336 -~~~~~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 414 (513)
....+.........++|.|++.|.++..... ....+..+...... . +...... ....+...+.
T Consensus 192 ~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~-------~~deln~i~~G~ny--G---wP~~~g~----~~~~~~~~P~ 255 (347)
T 3das_A 192 PGSPVYSYGHRNVQGLAWDDKQRLFASEFGQD-------TWDELNAIKPGDNY--G---WPEAEGK----GGGSGFHDPV 255 (347)
T ss_dssp TTCCEEEBCCSBCCEEEECTTCCEEEEECCSS-------SCEEEEEECTTCBC--C---TTTCCSS----CCCTTCCCCS
T ss_pred CCCeEEeeCCCCcceEEECCCCCEEEEecCCC-------CCceeeEEcCCCEe--c---CCcccCC----CCCccccCCc
Confidence 1112222223455677777776554432111 01222222211100 0 0000000 0001111111
Q ss_pred CcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcce--eeeeecCcccEEEEEEeecCCCEEEEEecCCC
Q 010296 415 SYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDI--QPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEP 490 (513)
Q Consensus 415 ~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~--~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg 490 (513)
. .-..+......++|. +|.+++..-..+.|....+....... ..+.. ...+.+..|+..|||.++++....||
T Consensus 256 ~-~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~-~~~gR~~dv~~~pDG~lyv~td~~~g 330 (347)
T 3das_A 256 A-QWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLE-GEYGRLRTVAPAGGDKLWLVTSNTDG 330 (347)
T ss_dssp E-EECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEEST-TTSSCEEEEEEEETTEEEEEECTTSS
T ss_pred E-ecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeec-CCCCCccEEEECCCCcEEEEEcCCCC
Confidence 0 001111246677776 45666666666777777776542111 11111 13468999999999998888755665
No 313
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.54 E-value=0.042 Score=48.84 Aligned_cols=197 Identities=11% Similarity=0.124 Sum_probs=124.3
Q ss_pred EEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcE
Q 010296 165 VALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHI 244 (513)
Q Consensus 165 ~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 244 (513)
.-.+|..+.||.=. ..++.|||+++...+..+ .....|..=.|-... .|+..+ +..|
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~--------------------~~~e~VvfWkWis~~-~L~lVT-~taV 128 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAH--------------------TMTDDVTFWKWISLN-TVALVT-DNAV 128 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEE--------------------ECSSCEEEEEECSSS-EEEEEE-SSEE
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcce--------------------ecCCccEEEEecCCC-eEEEEc-CCcE
Confidence 44588888777655 688999999998877644 224567777777544 444444 4679
Q ss_pred EEEeCCC-cceeeeccCcC----CCeEEEEEecCCCeEEEEeC-------CCcEEEEeCCCCceeEEeecccCCeEEEEe
Q 010296 245 HLWDTRI-QEHIQAFPGHR----GPVSCLTFRQGTSELFSGSF-------DRTVKIWNAEDRAYISTLFGHQSEVLTIDC 312 (513)
Q Consensus 245 ~vwd~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 312 (513)
+-|++.. ..++..+..|. ..|..-..+++.++++..+- .|.+.+|....+ ..+.+.+|......+..
T Consensus 129 yHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~ 207 (365)
T 2xzh_A 129 YHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKM 207 (365)
T ss_dssp EEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECC
T ss_pred EEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEec
Confidence 9999874 34555555443 35666777888888764432 478899998654 34556666554443333
Q ss_pred eCC---CeEEE-EeC---CCcEEEEecCCC---e------ee-EEecC---CCCeeEEEeecC-CeEEEEeCCCCEEEEe
Q 010296 313 LRK---ERVLT-VGR---DRSMQLWKVPEE---S------RL-VFRAP---ASSLECCCFISN-DEFLSGSDDGSIELWS 371 (513)
Q Consensus 313 ~~~---~~~~~-~~~---d~~i~iwd~~~~---~------~~-~~~~~---~~~v~~~~~~~~-~~~~~~~~dg~i~iwd 371 (513)
..+ ..+++ +.. .+.+++.++... . .. .+..+ ..-..++.+++. |.+...+.-|.|++||
T Consensus 208 ~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyD 287 (365)
T 2xzh_A 208 EGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYD 287 (365)
T ss_dssp TTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEE
T ss_pred CCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEE
Confidence 211 23333 222 368888888432 1 11 11222 233445566654 4566888999999999
Q ss_pred cCCCCeeEEeecCC
Q 010296 372 LLRKKPVYIVKNAH 385 (513)
Q Consensus 372 ~~~~~~~~~~~~~~ 385 (513)
+.++.+++.-....
T Consensus 288 leTgt~i~~nrIS~ 301 (365)
T 2xzh_A 288 LETGTCIYMNRISG 301 (365)
T ss_dssp TTTCCEEEEEECCS
T ss_pred cccCcEEEEeccCC
Confidence 99999998876443
No 314
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.50 E-value=0.023 Score=51.10 Aligned_cols=141 Identities=16% Similarity=0.243 Sum_probs=69.8
Q ss_pred CCEEEEEeCC----CcEEEEeCCCcceeee--ccCcCCCeEEEEEecCCCeEEEEeCC-----CcEEEEeCCCCceeEEe
Q 010296 232 GRYLASGGLD----RHIHLWDTRIQEHIQA--FPGHRGPVSCLTFRQGTSELFSGSFD-----RTVKIWNAEDRAYISTL 300 (513)
Q Consensus 232 ~~~l~s~~~d----g~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~ 300 (513)
+.+++.|+.+ ..+.+||+.+.+.... +......- +++. -++..++.|+.+ ..+.+||+.+.+....-
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRA-GMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccc-eEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 4455566543 4588899877653322 22111111 2222 256666677654 35889998877543321
Q ss_pred ecccCC-eEEEEeeCCCeE-EEEeCC-----CcEEEEecCCCeeeEEecCCC--CeeEEEeecCCe-EEEEeCC------
Q 010296 301 FGHQSE-VLTIDCLRKERV-LTVGRD-----RSMQLWKVPEESRLVFRAPAS--SLECCCFISNDE-FLSGSDD------ 364 (513)
Q Consensus 301 ~~~~~~-v~~~~~~~~~~~-~~~~~d-----~~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~-~~~~~~d------ 364 (513)
...... -.+++.. ++.+ +.++.+ ..+.+||+.+..-........ .-.+++.. ++. ++.|+.+
T Consensus 94 ~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~ 171 (302)
T 2xn4_A 94 NMRDRRSTLGAAVL-NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV-GGLLYAVGGYDVASRQC 171 (302)
T ss_dssp CCSSCCBSCEEEEE-TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTTTEE
T ss_pred CCCccccceEEEEE-CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE-CCEEEEEeCCCCCCCcc
Confidence 111111 1222222 4444 466644 357788887766443322111 11223333 444 5555532
Q ss_pred -CCEEEEecCCCC
Q 010296 365 -GSIELWSLLRKK 376 (513)
Q Consensus 365 -g~i~iwd~~~~~ 376 (513)
..+.+||+.+.+
T Consensus 172 ~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 172 LSTVECYNATTNE 184 (302)
T ss_dssp CCCEEEEETTTTE
T ss_pred ccEEEEEeCCCCc
Confidence 357788877654
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.49 E-value=0.039 Score=49.75 Aligned_cols=141 Identities=11% Similarity=0.103 Sum_probs=72.4
Q ss_pred CCEEEEEeC--CCcEEEEeCCCcceee--eccCcCCCeEEEEEecCCCeEEEEeCC----CcEEEEeCCCCceeEEeecc
Q 010296 232 GRYLASGGL--DRHIHLWDTRIQEHIQ--AFPGHRGPVSCLTFRQGTSELFSGSFD----RTVKIWNAEDRAYISTLFGH 303 (513)
Q Consensus 232 ~~~l~s~~~--dg~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~ 303 (513)
+.+++.|+. ...+.+||..+.+-.. .+.........+. -++..++.|+.+ ..+.+||+.+.+....-...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 345556654 3578899988765432 2222111222222 355666677654 67889999887643322111
Q ss_pred cCCe-EEEEeeCCCeEE-EEeCC------CcEEEEecCCCeeeEEecCCC--CeeEEEeecCCe-EEEEeC---------
Q 010296 304 QSEV-LTIDCLRKERVL-TVGRD------RSMQLWKVPEESRLVFRAPAS--SLECCCFISNDE-FLSGSD--------- 363 (513)
Q Consensus 304 ~~~v-~~~~~~~~~~~~-~~~~d------~~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~-~~~~~~--------- 363 (513)
.... .++... ++.++ .++.+ ..+.+||+.+..-........ .-.+++. -++. ++.|+.
T Consensus 90 ~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 90 TPRDSLAACAA-EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp SCCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEE
T ss_pred ccccceeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccc
Confidence 1111 122222 55554 56544 468899988776443322111 1112222 3455 455543
Q ss_pred CCCEEEEecCCCC
Q 010296 364 DGSIELWSLLRKK 376 (513)
Q Consensus 364 dg~i~iwd~~~~~ 376 (513)
-..+.+||+.+.+
T Consensus 168 ~~~~~~yd~~~~~ 180 (306)
T 3ii7_A 168 LNSCEVYDPATET 180 (306)
T ss_dssp CCCEEEEETTTTE
T ss_pred cceEEEeCCCCCe
Confidence 3457788887764
No 316
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.48 E-value=0.13 Score=53.07 Aligned_cols=280 Identities=11% Similarity=0.041 Sum_probs=155.9
Q ss_pred CeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeC
Q 010296 161 SVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGL 240 (513)
Q Consensus 161 ~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 240 (513)
.|.++.. .++ .|..++.+ -|..|+..++...... . ... ......|.++....++.+.+ |+.
T Consensus 104 ~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~-~---~~~-----------~l~~~~i~~i~~d~~g~lWi-gt~ 164 (758)
T 3ott_A 104 DVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFD-T---RRN-----------GLPNNTIYSIIRTKDNQIYV-GTY 164 (758)
T ss_dssp CEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEEC-H---HHH-----------CCSCSCEEEEEECTTCCEEE-EET
T ss_pred eEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEec-c---CCC-----------CcCCCeEEEEEEcCCCCEEE-EeC
Confidence 4777654 344 46666655 4677887665432210 0 000 01134588888888777554 554
Q ss_pred CCcEEEEeCCCcceeee-ccC----cCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeCC
Q 010296 241 DRHIHLWDTRIQEHIQA-FPG----HRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRK 315 (513)
Q Consensus 241 dg~i~vwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 315 (513)
. -|..++..+++.... +.. ....|.++...+++..|..|+. +.|..++..+++...........|.++...++
T Consensus 165 ~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~ 242 (758)
T 3ott_A 165 N-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGN 242 (758)
T ss_dssp T-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTT
T ss_pred C-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCC
Confidence 4 477888776653321 111 1234888888877776666664 46888998776543221112345788888888
Q ss_pred CeEEEEeCCCcEEEEecCCCeeeEEec--------CCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCc
Q 010296 316 ERVLTVGRDRSMQLWKVPEESRLVFRA--------PASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPL 387 (513)
Q Consensus 316 ~~~~~~~~d~~i~iwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 387 (513)
+.+..++. +-+.+++..+.....+.. ....|.++....+|.+..|+..| +.++.... ....+......
T Consensus 243 g~lWigT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~G-l~~~~~~~--~~~~~~~~~~~ 318 (758)
T 3ott_A 243 GDLLAGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYG-ISLSRYNS--ALQFIPISQIT 318 (758)
T ss_dssp CCEEEEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSS-EEEECCCC---CEEEEHHHHS
T ss_pred CCEEEEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCc-ccccccCC--ceeEEecccCC
Confidence 88888885 468888887655433321 22457888888888888888777 55543221 11111100000
Q ss_pred ccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCC-cceeeeee---
Q 010296 388 LDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESET-KDIQPLYN--- 463 (513)
Q Consensus 388 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~-~~~~~~~~--- 463 (513)
. ......|.++....+|.+.+. +.+| +..++..++. ..+..+..
T Consensus 319 ---------------------~---------~~~~~~v~~i~~D~~g~lWiG-t~~G-l~~~~~~~~~~~~~~~~~~~~~ 366 (758)
T 3ott_A 319 ---------------------G---------TGDGNQFYSLFRDSKGFYWFG-GANG-LIRFTDPAGERHDAIWYRMGDK 366 (758)
T ss_dssp ---------------------C---------SCCCCBEEEEEECTTCCEEEE-ETTE-EEEESCTTSSCCCCEEECTTCS
T ss_pred ---------------------C---------CCCCceEEEEEEcCCCCEEEe-eCCc-ceeecccccccceeEEeccCCc
Confidence 0 001123888888888775554 4455 5556544321 11111110
Q ss_pred --cCcccEEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 464 --LPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 464 --~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
......|.++.-..+|.+.+.+ ++-|.+|+..++
T Consensus 367 ~~~l~~~~v~~i~~d~~g~lWigt---~~GL~~~~~~~~ 402 (758)
T 3ott_A 367 TYPLSHNRIRHIYEDKEQQLWIAT---DGSINRYDYATR 402 (758)
T ss_dssp SSCCSCSCEEEEEECTTSCEEEEE---TTEEEEEETTTT
T ss_pred CCCCCCCceEEEEECCCCCEEEEe---CCcHhhcCcCCC
Confidence 0013458888888888765543 245777765443
No 317
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.47 E-value=0.14 Score=52.96 Aligned_cols=281 Identities=9% Similarity=0.047 Sum_probs=156.8
Q ss_pred CCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE
Q 010296 159 RQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG 238 (513)
Q Consensus 159 ~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 238 (513)
...|.++....++.+.+ |+..| |..++..++.......+. ........|.++...+++..|..|
T Consensus 145 ~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~~--------------~~~~~~~~i~~i~~d~~~~~lWig 208 (758)
T 3ott_A 145 NNTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFEGIPLPV--------------HSSQSNLFVNSLLEDTTRQCVWIG 208 (758)
T ss_dssp CSCEEEEEECTTCCEEE-EETTE-EEEEETTTTEEEEECCCC--------------CTTCSSCCEEEEEEETTTTEEEEE
T ss_pred CCeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceEEecCCC--------------ccccccceeEEEEEECCCCEEEEE
Confidence 35688988888877554 45544 667787665432211000 000112348889888777766666
Q ss_pred eCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEee-------cccCCeEEEE
Q 010296 239 GLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLF-------GHQSEVLTID 311 (513)
Q Consensus 239 ~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~ 311 (513)
+. +-+..++..+++...........|.++....++.+.+ |+. +-|.+++..++....... -....|.++.
T Consensus 209 t~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 285 (758)
T 3ott_A 209 TE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIF 285 (758)
T ss_dssp EE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEE
T ss_pred EC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEE
Confidence 64 4588899876654322111234578888777776544 444 458889887665432211 1233588888
Q ss_pred eeCCCeEEEEeCCCcEEEEecCCCeeeEE------ecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCe--eEEeec
Q 010296 312 CLRKERVLTVGRDRSMQLWKVPEESRLVF------RAPASSLECCCFISNDEFLSGSDDGSIELWSLLRKKP--VYIVKN 383 (513)
Q Consensus 312 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~--~~~~~~ 383 (513)
...++.+..++..| +.++.......... ......|.++....+|.+..|+..| +..++..+++. ...+..
T Consensus 286 ~D~~g~lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~G-l~~~~~~~~~~~~~~~~~~ 363 (758)
T 3ott_A 286 ADQEHNIWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGGANG-LIRFTDPAGERHDAIWYRM 363 (758)
T ss_dssp ECTTCCEEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEETTE-EEEESCTTSSCCCCEEECT
T ss_pred EcCCCCEEEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEeeCCc-ceeecccccccceeEEecc
Confidence 88888888888766 55543322111111 0123467888888888888888655 66666554321 111211
Q ss_pred CCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeee
Q 010296 384 AHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYN 463 (513)
Q Consensus 384 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~ 463 (513)
.... . ......|.++.-..+|.+-+ |+. +-|..|+..++ .+..+..
T Consensus 364 ~~~~---------------------~---------~l~~~~v~~i~~d~~g~lWi-gt~-~GL~~~~~~~~--~~~~~~~ 409 (758)
T 3ott_A 364 GDKT---------------------Y---------PLSHNRIRHIYEDKEQQLWI-ATD-GSINRYDYATR--QFIHYNI 409 (758)
T ss_dssp TCSS---------------------S---------CCSCSCEEEEEECTTSCEEE-EET-TEEEEEETTTT--EEEEEEE
T ss_pred CCcC---------------------C---------CCCCCceEEEEECCCCCEEE-EeC-CcHhhcCcCCC--cEEEeec
Confidence 0000 0 01112388888888887554 443 45888988765 2222221
Q ss_pred cC-----cccEEEEEEeecCCCEEEEEecCCCcccccc
Q 010296 464 LP-----LVGFVNSLAFAKSGQFLIAGVGQEPRLGRWG 496 (513)
Q Consensus 464 ~~-----~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~ 496 (513)
.. ....|.++...++|.+.+.+ ..+-|.+++
T Consensus 410 ~~~~~~~~~~~v~~i~~d~~g~lWigT--~~~Gl~~~~ 445 (758)
T 3ott_A 410 VDNTGTYNTNWTYYIFEDTAGQLWIST--CLGGIFVVD 445 (758)
T ss_dssp ECCC--CBSSSEEEEEECTTSEEEEEE--SSSCEEEEE
T ss_pred CCCcCCCCCceEEEEEEcCCCCEEEEE--CCCceEEEc
Confidence 01 12458888887777655533 333455554
No 318
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.47 E-value=0.068 Score=49.54 Aligned_cols=224 Identities=11% Similarity=0.137 Sum_probs=134.3
Q ss_pred CceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeecc
Q 010296 180 DGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFP 259 (513)
Q Consensus 180 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 259 (513)
...|.|.|+.++..+..- .-.--+.-.+|..+.||.-. ..++.|+|+++...+..+.
T Consensus 47 ~~~vvIiDl~~~~~~~rr----------------------pi~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~ 103 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRR----------------------PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT 103 (494)
T ss_dssp CCEEEEEETTSTTSCEEE----------------------ECCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEECCCCCcceec----------------------ccccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhccee
Confidence 347888888876543211 11122455788888777665 6899999999998887776
Q ss_pred CcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCC-CceeEEeeccc----CCeEEEEeeCCCeEE--EEe------CCCc
Q 010296 260 GHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAED-RAYISTLFGHQ----SEVLTIDCLRKERVL--TVG------RDRS 326 (513)
Q Consensus 260 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~~--~~~------~d~~ 326 (513)
- ...|.--.|-... .|+..+ +..|+-|++.. ..++..+..|. ..|.....+++.+++ +|- -.|.
T Consensus 104 ~-~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~ 180 (494)
T 1bpo_A 104 M-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA 180 (494)
T ss_dssp C-SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEE
T ss_pred c-CCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccce
Confidence 4 3456666775543 344443 46899999964 34555555443 356666666766433 222 2478
Q ss_pred EEEEecCCCeeeEEecCCCCeeEEEeecCC---eEE-EEeC---CCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcC
Q 010296 327 MQLWKVPEESRLVFRAPASSLECCCFISND---EFL-SGSD---DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEG 399 (513)
Q Consensus 327 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~---~~~-~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (513)
+.+|....+....+.+|......+.+..+. .++ .+.. .+.++|.++.... .. ...|...
T Consensus 181 mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~----------~~--~~~f~kk-- 246 (494)
T 1bpo_A 181 MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPP----------TG--NQPFPKK-- 246 (494)
T ss_dssp EEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCC----------TT--CCCCCCE--
T ss_pred EEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCc----------cC--CCCccce--
Confidence 999999888877777776544444333221 132 2222 2566666663320 00 0000000
Q ss_pred ccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 400 KISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 400 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
.....+..........++.+|+.-.+++.-+.-|.|.+||+.++
T Consensus 247 -----------~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTg 290 (494)
T 1bpo_A 247 -----------AVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG 290 (494)
T ss_dssp -----------EEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC
T ss_pred -----------eeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccc
Confidence 00001111233344788999998889999999999999999998
No 319
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.37 E-value=0.076 Score=47.78 Aligned_cols=142 Identities=11% Similarity=0.155 Sum_probs=74.6
Q ss_pred CCCEEEEEeCC----CcEEEEeCCCcceee--eccCcCCCeEEEEEecCCCeEEEEeCC------CcEEEEeCCCCceeE
Q 010296 231 DGRYLASGGLD----RHIHLWDTRIQEHIQ--AFPGHRGPVSCLTFRQGTSELFSGSFD------RTVKIWNAEDRAYIS 298 (513)
Q Consensus 231 ~~~~l~s~~~d----g~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~ 298 (513)
++.+++.|+.+ ..+.+||+.+.+... .+.........+. -++..++.|+.+ ..+.+||+.+.+...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 56677777754 678899988765432 2222111122222 256666777655 468999998875433
Q ss_pred EeecccCCe-EEEEeeCCCeEE-EEeC---------CCcEEEEecCCCeeeEEecCCC--CeeEEEeecCCe-EEEEeCC
Q 010296 299 TLFGHQSEV-LTIDCLRKERVL-TVGR---------DRSMQLWKVPEESRLVFRAPAS--SLECCCFISNDE-FLSGSDD 364 (513)
Q Consensus 299 ~~~~~~~~v-~~~~~~~~~~~~-~~~~---------d~~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~-~~~~~~d 364 (513)
.-....... .++... ++.++ .++. -..+.+||+.+..-........ .-.+++.. +++ ++.|+.+
T Consensus 133 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~ 210 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQN 210 (306)
T ss_dssp ECCCSSCCBSCEEEEE-TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEE
T ss_pred CCCCcCCcceeEEEEE-CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCC
Confidence 211111111 122222 55555 4442 3558899998876543332211 11223333 444 5566543
Q ss_pred -----CCEEEEecCCCC
Q 010296 365 -----GSIELWSLLRKK 376 (513)
Q Consensus 365 -----g~i~iwd~~~~~ 376 (513)
..+.+||+.+.+
T Consensus 211 ~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp TTEEBCCEEEEETTTTE
T ss_pred CCCCCceEEEeeCCCCc
Confidence 457788877654
No 320
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.34 E-value=0.008 Score=50.11 Aligned_cols=137 Identities=11% Similarity=0.018 Sum_probs=80.2
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCccee------eecc--CcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCC
Q 010296 222 HILALAVSSDGRYLASGGLDRHIHLWDTRIQEHI------QAFP--GHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAED 293 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~------~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 293 (513)
.+..++|+|+|.+.++ .+|.++-.+..+.... ..+- +... ..++.|.|+|.+.++ .||.|+-++..+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 5679999999986666 5787777776542211 1110 1111 478899999976666 569998888644
Q ss_pred CceeE------Ee-ecccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeee-------EEe-cCCCCeeEEEeecCCeE
Q 010296 294 RAYIS------TL-FGHQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRL-------VFR-APASSLECCCFISNDEF 358 (513)
Q Consensus 294 ~~~~~------~~-~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~-------~~~-~~~~~v~~~~~~~~~~~ 358 (513)
..... .+ ..-=..+..|.+.|+|.|.++. ++.++-+...+.... .+. ..-.....+.|.+++.|
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l 195 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTL 195 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcE
Confidence 22111 11 1112467899999999999888 888655443322110 111 12222334556677765
Q ss_pred EEEeCCC
Q 010296 359 LSGSDDG 365 (513)
Q Consensus 359 ~~~~~dg 365 (513)
.... +|
T Consensus 196 ~~v~-~g 201 (236)
T 1tl2_A 196 FGVQ-GG 201 (236)
T ss_dssp EEEE-TT
T ss_pred EEEe-CC
Confidence 5555 55
No 321
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.29 E-value=0.11 Score=48.17 Aligned_cols=197 Identities=11% Similarity=0.127 Sum_probs=123.9
Q ss_pred EEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCc
Q 010296 164 AVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRH 243 (513)
Q Consensus 164 ~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 243 (513)
+.-.+|..+.||.=. ..++.|||+++...+..+ .....|..=.|-.. +.|+..+ +..
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~--------------------~~~e~VvfWkWis~-~~l~lVT-~ta 126 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAH--------------------TMTDDVTFWKWISL-NTVALVT-DNA 126 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEE--------------------ECSSCCCEEEEEET-TEEEEEC-SSE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcce--------------------ecCCCceEEEecCC-CeEEEEc-CCe
Confidence 345678888777654 689999999998876644 22334555666543 3455444 468
Q ss_pred EEEEeCCC-cceeeeccCcC----CCeEEEEEecCCCeEEEEe-------CCCcEEEEeCCCCceeEEeecccCCeEEEE
Q 010296 244 IHLWDTRI-QEHIQAFPGHR----GPVSCLTFRQGTSELFSGS-------FDRTVKIWNAEDRAYISTLFGHQSEVLTID 311 (513)
Q Consensus 244 i~vwd~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 311 (513)
|+-|++.. ..++..|..|. ..|..-..+++.++++..+ ..|.+.+|....+ ..+.+.+|......+.
T Consensus 127 VyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~ 205 (494)
T 1bpo_A 127 VYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFK 205 (494)
T ss_dssp EEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEE
T ss_pred eEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEe
Confidence 99999964 34555555443 4566677788888877443 2478899998664 3455667766554444
Q ss_pred eeCC---CeEEE-EeC---CCcEEEEecCCC---e------ee-EEecC---CCCeeEEEeecC-CeEEEEeCCCCEEEE
Q 010296 312 CLRK---ERVLT-VGR---DRSMQLWKVPEE---S------RL-VFRAP---ASSLECCCFISN-DEFLSGSDDGSIELW 370 (513)
Q Consensus 312 ~~~~---~~~~~-~~~---d~~i~iwd~~~~---~------~~-~~~~~---~~~v~~~~~~~~-~~~~~~~~dg~i~iw 370 (513)
...+ ..+++ +.. .+.+++.++... . .. .+..+ ..-..++.+++. |.+...+.-|.|++|
T Consensus 206 ~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~ly 285 (494)
T 1bpo_A 206 MEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLY 285 (494)
T ss_dssp CTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEE
T ss_pred cCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEE
Confidence 3321 13333 332 378888888533 1 01 11111 233445666654 456688999999999
Q ss_pred ecCCCCeeEEeecC
Q 010296 371 SLLRKKPVYIVKNA 384 (513)
Q Consensus 371 d~~~~~~~~~~~~~ 384 (513)
|+.++.+++.-...
T Consensus 286 DleTgt~i~~nrIs 299 (494)
T 1bpo_A 286 DLETGTCIYMNRIS 299 (494)
T ss_dssp ETTTCCEEEEEECC
T ss_pred ecccceeeeeeccc
Confidence 99999999887643
No 322
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.29 E-value=0.091 Score=47.13 Aligned_cols=142 Identities=13% Similarity=0.223 Sum_probs=73.1
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCcceee--eccCcCCCeEEEEEecCCCeEEEEeCCC-----cEEEEeCCCCceeE
Q 010296 231 DGRYLASGGLD-----RHIHLWDTRIQEHIQ--AFPGHRGPVSCLTFRQGTSELFSGSFDR-----TVKIWNAEDRAYIS 298 (513)
Q Consensus 231 ~~~~l~s~~~d-----g~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~ 298 (513)
++.+++.|+.+ ..+.+||+.+.+... .+.........+. -++..++.|+.++ .+.+||+.+.+...
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 56777777654 358899987765332 2221111122222 2566666776553 57889988765433
Q ss_pred EeecccC-CeEEEEeeCCCeEE-EEeC-------CCcEEEEecCCCeeeEEecCCC--CeeEEEeecCCe-EEEEeCC--
Q 010296 299 TLFGHQS-EVLTIDCLRKERVL-TVGR-------DRSMQLWKVPEESRLVFRAPAS--SLECCCFISNDE-FLSGSDD-- 364 (513)
Q Consensus 299 ~~~~~~~-~v~~~~~~~~~~~~-~~~~-------d~~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~-~~~~~~d-- 364 (513)
.-..... .-.++... ++.++ .++. -..+.+||+.+..-........ .-.+++.. ++. ++.|+.+
T Consensus 139 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~ 216 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGP 216 (302)
T ss_dssp ECCCSSCCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSSS
T ss_pred cCCCCCcccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEECCCCCC
Confidence 2111111 11122222 45554 4443 2458889988775443322111 11233333 444 5666654
Q ss_pred ---CCEEEEecCCCC
Q 010296 365 ---GSIELWSLLRKK 376 (513)
Q Consensus 365 ---g~i~iwd~~~~~ 376 (513)
..+.+||+.+.+
T Consensus 217 ~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 217 LVRKSVEVYDPTTNA 231 (302)
T ss_dssp SBCCCEEEEETTTTE
T ss_pred cccceEEEEeCCCCC
Confidence 368888887754
No 323
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.28 E-value=0.005 Score=55.88 Aligned_cols=140 Identities=16% Similarity=0.076 Sum_probs=82.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCcceeeeccCc-CCCeEEEEEe--cCCCeEEEE--eCCCcEEEEeCCCCceeEEeec----
Q 010296 232 GRYLASGGLDRHIHLWDTRIQEHIQAFPGH-RGPVSCLTFR--QGTSELFSG--SFDRTVKIWNAEDRAYISTLFG---- 302 (513)
Q Consensus 232 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~--~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~---- 302 (513)
+.+++.++.||.|+-+|..+|+.+-.+... ..++....-. +.+..++.+ +.||.|+.++..+|.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 347888999999999999999988877643 1222221100 112234433 6899999999988855443321
Q ss_pred ccCCeEE-----E----EeeCCCeEEEEeCCCcEEEEecCCCeeeEEecCCCCe--------eEEEe------ecCCeEE
Q 010296 303 HQSEVLT-----I----DCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSL--------ECCCF------ISNDEFL 359 (513)
Q Consensus 303 ~~~~v~~-----~----~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v--------~~~~~------~~~~~~~ 359 (513)
...++.. + ..+.++.+++++.++.+...|+.+++.+.......+. .|... ..++.++
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ 169 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV 169 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence 1112221 0 0014678889999999999999999888544433211 11111 1123466
Q ss_pred EEeCCCCEEEEe
Q 010296 360 SGSDDGSIELWS 371 (513)
Q Consensus 360 ~~~~dg~i~iwd 371 (513)
.+..+..+.+.+
T Consensus 170 ig~~~y~v~~~~ 181 (339)
T 2be1_A 170 IGKTIFELGIHS 181 (339)
T ss_dssp EEEEEEECEECC
T ss_pred EecceEEEEEEC
Confidence 666666666666
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.27 E-value=0.0063 Score=50.74 Aligned_cols=177 Identities=9% Similarity=-0.097 Sum_probs=95.2
Q ss_pred CCeEEEEeCCCcEEEEeCCCCc------eeEEeec-ccCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCeeeE------E
Q 010296 274 TSELFSGSFDRTVKIWNAEDRA------YISTLFG-HQSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRLV------F 340 (513)
Q Consensus 274 ~~~l~~~~~dg~i~iwd~~~~~------~~~~~~~-~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~------~ 340 (513)
...|++...| +|+.=....+. ...++-. .=..+..++|+|++.|.++ .+|.++-.+..+..... .
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~ 81 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKK 81 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEE
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccE
Confidence 3456666666 66555554443 1222211 1236789999999998888 78887777765422211 1
Q ss_pred ec--CCCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCC
Q 010296 341 RA--PASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHS 418 (513)
Q Consensus 341 ~~--~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 418 (513)
.+ .-....++.|.++|.|.++ .||.|+-++..+...-.-+.. ...| .
T Consensus 82 IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~--------------a~~v----------------g 130 (236)
T 1tl2_A 82 IGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIAR--------------ATEV----------------G 130 (236)
T ss_dssp EECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHH--------------SEEE----------------E
T ss_pred ecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceecc--------------ccEe----------------c
Confidence 11 1112478889999987766 669887776432111100000 0000 0
Q ss_pred CCCcceEEEEEEecCCCEEEEecCCCcEEEEEeCCCCc-c---eeeeeecCcccEEEEEEeecCCCEEEEE
Q 010296 419 SSAYSWVSSVTVCGGSDLAASGAGNGSVRLWAIESETK-D---IQPLYNLPLVGFVNSLAFAKSGQFLIAG 485 (513)
Q Consensus 419 ~~~~~~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~-~---~~~~~~~~~~~~v~~v~~sp~~~~l~~~ 485 (513)
...-..+..|.|.|+|.+.++. |+.++-+...+... . .........-...+.+.|+|+|.+.++.
T Consensus 131 ~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 131 SGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp CSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE
T ss_pred cCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe
Confidence 1111238999999999877777 77654333222110 0 0011111122234557799999887776
No 325
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.26 E-value=0.014 Score=53.52 Aligned_cols=156 Identities=9% Similarity=0.149 Sum_probs=88.6
Q ss_pred eEEEEeeCCCeEEEEe-------------CCCcEEEEecCCC--ee--eEEec-----CCCCeeEEEeec--CC--eEE-
Q 010296 307 VLTIDCLRKERVLTVG-------------RDRSMQLWKVPEE--SR--LVFRA-----PASSLECCCFIS--ND--EFL- 359 (513)
Q Consensus 307 v~~~~~~~~~~~~~~~-------------~d~~i~iwd~~~~--~~--~~~~~-----~~~~v~~~~~~~--~~--~~~- 359 (513)
.-.+...++|.+++++ .+|.|.++|+.+. +. +.+.. .......+.+.+ ++ +|+
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 3455566777666554 6889999998742 22 23332 123455666655 34 233
Q ss_pred EEeC--CCCEEEEecCCCC-eeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCE
Q 010296 360 SGSD--DGSIELWSLLRKK-PVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDL 436 (513)
Q Consensus 360 ~~~~--dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 436 (513)
+... ..+|.+|++.... ....+.... .......+.+.+.++|.+
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~---------------------------------g~~~~~pND~~v~~~G~f 178 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIR---------------------------------HKLLPSVNDIVAVGPEHF 178 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEEC---------------------------------CTTCSSEEEEEEEETTEE
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccc---------------------------------cCCCCCCceEEEeCCCCE
Confidence 3333 4567777765432 221111100 011122889999999988
Q ss_pred EEEecC---C------------CcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCC
Q 010296 437 AASGAG---N------------GSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLP 499 (513)
Q Consensus 437 l~~g~~---d------------g~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~ 499 (513)
.++... | ..=+||.+..+ .+..+.. .-...+.++||||+++|+++-+..++|..|++..
T Consensus 179 yvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~--~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 179 YATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAE--GFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEE--EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeec--CCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 777541 1 12234444333 1222221 2345789999999999998877788999998764
No 326
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.20 E-value=0.17 Score=48.40 Aligned_cols=100 Identities=7% Similarity=0.055 Sum_probs=60.2
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcce--eeeccC------cCCCeEEEEEecC---CCeEEEEeC--------
Q 010296 222 HILALAVSSDGRYLASGGLDRHIHLWDTRIQEH--IQAFPG------HRGPVSCLTFRQG---TSELFSGSF-------- 282 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~-------- 282 (513)
..+.|+|.|+|+++++-...+.|++++..++.. +..+.. ....+..|+|+|+ +..|+.+..
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 467999999999777655445788888655543 222221 2456789999995 556654432
Q ss_pred -----CCcEEEEeCCCC--c-----eeE-Eeec-ccCCeEEEEeeCCCeEEEE
Q 010296 283 -----DRTVKIWNAEDR--A-----YIS-TLFG-HQSEVLTIDCLRKERVLTV 321 (513)
Q Consensus 283 -----dg~i~iwd~~~~--~-----~~~-~~~~-~~~~v~~~~~~~~~~~~~~ 321 (513)
...|..|++... . .+. .+.. .......|.|.|++.|+++
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~ 160 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYT 160 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEE
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEE
Confidence 235666655322 1 111 1211 1234688999999977643
No 327
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.20 E-value=0.089 Score=47.58 Aligned_cols=144 Identities=15% Similarity=0.106 Sum_probs=72.3
Q ss_pred cCCCCEEEEEeC-----C------CcEEEEeCCCcceee--eccCcCCCeEEEEEecCCCeEEEEeCC--------CcEE
Q 010296 229 SSDGRYLASGGL-----D------RHIHLWDTRIQEHIQ--AFPGHRGPVSCLTFRQGTSELFSGSFD--------RTVK 287 (513)
Q Consensus 229 s~~~~~l~s~~~-----d------g~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~ 287 (513)
..++.+++.|+. . ..+.+||+.+.+... .+....... +++.. ++..++.|+.+ ..+.
T Consensus 43 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~ 120 (315)
T 4asc_A 43 TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLF-GLGEA-LNSIYVVGGREIKDGERCLDSVM 120 (315)
T ss_dssp CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESC-EEEEE-TTEEEEECCEESSTTCCBCCCEE
T ss_pred EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhce-eEEEE-CCEEEEEeCCcCCCCCcccceEE
Confidence 346777788773 1 127788888765422 222111111 22222 55566666632 4689
Q ss_pred EEeCCCCceeEEeecccCCe-EEEEeeCCCeEE-EEeC------CCcEEEEecCCCeeeEEecCCC--CeeEEEeecCCe
Q 010296 288 IWNAEDRAYISTLFGHQSEV-LTIDCLRKERVL-TVGR------DRSMQLWKVPEESRLVFRAPAS--SLECCCFISNDE 357 (513)
Q Consensus 288 iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~-~~~~------d~~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~ 357 (513)
+||+.+.+....-....... .++.. -++.++ .++. -..+.+||+.+..-........ .-.+++.. +++
T Consensus 121 ~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~ 198 (315)
T 4asc_A 121 CYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGR 198 (315)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTE
T ss_pred EECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCE
Confidence 99998875432211111111 12222 245444 5554 2468899988765443222111 11223333 444
Q ss_pred -EEEEeCCC-----CEEEEecCCCC
Q 010296 358 -FLSGSDDG-----SIELWSLLRKK 376 (513)
Q Consensus 358 -~~~~~~dg-----~i~iwd~~~~~ 376 (513)
++.|+.++ .+.+||+.+.+
T Consensus 199 iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 199 IIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEEEEEECSSSEEEEEEEEETTTTE
T ss_pred EEEEeccCCCCccceEEEEECCCCe
Confidence 66776554 47778877664
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.0087 Score=54.33 Aligned_cols=192 Identities=11% Similarity=0.043 Sum_probs=102.6
Q ss_pred CeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEE-eCCCcEEEEeCC
Q 010296 172 SKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASG-GLDRHIHLWDTR 250 (513)
Q Consensus 172 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~i~vwd~~ 250 (513)
.+++.++.||.|.-+|..+|+....+... .+ .+......... ..++..++.. +.||.|..++..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~~------~p~~~~~~~~~-------~~~~~~~vv~p~~dG~l~a~~~~ 75 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE--NF------QPLIEIQEPSR-------LETYETLIIEPFGDGNIYYFNAH 75 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG--GS------CCSEECCCSCT-------TTSSEEEEECCSTTTEEEEEETT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC--cc------CCcEEecCCcc-------ccCCcEEEEEECCCCEEEEEECC
Confidence 46889999999999999999988765221 00 00000000000 0123333333 578999999988
Q ss_pred CcceeeeccC----cCCCeEE---EEE-----ecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccC-C------eEEEE
Q 010296 251 IQEHIQAFPG----HRGPVSC---LTF-----RQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQS-E------VLTID 311 (513)
Q Consensus 251 ~~~~~~~~~~----~~~~v~~---~~~-----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~------v~~~~ 311 (513)
+|.....+.. ...++.. ..+ ...+..+++++.+|.+...|+.+|+.+..+..... . ..|..
T Consensus 76 ~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~ 155 (339)
T 2be1_A 76 QGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSP 155 (339)
T ss_dssp TEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC-----------
T ss_pred CCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCccccccccccccc
Confidence 7754433221 1122221 000 01456788999999999999999999988753211 0 01111
Q ss_pred e------eCCCeEEEEeCCCcEEEEecCCCeeeE-----EecCCCC--ee-EEEeecCCeEEEEeCCCCEEEEecCCCCe
Q 010296 312 C------LRKERVLTVGRDRSMQLWKVPEESRLV-----FRAPASS--LE-CCCFISNDEFLSGSDDGSIELWSLLRKKP 377 (513)
Q Consensus 312 ~------~~~~~~~~~~~d~~i~iwd~~~~~~~~-----~~~~~~~--v~-~~~~~~~~~~~~~~~dg~i~iwd~~~~~~ 377 (513)
. ..++.++.+..+..+.+.+ +++.... ....... +. .-..+.++.+++++.||.|..+|..+++.
T Consensus 156 ~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~ 234 (339)
T 2be1_A 156 EEKIKLQECENMIVIGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIA 234 (339)
T ss_dssp ---------CCEEEEEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCE
T ss_pred ccccccccCCCeEEEecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcE
Confidence 1 1134566666666666655 3332110 0000000 00 00011235556788899999999888887
Q ss_pred eE
Q 010296 378 VY 379 (513)
Q Consensus 378 ~~ 379 (513)
+.
T Consensus 235 ~W 236 (339)
T 2be1_A 235 RW 236 (339)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 329
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.02 E-value=0.18 Score=45.38 Aligned_cols=142 Identities=14% Similarity=0.178 Sum_probs=72.6
Q ss_pred CCCEEEEEeC----C-----CcEEEEeCCCcceee--eccCcCCCeEEEEEecCCCeEEEEeCC-----CcEEEEeCCCC
Q 010296 231 DGRYLASGGL----D-----RHIHLWDTRIQEHIQ--AFPGHRGPVSCLTFRQGTSELFSGSFD-----RTVKIWNAEDR 294 (513)
Q Consensus 231 ~~~~l~s~~~----d-----g~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~ 294 (513)
++.+++.|+. + ..+.+||+.+.+... .+.........+.+ +++.++.|+.+ ..+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 5667777665 2 468899987765332 22221112222222 56666666543 46889999876
Q ss_pred ceeEEeecccCC-eEEEEeeCCCeEE-EEeCC-----CcEEEEecCCCeeeEEecCC--CCeeEEEeecCCe-EEEEeCC
Q 010296 295 AYISTLFGHQSE-VLTIDCLRKERVL-TVGRD-----RSMQLWKVPEESRLVFRAPA--SSLECCCFISNDE-FLSGSDD 364 (513)
Q Consensus 295 ~~~~~~~~~~~~-v~~~~~~~~~~~~-~~~~d-----~~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~-~~~~~~d 364 (513)
+....-...... -.++... ++.++ .++.+ ..+.+||+.+..-....... ....+++.. ++. ++.|+.+
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~ 225 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYD 225 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBC
T ss_pred eEeECCCCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCC
Confidence 543321111111 1122222 45554 55543 46888998776544322111 111223333 444 5566654
Q ss_pred -----CCEEEEecCCCC
Q 010296 365 -----GSIELWSLLRKK 376 (513)
Q Consensus 365 -----g~i~iwd~~~~~ 376 (513)
..+.+||+.+.+
T Consensus 226 ~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 226 GQDQLNSVERYDVETET 242 (308)
T ss_dssp SSSBCCCEEEEETTTTE
T ss_pred CCCccceEEEEeCCCCc
Confidence 458888887654
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.99 E-value=0.17 Score=45.50 Aligned_cols=142 Identities=11% Similarity=0.108 Sum_probs=70.7
Q ss_pred CCCEEEEEeC----CCcEEEEeCCCcceeee--ccCcCCCeEEEEEecCCCeEEEEeC----C-----CcEEEEeCCCCc
Q 010296 231 DGRYLASGGL----DRHIHLWDTRIQEHIQA--FPGHRGPVSCLTFRQGTSELFSGSF----D-----RTVKIWNAEDRA 295 (513)
Q Consensus 231 ~~~~l~s~~~----dg~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~----d-----g~i~iwd~~~~~ 295 (513)
++.+++.|+. -..+.+||+.+.+.... +....... +++. -++..++.|+. + ..+.+||+.+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 5667777763 24688999887654322 22111111 2222 25566666665 2 468899988765
Q ss_pred eeEEeecccCC-eEEEEeeCCCeEE-EEeCC-----CcEEEEecCCCeeeEEecCCC--CeeEEEeecCCe-EEEEeCC-
Q 010296 296 YISTLFGHQSE-VLTIDCLRKERVL-TVGRD-----RSMQLWKVPEESRLVFRAPAS--SLECCCFISNDE-FLSGSDD- 364 (513)
Q Consensus 296 ~~~~~~~~~~~-v~~~~~~~~~~~~-~~~~d-----~~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~-~~~~~~d- 364 (513)
....-...... -.++... ++.++ .++.+ ..+.+||+.+..-........ .-.+++.. ++. ++.|+.+
T Consensus 102 W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~ 179 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDG 179 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCS
T ss_pred EeECCCCCcCccccEEEEE-CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEeCCCC
Confidence 43221111111 1122222 55554 44432 468889988765443221111 11122333 444 5566654
Q ss_pred ----CCEEEEecCCCC
Q 010296 365 ----GSIELWSLLRKK 376 (513)
Q Consensus 365 ----g~i~iwd~~~~~ 376 (513)
..+.+||+.+.+
T Consensus 180 ~~~~~~~~~yd~~~~~ 195 (308)
T 1zgk_A 180 TNRLNSAECYYPERNE 195 (308)
T ss_dssp SCBCCCEEEEETTTTE
T ss_pred CCcCceEEEEeCCCCe
Confidence 457778876653
No 331
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.97 E-value=0.13 Score=49.18 Aligned_cols=57 Identities=9% Similarity=-0.039 Sum_probs=38.6
Q ss_pred ccCCeEEEEeeCCCeEEEEeCCC-cEEEEecCCCeeeEEe--c-------CCCCeeEEEeec----CCeEE
Q 010296 303 HQSEVLTIDCLRKERVLTVGRDR-SMQLWKVPEESRLVFR--A-------PASSLECCCFIS----NDEFL 359 (513)
Q Consensus 303 ~~~~v~~~~~~~~~~~~~~~~d~-~i~iwd~~~~~~~~~~--~-------~~~~v~~~~~~~----~~~~~ 359 (513)
.-...+.|+|.|+++++++...+ .|++++...+....+. . ....+..++++| ++.|.
T Consensus 25 ~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lY 95 (454)
T 1cru_A 25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIY 95 (454)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEE
T ss_pred CCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEE
Confidence 34466899999999999888876 6888876544332211 1 234567899998 55543
No 332
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.95 E-value=0.6 Score=50.29 Aligned_cols=175 Identities=8% Similarity=0.045 Sum_probs=106.0
Q ss_pred cEEEEeCCCCceeEEeecc-cCCeEEEEe---eCC--CeEEEEe----------CCCcEEEEecCCCeee--EEecCCCC
Q 010296 285 TVKIWNAEDRAYISTLFGH-QSEVLTIDC---LRK--ERVLTVG----------RDRSMQLWKVPEESRL--VFRAPASS 346 (513)
Q Consensus 285 ~i~iwd~~~~~~~~~~~~~-~~~v~~~~~---~~~--~~~~~~~----------~d~~i~iwd~~~~~~~--~~~~~~~~ 346 (513)
.|++.|..+.+.+..+.-. ...+.+++. ..+ ..+++|. ..|.|++|++...+.. ......+.
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 3667776666655544322 223445443 222 3455554 3478999998744332 23334567
Q ss_pred eeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEE
Q 010296 347 LECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVS 426 (513)
Q Consensus 347 v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~ 426 (513)
+++++-.. |+|++| ....|++|++...+.+. ..... . ..|.
T Consensus 888 v~al~~~~-g~Lla~-ig~~l~vy~l~~~~~L~-~~~~~---------------------------------~---~~i~ 928 (1158)
T 3ei3_A 888 VYSMVEFN-GKLLAS-INSTVRLYEWTTEKELR-TECNH---------------------------------Y---NNIM 928 (1158)
T ss_dssp EEEEEEET-TEEEEE-ETTEEEEEEECTTSCEE-EEEEE---------------------------------C---CCSC
T ss_pred CEEEeeeC-CEEEEE-cCCEEEEEECCCCceEE-EEeec---------------------------------c---ccEE
Confidence 88777654 565554 45789999998766444 11100 0 0022
Q ss_pred EEEEecCCCEEEEecCCCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecCCCcccccccCCC
Q 010296 427 SVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPRLGRWGHLPA 500 (513)
Q Consensus 427 ~~~~s~~~~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~v~~W~~~~~ 500 (513)
.+.....++++++|..-..|.++..+.....+..+..-.....++++.|-.++ .++.+ ..+|.|.+....+.
T Consensus 929 ~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~a-D~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 929 ALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGA-ENAFNLFVCQKDSA 1000 (1158)
T ss_dssp EEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEE-ETTSEEEEEEECTT
T ss_pred EEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEE-cCCCcEEEEecCCC
Confidence 33333356799999888888888876654556666655567779999998665 45555 88899988876653
No 333
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.91 E-value=0.21 Score=45.08 Aligned_cols=138 Identities=8% Similarity=0.031 Sum_probs=69.8
Q ss_pred EEEEEeCCCcEEEEeCCCcceee-eccCcCCCeEEEEEecCCCeEEEEeC----C-------CcEEEEeCCCCceeEEee
Q 010296 234 YLASGGLDRHIHLWDTRIQEHIQ-AFPGHRGPVSCLTFRQGTSELFSGSF----D-------RTVKIWNAEDRAYISTLF 301 (513)
Q Consensus 234 ~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~----d-------g~i~iwd~~~~~~~~~~~ 301 (513)
+++.|+ ..+.+||..+++-.. .+..........+...++..++.|+. + ..+.+||+.+.+.... .
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~-~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM-P 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC-C
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC-C
Confidence 344555 579999998876432 22212222333333456777777773 1 1278889887754322 1
Q ss_pred cccCCe--EEEEeeCCCeEE-EEeCC--------CcEEEEecCCCeeeEEecCC-C-CeeEEEeecCCe-EEEEeC-C--
Q 010296 302 GHQSEV--LTIDCLRKERVL-TVGRD--------RSMQLWKVPEESRLVFRAPA-S-SLECCCFISNDE-FLSGSD-D-- 364 (513)
Q Consensus 302 ~~~~~v--~~~~~~~~~~~~-~~~~d--------~~i~iwd~~~~~~~~~~~~~-~-~v~~~~~~~~~~-~~~~~~-d-- 364 (513)
....+- .+++.. ++.++ .++.+ ..+.+||+.+..-....... . .-.+++. .++. ++.|+. +
T Consensus 84 ~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 84 PLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDR 161 (315)
T ss_dssp CBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTS
T ss_pred CCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCC
Confidence 111111 122222 45544 55532 45888998876543322111 1 1122333 3444 556665 2
Q ss_pred ---CCEEEEecCCCC
Q 010296 365 ---GSIELWSLLRKK 376 (513)
Q Consensus 365 ---g~i~iwd~~~~~ 376 (513)
..+.+||..+.+
T Consensus 162 ~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 162 KCLNKMCVYDPKKFE 176 (315)
T ss_dssp CBCCCEEEEETTTTE
T ss_pred cccceEEEEeCCCCe
Confidence 457788877653
No 334
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.88 E-value=0.081 Score=49.00 Aligned_cols=149 Identities=13% Similarity=0.201 Sum_probs=93.5
Q ss_pred ecCCCeEEEEeCCCcEEEEeCCCCceeEEeecc----cCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCe----------
Q 010296 271 RQGTSELFSGSFDRTVKIWNAEDRAYISTLFGH----QSEVLTIDCLRKERVLTVGRDRSMQLWKVPEES---------- 336 (513)
Q Consensus 271 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~---------- 336 (513)
..++..++.+- ++.||.-++......+.+... -..+..+..+|+|.+++...+..|.|..+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccc
Confidence 34455555443 466777777643333333322 225788999999999998889999999887321
Q ss_pred ---eeEEec------CCCCeeEEEeecCC----eEEEEeCCCCEEEEecCCC--CeeEEeecCCCcccCCCCcccCcCcc
Q 010296 337 ---RLVFRA------PASSLECCCFISND----EFLSGSDDGSIELWSLLRK--KPVYIVKNAHPLLDGLKNFEQDEGKI 401 (513)
Q Consensus 337 ---~~~~~~------~~~~v~~~~~~~~~----~~~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i 401 (513)
...+.. +..+|..+.|+|-+ .+++-..|+.|++||+... +|. .+..... .+..
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~------~fg~----- 175 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNN------SFGL----- 175 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCS------EEES-----
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhcccc------ccCC-----
Confidence 111221 35679999999965 4889999999999999863 233 3321100 0000
Q ss_pred ccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEe--cCCCcEEEE
Q 010296 402 SNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASG--AGNGSVRLW 449 (513)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g--~~dg~v~vw 449 (513)
......|.+++|.+++-.|... +..|.|+-.
T Consensus 176 -----------------d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 176 -----------------DARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp -----------------CSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred -----------------CcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 1111238999999988766664 477877643
No 335
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.86 E-value=0.091 Score=48.69 Aligned_cols=151 Identities=13% Similarity=0.050 Sum_probs=82.8
Q ss_pred CCCcEEEEecCCCeee-EEecC----CCCeeEEEeecCCeEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccC
Q 010296 323 RDRSMQLWKVPEESRL-VFRAP----ASSLECCCFISNDEFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQD 397 (513)
Q Consensus 323 ~d~~i~iwd~~~~~~~-~~~~~----~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (513)
.++.||.-++...... .+... ...+..+..+|+|.+++...+..|.|..+..+.....-... ...+..
T Consensus 39 ~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~---~~~~q~---- 111 (452)
T 3pbp_A 39 QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSI---QDAFQI---- 111 (452)
T ss_dssp ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHH---HHTTEE----
T ss_pred ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccc---ccccce----
Confidence 3466666666533222 22222 33678899999999888888889999988743210000000 000000
Q ss_pred cCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCC---CEEEEecCCCcEEEEEeCCCCcceeeeeec-------Ccc
Q 010296 398 EGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGS---DLAASGAGNGSVRLWAIESETKDIQPLYNL-------PLV 467 (513)
Q Consensus 398 ~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~g~~dg~v~vwd~~~~~~~~~~~~~~-------~~~ 467 (513)
..+..... .......|..+.|+|-+ ..|++-..|+.|++||+.........+... ...
T Consensus 112 -~ty~l~~~-----------~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~ 179 (452)
T 3pbp_A 112 -FHYSIDEE-----------EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARV 179 (452)
T ss_dssp -EEEEGGGC-----------C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSC
T ss_pred -eEEEcCCc-----------ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCccc
Confidence 00000000 01123459999999954 689999999999999998632211122111 112
Q ss_pred cEEEEEEeecCCCEEEEEe-cCCCcc
Q 010296 468 GFVNSLAFAKSGQFLIAGV-GQEPRL 492 (513)
Q Consensus 468 ~~v~~v~~sp~~~~l~~~~-~~dg~v 492 (513)
..|.+++|.+++-.|.+.. ...|-|
T Consensus 180 ~ev~S~~Fg~~~lTLYvl~~t~~GDI 205 (452)
T 3pbp_A 180 NDITDLEFSKDGLTLYCLNTTEGGDI 205 (452)
T ss_dssp CCEEEEEECTTSSCEEEEECTTSCEE
T ss_pred ceEEEEEEcCCCcEEEEEecCCCCCE
Confidence 4578888988766555531 344554
No 336
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.82 E-value=0.28 Score=44.65 Aligned_cols=156 Identities=14% Similarity=0.133 Sum_probs=89.1
Q ss_pred hhhhccCCCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC-
Q 010296 153 RVLLKHRQSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD- 231 (513)
Q Consensus 153 ~~~~~h~~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~- 231 (513)
..+...-.....|+|.|+|.++++--..|.|++++..++...... .. + ............|+|+|+
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~--------~~----~-~v~~~g~~GllGia~~Pdf 91 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELG--------EV----P-GVSPSGEGGLLGIALSPDY 91 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE--------EC----T-TCCCBTTBSEEEEEECTTH
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeec--------cc----C-ceeecCCCCceeeEecccc
Confidence 334444566789999999997777665899999986655432110 00 0 011233556899999995
Q ss_pred --CCEEEEE-e--CCCcEEEEeCCCc----------cee-eeccC-cCCCeEEEEEecCCCeEEEEeC------------
Q 010296 232 --GRYLASG-G--LDRHIHLWDTRIQ----------EHI-QAFPG-HRGPVSCLTFRQGTSELFSGSF------------ 282 (513)
Q Consensus 232 --~~~l~s~-~--~dg~i~vwd~~~~----------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~------------ 282 (513)
+.+|+.. + .++.|.-|.+..+ +.+ ..+.. .......|.|.|+|.+.++.+.
T Consensus 92 ~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~ 171 (347)
T 3das_A 92 ASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKS 171 (347)
T ss_dssp HHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTC
T ss_pred ccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCC
Confidence 3444432 2 3455666665541 111 12221 1223467999999987766542
Q ss_pred -CCcEEEEeCCCC--------c-eeEEeecccCCeEEEEeeCCCeEEEEeC
Q 010296 283 -DRTVKIWNAEDR--------A-YISTLFGHQSEVLTIDCLRKERVLTVGR 323 (513)
Q Consensus 283 -dg~i~iwd~~~~--------~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 323 (513)
.|.|.-.+.... . .+. ..+|. ....++|.|++.|+++-.
T Consensus 172 ~~G~IlRi~~dG~ip~~nPf~~~~i~-a~G~R-Np~Gla~dp~G~L~~~d~ 220 (347)
T 3das_A 172 LGGKILRMTPDGEPAPGNPFPGSPVY-SYGHR-NVQGLAWDDKQRLFASEF 220 (347)
T ss_dssp STTCEEEECTTSSBCTTCSSTTCCEE-EBCCS-BCCEEEECTTCCEEEEEC
T ss_pred CCCEEEEEeCCCCccCCCCCCCCeEE-eeCCC-CcceEEECCCCCEEEEec
Confidence 355655565432 1 111 12343 356889999888877654
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.76 E-value=0.3 Score=44.09 Aligned_cols=143 Identities=13% Similarity=0.142 Sum_probs=71.1
Q ss_pred cCCCCEEEEEeC----CC-------cEEEEeCCCcceee--eccCcCCCeEEEEEecCCCeEEEEeCC-------CcEEE
Q 010296 229 SSDGRYLASGGL----DR-------HIHLWDTRIQEHIQ--AFPGHRGPVSCLTFRQGTSELFSGSFD-------RTVKI 288 (513)
Q Consensus 229 s~~~~~l~s~~~----dg-------~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~i 288 (513)
..++.+++.|+. ++ .+.+||..+.+... .+...... .+++.. ++..++.|+.+ ..+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL-FGLGEV-DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS-CEEEEE-TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc-cceEEE-CCEEEEEcCccCCCCcccceEEE
Confidence 446778888873 11 17788887665432 22211111 122222 55666666653 35888
Q ss_pred EeCCCCceeEEeecccCCe--EEEEeeCCCeEE-EEeC------CCcEEEEecCCCeeeEEecCCC--CeeEEEeecCCe
Q 010296 289 WNAEDRAYISTLFGHQSEV--LTIDCLRKERVL-TVGR------DRSMQLWKVPEESRLVFRAPAS--SLECCCFISNDE 357 (513)
Q Consensus 289 wd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~-~~~~------d~~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~ 357 (513)
||+.+.+....-. ...+. .++.. .++.++ .++. -..+.+||+.+..-........ ...+++.. ++.
T Consensus 132 yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~ 208 (318)
T 2woz_A 132 YDPVAAKWSEVKN-LPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGK 208 (318)
T ss_dssp EETTTTEEEEECC-CSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE
T ss_pred EeCCCCCEeECCC-CCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCE
Confidence 9988765433211 11111 12222 355554 5543 2458899998776443322111 11233333 444
Q ss_pred -EEEEeCC-----CCEEEEecCCCC
Q 010296 358 -FLSGSDD-----GSIELWSLLRKK 376 (513)
Q Consensus 358 -~~~~~~d-----g~i~iwd~~~~~ 376 (513)
++.|+.+ ..+.+||+.+.+
T Consensus 209 iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 209 IVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEEEcCcCCCCccceEEEEECCCCe
Confidence 5566543 246677776654
No 338
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.70 E-value=0.12 Score=55.54 Aligned_cols=200 Identities=12% Similarity=0.151 Sum_probs=114.9
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCC-ceeEEeecc
Q 010296 225 ALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDR-AYISTLFGH 303 (513)
Q Consensus 225 ~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~ 303 (513)
+.-.+|..+.+|.-. ..++.|+|+.+...+..+.- ..+|.--.|-... .|+..+ +..|+-|++... .++..+..|
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred hhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcc
Confidence 345677777666654 67899999998887776653 3466666775443 333332 457999999642 344444333
Q ss_pred ----cCCeEEEEeeCCCeEE--EEe------CCCcEEEEecCCCeeeEEecCCCCeeEEEeecC---CeEEEEe----CC
Q 010296 304 ----QSEVLTIDCLRKERVL--TVG------RDRSMQLWKVPEESRLVFRAPASSLECCCFISN---DEFLSGS----DD 364 (513)
Q Consensus 304 ----~~~v~~~~~~~~~~~~--~~~------~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~----~d 364 (513)
...|.....+++..++ +|- -.|.+.+|....+....+.+|......+....+ ..+++-. ..
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g 225 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCC
Confidence 3456666666666433 322 358899999887766655555544333332211 1122211 12
Q ss_pred CCEEEEecCCC-CeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCC
Q 010296 365 GSIELWSLLRK-KPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGN 443 (513)
Q Consensus 365 g~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d 443 (513)
+.++|.++... .....+ ... .....+..........++..|+.-.+++.-+.-
T Consensus 226 ~kLhi~Ei~~~~~~~~~f-------------~kk-------------~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~ 279 (1630)
T 1xi4_A 226 GKLHIIEVGTPPTGNQPF-------------PKK-------------AVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY 279 (1630)
T ss_pred ceEEEEecCCCccCCCCC-------------ccc-------------cccccCCcccccCcceEEEeccccCEEEEEecC
Confidence 56677666432 000000 000 000011112223346778888888888899999
Q ss_pred CcEEEEEeCCC
Q 010296 444 GSVRLWAIESE 454 (513)
Q Consensus 444 g~v~vwd~~~~ 454 (513)
|.|.+||+.++
T Consensus 280 G~~~~~d~~t~ 290 (1630)
T 1xi4_A 280 GYIHLYDLETG 290 (1630)
T ss_pred ceEEEEecccc
Confidence 99999999998
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.54 E-value=0.39 Score=44.16 Aligned_cols=52 Identities=13% Similarity=0.356 Sum_probs=27.9
Q ss_pred CCCEEEEEeC-C---------CcEEEEeCCCcceeeeccCc-CCCe-EEEEEecCCCeEEEEeCC
Q 010296 231 DGRYLASGGL-D---------RHIHLWDTRIQEHIQAFPGH-RGPV-SCLTFRQGTSELFSGSFD 283 (513)
Q Consensus 231 ~~~~l~s~~~-d---------g~i~vwd~~~~~~~~~~~~~-~~~v-~~~~~~~~~~~l~~~~~d 283 (513)
++.+++.|+. + ..+.+||+.+.+-...-... .... .+++. .+++.++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcC
Confidence 5667777765 2 46889998876543221111 1111 22222 466777777754
No 340
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.41 E-value=0.22 Score=53.56 Aligned_cols=193 Identities=10% Similarity=0.128 Sum_probs=115.7
Q ss_pred EECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEE
Q 010296 166 ALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIH 245 (513)
Q Consensus 166 ~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~ 245 (513)
-.+|..+.||.=. ..++.||++.+...+..+ ....+|..=.|-... .|+..+ +..|+
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~klks~--------------------~~~e~VvfWkWis~~-~l~lVT-~~aVy 128 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAH--------------------TMTDDVTFWKWISLN-TVALVT-DNAVY 128 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhhhccc--------------------ccCCCceEEEecCCC-eeEEEc-CCeEE
Confidence 4577777666544 688999999887766543 223456666776443 344443 45799
Q ss_pred EEeCCC-cceeeeccCc----CCCeEEEEEecCCCeEEEEe-------CCCcEEEEeCCCCceeEEeecccCCeEEEEee
Q 010296 246 LWDTRI-QEHIQAFPGH----RGPVSCLTFRQGTSELFSGS-------FDRTVKIWNAEDRAYISTLFGHQSEVLTIDCL 313 (513)
Q Consensus 246 vwd~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 313 (513)
-|++.. ..++..|..| ...|..-..+++.++++..+ ..|.+.+|....+. .+.+.||......+...
T Consensus 129 HW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~ 207 (1630)
T 1xi4_A 129 HWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKME 207 (1630)
T ss_pred EeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccC
Confidence 999964 3455555544 34566777788888877433 35888999886542 33445555544333332
Q ss_pred C---CCeEEEEe----CCCcEEEEecCCC----eee------EEecC---CCCeeEEEeecC-CeEEEEeCCCCEEEEec
Q 010296 314 R---KERVLTVG----RDRSMQLWKVPEE----SRL------VFRAP---ASSLECCCFISN-DEFLSGSDDGSIELWSL 372 (513)
Q Consensus 314 ~---~~~~~~~~----~d~~i~iwd~~~~----~~~------~~~~~---~~~v~~~~~~~~-~~~~~~~~dg~i~iwd~ 372 (513)
. ...+++-. ..+.++|.++... ... .+..+ ..-..++..++. |.+...+.-|.|++||+
T Consensus 208 ~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~ 287 (1630)
T 1xi4_A 208 GNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDL 287 (1630)
T ss_pred CCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEec
Confidence 1 12233222 2368888887443 111 11111 222334445543 45668889999999999
Q ss_pred CCCCeeEEee
Q 010296 373 LRKKPVYIVK 382 (513)
Q Consensus 373 ~~~~~~~~~~ 382 (513)
.++.+++.-.
T Consensus 288 ~t~~~i~~~r 297 (1630)
T 1xi4_A 288 ETGTCIYMNR 297 (1630)
T ss_pred ccchhhhhcc
Confidence 9999887654
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.34 E-value=0.5 Score=47.98 Aligned_cols=147 Identities=13% Similarity=0.071 Sum_probs=78.0
Q ss_pred CCCCEEEEEeCC----CcEEEEeCCCcceeeec-c------CcCCCeEEEEEec-CCCeEEEEeCC------CcEEEEeC
Q 010296 230 SDGRYLASGGLD----RHIHLWDTRIQEHIQAF-P------GHRGPVSCLTFRQ-GTSELFSGSFD------RTVKIWNA 291 (513)
Q Consensus 230 ~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~-~------~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~iwd~ 291 (513)
.++.+++.|+.+ ..+.+||+.+++....- . .....-.+++..+ ++..++.|+.+ ..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456777777743 46888998876543222 1 0111122334443 66777777653 35889998
Q ss_pred CCCceeEEeecccCCe-EEEEeeCCCeE-EEEeCCC--cEEEEecCCCeeeEEec------CCCCeeEEEeecC-Ce-EE
Q 010296 292 EDRAYISTLFGHQSEV-LTIDCLRKERV-LTVGRDR--SMQLWKVPEESRLVFRA------PASSLECCCFISN-DE-FL 359 (513)
Q Consensus 292 ~~~~~~~~~~~~~~~v-~~~~~~~~~~~-~~~~~d~--~i~iwd~~~~~~~~~~~------~~~~v~~~~~~~~-~~-~~ 359 (513)
.+.+....-....... .+++...++.+ +.||.++ .+.+||+.+..-..... ......++.+..+ +. ++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 8865433211111111 22233235544 4666443 78999998776443321 1222233444544 54 55
Q ss_pred EEeC--C-----CCEEEEecCCCC
Q 010296 360 SGSD--D-----GSIELWSLLRKK 376 (513)
Q Consensus 360 ~~~~--d-----g~i~iwd~~~~~ 376 (513)
.|+. + ..+.+||+.+..
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ECCcCCCCCeeeCcEEEEEccCCc
Confidence 6665 2 357888887766
No 342
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=96.25 E-value=0.57 Score=41.41 Aligned_cols=182 Identities=15% Similarity=0.132 Sum_probs=96.6
Q ss_pred CeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeC
Q 010296 161 SVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGL 240 (513)
Q Consensus 161 ~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 240 (513)
.|..|+...... ++. . ||.|..|-......+-. .......|..|+...... ++. .
T Consensus 25 ~i~~ia~G~~h~-~~l-~-~G~v~~wG~n~~Gqlg~-------------------p~~~~~~i~~ia~G~~hs-~~l-~- 79 (282)
T 3qhy_B 25 GVDAIAGGYFHG-LAL-K-GGKVLGWGANLNGQLTM-------------------PAATQSGVDAIAAGNYHS-LAL-K- 79 (282)
T ss_dssp SCCEEEECSSEE-EEE-E-TTEEEEEECCSSSTTSC-------------------CGGGGSCCCEEEECSSEE-EEE-E-
T ss_pred CCcEEEeCCCeE-EEE-E-CCEEEEEeCCCCCCCCC-------------------CccCCCCEEEEEeCCCEE-EEE-E-
Confidence 577777655432 233 4 89999997655433220 011123466677654333 333 4
Q ss_pred CCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeCCCeEEE
Q 010296 241 DRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRKERVLT 320 (513)
Q Consensus 241 dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 320 (513)
+|.|+.|-....-.+..-..-...|..++.... +.+.-. +|.|+.|-....-.+.........|..++.-....++
T Consensus 80 ~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~- 155 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA- 155 (282)
T ss_dssp TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE-
T ss_pred CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEE-
Confidence 899999975532211111111346777776544 344444 8999999765432222222234457777654433333
Q ss_pred EeCCCcEEEEecCCCeeeE-EecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCC
Q 010296 321 VGRDRSMQLWKVPEESRLV-FRAPASSLECCCFISNDEFLSGSDDGSIELWSLLR 374 (513)
Q Consensus 321 ~~~d~~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~ 374 (513)
.. +|.|+.|-......+. .......|..++.-....++. .+|.|..|=...
T Consensus 156 l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 156 VK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCT
T ss_pred EE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEEEEE--ECCeEEEEECCC
Confidence 33 7889888765432221 111123455555544434445 589999987544
No 343
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.05 E-value=0.76 Score=41.02 Aligned_cols=135 Identities=6% Similarity=0.034 Sum_probs=71.1
Q ss_pred CCCCEEEEEe--CCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCC--------------CcEEEEeCCC
Q 010296 230 SDGRYLASGG--LDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFD--------------RTVKIWNAED 293 (513)
Q Consensus 230 ~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~i~iwd~~~ 293 (513)
+++.+|+... .++.|+..+..... ...+... .+--+++++.+|+-+... ..|+..++..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 4567766654 24666666654333 3333321 234567889888866442 4677777776
Q ss_pred CceeEEeecccCCeEEEEeeCCC-eEEEEe----CCCcEEEEecCCCeeeEEecCCCCeeEEEeecCCe-EE-EEeCCCC
Q 010296 294 RAYISTLFGHQSEVLTIDCLRKE-RVLTVG----RDRSMQLWKVPEESRLVFRAPASSLECCCFISNDE-FL-SGSDDGS 366 (513)
Q Consensus 294 ~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~----~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~-~~~~dg~ 366 (513)
.+... +.. ... ..+++++ .++-+. ....|+..++.......+..+.. ..+++.+. |+ +......
T Consensus 98 ~~~~~-l~~--~~~--~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~ 168 (302)
T 3s25_A 98 HGSTV-LDP--DPC--IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQ 168 (302)
T ss_dssp CCCEE-EEC--SCE--EEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCC
T ss_pred CcceE-eec--CCc--cEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCce
Confidence 65332 221 122 2455544 444443 34456666666544443333322 33555554 33 4444677
Q ss_pred EEEEecCCCCee
Q 010296 367 IELWSLLRKKPV 378 (513)
Q Consensus 367 i~iwd~~~~~~~ 378 (513)
|.+.++..+...
T Consensus 169 Iy~~~l~g~~~~ 180 (302)
T 3s25_A 169 LYRYDTASQSEA 180 (302)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCCEE
Confidence 888887665543
No 344
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.90 E-value=0.93 Score=40.79 Aligned_cols=139 Identities=8% Similarity=0.069 Sum_probs=68.2
Q ss_pred EEEEEeCCCcEEEEeCCCcceee-eccCcCCCeEEEEEecCCCeEEEEeC----CC-------cEEEEeCCCCceeEEee
Q 010296 234 YLASGGLDRHIHLWDTRIQEHIQ-AFPGHRGPVSCLTFRQGTSELFSGSF----DR-------TVKIWNAEDRAYISTLF 301 (513)
Q Consensus 234 ~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~----dg-------~i~iwd~~~~~~~~~~~ 301 (513)
+++.|+. .+.+||..+.+... .+..........+...++..++.|+. ++ .+.+||..+.+....-.
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 3444443 48899988776543 11111122223333456677777773 12 17788988765433211
Q ss_pred ccc-CCeEEEEeeCCCeE-EEEeCC-------CcEEEEecCCCeeeEEecCCCCe--eEEEeecCCe-EEEEeC------
Q 010296 302 GHQ-SEVLTIDCLRKERV-LTVGRD-------RSMQLWKVPEESRLVFRAPASSL--ECCCFISNDE-FLSGSD------ 363 (513)
Q Consensus 302 ~~~-~~v~~~~~~~~~~~-~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~v--~~~~~~~~~~-~~~~~~------ 363 (513)
... ..-.++... ++.+ +.++.+ ..+.+||+.+..-........+. .+++. .++. ++.|+.
T Consensus 96 ~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 173 (318)
T 2woz_A 96 LPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKC 173 (318)
T ss_dssp BSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCB
T ss_pred CCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCc
Confidence 111 111222233 4444 466643 35788888876544332211111 12222 4555 455553
Q ss_pred CCCEEEEecCCCC
Q 010296 364 DGSIELWSLLRKK 376 (513)
Q Consensus 364 dg~i~iwd~~~~~ 376 (513)
-..+.+||+.+.+
T Consensus 174 ~~~~~~yd~~~~~ 186 (318)
T 2woz_A 174 TNRVFIYNPKKGD 186 (318)
T ss_dssp CCCEEEEETTTTE
T ss_pred cceEEEEcCCCCE
Confidence 2458888887764
No 345
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.38 E-value=1.6 Score=40.03 Aligned_cols=65 Identities=18% Similarity=0.301 Sum_probs=35.7
Q ss_pred CCCEEEEEeC-CCcEEEEeCCC--cc--eeeecc-CcCCCeEEEEEecCCCeEEEEeC-C---------CcEEEEeCCCC
Q 010296 231 DGRYLASGGL-DRHIHLWDTRI--QE--HIQAFP-GHRGPVSCLTFRQGTSELFSGSF-D---------RTVKIWNAEDR 294 (513)
Q Consensus 231 ~~~~l~s~~~-dg~i~vwd~~~--~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d---------g~i~iwd~~~~ 294 (513)
++.+++.|+. ...+.+||+.+ .+ .+..+. ...... +++.. ++.+++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQA-TSAFI-DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSC-EEEEE-TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccc-eEEEE-CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 5666677664 35688999863 22 222233 111111 22222 4566666665 2 46899999887
Q ss_pred cee
Q 010296 295 AYI 297 (513)
Q Consensus 295 ~~~ 297 (513)
+..
T Consensus 97 ~W~ 99 (357)
T 2uvk_A 97 SWV 99 (357)
T ss_dssp EEE
T ss_pred cEE
Confidence 543
No 346
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.07 E-value=1.7 Score=38.36 Aligned_cols=184 Identities=14% Similarity=0.114 Sum_probs=98.5
Q ss_pred CCeEEEEECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEe
Q 010296 160 QSVTAVALSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGG 239 (513)
Q Consensus 160 ~~V~~~~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 239 (513)
..|..|+.......+ . . ||.|..|=......+-. | ..-...|..|+..... .+.-.
T Consensus 63 ~~i~~ia~G~~hs~~-l-~-~G~v~~wG~n~~Gqlg~---------------P----~~~~~~v~~ia~G~~h--s~al~ 118 (282)
T 3qhy_B 63 SGVDAIAAGNYHSLA-L-K-DGEVIAWGGNEDGQTTV---------------P----AEARSGVDAIAAGAWA--SYALK 118 (282)
T ss_dssp SCCCEEEECSSEEEE-E-E-TTEEEEEECCTTSTTCC---------------C----GGGSSSEEEEEEETTE--EEEEE
T ss_pred CCEEEEEeCCCEEEE-E-E-CCEEEEeeCCCCCCCCC---------------C----cccCCCeEEEECcCCE--EEEEe
Confidence 357777765543333 3 4 89999987654333210 0 0112357777776443 33334
Q ss_pred CCCcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEeecccCCeEEEEeeCCCeEE
Q 010296 240 LDRHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRKERVL 319 (513)
Q Consensus 240 ~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 319 (513)
+|.|+.|-......+..-......|..++.... +.+.-. +|.|+.|-......+.........|..++.-....++
T Consensus 119 -~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs~a 194 (282)
T 3qhy_B 119 -DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHSLA 194 (282)
T ss_dssp -TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE
T ss_pred -CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEEEE
Confidence 899999976542222111112345666665433 233333 7999999765432222111223567777765444444
Q ss_pred EEeCCCcEEEEecCCCeeeE-EecCCCCeeEEEeecCCeEEEEeCCCCEEEEecCCC
Q 010296 320 TVGRDRSMQLWKVPEESRLV-FRAPASSLECCCFISNDEFLSGSDDGSIELWSLLRK 375 (513)
Q Consensus 320 ~~~~d~~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~~~ 375 (513)
. .+|.|+.|-......+- -......|..++.-....++.. +|.|..|=....
T Consensus 195 l--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~--~g~v~~wG~n~~ 247 (282)
T 3qhy_B 195 L--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK--NGKVIAWGSSRT 247 (282)
T ss_dssp E--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE--TTEEEEESTTCC
T ss_pred E--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE--CCEEEEecCCCC
Confidence 4 58999999765432221 1111234556655444444444 899999876543
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.95 E-value=1.6 Score=44.27 Aligned_cols=146 Identities=12% Similarity=0.115 Sum_probs=78.7
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCcceee--eccCcCCCeEEEEEecCCCeEEEEeCCC--cEEEEeCCCCceeEEe
Q 010296 231 DGRYLASGGLD------RHIHLWDTRIQEHIQ--AFPGHRGPVSCLTFRQGTSELFSGSFDR--TVKIWNAEDRAYISTL 300 (513)
Q Consensus 231 ~~~~l~s~~~d------g~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~ 300 (513)
++.+++.|+.+ ..+.+||+.+..... .+...... .+++...++..++.|+.++ .+.+||+.+......-
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 67777887743 357889988754332 22211111 2233324777778887654 7999999887643322
Q ss_pred e-----cccCCeEEEEeeCC-CeEE-EEeC--C-----CcEEEEecCCCe------eeEEec---CCCCeeEEEeecCCe
Q 010296 301 F-----GHQSEVLTIDCLRK-ERVL-TVGR--D-----RSMQLWKVPEES------RLVFRA---PASSLECCCFISNDE 357 (513)
Q Consensus 301 ~-----~~~~~v~~~~~~~~-~~~~-~~~~--d-----~~i~iwd~~~~~------~~~~~~---~~~~v~~~~~~~~~~ 357 (513)
. .......++.+..+ +.++ .||. + ..+.+||+.+.. -..... ....-.+++...++.
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~ 609 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRK 609 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTE
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCE
Confidence 1 11111233444544 5555 5554 2 458899998776 222111 111122334444254
Q ss_pred -EEEEeC--------CCCEEEEecCCCCe
Q 010296 358 -FLSGSD--------DGSIELWSLLRKKP 377 (513)
Q Consensus 358 -~~~~~~--------dg~i~iwd~~~~~~ 377 (513)
++.|+. ...|.+||+.+.+-
T Consensus 610 iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 610 LLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp EEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred EEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 566664 34588888877643
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.11 E-value=4.2 Score=38.75 Aligned_cols=100 Identities=9% Similarity=0.039 Sum_probs=56.9
Q ss_pred cEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCcc---eeeecc---------CcCCCeEEEEEecC---CCeEEEE-eC--
Q 010296 222 HILALAVSSDGR-YLASGGLDRHIHLWDTRIQE---HIQAFP---------GHRGPVSCLTFRQG---TSELFSG-SF-- 282 (513)
Q Consensus 222 ~v~~~~~s~~~~-~l~s~~~dg~i~vwd~~~~~---~~~~~~---------~~~~~v~~~~~~~~---~~~l~~~-~~-- 282 (513)
..+.|+|.|+|. .|+++...|.|++++..... .+..+. ........|+|+|+ ..+|++. +.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 467899999996 45556678999999754221 222221 11456889999996 2334332 21
Q ss_pred C----------CcEEEEeCCCC----------ceeEEee--cccCCeEEEEeeCCCeEEEE
Q 010296 283 D----------RTVKIWNAEDR----------AYISTLF--GHQSEVLTIDCLRKERVLTV 321 (513)
Q Consensus 283 d----------g~i~iwd~~~~----------~~~~~~~--~~~~~v~~~~~~~~~~~~~~ 321 (513)
+ ..|.-|.+..+ +.+..+. ........|.|.|++.|+.+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~ 155 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYII 155 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEE
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEE
Confidence 1 13444655421 2222222 11224578999999977643
No 349
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.85 E-value=4.1 Score=37.82 Aligned_cols=142 Identities=10% Similarity=-0.001 Sum_probs=70.7
Q ss_pred ccEEEEEEcC--CCCEEEEEeCCC----cEEEEeCCCcceeeecc------C--------cCCCeEEEEEecC--CCeEE
Q 010296 221 KHILALAVSS--DGRYLASGGLDR----HIHLWDTRIQEHIQAFP------G--------HRGPVSCLTFRQG--TSELF 278 (513)
Q Consensus 221 ~~v~~~~~s~--~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~------~--------~~~~v~~~~~~~~--~~~l~ 278 (513)
..|.+|++.| .+.+++ ++..| .|...+ ..++.-..+. . ....|.++++.|. ...|+
T Consensus 55 ~~v~~i~~dp~~~~~l~~-g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLM-AARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp SEEEEEEECSSSTTCEEE-EEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CceEEEEECCCCCCeEEE-EecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 4699999998 444444 44344 344432 2232211111 1 1124778898872 45677
Q ss_pred EEeCCCcEEEEeCCCCceeEEeec-------------------ccCCeEEEEeeC--CCeEEEEeCCCcEEEEecCCCee
Q 010296 279 SGSFDRTVKIWNAEDRAYISTLFG-------------------HQSEVLTIDCLR--KERVLTVGRDRSMQLWKVPEESR 337 (513)
Q Consensus 279 ~~~~dg~i~iwd~~~~~~~~~~~~-------------------~~~~v~~~~~~~--~~~~~~~~~d~~i~iwd~~~~~~ 337 (513)
+++..+.|...+-. ++.-..+.. ....+.+|.+.| .+.++++...+.|...+-....-
T Consensus 133 ~g~~~ggl~~S~Dg-G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW 211 (394)
T 3b7f_A 133 AGTSPQGLFRSTDH-GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDW 211 (394)
T ss_dssp EEEETTEEEEESST-TSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESSTTSSC
T ss_pred EEecCCcEEEEcCC-CCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCCCCCc
Confidence 76666666555322 222111110 123467888887 34666665555454443222111
Q ss_pred eEEec--C-----------CCCeeEEEeecC--CeEEEEeCCC
Q 010296 338 LVFRA--P-----------ASSLECCCFISN--DEFLSGSDDG 365 (513)
Q Consensus 338 ~~~~~--~-----------~~~v~~~~~~~~--~~~~~~~~dg 365 (513)
..... . ...+.++.+.|. +.++++...+
T Consensus 212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred eECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 11110 0 123778888886 5666665544
No 350
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.57 E-value=5.6 Score=38.41 Aligned_cols=71 Identities=4% Similarity=-0.010 Sum_probs=49.1
Q ss_pred cCCeEEEEeeCCCeEEEEe--CCCcEEEEecCCCe------e-------eEEecCCCCeeEEEeecCCe-EEEEeCCCCE
Q 010296 304 QSEVLTIDCLRKERVLTVG--RDRSMQLWKVPEES------R-------LVFRAPASSLECCCFISNDE-FLSGSDDGSI 367 (513)
Q Consensus 304 ~~~v~~~~~~~~~~~~~~~--~d~~i~iwd~~~~~------~-------~~~~~~~~~v~~~~~~~~~~-~~~~~~dg~i 367 (513)
......+..+|+|+.+.++ .+.++.++++.... . .............+|.++|. +.+-.-|..|
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceE
Confidence 3444567888999766443 58899999987421 1 12223445677889999996 4466689999
Q ss_pred EEEecCC
Q 010296 368 ELWSLLR 374 (513)
Q Consensus 368 ~iwd~~~ 374 (513)
.-|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999865
No 351
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=92.30 E-value=5.8 Score=35.25 Aligned_cols=138 Identities=9% Similarity=0.071 Sum_probs=73.3
Q ss_pred EEEEcCCCCEEEEEeCC--------------CcEEEEeCCCcceeeeccCcCCCeEEEEEecCCCeEEEEe----CCCcE
Q 010296 225 ALAVSSDGRYLASGGLD--------------RHIHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGS----FDRTV 286 (513)
Q Consensus 225 ~~~~s~~~~~l~s~~~d--------------g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i 286 (513)
+--+++++.+|+-+... ..|+..++..++...... .. +..|+++++.|+-.. ....|
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~---~~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP---DP--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC---SC--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec---CC--ccEEEEeCCEEEEEeecCCCCceE
Confidence 34567888888877543 367777777665332222 11 236778888888665 34456
Q ss_pred EEEeCCCCceeEEeecccCCeEEEEeeCCC-eEEEEe-CCCcEEEEecCCCeeeEEecCCCCeeEEEeecCC-eEEEEeC
Q 010296 287 KIWNAEDRAYISTLFGHQSEVLTIDCLRKE-RVLTVG-RDRSMQLWKVPEESRLVFRAPASSLECCCFISND-EFLSGSD 363 (513)
Q Consensus 287 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~-~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~ 363 (513)
+..++.... ...+..+.. ..+.+++ .++-.+ ....|.+.++.......+... ... ..+.|.+ .|+-...
T Consensus 132 y~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~--~~~-~~~~P~g~~iy~t~~ 203 (302)
T 3s25_A 132 YRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC--NCY-KPVVLDDTNVYYMDV 203 (302)
T ss_dssp EEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS--CEE-EEEEEETTEEEEEEG
T ss_pred EEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC--Ccc-ceeeecCCEEEEEEc
Confidence 666665433 344433322 3345544 444333 357888888877655443321 222 2355655 3443322
Q ss_pred C--CCEEEEecCCC
Q 010296 364 D--GSIELWSLLRK 375 (513)
Q Consensus 364 d--g~i~iwd~~~~ 375 (513)
. ..|..-++...
T Consensus 204 ~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 204 NRDNAIVHVNINNP 217 (302)
T ss_dssp GGTTEEEEECSSSC
T ss_pred CCCcEEEEEECCCC
Confidence 2 24444444433
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.17 E-value=7.3 Score=36.10 Aligned_cols=98 Identities=4% Similarity=-0.120 Sum_probs=49.5
Q ss_pred CCEEEEEeCCCcEEEEeCCC-cceeeec--cCcCCCeEEEEEec-CCCeEEEEeCCC----cEEEEeCCCCceeEEee--
Q 010296 232 GRYLASGGLDRHIHLWDTRI-QEHIQAF--PGHRGPVSCLTFRQ-GTSELFSGSFDR----TVKIWNAEDRAYISTLF-- 301 (513)
Q Consensus 232 ~~~l~s~~~dg~i~vwd~~~-~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~-- 301 (513)
...|++|+..| +.+++... +..-..+ ......|.+|++.| +...|++++..| .|...+ ..++.-..+.
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~ 99 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRP 99 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBC
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCcc
Confidence 34677777766 55555332 2211111 11235699999998 334455555454 444432 2222211111
Q ss_pred ----c--------ccCCeEEEEeeC---CCeEEEEeCCCcEEEEe
Q 010296 302 ----G--------HQSEVLTIDCLR---KERVLTVGRDRSMQLWK 331 (513)
Q Consensus 302 ----~--------~~~~v~~~~~~~---~~~~~~~~~d~~i~iwd 331 (513)
. ....|.++++.| .+.+++++..+.|...+
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~ 144 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST 144 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc
Confidence 0 112467788875 46777776666665553
No 353
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=92.11 E-value=11 Score=38.10 Aligned_cols=237 Identities=9% Similarity=0.079 Sum_probs=116.8
Q ss_pred EEEEE-EcCCCCEEEEEe-----CCCcEEEEeCCCcceee-ecc-CcCC------CeEEEEEecCCCeEEEE--------
Q 010296 223 ILALA-VSSDGRYLASGG-----LDRHIHLWDTRIQEHIQ-AFP-GHRG------PVSCLTFRQGTSELFSG-------- 280 (513)
Q Consensus 223 v~~~~-~s~~~~~l~s~~-----~dg~i~vwd~~~~~~~~-~~~-~~~~------~v~~~~~~~~~~~l~~~-------- 280 (513)
...+. ++|++++++.+- .-..|+++|+.+++.+. .|. .-.. ....++|..+...+++.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence 44555 889998877542 22469999999998763 222 0001 11345787444444432
Q ss_pred --eCCCcEEEEeCCCCce--eEEeecccCCe-EEEEeeCCCe------EEEEeC---CCcEEEEecCC--CeeeEEecCC
Q 010296 281 --SFDRTVKIWNAEDRAY--ISTLFGHQSEV-LTIDCLRKER------VLTVGR---DRSMQLWKVPE--ESRLVFRAPA 344 (513)
Q Consensus 281 --~~dg~i~iwd~~~~~~--~~~~~~~~~~v-~~~~~~~~~~------~~~~~~---d~~i~iwd~~~--~~~~~~~~~~ 344 (513)
+....|+.|.+.+... ...+.+....+ .....++++. +++.+. ...+++.+... +....+..+.
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 290 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS 290 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC
Confidence 1135688898876532 23343333333 2233344432 333332 24456656543 2222222222
Q ss_pred CCeeEEEeecCCeEEEE-----------eCCCCEEEEecCCCC-------eeEE-eecCCCcccCCCCcccCcCcccccc
Q 010296 345 SSLECCCFISNDEFLSG-----------SDDGSIELWSLLRKK-------PVYI-VKNAHPLLDGLKNFEQDEGKISNGH 405 (513)
Q Consensus 345 ~~v~~~~~~~~~~~~~~-----------~~dg~i~iwd~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~ 405 (513)
. ..+..+..+.++.. ...+.|.+.++.++. .... +.
T Consensus 291 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------------------- 345 (711)
T 4hvt_A 291 D--ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFT----------------------- 345 (711)
T ss_dssp T--CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEEC-----------------------
T ss_pred c--ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEEC-----------------------
Confidence 1 11233445554331 135566666665431 1111 11
Q ss_pred CCCCCCCCCCcCCCCCcceEEEEEEecCCCEEEEecCCCc--EEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEE
Q 010296 406 SENGNLNPGSYHSSSAYSWVSSVTVCGGSDLAASGAGNGS--VRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLI 483 (513)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~--v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~ 483 (513)
......+..+.+..+ .++++...++. |.++++.++......+..++..+.+..+.+++++..++
T Consensus 346 -------------~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~ 411 (711)
T 4hvt_A 346 -------------PTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEAL 411 (711)
T ss_dssp -------------CCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEE
T ss_pred -------------CCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEE
Confidence 112234888888876 57777777764 66777665521122212233345677777777775444
Q ss_pred -EEecC--CCcccccccC
Q 010296 484 -AGVGQ--EPRLGRWGHL 498 (513)
Q Consensus 484 -~~~~~--dg~v~~W~~~ 498 (513)
+.++. -+.+..++..
T Consensus 412 ~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 412 ITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEECSSSCCEEEEECTT
T ss_pred EEEecCCCCCEEEEEeCC
Confidence 33332 2556555543
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.67 E-value=9.4 Score=36.31 Aligned_cols=116 Identities=12% Similarity=0.055 Sum_probs=61.1
Q ss_pred CCeEEEEECCCCC-eEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCC----CCE
Q 010296 160 QSVTAVALSEDDS-KGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSD----GRY 234 (513)
Q Consensus 160 ~~V~~~~~s~~~~-~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~ 234 (513)
..-..|+|.|++. .|+++...|.|++++.........+......+. .............|+|+|+ +.+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~-------~g~~~~~e~Gllgia~~P~f~~n~~l 86 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQ-------SGIKGGDERGLLSLAFHPNYKKNGKL 86 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBC-------CCCSSSCCCSEEEEEECTTHHHHCEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceec-------cCccccCCCcceeeEeCCCCcCCCEE
Confidence 3457899999996 566667889999997543211111000000000 0000122456889999996 443
Q ss_pred EEEEeC--C----------CcEEEEeCCC----------cceeeecc--CcCCCeEEEEEecCCCeEEEEeC
Q 010296 235 LASGGL--D----------RHIHLWDTRI----------QEHIQAFP--GHRGPVSCLTFRQGTSELFSGSF 282 (513)
Q Consensus 235 l~s~~~--d----------g~i~vwd~~~----------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~ 282 (513)
.++-+. + ..|.-|.+.. .+.+..+. ........|.|.|+|.+.++.+.
T Consensus 87 Yv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 87 YVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp EEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred EEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 333221 1 1344455532 12222222 12234688999999987666554
No 355
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.50 E-value=11 Score=36.57 Aligned_cols=103 Identities=13% Similarity=0.146 Sum_probs=62.2
Q ss_pred EEEEeCCceEEEEeCCCCccccccCC--------------ChhhhccCCCCCCCCCCCCCcccEEEEEEcC---CCCEEE
Q 010296 174 GFSASKDGSILHWDVSSGKGVKYLWP--------------SEEVLKSHGAKDPQGRATKQSKHILALAVSS---DGRYLA 236 (513)
Q Consensus 174 l~t~~~dg~v~iwd~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~ 236 (513)
|.+|+..|.|+|+=+.+++.+..+.- +...+...+ ... .-..|. ..+.+.. ||++|+
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~--~~~-~gD~HH---p~~S~tdg~yDGrylf 146 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSA--KFL-NGDCHH---PHISMTDGKYDGKYLF 146 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGG--GCC-CCCCCC---CEEEEETTEEEEEEEE
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCC--Ccc-CCCcCC---CcccccCCeeeeEEEE
Confidence 56899999999999999988776520 001111000 000 001111 1234432 678888
Q ss_pred EEe-CCCcEEEEeCCCcceeeeccC-cCCCeEEEEEe--cCCCeEEEEeC
Q 010296 237 SGG-LDRHIHLWDTRIQEHIQAFPG-HRGPVSCLTFR--QGTSELFSGSF 282 (513)
Q Consensus 237 s~~-~dg~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~--~~~~~l~~~~~ 282 (513)
.-. .+..|-..++...++-..+.- ....+..+.|- |+..|+++++.
T Consensus 147 iNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e 196 (638)
T 3sbq_A 147 INDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAE 196 (638)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEEC
T ss_pred EecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecce
Confidence 776 456788888887766444432 55678888885 78888887764
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.70 E-value=15 Score=38.64 Aligned_cols=31 Identities=3% Similarity=0.000 Sum_probs=27.9
Q ss_pred eEEEEEEecCCCEEEEecCCCcEEEEEeCCC
Q 010296 424 WVSSVTVCGGSDLAASGAGNGSVRLWAIESE 454 (513)
Q Consensus 424 ~i~~~~~s~~~~~l~~g~~dg~v~vwd~~~~ 454 (513)
.+.+++..++..++++-+.|+++|||++.++
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTN 267 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTT
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCC
Confidence 3778888888899999999999999999887
No 357
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=86.07 E-value=31 Score=34.88 Aligned_cols=196 Identities=11% Similarity=0.072 Sum_probs=99.2
Q ss_pred CeEEEE-ECCCCCeEEEE-e----CCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCc-----ccEEEEEEc
Q 010296 161 SVTAVA-LSEDDSKGFSA-S----KDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQS-----KHILALAVS 229 (513)
Q Consensus 161 ~V~~~~-~s~~~~~l~t~-~----~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~s 229 (513)
....+. ++|++++++.+ + .-..|+++|+.+++.+.--+. + .... .....++|.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~------------~----~~k~~~~~~~~~~~~~W~ 193 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE------------P----ITNSGKLLEGKFTYPTWI 193 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC------------C----BCTTCCBCCEETCCEEEE
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc------------c----ccccccccccccceeeEE
Confidence 445555 89999988754 2 234699999999886542100 0 0000 011234666
Q ss_pred CCCCEEEEE----------eCCCcEEEEeCCCcc--eeeeccCcCCCe-EEEEEecCCCe-----EEEEeC---CCcEEE
Q 010296 230 SDGRYLASG----------GLDRHIHLWDTRIQE--HIQAFPGHRGPV-SCLTFRQGTSE-----LFSGSF---DRTVKI 288 (513)
Q Consensus 230 ~~~~~l~s~----------~~dg~i~vwd~~~~~--~~~~~~~~~~~v-~~~~~~~~~~~-----l~~~~~---dg~i~i 288 (513)
.+..++++. +.-..|+.|.+-+.. -...+.+....+ .....++++++ +++.+. ...+++
T Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 273 (711)
T 4hvt_A 194 NKDTIIFNLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYI 273 (711)
T ss_dssp ETTEEEECCCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEE
T ss_pred CCCEEEEEeCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEE
Confidence 444444432 112568888876542 223343333333 23445566653 444332 245666
Q ss_pred EeCCC--CceeEEeecccCCeEEEEeeCCCeEEEEe-----------CCCcEEEEecCCCe--------eeE-E-ecCCC
Q 010296 289 WNAED--RAYISTLFGHQSEVLTIDCLRKERVLTVG-----------RDRSMQLWKVPEES--------RLV-F-RAPAS 345 (513)
Q Consensus 289 wd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----------~d~~i~iwd~~~~~--------~~~-~-~~~~~ 345 (513)
.++.. ++. ..+..... ..+..+.++.++... ..+.|...++.... ... + .....
T Consensus 274 ~~~~~~~~~~-~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (711)
T 4hvt_A 274 LDTKYKNLKL-QKINMPSD--ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANE 350 (711)
T ss_dssp EECSSSSCEE-EECCSCTT--CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTE
T ss_pred EcCCCCCCcc-eEeecCCc--ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCC
Confidence 66553 332 22221111 122334455554421 45678888886531 112 2 22334
Q ss_pred CeeEEEeecCCeEEEEeCCCC--EEEEecCCC
Q 010296 346 SLECCCFISNDEFLSGSDDGS--IELWSLLRK 375 (513)
Q Consensus 346 ~v~~~~~~~~~~~~~~~~dg~--i~iwd~~~~ 375 (513)
.+..+.+..+..+++...++. |.++++.++
T Consensus 351 ~l~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g 382 (711)
T 4hvt_A 351 VFNFISTTKDRVFLATYDNVVAKVVTFTLENE 382 (711)
T ss_dssp EEEEEEECSSCEEEEEEETTEEEEEEECEETT
T ss_pred eEEEEEEECCEEEEEEEECCEEEEEEEECCCC
Confidence 566778887766667777765 556666555
No 358
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.28 E-value=5.6 Score=41.94 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=34.0
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeec
Q 010296 220 SKHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAF 258 (513)
Q Consensus 220 ~~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 258 (513)
...+.+++..++..++++-+.|+++++|++.+++++.+.
T Consensus 235 ~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 235 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred cceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 346788888889999999999999999999999987764
No 359
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=81.73 E-value=13 Score=37.22 Aligned_cols=37 Identities=24% Similarity=0.343 Sum_probs=30.0
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeecc
Q 010296 221 KHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAFP 259 (513)
Q Consensus 221 ~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 259 (513)
..|.++.+. ..+|++-+.|.++++|++.+++++....
T Consensus 222 ~~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp CEEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 456666554 6799999999999999999999876654
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=80.53 E-value=6.6 Score=38.53 Aligned_cols=62 Identities=16% Similarity=0.255 Sum_probs=43.1
Q ss_pred EEEEEEecCCCEEEEecCC----------CcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEe
Q 010296 425 VSSVTVCGGSDLAASGAGN----------GSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGV 486 (513)
Q Consensus 425 i~~~~~s~~~~~l~~g~~d----------g~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~ 486 (513)
.-.|+|+|.|.++++-..+ +.-.+|-.......+..+...+....++.++|+||++.|++..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 6789999999977765432 2223444333323556666666788999999999999998874
No 361
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=74.51 E-value=33 Score=37.08 Aligned_cols=37 Identities=16% Similarity=0.245 Sum_probs=31.3
Q ss_pred CeEEEEEecCCCeEEEEeCCCcEEEEeCCCCceeEEe
Q 010296 264 PVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTL 300 (513)
Q Consensus 264 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 300 (513)
.+.+++..++..++++-+.|++++||++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3455667778889999999999999999999988764
No 362
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=73.92 E-value=17 Score=35.37 Aligned_cols=63 Identities=14% Similarity=0.136 Sum_probs=42.4
Q ss_pred eEEEEEEecCCCEEEEecC------------CCcEEEEEeCCCCcceeeeeecCcccEEEEEEeecCCCEEEEEecC
Q 010296 424 WVSSVTVCGGSDLAASGAG------------NGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQ 488 (513)
Q Consensus 424 ~i~~~~~s~~~~~l~~g~~------------dg~v~vwd~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~ 488 (513)
....|+|.++|.+.++... .+.|..++..++ .+..+...+....++.++|+||++.|+++.-.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tG--el~~fl~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG--EIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTC--CEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCC--eEEEEEeCCCCccccCCEECCCCCEEEEEEeC
Confidence 3788999999988774321 113444444444 34445444455779999999999999988543
No 363
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=72.61 E-value=51 Score=29.20 Aligned_cols=193 Identities=11% Similarity=0.087 Sum_probs=105.5
Q ss_pred CCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 010296 169 EDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWD 248 (513)
Q Consensus 169 ~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd 248 (513)
|+..++++.+.+|.|+--.+..-..... +..........-...+..+........++..+..|.++-..
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~-----------~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~ 74 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGT-----------GGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLIN 74 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCS-----------SCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEE
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhcccc-----------CCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEE
Confidence 4667889999999999776543321110 00000000011223455555555566777788888877765
Q ss_pred CCC---------ccee---eeccCcCCCeEEEEEec---CCCeEEEEeCCCcEEEEeCCCC-------ceeEEeecccCC
Q 010296 249 TRI---------QEHI---QAFPGHRGPVSCLTFRQ---GTSELFSGSFDRTVKIWNAEDR-------AYISTLFGHQSE 306 (513)
Q Consensus 249 ~~~---------~~~~---~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~ 306 (513)
... |..+ ..+. ....|.++...+ ...+|+..+..|.++...+... .....+.. ...
T Consensus 75 ~~~ip~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~ 152 (312)
T 1suu_A 75 AYEIKDSSRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDF 152 (312)
T ss_dssp GGGSCC-------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCC
T ss_pred HHHCCCCCccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCE
Confidence 431 1111 1122 233455554433 4677889999999999887432 22223332 445
Q ss_pred eEEEEee-CCCeEEEEeCCCcEEEEecCCCee---------eEEecCCCCeeEEEee-cCCeEEEEeCCCCEEEEecCC
Q 010296 307 VLTIDCL-RKERVLTVGRDRSMQLWKVPEESR---------LVFRAPASSLECCCFI-SNDEFLSGSDDGSIELWSLLR 374 (513)
Q Consensus 307 v~~~~~~-~~~~~~~~~~d~~i~iwd~~~~~~---------~~~~~~~~~v~~~~~~-~~~~~~~~~~dg~i~iwd~~~ 374 (513)
+..+... ++..++..+..|.+..+....-.. .........+..+... ++..+++.+..|......+..
T Consensus 153 lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 153 VTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 5555444 456788999999999887753111 1111223445554443 334577788888877776643
No 364
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=72.55 E-value=48 Score=28.79 Aligned_cols=152 Identities=10% Similarity=-0.009 Sum_probs=85.8
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEe---CCCcceeeeccCcCCCeEEEEEec--CCCeEEEEeCCCcEEEEeCCCC
Q 010296 220 SKHILALAVSSDGRYLASGGLDRHIHLWD---TRIQEHIQAFPGHRGPVSCLTFRQ--GTSELFSGSFDRTVKIWNAEDR 294 (513)
Q Consensus 220 ~~~v~~~~~s~~~~~l~s~~~dg~i~vwd---~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~ 294 (513)
...+..+.......+|+.-+..|.++--. +........+. ....|..+.. + +..+++..+..|.|+...+...
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~ 100 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEF 100 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGT
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHh
Confidence 34455555555556677777788776543 22221111133 3456666644 4 4678999999999999987543
Q ss_pred c------eeEEeecccCCeEEEEe-eCCCeEEEEeCCCcEEEEecCCCee---------eEEecCCCCeeEEEeec-CCe
Q 010296 295 A------YISTLFGHQSEVLTIDC-LRKERVLTVGRDRSMQLWKVPEESR---------LVFRAPASSLECCCFIS-NDE 357 (513)
Q Consensus 295 ~------~~~~~~~~~~~v~~~~~-~~~~~~~~~~~d~~i~iwd~~~~~~---------~~~~~~~~~v~~~~~~~-~~~ 357 (513)
. ....+.. ...+..+.. ..+..++..+..|.+..+....-.. .........+..+...+ +..
T Consensus 101 ~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ 179 (276)
T 3no0_A 101 EYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPY 179 (276)
T ss_dssp TTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSE
T ss_pred hhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCE
Confidence 2 1122222 234444433 3455788899999988887532111 11112234454444333 345
Q ss_pred EEEEeCCCCEEEEecCC
Q 010296 358 FLSGSDDGSIELWSLLR 374 (513)
Q Consensus 358 ~~~~~~dg~i~iwd~~~ 374 (513)
++..+..|.++...+..
T Consensus 180 ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 180 LLVITAKGRVKKISHEE 196 (276)
T ss_dssp EEEEETTSCEEEEEGGG
T ss_pred EEEEeCCCcEEEeEHHH
Confidence 77888888887776543
No 365
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=70.94 E-value=52 Score=28.55 Aligned_cols=157 Identities=11% Similarity=0.064 Sum_probs=89.0
Q ss_pred CCCeEEEEECC--CCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEE
Q 010296 159 RQSVTAVALSE--DDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLA 236 (513)
Q Consensus 159 ~~~V~~~~~s~--~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 236 (513)
...|.++.. + +..+++..+..|.++...+..-. ... . -... ..+ .-...+..+........|+
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~-~~~---~--G~~~-------i~l-kegD~l~~~~~~~~~~~il 131 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFE-YKA---Q--GMPI-------IKL-TEGDEVVSIASSVDETHIL 131 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTT-TCS---T--TEEC-------SCC-CTTCCEEEEEECCSSCEEE
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhh-hhc---C--CeEE-------Eec-CCCCEEEEEEEeCCCCEEE
Confidence 456666654 4 56789999999999998875432 110 0 0000 011 1234566665555666788
Q ss_pred EEeCCCcEEEEeCCC---------cceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCCCc-------eeEEe
Q 010296 237 SGGLDRHIHLWDTRI---------QEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRA-------YISTL 300 (513)
Q Consensus 237 s~~~dg~i~vwd~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~ 300 (513)
..+..|.+..+.... |.....+. ....|.++...+++..++..+..|.++...+.... -+..+
T Consensus 132 l~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i 210 (276)
T 3no0_A 132 LFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS 210 (276)
T ss_dssp EEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC
T ss_pred EEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE
Confidence 888899988887532 11122233 23566666666667788999999999888764321 12222
Q ss_pred ecccCCeEEEEe-eCCCeEEEEeCCCcEEE--Eec
Q 010296 301 FGHQSEVLTIDC-LRKERVLTVGRDRSMQL--WKV 332 (513)
Q Consensus 301 ~~~~~~v~~~~~-~~~~~~~~~~~d~~i~i--wd~ 332 (513)
...+.+..+.. ..+..++..+..|.+.. ++.
T Consensus 211 -~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~ 244 (276)
T 3no0_A 211 -GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQ 244 (276)
T ss_dssp -CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEG
T ss_pred -cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCH
Confidence 12333433322 22335555666666555 554
No 366
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=69.05 E-value=64 Score=28.84 Aligned_cols=152 Identities=11% Similarity=0.039 Sum_probs=87.4
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEe---CCC------cceeee---ccCcCCCeEEEEEec---CCCeEEEEeCCC
Q 010296 220 SKHILALAVSSDGRYLASGGLDRHIHLWD---TRI------QEHIQA---FPGHRGPVSCLTFRQ---GTSELFSGSFDR 284 (513)
Q Consensus 220 ~~~v~~~~~s~~~~~l~s~~~dg~i~vwd---~~~------~~~~~~---~~~~~~~v~~~~~~~---~~~~l~~~~~dg 284 (513)
...+..+........|+.-+..|.++-.. +.. |.++.. +. ....|.++...+ +..+++.++..|
T Consensus 41 ~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G 119 (327)
T 3uc1_A 41 DDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNG 119 (327)
T ss_dssp GGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTS
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCC
Confidence 44455555555566677677778766544 332 222211 22 344566654443 477899999999
Q ss_pred cEEEEeCCCCc-------eeEEeecccCCeEEE-EeeCCCeEEEEeCCCcEEEEecC--CCeee---------EEecCCC
Q 010296 285 TVKIWNAEDRA-------YISTLFGHQSEVLTI-DCLRKERVLTVGRDRSMQLWKVP--EESRL---------VFRAPAS 345 (513)
Q Consensus 285 ~i~iwd~~~~~-------~~~~~~~~~~~v~~~-~~~~~~~~~~~~~d~~i~iwd~~--~~~~~---------~~~~~~~ 345 (513)
.|+...+.... ....+.. ...+..+ .......++..+..|.+..+... .-... .......
T Consensus 120 ~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d 198 (327)
T 3uc1_A 120 LVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDD 198 (327)
T ss_dssp EEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTC
T ss_pred EEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCC
Confidence 99998865422 1122332 3334443 34455678889999998888766 21111 1112334
Q ss_pred CeeEEEeec-CCeEEEEeCCCCEEEEecC
Q 010296 346 SLECCCFIS-NDEFLSGSDDGSIELWSLL 373 (513)
Q Consensus 346 ~v~~~~~~~-~~~~~~~~~dg~i~iwd~~ 373 (513)
.|..+...+ +..++..+..|.++.-.+.
T Consensus 199 ~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 199 RLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp CEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 455554443 3467788888887776653
No 367
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=67.43 E-value=75 Score=29.00 Aligned_cols=144 Identities=8% Similarity=-0.007 Sum_probs=83.5
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCC---------cceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeC---CC---
Q 010296 229 SSDGRYLASGGLDRHIHLWDTRI---------QEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNA---ED--- 293 (513)
Q Consensus 229 s~~~~~l~s~~~dg~i~vwd~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~---~~--- 293 (513)
-|+..++++.+.+|.|+--.+.. +.....++ ....+..+........|+..+..|.++-+.. ..
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 46778899999999999765432 12222333 3455666666666677887888887766543 21
Q ss_pred ---CceeEEe-e-cccCCeEEEEee----CCCeEEEEeCCCcEEEEecCCCe------ee--EEecCCCCeeEEEee-cC
Q 010296 294 ---RAYISTL-F-GHQSEVLTIDCL----RKERVLTVGRDRSMQLWKVPEES------RL--VFRAPASSLECCCFI-SN 355 (513)
Q Consensus 294 ---~~~~~~~-~-~~~~~v~~~~~~----~~~~~~~~~~d~~i~iwd~~~~~------~~--~~~~~~~~v~~~~~~-~~ 355 (513)
|..+..+ . .....|.++... ++..++.++..|.++...+..-. .. .+. ....+..+... .+
T Consensus 83 ~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~-~~d~lv~v~~~~~~ 161 (370)
T 3l6v_A 83 NARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLD-EGDALVGVALTDGD 161 (370)
T ss_dssp TSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCC-TTCCEEEEEEECSC
T ss_pred ccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeC-CCCEEEEEEEeCCC
Confidence 2222111 1 123456655543 34478899999999988764321 11 121 23334333333 33
Q ss_pred CeEEEEeCCCCEEEEecCC
Q 010296 356 DEFLSGSDDGSIELWSLLR 374 (513)
Q Consensus 356 ~~~~~~~~dg~i~iwd~~~ 374 (513)
..++..+..|.+..+....
T Consensus 162 ~~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 162 RDVLLFASNGKTVRFGEST 180 (370)
T ss_dssp CEEEEEETTSEEEEEEGGG
T ss_pred ceEEEEeCCCeEEEEEccc
Confidence 4577788888877776543
No 368
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=66.84 E-value=78 Score=28.99 Aligned_cols=88 Identities=11% Similarity=0.149 Sum_probs=55.0
Q ss_pred cCCCeEEEEECCCCCeEE--EEeC-------------CceEEEEeCCCC--ccccccCCChhhhccCCCCCCCCCCCCCc
Q 010296 158 HRQSVTAVALSEDDSKGF--SASK-------------DGSILHWDVSSG--KGVKYLWPSEEVLKSHGAKDPQGRATKQS 220 (513)
Q Consensus 158 h~~~V~~~~~s~~~~~l~--t~~~-------------dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (513)
+--.|..+...+.+++-+ +|-- --.|.+||+.+. +.++.+.-..... ...
T Consensus 85 ~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~-------------~~~ 151 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLV-------------EKP 151 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGC-------------CCG
T ss_pred ceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhc-------------ccC
Confidence 345688888888776544 3311 126889999999 8777662222211 123
Q ss_pred ccEEEEEEc---CC----CCEEEEEe-CCCcEEEEeCCCcceeeec
Q 010296 221 KHILALAVS---SD----GRYLASGG-LDRHIHLWDTRIQEHIQAF 258 (513)
Q Consensus 221 ~~v~~~~~s---~~----~~~l~s~~-~dg~i~vwd~~~~~~~~~~ 258 (513)
..+..+.+. |. +.++.... ..+.|.|+|+.+++..+.+
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVT 197 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEc
Confidence 457788887 22 34444443 4678999999998877665
No 369
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=66.79 E-value=78 Score=28.99 Aligned_cols=216 Identities=8% Similarity=0.081 Sum_probs=113.3
Q ss_pred CcccEEEEEEcCCCCEEEE--EeC-------------CCcEEEEeCCCc--ceeeeccC------cCCCeEEEEEe---c
Q 010296 219 QSKHILALAVSSDGRYLAS--GGL-------------DRHIHLWDTRIQ--EHIQAFPG------HRGPVSCLTFR---Q 272 (513)
Q Consensus 219 ~~~~v~~~~~s~~~~~l~s--~~~-------------dg~i~vwd~~~~--~~~~~~~~------~~~~v~~~~~~---~ 272 (513)
+--.|..+...+.+++-+. |-. -..|.+||+.++ +.++++.- ....+..+.+. |
T Consensus 85 ~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANP 164 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCT
T ss_pred ceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccC
Confidence 3456888888887764332 211 125889999999 88876643 23467888887 2
Q ss_pred C----CCeEEEEe-CCCcEEEEeCCCCceeEEeecccCCeEEEEeeCCC-eEEEEeCCCcEEEEecCCCeeeEEecCCCC
Q 010296 273 G----TSELFSGS-FDRTVKIWNAEDRAYISTLFGHQSEVLTIDCLRKE-RVLTVGRDRSMQLWKVPEESRLVFRAPASS 346 (513)
Q Consensus 273 ~----~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 346 (513)
. +.+++.+. ..+.|.|+|+.+++.-+.+. .. +.|+. ..++. +|.-..| ...
T Consensus 165 ~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~--~~------~~pd~~~~~~i--~G~~~~~-------------~~G 221 (381)
T 3q6k_A 165 KGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH--PT------FKAERPTKFDY--GGKEYEF-------------KAG 221 (381)
T ss_dssp TTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC--GG------GSCCSCEEEEE--TTEEEEE-------------CCC
T ss_pred CCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc--CC------CccccCcceEE--CCEEeEe-------------ccC
Confidence 2 33444433 46789999999988766552 21 23331 11111 1221111 245
Q ss_pred eeEEEeecC----Ce-EEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCC
Q 010296 347 LECCCFISN----DE-FLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSA 421 (513)
Q Consensus 347 v~~~~~~~~----~~-~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 421 (513)
+..++++|+ ++ |.-....+ -++|.+.+.- +.... + ...+.. +...+.
T Consensus 222 i~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~----L~~~~-----~------~~~v~~------------~G~kg~ 273 (381)
T 3q6k_A 222 IFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKE----LKQKG-----G------KLNPEL------------LGNRGK 273 (381)
T ss_dssp EEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHH----HSSTT-----C------CCCCEE------------EEECCT
T ss_pred ceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHH----hhCcc-----h------hhceEE------------eeecCC
Confidence 777888876 33 22211111 1233222110 00000 0 000000 000000
Q ss_pred cceEEEEEEe-cCCCEEEEecCCCcEEEEEeCC-CC--cceeeeeecCcccEEEEEEeecCCCEEEEE
Q 010296 422 YSWVSSVTVC-GGSDLAASGAGNGSVRLWAIES-ET--KDIQPLYNLPLVGFVNSLAFAKSGQFLIAG 485 (513)
Q Consensus 422 ~~~i~~~~~s-~~~~~l~~g~~dg~v~vwd~~~-~~--~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~ 485 (513)
...-..+++. .+|.++++--..+.|..|+... .- .....+..-+.-..+..+.+.++|.+.+++
T Consensus 274 ~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 274 YNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp TCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred CCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 1124456675 6787788778888999999876 21 223344333334457888888888877766
No 370
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=66.35 E-value=48 Score=33.27 Aligned_cols=32 Identities=6% Similarity=0.167 Sum_probs=27.2
Q ss_pred eecCCeEEEEeCCCCEEEEecCCCCeeEEeec
Q 010296 352 FISNDEFLSGSDDGSIELWSLLRKKPVYIVKN 383 (513)
Q Consensus 352 ~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~ 383 (513)
..++..+++-+.|.++|+|++.+++++.+...
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34466788999999999999999999888765
No 371
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=66.22 E-value=73 Score=28.45 Aligned_cols=152 Identities=10% Similarity=0.067 Sum_probs=87.9
Q ss_pred ccEEEEEEcC---CCCEEEEEeCCCcEEEEeCCCc-------ceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEe
Q 010296 221 KHILALAVSS---DGRYLASGGLDRHIHLWDTRIQ-------EHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWN 290 (513)
Q Consensus 221 ~~v~~~~~s~---~~~~l~s~~~dg~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 290 (513)
..|.++..-+ +..+++..+..|.|+...+..- .....++. ...+..+........|+..+..|.+..+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 3455544333 5779999999999999876532 22223443 34555555555667788888999988887
Q ss_pred CC--CCce-------e--EEeecccCCeEEEEeeC-CCeEEEEeCCCcEEEEecCCCe--------ee--EEecCCCCee
Q 010296 291 AE--DRAY-------I--STLFGHQSEVLTIDCLR-KERVLTVGRDRSMQLWKVPEES--------RL--VFRAPASSLE 348 (513)
Q Consensus 291 ~~--~~~~-------~--~~~~~~~~~v~~~~~~~-~~~~~~~~~d~~i~iwd~~~~~--------~~--~~~~~~~~v~ 348 (513)
.. .-.. + ..+. ....|.++...+ +..++.++..|.++.-.+..-. .. .+......+.
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv 252 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLV 252 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEE
T ss_pred CcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEE
Confidence 76 2111 1 1122 234566665544 4578899999998887753211 11 1111123344
Q ss_pred EEEee-cCCeEEEEeCCCCEEEEecCC
Q 010296 349 CCCFI-SNDEFLSGSDDGSIELWSLLR 374 (513)
Q Consensus 349 ~~~~~-~~~~~~~~~~dg~i~iwd~~~ 374 (513)
.+... .+..++..+..|.+..+....
T Consensus 253 ~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 253 GALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 33332 334566777777776666543
No 372
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=65.50 E-value=14 Score=40.00 Aligned_cols=38 Identities=16% Similarity=0.235 Sum_probs=32.2
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcceeeec
Q 010296 221 KHILALAVSSDGRYLASGGLDRHIHLWDTRIQEHIQAF 258 (513)
Q Consensus 221 ~~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 258 (513)
..+.+++..++..++++-+.|++++||++.+++++.+.
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 34566677788899999999999999999999987764
No 373
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=60.81 E-value=28 Score=34.16 Aligned_cols=59 Identities=20% Similarity=0.204 Sum_probs=42.4
Q ss_pred cEEEEEEcCCCCEEEEEeCC------------CcEEEEeCCCcceeeeccCc-CCCeEEEEEecCCCeEEEE
Q 010296 222 HILALAVSSDGRYLASGGLD------------RHIHLWDTRIQEHIQAFPGH-RGPVSCLTFRQGTSELFSG 280 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~d------------g~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 280 (513)
..-.|+|+|.|.++++-..+ ..+.+.+..+++..+.+.++ ...++.++|+|+++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45679999999966654322 24666677778776666554 3568999999999888765
No 374
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=57.01 E-value=51 Score=32.06 Aligned_cols=18 Identities=11% Similarity=0.095 Sum_probs=15.3
Q ss_pred eEEEEEEecCCCEEEEec
Q 010296 424 WVSSVTVCGGSDLAASGA 441 (513)
Q Consensus 424 ~i~~~~~s~~~~~l~~g~ 441 (513)
.++.++|+||++.|+++-
T Consensus 532 EpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 532 EVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEEECTTSSEEEEEE
T ss_pred cccCCEECCCCCEEEEEE
Confidence 389999999999888763
No 375
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=51.36 E-value=1.3e+02 Score=26.53 Aligned_cols=191 Identities=11% Similarity=0.081 Sum_probs=98.8
Q ss_pred CCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 010296 169 EDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWD 248 (513)
Q Consensus 169 ~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd 248 (513)
|+..++++.+.+|.|+--.+..-.....- + .........-...+..+........|+..+..|.++-+.
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~----------~-~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~ 69 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRG----------G-KGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMK 69 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC-------------------------------CCEEEEEEEETTCEEEEEETTSEEEEEE
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccC----------C-CCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEE
Confidence 45567889999999987766543221100 0 000000011223344444444556677777788866654
Q ss_pred C---CC------cceee---eccCcCCCeEEEEEe---cCCCeEEEEeCCCcEEEEeCCCC-------ceeEEeecccCC
Q 010296 249 T---RI------QEHIQ---AFPGHRGPVSCLTFR---QGTSELFSGSFDRTVKIWNAEDR-------AYISTLFGHQSE 306 (513)
Q Consensus 249 ~---~~------~~~~~---~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~ 306 (513)
. .. |.++. .+. ....|.++... .+..+++..+..|.++...+... .....+... ..
T Consensus 70 ~~elp~~~~~a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~ 147 (307)
T 1zi0_A 70 VYQLPEATRGARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DE 147 (307)
T ss_dssp GGGSCCCCSSSCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CC
T ss_pred hhHCcCCCCCCCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CE
Confidence 3 21 22221 122 33456665442 34567999999999999876421 112223333 44
Q ss_pred eEEEEe-eCCCeEEEEeCCCcEEEEecCCCeee---------EEecCCCCeeEEEeecC-CeEEEEeCCCCEEEEec
Q 010296 307 VLTIDC-LRKERVLTVGRDRSMQLWKVPEESRL---------VFRAPASSLECCCFISN-DEFLSGSDDGSIELWSL 372 (513)
Q Consensus 307 v~~~~~-~~~~~~~~~~~d~~i~iwd~~~~~~~---------~~~~~~~~v~~~~~~~~-~~~~~~~~dg~i~iwd~ 372 (513)
+..+.. ..+..++..+..|.+..+....-... ........|..+....+ ..+++.+..|.++-.++
T Consensus 148 lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 148 LIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAV 224 (307)
T ss_dssp EEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECG
T ss_pred EEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEH
Confidence 544443 44567888899999888876432111 11122334555544333 34667777777666654
No 376
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=50.60 E-value=1.7 Score=40.16 Aligned_cols=6 Identities=33% Similarity=0.827 Sum_probs=2.7
Q ss_pred CCCCCC
Q 010296 23 QDPFFA 28 (513)
Q Consensus 23 ~~~~~~ 28 (513)
...||.
T Consensus 309 ~~SFFn 314 (417)
T 2ayu_A 309 IESFFN 314 (417)
T ss_dssp CCCGGG
T ss_pred CCCcee
Confidence 345543
No 377
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=49.21 E-value=1.4e+02 Score=26.35 Aligned_cols=193 Identities=10% Similarity=0.035 Sum_probs=105.0
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCccee---------eeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCCC---C---
Q 010296 230 SDGRYLASGGLDRHIHLWDTRIQEHI---------QAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAED---R--- 294 (513)
Q Consensus 230 ~~~~~l~s~~~dg~i~vwd~~~~~~~---------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---~--- 294 (513)
++..++++.+.+|.|+--.+..-... ..++ -...+..+........++..+..|.++-..... .
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 45678899999999998865432211 1122 223455555555667788888889877765532 1
Q ss_pred ---cee---EEeecccCCeEEEEee----CCCeEEEEeCCCcEEEEecCCCe-------eeEEecCCCCeeEEEee-cCC
Q 010296 295 ---AYI---STLFGHQSEVLTIDCL----RKERVLTVGRDRSMQLWKVPEES-------RLVFRAPASSLECCCFI-SND 356 (513)
Q Consensus 295 ---~~~---~~~~~~~~~v~~~~~~----~~~~~~~~~~d~~i~iwd~~~~~-------~~~~~~~~~~v~~~~~~-~~~ 356 (513)
..+ ..+. ....|.++... ++..++.++..|.++...+..-. ..........+..+... ++.
T Consensus 85 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred CCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 111 1122 22345554433 34578899999999988774321 11111223444444443 344
Q ss_pred eEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCE
Q 010296 357 EFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDL 436 (513)
Q Consensus 357 ~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 436 (513)
.++..+..|.+..+....-..... ... +...+ . ......|..+....++..
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR--~~~----Gv~~i----------~-------------L~~~d~vv~~~~v~~~~~ 214 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNR--GTQ----GVCGM----------K-------------LKEGDLFVKVLSVKENPY 214 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCT--TBC----CEECC----------C-------------CCTTCCEEEEEECTTCSE
T ss_pred EEEEEeCCCcEEEEEHHHccccCC--CCC----CeEeE----------E-------------eCCCCEEEEEEEECCCCe
Confidence 588888888888877644211100 000 00000 0 001122555555555667
Q ss_pred EEEecCCCcEEEEEeCC
Q 010296 437 AASGAGNGSVRLWAIES 453 (513)
Q Consensus 437 l~~g~~dg~v~vwd~~~ 453 (513)
|++.+..|.++...+..
T Consensus 215 l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 215 LLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEETTSEEEEEEGGG
T ss_pred EEEEECCCceEEEEHHH
Confidence 88888899999988854
No 378
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=40.95 E-value=2.1e+02 Score=26.02 Aligned_cols=154 Identities=13% Similarity=0.036 Sum_probs=86.3
Q ss_pred ECCCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEE
Q 010296 167 LSEDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHL 246 (513)
Q Consensus 167 ~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~v 246 (513)
+-|+..++++.+.+|.|+--.+..-..... . ..............+..+........|+..+..|.++-
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r----------~-g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~ 71 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRR----------G-GRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFW 71 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCC----------C-CCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEE
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhcc----------C-CCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEE
Confidence 346788999999999999754432110000 0 00000001123445666666656667777777887766
Q ss_pred EeC---CC------cceeee---ccCcCCCeEEEEEec---CCCeEEEEeCCCcEEEEeCCCCc-------eeEEeeccc
Q 010296 247 WDT---RI------QEHIQA---FPGHRGPVSCLTFRQ---GTSELFSGSFDRTVKIWNAEDRA-------YISTLFGHQ 304 (513)
Q Consensus 247 wd~---~~------~~~~~~---~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~ 304 (513)
+.. .. |..+.. +. ....|.++.... ...+|+.++..|.++...+.... ....+.. .
T Consensus 72 ~~~~eip~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~ 149 (370)
T 3l6v_A 72 LPVHQLPEAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-G 149 (370)
T ss_dssp EEGGGSCBCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-T
T ss_pred EEHHHCcCCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-C
Confidence 543 21 222221 22 334566654432 45689999999999998864321 1222332 3
Q ss_pred CCeEEEEe-eCCCeEEEEeCCCcEEEEecC
Q 010296 305 SEVLTIDC-LRKERVLTVGRDRSMQLWKVP 333 (513)
Q Consensus 305 ~~v~~~~~-~~~~~~~~~~~d~~i~iwd~~ 333 (513)
..+..+.. ..+..++..+..|.+..+...
T Consensus 150 d~lv~v~~~~~~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 150 DALVGVALTDGDRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp CCEEEEEEECSCCEEEEEETTSEEEEEEGG
T ss_pred CEEEEEEEeCCCceEEEEeCCCeEEEEEcc
Confidence 34444443 345578888888888888764
No 379
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=39.77 E-value=3.2e+02 Score=27.87 Aligned_cols=61 Identities=8% Similarity=0.050 Sum_probs=37.3
Q ss_pred cccEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCcceeeeccC-------cCCCeEEEEEecCC-CeEEEEe
Q 010296 220 SKHILALAVSSD-GRYLASGGLDRHIHLWDTRIQEHIQAFPG-------HRGPVSCLTFRQGT-SELFSGS 281 (513)
Q Consensus 220 ~~~v~~~~~s~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~-~~l~~~~ 281 (513)
...|.+|+++|. ...+++++..+.|...+ ..++.-..+.. ....|.+|++.|.. ..++.+.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 357999999995 45667777677676655 23332222222 13469999999843 4454443
No 380
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=39.12 E-value=2.2e+02 Score=25.85 Aligned_cols=148 Identities=11% Similarity=0.062 Sum_probs=78.6
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCcc-----------eeeeccC-cCCCeEEEEEecCCCeEEEEeCCCcEEEEe
Q 010296 223 ILALAVSSDGRYLASGGLDRHIHLWDTRIQE-----------HIQAFPG-HRGPVSCLTFRQGTSELFSGSFDRTVKIWN 290 (513)
Q Consensus 223 v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~-----------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 290 (513)
|..|+.. ..+.+.-..+|.|+.|-....- ....+.. ....+..++++....+.+....+|.|+.|-
T Consensus 55 i~~i~~G--~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG 132 (389)
T 3kci_A 55 PVQLIGG--EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 132 (389)
T ss_dssp EEEEEEE--TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEE
T ss_pred eEEEEeC--CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEe
Confidence 4444433 4455556678889988643211 0111111 223455567777777777788899999996
Q ss_pred CCCCc-----------eeEEeecc-cCCeEEEEeeCCCeEEEEeCCCcEEEEecCCCe---------ee---EEe-cCCC
Q 010296 291 AEDRA-----------YISTLFGH-QSEVLTIDCLRKERVLTVGRDRSMQLWKVPEES---------RL---VFR-APAS 345 (513)
Q Consensus 291 ~~~~~-----------~~~~~~~~-~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~---------~~---~~~-~~~~ 345 (513)
....- ....+... ...|..++.- ....++...+|.|+.|-..... .. ... ....
T Consensus 133 ~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G-~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~ 211 (389)
T 3kci_A 133 EAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG-GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH 211 (389)
T ss_dssp CCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC-SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTS
T ss_pred CCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC-cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCC
Confidence 53210 01111111 1245555543 3455667788999999653211 00 111 1123
Q ss_pred CeeEEEeec-CCeEEEEeCCCCEEEEecC
Q 010296 346 SLECCCFIS-NDEFLSGSDDGSIELWSLL 373 (513)
Q Consensus 346 ~v~~~~~~~-~~~~~~~~~dg~i~iwd~~ 373 (513)
.+..++... ....++-..+|.|..|-..
T Consensus 212 ~v~~ia~G~g~~~t~~l~~~G~v~~wG~n 240 (389)
T 3kci_A 212 RVVDIACGSGDAQTLCLTDDDTVWSWGDG 240 (389)
T ss_dssp CEEEEEECCSSCEEEEEETTTEEEEEECC
T ss_pred eEEEEEEcCCCcEEEEEccCCEEEEEeCC
Confidence 444554433 2345666788988888654
No 381
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=35.58 E-value=3.2e+02 Score=26.54 Aligned_cols=164 Identities=10% Similarity=0.040 Sum_probs=83.2
Q ss_pred CCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCc-----cc-EEEEEEcCCCCEEEEEeC---C
Q 010296 171 DSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQS-----KH-ILALAVSSDGRYLASGGL---D 241 (513)
Q Consensus 171 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-v~~~~~s~~~~~l~s~~~---d 241 (513)
..+++.|+.||.++.++.. +..+..+.|....-.......+......|. .+ +..+.+...-+.++.++. .
T Consensus 85 ~~~VyvGaNDGmLHaF~a~-G~E~wAfiP~~~l~~L~~l~~~~y~~~~h~Y~VDG~p~~~Dv~~~g~wrtvLvggmg~GG 163 (570)
T 3hx6_A 85 APRVYVGANDGMLHGFDTD-GNETFAFIPSAVFEKMHKLTARGYQGGAHQFYVDGSPVVADAFFGGAWHTVLIGSLRAGG 163 (570)
T ss_dssp CCEEEEECSSSCEEECCSS-CCCCEEECCHHHHHHCC-------CCHHHHHHHHCCCEEEEEEETTEEEEEEEEECTTSC
T ss_pred ccEEEEECCCceEEEECCC-CcEEEEECCHHHHHHHHHHhccCccccCcceecCCCCEEEEEEeCCcceEEEEEecCCCC
Confidence 4678899999999999987 666555544433211111111110000121 11 233333222233444442 2
Q ss_pred CcEEEEeCCC---cceeeeccC-------cCCCeEEEEEecCCCeEE-EEe------CCCcEEEEeCCCCceeEEeeccc
Q 010296 242 RHIHLWDTRI---QEHIQAFPG-------HRGPVSCLTFRQGTSELF-SGS------FDRTVKIWNAEDRAYISTLFGHQ 304 (513)
Q Consensus 242 g~i~vwd~~~---~~~~~~~~~-------~~~~v~~~~~~~~~~~l~-~~~------~dg~i~iwd~~~~~~~~~~~~~~ 304 (513)
..++..|+.. .+.+..+.. +.-.-..|.-..+++.++ .++ ....|+|.|+.++..+..+....
T Consensus 164 ~~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~~~~~~Lyv~d~~tG~li~~i~~~~ 243 (570)
T 3hx6_A 164 KGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIIDMETGAITRKLEVTG 243 (570)
T ss_dssp SEEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSCTTCCEEEEEEETTTCCEEEEEEECC
T ss_pred cEEEEEECCCCCCCceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCCCCCccEEEEEECCCCceEEEEecCC
Confidence 3466666654 223333321 111111233334566544 222 13579999999999988775321
Q ss_pred -----CCeEEEEee---CCC---eEEEEeCCCcEEEEecCCC
Q 010296 305 -----SEVLTIDCL---RKE---RVLTVGRDRSMQLWKVPEE 335 (513)
Q Consensus 305 -----~~v~~~~~~---~~~---~~~~~~~d~~i~iwd~~~~ 335 (513)
..+..+... .++ .+.++...|.|.-+|+...
T Consensus 244 ~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~GnlWRfDl~~~ 285 (570)
T 3hx6_A 244 RTGVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDLIAG 285 (570)
T ss_dssp STTSCCCEEEEEEECTTSSSBCCEEEEEETTSEEEEEECSCS
T ss_pred CCccCCccccceEEecCCCCceeEEEEEeCCCcEEEEEcCCC
Confidence 123333322 233 5678889999999998654
No 382
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=34.07 E-value=2.5e+02 Score=24.88 Aligned_cols=187 Identities=12% Similarity=0.068 Sum_probs=99.7
Q ss_pred CCCCeEEEEeCCceEEEEeCCCCccccccCCChhhhccCCCCCCCCCCCCCcccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 010296 169 EDDSKGFSASKDGSILHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRHIHLWD 248 (513)
Q Consensus 169 ~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vwd 248 (513)
|+..++++.+.+|.|+--.+..-.... .. ...+ .-...+..+........|+..+..|.++-+.
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~-------------~~--~~~l-ke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~ 66 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASN-------------GQ--DFAM-KDTDRLLAMLEMNTKDVLLLFTNKGNYLYCP 66 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTT-------------TC--CCCC-CTTCCEEEEEEEETTSEEEEEETTSEEEEEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcC-------------cc--cccc-CCCCEEEEEEEECCCCEEEEEECCCEEEEEE
Confidence 566788899999999876543111000 00 0011 1233455555555566777777788876655
Q ss_pred C---C------Ccceeeec-cC-cCCCeEEEEEecC---CCeEEEEeCCCcEEEEeCCCC--------ceeEEeecccCC
Q 010296 249 T---R------IQEHIQAF-PG-HRGPVSCLTFRQG---TSELFSGSFDRTVKIWNAEDR--------AYISTLFGHQSE 306 (513)
Q Consensus 249 ~---~------~~~~~~~~-~~-~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~ 306 (513)
. . .|.++..+ .- ....|.++...++ +.+|+.++..|.++...+... .....+.. ...
T Consensus 67 ~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~ 145 (323)
T 1wp5_A 67 VHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQ 145 (323)
T ss_dssp GGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCC
T ss_pred HHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCE
Confidence 3 2 12222211 11 2345665544332 567999999999999887421 11122332 244
Q ss_pred eEEEEe-eCCCeEEEEeCCCcEEEEecCCCeee---------EEecCCCCeeEEEeec-CC-eEEEEeCCCCEEEEec
Q 010296 307 VLTIDC-LRKERVLTVGRDRSMQLWKVPEESRL---------VFRAPASSLECCCFIS-ND-EFLSGSDDGSIELWSL 372 (513)
Q Consensus 307 v~~~~~-~~~~~~~~~~~d~~i~iwd~~~~~~~---------~~~~~~~~v~~~~~~~-~~-~~~~~~~dg~i~iwd~ 372 (513)
+..+.. ..+..++..+..|.+..+....-... ........|..+...+ +. .+++.+..|..+..++
T Consensus 146 lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~ 223 (323)
T 1wp5_A 146 VVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKL 223 (323)
T ss_dssp EEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEH
Confidence 544444 34567888999999888876432111 1112233444443332 33 4666666666655544
No 383
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=30.44 E-value=77 Score=31.63 Aligned_cols=67 Identities=15% Similarity=0.169 Sum_probs=42.3
Q ss_pred EEEEEEe----cCC---CEEEEecCCCcEEEE-EeCCCCcceeeeeecCcccEEEEEEeecCC--CEEEEEecCCCcc
Q 010296 425 VSSVTVC----GGS---DLAASGAGNGSVRLW-AIESETKDIQPLYNLPLVGFVNSLAFAKSG--QFLIAGVGQEPRL 492 (513)
Q Consensus 425 i~~~~~s----~~~---~~l~~g~~dg~v~vw-d~~~~~~~~~~~~~~~~~~~v~~v~~sp~~--~~l~~~~~~dg~v 492 (513)
.++|+.. .++ ..++.|+.+|.|.=. ........+..+..++...+|..|.++++. .+|+++ +..+.+
T Consensus 399 ~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~-s~~~V~ 475 (663)
T 1olz_A 399 YTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAG-SNSGVV 475 (663)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEE-CSSCEE
T ss_pred eEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEE-EcCeEE
Confidence 5666653 333 378889999987433 443332233333344456789999999988 888888 555433
No 384
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=30.21 E-value=2.8e+02 Score=24.29 Aligned_cols=192 Identities=11% Similarity=0.046 Sum_probs=99.6
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCccee---------eeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeC---CC----
Q 010296 230 SDGRYLASGGLDRHIHLWDTRIQEHI---------QAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNA---ED---- 293 (513)
Q Consensus 230 ~~~~~l~s~~~dg~i~vwd~~~~~~~---------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~---~~---- 293 (513)
|+..++++.+.+|.|+--.+..-+.. ..++ ....+..+........|+..+..|.++-+.. ..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~k-e~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIK-EEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 34567888999999987766542211 1122 2234444555555667777888887665543 22
Q ss_pred --CceeEEe-e-cccCCeEEEEee----CCCeEEEEeCCCcEEEEecCCCe------ee--EEecCCCCeeEEEe-ecCC
Q 010296 294 --RAYISTL-F-GHQSEVLTIDCL----RKERVLTVGRDRSMQLWKVPEES------RL--VFRAPASSLECCCF-ISND 356 (513)
Q Consensus 294 --~~~~~~~-~-~~~~~v~~~~~~----~~~~~~~~~~d~~i~iwd~~~~~------~~--~~~~~~~~v~~~~~-~~~~ 356 (513)
|..+..+ . .....|.++... ++..++.++..|.++...+..-. .. .+... ..+..+.. ..+.
T Consensus 80 a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 80 ARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGED 158 (307)
T ss_dssp SCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTC
T ss_pred CCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCC
Confidence 2221111 1 123356555432 34468899999999998764211 11 12222 34444333 3344
Q ss_pred eEEEEeCCCCEEEEecCCCCeeEEeecCCCcccCCCCcccCcCccccccCCCCCCCCCCcCCCCCcceEEEEEEecCCCE
Q 010296 357 EFLSGSDDGSIELWSLLRKKPVYIVKNAHPLLDGLKNFEQDEGKISNGHSENGNLNPGSYHSSSAYSWVSSVTVCGGSDL 436 (513)
Q Consensus 357 ~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 436 (513)
.++..+..|.+..+....-..... .... ...+ . ......|.++...+++..
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr--~a~G----v~~i----------~-------------L~~~d~Vv~~~~~~~~~~ 209 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGC--NTTG----VRGI----------R-------------LGEGDKVVSLIVPRGDGA 209 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCT--TCCC----EECC----------C-------------CCTTCCEEEEECCCSSCE
T ss_pred EEEEECCCCcEEEEEHHHcCccCC--CCCC----eEeE----------E-------------eCCCCEEEEEEEecCCCE
Confidence 577888888877776543211100 0000 0000 0 011122555554455567
Q ss_pred EEEecCCCcEEEEEeC
Q 010296 437 AASGAGNGSVRLWAIE 452 (513)
Q Consensus 437 l~~g~~dg~v~vwd~~ 452 (513)
|++.+..|.++-.++.
T Consensus 210 ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 210 ILTATQNGYGKRTAVA 225 (307)
T ss_dssp EEEEETTSEEEEECGG
T ss_pred EEEEEcCCceEEEEHH
Confidence 8888999999988874
No 385
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=29.93 E-value=2.9e+02 Score=24.42 Aligned_cols=152 Identities=10% Similarity=0.115 Sum_probs=83.8
Q ss_pred ccEEEE-EEcC--CCCEEEEEeCCCcEEEEeCCC--------cceeeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEE
Q 010296 221 KHILAL-AVSS--DGRYLASGGLDRHIHLWDTRI--------QEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIW 289 (513)
Q Consensus 221 ~~v~~~-~~s~--~~~~l~s~~~dg~i~vwd~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 289 (513)
..|.++ .... ++.+|+..+..|.++...+.. +.....+... ..+..+........|+..+.+|.+..+
T Consensus 92 e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf 170 (323)
T 1wp5_A 92 EEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWF 170 (323)
T ss_dssp CCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEE
T ss_pred CEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEE
Confidence 345554 3332 256889999999999987642 2222233322 555555555556678888899998888
Q ss_pred eCCCCc-------eeEEee-cccCCeEEEEeeC-CC-eEEEEeCCCcEEEEecCCCe--------eeEEe---cCCCCee
Q 010296 290 NAEDRA-------YISTLF-GHQSEVLTIDCLR-KE-RVLTVGRDRSMQLWKVPEES--------RLVFR---APASSLE 348 (513)
Q Consensus 290 d~~~~~-------~~~~~~-~~~~~v~~~~~~~-~~-~~~~~~~d~~i~iwd~~~~~--------~~~~~---~~~~~v~ 348 (513)
....-. -+..+. .....|.++...+ +. .+++.+..|..+..++..-. ..... .....+.
T Consensus 171 ~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~ 250 (323)
T 1wp5_A 171 DESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRIS 250 (323)
T ss_dssp EGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEE
T ss_pred EHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEE
Confidence 764211 111111 1234566665444 34 68888888888877764311 11111 1122343
Q ss_pred EE-EeecCCeEEEEeCCCCEEEEecC
Q 010296 349 CC-CFISNDEFLSGSDDGSIELWSLL 373 (513)
Q Consensus 349 ~~-~~~~~~~~~~~~~dg~i~iwd~~ 373 (513)
.+ .+.++..++..+..|.+..+.+.
T Consensus 251 ~~~~v~~~~~i~~it~~g~~ir~~~~ 276 (323)
T 1wp5_A 251 GFVVAQDSDTIYLQTEKSFIETIKVG 276 (323)
T ss_dssp EEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred EEEEeCCCCeEEEEeCCCeEEEEEhh
Confidence 22 33334456666677766555543
No 386
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=27.64 E-value=1.1e+02 Score=29.32 Aligned_cols=69 Identities=14% Similarity=0.083 Sum_probs=41.9
Q ss_pred eEEEEEEecC----C--CEEEEecCCCcEEEEEeC-CCC------cceeeeeecCcccEEEEEEeecCCCEEEEEecCCC
Q 010296 424 WVSSVTVCGG----S--DLAASGAGNGSVRLWAIE-SET------KDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEP 490 (513)
Q Consensus 424 ~i~~~~~s~~----~--~~l~~g~~dg~v~vwd~~-~~~------~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg 490 (513)
..++|+...- + ..++.|+.+|.|.=.-+. ... ..+..+...+...+|..+.++++..+|.++ +..+
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~-s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIG-STAG 483 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEE-BSSC
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEE-ECCe
Confidence 3677666532 3 467789999987544332 211 122222332345789999999999999999 5555
Q ss_pred ccc
Q 010296 491 RLG 493 (513)
Q Consensus 491 ~v~ 493 (513)
.++
T Consensus 484 V~~ 486 (495)
T 1q47_A 484 VAQ 486 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 387
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=27.29 E-value=2.9e+02 Score=23.46 Aligned_cols=139 Identities=6% Similarity=-0.044 Sum_probs=75.9
Q ss_pred EEEEEeCCCcEEEEeCCCcce-eeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeCC---C----CceeE---Eeec
Q 010296 234 YLASGGLDRHIHLWDTRIQEH-IQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAE---D----RAYIS---TLFG 302 (513)
Q Consensus 234 ~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~----~~~~~---~~~~ 302 (513)
.+++.+.+|.|+--....-.. ...++.. ..+..+........|+..+..|.++-+... . |..+. .+.
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~-D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~- 81 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAG-DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP- 81 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTT-CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC-
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCC-CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC-
Confidence 456677788887665432111 1123323 344444444455567777888886665432 1 22111 121
Q ss_pred ccCCeEEEEe-eCCCeEEEEeCCCcEEEEecCCC-------eeeEEecCCCCeeEEEee--cCCeEEEEeCCCCEEEEec
Q 010296 303 HQSEVLTIDC-LRKERVLTVGRDRSMQLWKVPEE-------SRLVFRAPASSLECCCFI--SNDEFLSGSDDGSIELWSL 372 (513)
Q Consensus 303 ~~~~v~~~~~-~~~~~~~~~~~d~~i~iwd~~~~-------~~~~~~~~~~~v~~~~~~--~~~~~~~~~~dg~i~iwd~ 372 (513)
....|.++.. .++..++.++..|.++...+..- ...........+..+... .+..++..+.+|.+..+..
T Consensus 82 ~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~ 161 (256)
T 1zvt_A 82 PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPV 161 (256)
T ss_dssp TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEEG
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEEEEH
Confidence 2345666644 33456889999999999877431 111111122344443333 3446888888888888876
Q ss_pred CC
Q 010296 373 LR 374 (513)
Q Consensus 373 ~~ 374 (513)
..
T Consensus 162 ~e 163 (256)
T 1zvt_A 162 SD 163 (256)
T ss_dssp GG
T ss_pred HH
Confidence 54
No 388
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=26.37 E-value=3.8e+02 Score=24.57 Aligned_cols=105 Identities=10% Similarity=0.042 Sum_probs=57.4
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-ce------------eeeccCcCCCeEEEEEecCCCeEEEEeCCCcEEE
Q 010296 222 HILALAVSSDGRYLASGGLDRHIHLWDTRIQ-EH------------IQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKI 288 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~-~~------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 288 (513)
.|..|+.. +.+.+.-..+|.|+.|-.... ++ ...+. ....|..|+. ...+.+....+|.|+.
T Consensus 76 ~v~~va~G--~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-~~~~i~~va~--G~~hs~al~~~G~v~~ 150 (423)
T 3mvd_K 76 DAVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALCISA--GDSHSACLLEDGRVFA 150 (423)
T ss_dssp SEEEEEEC--SSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECC-CSSCEEEEEE--CSSEEEEEETTSCEEE
T ss_pred CceEEeeC--CCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEc-CCCCEEEEEc--CcCeEEEEeCCCeEEE
Confidence 36555554 456666677899999964321 10 00111 1234555554 3345666678999999
Q ss_pred EeC--CC-Cce---------eEEeecccCCeEEEEeeCCCeEEEEeCCCcEEEEec
Q 010296 289 WNA--ED-RAY---------ISTLFGHQSEVLTIDCLRKERVLTVGRDRSMQLWKV 332 (513)
Q Consensus 289 wd~--~~-~~~---------~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~ 332 (513)
|-. .. +++ ..........|..|+.- ....++...+|.|+.|-.
T Consensus 151 wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G-~~hs~alt~~G~v~~wG~ 205 (423)
T 3mvd_K 151 WGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASG-ADHLVILTTAGKVFTVGC 205 (423)
T ss_dssp EECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEEC-SSEEEEEETTSCEEEEEC
T ss_pred EeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecC-CCeEEEEecCCeEEEeeC
Confidence 975 22 221 11111123345666543 345566678899999964
No 389
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=26.17 E-value=3.7e+02 Score=24.36 Aligned_cols=149 Identities=12% Similarity=0.127 Sum_probs=79.9
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCcc-----------eeeeccC-cCCCeEEEEEecCCCeEEEEeCCCcEEEE
Q 010296 222 HILALAVSSDGRYLASGGLDRHIHLWDTRIQE-----------HIQAFPG-HRGPVSCLTFRQGTSELFSGSFDRTVKIW 289 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~dg~i~vwd~~~~~-----------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 289 (513)
.+..++.+.-..+.+.-..+|.|+.|-....- ....+.. ....|..++. ...+.++...+|.|+.|
T Consensus 106 ~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~--G~~hs~alt~~G~v~~w 183 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA--GGAHSACVTAAGDLYTW 183 (389)
T ss_dssp CEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTSCEEEE
T ss_pred ceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEe--CcCeEEEEeCCCeEEEe
Confidence 35556777666777777889999999643211 0111111 1124555544 34556666789999999
Q ss_pred eCCCC-c----------eeEEeec-ccCCeEEEEeeC-CCeEEEEeCCCcEEEEecCCCee----------e--EEec-C
Q 010296 290 NAEDR-A----------YISTLFG-HQSEVLTIDCLR-KERVLTVGRDRSMQLWKVPEESR----------L--VFRA-P 343 (513)
Q Consensus 290 d~~~~-~----------~~~~~~~-~~~~v~~~~~~~-~~~~~~~~~d~~i~iwd~~~~~~----------~--~~~~-~ 343 (513)
-.... + ....+.. ....|..++... +...++...++.|+.|-...... . .... .
T Consensus 184 G~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~ 263 (389)
T 3kci_A 184 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT 263 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGT
T ss_pred CCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccC
Confidence 65421 1 0111111 223566666644 34566778899999996432111 1 1111 1
Q ss_pred CCCeeEEEeecCCeEEEEeCCCCEEEEecC
Q 010296 344 ASSLECCCFISNDEFLSGSDDGSIELWSLL 373 (513)
Q Consensus 344 ~~~v~~~~~~~~~~~~~~~~dg~i~iwd~~ 373 (513)
...|..++.-.. ..++-..+|.|+.|=..
T Consensus 264 ~~~v~~v~~G~~-hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 264 GLGVVKVECGSQ-FSVALTKSGAVYTWGKG 292 (389)
T ss_dssp TSCEEEEEEETT-EEEEEETTSCEEEEECC
T ss_pred CCcEEEEeCCCC-EEEEEeCCCeEEEEeCC
Confidence 123444444332 34455688999999754
No 390
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=25.23 E-value=1.9e+02 Score=20.66 Aligned_cols=23 Identities=9% Similarity=0.245 Sum_probs=11.7
Q ss_pred EEEeeCCCeEEEEeCCCcEEEEe
Q 010296 309 TIDCLRKERVLTVGRDRSMQLWK 331 (513)
Q Consensus 309 ~~~~~~~~~~~~~~~d~~i~iwd 331 (513)
.+.+..+|.|+.-..++.+.+|.
T Consensus 53 ~l~l~~dGNLVl~~~~~~~~vW~ 75 (111)
T 3mez_A 53 TLRLNNRGQLEIHSANSNTPVWV 75 (111)
T ss_dssp EEEECTTSCEEEECSSCSSCSEE
T ss_pred EEEEcCCCcEEEEeCCCCEEEEE
Confidence 34455566666554444434553
No 391
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=24.79 E-value=1.9e+02 Score=20.65 Aligned_cols=24 Identities=0% Similarity=-0.122 Sum_probs=13.3
Q ss_pred EEEeeCCCeEEEEeCCCcEEEEecC
Q 010296 309 TIDCLRKERVLTVGRDRSMQLWKVP 333 (513)
Q Consensus 309 ~~~~~~~~~~~~~~~d~~i~iwd~~ 333 (513)
.+.+..+|.|+.-..++.+ +|...
T Consensus 60 ~l~l~~dGNLVl~d~~~~~-iW~S~ 83 (113)
T 3mez_B 60 FMRLGHSGELDITDDRLNT-VFVSN 83 (113)
T ss_dssp EEEECTTSCEEEECTTSCE-EEECS
T ss_pred EEEEeCCCcEEEECCCCCE-EEECC
Confidence 4555666666655544443 56543
No 392
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=23.56 E-value=95 Score=30.07 Aligned_cols=67 Identities=10% Similarity=0.095 Sum_probs=42.0
Q ss_pred eEEEEEEecCC--CEEEEecCCCcEEEEEeCCCCc---ceeeeeecCcccEEE-EEEeecCCCEEEEEecCCCc
Q 010296 424 WVSSVTVCGGS--DLAASGAGNGSVRLWAIESETK---DIQPLYNLPLVGFVN-SLAFAKSGQFLIAGVGQEPR 491 (513)
Q Consensus 424 ~i~~~~~s~~~--~~l~~g~~dg~v~vwd~~~~~~---~~~~~~~~~~~~~v~-~v~~sp~~~~l~~~~~~dg~ 491 (513)
.+++|+....+ ..++.|+.+|.|.-..+..... .+..+...+...+|. .+.+++++.+|+++ +..+.
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~-s~~~V 473 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVM-SERQV 473 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEE-CSSEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEE-ecccc
Confidence 36666665533 4678899999876665643311 122222223356785 89999999999998 55543
No 393
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=23.39 E-value=1.4e+02 Score=22.85 Aligned_cols=7 Identities=0% Similarity=-0.439 Sum_probs=3.5
Q ss_pred CCCCCCC
Q 010296 22 NQDPFFA 28 (513)
Q Consensus 22 ~~~~~~~ 28 (513)
..|+.+.
T Consensus 83 ~~W~rL~ 89 (150)
T 2kmw_A 83 SWWTRLL 89 (150)
T ss_dssp SCCSCSB
T ss_pred CcCcccc
Confidence 3566443
No 394
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=22.83 E-value=1.5e+02 Score=29.63 Aligned_cols=67 Identities=15% Similarity=0.177 Sum_probs=41.1
Q ss_pred EEEEEEe----cCC--CEEEEecCCCcEE-EEEeCCCC------cceeeeeecCcccEEEEEEeecCCCEEEEEecCCCc
Q 010296 425 VSSVTVC----GGS--DLAASGAGNGSVR-LWAIESET------KDIQPLYNLPLVGFVNSLAFAKSGQFLIAGVGQEPR 491 (513)
Q Consensus 425 i~~~~~s----~~~--~~l~~g~~dg~v~-vwd~~~~~------~~~~~~~~~~~~~~v~~v~~sp~~~~l~~~~~~dg~ 491 (513)
.+.|+.. +++ ..++.|+.+|.|. +.-..... ..+..+..++...+|..+.++++..+|+++ +..+.
T Consensus 414 lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~-t~~~V 492 (667)
T 4gz8_A 414 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIG-STAGV 492 (667)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEE-BSSCE
T ss_pred eeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEE-ECCEE
Confidence 4555553 334 3677899999874 44332221 122223334457789999999999999998 55554
Q ss_pred c
Q 010296 492 L 492 (513)
Q Consensus 492 v 492 (513)
+
T Consensus 493 ~ 493 (667)
T 4gz8_A 493 A 493 (667)
T ss_dssp E
T ss_pred E
Confidence 3
No 395
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=22.65 E-value=3.5e+02 Score=22.88 Aligned_cols=111 Identities=13% Similarity=0.104 Sum_probs=64.1
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCC---C----cceee---eccCcCCCeEEEEEecCCCeEEEEeCCCcEEEEeC
Q 010296 222 HILALAVSSDGRYLASGGLDRHIHLWDTR---I----QEHIQ---AFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNA 291 (513)
Q Consensus 222 ~v~~~~~s~~~~~l~s~~~dg~i~vwd~~---~----~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 291 (513)
.+..+........|+..+..|.++-+... . |..+. .+. ....|.++....++.+|+.++..|.++...+
T Consensus 34 ~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~-~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~ 112 (256)
T 1zvt_A 34 SFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP-PGATVDHMLMESDDQKLLMASDAGYGFVCTF 112 (256)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC-TTCCEEEEECCCTTCEEEEEBTTSEEEEEEG
T ss_pred EEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEH
Confidence 34444444445556667778887665432 1 22211 122 2346666644345677889999999999887
Q ss_pred CC-------CceeEEeecccCCeEEEEee--CCCeEEEEeCCCcEEEEecCC
Q 010296 292 ED-------RAYISTLFGHQSEVLTIDCL--RKERVLTVGRDRSMQLWKVPE 334 (513)
Q Consensus 292 ~~-------~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~d~~i~iwd~~~ 334 (513)
.. +..+..+.. ...+..+... .+..++..+..|.+..+.+..
T Consensus 113 ~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~e 163 (256)
T 1zvt_A 113 NDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFPVSD 163 (256)
T ss_dssp GGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEEGGG
T ss_pred HHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEEHHH
Confidence 43 222333332 2344444333 455788888889888887753
No 396
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=21.83 E-value=2.1e+02 Score=20.09 Aligned_cols=22 Identities=9% Similarity=0.191 Sum_probs=10.6
Q ss_pred EEEeeCCCeEEEEeCCCcEEEEe
Q 010296 309 TIDCLRKERVLTVGRDRSMQLWK 331 (513)
Q Consensus 309 ~~~~~~~~~~~~~~~d~~i~iwd 331 (513)
.+.+..+|.|+.-..++. .+|.
T Consensus 54 ~L~l~~dGnLvL~d~~~~-~vWs 75 (105)
T 4h3o_A 54 SAVLQSDGNFVVYDSSGR-SLWA 75 (105)
T ss_dssp EEEECTTSCEEEECTTCC-EEEE
T ss_pred EEEEeCCccEEEECCCcE-EEEE
Confidence 345555665554444443 2454
Done!