Query 010304
Match_columns 513
No_of_seqs 265 out of 1453
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 03:53:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010304.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010304hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h12_A Citrate synthase; acido 100.0 3E-128 1E-132 1022.8 43.2 424 50-486 7-436 (436)
2 3l96_A Citrate synthase; quate 100.0 2E-126 6E-131 1005.7 35.6 418 53-486 4-426 (426)
3 3msu_A Citrate synthase; helix 100.0 6E-125 2E-129 993.5 40.5 409 54-480 13-427 (427)
4 3tqg_A 2-methylcitrate synthas 100.0 7E-115 3E-119 905.4 35.5 372 92-486 2-374 (375)
5 1o7x_A Citrate synthase; lyase 100.0 4E-114 1E-118 901.9 36.7 375 94-486 1-377 (377)
6 1vgm_A 378AA long hypothetical 100.0 9E-114 3E-118 899.7 37.1 374 95-486 3-378 (378)
7 3o8j_A 2-methylcitrate synthas 100.0 3E-113 1E-117 899.3 38.8 372 96-487 32-404 (404)
8 1iom_A Citrate synthase; open 100.0 4E-112 1E-116 886.8 41.2 375 96-487 2-377 (377)
9 2ibp_A Citrate synthase; disul 100.0 2E-112 5E-117 897.3 37.5 380 97-486 22-409 (409)
10 3hwk_A Methylcitrate synthase; 100.0 4E-112 1E-116 892.7 40.2 398 48-481 14-411 (414)
11 1vgp_A 373AA long hypothetical 100.0 7E-112 2E-116 884.6 39.8 370 96-486 2-373 (373)
12 2ifc_A Citrate synthase; oxalo 100.0 4E-112 1E-116 889.3 37.8 375 96-487 6-385 (385)
13 2p2w_A Citrate synthase; trans 100.0 8E-112 3E-116 881.8 38.4 363 98-488 3-365 (367)
14 1aj8_A Citrate synthase; hyper 100.0 1E-110 5E-115 873.5 40.3 369 99-487 3-371 (371)
15 2c6x_A Citrate synthase 1; tri 100.0 6E-110 2E-114 866.1 37.2 359 99-480 3-363 (363)
16 1a59_A Citrate synthase; cold- 100.0 1E-108 4E-113 861.9 41.0 365 97-481 5-378 (378)
17 1csh_A Citrate synthase; lyase 100.0 9E-105 3E-109 843.8 33.7 385 80-476 17-428 (435)
18 3u5c_P 40S ribosomal protein S 48.4 6.9 0.00024 35.1 1.7 24 120-144 14-37 (142)
19 2xzm_S RPS15E; ribosome, trans 47.3 5.8 0.0002 35.7 1.0 25 120-144 10-42 (144)
20 3j20_T 30S ribosomal protein S 43.1 6.9 0.00023 34.8 0.9 24 120-144 5-28 (132)
21 2ifc_A Citrate synthase; oxalo 38.8 64 0.0022 33.3 7.5 63 133-197 153-219 (385)
22 1a59_A Citrate synthase; cold- 36.1 68 0.0023 33.0 7.2 63 133-197 151-217 (378)
23 1vgm_A 378AA long hypothetical 34.8 83 0.0028 32.4 7.6 63 133-197 149-215 (378)
24 3iz6_R 40S ribosomal protein S 34.3 8.4 0.00029 35.0 0.0 24 120-144 23-46 (154)
25 1vgp_A 373AA long hypothetical 31.5 81 0.0028 32.4 6.8 63 133-197 145-211 (373)
26 2ibp_A Citrate synthase; disul 31.0 1.1E+02 0.0036 31.9 7.7 63 133-197 179-245 (409)
27 1aj8_A Citrate synthase; hyper 28.6 2E+02 0.0069 29.4 9.2 62 134-197 149-214 (371)
28 1iom_A Citrate synthase; open 28.4 2E+02 0.0069 29.5 9.2 63 133-197 149-215 (377)
29 1o7x_A Citrate synthase; lyase 24.0 1.3E+02 0.0044 30.9 6.7 71 125-197 140-214 (377)
30 3tqg_A 2-methylcitrate synthas 20.7 2.1E+02 0.0072 29.3 7.6 61 135-197 153-217 (375)
31 2c6x_A Citrate synthase 1; tri 20.7 1.1E+02 0.0038 31.3 5.4 63 133-198 142-209 (363)
32 3rjt_A Lipolytic protein G-D-S 20.4 1.4E+02 0.0049 25.9 5.6 87 345-432 118-214 (216)
No 1
>2h12_A Citrate synthase; acidophIle, acetic acid resistance, allostery, transferase; HET: CMX; 1.85A {Acetobacter aceti}
Probab=100.00 E-value=3.3e-128 Score=1022.79 Aligned_cols=424 Identities=47% Similarity=0.822 Sum_probs=396.9
Q ss_pred CCCCccEEEEeccCCeEEEeeeeeCCC--cchhhhhhhhcCCCCcceeeecCCCcccceeeeeeeeEeCCCCeeEEcccC
Q 010304 50 GNLKGSLTVVDERTGKRYQIPVSQEGT--VKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYP 127 (513)
Q Consensus 50 ~~~~~~l~~~~~r~g~~~~~pi~~~~~--~~a~di~~l~~~~~~~g~~~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~ 127 (513)
.+++.++|+ +++||+|||||.. || ..++||++|++ ++|+++|||||.||++|+|+||+|||++|+|+|||||
T Consensus 7 ~~~~~~~~~--~~~~~~~~~pi~~-~~~~~~~~d~~~l~~---~~g~~t~~~Gl~g~~~~~S~Is~idg~~G~L~YRGy~ 80 (436)
T 2h12_A 7 EGKLSTATI--SVDGKSAEMPVLS-GTLGPDVIDIRKLPA---QLGVFTFDPGYGETAACNSKITFIDGDKGVLLHRGYP 80 (436)
T ss_dssp ----CEEEE--EETTEEEEEEEEC-CSBSCCEEECTTHHH---HHSCEEECTTCTTEEEEEESSEEEETTTTEEEETTEE
T ss_pred cCCCCeEEE--EECCcEEEEeeec-CCCCCceeeehhhcc---cCCcEeeCCccCCCeeeeeeceEEeCCCCEEEECCeE
Confidence 355667777 6889999999999 77 56799999975 6899999999999999999999999999999999999
Q ss_pred HHHHhhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHHHHHHHHhCCCCCChhhHHHHHHHHhhccCCCCCCcc
Q 010304 128 IEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDIIQAMPHDAHPMGVLVSAMSALSIFHPDANPAL 207 (513)
Q Consensus 128 i~eLa~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~~~i~~~p~~~hPm~~l~a~v~al~~~~~~~~pa~ 207 (513)
|+|||++++||||+||||+|+|||++|++.|+..|..++.+|+.+.++++.||+++|||++|++++++|++|+++...
T Consensus 81 I~dLa~~~~feEvayLLl~G~LPt~~el~~f~~~l~~~~~lp~~v~~~~~~~p~~~hPM~~l~~~v~aL~~~~~~~~~-- 158 (436)
T 2h12_A 81 IAQLAENASYEEVIYLLLNGELPNKAQYDTFTNTLTNHTLLHEQIRNFFNGFRRDAHPMAILCGTVGALSAFYPDAND-- 158 (436)
T ss_dssp HHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCSCCGGGHHHHTTSCTTCCHHHHHHHHHHHHGGGCC------
T ss_pred HHHHHhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHHhccCCCHHHHHHHHhCCCCCCHHHHHHHHHHHHhhcCccccc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999876521
Q ss_pred cCCCcccchhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHH
Q 010304 208 KGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYSENFLYMLDSLGNRAYKPNPRLARVLDVLFIL 287 (513)
Q Consensus 208 ~g~~~~~~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p~~~lsy~eNfL~ml~~~~~~~~~p~p~~~~~Ld~~LIL 287 (513)
. .+.+...++++|||||+|+|+|++|+++.|+++++|+++++|++|||+||++.+...|+|+|..+++||++|||
T Consensus 159 ----~-~~~~~~~~~a~rLiAk~ptiaa~~yr~~~g~~~~~p~~~ls~a~nfl~ml~g~~~~~~~~~~~~~~~ld~~LiL 233 (436)
T 2h12_A 159 ----I-AIPANRDLAAMRLIAKIPTIAAWAYKYTQGEAFIYPRNDLNYAENFLSMMFARMSEPYKVNPVLARAMNRILIL 233 (436)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTSCHHHHHHHHHHCBTTBCCCCCHHHHHHHHHHHHH
T ss_pred ----C-CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHhcCCCCccCCCCHHHHHHHHhhhee
Confidence 1 12234567899999999999999999999999999999999999999999998888899999999999999999
Q ss_pred hcCCCCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChHHHHHHHHHHhCCCCCHHHHHHHHHhcC--CcccccCC
Q 010304 288 HAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRK--RKMSGFGH 365 (513)
Q Consensus 288 hADHelN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAneav~~mL~eI~~~~~i~~~i~~~~~~~--~rl~GFGH 365 (513)
|||||+||||||+|++|||++|+|+||+|||+|||||+||||||+|++||++|++++++++||+++++++ ++||||||
T Consensus 234 hADHe~NaSTftaRvvaSt~ad~ysaiaAgi~aL~GPlHGGAne~v~~ml~ei~~~~~v~~~i~~~l~~~~g~~imGFGH 313 (436)
T 2h12_A 234 HADHEQNASTSTVRLAGSTGANPFACIAAGIAALWGPAHGGANEAVLKMLARIGKKENIPAFIAQVKDKNSGVKLMGFGH 313 (436)
T ss_dssp HSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHHCSGGGHHHHHHHHHCTTSCCCCTTBCC
T ss_pred ecCCCCchHHHHHHHHHhcCccHHHHHHHHHHhcCCCccCCHHHHHHHHHHHhcCchHHHHHHHHHHhccCCCcccCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999965 89999999
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHhccccccccCCCCchhhHHHHHHHHcCCCCCchhhHhh
Q 010304 366 RVYKNYDPRAKVIRKLAEEVFSIVG--RDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFA 443 (513)
Q Consensus 366 rVYk~~DPRA~iL~~~a~~l~~~~~--~~~ll~iA~~lE~~a~~d~yf~~r~LyPNVDfysg~i~~alGiP~~~~t~lFa 443 (513)
||||++||||++||++|++++++.| .+|++++|.+||+++++|+||+.||+|||||||||+||++||||.+|||+||+
T Consensus 314 rVYk~~DPRa~iLk~~a~~l~~~~g~~~~~~~~la~~lE~~al~~~~~~~k~l~pNVDfysg~i~~~lGiP~~~ft~lFa 393 (436)
T 2h12_A 314 RVYKNFDPRAKIMQQTCHEVLTELGIKDDPLLDLAVELEKIALSDDYFVQRKLYPNVDFYSGIILKAMGIPTSMFTVLFA 393 (436)
T ss_dssp SSCSSCCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHSHHHHHTTCCBCTHHHHHHHHHHTTCCGGGHHHHHH
T ss_pred cccCCCCCcHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccCCCcChHHHHHHHHHHhCCChhhhhhhhh
Confidence 9999999999999999999998888 68999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHhhhcCCCCCccCCcccccCCCCccccccccc
Q 010304 444 IPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKER 486 (513)
Q Consensus 444 i~R~~GwiAH~~Eq~~~~~~ki~RPr~~Y~G~~~r~~~p~~~R 486 (513)
++|++||+|||+||+.+|..||+||||+|+|+..|+|+|+++|
T Consensus 394 isR~~GW~AH~~Eq~~~~~~kI~RPr~~Y~G~~~r~~~p~~~R 436 (436)
T 2h12_A 394 VARTTGWVSQWKEMIEEPGQRISRPRQLYIGAPQRDYVPLAKR 436 (436)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCCCCCEEEECSCCCCCCCCGGGC
T ss_pred hhccccHHHHHHHHHhCCCCceecccccccCCCCCCCCCcccC
Confidence 9999999999999999866799999999999999999999988
No 2
>3l96_A Citrate synthase; quaternary, hexamer, GRAM-negative bacteri allostery, oxaloacetate, acetylcoa, NADH, allosteric enzyme transferase; 1.90A {Escherichia coli} SCOP: a.103.1.1 PDB: 3l97_A* 3l98_A* 3l99_A 1k3p_A 1nxe_A 1nxg_A* 1owb_A* 1owc_A 4e6y_A
Probab=100.00 E-value=1.7e-126 Score=1005.69 Aligned_cols=418 Identities=44% Similarity=0.792 Sum_probs=398.7
Q ss_pred CccEEEEeccCCeEEEeeeeeCCC--cchhhhhhhhcCCCCcceeeecCCCcccceeeeeeeeEeCCCCeeEEcccCHHH
Q 010304 53 KGSLTVVDERTGKRYQIPVSQEGT--VKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEE 130 (513)
Q Consensus 53 ~~~l~~~~~r~g~~~~~pi~~~~~--~~a~di~~l~~~~~~~g~~~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~i~e 130 (513)
+.+|++.+ ||+|||||.. || .+++||++|++ +|+++|||||.||++|+|+||+|||++|+|+||||+|+|
T Consensus 4 ~~~~~~~~---~~~~~~pi~~-~~~~~~~~d~~~l~~----~g~~~~d~Gl~~~~~~~s~is~iDg~~G~L~YRGy~I~d 75 (426)
T 3l96_A 4 KAKLTLNG---DTAVELDVLK-GTLGQDVIDIRTLGS----KGVFTFDPGFTSTTSCESKITFIDGDEGILLHRGFPIDQ 75 (426)
T ss_dssp GGCEEEES---SSEEEECEEC-CSSSCCEEECTTHHH----HTCCEECTTSSSEEEEEESSEEEEGGGTEEEETTEEHHH
T ss_pred eEEEEeCC---CcEEEEeeee-CCCCCceeeeeeccc----CCcEEeCCCCCCceEEeEEeEEEECCCCEEEECCeEHHH
Confidence 46777753 6999999999 77 49999999986 899999999999999999999999999999999999999
Q ss_pred HhhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHHHHHHHHhCCCCCChhhHHHHHHHHhhccCCCCCCcccCC
Q 010304 131 LAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDIIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQ 210 (513)
Q Consensus 131 La~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~~~i~~~p~~~hPm~~l~a~v~al~~~~~~~~pa~~g~ 210 (513)
|+++++||||+||||+|+|||++|+++|+++|.+++.+|+.+.+++++||+++|||++|+++|++|++|+++...
T Consensus 76 La~~~~feevayLLl~G~LPt~~el~~f~~~l~~~~~lp~~~~~~~~~~p~~~hPM~~l~~~vsaL~~~~~~~~~----- 150 (426)
T 3l96_A 76 LATDSNYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLD----- 150 (426)
T ss_dssp HHHHSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCSCCHHHHHHHTTSCTTSCHHHHHHHHHTTGGGTCGGGCC-----
T ss_pred HHhcCCHHHHHHHHHCCcCCCHHHHHHHHHHHHHccCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCccccc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999877531
Q ss_pred CcccchhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhcC
Q 010304 211 DIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAE 290 (513)
Q Consensus 211 ~~~~~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p~~~lsy~eNfL~ml~~~~~~~~~p~p~~~~~Ld~~LILhAD 290 (513)
. .+.+...++++|||||+|+|+|++||++.|+++++|++++||++|||+||++.+...|+|+|..+++||++||||||
T Consensus 151 -~-~~~~~~~~~a~rLiAk~pti~a~~yr~~~G~~~~~p~~~ls~a~nfl~ml~g~~~~~~~p~~~~~~~ld~~LiLhAD 228 (426)
T 3l96_A 151 -V-NNPRHREIAAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHAD 228 (426)
T ss_dssp -T-TSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTSCHHHHHHHHHHCBTTBCCCCCHHHHHHHHHHHHTTSC
T ss_pred -C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHhhccc
Confidence 1 23455678899999999999999999999999999999999999999999998777889999999999999999999
Q ss_pred CCCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChHHHHHHHHHHhCCCCCHHHHHHHHHhcCC--cccccCCCCC
Q 010304 291 HEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKR--KMSGFGHRVY 368 (513)
Q Consensus 291 HelN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAneav~~mL~eI~~~~~i~~~i~~~~~~~~--rl~GFGHrVY 368 (513)
||+||||||+|+++||++|+|+||+|||++||||+||||||+|++||++|++++++++||++++++++ +|||||||||
T Consensus 229 He~N~ST~taRvvaSt~ad~ysaiaAgi~aL~GplHGGAne~v~~ml~~i~~~~~~~~~v~~~l~~~~~~~I~GfGHrVy 308 (426)
T 3l96_A 229 HEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEIGKKENIPEFVRRAKDKNDSFRLMGFGHRVY 308 (426)
T ss_dssp CSSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTTSSHHHHHHHHHHHCCSSSSTTTTSGGGCCSSCCTGGGTBCCSSC
T ss_pred CCCCchHHHHHHHhccCCcHHHHHHHHHHhccCCccCCHHHHHHHHHHHhcCchhHHHHHHHHHhCCCCcCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCCCchHHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHhccccccccCCCCchhhHHHHHHHHcCCCCCchhhHhhhhhh
Q 010304 369 KNYDPRAKVIRKLAEEVFSIVG-RDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRM 447 (513)
Q Consensus 369 k~~DPRA~iL~~~a~~l~~~~~-~~~ll~iA~~lE~~a~~d~yf~~r~LyPNVDfysg~i~~alGiP~~~~t~lFai~R~ 447 (513)
|++|||+++|+++|++++++.+ .++++++|.+||+++.+|+||++|++|||||||+|+||++||||++|||+||+++|+
T Consensus 309 k~~DPRa~~l~~~a~~l~~~~g~~~~~~~~a~~le~~~~~~~~~~~k~l~pNVDfysg~i~~~lGip~~~ft~lFaisR~ 388 (426)
T 3l96_A 309 KNYDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMART 388 (426)
T ss_dssp SSCCTTHHHHHHHHHHHHHHTCSCCSSTTHHHHHHHHHHHCHHHHHHTCCBCHHHHHHHHHHHTTCCTHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcccccccCCCCchHHHHHHHHHHcCCCcccchhhhHHHHH
Confidence 9999999999999999998887 689999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHhhhcCCCCCccCCcccccCCCCccccccccc
Q 010304 448 AGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKER 486 (513)
Q Consensus 448 ~GwiAH~~Eq~~~~~~ki~RPr~~Y~G~~~r~~~p~~~R 486 (513)
+||+|||+||+.+ ++||+||||+|+|+.+|+|+|+++|
T Consensus 389 ~Gw~AH~~Eq~~~-~~~I~RPr~~Y~G~~~r~y~p~~~R 426 (426)
T 3l96_A 389 VGWIAHWSEMHSD-GMKIARPRQLYTGYEKRDFKSDIKR 426 (426)
T ss_dssp HHHHHHHHHHHHH-HCCCCCCEEEECSCCCCCCCCSCCC
T ss_pred HHHHHHHHHHHhc-CCCccCCcceecCCCCCCCcccccC
Confidence 9999999999986 5899999999999999999999998
No 3
>3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis}
Probab=100.00 E-value=5.7e-125 Score=993.49 Aligned_cols=409 Identities=41% Similarity=0.756 Sum_probs=378.6
Q ss_pred ccEEEEeccCCeEEEeeeeeCCC--cchhhhhhhhcCCCCcceeeecCCCcccceeeeeeeeEeCCCCeeEEcccCHHHH
Q 010304 54 GSLTVVDERTGKRYQIPVSQEGT--VKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEEL 131 (513)
Q Consensus 54 ~~l~~~~~r~g~~~~~pi~~~~~--~~a~di~~l~~~~~~~g~~~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~i~eL 131 (513)
.+|++.+ .||+|||||.. || .+++||++|++ +|+++|||||.||++|+|+||+|||++|+|+||||+|+||
T Consensus 13 ~~~~~~~--~~~~~~~pi~~-~~~g~~~~d~~~l~~----~G~~t~d~Gl~~~~~~~s~is~iDg~~G~L~YRGy~I~dL 85 (427)
T 3msu_A 13 ATLKYAD--KNIEIELPVYS-PSLGNDCIDVSSLVK----HGIFTYDPGFMSTAACESKITYIDGGKGVLLHRGYPIEEW 85 (427)
T ss_dssp EEEEEGG--GTEEEEEEEEC-CSSSCEEEECGGGGG----GTEEEECTTCTTEEEEEESSEEEETTTTEEEETTEEHHHH
T ss_pred EEEEECC--CCcEEEeeeee-CCCCCceeeeHhhhh----CCCEeeCCCcCCceEEEEEeeEEeCCCCEEEECCeEHHHH
Confidence 4555521 15999999999 77 49999999986 8999999999999999999999999999999999999999
Q ss_pred hhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHHHHHHHHhCCCCCChhhHHHHHHHHhhccCCCCCCcccCCC
Q 010304 132 AESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDIIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQD 211 (513)
Q Consensus 132 a~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~~~i~~~p~~~hPm~~l~a~v~al~~~~~~~~pa~~g~~ 211 (513)
+++++||||+||||+|+|||++|+++|+++|.+++.+|+.+.+++++||+++|||++|++++++|++|+++.
T Consensus 86 a~~~~feevayLLl~G~LPt~~el~~f~~~l~~~~~lp~~~~~~i~~~p~~~hPM~~L~~~v~aL~~~~~~~-------- 157 (427)
T 3msu_A 86 TQKSNYRTLCYALIYGELPTDEQVKSFRQEIINKMPVCEHVKAAIAAMPQHTHPMSSLIAGVNVLAAEHIHN-------- 157 (427)
T ss_dssp HHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHHHHT--------
T ss_pred hccCCHHHHHHHHHcCcCCCHHHHHHHHHHHHHccCCCHHHHHHHHhCCCCCCHHHHHHHHHHHHhhhccCC--------
Confidence 999999999999999999999999999999999999999999999999999999999999999999987221
Q ss_pred cccchhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 010304 212 IYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEH 291 (513)
Q Consensus 212 ~~~~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p~~~lsy~eNfL~ml~~~~~~~~~p~p~~~~~Ld~~LILhADH 291 (513)
.+++...++++|||||+|+|+|++||++.|+++++|++++||++|||+||++. ...|+|+|..+++||++|||||||
T Consensus 158 --~~~~~~~~~a~rLiAk~pti~a~~yr~~~G~~~~~p~~~ls~a~NfL~ml~~~-~~~~~p~~~~~~~ld~~LiLhADH 234 (427)
T 3msu_A 158 --GQKESQDEVAKNIVAKIATIAAMAYRHNHGKKFLEPKMEYGYAENFLYMMFAD-DESYKPDELHIKAMDTIFMLHADH 234 (427)
T ss_dssp --TSCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHHHCS-STTCCCCHHHHHHHHHHHHHHSCC
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCccCHHHHHHHHHhcc-cccCCCCHHHHHHHHHHHhhccCC
Confidence 12334567899999999999999999999999999999999999999999986 567899999999999999999999
Q ss_pred CCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChHHHHHHHHHHhCCCCCHHHHHHHHHhcCC--cccccCCCCCC
Q 010304 292 EMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKR--KMSGFGHRVYK 369 (513)
Q Consensus 292 elN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAneav~~mL~eI~~~~~i~~~i~~~~~~~~--rl~GFGHrVYk 369 (513)
|+||||||+|++|||++|+|+||+|||+|||||+||||||+|++||++|++++++++||++++++|+ +||||||||||
T Consensus 235 e~N~ST~taRvvaSt~ad~ysavaAgi~aL~GPlHGGAne~v~~ml~ei~~~~~~~~~v~~~l~~~~~~~i~GFGHrVYk 314 (427)
T 3msu_A 235 EQNASTSTVRLSGSTGNSPYAAIIAGITALWGPAHGGANEAVLKMLSEIGSTENIDKYIAKAKDKDDPFRLMGFGHRVYK 314 (427)
T ss_dssp SSCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSHHHHCHHHHHHHHHHHHCSTTHHHHHHHHHHTC-----CCSBCCSSSS
T ss_pred CCChhHHHHHHHHccCCCHHHHHHHHHHHccCCccCCHHHHHHHHHHHhcCchHHHHHHHHHHhCCCCcCcCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred CCCchHHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHhccccccccCCCCchhhHHHHHHHHcCCCCCchhhHhhhhhh
Q 010304 370 NYDPRAKVIRKLAEEVFSIVG--RDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRM 447 (513)
Q Consensus 370 ~~DPRA~iL~~~a~~l~~~~~--~~~ll~iA~~lE~~a~~d~yf~~r~LyPNVDfysg~i~~alGiP~~~~t~lFai~R~ 447 (513)
++||||++|+++|++++++.| .+|++++|.+||+++.+|+||++||+|||||||+|+||++||||++|||+||+++|+
T Consensus 315 ~~DPRa~~Lk~~a~~l~~~~g~~~~~~~~la~~le~~a~~d~~~~~k~l~pNVDfysg~i~~~lGip~~~ft~lFaisR~ 394 (427)
T 3msu_A 315 NTDPRATAMKKNCEEILAKLGHSDNPLLTVAKKLEEIALQDEFFIERKLFSNVDFYSGIILKAMGIPEDMFTAIFALART 394 (427)
T ss_dssp SCCHHHHHHHHHTHHHHHHGGGCSSHHHHHHHHHHHHHC------CCCCCBCHHHHHHHHHHHTTCCGGGHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhhcccccccCCCCChHHHHHHHHHHcCCCccccceehhHHhH
Confidence 999999999999999988777 589999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHhhhcCCCCCccCCcccccCCCCccc
Q 010304 448 AGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHY 480 (513)
Q Consensus 448 ~GwiAH~~Eq~~~~~~ki~RPr~~Y~G~~~r~~ 480 (513)
+||+|||+||+.+|++||+||||+|+|+.+|+|
T Consensus 395 ~Gw~AH~~Eq~~~p~~rI~RPr~~Y~G~~~r~~ 427 (427)
T 3msu_A 395 SGWISQWIEMVNDPAQKIGRPRQLYTGATNRNF 427 (427)
T ss_dssp HHHHHHHHHHHHCTTCCCCCCEEEECSCCSCCC
T ss_pred HHHHHHHHHHHhCCCCceeCCCceecCCCCCCC
Confidence 999999999999988999999999999999987
No 4
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=100.00 E-value=7.3e-115 Score=905.39 Aligned_cols=372 Identities=30% Similarity=0.504 Sum_probs=343.1
Q ss_pred cceeeecCCCcccceeeeeeeeEeCCCCeeEEcccCHHHHhhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHH
Q 010304 92 KGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQG 171 (513)
Q Consensus 92 ~g~~~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~i~eLa~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~ 171 (513)
.|+.+|||||.||++|+|+||+|||++|+|+||||+|+||+++++||||+||||+|+|||++|+++|+++|.+++.+|+.
T Consensus 2 ~~~~~~~~Gl~gv~~~~t~Is~idg~~g~L~YRGy~I~dLa~~~~feev~yLLl~G~lPt~~el~~f~~~l~~~~~lp~~ 81 (375)
T 3tqg_A 2 NAMTKTAKGLRGQSAGETSIATVGKEGHGLTYRGYRIEDLAANATFEEVAYLLLKNKLPTKSELDAYTKKLVNLRSLPPA 81 (375)
T ss_dssp --------------CCEESSEEECTTSCCEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCCCCHH
T ss_pred CCCcccCCccCCCeEeeeeceEEeCCCCEEEECCeeHHHHHhcCCHHHHHHHHHcCcCcCHHHHHHHHHHHHHccCCCHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCChhhHHHHHHHHhhccCCCCCCcccCCCcccchhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCCCC
Q 010304 172 ILDIIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSN 251 (513)
Q Consensus 172 v~~~i~~~p~~~hPm~~l~a~v~al~~~~~~~~pa~~g~~~~~~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p~~ 251 (513)
+.++|++||+++|||++|++++++|++++++.+ .+...++++|||||+|+|+|++||++.|+++++|++
T Consensus 82 ~~~~~~~~p~~~hpM~~l~~~v~aL~~~~~~~~-----------~~~~~~~a~~LiAk~p~i~a~~yr~~~g~~~i~p~~ 150 (375)
T 3tqg_A 82 LKDTLERIPASSHPMDVMRTGCSMLGNLEPENG-----------FENEQNIADRLVAIFPAIQCYWYHYSHHGKRIDTEL 150 (375)
T ss_dssp HHHHHHTSCTTSCHHHHHHHHHHHHHHHSCCCS-----------GGGHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred HHHHHHhCCCCCChHHHHHHHHHHHHhcCCCCC-----------hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCC
Confidence 999999999999999999999999999998763 123357889999999999999999999999999998
Q ss_pred C-CCHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChH
Q 010304 252 N-LSYSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGAN 330 (513)
Q Consensus 252 ~-lsy~eNfL~ml~~~~~~~~~p~p~~~~~Ld~~LILhADHelN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAn 330 (513)
+ +||++|||+||++ .+|+|.++++||++||||||||+||||||+|+++||++|+|+||+|||++||||+|||||
T Consensus 151 ~~ls~a~nfl~ml~g-----~~p~~~~~~~ld~~Lil~ADHe~n~St~tarvvaSt~ad~ysavaagi~aL~GplHGGAn 225 (375)
T 3tqg_A 151 DDLTLAGYFLHLLLG-----KKAAQMAIDCMNASLILYAEHEFNASTFAARVCSATLSDIYSAVTAAIATLRGPLHGGAN 225 (375)
T ss_dssp CCSSHHHHHHHHHHS-----SCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSHHHHCHH
T ss_pred ccccHHHHHHHHhcC-----CCCCHHHHHHHHHHHHHhccCCCCHHHHHHHHHHccCCCHHHHHHHHHHhccCcccCCHH
Confidence 7 9999999999986 478999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccc
Q 010304 331 EAVLKMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEY 410 (513)
Q Consensus 331 eav~~mL~eI~~~~~i~~~i~~~~~~~~rl~GFGHrVYk~~DPRA~iL~~~a~~l~~~~~~~~ll~iA~~lE~~a~~d~y 410 (513)
|+|++||++|++++++++||++.+++|++||||||||||++|||+++|+++|+++.+..+.++++++|.+||+++.+
T Consensus 226 e~v~~ml~~i~~~~~~~~~v~~~~~~~~~i~GfGHrVyk~~DPRa~~l~~~a~~l~~~~~~~~~~~~a~~le~~~~~--- 302 (375)
T 3tqg_A 226 EAAMDLIMLYKTPSEAIAGIKRKLANKELIMGFGHAVYRERDPRNAIIKSWAQKLAPNAADGYLFDISDAIENTMQD--- 302 (375)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHTTTSTTTHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHhcChhHHHHHHHHHHhcCCCccCCCCCCCCCCCccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH---
Confidence 99999999999888999999999999999999999999999999999999999997766778999999999999875
Q ss_pred ccccCCCCchhhHHHHHHHHcCCCCCchhhHhhhhhhhhhHHHHHhhhcCCCCCccCCcccccCCCCccccccccc
Q 010304 411 FVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKER 486 (513)
Q Consensus 411 f~~r~LyPNVDfysg~i~~alGiP~~~~t~lFai~R~~GwiAH~~Eq~~~~~~ki~RPr~~Y~G~~~r~~~p~~~R 486 (513)
.||+|||||||+|+||++||||++|||+||+++|++||+|||+||+.+ +||+|||+.|+|+.+|+|+|+++|
T Consensus 303 --~k~l~pNVDf~sg~i~~~lGip~~~~t~lFa~sR~~Gw~AH~~Eq~~~--~~iiRP~~~Y~G~~~r~~~p~~~R 374 (375)
T 3tqg_A 303 --EKKLFPNLDFYSATAYHFLNIPTKLFTPIFVMSRVTGWCAHIFEQRKD--NRIIRPNADYIGPEEQGWVPIEKR 374 (375)
T ss_dssp --HHCCCBCHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHS--CCCCCCEEEECSCCCBCCCCGGGC
T ss_pred --hcCCCCChHHHHHHHHHHcCCCHHHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCCcceecCCCCCCCCChhhc
Confidence 489999999999999999999999999999999999999999999985 699999999999999999999998
No 5
>1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1
Probab=100.00 E-value=4.2e-114 Score=901.86 Aligned_cols=375 Identities=36% Similarity=0.650 Sum_probs=349.4
Q ss_pred eeeecCCCcccceeeeeeeeEeCCCCeeEEcccCHHHHhhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHHHH
Q 010304 94 LKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGIL 173 (513)
Q Consensus 94 ~~~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~i~eLa~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~ 173 (513)
+++|||||.||++|+|+||+|||++|+|+||||||+||+++++||||+||||+|+|||++|+++|+++|..++.+|+.+.
T Consensus 1 ~~~~~~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~feeva~LL~~G~lPt~~el~~f~~~l~~~~~lp~~~~ 80 (377)
T 1o7x_A 1 MSVVSKGLENVIIKVTNLTFIDGEKGILRYRGYNIEDLVNYGSYEETIYLMLYGKLPTKKELNDLKAKLNEEYEVPQEVL 80 (377)
T ss_dssp --CBCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCCCCHHHH
T ss_pred CCCCCcccCCCeeeeeeCeEEECCCCEEEECCccHHHHHcCCCHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCCHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCChhhHHHHHHHHhhccCCCCCCcccCCCcccchhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCCCCCC
Q 010304 174 DIIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNL 253 (513)
Q Consensus 174 ~~i~~~p~~~hPm~~l~a~v~al~~~~~~~~pa~~g~~~~~~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p~~~l 253 (513)
++++.||+++|||++|++++++|++|+++.+ + .+...++++|||||+|+|+|++|+++.|+++++|++++
T Consensus 81 ~~~~~~p~~~hpM~~l~~~v~~l~~~~~~~~------~----~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~~~l 150 (377)
T 1o7x_A 81 DTIYLMPKEADAIGLLEVGTAALASIDKNFK------W----KENDKEKAISIIAKMATLVANVYRRKEGNKPRIPEPSD 150 (377)
T ss_dssp HHHHHSCTTSCHHHHHHHHHHHHHHHCCCCC------S----SSSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCS
T ss_pred HHHHhCcccCCcHHHHHHHHHHHhhcCCCcC------C----HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 9999999999999999999999999987652 1 12346789999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChHHHH
Q 010304 254 SYSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAV 333 (513)
Q Consensus 254 sy~eNfL~ml~~~~~~~~~p~p~~~~~Ld~~LILhADHelN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAneav 333 (513)
||++|||+||++. +|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||+|||||+||||||+|
T Consensus 151 s~a~nfl~ml~g~-----~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aSt~ad~~savaagi~aL~GplHGGAne~v 225 (377)
T 1o7x_A 151 SFAKSFLLASFAR-----EPTTDEINAMDKALILYTDHEVPASTTAALVAASTLSDMYSSLTAALAALKGPLHGGAAEEA 225 (377)
T ss_dssp CHHHHHHHHHHSS-----CCCHHHHHHHHHHHHHHSCCSCCHHHHHHHHHHHTTCCHHHHHHHHHHHHTSTTTTTHHHHH
T ss_pred CHHHHHHHHHhCC-----CCCHHHHHHHHHHHHHhccCCCChHHHHHHHHHhcCCcHHHHHHHHHHhcCCCCCCChHHHH
Confidence 9999999999973 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHH-hcCCcccccCCCCCCCCCchHHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHhccccc
Q 010304 334 LKMLNEIGTVENIPEFIEGVK-NRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGR-DPLIEVAVALEKAALSDEYF 411 (513)
Q Consensus 334 ~~mL~eI~~~~~i~~~i~~~~-~~~~rl~GFGHrVYk~~DPRA~iL~~~a~~l~~~~~~-~~ll~iA~~lE~~a~~d~yf 411 (513)
++||++|++++++++||++.+ ++|++||||||||||++|||+++|+++|++++++.+. +++++++++||+++.+ ||
T Consensus 226 ~~ml~ei~~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~l~~~~~~~~~~~~~a~~le~~~~~--~~ 303 (377)
T 1o7x_A 226 FKQFIEIGDPNRVQNWFNDKVVNQKNRLMGFGHRVYKTYDPRAKIFKKLALTLIERNADARRYFEIAQKLEELGIK--QF 303 (377)
T ss_dssp HHHHHHHCSGGGHHHHHHHHTTTTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--HH
T ss_pred HHHHHHhCChhHHHHHHHHHHHhcCCcccCCCccccCCCCCchHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH--HH
Confidence 999999999999999999999 9999999999999999999999999999999766666 7899999999999987 99
Q ss_pred cccCCCCchhhHHHHHHHHcCCCCCchhhHhhhhhhhhhHHHHHhhhcCCCCCccCCcccccCCCCccccccccc
Q 010304 412 VKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKER 486 (513)
Q Consensus 412 ~~r~LyPNVDfysg~i~~alGiP~~~~t~lFai~R~~GwiAH~~Eq~~~~~~ki~RPr~~Y~G~~~r~~~p~~~R 486 (513)
+.||+|||||||+|++|++||||+++||+||+++|++||+|||+||+.+| +||+|||++|+|+.+|+|+|+++|
T Consensus 304 ~~k~l~pNVD~~sg~v~~~lG~p~~~~t~lF~i~R~~Gw~AH~~Eq~~~~-~~i~RP~~~Y~G~~~r~~~p~~~r 377 (377)
T 1o7x_A 304 SSKGIYPNTDFYSGIVFYALGFPVYMFTALFALSRTLGWLAHIIEYVEEQ-HRLIRPRALYVGPEYQEYVSIDKR 377 (377)
T ss_dssp TTTTCCBCTTTTHHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHHHHHHHS-CCCCCCEEEECSCSCC--------
T ss_pred hhcCCCCChHHHHHHHHHHhCCChhhhhhHHHHhhhccHHHHHHHHHhcc-CCccCCcccccCCCCCCCCCcccC
Confidence 99999999999999999999999999999999999999999999999876 499999999999999999999987
No 6
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=100.00 E-value=8.9e-114 Score=899.65 Aligned_cols=374 Identities=35% Similarity=0.616 Sum_probs=357.4
Q ss_pred eeecCCCcccceeeeeeeeEeCCCCeeEEcccCHHHHhhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHHHHH
Q 010304 95 KLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILD 174 (513)
Q Consensus 95 ~~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~i~eLa~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~~ 174 (513)
++|||||.||++|+|+||+|||++|+|+||||||+|||++++||||+||||+|+|||++|+++|+++|..++.+|+.+.+
T Consensus 3 ~~~~~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~fEeva~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~~ 82 (378)
T 1vgm_A 3 VEVSRGLENVIIKTTGLTYIDGINGILRYRGYDINDLVNYASYEELIHLMLYGELPNRQQLNQIKGIINESFEVPEQVIS 82 (378)
T ss_dssp CCCSGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCCCCHHHHH
T ss_pred cccCCccCCCeeeeeeceEEECCCCeEEEcCeeHHHHHhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHccCCCHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCChhhHHHHHHHHhhccCCCCCCcccCCCcccchhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCCCCCCC
Q 010304 175 IIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLS 254 (513)
Q Consensus 175 ~i~~~p~~~hPm~~l~a~v~al~~~~~~~~pa~~g~~~~~~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p~~~ls 254 (513)
+++.+|+++|||++|++++++|++|+++.. + .+...++++|||||+|+|+|++|+++.|+++++|++++|
T Consensus 83 ~~~~~p~~~hpM~~l~~~v~~l~~~~~~~~------~----~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls 152 (378)
T 1vgm_A 83 TIFSMPRNCDAIGMMETAFGILASIYDPKW------N----RATNKELAVQIIAKTATITANIYRAKEGLKPKIPEPSES 152 (378)
T ss_dssp HHTTSCTTSCHHHHHHHHHHHHHHHHCCCC------C----TTTHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSC
T ss_pred HHHhCCCCCCcHHHHHHHHHHHhccCCccC------C----HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCC
Confidence 999999999999999999999999987652 1 233467899999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChHHHHH
Q 010304 255 YSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVL 334 (513)
Q Consensus 255 y~eNfL~ml~~~~~~~~~p~p~~~~~Ld~~LILhADHelN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAneav~ 334 (513)
|++|||+|+++. +|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||+|||||+||||||+|+
T Consensus 153 ~a~nfl~ml~g~-----~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aSt~~d~~savaagi~aL~GplHGGAne~v~ 227 (378)
T 1vgm_A 153 YAESFLAATFGK-----KPTQEEIKAMDASLILYTDHEVPASTTAALVASSTLSDMYSCIVAALAALKGPLHGGAAEEAF 227 (378)
T ss_dssp HHHHHHHHHHSS-----CCCHHHHHHHHHHHHHTSCCSCCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSCHHHHHH
T ss_pred HHHHHHHHHhCC-----CCCHHHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCcHHHHHHHHHHhccCCCCCChHHHHH
Confidence 999999999973 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHH-hcCCcccccCCCCCCCCCchHHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHhcccccc
Q 010304 335 KMLNEIGTVENIPEFIEGVK-NRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVG-RDPLIEVAVALEKAALSDEYFV 412 (513)
Q Consensus 335 ~mL~eI~~~~~i~~~i~~~~-~~~~rl~GFGHrVYk~~DPRA~iL~~~a~~l~~~~~-~~~ll~iA~~lE~~a~~d~yf~ 412 (513)
+||++|++++++++||++.+ ++|++||||||||||++|||+++|+++|++++++.+ .+++++++++||+++.+ ||+
T Consensus 228 ~ml~ei~~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~le~~~~~--~~~ 305 (378)
T 1vgm_A 228 KQFVEIGSVENADKWFEEKIIKGKSRLMGFGHRVYKTYDPRAKIFKTLAKSFAEKNENVKKYYEIAERIEKLGVD--TFG 305 (378)
T ss_dssp HHHHHHCSGGGHHHHHHHHTTTSCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--HHG
T ss_pred HHHHHhCCHhHHHHHHHHHHHhcCCcccCCCCcccCCCCCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH--HHh
Confidence 99999999999999999999 999999999999999999999999999999976656 57899999999999986 999
Q ss_pred ccCCCCchhhHHHHHHHHcCCCCCchhhHhhhhhhhhhHHHHHhhhcCCCCCccCCcccccCCCCccccccccc
Q 010304 413 KRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKER 486 (513)
Q Consensus 413 ~r~LyPNVDfysg~i~~alGiP~~~~t~lFai~R~~GwiAH~~Eq~~~~~~ki~RPr~~Y~G~~~r~~~p~~~R 486 (513)
.||+|||||||+|++|++||||+++||+||+++|++||+|||+||+.+| +||+|||++|+|+.+|+|+|+++|
T Consensus 306 ~k~l~pNVDf~sg~i~~~lGip~~~~t~lFaisR~~Gw~AH~~Eq~~~~-~~i~RP~~~Y~G~~~r~~~p~~~r 378 (378)
T 1vgm_A 306 SKHIYPNTDFYSGIVFYALGFPIYMFTSLFALSRVLGWLAHIIEYVEEQ-HRLIRPRALYIGPEKREFKPIELR 378 (378)
T ss_dssp GGTCCBCTTTTHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHS-CCCCCCEEEECSCCCCCCCCGGGC
T ss_pred hCCCCCChHHHHHHHHHHhCCCHHhhhHHHHHHhhccHHHHHHHHHhcc-CCccCcccccCCCCCCCCCCcccC
Confidence 9999999999999999999999999999999999999999999999876 499999999999999999999988
No 7
>3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica}
Probab=100.00 E-value=3.2e-113 Score=899.31 Aligned_cols=372 Identities=32% Similarity=0.535 Sum_probs=342.0
Q ss_pred eecCCCcccceeeeeeeeEeCCCCeeEEcccCHHHHhhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHHHHHH
Q 010304 96 LYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDI 175 (513)
Q Consensus 96 ~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~i~eLa~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~~~ 175 (513)
.|||||.||++|+|+||+|||++|+|+||||+|+||+++++||||+||||+|+|||++|+++|+++|..++.+|+.+.++
T Consensus 32 ~~~~Gl~gv~~~~T~Is~idg~~g~L~YRGy~I~dLa~~~~fEevayLLl~G~LPt~~el~~f~~~l~~~~~lp~~~~~~ 111 (404)
T 3o8j_A 32 KKSVALSGVPAGNTALCTVGKSGNDLHYRGYDILDLAEHCEFEEVAHLLIHGKLPTRDELNAYKSKLKALRGLPANVRTV 111 (404)
T ss_dssp ---------CCCEESSEEECC-CCCEEETTEEHHHHHHHCCHHHHHHHHHTSSCCCHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred CCCCCCCCceEeeeeceeeeCCCCEEEECCeEHHHHHhcCCHHHHHHHHHcCcCCCHHHHHHHHHHHHHccCCCHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCChhhHHHHHHHHhhccCCCCCCcccCCCcccchhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCC-CCCCC
Q 010304 176 IQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLP-SNNLS 254 (513)
Q Consensus 176 i~~~p~~~hPm~~l~a~v~al~~~~~~~~pa~~g~~~~~~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p-~~~ls 254 (513)
+++||+++|||++|++++++|++|+++... . +.....++++|||||+|+|+|++|+++.|.+++.| ++++|
T Consensus 112 ~~~~p~~~hPM~~L~~~vsaL~~~~~~~~d------~--~~~~~~~~a~rLiAk~pti~a~~yr~~~g~~~i~~~~~~ls 183 (404)
T 3o8j_A 112 LEALPAASHPMDVMRTGVSALGCTLPEKEG------H--TVSGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDS 183 (404)
T ss_dssp HHTSCTTSCHHHHHHHHHHHHHHHSCCCTT------C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCSS
T ss_pred HHhCCCCCChHHHHHHHHHHHHhcCccccc------C--CcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCC
Confidence 999999999999999999999999987641 1 22334567789999999999999999887776664 48999
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChHHHHH
Q 010304 255 YSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVL 334 (513)
Q Consensus 255 y~eNfL~ml~~~~~~~~~p~p~~~~~Ld~~LILhADHelN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAneav~ 334 (513)
|++|||+||++ .+|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||++||||+||||||+|+
T Consensus 184 ~a~nfl~ml~g-----~~p~~~~~~~ld~~LiLhADHe~N~St~taRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~ 258 (404)
T 3o8j_A 184 IGGHFLHLLHG-----EKPTQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSDVYSAIIGAIGALRGPKHGGANEVSL 258 (404)
T ss_dssp HHHHHHHHHHS-----SCCCHHHHHHHHHHHHHTSCCSSSHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTTCHHHHHH
T ss_pred HHHHHHHHhcC-----CCCCHHHHHHHHHHHhhccCCCCChHHHHHHHHHhcCCCHHHHHHHHHHHccCCCcCCHHHHHH
Confidence 99999999986 4789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccccccc
Q 010304 335 KMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKR 414 (513)
Q Consensus 335 ~mL~eI~~~~~i~~~i~~~~~~~~rl~GFGHrVYk~~DPRA~iL~~~a~~l~~~~~~~~ll~iA~~lE~~a~~d~yf~~r 414 (513)
+||++|++++++++||++.+++|++||||||||||++|||+++|+++|+++++..+.++++++|.+||+++. ++|
T Consensus 259 ~ml~~i~~~~~~~~~v~~~l~~~~~I~GFGHrVyk~~DPRa~~l~~~a~~l~~~~g~~~~~~~a~~le~~~~-----~~k 333 (404)
T 3o8j_A 259 EIQQRYETPDEAEADIRKRVENKEVVIGFGHPVYTIADPRHQVIKRVAKQLSEEGGSLKMYHIADRLETVMW-----ETK 333 (404)
T ss_dssp HHHTTCSSHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHH-----HHH
T ss_pred HHHHHhcCchhHHHHHHHHHhcCCcccCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH-----Hhc
Confidence 999999988899999999999999999999999999999999999999999887788899999999999985 478
Q ss_pred CCCCchhhHHHHHHHHcCCCCCchhhHhhhhhhhhhHHHHHhhhcCCCCCccCCcccccCCCCcccccccccc
Q 010304 415 KLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKERM 487 (513)
Q Consensus 415 ~LyPNVDfysg~i~~alGiP~~~~t~lFai~R~~GwiAH~~Eq~~~~~~ki~RPr~~Y~G~~~r~~~p~~~R~ 487 (513)
|+|||||||+|+||++||||+++||+||+++|++||+|||+||+.+ +||+||||+|+|+.+|+|+|+++|.
T Consensus 334 ~l~pNVDf~sg~i~~~lGip~~~~t~lFaisR~~Gw~AH~~Eq~~~--~riiRPr~~Y~G~~~r~y~p~~~R~ 404 (404)
T 3o8j_A 334 KMFPNLDWFSAVSYNMMGVPTEMFTPLFVIARVTGWAAHIIEQRQD--NKIIRPSANYTGPEDRPFVSIDDRC 404 (404)
T ss_dssp CCCBCTTTHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCEEECSCCSCCCCCGGGCC
T ss_pred CCCcChHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHHHHHHhc--CCCCCCcceecCCCCCCCCchhhcC
Confidence 9999999999999999999999999999999999999999999985 7999999999999999999999983
No 8
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=100.00 E-value=4.2e-112 Score=886.76 Aligned_cols=375 Identities=39% Similarity=0.673 Sum_probs=356.9
Q ss_pred eecCCCcccceeeeeeeeEeCCCCeeEEcccCHHHHhhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHHHHHH
Q 010304 96 LYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDI 175 (513)
Q Consensus 96 ~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~i~eLa~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~~~ 175 (513)
++||||.||++|+|+||+|||++|+|+||||||+|||++++||||+||||+|+|||++|+++|+++|..++.+|+.+.++
T Consensus 2 ~~~~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~~ 81 (377)
T 1iom_A 2 EVARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLES 81 (377)
T ss_dssp -CCGGGTTCCCSCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCSCCHHHHHH
T ss_pred CCCcccCCCeeeeeeCeEEECCCCEEEEcCeeHHHHHccCCHHHHHHHHHCCCCcCHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCChhhHHHHHHHHhhccCCCCCCcccCCCcccchhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCCCCCCCH
Q 010304 176 IQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSY 255 (513)
Q Consensus 176 i~~~p~~~hPm~~l~a~v~al~~~~~~~~pa~~g~~~~~~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p~~~lsy 255 (513)
|+.||.++|||++|++++++|++|+++.. +. +.+...++++|||+|+|+|+|++|+++.|+++++|++++||
T Consensus 82 ~~~~p~~~hpM~~l~~~v~~l~~~~~~~~------~~--~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls~ 153 (377)
T 1iom_A 82 FKRYPVSAHPMSFLRTAVSEFGMLDPTEG------DI--SREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSH 153 (377)
T ss_dssp HTTSCTTSCHHHHHHHHHHHHHHTCTTTT------CC--SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCH
T ss_pred HHhCCcCCCchhHHHHHHHHHhccCCCcc------cC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCH
Confidence 99999999999999999999999987652 11 34455778999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChHHHHHH
Q 010304 256 SENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLK 335 (513)
Q Consensus 256 ~eNfL~ml~~~~~~~~~p~p~~~~~Ld~~LILhADHelN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAneav~~ 335 (513)
++|||+|+++ .+|+|..+++||++||||||||+|+||||+|+++||++|+|+||+|||+|||||+||||||+|++
T Consensus 154 a~nfl~ml~g-----~~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aSt~~d~~savaagi~aL~GplHGGAne~v~~ 228 (377)
T 1iom_A 154 AANFLYMANG-----VEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMR 228 (377)
T ss_dssp HHHHHHHHHS-----SCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCHHHHHHH
T ss_pred HHHHHHHhcC-----CCCCHHHHHHHHHHHHHhccCCCCchHHHHHHHhhcCCcHHHHHHHHHHHcccCccCChhHHHHH
Confidence 9999999987 36899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCHHHHHHHHHhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhccccccccC
Q 010304 336 MLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRK 415 (513)
Q Consensus 336 mL~eI~~~~~i~~~i~~~~~~~~rl~GFGHrVYk~~DPRA~iL~~~a~~l~~~~~~~~ll~iA~~lE~~a~~d~yf~~r~ 415 (513)
||++|++++++++||++.+++|++||||||||||++|||+++|+++|++++++.+.+++++++++||+++.+ +|| .||
T Consensus 229 ml~ei~~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~L~~~~~~l~~~~~~~~~~~~a~~le~~~~~-~~~-~k~ 306 (377)
T 1iom_A 229 MIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGK-VLN-PRG 306 (377)
T ss_dssp HHHHHCSHHHHHHHHHHHHHTTCCCTTBSCSSCSSCCTTHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH-HHT-TTT
T ss_pred HHHHhcCchhHHHHHHHHHHCCCcccCCCCcccCCCCCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH-Hhc-cCC
Confidence 999999989999999999999999999999999999999999999999998877888999999999999987 477 899
Q ss_pred CCCchhhHHHHHHHHcCCCCCchhhHhhhhhhhhhHHHHHhhhc-CCCCCccCCcccccCCCCcccccccccc
Q 010304 416 LYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLD-DPDTKIMRPQQVYTGVWMRHYMPLKERM 487 (513)
Q Consensus 416 LyPNVDfysg~i~~alGiP~~~~t~lFai~R~~GwiAH~~Eq~~-~~~~ki~RPr~~Y~G~~~r~~~p~~~R~ 487 (513)
+|||||||+|++|++||||+++||+||+++|++||+|||+||+. + +||+||+++|+|+.+|+|+|+++|+
T Consensus 307 l~pNVD~~sg~i~~~lG~p~~~~t~lF~i~R~~Gw~AH~~Eq~~~~--~~i~RP~~~Y~G~~~r~~~p~~~r~ 377 (377)
T 1iom_A 307 IYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELD--NRLLRPGAKYVGELDVPYVPLEARE 377 (377)
T ss_dssp CCBCHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHT--CCCCCCCCCCCSCSSCCCCCGGGC-
T ss_pred CCCChHHHHHHHHHHcCCCHHhhhhHHHHhccccHHHHHHHHHhhc--CCcccccccccCCCCCCCCChhhcC
Confidence 99999999999999999999999999999999999999999998 5 5999999999999999999999993
No 9
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.5e-112 Score=897.31 Aligned_cols=380 Identities=39% Similarity=0.672 Sum_probs=360.1
Q ss_pred ecCCCcccceeeeeeeeEeCCCCeeEEcccCHHHHhhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHHHHHHH
Q 010304 97 YDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDII 176 (513)
Q Consensus 97 ~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~i~eLa~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~~~i 176 (513)
+||||.||++|+|+||+|||++|+|+||||||+||+++++||||+||||+|+|||++|+++|+++|..++.+|+.+.+++
T Consensus 22 ~~~Gl~gv~~~~t~Is~idg~~G~L~YRGy~i~dLa~~~~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~~~ 101 (409)
T 2ibp_A 22 IIHGLEDVLIKSTSISDIDGEKGILWYRGYRIEELARLSTYEEVSYLILYGRLPTKRELEDYINRMKKYRELHPATVEVI 101 (409)
T ss_dssp EEGGGTTCEEEEECSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred CCCCcCCCeeeeeeCeEEECCCCEEEEcCccHHHHHccCCHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCCHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCChhhHHHHHHHHhhccCCCCCCc----ccCCCccc--chhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCCC
Q 010304 177 QAMPHDAHPMGVLVSAMSALSIFHPDANPA----LKGQDIYK--SKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPS 250 (513)
Q Consensus 177 ~~~p~~~hPm~~l~a~v~al~~~~~~~~pa----~~g~~~~~--~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p~ 250 (513)
+.||.+ |||++|++++++|++++++.+.. ..| .++ +.+...++++|||+|+|+|+|++|+++.|+++++|+
T Consensus 102 ~~~p~~-hPM~~l~~~v~aL~~~~~~~~~~~~~~~~g--~~k~~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~ 178 (409)
T 2ibp_A 102 RNLAKA-HPMFALEAAVAAEGAYDEDNQKLIEALSVG--RYKAEEKELAYRIAEKLVAKMPTIVAYHYRFSRGLEVVRPR 178 (409)
T ss_dssp HHTTTS-CHHHHHHHHHHHHHHHCHHHHHHHHHHHTT--CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HhCCcc-CchHHHHHHHHHHhccCccccchhhhhhcc--cccccCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCC
Confidence 999999 99999999999999998754211 122 222 244567789999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChH
Q 010304 251 NNLSYSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGAN 330 (513)
Q Consensus 251 ~~lsy~eNfL~ml~~~~~~~~~p~p~~~~~Ld~~LILhADHelN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAn 330 (513)
+++||++|||+||++ .+|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||+|||||+|||||
T Consensus 179 ~~ls~a~nfl~ml~g-----~~p~~~~~~~ld~~LvL~ADHg~naST~aaRv~aSt~ad~~savaagi~aL~GplHGGAn 253 (409)
T 2ibp_A 179 DDLGHAANFLYMMFG-----REPDPLASRGIDLYLILHADHEVPASTFAAHVVASTLSDLYSSVAAAIAALKGPLHGGAN 253 (409)
T ss_dssp TTSCHHHHHHHHHHS-----SCCCHHHHHHHHHHHHHTSCCSCCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSCHH
T ss_pred CCCCHHHHHHHHHhC-----CCCCHHHHHHHHHHHHHhcCCCCChhHHHHHHHhhcCCcHHHHHHHHHHHccCCccCCch
Confidence 999999999999996 368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHhc-CCcccccCCCCCCCCCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHhcc
Q 010304 331 EAVLKMLNEIGTVENIPEFIEGVKNR-KRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRD-PLIEVAVALEKAALSD 408 (513)
Q Consensus 331 eav~~mL~eI~~~~~i~~~i~~~~~~-~~rl~GFGHrVYk~~DPRA~iL~~~a~~l~~~~~~~-~ll~iA~~lE~~a~~d 408 (513)
|+|++||++|++++++++||++++++ |++||||||||||++|||+++|+++|++++++.+.+ ++++++++||++++++
T Consensus 254 e~v~~ml~ei~~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~l~~~~~~~g~~~~~a~~le~~~l~~ 333 (409)
T 2ibp_A 254 EMAVRNYLEIGTPAKAKEIVEAATKPGGPKLMGVGHRVYKAYDPRAKIFKEFSRDYVAKFGDPQNLFAIASAIEQEVLSH 333 (409)
T ss_dssp HHHHHHHHHHCCGGGHHHHHHHHTSTTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHHHHCCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhcCCcCcCCCccccCCCCCchHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHccc
Confidence 99999999999999999999999998 999999999999999999999999999998887876 9999999999999999
Q ss_pred ccccccCCCCchhhHHHHHHHHcCCCCCchhhHhhhhhhhhhHHHHHhhhcCCCCCccCCcccccCCCCccccccccc
Q 010304 409 EYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKER 486 (513)
Q Consensus 409 ~yf~~r~LyPNVDfysg~i~~alGiP~~~~t~lFai~R~~GwiAH~~Eq~~~~~~ki~RPr~~Y~G~~~r~~~p~~~R 486 (513)
+||++||+|||||||+|++|++||||.++||+||+++|++||+|||+||+.+ ++|+|||++|+|+.+|+|+|+++|
T Consensus 334 ~~~~~k~l~pNVDf~sg~i~~~lGip~~~~t~lFaisR~~Gw~AH~~Eq~~~--~~i~RP~~~Y~G~~~r~~~p~~~r 409 (409)
T 2ibp_A 334 PYFQQRKLYPNVDFWSGIAFYYMGIPYEYFTPIFAMSRVVGWVAHVLEYWEN--NRIFRPRACYIGPHDLQYIPLEQR 409 (409)
T ss_dssp HHHHHTTCCBCGGGTHHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHHHHGGG--CCCCCCEEEECSCCCCCCCCGGGC
T ss_pred hhhhhcCCCCChHHHHHHHHHHhCCCHHhhhhHHHHhccccHHHHHHHHHhc--CCccCchhhccCCCCCCCCCcccC
Confidence 9999999999999999999999999999999999999999999999999985 589999999999999999999988
No 10
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4e-112 Score=892.70 Aligned_cols=398 Identities=32% Similarity=0.509 Sum_probs=349.3
Q ss_pred CCCCCCccEEEEeccCCeEEEeeeeeCCCcchhhhhhhhcCCCCcceeeecCCCcccceeeeeeeeEeCCCCeeEEcccC
Q 010304 48 PPGNLKGSLTVVDERTGKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYP 127 (513)
Q Consensus 48 ~~~~~~~~l~~~~~r~g~~~~~pi~~~~~~~a~di~~l~~~~~~~g~~~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~ 127 (513)
+++++.+++|+ .|++-..+.|+.. +.+...+.|. .|||||.||++|+|+||+|||++|+|+||||+
T Consensus 14 ~~~~~~~~~~~-------~~~~~~~~~~~~~------~~~~~~d~~~-~~~~Gl~gv~~~~t~Is~idg~~G~L~YRGy~ 79 (414)
T 3hwk_A 14 AQTQGPGSMTG-------PLAAARSVAATKS------MTAPTVDERP-DIKKGLAGVVVDTTAISKVVPQTNSLTYRGYP 79 (414)
T ss_dssp ------------------------------------------------CCCGGGTTCEEEEESSEEEETTTTEEEETTEE
T ss_pred CCCCCCCceee-------eHHHHHHhhCCcc------cCCccccCCC-CCCCCCCCCeeeeeeceEEeCCCCEEEECCeE
Confidence 34556677776 3344333333322 2222345677 89999999999999999999999999999999
Q ss_pred HHHHhhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHHHHHHHHhCCCCCChhhHHHHHHHHhhccCCCCCCcc
Q 010304 128 IEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDIIQAMPHDAHPMGVLVSAMSALSIFHPDANPAL 207 (513)
Q Consensus 128 i~eLa~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~~~i~~~p~~~hPm~~l~a~v~al~~~~~~~~pa~ 207 (513)
|+||+++++||||+||||+|+|||++|+++|+++|..++.+|+.+.++|+.||+++|||++|++++++|++++++...
T Consensus 80 I~dLa~~~~fEevayLLl~G~LPt~~el~~f~~~l~~~~~lp~~v~~~i~~~p~~~hPM~~l~~~vsaL~~~~~~~~~-- 157 (414)
T 3hwk_A 80 VQDLAARCSFEQVAFLLWRGELPTDAELALFSQRERASRRVDRSMLSLLAKLPDNCHPMDVVRTAISYLGAEDPDEDD-- 157 (414)
T ss_dssp HHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCCCCHHHHHHHHHSCTTSCHHHHHHHHHHHHHHTCTTTTC--
T ss_pred HHHHHhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHhCCCCCCHHHHHHHHHHHHhhcCCcccC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999877531
Q ss_pred cCCCcccchhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHH
Q 010304 208 KGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYSENFLYMLDSLGNRAYKPNPRLARVLDVLFIL 287 (513)
Q Consensus 208 ~g~~~~~~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p~~~lsy~eNfL~ml~~~~~~~~~p~p~~~~~Ld~~LIL 287 (513)
.+...++++|||||+|+|+|++||++.|+++++|++++||++|||+||++ .+|+|.++++||++|||
T Consensus 158 --------~~~~~~~a~rLiAk~pti~a~~yr~~~g~~~~~p~~~ls~a~nfl~ml~g-----~~p~~~~~~~ld~~LiL 224 (414)
T 3hwk_A 158 --------AAANRAKAMRMMAVLPTIVAIDMRRRRGLPPIAPHSGLGYAQNFLHMCFG-----EVPETAVVSAFEQSMIL 224 (414)
T ss_dssp --------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHHHS-----SCCCHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHhcC-----CCCCHHHHHHHHHHHhh
Confidence 34456789999999999999999999999999999999999999999986 47999999999999999
Q ss_pred hcCCCCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChHHHHHHHHHHhCCCCCHHHHHHHHHhcCCcccccCCCC
Q 010304 288 HAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRV 367 (513)
Q Consensus 288 hADHelN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAneav~~mL~eI~~~~~i~~~i~~~~~~~~rl~GFGHrV 367 (513)
|||||+||||||+|+++||++|+|+||+|||++||||+||||||+|++||++|++++++++||++++++|++||||||||
T Consensus 225 hADHe~NaST~taRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~ei~~~~~~~~~v~~~l~~~~~I~GFGHrV 304 (414)
T 3hwk_A 225 YAEHGFNASTFAARVVTSTQSDIYSAVTGAIGALKGRLHGGANEAVMHDMIEIGDPANAREWLRAKLARKEKIMGFGHRV 304 (414)
T ss_dssp TSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTTHHHHHHHHHHHHHCSGGGHHHHHHHHHHTTCCCTTBCCSS
T ss_pred ccCCCCChHHHHHHHHHhcCCCHHHHHHHHHHHhcCCccCChHHHHHHHHHHhCCchHHHHHHHHHHhcCCCccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhccccccccCCCCchhhHHHHHHHHcCCCCCchhhHhhhhhh
Q 010304 368 YKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRM 447 (513)
Q Consensus 368 Yk~~DPRA~iL~~~a~~l~~~~~~~~ll~iA~~lE~~a~~d~yf~~r~LyPNVDfysg~i~~alGiP~~~~t~lFai~R~ 447 (513)
||++|||+++|+++|+++++..+.++++++|.+||+++.+ .||+|||||||+|+||++||||++|||+||+++|+
T Consensus 305 yk~~DPRa~~L~~~a~~l~~~~g~~~~~~~a~~le~~~~~-----~k~l~pNVDf~sg~i~~~lGip~~~~t~lFaisR~ 379 (414)
T 3hwk_A 305 YRHGDSRVPTMKRALERVGTVRDGQRWLDIYQVLAAEMAS-----ATGILPNLDFPTGPAYYLMGFDIASFTPIFVMSRI 379 (414)
T ss_dssp CSSCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-----HHCCCBCTHHHHHHHHHHHTCCGGGHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-----hcCCCCchHHHHHHHHHHhCCCHHHHHHHHHHHhH
Confidence 9999999999999999998877878999999999999976 48999999999999999999999999999999999
Q ss_pred hhhHHHHHhhhcCCCCCccCCcccccCCCCcccc
Q 010304 448 AGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYM 481 (513)
Q Consensus 448 ~GwiAH~~Eq~~~~~~ki~RPr~~Y~G~~~r~~~ 481 (513)
+||+|||+||+.+ +||+||||+|+|+.+|.+.
T Consensus 380 ~Gw~AH~~Eq~~~--~riiRPr~~Y~G~~~r~~p 411 (414)
T 3hwk_A 380 TGWTAHIMEQATA--NALIRPLSAYCGHEQRVLP 411 (414)
T ss_dssp HHHHHHHHHHHHS--CCCCCCEEEECSCCCCCCT
T ss_pred HHHHHHHHHHHhc--CCCcCCCceeeCCCCCCCC
Confidence 9999999999975 7999999999999988864
No 11
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=100.00 E-value=6.7e-112 Score=884.56 Aligned_cols=370 Identities=38% Similarity=0.674 Sum_probs=353.6
Q ss_pred eecCCCcccceeeeeeeeEeCCCCeeEEcccCHHHHhhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHHHHHH
Q 010304 96 LYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDI 175 (513)
Q Consensus 96 ~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~i~eLa~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~~~ 175 (513)
.+||||.||++|+|+||+|||++|+|+||||||+|||++++||||+||||+|+|||++|+++|+++|..++.+|+.+.++
T Consensus 2 ~~~~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~~La~~~~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~~ 81 (373)
T 1vgp_A 2 EIKKGLEDVYVKETEITYIDGELGRLYYRGYSIYDLAEFSNFEEVSYLILYGKLPNREELNWFQEKLREERYLPDFIIKF 81 (373)
T ss_dssp CCCTTCTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred CCCCccCCCeeeeeeCeEEECCCCEEEEcCeeHHHHHccCCHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCCHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCChhhHHHHHHHHhhccCCCCCCcccCCCcccchhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCCCCCCCH
Q 010304 176 IQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSY 255 (513)
Q Consensus 176 i~~~p~~~hPm~~l~a~v~al~~~~~~~~pa~~g~~~~~~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p~~~lsy 255 (513)
++.||+++|||++|++++++|++|++ .+ .+...+++++||+|+|+|+|++|+++.|+++++|++++||
T Consensus 82 ~~~~p~~~hpM~~l~~~v~~l~~~~~-~~-----------~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls~ 149 (373)
T 1vgp_A 82 LREVRKDAQPMDILRTAVSLLGIEDS-KN-----------DERTDIKGIKLISKFPTIVANYARLRKGLDIIEPDPKLSH 149 (373)
T ss_dssp HHHSCTTSCHHHHHHHHHHHHHHHCC-CC-----------SSCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCH
T ss_pred HHhCCCCCChHHHHHHHHHHHhccCC-CC-----------hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCH
Confidence 99999999999999999999999976 32 1122567899999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChHHHHHH
Q 010304 256 SENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLK 335 (513)
Q Consensus 256 ~eNfL~ml~~~~~~~~~p~p~~~~~Ld~~LILhADHelN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAneav~~ 335 (513)
++|||+||++ .+|+|..+++||++||||||||+|+||||+|+++||++|+|+||+|||+|||||+||||||+|++
T Consensus 150 a~nfl~ml~g-----~~p~~~~~~~ld~~Lvl~ADHg~n~ST~aaRv~aSt~ad~~savaagi~aL~GplHGGAne~v~~ 224 (373)
T 1vgp_A 150 SENFLYMLYG-----DRPNEIKSKAMDVTLILHIDHEMNASTFASLVVASTFSDLYSSIVAGISALKGPLHGGANYEALK 224 (373)
T ss_dssp HHHHHHHHHS-----SCCCHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHTTTCCHHHHHHHHHHHHTCTTSSSCCCHHHH
T ss_pred HHHHHHHhcC-----CCCCHHHHHHHHHHHHHhccCCCchHHHHHHHHHhcCccHHHHHHHHHHhcCCCCcCCHHHHHHH
Confidence 9999999986 36899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCHHHHHHHHHhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHhccccccc
Q 010304 336 MLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRD--PLIEVAVALEKAALSDEYFVK 413 (513)
Q Consensus 336 mL~eI~~~~~i~~~i~~~~~~~~rl~GFGHrVYk~~DPRA~iL~~~a~~l~~~~~~~--~ll~iA~~lE~~a~~d~yf~~ 413 (513)
||++|++++++++||++.+++|++||||||||||++|||+++|+++|++++++.+.+ ++++++++||+++.+ ||+.
T Consensus 225 ml~~i~~~~~~~~~i~~~l~~~~~i~GfGHrvyk~~DPRa~~L~~~~~~l~~~~~~~~~~~~~~a~~le~~~~~--~~~~ 302 (373)
T 1vgp_A 225 MFKEIGSPEKVNDYILNRLSNKQRIMGFGHRVYKTYDPRARILKQYAKLLAEKEGGEIYTLYQIAEKVEEIGIK--YLGP 302 (373)
T ss_dssp HHHHSCSSSSHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHH--HHGG
T ss_pred HHHHhcCchhHHHHHHHHHHcCCcccCCCccccCCCCCchHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH--hccc
Confidence 999999999999999999999999999999999999999999999999998888876 899999999999754 8899
Q ss_pred cCCCCchhhHHHHHHHHcCCCCCchhhHhhhhhhhhhHHHHHhhhcCCCCCccCCcccccCCCCccccccccc
Q 010304 414 RKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKER 486 (513)
Q Consensus 414 r~LyPNVDfysg~i~~alGiP~~~~t~lFai~R~~GwiAH~~Eq~~~~~~ki~RPr~~Y~G~~~r~~~p~~~R 486 (513)
||+|||||||+|++|++||||+++||+||+++|++||+|||+||+.+ ++|+||+++|+|+.+|+|+|+++|
T Consensus 303 k~l~pNVDf~sg~i~~~lGip~~~~t~lFaisR~~Gw~AH~~Eq~~~--~~i~RP~~~Y~G~~~r~~~p~~~r 373 (373)
T 1vgp_A 303 KGIYPNVDFFSSIVFYSLGFEPDFFPAVFASARVVGWVAHIMEYIKD--NKIIRPKAYYKGEIGKKYIPIDSR 373 (373)
T ss_dssp GTCCBCHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHGGG--CCCCCCCCCCCSCCCCCCCCSTTC
T ss_pred CCCCCChHHHHHHHHHHcCCCHHhhhhhHHhhccccHHHHHHHHHhc--CCCcCccccccCCCCCCCCCcccC
Confidence 99999999999999999999999999999999999999999999985 699999999999999999999988
No 12
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=100.00 E-value=3.8e-112 Score=889.27 Aligned_cols=375 Identities=31% Similarity=0.601 Sum_probs=356.2
Q ss_pred eecCCCcccceeeeeeeeEeCCCCeeEEcccCHHHHhh-cCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHHHHH
Q 010304 96 LYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAE-SSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILD 174 (513)
Q Consensus 96 ~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~i~eLa~-~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~~ 174 (513)
.|||||.||++|+|+||+|||++|+|+||||||+||++ +++||||+||||+|+|||++|+++|+++|..++.+|+.+.+
T Consensus 6 ~~~~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~ 85 (385)
T 2ifc_A 6 EISKGLEDVNIKWTRLTTIDGNKGILRYGGYSVEDIIASGAQDEEIQYLFLYGNLPTEQELRKYKETVQKGYKIPDFVIN 85 (385)
T ss_dssp CBCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHTTCCHHHHHHHHHHSSCCCHHHHHHHHHHHHGGGCCCHHHHH
T ss_pred CCCCCcCCCeeeeeeCeEEECCCCEEEECCccHHHHHhcCCCHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCCHHHHH
Confidence 38999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCChhhHHHHHHHHhhccCCCCCCcccCCCcccchhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCCCCCCC
Q 010304 175 IIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLS 254 (513)
Q Consensus 175 ~i~~~p~~~hPm~~l~a~v~al~~~~~~~~pa~~g~~~~~~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p~~~ls 254 (513)
+++.||+++|||++|++++++|++|+++.+ .+.+...++++|||+|+|+|+|++|+++.|+++++|++++|
T Consensus 86 ~~~~~p~~~hpM~~l~~~v~~l~~~~~~~~---------~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls 156 (385)
T 2ifc_A 86 AIRQLPRESDAVAMQMAAVAAMAASETKFK---------WNKDTDRDVAAEMIGRMSAITVNVYRHIMNMPAELPKPSDS 156 (385)
T ss_dssp HHHTSCTTSCHHHHHHHHHHHHHHHCTTCC---------CCTTTHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSC
T ss_pred HHHhCCCCCCchHHHHHHHHHHHhcCCccc---------CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 999999999999999999999999987652 02233467899999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChHHHHH
Q 010304 255 YSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVL 334 (513)
Q Consensus 255 y~eNfL~ml~~~~~~~~~p~p~~~~~Ld~~LILhADHelN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAneav~ 334 (513)
|++|||+|+++. +|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||+|||||+||||||+|+
T Consensus 157 ~a~nfl~ml~g~-----~p~~~~~~~ld~~Lvl~ADHg~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~ 231 (385)
T 2ifc_A 157 YAESFLNAAFGR-----KATKEEIDAMNTALILYTDHEVPASTTAGLVAVSTLSDMYSGITAALAALKGPLHGGAAEAAI 231 (385)
T ss_dssp HHHHHHHHHHTS-----CCCHHHHHHHHHHHHHTSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSSHHHHHH
T ss_pred HHHHHHHHHhCC-----CCCHHHHHHHHHHHhHhcCCCccHHHHHHHHHHhcCCcHHHHHHHHHHHccCCccCChHHHHH
Confidence 999999999973 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHH-hcCCcccccCCCCCCCCCchHHHHHHHHHHHHHH-hCCCcHHHHHHHHHHHHhcccccc
Q 010304 335 KMLNEIGTVENIPEFIEGVK-NRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSI-VGRDPLIEVAVALEKAALSDEYFV 412 (513)
Q Consensus 335 ~mL~eI~~~~~i~~~i~~~~-~~~~rl~GFGHrVYk~~DPRA~iL~~~a~~l~~~-~~~~~ll~iA~~lE~~a~~d~yf~ 412 (513)
+||++|++++++++||++++ ++|++||||||||||++|||+++|+++|++++++ .+.+++++++++||+++.+ ||+
T Consensus 232 ~ml~ei~~~~~~~~~i~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~le~~~~~--~~~ 309 (385)
T 2ifc_A 232 AQFDEIKDPAMVEKWFNDNIINGKKRLMGFGHRVYKTYDPRAKIFKGIAEKLSSKKPEVHKVYEIATKLEDFGIK--AFG 309 (385)
T ss_dssp HHHHHHCSGGGHHHHHHHHTTTSSSCCTTBCCSSCSSCCHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHH--HHG
T ss_pred HHHHHhCCHHHHHHHHHHHHHhcCCcccCCCCcccCCCCCchHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHH--HHh
Confidence 99999999999999999999 9999999999999999999999999999998754 4567899999999999987 999
Q ss_pred ccCCCCchhhHHHHHHHHcCCCC--CchhhHhhhhhhhhhHHHHHhhhcCCCCCccCCcccccCCCCcccccccccc
Q 010304 413 KRKLYPNVDFYSGLIYRAMGFPT--EFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKERM 487 (513)
Q Consensus 413 ~r~LyPNVDfysg~i~~alGiP~--~~~t~lFai~R~~GwiAH~~Eq~~~~~~ki~RPr~~Y~G~~~r~~~p~~~R~ 487 (513)
+||+|||||||+|++|++||||. ++||+||+++|++||+|||+||+.+| ++|+||+++|+|+.+|+|+|+++|+
T Consensus 310 ~k~l~pNVD~~sg~v~~~lGip~~~~~~t~lF~isR~~Gw~AH~~Eq~~~~-~~i~RP~~~Y~G~~~r~~~p~~~r~ 385 (385)
T 2ifc_A 310 SKGIYPNTDYFSGIVYMSIGFPLRNNIYTALFALSRVTGWQAHFIEYVEEQ-QRLIRPRAVYVGPAERKYVPIAERK 385 (385)
T ss_dssp GGTCCBCTTTTHHHHHHHHTCCSGGGHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCEEEECSCCCCCCCCGGGC-
T ss_pred hcCCCCChHHHHHHHHHHcCCCcchhhhhhHHHHhhcccHHHHHHHHHhcc-CCccCcccccCCCcCCCCCChhhcC
Confidence 99999999999999999999999 99999999999999999999999875 4999999999999999999999993
No 13
>2p2w_A Citrate synthase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; HET: FLC; 1.90A {Thermotoga maritima}
Probab=100.00 E-value=8.1e-112 Score=881.84 Aligned_cols=363 Identities=39% Similarity=0.651 Sum_probs=340.8
Q ss_pred cCCCcccceeeeeeeeEeCCCCeeEEcccCHHHHhhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHHHHHHHH
Q 010304 98 DPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDIIQ 177 (513)
Q Consensus 98 dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~i~eLa~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~~~i~ 177 (513)
.|||.||++|+|+||+|||++|+|+||||||+||+++++||||+||||+|+|||++|+++|+++|..++.+|+.+.++++
T Consensus 3 ~~Gl~g~~~~~T~Is~id~~~G~L~YRGy~i~dLa~~~~feeva~LLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~~~~ 82 (367)
T 2p2w_A 3 QKGLEGVKICESSICYLDGINGRLYYRGIPVEELAEKSTFEETAYFLWYGKLPTKSELEEFKRKMADYRELPAEALGILY 82 (367)
T ss_dssp CTTCTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCCCCHHHHHHHT
T ss_pred CCcCCCCeeeeeeCeEEECCCCEEEECCeeHHHHHcCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHccCCCHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCChhhHHHHHHHHhhccCCCCCCcccCCCcccchhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCCCCCCCHHH
Q 010304 178 AMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYSE 257 (513)
Q Consensus 178 ~~p~~~hPm~~l~a~v~al~~~~~~~~pa~~g~~~~~~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p~~~lsy~e 257 (513)
.||+++|||++|++++++|++|+++ + +...++++|||+++|+|+|++|+++.|+++++|++++||++
T Consensus 83 ~~p~~~hpM~~l~~~v~~l~~~~~~--~-----------~~~~~~a~~lia~~p~i~a~~y~~~~g~~~i~p~~~l~~a~ 149 (367)
T 2p2w_A 83 HLPKNLHYIDVLKIFLSIHGSMDGN--D-----------EDLREKAIRVASVFPTILAYYYRYSKGKELIRPRKDLSHVE 149 (367)
T ss_dssp TSCSCCCHHHHHHHHHSCC--------------------CHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHH
T ss_pred hCccCCChHHHHHHHHHHHhccCCC--h-----------HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCHHH
Confidence 9999999999999999999998765 1 12356799999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChHHHHHHHH
Q 010304 258 NFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKML 337 (513)
Q Consensus 258 NfL~ml~~~~~~~~~p~p~~~~~Ld~~LILhADHelN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAneav~~mL 337 (513)
|||+||++. + |..+++||++||||||||+||||||+|+++||++|+|+||+|||+|||||+||||||+|++||
T Consensus 150 nfl~ml~~~------~-~~~~~~ld~~LvL~ADHg~NaSTftaRvvaSt~ad~ysavaagi~aL~GPlHGGAne~v~~ml 222 (367)
T 2p2w_A 150 NFYYMMFGE------R-NEKIRLLESAFILLMEQDINASTFAALVIASTLSDLYSCIVGALGALKGPLHGGASEKVPPML 222 (367)
T ss_dssp HHHHHHHSC------C-CTTHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHH
T ss_pred HHHHHhcCC------C-hHHHHHHHHHHhHhccCCCchHHHHHHHHHhcCccHHHHHHHHHHHccCCccCChHHHHHHHH
Confidence 999999973 2 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCHHHHHHHHHhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhccccccccCCC
Q 010304 338 NEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLY 417 (513)
Q Consensus 338 ~eI~~~~~i~~~i~~~~~~~~rl~GFGHrVYk~~DPRA~iL~~~a~~l~~~~~~~~ll~iA~~lE~~a~~d~yf~~r~Ly 417 (513)
++|++++++++||++++++|++||||||||||++|||+++|+++|+++ .+.+++++++++||+++.+ || .||+|
T Consensus 223 ~ei~~~~~~~~~i~~~l~~~~~i~GfGHrVyk~~DPRa~~l~~~a~~~---~~~~~~~~~a~~le~~~~~--~~-~k~l~ 296 (367)
T 2p2w_A 223 EEIGSEDRVEEFVQKCLKEKRKIMGFGHRVYKTYDPRAVFLKRVLQEH---FPDSKLFRIASKLEEYIVS--NK-IKNIY 296 (367)
T ss_dssp HHHCSGGGHHHHHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHH--TT-GGGCC
T ss_pred HHhcCchhHHHHHHHHHHcCCccccCCccccCCCCCchHHHHHHHHHh---cCCcHHHHHHHHHHHHHHH--Hh-ccCCC
Confidence 999999999999999999999999999999999999999999999997 3567999999999999764 67 89999
Q ss_pred CchhhHHHHHHHHcCCCCCchhhHhhhhhhhhhHHHHHhhhcCCCCCccCCcccccCCCCccccccccccc
Q 010304 418 PNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKERMI 488 (513)
Q Consensus 418 PNVDfysg~i~~alGiP~~~~t~lFai~R~~GwiAH~~Eq~~~~~~ki~RPr~~Y~G~~~r~~~p~~~R~~ 488 (513)
||||||+|++|++||||+++||+||+++|++||+|||+||+.+ +||+|||++|+|+.+|+|+|+++|++
T Consensus 297 pNVDf~sg~v~~~lGip~~~~t~lFai~R~~Gw~AH~~Eq~~~--~~iiRP~~~Y~G~~~r~~~p~~~r~~ 365 (367)
T 2p2w_A 297 PNVDLYSSVLFEELGFPRNMFTALFATARVVGWTAHVIEYVSD--NKLIRPTSEYVGPMDVEYIPIERRDE 365 (367)
T ss_dssp BCHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCCCCCSCCSCCCCCGGGSCC
T ss_pred CChHHHHHHHHHHhCCChhhhhhHHHHhccccHHHHHHHHHhc--CCccCccccccCCCCCCCCChHhccc
Confidence 9999999999999999999999999999999999999999975 69999999999999999999999964
No 14
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=100.00 E-value=1.4e-110 Score=873.55 Aligned_cols=369 Identities=39% Similarity=0.666 Sum_probs=351.2
Q ss_pred CCCcccceeeeeeeeEeCCCCeeEEcccCHHHHhhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHHHHHHHHh
Q 010304 99 PGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDIIQA 178 (513)
Q Consensus 99 pG~~~t~~~~S~IT~Idg~~G~L~YRGy~i~eLa~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~~~i~~ 178 (513)
|||.||++|+|+||+|||++|+|+||||||+|||++++||||+||||+|+|||++|+++|+++|..++.+|+.+.++++.
T Consensus 3 ~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~~La~~~~fEeva~LLl~G~lP~~~el~~f~~~l~~~~~lp~~~~~~~~~ 82 (371)
T 1aj8_A 3 KGLEDVYIDQTNICYIDGKEGKLYYRGYSVEELAELSTFEEVVYLLWWGKLPSLSELENFKKELAKSRGLPKEVIEIMEA 82 (371)
T ss_dssp GGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred CCcCCCeeeeeeCeEEECCCCEEEEcCccHHHHHccCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhhHHHHHHHHhhccCCCCCCcccCCCcccchhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCCCCCCCHHHH
Q 010304 179 MPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYSEN 258 (513)
Q Consensus 179 ~p~~~hPm~~l~a~v~al~~~~~~~~pa~~g~~~~~~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p~~~lsy~eN 258 (513)
||+++|||++|++++++|++|+++.+. . .+.+...+++++||+|+|+|+|++|+++.|+++++|++++||++|
T Consensus 83 ~p~~~hpM~~l~~~v~~l~~~~~~~~~------~-~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls~~~n 155 (371)
T 1aj8_A 83 LPKNTHPMGALRTIISYLGNIDDSGDI------P-VTPEEVYRIGISVTAKIPTIVANWYRIKNGLEYVPPKEKLSHAAN 155 (371)
T ss_dssp SCTTCCHHHHHHHHHHHHHHHSTTTTS------C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHH
T ss_pred CCCCCChHHHHHHHHHHHhccCCcccc------c-CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCHHHH
Confidence 999999999999999999999876421 0 134556778999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChHHHHHHHHH
Q 010304 259 FLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLN 338 (513)
Q Consensus 259 fL~ml~~~~~~~~~p~p~~~~~Ld~~LILhADHelN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAneav~~mL~ 338 (513)
||+||++ .+|+|..+++||++||||||||+|+||||+|+++||++|+|+||+|||+|||||+||||||+|++||+
T Consensus 156 fl~ml~g-----~~p~~~~~~~ld~~Lvl~aDHg~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~~l~ 230 (371)
T 1aj8_A 156 FLYMLHG-----EEPPKEWEKAMDVALILYAEHEINASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAIKQFM 230 (371)
T ss_dssp HHHHHHS-----SCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHH
T ss_pred HHHHhcC-----CCCCHHHHHHHHHHHhHhcCCCCChhHHHHHHHhhcCCcHHHHHHHHHHHcCCCccCCchHHHHHHHH
Confidence 9999986 36899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCHHHHHHHHHhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhccccccccCCCC
Q 010304 339 EIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYP 418 (513)
Q Consensus 339 eI~~~~~i~~~i~~~~~~~~rl~GFGHrVYk~~DPRA~iL~~~a~~l~~~~~~~~ll~iA~~lE~~a~~d~yf~~r~LyP 418 (513)
+|++++++++||++.+++|++||||||||||++|||+++|+++|+++ +.+++++++++||+++.+ ||+.||+||
T Consensus 231 ~i~~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~~~~~----~~~~~~~~a~~le~~~~~--~~~~k~l~p 304 (371)
T 1aj8_A 231 EIGSPEKVEEWFFKALQQKRKIMGAGHRVYKTYDPRARIFKKYASKL----GDKKLFEIAERLERLVEE--YLSKKGISI 304 (371)
T ss_dssp HHCSGGGHHHHHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHH----SCHHHHHHHHHHHHHHHH--HTTTTTCCB
T ss_pred HhcCchhHHHHHHHHHHcCCeeecCCccccCCCCccHHHHHHHHHHc----CCCHHHHHHHHHHHHHHH--hccCCCCCC
Confidence 99999999999999999999999999999999999999999999987 567899999999999754 888999999
Q ss_pred chhhHHHHHHHHcCCCCCchhhHhhhhhhhhhHHHHHhhhcCCCCCccCCcccccCCCCcccccccccc
Q 010304 419 NVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKERM 487 (513)
Q Consensus 419 NVDfysg~i~~alGiP~~~~t~lFai~R~~GwiAH~~Eq~~~~~~ki~RPr~~Y~G~~~r~~~p~~~R~ 487 (513)
|||||+|++|++||||.++||+||+++|++||+|||+||+.+ ++|+||+++|+|+.+|+|+|+++|+
T Consensus 305 NVD~~sg~i~~~lGip~~~~t~lF~i~R~~Gw~AH~~Eq~~~--~~i~RP~~~Y~G~~~r~~~p~~~r~ 371 (371)
T 1aj8_A 305 NVDYWSGLVFYGMKIPIELYTTIFAMGRIAGWTAHLAEYVSH--NRIIRPRLQYVGEIGKKYLPIELRR 371 (371)
T ss_dssp CTTTTHHHHHHTTTCCGGGHHHHHHHHHHHHHHHHHHHHHTT--CCCCCCEEEECSCCCBCCCCGGGCC
T ss_pred ChHHHHHHHHHHcCCCHHhhhhHHHHhccccHHHHHHHHHhc--CCccCchhhccCCCCCCCCChhccC
Confidence 999999999999999999999999999999999999999975 5899999999999999999999993
No 15
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=100.00 E-value=6.3e-110 Score=866.07 Aligned_cols=359 Identities=36% Similarity=0.581 Sum_probs=342.8
Q ss_pred CCCcccceeeeeeeeEeCCCCeeEEcccCHHHHhhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHHHHHHHHh
Q 010304 99 PGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDIIQA 178 (513)
Q Consensus 99 pG~~~t~~~~S~IT~Idg~~G~L~YRGy~i~eLa~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~~~i~~ 178 (513)
|||.||++|+|+||+|||++|+|+||||||+||+++++||||+||||+|+|||++|+++|+++|..++.+|+.+.++++.
T Consensus 3 ~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~fEeva~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~~~~~~ 82 (363)
T 2c6x_A 3 YGLKGITCVETSISHIDGEKGRLIYRGHHAKDIALNHSFEEAAYLILFGKLPSTEELQVFKDKLAAERNLPEHIERLIQS 82 (363)
T ss_dssp GGGTTCCCEEESSEEEETTTTEEEETTEEHHHHHHHSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred CcCCCCeeeeeeCeEEECCCCEEEEcCccHHHHHccCCHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCCHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhhHHHHHHHHhhccCCCCCCcccCCCcccchhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCCCCCCCHHHH
Q 010304 179 MPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYSEN 258 (513)
Q Consensus 179 ~p~~~hPm~~l~a~v~al~~~~~~~~pa~~g~~~~~~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p~~~lsy~eN 258 (513)
||+++|||++|++++++|++ ++.+ .+...++++|||+|+|+|+|++|+++.|+++++|++++||++|
T Consensus 83 ~p~~~hpM~~l~~~v~~l~~--~~~~-----------~~~~~~~a~~Lia~~p~i~a~~~~~~~g~~~i~p~~~ls~a~n 149 (363)
T 2c6x_A 83 LPNNMDDMSVLRTVVSALGE--NTYT-----------FHPKTEEAIRLIAITPSIIAYRKRWTRGEQAIAPSSQYGHVEN 149 (363)
T ss_dssp SCSSSCHHHHHHHHHHHHCC--SSCC-----------SSCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCSHHH
T ss_pred CcccCCchHHHHHHHHhhcC--CCCC-----------hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCHHHH
Confidence 99999999999999999988 3321 1123567999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChHHHHHHHHH
Q 010304 259 FLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLN 338 (513)
Q Consensus 259 fL~ml~~~~~~~~~p~p~~~~~Ld~~LILhADHelN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAneav~~mL~ 338 (513)
||+|+++. +|+|..+++||++||||||||+|+||||+|+++||++|+|+||+|||+|||||+||||||+|++||+
T Consensus 150 fl~ml~g~-----~p~~~~~~~ld~~Lvl~aDHg~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~~l~ 224 (363)
T 2c6x_A 150 YYYMLTGE-----QPSEAKKKALETYMILATEHGMNASTFSARVTLSTESDLVSAVTAALGTMKGPLHGGAPSAVTKMLE 224 (363)
T ss_dssp HHHHHHSS-----CCCHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred HHHHHcCC-----CCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHHhcCccHHHHHHHHHHHcccCccCCchHHHHHHHH
Confidence 99999973 5899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCHHHHHHHHHhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc--ccccccCC
Q 010304 339 EIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSD--EYFVKRKL 416 (513)
Q Consensus 339 eI~~~~~i~~~i~~~~~~~~rl~GFGHrVYk~~DPRA~iL~~~a~~l~~~~~~~~ll~iA~~lE~~a~~d--~yf~~r~L 416 (513)
+|++++++++||++.+++|++||||||||||++|||+++|+++|++++ +.+++++++++||+++.++ +||+.||+
T Consensus 225 ~i~~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~~~---~~~~~~~~a~~le~~~~~~~g~yf~~k~l 301 (363)
T 2c6x_A 225 DIGEKEHAEAYLKEKLEKGERLMGFGHRVYKTKDPRAEALRQKAEEVA---GNDRDLDLALHVEAEAIRLLEIYKPGRKL 301 (363)
T ss_dssp TCCSSTTHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHTT---TSCHHHHHHHHHHHHHHHHHHHHSCSSCC
T ss_pred HhCChhhHHHHHHHHHHcCCcccCCCCcccCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHHhhccccccCCC
Confidence 999999999999999999999999999999999999999999999975 5789999999999999998 99999999
Q ss_pred CCchhhHHHHHHHHcCCCCCchhhHhhhhhhhhhHHHHHhhhcCCCCCccCCcccccCCCCccc
Q 010304 417 YPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHY 480 (513)
Q Consensus 417 yPNVDfysg~i~~alGiP~~~~t~lFai~R~~GwiAH~~Eq~~~~~~ki~RPr~~Y~G~~~r~~ 480 (513)
|||||||+|++|++||||.++||+||+++|++||+|||+||+.+ +||+|||++|+|+.+|++
T Consensus 302 ~pNVD~~sg~i~~~lG~p~~~~t~lF~i~R~~Gw~AH~~Eq~~~--~~i~RP~~~Y~G~~~r~~ 363 (363)
T 2c6x_A 302 YTNVEFYAAAVMRAIDFDDELFTPTFSASRMVGWCAHVLEQAEN--NMIFRPSAQYTGAIPEEV 363 (363)
T ss_dssp CBCTHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHTTT--CCCCCCEEEECSCCCCCC
T ss_pred CcChHHHHHHHHHHhCCChhhhhhhhHHhccccHHHHHHHHHHc--CCccCCccccCCCCCCCC
Confidence 99999999999999999999999999999999999999999986 499999999999988864
No 16
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=100.00 E-value=1.1e-108 Score=861.94 Aligned_cols=365 Identities=34% Similarity=0.548 Sum_probs=347.7
Q ss_pred ecCCCcccceeeeeeeeEeCCCCeeEEcccCHHHHhhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCcHHHHHHH
Q 010304 97 YDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDII 176 (513)
Q Consensus 97 ~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~i~eLa~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~l~~~v~~~i 176 (513)
|||||.||++|+|+||+|||++|+|+||||||+||+++++||||+||||+|+|||++|+++|+++|..++.+|+.+.+++
T Consensus 5 ~~~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~fEeva~LLl~G~lP~~~el~~f~~~l~~~~~lp~~~~~~~ 84 (378)
T 1a59_A 5 IHKGLAGVTADVTAISKVNSDTNSLLYRGYPVQELAAKCSFEQVAYLLWNSELPNDSELKAFVNFERSHRKLDENVKGAI 84 (378)
T ss_dssp CCGGGTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTSCSCCHHHHHHH
T ss_pred CCCccCCCeeeeeeceEEECCCCeEEEcCccHHHHHhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCChhhHHHHHHHHhhccCCCCCCcccCCCcccchhHhHHHHHHHHhhhHHHHHHHHHHHcCCCCCCCCCCCCHH
Q 010304 177 QAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYS 256 (513)
Q Consensus 177 ~~~p~~~hPm~~l~a~v~al~~~~~~~~pa~~g~~~~~~~~~~~~~~~rliak~ptiaA~~y~~~~G~~~~~p~~~lsy~ 256 (513)
+.||+++|||++|++++++|++|+++.. +. +.+...+++++||+|+|+|+|++|+++.|+++++|++++||+
T Consensus 85 ~~~p~~~hpM~~l~~~v~~l~~~~~~~~------~~--~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls~a 156 (378)
T 1a59_A 85 DLLSTACHPMDVARTAVSVLGANHARAQ------DS--SPEANLEKAMSLLATFPSVVAYDQRRRRGEELIEPREDLDYS 156 (378)
T ss_dssp TTSCTTSCHHHHHHHHHHHHHHTCTTTT------CC--SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHH
T ss_pred HhCCCCCCcHHHHHHHHHHHHhcCCCcc------CC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCHH
Confidence 9999999999999999999999987642 11 345557789999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhHHHHHHhccCCCHHHHHHHHhhcccCCccCChHHHHHHH
Q 010304 257 ENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKM 336 (513)
Q Consensus 257 eNfL~ml~~~~~~~~~p~p~~~~~Ld~~LILhADHelN~ST~aaRvvaStgadlyaavaagi~AL~GPlHGGAneav~~m 336 (513)
+|||+||++ .+|+|..+++||++||||||||+|+||||+|+++||++|+|+||+|||+|||||+||||||+|++|
T Consensus 157 ~nfl~ml~g-----~~p~~~~~~~ld~~Lvl~ADHg~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~~ 231 (378)
T 1a59_A 157 ANFLWMTFG-----EEAAPEVVEAFNVSMILYAEHSFNASTFTARVITSTLADLHSAVTGAIGALKGPLHGGANEAVMHT 231 (378)
T ss_dssp HHHHHHHHS-----SCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHH
T ss_pred HHHHHHhcC-----CCCCHHHHHHHHHHHHHhcCCCCCchHHHHHHHhhcCCcHHHHHHHHHHHccCCccCCchHHHHHH
Confidence 999999987 368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCC---------CCHHHHHHHHHhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhc
Q 010304 337 LNEIGTV---------ENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALS 407 (513)
Q Consensus 337 L~eI~~~---------~~i~~~i~~~~~~~~rl~GFGHrVYk~~DPRA~iL~~~a~~l~~~~~~~~ll~iA~~lE~~a~~ 407 (513)
|++|++. +++++||++.+++|++||||||||||++|||+++|+++|++++++.+.+++++++++||+++.+
T Consensus 232 l~~i~~~~~~~~~~~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~~~~~~~~~~~~~~a~~le~~~~~ 311 (378)
T 1a59_A 232 FEEIGIRKDESLDEAATRSKAWMVDALAQKKKVMGFGHRVYKNGDSRVPTMKSALDAMIKHYDRPEMLGLYNGLEAAMEE 311 (378)
T ss_dssp HHHSCCCSSCCHHHHHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCTTHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCccccchHHHHHHHHHHHHhCCCeeeCCCCcccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 9999987 6799999999999999999999999999999999999999998877888999999999999876
Q ss_pred cccccccCCCCchhhHHHHHHHHcCCCCCchhhHhhhhhhhhhHHHHHhhhcCCCCCccCCcccccCCCCcccc
Q 010304 408 DEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYM 481 (513)
Q Consensus 408 d~yf~~r~LyPNVDfysg~i~~alGiP~~~~t~lFai~R~~GwiAH~~Eq~~~~~~ki~RPr~~Y~G~~~r~~~ 481 (513)
+ ||+|||||||+|++|++||||+++||+||+++|++||+|||+||+.+ ++|+||+++|+|+.+|+|+
T Consensus 312 ~-----k~l~pNVD~~sg~i~~~lGip~~~~t~lF~isR~~Gw~AH~~Eq~~~--~~i~RP~~~Y~G~~~r~~~ 378 (378)
T 1a59_A 312 A-----KQIKPNLDYPAGPTYNLMGFDTEMFTPLFIAARITGWTAHIMEQVAD--NALIRPLSEYNGPEQRQVP 378 (378)
T ss_dssp H-----HCCCBCTHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHT--CCCCCCCCCCCSCCCCCCC
T ss_pred H-----hCCCCChHHHHHHHHHHhCCChhhcchhhhhhcchhHHHHHHHHHhc--CCCcCchhhccCCCCCCCC
Confidence 3 89999999999999999999999999999999999999999999986 5899999999999999985
No 17
>1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B
Probab=100.00 E-value=9.4e-105 Score=843.78 Aligned_cols=385 Identities=26% Similarity=0.396 Sum_probs=343.3
Q ss_pred hhhhhhhcCC--CCcceeeecC---CCcccceeeeeeeeEeCCCCeeEEcccCHHHHhhcC---------CHHHHHHHHH
Q 010304 80 TDFKKITTGK--NDKGLKLYDP---GYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESS---------SFLEVAYLLM 145 (513)
Q Consensus 80 ~di~~l~~~~--~~~g~~~~dp---G~~~t~~~~S~IT~Idg~~G~L~YRGy~i~eLa~~~---------sFeEva~LL~ 145 (513)
..+++|++.. ..-|.+++|+ ||.||++|+|+||+|||++| |+||||||+||++++ +||||+||||
T Consensus 17 ~~~~~~~~~~g~~~~~~~t~~~~~~Gl~g~~~~~t~Is~id~~~G-l~YRGy~I~dLa~~~~~~~~~~~~~feev~yLLl 95 (435)
T 1csh_A 17 ARIKTFRQQHGNTAVGQITVDMSYGGMRGMKGLIYETSVLDPDEG-IRFRGFSIPECQKLLPKAGGGEEPLPEGLFWLLV 95 (435)
T ss_dssp HHHHHHHHHHTTCCCCCCCHHHHHTTTTTCCCCCCCSEEEETTTE-EEETTEEHHHHHHHSCBCTTCCSBCHHHHHHHHH
T ss_pred HHHHHHHHHcCCcccccccccccccCcCCCeeeeeeeeEEcCCCC-eeECCccHHHHHhhCcccccCCcCCHHHHHHHHH
Confidence 4566776422 2348899998 99999999999999999998 799999999999986 6999999999
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCcHHHHHHHHhCCCCCChhhHHHHHHHHhhccCCCCCCcccCCCcccchhHhHHHHHH
Q 010304 146 YGNLPSESQLTDWEFAVSQHSAVPQGILDIIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIAR 225 (513)
Q Consensus 146 ~G~LPt~~el~~f~~~l~~~~~l~~~v~~~i~~~p~~~hPm~~l~a~v~al~~~~~~~~pa~~g~~~~~~~~~~~~~~~r 225 (513)
+|+|||++|+++|++.|..++.+|+.+.++|+.||+++|||++|++++++|+++++.......+.+.....+...++++|
T Consensus 96 ~G~LPt~~el~~f~~~l~~~~~lp~~v~~~i~~~p~~~hPM~~l~~~v~aL~~~~~f~~~~~~~~~~~~~~~~~~~~a~~ 175 (435)
T 1csh_A 96 TGQIPTPEQVSWVSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGINRTKYWEFVYEDAMD 175 (435)
T ss_dssp HSSCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHSCTTSCHHHHHHHHHHHGGGGCHHHHHHHTTCCGGGHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHhCCccCChHHHHHHHHHHHhhcccccccccccCCccccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999742110000001100112455778999
Q ss_pred HHhhhHHHHHHHHHHHcCC--CCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhcCC-CCChhhHHHHH
Q 010304 226 ILGKAPTIAAAAYLRMAGR--PPVLPSNNLSYSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEH-EMNCSTSAARH 302 (513)
Q Consensus 226 liak~ptiaA~~y~~~~G~--~~~~p~~~lsy~eNfL~ml~~~~~~~~~p~p~~~~~Ld~~LILhADH-elN~ST~aaRv 302 (513)
||||+|+|+|++|+++.|. ++++|++++||++|||+||++ |+|..+++||++||||||| |+||||||+|+
T Consensus 176 LiAk~p~iaa~~yr~~~~~~~~~i~p~~~ls~a~nfl~ml~~-------p~~~~~~~ld~~LiLhADHeg~N~STftaRv 248 (435)
T 1csh_A 176 LIAKLPCVAAKIYRNLYRAGSSIGAIDSKLDWSHNFTNMLGY-------TDPQFTELMRLYLTIHSDHEGGNVSAHTSHL 248 (435)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCCCCCCCTTSCHHHHHHHHHTC-------CCHHHHHHHHHHHHHTSCCCSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCccCCCCCCCHHHHHHHHhcC-------CChHHHHHHHHHHHHccCCCCCchHHHHHHH
Confidence 9999999999999999876 688999999999999999974 7999999999999999999 69999999999
Q ss_pred HhccCCCHHHHHHHHhhcccCCccCChHHHHHHHHH----HhC---CCCCHHHHHHHHHhcCCcccccCCCCCCCCCchH
Q 010304 303 LASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLN----EIG---TVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRA 375 (513)
Q Consensus 303 vaStgadlyaavaagi~AL~GPlHGGAneav~~mL~----eI~---~~~~i~~~i~~~~~~~~rl~GFGHrVYk~~DPRA 375 (513)
++||++|+|+||+|||++||||+||||||+|++||+ +|+ +++++++||++++++|++||||||||||++|||+
T Consensus 249 vaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~~i~~~ig~~~~~~~~~~~v~~~l~~g~~i~GfGHrVyk~~DPRa 328 (435)
T 1csh_A 249 VGSALSDPYLSFAAAMNGLAGPLHGLANQEVLLWLSQLQKDLGADASDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRY 328 (435)
T ss_dssp HHTTTCCHHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHTTCCCTTBCCSSCCSCCHHH
T ss_pred HHhcCCCHHHHHHHHHHhccCCcccChHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCceecCCccccCCCCCcH
Confidence 999999999999999999999999999999999996 456 3578999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhc--cccccccCCCCchhhHHHHHHHHcCC-CCCchhhHhhhhhhhhhHH
Q 010304 376 KVIRKLAEEVFSIVGRDPLIEVAVALEKAALS--DEYFVKRKLYPNVDFYSGLIYRAMGF-PTEFFPVLFAIPRMAGYLA 452 (513)
Q Consensus 376 ~iL~~~a~~l~~~~~~~~ll~iA~~lE~~a~~--d~yf~~r~LyPNVDfysg~i~~alGi-P~~~~t~lFai~R~~GwiA 452 (513)
++|+++|+++ .+.+|+++++.+||+++.+ +++|+.|++|||||||+|++|++||| |.+|||+||+++|++||+|
T Consensus 329 ~~L~~~a~~l---~~~~~~~~~a~~le~~a~~~l~~~~~~k~l~pNVDf~sg~i~~~lGipp~~~ft~lFaisR~~Gw~A 405 (435)
T 1csh_A 329 TCQREFALKH---LPSDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLA 405 (435)
T ss_dssp HHHHHHHHHH---CTTCHHHHHHHHHHHHHHHHHHHHTCCSCCSBCTHHHHHHHHHHTTCCCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHcCCChhhcccchhhhhhhHHHHH
Confidence 9999999998 3678999999999999854 55799999999999999999999999 6999999999999999999
Q ss_pred HHHhhhcCCCCCccCCcccccCCC
Q 010304 453 HWRESLDDPDTKIMRPQQVYTGVW 476 (513)
Q Consensus 453 H~~Eq~~~~~~ki~RPr~~Y~G~~ 476 (513)
||+||+.++ .||+||||+|+|..
T Consensus 406 H~~Eq~~~~-~~I~RP~~~y~~~~ 428 (435)
T 1csh_A 406 QLIWSRALG-FPLERPKSMSTAGL 428 (435)
T ss_dssp HHHHHHHTT-CCCCCCCCCCHHHH
T ss_pred HHHHHHhcC-CCCcCcHHHhhHHH
Confidence 999999874 57999999999853
No 18
>3u5c_P 40S ribosomal protein S15; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_R 3o30_I 3o2z_I 3u5g_P 1s1h_S 3jyv_S*
Probab=48.36 E-value=6.9 Score=35.12 Aligned_cols=24 Identities=33% Similarity=0.390 Sum_probs=20.9
Q ss_pred eeEEcccCHHHHhhcCCHHHHHHHH
Q 010304 120 ILRYRGYPIEELAESSSFLEVAYLL 144 (513)
Q Consensus 120 ~L~YRGy~i~eLa~~~sFeEva~LL 144 (513)
...|||++++||-+ .+++|.+-|+
T Consensus 14 kFtyrG~~ld~Ll~-ms~e~l~~L~ 37 (142)
T 3u5c_P 14 THSYRGVDLEKLLE-MSTEDFVKLA 37 (142)
T ss_dssp CCBSSSCBHHHHHT-TCHHHHHHHS
T ss_pred eEEEccccHHHHHc-CCHHHHHHHh
Confidence 36899999999997 5899988887
No 19
>2xzm_S RPS15E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_S 3j0o_S 3j0l_S 3j0p_S 3j0q_S
Probab=47.33 E-value=5.8 Score=35.74 Aligned_cols=25 Identities=32% Similarity=0.375 Sum_probs=20.0
Q ss_pred eeEEcccCHHHHhh--------cCCHHHHHHHH
Q 010304 120 ILRYRGYPIEELAE--------SSSFLEVAYLL 144 (513)
Q Consensus 120 ~L~YRGy~i~eLa~--------~~sFeEva~LL 144 (513)
.-.|||++++||.+ ..+++|.+-|+
T Consensus 10 kftyrG~~l~~L~~~~~~~~~~~m~~~~~~~l~ 42 (144)
T 2xzm_S 10 KFTFRGKGLEELTALASGSNSEKLISDELAALF 42 (144)
T ss_dssp -CCCCTTCHHHHHHHHSSTTCCSSSCHHHHHHS
T ss_pred eeeecCCcHHHHHhhhcccccccCCHHHHHHHh
Confidence 36899999999998 35788888776
No 20
>3j20_T 30S ribosomal protein S19P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=43.15 E-value=6.9 Score=34.75 Aligned_cols=24 Identities=46% Similarity=0.768 Sum_probs=20.2
Q ss_pred eeEEcccCHHHHhhcCCHHHHHHHH
Q 010304 120 ILRYRGYPIEELAESSSFLEVAYLL 144 (513)
Q Consensus 120 ~L~YRGy~i~eLa~~~sFeEva~LL 144 (513)
...|||++++||-+. +++|.+-|+
T Consensus 5 kftyrG~~ld~L~~m-s~~~l~~L~ 28 (132)
T 3j20_T 5 EFRYRGYTLEQLMNM-SLEELARLF 28 (132)
T ss_dssp -CCSSSSCHHHHHHH-HHHHHHHHS
T ss_pred EEEEcCCcHHHHHcC-CHHHHHHHh
Confidence 467999999999975 799988886
No 21
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=38.75 E-value=64 Score=33.31 Aligned_cols=63 Identities=16% Similarity=0.165 Sum_probs=43.9
Q ss_pred hcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCC--CcHH--HHHHHHhCCCCCChhhHHHHHHHHhh
Q 010304 133 ESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQG--ILDIIQAMPHDAHPMGVLVSAMSALS 197 (513)
Q Consensus 133 ~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~--l~~~--v~~~i~~~p~~~hPm~~l~a~v~al~ 197 (513)
.+.+|-|..+++|.|+.|++.+.+.|..-|.-|.. +... ...++.+ ..++|-+.+.+++++|.
T Consensus 153 ~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aarv~aS--t~~d~~savaagi~aL~ 219 (385)
T 2ifc_A 153 PSDSYAESFLNAAFGRKATKEEIDAMNTALILYTDHEVPASTTAGLVAVS--TLSDMYSGITAALAALK 219 (385)
T ss_dssp CCSCHHHHHHHHHHTSCCCHHHHHHHHHHHHHTSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHhCCCCCHHHHHHHHHHHhHhcCCCccHHHHHHHHHHh--cCCcHHHHHHHHHHHcc
Confidence 45689999999999999999999888887744431 2322 2233333 34578888888888774
No 22
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=36.08 E-value=68 Score=32.99 Aligned_cols=63 Identities=11% Similarity=0.166 Sum_probs=44.6
Q ss_pred hcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCC--CcHH--HHHHHHhCCCCCChhhHHHHHHHHhh
Q 010304 133 ESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQG--ILDIIQAMPHDAHPMGVLVSAMSALS 197 (513)
Q Consensus 133 ~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~--l~~~--v~~~i~~~p~~~hPm~~l~a~v~al~ 197 (513)
.+.+|-|..+++|.|+.|++.+.+.|..-|.-|.. +... ...++.+ ..++|-..+.+++++|.
T Consensus 151 ~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aarv~aS--t~~d~~savaagi~aL~ 217 (378)
T 1a59_A 151 EDLDYSANFLWMTFGEEAAPEVVEAFNVSMILYAEHSFNASTFTARVITS--TLADLHSAVTGAIGALK 217 (378)
T ss_dssp TTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhcCCCCCchHHHHHHHhh--cCCcHHHHHHHHHHHcc
Confidence 45689999999999999999999888887644321 2322 2233333 34778888888888884
No 23
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=34.79 E-value=83 Score=32.38 Aligned_cols=63 Identities=17% Similarity=0.281 Sum_probs=44.0
Q ss_pred hcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCC--CcHH--HHHHHHhCCCCCChhhHHHHHHHHhh
Q 010304 133 ESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQG--ILDIIQAMPHDAHPMGVLVSAMSALS 197 (513)
Q Consensus 133 ~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~--l~~~--v~~~i~~~p~~~hPm~~l~a~v~al~ 197 (513)
.+.+|-|..+++|.|+.|++.+.+.|..-|.-|.. +... ...++.+ ..++|-+.+.+++++|.
T Consensus 149 ~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aS--t~~d~~savaagi~aL~ 215 (378)
T 1vgm_A 149 PSESYAESFLAATFGKKPTQEEIKAMDASLILYTDHEVPASTTAALVASS--TLSDMYSCIVAALAALK 215 (378)
T ss_dssp CCSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSCCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCchHHHHHHHHHh--cCCcHHHHHHHHHHhcc
Confidence 45689999999999999999999888887744431 2322 2233333 34678888888888774
No 24
>3iz6_R 40S ribosomal protein S15 (S19P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 2zkq_s
Probab=34.33 E-value=8.4 Score=34.99 Aligned_cols=24 Identities=25% Similarity=0.411 Sum_probs=0.0
Q ss_pred eeEEcccCHHHHhhcCCHHHHHHHH
Q 010304 120 ILRYRGYPIEELAESSSFLEVAYLL 144 (513)
Q Consensus 120 ~L~YRGy~i~eLa~~~sFeEva~LL 144 (513)
...|||++++||-+ .+++|.+-|+
T Consensus 23 kFtYrG~~ld~Ll~-ms~eel~~L~ 46 (154)
T 3iz6_R 23 KYSYRGVDLDALLD-MSTDDLVQLF 46 (154)
T ss_dssp -------------------------
T ss_pred eEEEecCcHHHHHh-CCHHHHHHHc
Confidence 46899999999997 5889988777
No 25
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=31.47 E-value=81 Score=32.37 Aligned_cols=63 Identities=17% Similarity=0.237 Sum_probs=44.3
Q ss_pred hcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCC--CcHH--HHHHHHhCCCCCChhhHHHHHHHHhh
Q 010304 133 ESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQG--ILDIIQAMPHDAHPMGVLVSAMSALS 197 (513)
Q Consensus 133 ~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~--l~~~--v~~~i~~~p~~~hPm~~l~a~v~al~ 197 (513)
.+.+|-|..+++|+|+.|++.+.+.|..-|.-|.. +... ...++.+ ..++|-+.+.+++++|.
T Consensus 145 ~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~ST~aaRv~aS--t~ad~~savaagi~aL~ 211 (373)
T 1vgp_A 145 PKLSHSENFLYMLYGDRPNEIKSKAMDVTLILHIDHEMNASTFASLVVAS--TFSDLYSSIVAGISALK 211 (373)
T ss_dssp TTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCchHHHHHHHHHh--cCccHHHHHHHHHHhcC
Confidence 44589999999999999999999888887754431 2222 2233333 34778888888888773
No 26
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=30.96 E-value=1.1e+02 Score=31.95 Aligned_cols=63 Identities=14% Similarity=0.252 Sum_probs=43.8
Q ss_pred hcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCC--CcHH--HHHHHHhCCCCCChhhHHHHHHHHhh
Q 010304 133 ESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQG--ILDIIQAMPHDAHPMGVLVSAMSALS 197 (513)
Q Consensus 133 ~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~--l~~~--v~~~i~~~p~~~hPm~~l~a~v~al~ 197 (513)
.+.+|-|..+++|.|+.|++.+.+.|..-|.-|.. +... ...++.+ ..++|-+.+.+++++|.
T Consensus 179 ~~ls~a~nfl~ml~g~~p~~~~~~~ld~~LvL~ADHg~naST~aaRv~aS--t~ad~~savaagi~aL~ 245 (409)
T 2ibp_A 179 DDLGHAANFLYMMFGREPDPLASRGIDLYLILHADHEVPASTFAAHVVAS--TLSDLYSSVAAAIAALK 245 (409)
T ss_dssp TTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSCCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcCCCCChhHHHHHHHhh--cCCcHHHHHHHHHHHcc
Confidence 34589999999999999999999888887744431 2322 2233333 34678888888887774
No 27
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=28.62 E-value=2e+02 Score=29.38 Aligned_cols=62 Identities=10% Similarity=0.113 Sum_probs=43.7
Q ss_pred cCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCC--CcHH--HHHHHHhCCCCCChhhHHHHHHHHhh
Q 010304 134 SSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQG--ILDIIQAMPHDAHPMGVLVSAMSALS 197 (513)
Q Consensus 134 ~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~--l~~~--v~~~i~~~p~~~hPm~~l~a~v~al~ 197 (513)
+.+|-|..+++|.|+.|++.+.+.|..-|.-|.. +... ...++.+ ..++|-+.+.+++++|.
T Consensus 149 ~ls~~~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg~n~St~aarv~aS--t~~d~~savaagi~aL~ 214 (371)
T 1aj8_A 149 KLSHAANFLYMLHGEEPPKEWEKAMDVALILYAEHEINASTLAVMTVGS--TLSDYYSAILAGIGALK 214 (371)
T ss_dssp TSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcCCCCCHHHHHHHHHHHhHhcCCCCChhHHHHHHHhh--cCCcHHHHHHHHHHHcC
Confidence 4589999999999999999999888877644321 2322 2233333 34778888888888874
No 28
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=28.44 E-value=2e+02 Score=29.45 Aligned_cols=63 Identities=16% Similarity=0.114 Sum_probs=44.4
Q ss_pred hcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCC--CcHH--HHHHHHhCCCCCChhhHHHHHHHHhh
Q 010304 133 ESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQG--ILDIIQAMPHDAHPMGVLVSAMSALS 197 (513)
Q Consensus 133 ~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~--l~~~--v~~~i~~~p~~~hPm~~l~a~v~al~ 197 (513)
.+.+|-|..+++|+|+.|++.+.+.|..-|.-|.. +... ...++.+ ..++|-+.+.+++++|.
T Consensus 149 ~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aS--t~~d~~savaagi~aL~ 215 (377)
T 1iom_A 149 EDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFS--TETDLYSAITAAVASLK 215 (377)
T ss_dssp TTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCCchHHHHHHHhh--cCCcHHHHHHHHHHHcc
Confidence 34589999999999999999999888887644331 2322 2233333 34778888888888874
No 29
>1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1
Probab=24.03 E-value=1.3e+02 Score=30.95 Aligned_cols=71 Identities=18% Similarity=0.204 Sum_probs=46.4
Q ss_pred ccCHHHHhhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcC--CCcHH--HHHHHHhCCCCCChhhHHHHHHHHhh
Q 010304 125 GYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHS--AVPQG--ILDIIQAMPHDAHPMGVLVSAMSALS 197 (513)
Q Consensus 125 Gy~i~eLa~~~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~--~l~~~--v~~~i~~~p~~~hPm~~l~a~v~al~ 197 (513)
|.+..+.-.+.+|-|...++|.|+.|++.+.+.|..-|.-|. .+... ...++.+ ..++|-+.+.+++++|.
T Consensus 140 g~~~i~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aS--t~ad~~savaagi~aL~ 214 (377)
T 1o7x_A 140 GNKPRIPEPSDSFAKSFLLASFAREPTTDEINAMDKALILYTDHEVPASTTAALVAAS--TLSDMYSSLTAALAALK 214 (377)
T ss_dssp TCCCCCCCCCSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSCCHHHHHHHHHHH--TTCCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCChHHHHHHHHHh--cCCcHHHHHHHHHHhcC
Confidence 444333223458999999999999999999888888764432 12322 2234443 23578888888888774
No 30
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=20.72 E-value=2.1e+02 Score=29.34 Aligned_cols=61 Identities=8% Similarity=0.044 Sum_probs=43.3
Q ss_pred CCHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCC--CcH--HHHHHHHhCCCCCChhhHHHHHHHHhh
Q 010304 135 SSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQ--GILDIIQAMPHDAHPMGVLVSAMSALS 197 (513)
Q Consensus 135 ~sFeEva~LL~~G~LPt~~el~~f~~~l~~~~~--l~~--~v~~~i~~~p~~~hPm~~l~a~v~al~ 197 (513)
.+|-|..+++|+|+.|++.+.+.+..-|.-|.. ... ....++.+ ..++|-..+.+++++|.
T Consensus 153 ls~a~nfl~ml~g~~p~~~~~~~ld~~Lil~ADHe~n~St~tarvvaS--t~ad~ysavaagi~aL~ 217 (375)
T 3tqg_A 153 LTLAGYFLHLLLGKKAAQMAIDCMNASLILYAEHEFNASTFAARVCSA--TLSDIYSAVTAAIATLR 217 (375)
T ss_dssp SSHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCCHHHHHHHHHHc--cCCCHHHHHHHHHHhcc
Confidence 589999999999999999999888887644421 222 22334443 34678888888888774
No 31
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=20.65 E-value=1.1e+02 Score=31.28 Aligned_cols=63 Identities=14% Similarity=0.256 Sum_probs=44.0
Q ss_pred hcCCHHHHHHHHHcCCCCCHHHHHHHHHHHh---hcCCCcHH--HHHHHHhCCCCCChhhHHHHHHHHhhc
Q 010304 133 ESSSFLEVAYLLMYGNLPSESQLTDWEFAVS---QHSAVPQG--ILDIIQAMPHDAHPMGVLVSAMSALSI 198 (513)
Q Consensus 133 ~~~sFeEva~LL~~G~LPt~~el~~f~~~l~---~~~~l~~~--v~~~i~~~p~~~hPm~~l~a~v~al~~ 198 (513)
.+.+|-|..+++|.|+.|++.+.+.|..-|. .|. +... ...++.+ ..++|-..+.+++++|..
T Consensus 142 ~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg-~n~St~aarv~aS--t~~d~~savaagi~aL~G 209 (363)
T 2c6x_A 142 SQYGHVENYYYMLTGEQPSEAKKKALETYMILATEHG-MNASTFSARVTLS--TESDLVSAVTAALGTMKG 209 (363)
T ss_dssp TTSCSHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCCS-SCHHHHHHHHHHT--TTCCHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHhccCC-CcHHHHHHHHHHh--cCccHHHHHHHHHHHccc
Confidence 3458999999999999999999888877663 332 2322 2233333 346788888888888743
No 32
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=20.41 E-value=1.4e+02 Score=25.86 Aligned_cols=87 Identities=14% Similarity=0.184 Sum_probs=42.9
Q ss_pred CHHHHHHHHHhcCCcccccCCCCCC-CCC----chHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH--hccccccccCCC
Q 010304 345 NIPEFIEGVKNRKRKMSGFGHRVYK-NYD----PRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAA--LSDEYFVKRKLY 417 (513)
Q Consensus 345 ~i~~~i~~~~~~~~rl~GFGHrVYk-~~D----PRA~iL~~~a~~l~~~~~~~~ll~iA~~lE~~a--~~d~yf~~r~Ly 417 (513)
++.++|+..++++.++.-++-.... ..+ .+...+-+..+++.++.+ -+++++...+.+.. ...+++..-+++
T Consensus 118 ~l~~~i~~~~~~~~~vil~~p~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~-~~~vD~~~~~~~~~~~~~~~~~~~Dg~H 196 (216)
T 3rjt_A 118 TLRHLVATTKPRVREMFLLSPFYLEPNRSDPMRKTVDAYIEAMRDVAASEH-VPFVDVQAEFDRLLAHLNTWVLAPDRVH 196 (216)
T ss_dssp HHHHHHHHHGGGSSEEEEECCCCCCCCTTSHHHHHHHHHHHHHHHHHHHHT-CCEECHHHHHHHHHTTSCHHHHCSSSSS
T ss_pred HHHHHHHHHHhcCCeEEEECCCcCCCCcchHHHHHHHHHHHHHHHHHHHcC-CeEEEcHHHHHHHHhcCCCcccccCCcC
Confidence 5677788877776665555422111 112 222233333344443333 23444444443321 123445566899
Q ss_pred CchhhHHHH---HHHHcC
Q 010304 418 PNVDFYSGL---IYRAMG 432 (513)
Q Consensus 418 PNVDfysg~---i~~alG 432 (513)
||-..|-.+ ++.+||
T Consensus 197 pn~~G~~~~a~~l~~~l~ 214 (216)
T 3rjt_A 197 PYLNGHLVIARAFLTAVG 214 (216)
T ss_dssp CCHHHHHHHHHHHHHHTT
T ss_pred CChHHHHHHHHHHHHHhc
Confidence 999887543 444454
Done!