Query 010305
Match_columns 513
No_of_seqs 427 out of 3780
Neff 8.2
Searched_HMMs 46136
Date Thu Mar 28 22:58:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010305.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010305hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK06833 L-fuculose phosphate 100.0 3.3E-44 7.1E-49 342.3 20.5 201 27-257 3-205 (214)
2 PRK08087 L-fuculose phosphate 100.0 3E-44 6.6E-49 342.5 20.1 203 25-258 1-205 (215)
3 PRK05874 L-fuculose-phosphate 100.0 1.3E-43 2.8E-48 337.3 21.7 198 28-254 5-205 (217)
4 PRK08193 araD L-ribulose-5-pho 100.0 7E-43 1.5E-47 336.3 21.4 204 27-255 2-217 (231)
5 PRK12348 sgaE L-ribulose-5-pho 100.0 6.5E-43 1.4E-47 335.6 20.9 202 28-255 2-214 (228)
6 TIGR00760 araD L-ribulose-5-ph 100.0 8.9E-43 1.9E-47 335.3 21.3 203 27-255 2-218 (231)
7 PRK13213 araD L-ribulose-5-pho 100.0 1.4E-42 3E-47 331.3 22.0 203 27-255 2-218 (231)
8 cd00398 Aldolase_II Class II A 100.0 5.3E-43 1.2E-47 333.4 19.1 200 29-256 2-205 (209)
9 PRK07490 hypothetical protein; 100.0 1E-42 2.2E-47 337.8 19.8 208 22-255 3-214 (245)
10 PRK05834 hypothetical protein; 100.0 1.9E-42 4.1E-47 323.4 20.9 186 27-242 3-192 (194)
11 PRK08130 putative aldolase; Va 100.0 1.1E-42 2.3E-47 331.8 19.5 203 25-257 1-207 (213)
12 PRK12347 sgbE L-ribulose-5-pho 100.0 2.1E-42 4.6E-47 332.1 21.7 203 27-255 2-218 (231)
13 PRK06557 L-ribulose-5-phosphat 100.0 1.6E-42 3.4E-47 332.7 20.6 203 27-256 8-212 (221)
14 PRK06754 mtnB methylthioribulo 100.0 3.4E-42 7.3E-47 326.5 22.2 204 26-244 3-206 (208)
15 PRK13145 araD L-ribulose-5-pho 100.0 3.8E-42 8.2E-47 331.0 21.2 205 26-255 2-218 (234)
16 PRK06755 hypothetical protein; 100.0 9.5E-42 2.1E-46 321.1 23.4 200 28-244 5-205 (209)
17 PRK06486 hypothetical protein; 100.0 2.7E-42 5.8E-47 337.2 19.5 209 22-257 19-232 (262)
18 TIGR01086 fucA L-fuculose phos 100.0 4.2E-42 9.2E-47 327.7 20.0 198 27-255 2-201 (214)
19 PRK09220 methylthioribulose-1- 100.0 2.3E-41 5E-46 319.9 23.2 201 25-242 1-203 (204)
20 PRK07090 class II aldolase/add 100.0 6E-42 1.3E-46 334.4 19.7 218 15-259 16-234 (260)
21 PRK06208 hypothetical protein; 100.0 1.3E-41 2.8E-46 332.7 19.2 207 26-260 39-249 (274)
22 PRK07044 aldolase II superfami 100.0 2E-41 4.3E-46 330.4 20.0 209 24-258 11-222 (252)
23 PRK06661 hypothetical protein; 100.0 2.3E-41 5.1E-46 325.2 19.7 196 29-251 2-202 (231)
24 PRK06357 hypothetical protein; 100.0 5.8E-41 1.2E-45 318.9 21.9 194 27-244 3-205 (216)
25 PRK08333 L-fuculose phosphate 100.0 6.1E-41 1.3E-45 312.6 21.3 179 28-238 2-183 (184)
26 TIGR03328 salvage_mtnB methylt 100.0 7.8E-41 1.7E-45 313.9 21.3 190 34-239 1-192 (193)
27 PRK08660 L-fuculose phosphate 100.0 2.7E-40 6E-45 307.4 20.8 180 30-241 1-180 (181)
28 COG0235 AraD Ribulose-5-phosph 100.0 3.1E-40 6.8E-45 315.3 17.6 194 24-245 2-199 (219)
29 TIGR02624 rhamnu_1P_ald rhamnu 100.0 4.3E-40 9.4E-45 321.7 18.9 212 28-258 7-260 (270)
30 PRK03634 rhamnulose-1-phosphat 100.0 3.6E-40 7.8E-45 323.9 18.3 213 26-257 5-261 (274)
31 PF00596 Aldolase_II: Class II 100.0 1.2E-38 2.6E-43 298.0 20.1 178 32-235 1-184 (184)
32 KOG2631 Class II aldolase/addu 100.0 1.1E-32 2.3E-37 247.0 21.4 210 21-243 11-226 (238)
33 TIGR01691 enolase-ppase 2,3-di 100.0 1.6E-31 3.5E-36 254.9 20.4 199 284-507 1-199 (220)
34 PLN02770 haloacid dehalogenase 99.9 2.3E-26 4.9E-31 225.2 19.4 105 400-508 106-212 (248)
35 PRK08324 short chain dehydroge 99.9 2.6E-27 5.7E-32 263.3 14.3 199 28-253 14-238 (681)
36 COG0546 Gph Predicted phosphat 99.9 3.1E-26 6.8E-31 220.2 19.1 105 400-508 87-193 (220)
37 PRK13226 phosphoglycolate phos 99.9 6.7E-26 1.5E-30 219.3 19.8 106 400-509 93-200 (229)
38 COG4229 Predicted enolase-phos 99.9 4.3E-26 9.4E-31 201.3 15.6 203 283-505 3-205 (229)
39 TIGR02632 RhaD_aldol-ADH rhamn 99.9 2E-26 4.3E-31 255.1 15.8 185 31-242 2-212 (676)
40 PRK13288 pyrophosphatase PpaX; 99.9 9.4E-26 2E-30 216.0 18.0 107 400-510 80-188 (214)
41 TIGR01422 phosphonatase phosph 99.9 4.4E-25 9.6E-30 216.9 19.0 105 400-508 97-205 (253)
42 TIGR01449 PGP_bact 2-phosphogl 99.9 6E-25 1.3E-29 210.0 17.9 107 400-510 83-191 (213)
43 TIGR02253 CTE7 HAD superfamily 99.9 1E-24 2.2E-29 209.6 19.3 106 400-509 92-200 (221)
44 PRK13478 phosphonoacetaldehyde 99.9 2.4E-24 5.1E-29 213.4 21.4 106 400-508 99-207 (267)
45 PLN03243 haloacid dehalogenase 99.9 1.3E-24 2.8E-29 213.6 18.5 105 400-509 107-213 (260)
46 PRK11587 putative phosphatase; 99.9 1.8E-24 3.9E-29 207.8 17.5 104 400-508 81-186 (218)
47 TIGR03351 PhnX-like phosphonat 99.9 2E-24 4.4E-29 207.6 17.7 108 400-510 85-197 (220)
48 PRK10826 2-deoxyglucose-6-phos 99.9 5.5E-24 1.2E-28 204.9 20.2 106 400-509 90-197 (222)
49 TIGR01454 AHBA_synth_RP 3-amin 99.9 2.4E-24 5.2E-29 204.8 17.2 107 400-510 73-181 (205)
50 PRK13223 phosphoglycolate phos 99.9 6.9E-24 1.5E-28 210.3 19.8 117 390-510 89-207 (272)
51 PLN02575 haloacid dehalogenase 99.9 3.4E-24 7.4E-29 218.1 17.9 105 400-508 214-320 (381)
52 COG0637 Predicted phosphatase/ 99.9 4.2E-24 9E-29 205.3 16.7 108 397-508 81-190 (221)
53 TIGR01428 HAD_type_II 2-haloal 99.9 9.2E-24 2E-28 199.7 18.8 103 400-506 90-194 (198)
54 PRK14988 GMP/IMP nucleotidase; 99.9 1.6E-23 3.5E-28 201.9 18.3 106 400-509 91-199 (224)
55 PRK13222 phosphoglycolate phos 99.9 1.9E-23 4.1E-28 201.4 18.7 107 400-510 91-199 (226)
56 PRK13225 phosphoglycolate phos 99.9 2.5E-23 5.4E-28 205.8 18.2 113 393-510 133-245 (273)
57 PLN02940 riboflavin kinase 99.9 3.5E-23 7.6E-28 214.3 18.0 106 400-509 91-199 (382)
58 TIGR01990 bPGM beta-phosphoglu 99.9 2.2E-23 4.8E-28 194.6 14.6 98 401-504 86-185 (185)
59 TIGR02252 DREG-2 REG-2-like, H 99.9 2.2E-22 4.7E-27 191.0 20.6 97 401-502 104-203 (203)
60 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 6.1E-23 1.3E-27 191.6 14.8 98 400-503 86-185 (185)
61 PRK10563 6-phosphogluconate ph 99.9 1.1E-22 2.3E-27 195.7 16.7 102 400-508 86-190 (221)
62 PRK09449 dUMP phosphatase; Pro 99.9 2.9E-22 6.2E-27 193.1 19.6 101 401-505 94-197 (224)
63 TIGR02254 YjjG/YfnB HAD superf 99.9 5.9E-22 1.3E-26 190.6 21.6 105 400-509 95-203 (224)
64 PRK10725 fructose-1-P/6-phosph 99.9 2.6E-22 5.5E-27 188.0 17.5 98 401-504 87-186 (188)
65 PLN02779 haloacid dehalogenase 99.9 2.3E-22 5E-27 200.7 17.3 109 401-510 143-252 (286)
66 PF13419 HAD_2: Haloacid dehal 99.9 7.7E-22 1.7E-26 181.2 17.2 100 400-503 75-176 (176)
67 PRK10748 flavin mononucleotide 99.9 7.4E-22 1.6E-26 192.2 17.8 99 400-508 111-212 (238)
68 TIGR01993 Pyr-5-nucltdase pyri 99.9 6.8E-22 1.5E-26 184.7 14.6 97 400-503 82-184 (184)
69 PRK06698 bifunctional 5'-methy 99.9 1E-21 2.2E-26 209.1 17.2 104 400-509 328-432 (459)
70 TIGR02247 HAD-1A3-hyp Epoxide 99.9 4.7E-22 1E-26 189.9 12.2 104 400-507 92-199 (211)
71 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 4E-21 8.7E-26 178.7 16.8 98 401-503 84-183 (183)
72 KOG2630 Enolase-phosphatase E- 99.9 4.4E-21 9.6E-26 176.2 16.3 221 281-505 5-225 (254)
73 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 8.4E-21 1.8E-25 179.4 18.6 90 402-496 106-197 (197)
74 PRK09456 ?-D-glucose-1-phospha 99.9 8.7E-21 1.9E-25 179.6 17.6 104 402-508 84-189 (199)
75 COG1011 Predicted hydrolase (H 99.9 1.8E-20 3.8E-25 180.9 19.0 103 400-507 97-202 (229)
76 PLN02919 haloacid dehalogenase 99.9 1.4E-20 3.1E-25 216.4 19.2 103 402-508 161-266 (1057)
77 PHA02597 30.2 hypothetical pro 99.8 1.7E-19 3.6E-24 170.5 15.7 100 401-508 73-178 (197)
78 PLN02811 hydrolase 99.8 1.5E-19 3.2E-24 173.9 14.5 106 400-509 76-189 (220)
79 TIGR00213 GmhB_yaeD D,D-heptos 99.8 1.4E-19 3E-24 167.9 13.1 102 402-509 26-156 (176)
80 PRK06769 hypothetical protein; 99.8 1.1E-19 2.4E-24 168.0 12.4 104 402-509 28-142 (173)
81 TIGR01493 HAD-SF-IA-v2 Haloaci 99.8 7.3E-20 1.6E-24 169.4 10.9 86 400-496 88-175 (175)
82 TIGR01656 Histidinol-ppas hist 99.8 1.1E-19 2.3E-24 163.7 10.9 101 402-506 27-147 (147)
83 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 6.7E-19 1.5E-23 159.4 15.2 91 400-497 62-154 (154)
84 PRK08942 D,D-heptose 1,7-bisph 99.8 4.6E-19 1E-23 165.2 14.1 102 402-509 29-152 (181)
85 KOG3085 Predicted hydrolase (H 99.8 1.1E-18 2.5E-23 165.5 16.4 104 400-508 111-217 (237)
86 TIGR01685 MDP-1 magnesium-depe 99.8 1.9E-19 4.1E-24 165.1 8.7 105 401-509 44-162 (174)
87 TIGR01662 HAD-SF-IIIA HAD-supe 99.8 1.1E-18 2.3E-23 154.1 11.5 96 402-504 25-131 (132)
88 TIGR01261 hisB_Nterm histidino 99.8 2.4E-18 5.1E-23 156.8 12.8 101 402-508 29-151 (161)
89 TIGR01672 AphA HAD superfamily 99.8 6.9E-18 1.5E-22 162.5 15.2 99 401-510 113-217 (237)
90 TIGR00338 serB phosphoserine p 99.8 5.4E-18 1.2E-22 162.8 13.9 96 401-500 84-191 (219)
91 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 1.4E-17 3E-22 157.4 14.9 103 401-507 79-193 (201)
92 KOG2914 Predicted haloacid-hal 99.7 3.1E-17 6.7E-22 155.3 15.1 107 396-505 86-197 (222)
93 TIGR01664 DNA-3'-Pase DNA 3'-p 99.7 1.7E-17 3.6E-22 152.1 11.2 94 403-502 43-160 (166)
94 TIGR01668 YqeG_hyp_ppase HAD s 99.7 3.3E-17 7.2E-22 151.0 13.0 99 402-511 43-143 (170)
95 COG3347 Uncharacterized conser 99.7 4E-17 8.6E-22 160.6 14.0 190 32-244 18-225 (404)
96 PLN02954 phosphoserine phospha 99.7 2.4E-16 5.2E-21 151.8 17.8 100 401-507 83-198 (224)
97 PRK09552 mtnX 2-hydroxy-3-keto 99.6 3.1E-15 6.7E-20 143.8 15.4 98 401-501 73-184 (219)
98 PRK11009 aphA acid phosphatase 99.6 1.8E-15 3.9E-20 145.7 13.7 100 400-510 112-217 (237)
99 KOG3109 Haloacid dehalogenase- 99.6 3.5E-15 7.6E-20 136.8 14.4 101 401-506 99-207 (244)
100 TIGR01452 PGP_euk phosphoglyco 99.6 1.1E-15 2.5E-20 152.2 9.5 103 403-510 144-253 (279)
101 PRK11133 serB phosphoserine ph 99.6 4E-15 8.7E-20 150.1 13.3 98 401-502 180-289 (322)
102 TIGR01489 DKMTPPase-SF 2,3-dik 99.6 8.3E-15 1.8E-19 136.8 13.7 93 401-500 71-185 (188)
103 cd01427 HAD_like Haloacid deha 99.6 5.3E-15 1.1E-19 129.5 11.6 98 402-503 24-139 (139)
104 PRK05446 imidazole glycerol-ph 99.6 6.5E-15 1.4E-19 149.5 13.8 98 402-505 30-149 (354)
105 PRK13582 thrH phosphoserine ph 99.6 3E-14 6.6E-19 135.2 15.4 95 401-500 67-167 (205)
106 TIGR01681 HAD-SF-IIIC HAD-supe 99.6 1.1E-14 2.4E-19 127.7 9.7 87 403-495 30-126 (128)
107 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.6 1E-14 2.2E-19 143.5 10.0 102 403-508 121-228 (257)
108 TIGR01670 YrbI-phosphatas 3-de 99.6 4.7E-15 1E-19 134.4 7.0 86 410-507 36-121 (154)
109 COG2179 Predicted hydrolase of 99.5 2.5E-14 5.3E-19 126.3 10.2 89 405-504 49-138 (175)
110 TIGR03333 salvage_mtnX 2-hydro 99.5 6.1E-14 1.3E-18 134.3 13.8 94 401-498 69-177 (214)
111 PF00702 Hydrolase: haloacid d 99.5 2E-13 4.4E-18 129.9 13.6 89 401-497 126-215 (215)
112 TIGR02726 phenyl_P_delta pheny 99.5 3.9E-14 8.3E-19 129.8 6.6 82 410-502 42-123 (169)
113 PHA02530 pseT polynucleotide k 99.5 9.7E-14 2.1E-18 139.8 10.1 102 402-506 187-298 (300)
114 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.5 1.6E-12 3.5E-17 123.0 17.1 98 401-502 86-196 (202)
115 TIGR01488 HAD-SF-IB Haloacid D 99.4 1.2E-12 2.7E-17 121.0 13.8 92 401-496 72-177 (177)
116 PRK09484 3-deoxy-D-manno-octul 99.4 2.2E-13 4.8E-18 127.1 8.2 84 409-504 55-138 (183)
117 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.4 1.2E-12 2.6E-17 128.2 12.4 53 457-510 176-229 (249)
118 KOG3699 Cytoskeletal protein A 99.4 3E-13 6.5E-18 140.3 7.4 150 77-246 87-239 (598)
119 TIGR01663 PNK-3'Pase polynucle 99.4 1.5E-12 3.3E-17 138.5 11.5 91 403-499 198-306 (526)
120 PLN02645 phosphoglycolate phos 99.4 1.8E-12 3.9E-17 131.1 11.0 98 408-510 176-281 (311)
121 TIGR01686 FkbH FkbH-like domai 99.4 2.3E-12 5E-17 130.9 11.6 91 402-499 31-125 (320)
122 PRK10444 UMP phosphatase; Prov 99.4 1.7E-12 3.6E-17 126.8 10.0 55 455-510 170-225 (248)
123 TIGR02137 HSK-PSP phosphoserin 99.4 1.4E-11 3.1E-16 116.6 14.9 95 401-503 67-170 (203)
124 smart00577 CPDc catalytic doma 99.3 1.4E-12 3.1E-17 117.4 6.4 92 401-500 44-138 (148)
125 COG0647 NagD Predicted sugar p 99.3 5.6E-12 1.2E-16 123.0 10.2 53 457-510 188-241 (269)
126 COG0241 HisB Histidinol phosph 99.3 1.2E-11 2.7E-16 113.0 11.4 102 402-509 31-154 (181)
127 PTZ00445 p36-lilke protein; Pr 99.2 2.9E-11 6.3E-16 112.0 9.7 98 403-504 76-205 (219)
128 COG0560 SerB Phosphoserine pho 99.2 2.5E-10 5.5E-15 108.7 16.0 97 401-501 76-184 (212)
129 PF12689 Acid_PPase: Acid Phos 99.2 6.9E-11 1.5E-15 107.7 9.1 101 401-508 44-155 (169)
130 PRK08238 hypothetical protein; 99.2 3.3E-10 7.1E-15 120.3 15.2 93 402-505 72-166 (479)
131 PF08645 PNK3P: Polynucleotide 99.2 5.8E-11 1.3E-15 107.9 7.5 93 403-501 30-153 (159)
132 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.2 2.6E-11 5.6E-16 118.4 5.1 98 404-505 140-242 (242)
133 TIGR01544 HAD-SF-IE haloacid d 99.2 1.2E-09 2.7E-14 107.0 16.5 93 400-496 119-230 (277)
134 PF13242 Hydrolase_like: HAD-h 99.1 1.3E-10 2.7E-15 92.0 6.2 53 457-510 2-55 (75)
135 PF09419 PGP_phosphatase: Mito 99.0 2.9E-09 6.3E-14 96.7 11.3 93 403-507 60-167 (168)
136 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.0 8.1E-10 1.8E-14 107.8 7.8 89 403-498 25-116 (242)
137 PRK11590 hypothetical protein; 99.0 4.5E-08 9.7E-13 93.5 18.3 104 390-501 86-200 (211)
138 PF06888 Put_Phosphatase: Puta 98.9 1.1E-08 2.4E-13 98.2 12.4 105 400-508 69-201 (234)
139 TIGR02244 HAD-IG-Ncltidse HAD 98.9 6.5E-09 1.4E-13 105.1 10.3 103 401-504 183-323 (343)
140 TIGR01533 lipo_e_P4 5'-nucleot 98.9 1.3E-08 2.8E-13 99.8 10.4 84 401-494 117-205 (266)
141 PF12710 HAD: haloacid dehalog 98.8 1.3E-07 2.7E-12 88.4 14.2 85 405-494 92-192 (192)
142 PRK10530 pyridoxal phosphate ( 98.8 3.7E-08 8E-13 97.6 11.1 99 402-507 137-242 (272)
143 KOG3040 Predicted sugar phosph 98.8 4.4E-08 9.5E-13 89.6 10.1 50 457-507 179-229 (262)
144 COG1778 Low specificity phosph 98.7 8.6E-09 1.9E-13 90.3 4.4 81 410-501 43-123 (170)
145 TIGR01684 viral_ppase viral ph 98.7 3.6E-08 7.8E-13 96.5 8.2 56 405-463 149-206 (301)
146 TIGR01545 YfhB_g-proteo haloac 98.7 1.7E-06 3.6E-11 82.5 18.7 96 401-501 93-199 (210)
147 TIGR01525 ATPase-IB_hvy heavy 98.6 1.3E-07 2.9E-12 103.3 9.7 91 401-507 383-474 (556)
148 TIGR02251 HIF-SF_euk Dullard-l 98.6 3.5E-08 7.5E-13 90.1 3.4 96 401-504 41-139 (162)
149 TIGR01460 HAD-SF-IIA Haloacid 98.6 5.4E-08 1.2E-12 94.6 4.7 92 410-506 137-236 (236)
150 KOG1615 Phosphoserine phosphat 98.5 2.2E-06 4.7E-11 78.0 14.1 90 400-495 86-191 (227)
151 TIGR01512 ATPase-IB2_Cd heavy 98.5 2E-07 4.4E-12 101.3 9.0 92 401-508 361-453 (536)
152 PRK01158 phosphoglycolate phos 98.5 2.2E-07 4.8E-12 89.7 7.3 82 420-506 117-201 (230)
153 PHA03398 viral phosphatase sup 98.4 7E-07 1.5E-11 87.6 9.1 80 405-487 151-262 (303)
154 TIGR01482 SPP-subfamily Sucros 98.4 2.6E-06 5.7E-11 81.8 11.4 80 421-505 110-192 (225)
155 PRK00192 mannosyl-3-phosphogly 98.4 4.5E-06 9.7E-11 83.0 13.3 90 411-509 141-238 (273)
156 KOG3120 Predicted haloacid deh 98.4 3.1E-06 6.6E-11 78.5 10.7 105 400-508 82-214 (256)
157 TIGR01511 ATPase-IB1_Cu copper 98.4 1.2E-06 2.5E-11 95.9 9.1 91 401-508 404-494 (562)
158 COG4996 Predicted phosphatase 98.3 1.5E-06 3.2E-11 73.8 6.8 82 401-488 40-127 (164)
159 KOG2882 p-Nitrophenyl phosphat 98.3 3.8E-07 8.2E-12 88.7 3.4 103 404-510 167-275 (306)
160 PRK10671 copA copper exporting 98.2 3E-06 6.4E-11 97.1 9.6 93 401-509 649-741 (834)
161 TIGR01487 SPP-like sucrose-pho 98.2 1.1E-05 2.3E-10 77.2 10.7 78 420-501 109-187 (215)
162 PF13344 Hydrolase_6: Haloacid 98.1 7.3E-06 1.6E-10 68.6 7.2 84 402-498 14-100 (101)
163 PF06941 NT5C: 5' nucleotidase 98.1 3E-06 6.4E-11 79.6 3.8 90 399-510 70-168 (191)
164 COG4359 Uncharacterized conser 98.1 5.9E-05 1.3E-09 68.1 11.7 90 401-497 72-179 (220)
165 TIGR02463 MPGP_rel mannosyl-3- 98.0 6.1E-05 1.3E-09 72.2 12.2 78 417-501 137-219 (221)
166 PF03767 Acid_phosphat_B: HAD 97.9 1.5E-05 3.2E-10 77.0 6.1 87 402-496 115-211 (229)
167 TIGR01456 CECR5 HAD-superfamil 97.9 1.4E-05 3.1E-10 81.2 5.5 51 456-506 230-293 (321)
168 TIGR01522 ATPase-IIA2_Ca golgi 97.9 3.6E-05 7.8E-10 88.7 9.3 99 402-507 528-644 (884)
169 smart00775 LNS2 LNS2 domain. T 97.9 0.00011 2.3E-09 66.8 10.0 95 403-500 28-142 (157)
170 TIGR01675 plant-AP plant acid 97.8 8.8E-05 1.9E-09 71.0 9.6 92 401-501 119-219 (229)
171 PF05761 5_nucleotid: 5' nucle 97.8 7.9E-05 1.7E-09 78.4 9.9 103 402-505 183-325 (448)
172 TIGR01485 SPP_plant-cyano sucr 97.8 0.00012 2.6E-09 71.7 10.2 54 453-507 160-213 (249)
173 PRK11033 zntA zinc/cadmium/mer 97.7 0.00017 3.7E-09 81.4 10.7 90 401-508 567-656 (741)
174 TIGR01680 Veg_Stor_Prot vegeta 97.6 0.00024 5.1E-09 69.3 9.1 97 401-501 144-246 (275)
175 PRK10976 putative hydrolase; P 97.5 0.00069 1.5E-08 66.8 11.3 48 457-506 187-234 (266)
176 PLN02645 phosphoglycolate phos 97.5 0.00074 1.6E-08 68.4 10.4 90 402-502 44-136 (311)
177 TIGR00099 Cof-subfamily Cof su 97.5 0.0006 1.3E-08 66.9 9.5 46 455-501 183-228 (256)
178 COG3700 AphA Acid phosphatase 97.4 0.00039 8.5E-09 62.5 6.6 93 402-505 114-212 (237)
179 KOG3699 Cytoskeletal protein A 97.4 7.7E-05 1.7E-09 78.6 2.6 174 44-243 364-540 (598)
180 TIGR02250 FCP1_euk FCP1-like p 97.4 0.00043 9.4E-09 62.7 6.8 79 401-490 57-140 (156)
181 TIGR01460 HAD-SF-IIA Haloacid 97.2 0.0013 2.8E-08 63.9 8.3 84 403-499 15-102 (236)
182 PRK15126 thiamin pyrimidine py 97.2 0.00067 1.4E-08 67.2 6.3 36 468-505 196-231 (272)
183 PF11019 DUF2608: Protein of u 97.2 0.014 3.1E-07 57.2 15.4 105 403-508 82-213 (252)
184 PLN02887 hydrolase family prot 97.2 0.0042 9E-08 67.9 12.5 52 453-506 500-551 (580)
185 PRK10513 sugar phosphate phosp 97.1 0.0011 2.4E-08 65.6 7.1 17 282-298 1-17 (270)
186 COG0561 Cof Predicted hydrolas 97.1 0.001 2.3E-08 65.5 6.3 38 463-501 192-229 (264)
187 COG4087 Soluble P-type ATPase 97.1 0.0042 9.1E-08 53.3 8.8 92 402-505 30-121 (152)
188 PRK12702 mannosyl-3-phosphogly 97.0 0.0014 3.1E-08 64.7 6.2 39 406-447 22-60 (302)
189 TIGR01116 ATPase-IIA1_Ca sarco 97.0 0.002 4.2E-08 74.8 8.2 98 402-506 537-656 (917)
190 TIGR02461 osmo_MPG_phos mannos 96.9 0.0018 3.9E-08 62.4 6.0 34 406-439 19-52 (225)
191 PRK03669 mannosyl-3-phosphogly 96.8 0.0022 4.8E-08 63.6 6.5 35 465-500 192-229 (271)
192 TIGR01456 CECR5 HAD-superfamil 96.8 0.004 8.7E-08 63.4 8.4 84 403-501 17-108 (321)
193 COG5663 Uncharacterized conser 96.7 0.016 3.4E-07 52.0 9.9 93 403-510 73-167 (194)
194 PTZ00174 phosphomannomutase; P 96.7 0.0037 8E-08 61.1 6.5 28 477-504 200-231 (247)
195 KOG2134 Polynucleotide kinase 96.7 0.0067 1.5E-07 61.3 8.2 94 402-501 104-230 (422)
196 TIGR01497 kdpB K+-transporting 96.5 0.0082 1.8E-07 66.6 8.2 87 402-501 446-532 (675)
197 COG2503 Predicted secreted aci 96.4 0.012 2.5E-07 56.0 7.5 88 401-493 121-209 (274)
198 KOG2470 Similar to IMP-GMP spe 96.3 0.007 1.5E-07 60.1 5.6 101 403-504 241-375 (510)
199 PF08282 Hydrolase_3: haloacid 96.3 0.0074 1.6E-07 58.1 5.9 37 463-500 189-225 (254)
200 PRK14010 potassium-transportin 96.2 0.015 3.3E-07 64.5 8.5 85 402-499 441-525 (673)
201 PLN02177 glycerol-3-phosphate 96.1 0.2 4.3E-06 54.0 16.3 88 403-499 111-210 (497)
202 TIGR01486 HAD-SF-IIB-MPGP mann 96.1 0.01 2.2E-07 58.3 5.9 35 466-501 182-218 (256)
203 PF05152 DUF705: Protein of un 96.1 0.022 4.7E-07 55.7 7.9 81 404-487 144-256 (297)
204 PRK14502 bifunctional mannosyl 96.1 0.012 2.6E-07 64.6 7.0 33 407-439 438-470 (694)
205 TIGR01689 EcbF-BcbF capsule bi 96.1 0.011 2.4E-07 51.4 5.2 29 403-431 25-53 (126)
206 COG2217 ZntA Cation transport 96.0 0.017 3.8E-07 64.4 8.0 85 402-499 537-621 (713)
207 PRK01122 potassium-transportin 96.0 0.019 4.2E-07 63.8 8.2 85 402-499 445-529 (679)
208 PLN02423 phosphomannomutase 95.9 0.045 9.8E-07 53.4 9.5 35 468-504 193-231 (245)
209 PF08235 LNS2: LNS2 (Lipin/Ned 95.8 0.08 1.7E-06 47.7 9.6 96 403-499 28-141 (157)
210 TIGR01647 ATPase-IIIA_H plasma 95.6 0.019 4.2E-07 65.2 6.3 94 402-499 442-556 (755)
211 TIGR02245 HAD_IIID1 HAD-superf 95.5 0.081 1.7E-06 49.6 9.0 88 403-499 46-151 (195)
212 COG3769 Predicted hydrolase (H 95.4 0.079 1.7E-06 49.8 8.4 97 404-508 136-238 (274)
213 TIGR01452 PGP_euk phosphoglyco 95.2 0.13 2.9E-06 51.1 10.2 87 402-500 18-107 (279)
214 TIGR01484 HAD-SF-IIB HAD-super 95.2 0.032 7E-07 52.5 5.5 44 457-501 160-203 (204)
215 KOG2882 p-Nitrophenyl phosphat 95.2 0.074 1.6E-06 52.4 7.9 38 402-439 38-75 (306)
216 PRK10517 magnesium-transportin 95.1 0.033 7.2E-07 64.4 6.0 92 402-499 550-659 (902)
217 TIGR01484 HAD-SF-IIB HAD-super 95.0 0.037 8E-07 52.1 5.3 12 287-298 2-13 (204)
218 TIGR01524 ATPase-IIIB_Mg magne 94.9 0.049 1.1E-06 62.9 6.8 93 402-500 515-625 (867)
219 PF03031 NIF: NLI interacting 94.8 0.019 4.2E-07 51.9 2.6 81 402-490 36-119 (159)
220 PRK15122 magnesium-transportin 94.7 0.045 9.7E-07 63.4 6.0 92 402-499 550-659 (903)
221 TIGR01517 ATPase-IIB_Ca plasma 94.7 0.055 1.2E-06 63.1 6.7 94 402-499 579-690 (941)
222 PRK10187 trehalose-6-phosphate 94.7 0.066 1.4E-06 53.0 6.2 41 465-506 179-222 (266)
223 TIGR00685 T6PP trehalose-phosp 94.4 0.054 1.2E-06 52.8 4.8 45 462-507 169-220 (244)
224 TIGR01523 ATPase-IID_K-Na pota 94.4 0.089 1.9E-06 61.9 7.3 95 402-500 646-768 (1053)
225 TIGR02471 sucr_syn_bact_C sucr 94.3 0.048 1E-06 52.7 4.3 52 453-506 152-203 (236)
226 TIGR01494 ATPase_P-type ATPase 94.1 0.21 4.5E-06 54.1 9.0 82 402-499 347-428 (499)
227 KOG0207 Cation transport ATPas 94.0 0.15 3.2E-06 57.2 7.6 85 402-499 723-807 (951)
228 KOG2961 Predicted hydrolase (H 93.8 0.49 1.1E-05 41.9 8.8 95 403-508 62-171 (190)
229 TIGR01106 ATPase-IIC_X-K sodiu 92.7 0.19 4.1E-06 59.0 6.3 95 402-500 568-706 (997)
230 COG5610 Predicted hydrolase (H 92.5 0.35 7.6E-06 50.1 7.0 98 402-503 97-201 (635)
231 TIGR02471 sucr_syn_bact_C sucr 92.0 0.2 4.4E-06 48.4 4.6 26 414-439 26-51 (236)
232 COG0474 MgtA Cation transport 91.8 0.62 1.3E-05 54.3 8.9 98 402-503 547-664 (917)
233 PF05822 UMPH-1: Pyrimidine 5' 91.5 2.2 4.7E-05 41.4 10.9 91 400-496 88-198 (246)
234 PLN02580 trehalose-phosphatase 91.5 0.35 7.5E-06 50.2 5.8 35 403-438 142-176 (384)
235 COG3882 FkbH Predicted enzyme 90.9 0.73 1.6E-05 48.4 7.3 88 402-498 255-348 (574)
236 PLN03017 trehalose-phosphatase 90.8 0.43 9.2E-06 49.1 5.7 17 480-496 305-321 (366)
237 KOG2469 IMP-GMP specific 5'-nu 90.7 0.52 1.1E-05 48.3 6.1 100 404-504 200-333 (424)
238 TIGR01657 P-ATPase-V P-type AT 90.5 0.69 1.5E-05 54.8 7.8 41 402-445 656-696 (1054)
239 PRK10444 UMP phosphatase; Prov 90.4 1.5 3.3E-05 42.8 9.0 51 402-452 17-67 (248)
240 PLN02151 trehalose-phosphatase 90.3 0.5 1.1E-05 48.4 5.6 14 285-298 99-112 (354)
241 PRK10513 sugar phosphate phosp 90.2 0.42 9.1E-06 47.0 5.0 48 457-506 193-240 (270)
242 PRK14501 putative bifunctional 89.6 0.6 1.3E-05 53.0 6.2 30 477-506 671-700 (726)
243 PLN02499 glycerol-3-phosphate 89.3 2.8 6E-05 44.8 10.3 28 410-438 101-128 (498)
244 TIGR01486 HAD-SF-IIB-MPGP mann 88.9 1 2.3E-05 43.9 6.6 13 287-299 2-14 (256)
245 COG1877 OtsB Trehalose-6-phosp 87.8 1.1 2.3E-05 44.2 5.7 18 282-299 16-33 (266)
246 COG4030 Uncharacterized protei 87.6 22 0.00048 33.9 13.8 38 401-439 82-119 (315)
247 TIGR02461 osmo_MPG_phos mannos 87.2 0.67 1.5E-05 44.5 3.9 43 456-501 179-223 (225)
248 KOG0202 Ca2+ transporting ATPa 87.1 1.7 3.7E-05 48.7 7.3 94 402-499 584-699 (972)
249 KOG3189 Phosphomannomutase [Li 87.0 1.4 3E-05 41.0 5.5 14 285-298 12-25 (252)
250 PLN02205 alpha,alpha-trehalose 86.9 1.1 2.4E-05 51.6 6.0 26 471-497 776-801 (854)
251 TIGR01458 HAD-SF-IIA-hyp3 HAD- 86.7 0.71 1.5E-05 45.4 3.9 48 402-452 21-71 (257)
252 TIGR01658 EYA-cons_domain eyes 86.7 3 6.5E-05 40.2 7.7 80 420-505 177-258 (274)
253 PF08282 Hydrolase_3: haloacid 86.4 0.86 1.9E-05 43.6 4.3 27 287-316 1-27 (254)
254 PRK15126 thiamin pyrimidine py 86.4 0.76 1.7E-05 45.3 4.0 16 283-298 1-16 (272)
255 PF06189 5-nucleotidase: 5'-nu 86.0 4.6 0.0001 39.3 8.8 78 418-509 186-263 (264)
256 PRK00192 mannosyl-3-phosphogly 84.1 1.4 3E-05 43.6 4.6 43 403-448 22-64 (273)
257 PRK03669 mannosyl-3-phosphogly 83.9 1.2 2.7E-05 43.9 4.1 19 280-298 3-21 (271)
258 TIGR01652 ATPase-Plipid phosph 82.1 2.5 5.5E-05 50.2 6.4 38 402-439 631-668 (1057)
259 PLN02382 probable sucrose-phos 81.3 2.5 5.3E-05 44.6 5.4 46 461-507 176-224 (413)
260 COG2216 KdpB High-affinity K+ 81.2 4.3 9.4E-05 43.2 6.9 85 402-499 447-531 (681)
261 COG0561 Cof Predicted hydrolas 80.6 1.5 3.2E-05 43.0 3.3 30 282-314 1-30 (264)
262 COG4850 Uncharacterized conser 79.7 8.7 0.00019 38.5 8.1 88 401-493 195-294 (373)
263 KOG1618 Predicted phosphatase 79.2 6.3 0.00014 39.4 6.9 85 403-502 52-144 (389)
264 cd04728 ThiG Thiazole synthase 78.9 28 0.0006 33.8 11.0 98 402-509 104-209 (248)
265 PF02358 Trehalose_PPase: Treh 78.6 2.2 4.7E-05 41.2 3.7 22 478-499 185-206 (235)
266 KOG3128 Uncharacterized conser 77.8 5.1 0.00011 38.8 5.6 92 402-496 138-247 (298)
267 TIGR02463 MPGP_rel mannosyl-3- 76.9 3.5 7.5E-05 39.1 4.5 38 405-445 19-56 (221)
268 PF05116 S6PP: Sucrose-6F-phos 75.2 3.2 6.9E-05 40.5 3.8 43 461-505 166-208 (247)
269 PF03031 NIF: NLI interacting 75.2 1.4 3E-05 39.6 1.2 16 285-300 1-16 (159)
270 TIGR00685 T6PP trehalose-phosp 74.7 2.7 5.8E-05 40.9 3.1 15 285-299 4-18 (244)
271 PLN03064 alpha,alpha-trehalose 74.4 6.1 0.00013 45.9 6.2 38 402-439 622-660 (934)
272 PRK10187 trehalose-6-phosphate 74.1 8.9 0.00019 37.8 6.7 14 285-298 15-28 (266)
273 PLN03063 alpha,alpha-trehalose 74.0 5.4 0.00012 45.8 5.8 36 403-438 533-569 (797)
274 KOG1618 Predicted phosphatase 74.0 2.5 5.5E-05 42.1 2.6 54 456-509 268-345 (389)
275 PRK00208 thiG thiazole synthas 73.9 40 0.00087 32.7 10.7 98 402-509 104-209 (250)
276 PLN03190 aminophospholipid tra 73.1 8.7 0.00019 46.1 7.3 36 402-437 726-761 (1178)
277 TIGR01487 SPP-like sucrose-pho 71.5 5.2 0.00011 37.8 4.2 40 403-445 19-58 (215)
278 PRK11840 bifunctional sulfur c 71.3 29 0.00063 35.1 9.4 98 402-509 178-283 (326)
279 TIGR00099 Cof-subfamily Cof su 70.3 6.8 0.00015 38.1 4.8 40 403-445 17-56 (256)
280 COG0731 Fe-S oxidoreductases [ 70.2 6.4 0.00014 39.3 4.6 37 401-437 91-128 (296)
281 PRK01158 phosphoglycolate phos 69.7 6.4 0.00014 37.4 4.5 41 403-446 21-61 (230)
282 KOG4549 Magnesium-dependent ph 69.1 22 0.00048 30.7 6.8 84 401-488 43-133 (144)
283 CHL00162 thiG thiamin biosynth 66.7 77 0.0017 31.0 10.8 95 402-509 118-223 (267)
284 TIGR01482 SPP-subfamily Sucros 65.9 8.6 0.00019 36.3 4.5 37 403-439 16-52 (225)
285 PRK10530 pyridoxal phosphate ( 65.2 9.7 0.00021 37.2 4.8 40 403-445 21-60 (272)
286 PRK10976 putative hydrolase; P 64.1 9.5 0.0002 37.3 4.5 41 403-446 20-60 (266)
287 PRK14502 bifunctional mannosyl 61.5 44 0.00096 37.4 9.3 44 458-502 611-656 (694)
288 PF05690 ThiG: Thiazole biosyn 59.5 1.1E+02 0.0024 29.5 10.4 92 402-506 104-206 (247)
289 KOG0204 Calcium transporting A 58.7 34 0.00074 38.9 7.8 94 402-499 647-760 (1034)
290 TIGR02329 propionate_PrpR prop 56.7 38 0.00083 36.9 7.9 86 406-506 85-172 (526)
291 PRK08324 short chain dehydroge 56.5 21 0.00046 40.3 6.1 52 198-249 345-396 (681)
292 PF14226 DIOX_N: non-haem diox 56.4 8.1 0.00018 32.4 2.2 36 174-212 1-39 (116)
293 COG0541 Ffh Signal recognition 55.7 86 0.0019 33.1 9.7 99 402-504 138-247 (451)
294 PRK00994 F420-dependent methyl 54.9 1.1E+02 0.0025 29.4 9.5 85 412-504 24-116 (277)
295 PF13580 SIS_2: SIS domain; PD 54.7 1.3E+02 0.0028 26.2 9.6 99 405-504 22-137 (138)
296 PRK15424 propionate catabolism 51.6 49 0.0011 36.2 7.6 87 406-506 95-182 (538)
297 PF06506 PrpR_N: Propionate ca 50.1 13 0.00029 34.0 2.6 87 406-509 65-155 (176)
298 KOG0780 Signal recognition par 48.9 1.3E+02 0.0029 31.3 9.6 98 402-504 139-248 (483)
299 TIGR02632 RhaD_aldol-ADH rhamn 48.8 30 0.00066 39.0 5.8 54 198-251 337-390 (676)
300 KOG0323 TFIIF-interacting CTD 48.0 23 0.0005 39.1 4.4 50 400-452 199-249 (635)
301 COG5083 SMP2 Uncharacterized p 46.3 15 0.00033 38.3 2.5 16 284-299 375-390 (580)
302 COG3347 Uncharacterized conser 45.8 74 0.0016 32.8 7.2 55 198-252 336-390 (404)
303 PF05116 S6PP: Sucrose-6F-phos 45.7 17 0.00036 35.4 2.7 14 284-297 2-15 (247)
304 KOG3107 Predicted haloacid deh 43.5 1.2E+02 0.0026 31.3 8.3 79 419-504 371-451 (468)
305 smart00577 CPDc catalytic doma 43.1 12 0.00027 33.1 1.3 15 285-299 3-17 (148)
306 PLN02334 ribulose-phosphate 3- 41.2 2.9E+02 0.0062 26.3 10.5 98 405-506 102-204 (229)
307 KOG0209 P-type ATPase [Inorgan 40.5 62 0.0013 36.8 6.2 40 400-439 673-712 (1160)
308 COG3769 Predicted hydrolase (H 39.6 41 0.00088 32.1 4.0 34 406-439 27-60 (274)
309 TIGR02251 HIF-SF_euk Dullard-l 39.2 17 0.00036 32.9 1.5 15 285-299 2-16 (162)
310 COG0761 lytB 4-Hydroxy-3-methy 39.0 1.5E+02 0.0032 29.5 8.0 91 403-510 169-270 (294)
311 TIGR03470 HpnH hopanoid biosyn 38.9 1.5E+02 0.0033 30.0 8.5 28 402-429 84-111 (318)
312 COG2022 ThiG Uncharacterized e 37.4 3.5E+02 0.0077 26.2 9.9 92 402-506 111-213 (262)
313 PF03332 PMM: Eukaryotic phosp 36.4 65 0.0014 30.8 4.9 42 407-452 1-42 (220)
314 PRK13762 tRNA-modifying enzyme 35.0 42 0.00091 34.1 3.8 29 402-430 142-170 (322)
315 PF03681 UPF0150: Uncharacteri 33.4 46 0.00099 23.2 2.7 24 202-225 15-39 (48)
316 TIGR01485 SPP_plant-cyano sucr 32.9 48 0.001 32.0 3.7 35 405-439 24-58 (249)
317 TIGR00262 trpA tryptophan synt 32.5 2.8E+02 0.0062 27.1 9.0 94 403-506 125-229 (256)
318 PLN02887 hydrolase family prot 31.7 67 0.0015 35.5 4.9 37 403-439 326-362 (580)
319 TIGR03151 enACPred_II putative 29.4 4.3E+02 0.0092 26.6 9.9 88 408-508 99-194 (307)
320 PF03332 PMM: Eukaryotic phosp 29.3 35 0.00076 32.5 1.9 57 10-80 107-164 (220)
321 PLN03176 flavanone-3-hydroxyla 29.1 73 0.0016 27.3 3.7 37 173-212 37-79 (120)
322 TIGR00236 wecB UDP-N-acetylglu 29.0 2.2E+02 0.0048 28.9 8.0 97 407-507 16-120 (365)
323 COG1663 LpxK Tetraacyldisaccha 28.5 1.3E+02 0.0028 30.7 5.9 91 404-511 63-155 (336)
324 cd00956 Transaldolase_FSA Tran 28.4 3.5E+02 0.0076 25.6 8.7 102 400-504 83-185 (211)
325 PRK00043 thiE thiamine-phospha 28.0 4.8E+02 0.01 24.0 9.7 88 408-507 94-191 (212)
326 PRK13125 trpA tryptophan synth 28.0 4.6E+02 0.0099 25.3 9.6 97 405-507 116-217 (244)
327 PRK06552 keto-hydroxyglutarate 27.6 5.2E+02 0.011 24.5 9.6 86 409-502 5-93 (213)
328 TIGR03365 Bsubt_queE 7-cyano-7 27.4 51 0.0011 31.9 2.8 29 403-431 85-113 (238)
329 PRK08649 inosine 5-monophospha 27.3 6.1E+02 0.013 26.3 10.8 90 407-509 120-220 (368)
330 PLN02997 flavonol synthase 27.1 71 0.0015 32.5 3.9 36 173-211 32-68 (325)
331 PRK10076 pyruvate formate lyas 26.8 98 0.0021 29.4 4.5 37 403-439 51-90 (213)
332 TIGR02845 spore_V_AD stage V s 26.8 1.7E+02 0.0036 29.8 6.3 62 442-504 26-102 (327)
333 KOG2116 Protein involved in pl 26.5 1E+02 0.0022 34.1 5.0 16 284-299 530-545 (738)
334 PRK08304 stage V sporulation p 26.4 1.2E+02 0.0026 31.0 5.2 63 442-505 32-109 (337)
335 TIGR03609 S_layer_CsaB polysac 26.0 5.8E+02 0.013 25.1 10.3 82 406-505 192-277 (298)
336 PRK14501 putative bifunctional 25.9 1.1E+02 0.0023 34.9 5.5 17 283-299 491-507 (726)
337 PRK00286 xseA exodeoxyribonucl 25.9 2.8E+02 0.006 29.4 8.3 62 419-484 136-199 (438)
338 TIGR02244 HAD-IG-Ncltidse HAD 25.8 60 0.0013 33.3 3.0 20 280-299 8-27 (343)
339 TIGR02495 NrdG2 anaerobic ribo 25.4 1E+02 0.0022 28.3 4.3 28 402-429 74-101 (191)
340 COG1598 Predicted nuclease of 25.3 1.1E+02 0.0023 23.7 3.7 29 208-239 24-52 (73)
341 PRK10017 colanic acid biosynth 25.1 5E+02 0.011 27.5 9.9 86 406-506 261-355 (426)
342 PLN02382 probable sucrose-phos 24.9 45 0.00097 35.2 2.0 14 285-298 10-23 (413)
343 TIGR02250 FCP1_euk FCP1-like p 24.5 41 0.0009 30.2 1.4 16 285-300 7-22 (156)
344 TIGR01425 SRP54_euk signal rec 24.4 4.3E+02 0.0093 28.1 9.1 58 447-504 182-247 (429)
345 PLN02639 oxidoreductase, 2OG-F 24.2 82 0.0018 32.2 3.7 36 173-211 37-73 (337)
346 PRK08564 5'-methylthioadenosin 24.2 6.1E+02 0.013 25.0 9.7 21 408-428 73-93 (267)
347 PLN02704 flavonol synthase 24.1 83 0.0018 32.1 3.7 36 173-211 42-78 (335)
348 PF03808 Glyco_tran_WecB: Glyc 24.1 3.6E+02 0.0078 24.4 7.6 75 405-487 35-111 (172)
349 cd05008 SIS_GlmS_GlmD_1 SIS (S 23.4 69 0.0015 27.0 2.6 31 404-434 59-89 (126)
350 PF04413 Glycos_transf_N: 3-De 23.2 4.9E+02 0.011 23.9 8.5 86 406-504 36-125 (186)
351 KOG0210 P-type ATPase [Inorgan 22.4 4.4E+02 0.0095 29.8 8.7 79 402-488 658-739 (1051)
352 TIGR01101 V_ATP_synt_F vacuola 22.3 2.2E+02 0.0049 24.2 5.4 63 405-472 46-112 (115)
353 TIGR00237 xseA exodeoxyribonuc 22.3 3.5E+02 0.0077 28.7 8.2 63 419-484 130-194 (432)
354 PHA02530 pseT polynucleotide k 22.3 80 0.0017 31.3 3.2 16 284-299 158-173 (300)
355 TIGR02826 RNR_activ_nrdG3 anae 22.2 1.2E+02 0.0026 27.0 3.9 26 404-429 74-99 (147)
356 PF06189 5-nucleotidase: 5'-nu 22.2 7.3E+02 0.016 24.4 9.4 76 418-506 36-111 (264)
357 cd05014 SIS_Kpsf KpsF-like pro 22.1 83 0.0018 26.6 2.8 32 403-434 59-90 (128)
358 PF01993 MTD: methylene-5,6,7, 21.7 3.1E+02 0.0066 26.7 6.6 79 418-504 30-115 (276)
359 PRK08931 5'-methylthioadenosin 21.3 8.3E+02 0.018 24.4 10.2 20 409-428 70-89 (289)
360 cd06589 GH31 The enzymes of gl 21.3 77 0.0017 31.1 2.8 29 401-429 62-90 (265)
361 PF04413 Glycos_transf_N: 3-De 21.2 1E+02 0.0022 28.5 3.4 79 402-491 105-185 (186)
362 PLN02485 oxidoreductase 21.2 1.1E+02 0.0024 31.1 3.9 23 185-210 33-55 (329)
363 PF04230 PS_pyruv_trans: Polys 20.8 3.5E+02 0.0075 25.4 7.3 42 458-506 244-285 (286)
364 COG0241 HisB Histidinol phosph 20.5 60 0.0013 30.1 1.7 15 284-298 5-19 (181)
365 KOG0206 P-type ATPase [General 20.0 4E+02 0.0087 32.1 8.5 39 401-439 650-688 (1151)
No 1
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=3.3e-44 Score=342.25 Aligned_cols=201 Identities=22% Similarity=0.320 Sum_probs=175.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCCCC
Q 010305 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (513)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p~~ 106 (513)
++++|++|+++||+++++||+.+++||||+|++++ +.|||||||.++++++++||++||++|++++|. .+|
T Consensus 3 ~~~~r~~i~~~~~~l~~~gl~~g~~GniS~r~~~~------~~~~ItpsG~~~~~l~~~div~vd~~g~~i~g~-~~p-- 73 (214)
T PRK06833 3 LQKEREEIVAYGKKLISSGLTKGTGGNISIFNREQ------GLMAITPSGIDYFEIKPEDIVIMDLDGKVVEGE-RKP-- 73 (214)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCceEEEEeCCC------CEEEEcCCCCChhhCCHHHEEEEcCCCCCcCCC-CCC--
Confidence 45689999999999999999999999999999763 489999999999999999999999999999985 345
Q ss_pred CCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCC-CCch
Q 010305 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (513)
Q Consensus 107 ~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~ 184 (513)
|+|+.||+.||+.| |++||||+||||++++|+.+. ++|...+... .+++ .||+.+|. +++.
T Consensus 74 ------s~E~~lH~~iy~~rpdv~aVvH~H~~~a~a~s~~~~---~lp~~~~~~~-~~~~-------~i~~~~y~~~gs~ 136 (214)
T PRK06833 74 ------SSELDMHLIFYRNREDINAIVHTHSPYATTLACLGW---ELPAVHYLIA-VAGP-------NVRCAEYATFGTK 136 (214)
T ss_pred ------CccHHHHHHHHHhCCCCCEEEEeCcHHHHHHHHcCC---CCCcchhHHH-HHCC-------CeeeccCCCCChH
Confidence 89999999999999 999999999999999999875 3443333222 1222 38998885 6899
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 010305 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (513)
Q Consensus 185 ~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (513)
++++.++++|++ .++|||+|||+++||+|+++||.+++.+|++|++++.++++|.+.+ .++++++++++
T Consensus 137 ~la~~v~~~l~~---~~~vll~nHGv~~~G~~~~eA~~~~e~lE~~a~~~~~a~~~G~~~~-l~~~~~~~~~~ 205 (214)
T PRK06833 137 ELAENAFEAMED---RRAVLLANHGLLAGANNLKNAFNIAEEIEFCAEIYYQTKSIGEPKL-LPEDEMENMAE 205 (214)
T ss_pred HHHHHHHHHhCc---CCEEEECCCCCEEEeCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCHHHHHHHHH
Confidence 999999999986 6999999999999999999999999999999999999999998865 46657777644
No 2
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=3e-44 Score=342.50 Aligned_cols=203 Identities=22% Similarity=0.307 Sum_probs=177.1
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCC
Q 010305 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (513)
Q Consensus 25 ~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p 104 (513)
|..+++|++|+++||+++++||+.+++||||+|+++ .|||||||.++++|+++||++||++|++++|. +|
T Consensus 1 ~~~~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~di~~vd~~G~~~~g~--~p 70 (215)
T PRK08087 1 MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQD--------GMLITPTGIPYEKLTESHIVFVDGNGKHEEGK--LP 70 (215)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEcCC--------CEEEeCCCCChhhCCHHHEEEECCCCCCCCCC--CC
Confidence 456789999999999999999999999999999976 69999999999999999999999999999874 55
Q ss_pred CCCCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCC-CC
Q 010305 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AY 182 (513)
Q Consensus 105 ~~~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~ 182 (513)
|+|+.||+.||+.| |++||+|+||+|++++|+... ++|...... ..+++ ..||+++|. ++
T Consensus 71 --------s~E~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~---~ip~~~~~~-~~~~~------~~v~~~~y~~~g 132 (215)
T PRK08087 71 --------SSEWRFHMAAYQTRPDANAVVHNHAVHCTAVSILNR---PIPAIHYMI-AAAGG------NSIPCAPYATFG 132 (215)
T ss_pred --------ChhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCC---CCCcHHHHH-HHHcC------CCceeecCCCCC
Confidence 89999999999999 999999999999999999874 344333222 22211 138999985 68
Q ss_pred chHHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccccccc
Q 010305 183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLG 258 (513)
Q Consensus 183 ~~~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~~ 258 (513)
+.+++++++++|++ .+++||+|||+++||+|+++|+.+++++|++|++++.++++|++....+++++++++..
T Consensus 133 s~~la~~~~~~l~~---~~~vLl~nHGv~~~G~~~~~A~~~~e~lE~~a~~~~~a~~~g~~~~~l~~e~~~~~~~~ 205 (215)
T PRK08087 133 TRELSEHVALALKN---RKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLKTLAITDPVPVLSDEEIAVVLEK 205 (215)
T ss_pred CHHHHHHHHHHhCc---CCEEEecCCCCEEEcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 99999999999987 69999999999999999999999999999999999999999987666777788887543
No 3
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=100.00 E-value=1.3e-43 Score=337.30 Aligned_cols=198 Identities=21% Similarity=0.283 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCC-CCCCCC
Q 010305 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSP-SPKPYP 106 (513)
Q Consensus 28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~-~~~p~~ 106 (513)
+..|++|+++||+++++||+.+++||||+|++++ .|||||||+++++|+++||++||++|+++++. +.+|
T Consensus 5 ~~~r~~i~~~~~~l~~~Gl~~g~~GNiS~R~~~~-------~~lITPsg~~~~~l~~~Div~vd~~G~~i~~~~~~kP-- 75 (217)
T PRK05874 5 DDPESAVLAAAKDMLRRGLVEGTAGNISARRSDG-------NVVITPSSVDYAEMLLHDLVLVDAGGAVLHAKDGRSP-- 75 (217)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCC-------CEEEeCCCCChhhCCHHHEEEEcCCCCEecCCCCCCC--
Confidence 5679999999999999999999999999999873 79999999999999999999999999999753 2344
Q ss_pred CCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCC-CCch
Q 010305 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (513)
Q Consensus 107 ~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~ 184 (513)
|+|+.||+.||+.| |++||+|+||+|++++|+... ++|....+....+++ .||+.+|. +++.
T Consensus 76 ------ssE~~~H~~iY~~rpdv~aViHtH~~~a~a~s~~~~---~l~~~~~~~~~~~~~-------~v~~~~y~~~gs~ 139 (217)
T PRK05874 76 ------STELNLHLACYRAFDDIGSVIHSHPVWATMFAVAHE---PIPACIDEFAIYCGG-------DVRCTEYAASGTP 139 (217)
T ss_pred ------chhHHHHHHHHHhCCCCCEEEECCcHHHHHHHHcCC---CCCcchhHHHHHcCC-------ceeeecCCCCCcH
Confidence 99999999999999 999999999999999999874 344322222222222 38999995 6899
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccc
Q 010305 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRN 254 (513)
Q Consensus 185 ~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~ 254 (513)
+++++++++|++ +++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+++++++ +.++
T Consensus 140 ela~~v~~~l~~---~~~vlL~nHGv~~~G~~l~~A~~~~e~lE~~a~~~~~a~~~G~~~~l~~e-~~~~ 205 (217)
T PRK05874 140 EVGRNAVRALEG---RAAALIANHGLVAVGPRPDQVLRVTALVERTAQIVWGARALGGPVPIPED-VCRN 205 (217)
T ss_pred HHHHHHHHHhCc---CCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCHH-HHHH
Confidence 999999999987 69999999999999999999999999999999999999999988766543 4433
No 4
>PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=7e-43 Score=336.25 Aligned_cols=204 Identities=20% Similarity=0.290 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCCCC
Q 010305 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (513)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p~~ 106 (513)
++++|++|+++||+|+++||+.+++||||+|++++ +.|||||||.++++|+++||++||++|++++|. .+|
T Consensus 2 ~~~~r~~i~~~~~~l~~~gl~~g~~GNiS~r~~~~------~~~~ItpsG~~~~~l~~~Div~vd~dG~~~~g~-~kP-- 72 (231)
T PRK08193 2 LEDLKQEVLEANLALPKHGLVTFTWGNVSAIDRER------GLFVIKPSGVDYDKMTAEDMVVVDLEGNVVEGK-LKP-- 72 (231)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEecCC------CEEEEeCCCCChhhCChHHEEEECCCCCCCCCC-CCc--
Confidence 56789999999999999999999999999998663 479999999999999999999999999999985 355
Q ss_pred CCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCCC----
Q 010305 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA---- 181 (513)
Q Consensus 107 ~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~---- 181 (513)
|+|+.||+.||+.| |++||+|+||||+++||+.+. ++|.........+.| .||+++|.+
T Consensus 73 ------SsE~~~H~~IYr~rpdv~AVvHtHsp~ata~s~~~~---~l~~~~~~~~~~~~~-------~ip~~~~~~~~~~ 136 (231)
T PRK08193 73 ------SSDTPTHLVLYKAFPEIGGIVHTHSRHATAWAQAGR---DIPALGTTHADYFYG-------DIPCTRKMTDEEI 136 (231)
T ss_pred ------CccHHHHHHHHHhCCCCcEEEecCcHHHHHHHhcCC---CCCcchHHHHHHhCC-------CcceecCCCcccc
Confidence 99999999999999 999999999999999999864 333322111112222 399998742
Q ss_pred ---CchHHHHHHHHHHhhC----CCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccc
Q 010305 182 ---YENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRN 254 (513)
Q Consensus 182 ---~~~~la~~v~~~l~~~----~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~ 254 (513)
+..++++.++++|+++ ++.+++||+|||+++||+|+++|+.+++.+|++|++++.++++|.+....+++++++
T Consensus 137 ~~~~~~~~~~~ia~~l~~~~~~~~~~~avLl~nHG~v~~G~~l~eA~~~~e~lE~~a~~~~~a~~lg~~~~~l~~e~~~~ 216 (231)
T PRK08193 137 NGEYEWETGKVIVETFEKRGIDPAAVPGVLVHSHGPFTWGKDAEDAVHNAVVLEEVAKMAYFTRQLNPQLPDMQQTLLDK 216 (231)
T ss_pred cccchhhHHHHHHHHHhhccCCcccCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHH
Confidence 3468999999999863 245799999999999999999999999999999999999999995455556657666
Q ss_pred c
Q 010305 255 F 255 (513)
Q Consensus 255 ~ 255 (513)
+
T Consensus 217 ~ 217 (231)
T PRK08193 217 H 217 (231)
T ss_pred H
Confidence 5
No 5
>PRK12348 sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=6.5e-43 Score=335.55 Aligned_cols=202 Identities=17% Similarity=0.250 Sum_probs=168.5
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCCCCC
Q 010305 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH 107 (513)
Q Consensus 28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p~~~ 107 (513)
+++|++|++++|+++++||+.+++||||+|++++ +.|+|||||.++++|+++||++||++|++++|. .+|
T Consensus 2 ~~~~~~l~~~~~~l~~~Gl~~g~~GNiS~r~~~~------~~~lItPsG~~~~~l~~~dlv~vd~dG~~ieg~-~kp--- 71 (228)
T PRK12348 2 QKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRER------GLVVIKPSGVAYETMKADDMVVVDMSGKVVEGE-YRP--- 71 (228)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcCCCeEEEEeCCC------CEEEEeCCCCChhhCCHHHEEEECCCCCCCCCC-CCC---
Confidence 4689999999999999999999999999998763 489999999999999999999999999999985 355
Q ss_pred CCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccc-hHHHHhhhcCCcccccceeeeecCC-----
Q 010305 108 KPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRIT-HMEMIKGIKGHGYYDELVVPIIENT----- 180 (513)
Q Consensus 108 ~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~vpv~~~~----- 180 (513)
|+|+.||+.||+.| |++||||+||||+++||+.+. ++|.. ..+.. .+.| .||++++.
T Consensus 72 -----ssE~~lH~~IYr~rpdv~aVvHtH~p~ata~a~~~~---~ip~~~~~~~~-~~~g-------~i~~~~~~~~~~~ 135 (228)
T PRK12348 72 -----SSDTATHLELYRRYPSLGGIVHTHSTHATAWAQAGL---AIPALGTTHAD-YFFG-------DIPCTRGLSEEEV 135 (228)
T ss_pred -----CccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCC---CCCCccHHHHH-HhCC-------CeeeecCCCchhh
Confidence 89999999999999 999999999999999999974 34432 22222 2222 38887762
Q ss_pred --CCchHHHHHHHHHHhhC--CCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccc
Q 010305 181 --AYENELTDSLAKAIDAY--PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNF 255 (513)
Q Consensus 181 --~~~~~la~~v~~~l~~~--~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~ 255 (513)
++..++++.+++++++. .+.+++||+|||++++|+|+.+||.+++.+|++|++++.++++|.+....+++.++++
T Consensus 136 ~~~~~~~~~~~la~~l~~~~~~~~~avlL~nHG~v~~G~~l~eA~~~~~~lE~~a~~~~~a~~lg~~~~~~~~~~~~~~ 214 (228)
T PRK12348 136 QGEYELNTGKVIIETLGNAEPLHTPGIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARGINPQLNHIDSYLMNKH 214 (228)
T ss_pred ccchhhhHHHHHHHHHhhcCcccCcEEEEcCCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCHHHHHHH
Confidence 23346788899999862 1347999999999999999999999999999999999999999964444555566555
No 6
>TIGR00760 araD L-ribulose-5-phosphate 4-epimerase. The homolog to this family from Mycobacterium smegmatis is flanked by putative araB and araA genes, consistent with it also being araD.
Probab=100.00 E-value=8.9e-43 Score=335.26 Aligned_cols=203 Identities=20% Similarity=0.286 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCC-CCeecCCCCCCC
Q 010305 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSSPSPKPY 105 (513)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~-g~~~~g~~~~p~ 105 (513)
++++|++|+++||+|+++||+.+++||||+|++++ +.|||||||.++++|+++||++||++ |++++|. .+|
T Consensus 2 ~~~~~~ei~~~~~~l~~~gl~~~~~GNiS~R~~~~------~~~lITPsG~~~~~l~~~div~vdl~~G~~i~g~-~kp- 73 (231)
T TIGR00760 2 LEQLKKEVLEANLALPKHQLVTFTWGNVSAIDRER------GLVVIKPSGVEYDVMTADDMVVVDLETGNVVEGS-KKP- 73 (231)
T ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCCeEEEEecCC------CEEEEeCCCCChhhCCHHHEEEEcCcCCccCCCC-CCC-
Confidence 46789999999999999999999999999998663 47999999999999999999999999 9999986 355
Q ss_pred CCCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccch-HHHHhhhcCCcccccceeeeecCC---
Q 010305 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITH-MEMIKGIKGHGYYDELVVPIIENT--- 180 (513)
Q Consensus 106 ~~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~vpv~~~~--- 180 (513)
|+|+.||+.||+.| |++||||+||||+++||+.+. ++|..+ .+.. .+.| .||++++.
T Consensus 74 -------S~E~~lH~~IYr~rpdv~aVvHtH~p~ata~a~~~~---~lp~~~~~~~~-~~~g-------~ip~~~~~~~~ 135 (231)
T TIGR00760 74 -------SSDTPTHLALYRAFPSIGGIVHTHSRHATIWAQAGK---DIPALGTTHAD-YFYG-------TIPCTRPMTDE 135 (231)
T ss_pred -------CccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCC---CCCCcchHHHH-HhCC-------ceeeecCCCcc
Confidence 89999999999999 999999999999999999975 344332 2222 2222 38887653
Q ss_pred ----CCchHHHHHHHHHHhhC----CCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Q 010305 181 ----AYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPT 252 (513)
Q Consensus 181 ----~~~~~la~~v~~~l~~~----~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~ 252 (513)
+...++++.++++++++ .+.+++||+|||++++|+|+.+||.+++.+|++|++++.++++|.+....+++++
T Consensus 136 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~avlL~nHGvv~~G~~l~eA~~~~e~lE~~Ak~~~~a~~~g~~~~~~~~~~~ 215 (231)
T TIGR00760 136 EINGEYELETGKVIVETFEKRGIDPAQIPGVLVHSHGPFAWGKDAANAVHNAVVLEEVAYMALFSRQLNPQLPPMQQTLL 215 (231)
T ss_pred cccccchHhHHHHHHHHHhhccCCcccCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHH
Confidence 23458899999999862 1237999999999999999999999999999999999999999975555566566
Q ss_pred ccc
Q 010305 253 RNF 255 (513)
Q Consensus 253 ~~~ 255 (513)
+++
T Consensus 216 ~~~ 218 (231)
T TIGR00760 216 DKH 218 (231)
T ss_pred HHH
Confidence 554
No 7
>PRK13213 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=1.4e-42 Score=331.33 Aligned_cols=203 Identities=19% Similarity=0.232 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCC-CCeecCCCCCCC
Q 010305 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSSPSPKPY 105 (513)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~-g~~~~g~~~~p~ 105 (513)
++++|++|+++||+|+++||+.+++||||+|++++ +.|+|||||+++++|+++||++||++ |++++|. .+|
T Consensus 2 ~~~~r~evv~~~~~l~~~gl~~gt~GNiS~r~~~~------~~~~ITpsg~~~~~l~~~div~vd~~~g~~~~g~-~kP- 73 (231)
T PRK13213 2 LEQLKQQVFEANLALPKYKLVTFTWGNVSGIDREH------GLVVIKPSGVEYDVMSVNDMVVVDLATGKVVEGD-KKP- 73 (231)
T ss_pred hHHHHHHHHHHHHHHHHCCCCCCCcceEEEEECCC------CEEEEECCCCCcccCCHHHEEEEEcCCCCCcCCC-CCc-
Confidence 46789999999999999999999999999998653 48999999999999999999999995 9999986 455
Q ss_pred CCCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCCC---
Q 010305 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA--- 181 (513)
Q Consensus 106 ~~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~--- 181 (513)
|+|+.||+.||+.| |++||||+||+|+++||+.+.. +|.........++| .||+++|.+
T Consensus 74 -------SsE~~lH~~iY~~rpdv~AViHtHs~~at~~a~~~~~---lp~~~~~~~~~~~g-------~Ip~~~~~~~~~ 136 (231)
T PRK13213 74 -------SSDTDTHLVLYRAFAEIGGIVHTHSRHATIWAQAGKS---LSALGTTHADYFYG-------PIPCTRLMTEAE 136 (231)
T ss_pred -------CccHHHHHHHHHhCCCCCEEEEcCCHHHHHHHHcCCC---CCCcchHHHHHhCC-------Ccceeecccccc
Confidence 99999999999999 9999999999999999999753 43322212222333 388888753
Q ss_pred --Cc--hHHHHHHHHHHhhC----CCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCCcc
Q 010305 182 --YE--NELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL-GLDWSTPNHGPT 252 (513)
Q Consensus 182 --~~--~~la~~v~~~l~~~----~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~-g~~~~~~~~~~~ 252 (513)
++ .++++.+++.+++. ++.++|||+|||+++||+|+.+||.+++.+|++|++++.++++ |++.+++++ ++
T Consensus 137 ~~g~~~~~~~~~~a~~~~~~~~~~~~~~avlL~nHG~v~~G~~l~eA~~~~e~lE~~A~i~~~a~~l~g~~~~l~~~-~~ 215 (231)
T PRK13213 137 ITGDYEHETGKVIVETFAEQGLRAADIPAVLVNGHGPFAWGSNAANAVHNAVVLEEIAYMNLFTHQLTPGVGDMQQT-LL 215 (231)
T ss_pred cCCccccchHHHHHHHHHhhcccccCCCEEEECCCCcEEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHH-HH
Confidence 43 48889999988642 3468999999999999999999999999999999999999999 666555444 55
Q ss_pred ccc
Q 010305 253 RNF 255 (513)
Q Consensus 253 ~~~ 255 (513)
+.+
T Consensus 216 ~~~ 218 (231)
T PRK13213 216 DKH 218 (231)
T ss_pred HHH
Confidence 554
No 8
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=100.00 E-value=5.3e-43 Score=333.44 Aligned_cols=200 Identities=26% Similarity=0.424 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCCCCCC
Q 010305 29 ETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHK 108 (513)
Q Consensus 29 ~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p~~~~ 108 (513)
++|++|+++||+++++||+.+++||||+|++++ +.|||||||+++++++++||++||++|++++| .+|
T Consensus 2 ~~~~~l~~~~r~l~~~Gl~~~~~GniS~R~~~~------~~~~itpsG~~~~~l~~~dlv~vd~~g~~~~g--~~p---- 69 (209)
T cd00398 2 KLKRKIIAACLLLDLYGWVTGTGGNVSARDRDR------GYFLITPSGVDYEEMTASDLVVVDAQGKVVEG--KKP---- 69 (209)
T ss_pred hHHHHHHHHHHHHHHcCCcccCCceEEEEeCCC------CEEEEeCCCCChHHCCHhhEEEEcCCCCCcCC--CCC----
Confidence 478999999999999999999999999999873 48999999999999999999999999999985 355
Q ss_pred CCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCC-C--Cch
Q 010305 109 PPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-A--YEN 184 (513)
Q Consensus 109 p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~--~~~ 184 (513)
|+|+.||..||+.| |++||+|+||+|++++|+.+. .++|..+.++...+.+ .||++||. | ++.
T Consensus 70 ----s~E~~lH~~iy~~rpdv~aViHtH~~~~~a~s~~~~--~~~p~~~~~~~~~~~~-------~ip~~~~~~~~~~~~ 136 (209)
T cd00398 70 ----SSETPLHLALYRARPDIGCIVHTHSTHATAVSQLKE--GLIPAGHTACAVYFTG-------DIPCTPYMTPETGED 136 (209)
T ss_pred ----CccHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHhCC--CCCCcchHHHHHHcCC-------CeeecCCcCCCccHH
Confidence 89999999999999 999999999999999999874 2455555444433322 39999995 5 688
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccccc
Q 010305 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (513)
Q Consensus 185 ~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (513)
++++.+++.+++ .+++||+|||+++||+|+.+|+.+++.+|++|++++.++++|++....+++++++++
T Consensus 137 ~la~~~~~~l~~---~~~vll~nHG~~~~G~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~l~~~~~~~~~ 205 (209)
T cd00398 137 EIGTQRALGFPN---SKAVLLRNHGLFAWGPTLDEAFHLAVVLEVAAEIQLKALSMGGQLPPISLELLNKEY 205 (209)
T ss_pred HHHHHHhcCCCc---CCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 999999988865 699999999999999999999999999999999999999999876566777777764
No 9
>PRK07490 hypothetical protein; Provisional
Probab=100.00 E-value=1e-42 Score=337.83 Aligned_cols=208 Identities=15% Similarity=0.181 Sum_probs=175.3
Q ss_pred HhcccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCC-CeecCC
Q 010305 22 LEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNG-TTLSSP 100 (513)
Q Consensus 22 ~~~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g-~~~~g~ 100 (513)
|-+++++++|++|+++||.++++||+.+++||||+|++++ .+.|||||||.++++|+++||++||++| ++++|.
T Consensus 3 ~~~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GniS~r~~~~-----~~~~lItpsG~~~~~l~~~div~vd~dg~~~~~g~ 77 (245)
T PRK07490 3 MALSDEEQIRVDLAAAFRWIARLGMHEAVANHFSAAVSAD-----GKQFLLNPKWKHFSRIRASDLLLLDADDPSTAERP 77 (245)
T ss_pred cccHHHHHHHHHHHHHHHHHHHcCCcccccceEEEEccCC-----CCeEEEcCCCCChhhCcHHHeEEEcCCCCcccCCC
Confidence 3456788999999999999999999999999999999742 2489999999999999999999999999 567775
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeee-c
Q 010305 101 SPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPII-E 178 (513)
Q Consensus 101 ~~~p~~~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~-~ 178 (513)
+.+| |+|+.||+.||+.| |++||||+||+|++++|++... .+|........ +.| .||++ +
T Consensus 78 ~~~p--------sse~~lH~~iYr~rpdv~aVvHtH~~~ata~s~~~~~--~lp~~~~~~~~-~~g-------~v~~~~~ 139 (245)
T PRK07490 78 DVPD--------ATAWAIHGQIHRRLPHARCVMHVHSVYATALACLADP--TLPPIDQNTAR-FFN-------RVAVDTL 139 (245)
T ss_pred CCCC--------cHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHhcCC--CCCCccHHHHH-HcC-------CeeeccC
Confidence 3223 89999999999999 9999999999999999999642 24332222221 222 38886 4
Q ss_pred CC-CCchHHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccc
Q 010305 179 NT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNF 255 (513)
Q Consensus 179 ~~-~~~~~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~ 255 (513)
|. +++.++++.++++|++ .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+....++++++++
T Consensus 140 y~~~~~~ela~~v~~~l~~---~~avlL~nHG~v~~G~~~~eA~~~~e~lE~~a~~~l~a~~~G~~~~~l~~~~~~~~ 214 (245)
T PRK07490 140 YGGMALEEEGERLAGLLGD---KRRLLMGNHGVLVTGDTVAEAFDDLYYFERACQTYITALSTGQPLRVLSDAVAEKT 214 (245)
T ss_pred CCCcCcHHHHHHHHHHhCc---CCEEEECCCCcEEecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 64 5788999999999987 69999999999999999999999999999999999999999987556677677665
No 10
>PRK05834 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-42 Score=323.41 Aligned_cols=186 Identities=8% Similarity=0.105 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCCCC
Q 010305 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (513)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p~~ 106 (513)
..++|++|++++++++++||+.+++||||+|++++ .|+|||||.++++|+|+||++| ++|+.+++. +|
T Consensus 3 ~~~~~~el~~~~~~l~~~gl~~gt~GNiS~R~~~~-------~~lITPsG~~~~~l~~ediv~v-~~g~~~~~~--kP-- 70 (194)
T PRK05834 3 DSNLIDELKSISLSMFRKNFFGLYHGSISAKIEAN-------QFIINKQNAIFDELDENSLIVL-YDKKDYRWK--EA-- 70 (194)
T ss_pred HHHHHHHHHHHHHHHHHCCCcccccceEEEEeCCC-------cEEEeCCCCccccCCHHHeEEE-eCCCccCCC--CC--
Confidence 34789999999999999999999999999999763 7999999999999999999999 899877653 55
Q ss_pred CCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCCC-Cc-
Q 010305 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA-YE- 183 (513)
Q Consensus 107 ~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~-~~- 183 (513)
|+|++||+.||+.| |++||||+||+|++++|+.+. ++|...+++.. +.| .||+++|.+ ++
T Consensus 71 ------SsE~~~H~~IY~~rpdv~AVvHtHs~~ata~s~~~~---~i~~~~~~~~~-~~g-------~ipv~~~~~~~~~ 133 (194)
T PRK05834 71 ------SIDSPIHASIYKNISEAKFIAYAMPPYTTAYSLRHN---KILPRDYFGYR-SLG-------EISIYDPKDFDDW 133 (194)
T ss_pred ------CccHHHHHHHHhcCCCCCEEEEeCCHHHHHHHhcCC---CcCccChhHHh-hCC-------eeeecCccccchH
Confidence 99999999999999 999999999999999999864 45555554433 222 399998753 43
Q ss_pred -hHHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 010305 184 -NELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 242 (513)
Q Consensus 184 -~~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~ 242 (513)
+++++++++++++. +.+++||+|||+++||+|+.+||.+++.+|++|++++.++++|.
T Consensus 134 ~~~la~~v~~~l~~~-~~~avLL~nHGvv~~G~~l~eA~~~~e~lE~~a~i~~~a~~~~~ 192 (194)
T PRK05834 134 YERADTEILRYLQEK-NKNFVVIKGYGVYAYARDIYELAKKIAILENSCKILRLSDLMDR 192 (194)
T ss_pred HHhHHHHHHHHHhhc-CCCEEEEcCCcceEECCCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 25789999999862 23499999999999999999999999999999999999999886
No 11
>PRK08130 putative aldolase; Validated
Probab=100.00 E-value=1.1e-42 Score=331.84 Aligned_cols=203 Identities=23% Similarity=0.345 Sum_probs=171.6
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCC
Q 010305 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (513)
Q Consensus 25 ~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p 104 (513)
|.++++|++|++++|+++++||+.+++||||+|++++ .|||||||+++++|+++||++||++|++++|. +|
T Consensus 1 ~~~~~~~~~l~~~~~~l~~~gl~~~~~GNiS~R~~~~-------~~lItpsG~~~~~l~~~div~vd~~g~~~~g~--~p 71 (213)
T PRK08130 1 MTEQALREEIVRLGRSLFQRGYTVGSAGNISARLDDG-------GWLVTPTGSCLGRLDPARLSKVDADGNWLSGD--KP 71 (213)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCC-------CEEEeCCCCCccCCCHhHEEEECCCCCCCCCC--CC
Confidence 4578899999999999999999999999999999874 79999999999999999999999999999874 55
Q ss_pred CCCCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCC--CcccccchHHHHhhhcCCcccccceeeeecCC-
Q 010305 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPM--SKEFRITHMEMIKGIKGHGYYDELVVPIIENT- 180 (513)
Q Consensus 105 ~~~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~- 180 (513)
|+|+.+|+.||+.| |++||+|+||||++++|+.+.. ...++....+....+ | .||++||.
T Consensus 72 --------s~E~~~H~~iy~~rpdv~avvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~~-g-------~i~v~~y~~ 135 (213)
T PRK08130 72 --------SKEVPLHRAIYRNNPECGAVVHLHSTHLTALSCLGGLDPTNVLPPFTPYYVMRV-G-------HVPLIPYYR 135 (213)
T ss_pred --------ChhHHHHHHHHHhCCCCCEEEECCcHHHHHHHhcCccccccCCCCCChhhhhcc-C-------ccceECCCC
Confidence 89999999999999 9999999999999999998631 012322122222112 2 39999985
Q ss_pred CCchHHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 010305 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (513)
Q Consensus 181 ~~~~~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (513)
|++.++++.+++.+++ .++|||+|||+++||+|+++|+.+++.+|++|++++.++.++ +..+ +++++++++.
T Consensus 136 ~g~~~la~~~~~~l~~---~~~vll~nHGvi~~G~s~~~A~~~~e~lE~~a~~~~~a~~~~-~~~l-~~~~~~~~~~ 207 (213)
T PRK08130 136 PGDPAIAEALAGLAAR---YRAVLLANHGPVVWGSSLEAAVNATEELEETAKLILLLGGRP-PRYL-TDEEIAELRS 207 (213)
T ss_pred CChHHHHHHHHHHhcc---CCEEEEcCCCCeeeCCCHHHHHHHHHHHHHHHHHHHHhcCCC-CCCC-CHHHHHHHHH
Confidence 7899999999999987 699999999999999999999999999999999999997653 4444 5557777644
No 12
>PRK12347 sgbE L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=2.1e-42 Score=332.11 Aligned_cols=203 Identities=19% Similarity=0.282 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeC-CCCeecCCCCCCC
Q 010305 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSG-NGTTLSSPSPKPY 105 (513)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~-~g~~~~g~~~~p~ 105 (513)
++++|++|+++||+|+++||+.+++||||+|++++ +.|||||||+++++|+++||++||+ +|++++|. .+|
T Consensus 2 ~~~~~~~iv~~~~~l~~~gl~~~t~GNiS~R~~~~------~~~~ItPsG~~~~~l~~~div~vd~~~G~~i~g~-~kp- 73 (231)
T PRK12347 2 LEQLKADVLAANLALPAHHLVTFTWGNVSAVDETR------QLMVIKPSGVEYDVMTADDMVVVEIASGKVVEGS-KKP- 73 (231)
T ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCceEEEEecCC------CeEEEeCCCCCcccCCHHHEEEEEcCCCcCCCCC-CCc-
Confidence 56789999999999999999999999999998763 4799999999999999999999999 99999985 355
Q ss_pred CCCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccc-hHHHHhhhcCCcccccceeeeecCC---
Q 010305 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRIT-HMEMIKGIKGHGYYDELVVPIIENT--- 180 (513)
Q Consensus 106 ~~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~vpv~~~~--- 180 (513)
|+|+.||+.||+.| |++||||+||||+++||+.+.. +|.. ..+. ..+.| .||+++|.
T Consensus 74 -------S~E~~lH~~iYr~rpdv~aViHtHs~~ata~a~~~~~---lp~~~~~~~-~~~~g-------~Ip~~~~~~~~ 135 (231)
T PRK12347 74 -------SSDTPTHLALYRRYPEIGGIVHTHSRHATIWSQAGLD---LPAWGTTHA-DYFYG-------AIPCTRLMTAE 135 (231)
T ss_pred -------CccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCcchHHH-HHhCC-------ceeeecccCch
Confidence 89999999999999 9999999999999999999743 4332 2222 22322 38888763
Q ss_pred ----CCchHHHHHHHHHHhhC----CCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Q 010305 181 ----AYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPT 252 (513)
Q Consensus 181 ----~~~~~la~~v~~~l~~~----~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~ 252 (513)
++..++++.+++.++.+ ++.++|||+|||++++|+|+.+||.+++.+|++|++++.++++|......+.+++
T Consensus 136 ~~a~~~~~e~~~~va~~l~~~~~~~~~~~avLL~NHG~v~~G~~l~eA~~~~e~lE~~A~~~~~a~~lg~~~~~~~~~~~ 215 (231)
T PRK12347 136 EINGEYEYQTGEVIIETFEERGISPAQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELL 215 (231)
T ss_pred hcccccchhhHHHHHHHHhhccccccCCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHH
Confidence 34558899999999853 2468999999999999999999999999999999999999999944334444455
Q ss_pred ccc
Q 010305 253 RNF 255 (513)
Q Consensus 253 ~~~ 255 (513)
+++
T Consensus 216 ~~~ 218 (231)
T PRK12347 216 DKH 218 (231)
T ss_pred HHH
Confidence 553
No 13
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=100.00 E-value=1.6e-42 Score=332.67 Aligned_cols=203 Identities=21% Similarity=0.314 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCCCC
Q 010305 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (513)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p~~ 106 (513)
++++|++|++++|+++++||+.+++||||+|++++ +.|||||||.++++++++||++||++|++++|. .+|
T Consensus 8 ~~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~~------~~~~ItpsG~~~~~l~~~div~vd~~G~~~~g~-~~p-- 78 (221)
T PRK06557 8 VEKLREEVCKLHLELPKYGLVVWTSGNVSARDPGT------DLVVIKPSGVSYDDLTPEDMVVVDLDGNVVEGD-LKP-- 78 (221)
T ss_pred HHHHHHHHHHHHHHHHHCCCccccCceEEEEeCCC------CEEEEeCCCCChhhCCHHHEEEEcCCCCCcCCC-CCC--
Confidence 56789999999999999999999999999999763 589999999999999999999999999999884 345
Q ss_pred CCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCC-CCch
Q 010305 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (513)
Q Consensus 107 ~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~ 184 (513)
|+|+.||+.||+.| |++||+|+||||+++||+++. ++|.........+.+ .||+++|. +++.
T Consensus 79 ------s~E~~lH~~iy~~~pdv~aVvH~H~~~~~a~a~~~~---~~p~~~~~~~~~~~~-------~ip~~~y~~~g~~ 142 (221)
T PRK06557 79 ------SSDTASHLYVYRHMPDVGGVVHTHSTYATAWAARGE---PIPCVLTAMADEFGG-------PIPVGPFALIGDE 142 (221)
T ss_pred ------CccHHHHHHHHHhCCCCCEEEeeCcHHHHHHHHhCC---CCChhHHHHHHHhCC-------CeeccCCcCCCcH
Confidence 89999999999999 999999999999999999874 344322222222322 39999996 5889
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccccc
Q 010305 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (513)
Q Consensus 185 ~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (513)
++++.+++.++. ++.+++||+|||+++||+|+++|+.+++.+|++|++++.++++|.+..+ ++++++++.
T Consensus 143 ela~~i~~~l~~-~~~~~vll~nHG~~~~G~~~~eA~~~~e~lE~~a~~~~~a~~~G~~~~l-~~~~~~~~~ 212 (221)
T PRK06557 143 AIGKGIVETLKG-GRSPAVLMQNHGVFTIGKDAEDAVKAAVMVEEVARTVHIARQLGEPIPI-PQEEIDRLY 212 (221)
T ss_pred HHHHHHHHHhCc-CCCCEEEECCCCceEEcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CHHHHHHHH
Confidence 999999999931 2379999999999999999999999999999999999999999988754 555766663
No 14
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed
Probab=100.00 E-value=3.4e-42 Score=326.53 Aligned_cols=204 Identities=30% Similarity=0.494 Sum_probs=168.9
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCCC
Q 010305 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY 105 (513)
Q Consensus 26 ~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p~ 105 (513)
+.+..+++|++++|+++++||+.+++||||+|++++ ...|||||||.++++|+++||++||.+|++++|.+.+|
T Consensus 3 ~~~~~~~~l~~~~r~l~~~Gl~~g~~GNiSvR~~~~-----~~~~lITpSG~~~~~l~~~div~vd~~g~~~~~~~~kP- 76 (208)
T PRK06754 3 QLQRRWNELAEIKKELAARDWFPATSGNLSIKVSDD-----PLTFLVTASGKDKRKTTPEDFLLVDHDGKPVEETELKP- 76 (208)
T ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCEEEEEeCCC-----CCEEEEeCCCCCcccCCHHHEEEEcCCCCCCCCCCCCC-
Confidence 467889999999999999999999999999999763 12699999999999999999999999999998643455
Q ss_pred CCCCCCCCCchHHHHHHHHhcCccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCCCCchH
Q 010305 106 PHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENE 185 (513)
Q Consensus 106 ~~~p~~~S~E~~lH~~iy~~~d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~~~~~ 185 (513)
|+|+.||+.||+..|++||||+||+|++++|+.......+++...++++.++.........||++++.+++++
T Consensus 77 -------SsE~~lH~~iY~~pdv~aViHtH~~~at~~s~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~vpv~~~~~~~~e 149 (208)
T PRK06754 77 -------SAETLLHTHIYNNTNAGCVLHVHTVDNNVISELYGDDGAVTFQGQEIIKALGIWEENAEIHIPIIENHADIPT 149 (208)
T ss_pred -------CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHhhcCCCCeeeecChhhhhccCccccCceEEEEEecCCCCHHH
Confidence 9999999999986799999999999999999986322234443444444332100000124899986667899
Q ss_pred HHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 010305 186 LTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW 244 (513)
Q Consensus 186 la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~ 244 (513)
|++.+.++++. +.+++||+|||+++||+|+.+|+.++|.+|++|++++.+++++.+.
T Consensus 150 La~~v~~~l~~--~~~avLl~nHG~v~~G~~l~~A~~~~E~lE~~a~~~~~~~~~~~~~ 206 (208)
T PRK06754 150 LAEEFAKHIQG--DSGAVLIRNHGITVWGRDAFEAKKHLEAYEFLFSYHIKLLSIQGGV 206 (208)
T ss_pred HHHHHHHHhcc--CCcEEEECCCceEEEeCCHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 99999999972 2699999999999999999999999999999999999999987764
No 15
>PRK13145 araD L-ribulose-5-phosphate 4-epimerase; Provisional
Probab=100.00 E-value=3.8e-42 Score=330.97 Aligned_cols=205 Identities=19% Similarity=0.284 Sum_probs=169.2
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCCC
Q 010305 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY 105 (513)
Q Consensus 26 ~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p~ 105 (513)
..+++|++|+++||+|+++||+.+++||||+|++++ +.|+|||||+++++|+++||++||++|++++|. .+|
T Consensus 2 ~~~~~r~~l~~~~r~l~~~gl~~g~~GNiS~r~~~~------~~~~ItPsg~~~~~l~~~div~vd~~G~~~eG~-~kP- 73 (234)
T PRK13145 2 NLQEMRERVCAANKSLPKHGLVKFTWGNVSEVCREL------GRIVIKPSGVDYDELTPENMVVTDLDGNVVEGD-LNP- 73 (234)
T ss_pred cHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEecCC------CEEEEeCCCCCcccCCHHHEEEECCCCCCcCCC-CCc-
Confidence 367899999999999999999999999999998763 489999999999999999999999999999986 355
Q ss_pred CCCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCC----
Q 010305 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT---- 180 (513)
Q Consensus 106 ~~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~---- 180 (513)
|+|+.||+.||+.| |++||||+||||+++||+++. ++|.........+.| .||+++|.
T Consensus 74 -------SsE~~lH~~IY~~rpdv~AVvHtH~~~ata~a~~~~---~lp~~~~~~~~~~~g-------~vp~~~~~~~~~ 136 (234)
T PRK13145 74 -------SSDLPTHVELYKAWPEVGGIVHTHSTEAVGWAQAGR---DIPFYGTTHADYFYG-------PIPCARSLTKDE 136 (234)
T ss_pred -------cccHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHcCC---CCCCchhHHHHHhCC-------CcccccccCccc
Confidence 89999999999999 999999999999999999874 344321111112322 38888763
Q ss_pred ---CCchHHHHHHHHHHhhCC----CceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccc
Q 010305 181 ---AYENELTDSLAKAIDAYP----KATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTR 253 (513)
Q Consensus 181 ---~~~~~la~~v~~~l~~~~----~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~ 253 (513)
+...++++.+++++++.+ +.+++||+|||+++||+|+++||.+++.+|++|++++.++++|......++++++
T Consensus 137 ~~~~~~~~~~~~va~~l~~~~~~~~~~~avLL~nHG~v~~G~~l~eA~~~~e~lE~~A~~~~~a~~lg~~~~~~~~~~~~ 216 (234)
T PRK13145 137 VNGAYEKETGSVIIEEFEKRGLDPMAVPGIVVRNHGPFTWGKNPEQAVYHSVVLEEVAKMNRLTEQINPRVEPAPQYIMD 216 (234)
T ss_pred cccccchhhHHHHHHHHhhhccccccCCEEEEcCCCeeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHH
Confidence 235578889999987621 2479999999999999999999999999999999999999999444344444554
Q ss_pred cc
Q 010305 254 NF 255 (513)
Q Consensus 254 ~~ 255 (513)
++
T Consensus 217 ~~ 218 (234)
T PRK13145 217 KH 218 (234)
T ss_pred HH
Confidence 44
No 16
>PRK06755 hypothetical protein; Validated
Probab=100.00 E-value=9.5e-42 Score=321.10 Aligned_cols=200 Identities=20% Similarity=0.294 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCCCCC
Q 010305 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH 107 (513)
Q Consensus 28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p~~~ 107 (513)
-+.|++|++++|.++++||+.+++||+|+|.+++ ...|+|||||.++++|+|+||++||++|+++.+.+.||
T Consensus 5 ~~~~~~l~~~~~~l~~rGw~~gtsGNlSv~~~~~-----~~~~~ITpSG~~k~~L~~eDiv~vd~~g~~~~~~~~kP--- 76 (209)
T PRK06755 5 LKKWNELKDVKSELALRDWFYGTKISLSLCTSKE-----PLTFLVNVEGRDKGLFSEEDFIVVNCMCEPVFENEEKP--- 76 (209)
T ss_pred HHHHHHHHHHHHHHHHCCCCccCCCCeEEEecCC-----CcEEEEeCCCCCcccCCcccEEEEeCCCCCccCCCCCc---
Confidence 4568999999999999999999999999987653 13699999999999999999999999999884332455
Q ss_pred CCCCCCCchHHHHHHHHhcCccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCC-CCchHH
Q 010305 108 KPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYENEL 186 (513)
Q Consensus 108 ~p~~~S~E~~lH~~iy~~~d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~~l 186 (513)
|+|+.||+.||+.++++||||+||+|++++|+.......+|+...++++.+++ .+-....||++||. +++.++
T Consensus 77 -----SsE~~~H~~IY~~~~~~AVvHtHs~~at~ls~~~~~~~~i~~~~~e~~~~~g~-~~~~~~~IPiv~~~~~~~~~l 150 (209)
T PRK06755 77 -----AAESFMHADIYKKSSAECILQVQTVDSHLISELYGEEGEVTFDKRSVERVFGK-EGITEMTIPIVEDEKKFADLL 150 (209)
T ss_pred -----CccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHhhccCCcccccchHHHHHhcc-cCCCceEEEEEeCCCchhHHH
Confidence 99999999999988999999999999999999832223366556677777643 22222249999986 567888
Q ss_pred HHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 010305 187 TDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW 244 (513)
Q Consensus 187 a~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~ 244 (513)
++.+++.+++ .++|||+|||+++||+|+.+|+.++|.+|++|++++.++++++.+
T Consensus 151 a~~~~~~~~~---~~avLl~~HGv~~~G~~l~eA~~~~E~lE~l~~~~~~~~~l~~~~ 205 (209)
T PRK06755 151 ENNVPNFIEG---GGVVLVHNYGMIVWGKTPEEAKKWLEGIEYLMNYHVKLLMIKGAK 205 (209)
T ss_pred HHHHHhhccC---CCEEEEcCCCeEEEcCCHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9888888865 699999999999999999999999999999999999999877654
No 17
>PRK06486 hypothetical protein; Provisional
Probab=100.00 E-value=2.7e-42 Score=337.18 Aligned_cols=209 Identities=17% Similarity=0.220 Sum_probs=177.2
Q ss_pred HhcccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCC
Q 010305 22 LEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPS 101 (513)
Q Consensus 22 ~~~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~ 101 (513)
+.+.+++++|++|++++|+++++||+.+++||||+|++++ .+.|||||||.++++|+++||++||++|++++|.
T Consensus 19 ~~~~~~~~~r~~l~~~~r~l~~~Gl~~gt~GNiSvR~~~~-----~~~~lITPsG~~~~~lt~eDlv~vd~dG~~veg~- 92 (262)
T PRK06486 19 LDSDAVAQARVDLAACFRAAARHGLEEGICNHFSAVLPGH-----DDLFLVNPYGYAFSEITASDLLICDFDGNVLAGR- 92 (262)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCCccccCceEEEEecCC-----CCEEEEcCCCCCcccCcHHHeEEECCCCCCcCCC-
Confidence 4555678899999999999999999999999999999762 2479999999999999999999999999999986
Q ss_pred CCCCCCCCCCCC-CchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeec-
Q 010305 102 PKPYPHKPPKCS-DCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIE- 178 (513)
Q Consensus 102 ~~p~~~~p~~~S-~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~- 178 (513)
.+| | +|+.||+.||+.| |++||||+||+|++++|+... .++++..+++.+ +.| .||+++
T Consensus 93 ~kP--------s~~e~~lH~~IYr~rpDv~aVvHtHs~~a~a~s~~~~--~~l~~~~~~~~~-~~g-------~i~~~~~ 154 (262)
T PRK06486 93 GEP--------EATAFFIHARIHRAIPRAKAAFHTHMPYATALSLTEG--RPLTTLGQTALK-FYG-------RTAVDED 154 (262)
T ss_pred CCC--------ChhHHHHHHHHHHhCCCCCEEEEeCChHHhhhhhcCC--CCCCcccHHHHH-HCC-------CeeeccC
Confidence 355 5 5699999999999 999999999999999999842 234444454443 222 377776
Q ss_pred C--CCCchHHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccccc
Q 010305 179 N--TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (513)
Q Consensus 179 ~--~~~~~~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (513)
| .+.+.++++.+++++++ .++|||+|||+++||+|+++|+.+++++|++|++++.++++|.+...++++..+++.
T Consensus 155 ~~~~~~s~ela~~va~al~~---~~avLL~nHG~v~~G~~l~eA~~~~~~lE~~a~i~~~a~~~G~~~~~~~~~~~~~~~ 231 (262)
T PRK06486 155 YNGLALDAAEGDRIARAMGD---ADIVFLKNHGVMVCGPRIAEAWDDLYYLERACEVQVLAMSTGRPLVPVDPAIAAAVA 231 (262)
T ss_pred CCCccCchhHHHHHHHHhCc---CCEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 3 24678999999999986 699999999999999999999999999999999999999999876666776666664
Q ss_pred c
Q 010305 257 L 257 (513)
Q Consensus 257 ~ 257 (513)
+
T Consensus 232 ~ 232 (262)
T PRK06486 232 R 232 (262)
T ss_pred H
Confidence 4
No 18
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=100.00 E-value=4.2e-42 Score=327.73 Aligned_cols=198 Identities=19% Similarity=0.210 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCCCC
Q 010305 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (513)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p~~ 106 (513)
..++|++|++++|+++++||+.+++||||+|+++ .|||||||+++++|+++||++||++|++++|. +|
T Consensus 2 ~~~~~~~i~~~~~~l~~~Gl~~g~~GNiS~R~~~--------~~lItPsG~~~~~l~~~div~vd~~G~~~~g~--kp-- 69 (214)
T TIGR01086 2 RRELSQRIIDTCLEMTTLGLNQGTAGNVSVRRYQ--------GMLITPTGGPYYEKLTESIVYVIDGGGKEEEK--LP-- 69 (214)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCcceEEEECCC--------CEEEECCCCCcccCCHHHEEEEcCCCCCCCCC--CC--
Confidence 4678999999999999999999999999999876 49999999999999999999999999999873 56
Q ss_pred CCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCC-CCch
Q 010305 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (513)
Q Consensus 107 ~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~ 184 (513)
|+|+.||..||+.+ |++||||+||||++++++... ++|....++....++ .||+++|. +++.
T Consensus 70 ------sse~~~H~~iy~~rpdv~avvH~H~~~~~~~~~~~~---~lp~~~~~~~~~~~~-------~i~~v~y~~~gs~ 133 (214)
T TIGR01086 70 ------SSEWWFHLMAYYQRRPDNAVVHNHHIVCATASILLK---RIPAIHYMVAASGGG-------NIPCVPYATFGST 133 (214)
T ss_pred ------ChhHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHcCC---CCCcchHHHHHhcCC-------CccccCCCCCChH
Confidence 89999999999999 999999999999999998864 344444444432111 38999986 6899
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccc
Q 010305 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNF 255 (513)
Q Consensus 185 ~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~ 255 (513)
++++.+++.+++ .++|||+|||+++||+|+++|+.+++.+|++|++++.++.+|+.....++++++++
T Consensus 134 ~la~~v~~~~~~---~~~vLL~nHG~~~~G~~l~eA~~~~e~lE~~a~~~~~a~~~g~~~~~l~~~~~~~~ 201 (214)
T TIGR01086 134 KLASEVVAGILK---SKAILLLHHGLIIACENLLKALWLAAEVEVLAAQYLKTLLAITDPPPLLSDEMIVV 201 (214)
T ss_pred HHHHHHHHHhhh---CCEEehhcCCCEEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCHHHHHHH
Confidence 999999999986 68999999999999999999999999999999999999988863334455566655
No 19
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional
Probab=100.00 E-value=2.3e-41 Score=319.87 Aligned_cols=201 Identities=24% Similarity=0.445 Sum_probs=171.6
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCC
Q 010305 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (513)
Q Consensus 25 ~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p 104 (513)
|.+++.+++|++++|+++++||+.+++||||+|++++ .|||||||.++++|+++||++||++|++++|. .+|
T Consensus 1 ~~~~~~~~~l~~~~r~l~~~Gl~~~~~GNiSvr~~~~-------~~lItpsG~~~~~l~~~di~~vd~~g~~~~~~-~~P 72 (204)
T PRK09220 1 MTLEELLQQLIAAGRWIGARGWVPATSGNMSVRLDEQ-------HCAITVSGKDKGSLTAEDFLQVDIAGNAVPSG-RKP 72 (204)
T ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEcCCC-------EEEEECCCCChhHCChhhEEEEcCCCCCCCCC-CCc
Confidence 4578899999999999999999999999999999763 79999999999999999999999999998864 355
Q ss_pred CCCCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccc-cceeeeecCCCC
Q 010305 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYD-ELVVPIIENTAY 182 (513)
Q Consensus 105 ~~~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~vpv~~~~~~ 182 (513)
|+|+.||+.||++| |++||+|+||||++++|+.... ..++...+++.+.++|.++.. ...||++++.++
T Consensus 73 --------s~E~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~vp~~~~~~~ 143 (204)
T PRK09220 73 --------SAETLLHTQLYRLFPEIGAVLHTHSVNATVLSRVEKS-DALVLEGYELQKAFAGQTTHETAVVVPIFDNDQD 143 (204)
T ss_pred --------ChhHHHHHHHHHhCCCCcEEEecCcHHHHHHHhhcCC-CeeeecChhHHHHhCCCcccCCeeEEeeecCCCC
Confidence 89999999999999 9999999999999999998642 235555556665554432211 124787765557
Q ss_pred chHHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 010305 183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 242 (513)
Q Consensus 183 ~~~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~ 242 (513)
+.++++.++++|++++..+++||+|||+++||+|+++|+.++|.+|+.|++.+.+++++.
T Consensus 144 ~~eLa~~v~~~l~~~~~~~avlL~nHGvi~~G~~~~eA~~~~e~lE~~~~~~~~~~~~~~ 203 (204)
T PRK09220 144 IARLAARVAPYLDAQPLRYGYLIRGHGLYCWGRDMAEARRHLEGLEFLFECELERRLLEA 203 (204)
T ss_pred HHHHHHHHHHHHHhCCCCcEEEECCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 899999999999986444699999999999999999999999999999999999998764
No 20
>PRK07090 class II aldolase/adducin domain protein; Provisional
Probab=100.00 E-value=6e-42 Score=334.39 Aligned_cols=218 Identities=17% Similarity=0.202 Sum_probs=175.2
Q ss_pred cchhHHHHhcccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCC
Q 010305 15 ATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNG 94 (513)
Q Consensus 15 ~~~~~~~~~~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g 94 (513)
||.+++-..+.+++.+|++|++++|+++++||+.+++||||+|++++ +.|||||||+++++|+++||++||++|
T Consensus 16 ~~~~~~~~~~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GNiS~R~~~~------~~~lItPsG~~~~~lt~~Div~vd~dG 89 (260)
T PRK07090 16 AQRQMDNELKDSGWTLRQKLALTCRILFDAGHDSGLAGQITARAEAP------GTYYTQRLGLGFDEITASNLLLVDEDL 89 (260)
T ss_pred HHHHHhhhcCHHHHHHHHHHHHHHHHHHHcCCcccCCceEEEEeCCC------CEEEEeCCCCChhhCCHHHeEEECCCC
Confidence 33344444444577899999999999999999999999999999763 479999999999999999999999999
Q ss_pred CeecCCCCCCCCCCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccce
Q 010305 95 TTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELV 173 (513)
Q Consensus 95 ~~~~g~~~~p~~~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 173 (513)
++++|. .+| |+|+.||+.||+.| |++||||+||||++++|+.+. +++..++..........+++ .
T Consensus 90 ~~v~G~-~kP--------s~E~~lH~~IYr~rPDv~AVvHtH~p~ata~s~~~~---~l~~~~~~~~~~~~~~~~~~--~ 155 (260)
T PRK07090 90 NVLDGE-GMP--------NPANRFHSWIYRARPDVNCIIHTHPPHVAALSMLEV---PLVVSHMDTCPLYDDCAFLK--D 155 (260)
T ss_pred CCCCCC-CCC--------ChhHHHHHHHHHhCCCCCEEEEeCCHHHHHHHhcCC---CCCccchhHHhhccceeecc--C
Confidence 999985 355 89999999999999 999999999999999999864 34332222111111111111 1
Q ss_pred eeeecCCCCchHHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccc
Q 010305 174 VPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTR 253 (513)
Q Consensus 174 vpv~~~~~~~~~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~ 253 (513)
+|.+ |.+.++++.++++|++ ++++||+|||++++|+|+.+||.+++++|++|++++.++++|.+..+++ ++++
T Consensus 156 ~~~i---p~~~~~a~~va~~l~~---~~avLL~nHGvi~~G~~l~eA~~~~~~LE~~A~i~l~a~~~G~~~~l~~-e~~~ 228 (260)
T PRK07090 156 WPGV---PVGNEEGEIISAALGD---KRAILLSHHGQLVAGKSIEEACVLALLIERAARLQLLAMAAGPIKPIPP-ELAR 228 (260)
T ss_pred cCCc---CCChHHHHHHHHHhcc---CCEEEECCCCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCH-HHHH
Confidence 2333 3355679999999987 6899999999999999999999999999999999999999998776544 5888
Q ss_pred cccccc
Q 010305 254 NFKLGL 259 (513)
Q Consensus 254 ~~~~~~ 259 (513)
++++.+
T Consensus 229 ~~~~~~ 234 (260)
T PRK07090 229 EAHDWI 234 (260)
T ss_pred HHHHhh
Confidence 876655
No 21
>PRK06208 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-41 Score=332.71 Aligned_cols=207 Identities=16% Similarity=0.215 Sum_probs=175.0
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCCC
Q 010305 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY 105 (513)
Q Consensus 26 ~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p~ 105 (513)
+.+..+++|++++|.++++||+.+++||||+|++++ .+.|||||||.++++|+++||++||++|++++|. +|+
T Consensus 39 ~~~~~~~~l~~~~r~l~~~Gl~~g~~GNIS~R~~~~-----~~~~lITPsG~~~~~lt~eDiv~vd~dG~~v~G~--~ps 111 (274)
T PRK06208 39 ERLHRKQRLAAAFRLFARFGFDEGLAGHITARDPEL-----PDHFWVNPLGVHFSQIKVSDLLLVDHDGEVVEGD--RPL 111 (274)
T ss_pred HHHHHHHHHHHHHHHHHHcCCccccCceEEEEccCC-----CCeEEEcCCCCChhhCcHHHeEEECCCCCCcCCC--CCC
Confidence 456789999999999999999999999999999752 2489999999999999999999999999999885 452
Q ss_pred CCCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCCC---
Q 010305 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA--- 181 (513)
Q Consensus 106 ~~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~--- 181 (513)
+++|+.||+.||+.| |++||||+||||++++|+.+.. ++....+.. .+.| .||++++..
T Consensus 112 ------~~sE~~lH~~IYr~rpDv~AViHtHpp~ata~s~~~~~---l~~i~~~~~-~~~~-------~ip~~~~~~g~~ 174 (274)
T PRK06208 112 ------NRAAFAIHSAIHEARPDVVAAAHTHSTYGKAWSTLGRP---LDPITQDAC-AFYE-------DHALFDDFTGVV 174 (274)
T ss_pred ------CHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHhCCC---CChhhHHHH-HHcC-------CceeccCCCCcc
Confidence 146899999999999 9999999999999999998743 333333332 2322 378876532
Q ss_pred CchHHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccccccccC
Q 010305 182 YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLGLG 260 (513)
Q Consensus 182 ~~~~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~~~~ 260 (513)
++.++++.+++.|++ +++|||+|||+++||+|+.+|+.+++.+|++|++++.++++|.+.. ++++++++.++.+.
T Consensus 175 ~s~ela~~va~~l~~---~~avLL~NHGvv~~G~tl~eA~~~~e~lE~aA~i~l~a~~~G~~~~-L~~e~~~~~~~~~~ 249 (274)
T PRK06208 175 VDTSEGRRIAAALGT---HKAVILQNHGLLTVGPSVDAAAWWFIALERACQTQLLAEAAGPPQP-IDHETARHTRSQVG 249 (274)
T ss_pred CchHHHHHHHHHhcc---CCEEEECCCCceEeeCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcC-CCHHHHHHHHHHhc
Confidence 488999999999987 6999999999999999999999999999999999999999997765 45568888777663
No 22
>PRK07044 aldolase II superfamily protein; Provisional
Probab=100.00 E-value=2e-41 Score=330.41 Aligned_cols=209 Identities=16% Similarity=0.217 Sum_probs=174.9
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCC
Q 010305 24 GRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPK 103 (513)
Q Consensus 24 ~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~ 103 (513)
+.+++++|++|+++||+++++||+.+++||||+|++++ .+.|||||||+++++|+++||++||++|++++|.. +
T Consensus 11 ~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GNiSvR~~~~-----~~~~lITpsG~~~~~l~~~div~vd~~g~~veg~~-~ 84 (252)
T PRK07044 11 SPAEWQARVDLAAAYRLVALLGWDDLIYTHISARVPGE-----EHHFLINPYGLLFDEITASNLVKIDLDGNVVDDSP-Y 84 (252)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCccccCcEEEEEccCC-----CCeEEEcCCCCChhhcCHHHeEEECCCCCCcCCCC-C
Confidence 44588999999999999999999999999999999752 24799999999999999999999999999998752 2
Q ss_pred CCCCCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCC--
Q 010305 104 PYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-- 180 (513)
Q Consensus 104 p~~~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-- 180 (513)
| ++++|+.||+.||+.| |++||||+||+|++++|++.... .|+.+. ... +.| .||+.+|.
T Consensus 85 ~------~~pse~~lH~~iY~~rpdv~aViHtH~~~a~a~s~~~~~~--~p~~~~-~~~-~~g-------~i~~~~y~~~ 147 (252)
T PRK07044 85 P------VNPAGFTIHSAIHAARPDAHCVMHTHTTAGVAVSAQRDGL--LPLSQH-ALQ-FYG-------RLAYHDYEGI 147 (252)
T ss_pred C------CChHHhHHHHHHHHhCCCCcEEEEECCHHHHHHHHhCCCC--CcchHh-HHH-HcC-------CceeeCCCCC
Confidence 2 1146999999999999 99999999999999999986432 233333 222 222 38888885
Q ss_pred CCchHHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccccccc
Q 010305 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLG 258 (513)
Q Consensus 181 ~~~~~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~~ 258 (513)
+.+.++++.+++.+++ .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+..+++++..+..++-
T Consensus 148 ~~~~e~~~~va~~l~~---~~avLL~nHGvi~~G~~l~eA~~~~e~lE~~a~~~~~a~~lG~~~~~~~~~~~~~~~~~ 222 (252)
T PRK07044 148 ALDLDEGERLVADLGD---KPAMLLRNHGLLTVGRTVAEAFLLMYTLERACEIQVAAQAGGGELVLPPPEVAERTARQ 222 (252)
T ss_pred cCCHHHHHHHHHHhcc---CCEEEECCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 3478889999999986 69999999999999999999999999999999999999999987667777555555443
No 23
>PRK06661 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-41 Score=325.15 Aligned_cols=196 Identities=15% Similarity=0.156 Sum_probs=165.6
Q ss_pred HHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCCCCCC
Q 010305 29 ETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHK 108 (513)
Q Consensus 29 ~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p~~~~ 108 (513)
++|++|++++|.|+++||+.+++||||+|++++ +.|||||||.++++|+++||++||++|++++|.. +|
T Consensus 2 ~~r~~l~~a~r~l~~~Gl~~g~~GNiS~R~~~~------~~~lItPsG~~~~~l~~~div~vd~dG~~~~g~~-~~---- 70 (231)
T PRK06661 2 DIKYNLAAAYRIMAYLSLDDHTYTHLSARPKNA------DFYYIYPFGLRFEEVTTENLLKVSLDGQILEGEE-YQ---- 70 (231)
T ss_pred cHHHHHHHHHHHHHHcCCcccCCceEEEEeCCC------CEEEEeCCCCChhhCcHHHeEEECCCCCCcCCCC-CC----
Confidence 469999999999999999999999999998763 4799999999999999999999999999998752 22
Q ss_pred CCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCC-CCc--h
Q 010305 109 PPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYE--N 184 (513)
Q Consensus 109 p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~--~ 184 (513)
.+|+|+.||..||+.| |++||||+||||++++|+.+.... |+.+..+ . +.+ .||+.+|. +.. .
T Consensus 71 --~~sse~~lH~~IY~~rpdv~aVvH~H~~~a~a~s~~~~~~~--p~~~~~~-~-~~~-------~i~~~~~~~~~~~~~ 137 (231)
T PRK06661 71 --YNKTGYFIHGSIYKTRPDISAIFHYHTPASIAVSALKCGLL--PISQWAL-H-FYD-------RISYHNYNSLALDAD 137 (231)
T ss_pred --CChhHHHHHHHHHHcCCCCCEEEEECChHHHHHHhcCCCCC--CccHhHH-H-HcC-------CceecCCCccccCch
Confidence 1267999999999999 999999999999999999975322 3333322 1 222 38888764 333 6
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCCc
Q 010305 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL-GLDWSTPNHGP 251 (513)
Q Consensus 185 ~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~-g~~~~~~~~~~ 251 (513)
++++.+++++++ .+++||+|||+++||+|+++|+.+++++|++|++++.++++ |.+..+++++.
T Consensus 138 ~~~~~~a~~l~~---~~avll~nHG~v~~G~sl~eA~~~~~~lE~~a~~~~~a~~~~g~~~~l~~~~~ 202 (231)
T PRK06661 138 KQSSRLVNDLKQ---NYVMLLRNHGAITCGKTIHEAMFYTYHLEQACKTQCLLNSTKKQELIIPSVEI 202 (231)
T ss_pred hHHHHHHHHhCC---CCEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 789999999986 69999999999999999999999999999999999999999 77766666533
No 24
>PRK06357 hypothetical protein; Provisional
Probab=100.00 E-value=5.8e-41 Score=318.93 Aligned_cols=194 Identities=18% Similarity=0.254 Sum_probs=163.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCC---CCCCCCCCEEEEe-CCCCeecCCCC
Q 010305 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQ---KERMEPEDMYVLS-GNGTTLSSPSP 102 (513)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~---~~~l~~~div~vd-~~g~~~~g~~~ 102 (513)
.+++|++|+++||+++++||+.+++||||+|++++ .+.+.|||||||++ +++|+++||++|| .+|++++|. .
T Consensus 3 ~~~~r~~l~~~~r~l~~~Gl~~gt~GNiS~R~~~~---~~~~~~~ITpsg~~g~~~~~lt~~Div~vd~~~g~~~~g~-~ 78 (216)
T PRK06357 3 FQKEREDLAKVVKTMFDRKETNAAGGNISVRMTAE---KNKEYIIMTPTLMSEAKLCDLSPYQILVVDLNTGEVIEGV-G 78 (216)
T ss_pred hHHHHHHHHHHHHHHHHcCCCccCCCEEEEEeccc---CCCCeEEEeCCCCCccccccCCHHHEEEEecCCCeEcCCC-C
Confidence 56789999999999999999999999999999420 00248999999874 9999999999999 589999885 3
Q ss_pred CCCCCCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCC-
Q 010305 103 KPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT- 180 (513)
Q Consensus 103 ~p~~~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~- 180 (513)
+| |+|+.||+.||+.| |++||||+||+|++++++.+.. +|... +....+ | .||++||.
T Consensus 79 kP--------SsE~~lH~~IY~~rpdv~aVvH~H~~~ata~a~~~~~---lp~~~-~~~~~~-g-------~i~~~p~~~ 138 (216)
T PRK06357 79 RV--------TREINMHEAAYVANPKIKCVYHSHAKESMFWATLGLE---MPNLT-EATQKL-G-------KIPTLPFAP 138 (216)
T ss_pred CC--------ChhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCcc-HHHHhc-C-------CcceecccC
Confidence 55 99999999999999 9999999999999999988643 33322 222222 2 38899885
Q ss_pred CCchHHHHHHHHHHhhCC---CceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 010305 181 AYENELTDSLAKAIDAYP---KATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW 244 (513)
Q Consensus 181 ~~~~~la~~v~~~l~~~~---~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~ 244 (513)
+++.++++.+++++++.+ ..+++||+|||+++||+|+.+||.+++++|++|++++.+++++...
T Consensus 139 ~gs~ela~~v~~~l~~~~~~~~~~~vLl~nHGvv~~G~~l~eA~~~~e~lE~~a~i~~~a~~l~~~~ 205 (216)
T PRK06357 139 ATSPELAEIVRKHLIELGDKAVPSAFLLNSHGIVITDTSLHKAYDILETIEWNAYIAYQATVFDKLG 205 (216)
T ss_pred CCcHHHHHHHHHHHhhcCcccCCCEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 689999999999997532 1379999999999999999999999999999999999999988643
No 25
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=6.1e-41 Score=312.63 Aligned_cols=179 Identities=25% Similarity=0.326 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCCCCC
Q 010305 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH 107 (513)
Q Consensus 28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p~~~ 107 (513)
.++|++|++++|+++++||+.+++||||+|+++ .|||||||.++++++++||++||++|++++|. +|
T Consensus 2 ~~~~~~l~~~~~~~~~~gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~di~~vd~~g~~~~g~--~P--- 68 (184)
T PRK08333 2 RNVKAQLVKYSKLAHERGLTAAFGGNLSIRVGN--------LVFIKATGSVMDELTREQVAVIDLNGNQLSSV--RP--- 68 (184)
T ss_pred hHHHHHHHHHHHHHHHCCCCcCCCCeEEEEeCC--------EEEEeCCCCCcccCCHHHEEEECCCCCCCCCC--CC---
Confidence 468999999999999999999999999999975 79999999999999999999999999998773 55
Q ss_pred CCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHH-hhcCCCcccccchHHHHhhhcCCcccccceeeeecCC-CCch
Q 010305 108 KPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVT-MINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (513)
Q Consensus 108 ~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~ 184 (513)
|+|+.+|..||+.| |++||+|+||||++++| +.+. ++|....+... +.+ .||++||. +++.
T Consensus 69 -----s~e~~lH~~iyr~rpdv~aViHtH~~~a~a~s~~~~~---~~p~~~~~~~~-~~~-------~v~v~~~~~~g~~ 132 (184)
T PRK08333 69 -----SSEYRLHLAVYRNRPDVRAIAHLHPPYSIVASTLLEE---ELPIITPEAEL-YLK-------KIPILPFRPAGSV 132 (184)
T ss_pred -----ChhHHHHHHHHHhCCCCCEEEeCCcHHHHHHHHHcCC---CCCCccHHHHH-hCC-------CEeeecCCCCCcH
Confidence 89999999999999 99999999999999999 5553 34433333322 222 39999996 6899
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHH
Q 010305 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLH 238 (513)
Q Consensus 185 ~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~ 238 (513)
++++.++++|++ .+++||+|||+++||+|+++|+.+++.+|++|++++.+.
T Consensus 133 ~la~~~~~~l~~---~~~vll~nHGv~~~G~~~~eA~~~~e~lE~~A~~~~~~~ 183 (184)
T PRK08333 133 ELAEQVAEAMKE---YDAVIMERHGIVTVGRSLREAFYKAELVEESAKLWYLKF 183 (184)
T ss_pred HHHHHHHHHhcc---CCEEEEcCCCCEEEcCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999986 699999999999999999999999999999999998764
No 26
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=100.00 E-value=7.8e-41 Score=313.92 Aligned_cols=190 Identities=37% Similarity=0.720 Sum_probs=164.4
Q ss_pred HHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCCCCCCCCCCC
Q 010305 34 ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCS 113 (513)
Q Consensus 34 l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p~~~~p~~~S 113 (513)
|++++|+++++||+.+++||||+|++++ .|||||||.++++++++||++||++|++++|. .+| |
T Consensus 1 i~~~~r~l~~~Gl~~~~~GniS~r~~~~-------~~lItpsg~~~~~l~~~di~~v~~~g~~~~g~-~~p--------s 64 (193)
T TIGR03328 1 LIEAGRDLYKRGWVPGTGGNLSARLDED-------EILITPSGVDKGRLTPEDFLVVDLQGKPVSGG-LKP--------S 64 (193)
T ss_pred CHHHHHHHHHcCCCccCCCEEEEEcCCC-------EEEEeCCCCChhhCCcceEEEEcCCCCCCCCC-CCC--------C
Confidence 5789999999999999999999999763 79999999999999999999999999999875 345 8
Q ss_pred CchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCc-ccccceeeeecCCCCchHHHHHHH
Q 010305 114 DCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHG-YYDELVVPIIENTAYENELTDSLA 191 (513)
Q Consensus 114 ~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~vpv~~~~~~~~~la~~v~ 191 (513)
+|+.+|+.||+.| |++||+|+||+|++++|+.......++...+++++.+.|.. |.+...||++++.|++.++++.++
T Consensus 65 ~e~~~H~~iy~~~pdv~aVvH~H~~~a~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~vp~~~~~~gs~ela~~~~ 144 (193)
T TIGR03328 65 AETLLHTQLYRLTPGAGAVLHTHSVEATVLSRLYPSNGAFELEGYEMLKALPGITTHEDKLTIPIFENTQDIARLADSVA 144 (193)
T ss_pred cHHHHHHHHHHhCCCCeEEEEcCCHHHHHHHhhcccCCeeeccchhhhhhhCCCcCCCCceEEeeecCCCChHHHHHHHH
Confidence 9999999999999 99999999999999999885432246666676765543321 111124999998889999999999
Q ss_pred HHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHh
Q 010305 192 KAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQ 239 (513)
Q Consensus 192 ~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~ 239 (513)
++++++++.++|||+|||+++||+|+++|+.++|.+|++|++.+.++.
T Consensus 145 ~~l~~~~~~~avll~nHGv~~~G~~~~~A~~~~e~lE~~a~~~~~~~~ 192 (193)
T TIGR03328 145 PYLEAYPDVPGVLIRGHGLYAWGRDWEEAKRHLEALEFLFECELEMLK 192 (193)
T ss_pred HHHhcCCCCCEEEEcCCcceEEcCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999865668999999999999999999999999999999999998865
No 27
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=2.7e-40 Score=307.42 Aligned_cols=180 Identities=18% Similarity=0.297 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCCCCCCC
Q 010305 30 TRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKP 109 (513)
Q Consensus 30 ~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p~~~~p 109 (513)
+|++|++++|+++++||+.+++||||+|+++ .|||||||.++++++++||++||++|+.. +. .+|
T Consensus 1 ~~~~l~~~~~~l~~~gl~~~~~GniS~R~~~--------~~lItpsg~~~~~l~~~dlv~vd~~g~~~-~~-~~p----- 65 (181)
T PRK08660 1 MWQEFARIGKKLFAHGLVSSHFGNISVRTGD--------GLLITRTGSMLDEITEGDVIEVGIDDDGS-VD-PLA----- 65 (181)
T ss_pred CHHHHHHHHHHHHHCCCcccCCceeEEEcCC--------EEEEeCCCCCcccCChhHEEEEcCCCCcc-CC-CCC-----
Confidence 3899999999999999999999999999854 89999999999999999999999999875 32 344
Q ss_pred CCCCCchHHHHHHHHhcCccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCCCCchHHHHH
Q 010305 110 PKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDS 189 (513)
Q Consensus 110 ~~~S~E~~lH~~iy~~~d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~~~~~la~~ 189 (513)
|+|+.||+.||+.+|++||+|+||+|++++|+... +++....+... +.+ .||++...+++.++++.
T Consensus 66 ---s~E~~lH~~iy~~~dv~aVvH~H~~~~~a~s~~~~---~l~~~~~~~~~-~~~-------~ipv~~~~~~~~~la~~ 131 (181)
T PRK08660 66 ---SSETPVHRAIYRRTSAKAIVHAHPPYAVALSLLED---EIVPLDSEGLY-FLG-------TIPVVGGDIGSGELAEN 131 (181)
T ss_pred ---CccHHHHHHHHcCCCCCEEEEeCChHHHHHHHcCC---CCCCcCHHHHH-hcC-------CEeEEeCCCCCHHHHHH
Confidence 99999999999955999999999999999999864 33333333322 222 38998335789999999
Q ss_pred HHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCC
Q 010305 190 LAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241 (513)
Q Consensus 190 v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g 241 (513)
++++|++ .+++||+|||+++||+|+++|+.+++.+|++|++++.+++++
T Consensus 132 v~~~l~~---~~~vll~nHG~~~~G~~i~~A~~~~e~lE~~a~i~~~~~~l~ 180 (181)
T PRK08660 132 VARALSE---HKGVVVRGHGTFAIGKTLEEAYIYTSQLEHSCKVLYLVRTAK 180 (181)
T ss_pred HHHHHhh---CCEEEEcCCCceEeCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999997 699999999999999999999999999999999999998875
No 28
>COG0235 AraD Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-40 Score=315.33 Aligned_cols=194 Identities=29% Similarity=0.462 Sum_probs=170.9
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCC
Q 010305 24 GRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPK 103 (513)
Q Consensus 24 ~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~ 103 (513)
.+..+++|++|++++|.++.+||+.+++||||+|+++. ..|+|||||+.+++|+++|+++||+||++++|. .+
T Consensus 2 ~~~~~~~~~~l~~~~~~l~~~g~~~~t~GniS~r~~~~------~~~~ItpsG~~~~~lt~~dlv~vd~~G~~~~g~-~~ 74 (219)
T COG0235 2 SMMLEKLRQELAKAARLLARRGLVEGTAGNISVRLPEG------GLFLITPSGVPFGELTADDLVVVDLDGEVVEGG-KK 74 (219)
T ss_pred chhHHHHHHHHHHHHHHHHHcCCCCcCCceEEEEcCCC------ceEEEeCCCCccccCcHHHeEEEeCCCcEecCC-CC
Confidence 34578899999999999999999999999999999884 349999999999999999999999999999983 45
Q ss_pred CCCCCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccceeeeecCC-C
Q 010305 104 PYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-A 181 (513)
Q Consensus 104 p~~~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~ 181 (513)
| |+|+++|..||+.| |++||+||||+|+++||+.+. .++..+++....+++ .||+++|. +
T Consensus 75 p--------Sse~~~H~~iY~~rpd~~aVvHtHs~~a~als~~~~---~l~~~~~~~~~~~~~-------~i~~~~~~~~ 136 (219)
T COG0235 75 P--------SSETPIHLAIYRARPDAGAVVHTHSPYATALSTLGE---PLPPLGTEHLKYFGG-------GIPCAPYAGP 136 (219)
T ss_pred C--------chhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHhcC---CCCCCCHHHHHHcCC-------CcccccCCCC
Confidence 5 99999999999999 999999999999999999984 455556666655544 49999985 5
Q ss_pred CchHHHHHHHHHHhhCCCceEEE--EcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 010305 182 YENELTDSLAKAIDAYPKATAVL--VRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWS 245 (513)
Q Consensus 182 ~~~~la~~v~~~l~~~~~~~~vl--l~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~ 245 (513)
++.+++++++..... .+.++ |+|||+++||+|+.+|+.+++.+|++|++++.++++|.+..
T Consensus 137 ~~~~~~~~~~~~~~~---~~~~~~ll~~HG~~~~G~~l~eA~~~~~~lE~~a~~~~~~~~~~~~~~ 199 (219)
T COG0235 137 GSVELAEALAEAADL---AEAVLKLLRNHGVVAWGKTLAEAVHLAEVLEELAKLQLKALSLGKPLL 199 (219)
T ss_pred CchhhHHHHHHHHHH---HHHHHHHHHcCCcEEECCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 788888888887765 34555 99999999999999999999999999999999999999875
No 29
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=100.00 E-value=4.3e-40 Score=321.67 Aligned_cols=212 Identities=17% Similarity=0.231 Sum_probs=171.4
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCC-------------------CC-CccEEEEeccCCCCCCCCC---
Q 010305 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI-------------------PK-PQQLILMSPSGVQKERMEP--- 84 (513)
Q Consensus 28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~-------------------~~-~~~~~litpsG~~~~~l~~--- 84 (513)
..++++|++++++++++||+.+++||||+|++++++ +. .+++|+|||||.++++|++
T Consensus 7 ~~~~~~i~~~~~~l~~~Gl~~~~~GNiS~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lITpSG~~~~~l~~~~~ 86 (270)
T TIGR02624 7 SPFVQEMIKTTSDLWRLGWDERNGGNISLRLDEEEVAPYLDFHQVPRKIPLKFPAPELANKYFLVTGSGKFFRNVEENPA 86 (270)
T ss_pred HHHHHHHHHHHHHHHHcCCcCCCCCEEEEEcCccccchhhcccccccccccccccccccCCEEEEeCCCCCHHhcccCch
Confidence 568999999999999999999999999999976200 00 1247999999999999994
Q ss_pred CCE--EEEeCCCCeec------CCCCCCCCCCCCCCCCchHHHHH----HHHhc-CccEEEecCChHHHHHHhhcCCC-c
Q 010305 85 EDM--YVLSGNGTTLS------SPSPKPYPHKPPKCSDCAPLFMK----AYEKR-DAGAVIHSHGIESCLVTMINPMS-K 150 (513)
Q Consensus 85 ~di--v~vd~~g~~~~------g~~~~p~~~~p~~~S~E~~lH~~----iy~~~-d~~aVvH~H~~~~~a~s~~~~~~-~ 150 (513)
+|+ ++||.+|++++ +. .+| |+|++||+. ||+.| |++||||+||+|++++|+..... .
T Consensus 87 ~d~~iv~vd~~G~~~~~~~~~~~g-~kP--------SsE~~mH~~v~~~iy~~rpd~~AVvHtHp~~ata~s~~~~~~~~ 157 (270)
T TIGR02624 87 ENLGILRVSEDGASVHLLWGLTDG-GVP--------TSELPAHFMSHIARLKVDPENRVIMHCHATNLIAMTFTHELDEA 157 (270)
T ss_pred hceeEEEECCCCCEEEeeccccCC-CCc--------ChHHHHHHHHHHHHHHhCCCCCEEEccCcHHHHHHHccCcccch
Confidence 686 56899999987 22 245 999999996 69999 99999999999999999986411 1
Q ss_pred c----cccchHHHHhhhcCCcccccceeeeecCC-CCchHHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHH
Q 010305 151 E----FRITHMEMIKGIKGHGYYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAE 225 (513)
Q Consensus 151 ~----~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~ 225 (513)
. ++....++...+++ .||++||. |++.+|++++++.+++ +++|||+|||+++||+|+++||.++|
T Consensus 158 ~~~~~l~~~~~e~~~~~~~-------~i~vvp~~~pGs~eLA~~v~~~l~~---~~avLL~nHGvva~G~~l~eA~~~~E 227 (270)
T TIGR02624 158 VFTRTLWQMCTECLVVFPD-------GVGIIPWMVPGTNEIGEATAEKMKE---HRLVLWPHHGIFGAGPSLDETFGLIE 227 (270)
T ss_pred hccccccccccchhheeCC-------ccccccCcCCCCHHHHHHHHHHhcc---CCEEEEcCCCCeEecCCHHHHHHHHH
Confidence 1 11111122222322 38999995 7999999999999987 68999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcccccccc
Q 010305 226 CYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLG 258 (513)
Q Consensus 226 ~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~~ 258 (513)
.+|++|++++.++++|++....++++++++++.
T Consensus 228 ~lE~~A~i~~~a~~lg~~~~~L~~e~l~~~~~~ 260 (270)
T TIGR02624 228 TAEKSAEVYTKVYSQGGVKQTISDEQLIALAKR 260 (270)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 999999999999999976555677788887553
No 30
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=100.00 E-value=3.6e-40 Score=323.93 Aligned_cols=213 Identities=15% Similarity=0.198 Sum_probs=168.4
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCC---------------------CCccEEEEeccCCCCCCC--
Q 010305 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIP---------------------KPQQLILMSPSGVQKERM-- 82 (513)
Q Consensus 26 ~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~---------------------~~~~~~litpsG~~~~~l-- 82 (513)
..+.++++|++++|+++++||+.+++||||+|+++++++ ...+.|||||||++++++
T Consensus 5 ~~~~~~~~l~~~~~~l~~~Gl~~~~~GNiSvR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lITpSG~~~~~l~~ 84 (274)
T PRK03634 5 LDSWFVQGMIKVTSDLWLKGWDERNGGNISLRLTEEEVAPYGDDFHQQPRYIPLSQPMPELAGTYFLVTGSGKFFRNVQL 84 (274)
T ss_pred hhHHHHHHHHHHHHHHHHcCCccCCCCeEEEEcCchhhhhhhhccccccccccccccchhccCCEEEEeCCCcChhhhhc
Confidence 346789999999999999999999999999999762110 012489999999999999
Q ss_pred CCC-C--EEEEeCCCCeec---C--CCCCCCCCCCCCCCCchHHHHHHH----Hh-c-CccEEEecCChHHHHHHhhcCC
Q 010305 83 EPE-D--MYVLSGNGTTLS---S--PSPKPYPHKPPKCSDCAPLFMKAY----EK-R-DAGAVIHSHGIESCLVTMINPM 148 (513)
Q Consensus 83 ~~~-d--iv~vd~~g~~~~---g--~~~~p~~~~p~~~S~E~~lH~~iy----~~-~-d~~aVvH~H~~~~~a~s~~~~~ 148 (513)
+|+ | +++||.+|++++ | .+.+| |+|+.||+.|| +. | |++||+|+||+|++++|+...
T Consensus 85 ~p~dd~~lv~vd~~G~~~~~~~g~~~~~kP--------SsE~~lH~~IY~~~~~~~rpdv~AVvHtHs~~atals~~~~- 155 (274)
T PRK03634 85 DPAANLGVIRIDSDGAGYHILWGLTNGGKP--------TSELPAHLMSHIARLKATNGKDRVIMHCHATNLIALTYVLE- 155 (274)
T ss_pred CchhcCCEEEEcCCCCEeeeeccCCCCCCC--------chHHHHHHHHHHHHhhccCCCCcEEEecCchHHHHHHCcCC-
Confidence 554 5 668899998753 3 12244 99999999999 45 8 999999999999999999864
Q ss_pred Cc--ccccch----HHHHhhhcCCcccccceeeeecCC-CCchHHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHH
Q 010305 149 SK--EFRITH----MEMIKGIKGHGYYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAK 221 (513)
Q Consensus 149 ~~--~~~~~~----~~~~~~~~g~~~~~~~~vpv~~~~-~~~~~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~ 221 (513)
.+ .+.... .+....+++ .||++||. |++.++++++++++++ .++|||+|||+++||+|+++||
T Consensus 156 l~~~~~~~~~~~~~~e~~~~~~~-------~i~vvpy~~pgs~eLa~~v~~~l~~---~~avLL~nHGvv~~G~~l~eA~ 225 (274)
T PRK03634 156 LDEAVFTRTLWEMSTECLVVFPD-------GVGIVPWMVPGTDEIGQATAEKMQK---HDLVLWPKHGVFGSGPTLDEAF 225 (274)
T ss_pred cChHhhhhhhhhcCccceeEeCC-------ceeEecCCCCCCHHHHHHHHHHhcc---CCEEEEcCCCCeEecCCHHHHH
Confidence 11 110000 111111211 38999995 6999999999999986 6899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 010305 222 TQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (513)
Q Consensus 222 ~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (513)
.+++.+|++|++++.++++|......+++++++++.
T Consensus 226 ~~~e~lE~~a~i~l~a~~~G~~~~~l~~e~l~~l~~ 261 (274)
T PRK03634 226 GLIDTAEKSAEIYVKVLSMGGMKQTITDEELIALGE 261 (274)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 999999999999999999996444556668888754
No 31
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=100.00 E-value=1.2e-38 Score=297.96 Aligned_cols=178 Identities=33% Similarity=0.531 Sum_probs=150.0
Q ss_pred HHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCC-CCeecC-C-CCCCCCCC
Q 010305 32 VLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSS-P-SPKPYPHK 108 (513)
Q Consensus 32 ~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~-g~~~~g-~-~~~p~~~~ 108 (513)
++|++++|+++++||+.+++||||+|++++ .|||||||.++++++++||++||++ |++++| . +.
T Consensus 1 ~~l~~~~r~l~~~g~~~~~~GniS~R~~~~-------~~lit~sg~~~~~l~~~d~~~v~~~~g~~l~g~~~~~------ 67 (184)
T PF00596_consen 1 QELAEACRRLYERGLVDGTGGNISVRVPGD-------RFLITPSGVDKDELTPEDIVVVDLDDGNILEGDEGGG------ 67 (184)
T ss_dssp HHHHHHHHHHHHTTSSCTTBEEEEEEECTT-------EEEEEBTTS-GGGCTGGGEEEEETTTSEEEEESTTSS------
T ss_pred CHHHHHHHHHHHCCCcccCCCeEEEEecCC-------CEEEcCCCCChhhCChhhceEEeccccceeeccCCCC------
Confidence 689999999999999999999999999874 8999999999999999999999999 999976 1 12
Q ss_pred CCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhh-cCCCcccccchHHHHhhhcCCcccccceeeeecCC-CCchH
Q 010305 109 PPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMI-NPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYENE 185 (513)
Q Consensus 109 p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~~ 185 (513)
+||+|+.+|+.||+.| |++||+|+||++++++|++ +.. ++....+....+.+ ..||+++|. +++.+
T Consensus 68 --~ps~e~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~~~---l~~~~~~~~~~~~~------~~v~~~~~~~~~~~~ 136 (184)
T PF00596_consen 68 --KPSSETPLHAAIYRARPDVNAVIHTHPPYATALSCLAGEP---LPPITQEAARFYFG------GEVPVVPYAPPGSEE 136 (184)
T ss_dssp --CBCTTHHHHHHHHHHCTTSSEEEEE--HHHHHHHTSSTCC---CCSSSHHHHHTHTS------SCEEEE-THSTTCHH
T ss_pred --CCCHhHHHHhHHHcCCCCCCEEEecChHHHHhHHhhhhcc---cccchhhHHhhhcC------ccceeeccccccchh
Confidence 3399999999999999 9999999999999999988 643 33333344331211 149999995 58899
Q ss_pred HHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHH
Q 010305 186 LTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAI 235 (513)
Q Consensus 186 la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~ 235 (513)
+++.++++++. +.+++||+|||+++||+|+++|+.+++.+|++|++++
T Consensus 137 l~~~i~~~l~~--~~~~vll~nHG~~~~G~s~~~A~~~~~~lE~~a~~~l 184 (184)
T PF00596_consen 137 LAEAIAEALGE--DRKAVLLRNHGVVVWGKSLEEAFYRAEYLERAAEIQL 184 (184)
T ss_dssp HHHHHHHHHTC--TSSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcC--CceEEeecCCceEEEeCCHHHHHHHHHHHHHHHHHhC
Confidence 99999999992 3799999999999999999999999999999999986
No 32
>KOG2631 consensus Class II aldolase/adducin N-terminal domain protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-32 Score=247.00 Aligned_cols=210 Identities=58% Similarity=1.001 Sum_probs=191.4
Q ss_pred HHhcccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCC
Q 010305 21 YLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSP 100 (513)
Q Consensus 21 ~~~~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~ 100 (513)
+..+++.+..++-++++||.+|..||+.|+||-||++.++ .++|.|||+.++.|+|+|+.+.|++++.+..
T Consensus 11 ~i~~~~~~~p~~Li~eLc~qFY~lgWvtGTGgai~ik~~~--------ei~iaPSgVQKErm~peDlfv~~~~~~~~~~- 81 (238)
T KOG2631|consen 11 RIGSMDLEHPRNLICELCRQFYHLGWVTGTGGAISIKHGD--------EIYIAPSGVQKERMQPEDLFVMDLNTEYISV- 81 (238)
T ss_pred cccCCCccchHHHHHHHHHHHHhcCceeccCCeEEEeeCC--------eeEeCcchhhhhhCCccceEEEecCCceecc-
Confidence 4566778888999999999999999999999999999988 5899999999999999999999999977764
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHhcCccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcC--Cc----cccccee
Q 010305 101 SPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKG--HG----YYDELVV 174 (513)
Q Consensus 101 ~~~p~~~~p~~~S~E~~lH~~iy~~~d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g--~~----~~~~~~v 174 (513)
|+..++.++|..+++.+.+|..|++.||||||+..++..+++.. ...+.+++.|+++++.+ .+ |++...|
T Consensus 82 ---P~~~k~~k~s~CtpLF~~~y~~r~AgAvIHTHS~~Avl~t~L~~-~~~F~ith~EmIKgI~~~~~g~~~~y~D~L~v 157 (238)
T KOG2631|consen 82 ---PKPSKKLKPSQCTPLFMAAYTMRDAGAVIHTHSQAAVLATLLFP-SDEFRITHQEMIKGIPKGNSGGYLPYFDTLVV 157 (238)
T ss_pred ---CCCcCCCCccccHHHHHHHHHhcCCceEEEeccHHHHHHHhhcc-cceeEeehHHHHhcCCCCCCCccccccceEEE
Confidence 33446678899999999999999999999999999999999976 46788999999998754 33 6677789
Q ss_pred eeecCCCCchHHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 010305 175 PIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243 (513)
Q Consensus 175 pv~~~~~~~~~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~ 243 (513)
|++++.|...+|.+.+.+++..+|+.-|||+||||+++||+|.+.|.-.+|..|...++.+..+++|-+
T Consensus 158 PIIeNt~~E~~L~D~l~~aie~YP~tcAVLVR~HGvyvWG~TWekaKt~~EcydYLfelaikm~klgip 226 (238)
T KOG2631|consen 158 PIIENTPSESDLKDSLKKAIELYPDTCAVLVRRHGVYVWGPTWEKAKTMTECYDYLFELAIKMKKLGIP 226 (238)
T ss_pred eeecCCchHHHHHHHHHHHHHhCCcceEEEEecCcEEEecCcHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999987
No 33
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.98 E-value=1.6e-31 Score=254.88 Aligned_cols=199 Identities=44% Similarity=0.723 Sum_probs=173.4
Q ss_pred CeEEEEcccccccccccccccchhhHhhhHHHHHhhhcCChhhHHHHHHHHHHhHHhhhcccCCcccCCCCCCChHHHHH
Q 010305 284 PRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIA 363 (513)
Q Consensus 284 ikavlFDlDGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (513)
|++|+||++||+++.++|++.+|||+++++..++..+|..+ .+..++... ... .. +
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~----~~~~~~~~~--------------~~~--~~----~ 56 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYEST----IVENLRELG--------------KTP--EE----L 56 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCH----HHHHHHHhc--------------cCC--cH----H
Confidence 58999999999999999999999999999999999888655 334333321 110 11 4
Q ss_pred HHHHHHHHHHhhhcchhhHHHhhHHHHHHHhhcCcccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCC
Q 010305 364 ALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGD 443 (513)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~g 443 (513)
.+..++..|+..+++.+.+++++|.+|++.|.....+..+|||+.++|++|+++|++++|+||++...++.++++...++
T Consensus 57 ~~~~~~~~~~~~d~k~~~lk~lqg~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~ 136 (220)
T TIGR01691 57 ILLRKLHAEMDKDRKATPLKTLQGLIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGN 136 (220)
T ss_pred HHHHHHHHHHHcCCCcchHHHHHHHHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccc
Confidence 56666677999999999999999999999999888888999999999999999999999999999999998888764447
Q ss_pred cccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCC
Q 010305 444 LRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDGW 507 (513)
Q Consensus 444 l~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~ 507 (513)
+.++|+.+++...+.||+|++|..+++++|++ |++|+||||+..|+++|+++||.++++.++.
T Consensus 137 L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 137 LTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred hhhhcceEEEeCcccCCCHHHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence 88899998866667899999999999999997 9999999999999999999999999999865
No 34
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.94 E-value=2.3e-26 Score=225.23 Aligned_cols=105 Identities=13% Similarity=0.122 Sum_probs=99.6
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...+|||+.++|+.|+++|++++|+||++...++..++++ ++.+||+.++ ++....||+|++|+.++++++++ |
T Consensus 106 ~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~---gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~-~ 181 (248)
T PLN02770 106 QLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLL---GLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVS-K 181 (248)
T ss_pred cCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc---CChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCC-h
Confidence 4579999999999999999999999999999999999999 9999999988 55677899999999999999998 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 478 SEILFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
++|+||||+..|+++|+++|+.+|+|.||+.
T Consensus 182 ~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~ 212 (248)
T PLN02770 182 DHTFVFEDSVSGIKAGVAAGMPVVGLTTRNP 212 (248)
T ss_pred hHEEEEcCCHHHHHHHHHCCCEEEEEeCCCC
Confidence 9999999999999999999999999999974
No 35
>PRK08324 short chain dehydrogenase; Validated
Probab=99.94 E-value=2.6e-27 Score=263.25 Aligned_cols=199 Identities=18% Similarity=0.128 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCC-CCCccEEEEeccCCCCCCCCCCCEEEEeCCC------------
Q 010305 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI-PKPQQLILMSPSGVQKERMEPEDMYVLSGNG------------ 94 (513)
Q Consensus 28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~-~~~~~~~litpsG~~~~~l~~~div~vd~~g------------ 94 (513)
+++++.+....+...+.||+.+++||+|+|+.+..+ .++.+.|||||||.++++|+++||+.||+++
T Consensus 14 ~~~~~~v~~~~~l~~~~~l~~~~gGN~S~k~~~~~~~g~~~~~~~it~SG~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~ 93 (681)
T PRK08324 14 DELALLVYRSRLLGADPRLVNHGGGNTSVKTTETDLTGEPVEVLWVKGSGGDLATITAAGFAALRLDPLRALKELGVLSD 93 (681)
T ss_pred cHHHHHHHHHHHhCCCHHHhccCCceeeeeeeccccCCCeeeEEEEECCccChhhccccCCCeeeHHHHHhhhccCCcch
Confidence 456666666666666677999999999999854211 1223479999999999999999999999874
Q ss_pred ----------CeecCCCCCCCCCCCCCCCCchHHHHHHHHhcCccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhc
Q 010305 95 ----------TTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIK 164 (513)
Q Consensus 95 ----------~~~~g~~~~p~~~~p~~~S~E~~lH~~iy~~~d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~ 164 (513)
....| +.+||+|+.||+.||+ ++|+||||++++++|++... .+... + .++
T Consensus 94 ~~~~~~~~~~~~~~~---------~~~pS~e~~lH~~i~~----~~V~HtH~~~~~a~s~~~~~---~~~~~-~---~~~ 153 (681)
T PRK08324 94 DEMVAYLRHCLFDPN---------APAPSIETLLHAFLPF----KHVDHTHPDAIIAIANAPDG---EELTR-E---IFG 153 (681)
T ss_pred HHHHHHHHhhccCCC---------CCCCchhHHHHhhcCC----CEEEecCchHHHHHHcCCCH---HHHHH-H---HcC
Confidence 22222 1245999999999986 56999999999999998532 22111 1 122
Q ss_pred CCcccccceeeeecCCCCchHHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhC--CC
Q 010305 165 GHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL--GL 242 (513)
Q Consensus 165 g~~~~~~~~vpv~~~~~~~~~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~--g~ 242 (513)
+ .|+++||.....+|++.+.+.++..++.+++||+|||+++||+|+.+||.+++.+|++|++++.+++. |+
T Consensus 154 ~-------~v~~~py~~pg~~l~~~~~~~~~~~~~~~~~lL~nHG~~~~G~~~~eA~~~~~~~e~~a~~~~~a~~~~~g~ 226 (681)
T PRK08324 154 D-------RVGWVPYVRPGFDLALAIAEAVRANPGAEGVVLGKHGLFTWGDTAKEAYERTIEIITRAEEYIEARGAGFGG 226 (681)
T ss_pred C-------ceEEcCccCCChHHHHHHHHHHHhCCCCcEEEECCCCCeeccCCHHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 2 39999996434789999999998876788999999999999999999999999999999999999987 55
Q ss_pred CC-CCCCCCccc
Q 010305 243 DW-STPNHGPTR 253 (513)
Q Consensus 243 ~~-~~~~~~~~~ 253 (513)
+. ...++++.+
T Consensus 227 ~~~~~l~~~~~~ 238 (681)
T PRK08324 227 AVYEALPAPERR 238 (681)
T ss_pred ccccCCCchhHH
Confidence 43 233444444
No 36
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.94 E-value=3.1e-26 Score=220.20 Aligned_cols=105 Identities=27% Similarity=0.353 Sum_probs=100.6
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...+|||+.++|..|+++|++++|+||++...++.+++++ |+.++|+.++ ++....||+|..+..++++++++ |
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~---gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~-~ 162 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKAL---GLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLD-P 162 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHh---CCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCC-h
Confidence 4579999999999999999999999999999999999999 9999999999 55788999999999999999998 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 478 SEILFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
++++||||+.+|+++|++||+.+++|.|||.
T Consensus 163 ~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~ 193 (220)
T COG0546 163 EEALMVGDSLNDILAAKAAGVPAVGVTWGYN 193 (220)
T ss_pred hheEEECCCHHHHHHHHHcCCCEEEEECCCC
Confidence 9999999999999999999999999999995
No 37
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=6.7e-26 Score=219.31 Aligned_cols=106 Identities=23% Similarity=0.312 Sum_probs=99.0
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...+|||+.++|+.|+++|++++|+||++......+++++ ++..+|+.++ ++....||+|++|.++++++|++ |
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~-p 168 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQL---GWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVA-P 168 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCC-h
Confidence 3579999999999999999999999999999999999999 9999999888 34567899999999999999998 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcEEEEecCCCC
Q 010305 478 SEILFVTDVYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
++|+||||+.+|+++|+++|+.+|+|.||+..
T Consensus 169 ~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~ 200 (229)
T PRK13226 169 TDCVYVGDDERDILAARAAGMPSVAALWGYRL 200 (229)
T ss_pred hhEEEeCCCHHHHHHHHHCCCcEEEEeecCCC
Confidence 99999999999999999999999999999963
No 38
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=99.94 E-value=4.3e-26 Score=201.30 Aligned_cols=203 Identities=42% Similarity=0.702 Sum_probs=183.7
Q ss_pred CCeEEEEcccccccccccccccchhhHhhhHHHHHhhhcCChhhHHHHHHHHHHhHHhhhcccCCcccCCCCCCChHHHH
Q 010305 283 FPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVI 362 (513)
Q Consensus 283 ~ikavlFDlDGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (513)
|.|+|+.|++||..+.+++.+.+|||+.++++.++.+++...++...+.....+... ....
T Consensus 3 m~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~v~~~v~~v~~e~g~---------------~~s~---- 63 (229)
T COG4229 3 MVKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSEVKKIVDEVLSEFGI---------------ANSE---- 63 (229)
T ss_pred chhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCChhhHHHHHHHHHhCc---------------cchH----
Confidence 468999999999999999999999999999999999998878777777776665321 1123
Q ss_pred HHHHHHHHHHHhhhcchhhHHHhhHHHHHHHhhcCcccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCC
Q 010305 363 AALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG 442 (513)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~ 442 (513)
+++...+..|+.++++...++.+||.+|..+|+.+..+.++||++.+.|++.+++|++++|.|+++...++.++.+.+.+
T Consensus 64 E~lva~~~~wiaed~K~t~lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~ag 143 (229)
T COG4229 64 EALVALLLEWIAEDSKDTPLKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAG 143 (229)
T ss_pred HHHHHHHHHHHhcccccchHHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccc
Confidence 44455555689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEec
Q 010305 443 DLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILD 505 (513)
Q Consensus 443 gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 505 (513)
+|..+|+++||...+.|-+...|.+++...|++ |.+++|+.|.+..+.+|+.+||.++++..
T Consensus 144 dL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~-p~eilFLSDn~~EL~AA~~vGl~t~l~~R 205 (229)
T COG4229 144 DLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLP-PAEILFLSDNPEELKAAAGVGLATGLAVR 205 (229)
T ss_pred cHHhhhcceeeccccccccchhHHHHHHhcCCC-chheEEecCCHHHHHHHHhcchheeeeec
Confidence 999999999999889999999999999999997 99999999999999999999999988763
No 39
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.94 E-value=2e-26 Score=255.13 Aligned_cols=185 Identities=17% Similarity=0.094 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHHcCCccccCCceeEEeCCC-CC-CCCccEEEEeccCCCCCCCCCCCEEEEeCCC--------------
Q 010305 31 RVLISELCRHFYTLGWVSGTGGSITIKVHDD-SI-PKPQQLILMSPSGVQKERMEPEDMYVLSGNG-------------- 94 (513)
Q Consensus 31 r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~-~~-~~~~~~~litpsG~~~~~l~~~div~vd~~g-------------- 94 (513)
++.+...+++.++.||+.+++||+|+|+.++ |+ ..+.+.|||||||.++++|+++||+.||+++
T Consensus 2 ~~~v~~s~~~g~~~~l~~~~gGN~Svk~~~~~~~~g~~~~~~~I~~SG~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~ 81 (676)
T TIGR02632 2 AELVYRSNLLGADRRITNYGGGNTSAKTTETDPLTGGEVEVMWVKGSGGDLGTMTAANFAGLRLDKLRPLKERYPGVETE 81 (676)
T ss_pred HHHHHHHHHhCCCHHHhccCCccceeeccccCCCcCceeeEEEEECCccCHhhccccCCceEechHHHHHhhhccccCCH
Confidence 5678888899999999999999999998652 11 1111379999999999999999999999985
Q ss_pred ----------CeecCCCCCCCCCCCCCCCCchHHHHHHHHhcCccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhc
Q 010305 95 ----------TTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIK 164 (513)
Q Consensus 95 ----------~~~~g~~~~p~~~~p~~~S~E~~lH~~iy~~~d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~ 164 (513)
.+.++. ++||+|++||+.||. ++|.||||++++++++.... .+ +++.+.
T Consensus 82 ~~~v~~~~~~~~~~~~---------~~PS~Et~lH~~i~~----~~v~HtH~~~~~a~a~~~~~---~~-----~~~~~~ 140 (676)
T TIGR02632 82 DEMVAYLPHCLFNLNG---------RAPSIDTPLHAFVPF----KHVDHMHPDAIIALACAENG---RE-----LTEEIF 140 (676)
T ss_pred HHHHHHHHhcccCCCC---------CCCCccHHHHhhccc----ceEEecCchHHHHHhcCccH---HH-----HHHHHc
Confidence 233332 244999999999964 67889999999999988531 11 222221
Q ss_pred CCcccccceeeeecCCCCchHHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 010305 165 GHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 242 (513)
Q Consensus 165 g~~~~~~~~vpv~~~~~~~~~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~ 242 (513)
|. .|+++||.....+|++.+.+.++.+|+.++|||+|||+++||+|+++||.+++.+|+.|++++.++.+|.
T Consensus 141 g~------~v~~vpy~~pG~~La~~~~~~~~~~~~~~~vll~~HGl~~~G~~~~eA~~~~~~~e~~a~~~~~~~~~g~ 212 (676)
T TIGR02632 141 GD------EVVWVPWRRPGFQLGLDIAAQVDANPQAKGVVLEGHGLVVWGDTAKECYERTLSIINEAEQFIEEKRGGE 212 (676)
T ss_pred CC------eEEEeccccCChHHHHHHHHHHHhCCCCcEEEEcCCCeEEecCCHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 21 3899999643468999999999887667899999999999999999999999999999999999999876
No 40
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.94 E-value=9.4e-26 Score=216.00 Aligned_cols=107 Identities=20% Similarity=0.190 Sum_probs=100.5
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...+|||+.++|+.|+++|++++|+||++...+..+++.+ ++.++|+.++ ++....||+|++|.+++++++++ |
T Consensus 80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~-~ 155 (214)
T PRK13288 80 LVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLT---GLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAK-P 155 (214)
T ss_pred hcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCC-H
Confidence 3579999999999999999999999999999999999999 9999999998 55677899999999999999998 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcEEEEecCCCCc
Q 010305 478 SEILFVTDVYQEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
++|+||||+..|+++|+++|+.+|+|.||+...
T Consensus 156 ~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~ 188 (214)
T PRK13288 156 EEALMVGDNHHDILAGKNAGTKTAGVAWTIKGR 188 (214)
T ss_pred HHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCH
Confidence 999999999999999999999999999998643
No 41
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.93 E-value=4.4e-25 Score=216.87 Aligned_cols=105 Identities=15% Similarity=0.088 Sum_probs=98.3
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccccc-ceee--ecccCCCCCHHHHHHHHHHcCC-C
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGNKRETPSYVEITNSLGV-D 475 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~f-d~i~--~~~~~~KP~p~~~~~~l~~l~~-~ 475 (513)
...++||+.++|+.|+++|++++|+||++...++.+++++ ++..+| +.++ ++....||+|++|..+++++++ +
T Consensus 97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~---gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~ 173 (253)
T TIGR01422 97 YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEA---ALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYD 173 (253)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHH---HhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCC
Confidence 4589999999999999999999999999999999999999 999986 8877 4567889999999999999998 5
Q ss_pred CCCcEEEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 476 KPSEILFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 476 ~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
|++|+||||+++|+++|+++||.+|+|.||+.
T Consensus 174 -~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~ 205 (253)
T TIGR01422 174 -VAACVKVGDTVPDIEEGRNAGMWTVGLILSSN 205 (253)
T ss_pred -chheEEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence 89999999999999999999999999999986
No 42
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.93 E-value=6e-25 Score=209.96 Aligned_cols=107 Identities=22% Similarity=0.307 Sum_probs=100.2
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...++||+.++|+.|+++|++++|+||++...++.+++++ ++..+|+.++ ++....||+|++|..++++++++ |
T Consensus 83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~-~ 158 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL---GLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVA-P 158 (213)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCC-h
Confidence 3579999999999999999999999999999999999999 9999999988 45667899999999999999998 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcEEEEecCCCCc
Q 010305 478 SEILFVTDVYQEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
++|+||||+.+|+++|+++|+.+|+|.||+...
T Consensus 159 ~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~ 191 (213)
T TIGR01449 159 QQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYG 191 (213)
T ss_pred hHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCC
Confidence 999999999999999999999999999998743
No 43
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.93 E-value=1e-24 Score=209.64 Aligned_cols=106 Identities=20% Similarity=0.264 Sum_probs=99.2
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...++||+.++|+.|+++|++++|+||++...+...++++ ++..+|+.++ ++.+..||+|++|+.+++++|++ |
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~ 167 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERL---GVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVK-P 167 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhC---ChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCC-h
Confidence 3579999999999999999999999999999999999999 9999999988 55777899999999999999997 9
Q ss_pred CcEEEEecCh-hhHHHHHHcCCcEEEEecCCCC
Q 010305 478 SEILFVTDVY-QEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 478 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
++|+||||+. +|+++|+++|+.+|+|.+|+..
T Consensus 168 ~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~ 200 (221)
T TIGR02253 168 EEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSS 200 (221)
T ss_pred hhEEEECCChHHHHHHHHHCCCEEEEECCCCCc
Confidence 9999999998 8999999999999999998864
No 44
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.93 E-value=2.4e-24 Score=213.40 Aligned_cols=106 Identities=13% Similarity=0.036 Sum_probs=97.1
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccccc-ceee--ecccCCCCCHHHHHHHHHHcCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGNKRETPSYVEITNSLGVDK 476 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~f-d~i~--~~~~~~KP~p~~~~~~l~~l~~~~ 476 (513)
...++||+.++|+.|+++|++++|+||++...+..+++.+ ++.++| +.++ ++....||+|++|+.+++++|+.+
T Consensus 99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~---~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~ 175 (267)
T PRK13478 99 YATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLA---AAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYD 175 (267)
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHH---hhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCC
Confidence 4589999999999999999999999999999999999988 888875 7777 556778999999999999999952
Q ss_pred CCcEEEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 477 PSEILFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 477 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
|++|+||||+++|+++|+++|+.+|+|.||++
T Consensus 176 ~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 176 VAACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred CcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 69999999999999999999999999999997
No 45
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.93 E-value=1.3e-24 Score=213.56 Aligned_cols=105 Identities=10% Similarity=0.100 Sum_probs=97.8
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...+|||+.++|+.|+++|++++|+||++...++.+++++ ++.+||+.++ ++....||+|++|+.+++++|++ |
T Consensus 107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~---gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~-p 182 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAV---GMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFI-P 182 (260)
T ss_pred CcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHc---CCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCC-h
Confidence 3578999999999999999999999999999999999999 9999999998 55677899999999999999998 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcEEEEecCCCC
Q 010305 478 SEILFVTDVYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
++|+||||+..|+++|+++||.+|+|. |+..
T Consensus 183 ~~~l~IgDs~~Di~aA~~aG~~~i~v~-g~~~ 213 (260)
T PLN03243 183 ERCIVFGNSNSSVEAAHDGCMKCVAVA-GKHP 213 (260)
T ss_pred HHeEEEcCCHHHHHHHHHcCCEEEEEe-cCCc
Confidence 999999999999999999999999986 6653
No 46
>PRK11587 putative phosphatase; Provisional
Probab=99.92 E-value=1.8e-24 Score=207.76 Aligned_cols=104 Identities=20% Similarity=0.166 Sum_probs=94.0
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...+|||+.++|+.|+++|++++|+||++.......++.. ++ .+|+.++ ++....||+|++|..+++++|+. |
T Consensus 81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~---~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~-p 155 (218)
T PRK11587 81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA---GL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLA-P 155 (218)
T ss_pred CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhc---CC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCC-c
Confidence 4579999999999999999999999999988878888878 77 4577766 45667899999999999999998 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 478 SEILFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
++|+||||+..|+++|+++||.+|+|.||+.
T Consensus 156 ~~~l~igDs~~di~aA~~aG~~~i~v~~~~~ 186 (218)
T PRK11587 156 QECVVVEDAPAGVLSGLAAGCHVIAVNAPAD 186 (218)
T ss_pred ccEEEEecchhhhHHHHHCCCEEEEECCCCc
Confidence 9999999999999999999999999999864
No 47
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.92 E-value=2e-24 Score=207.57 Aligned_cols=108 Identities=14% Similarity=0.134 Sum_probs=99.3
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcc--cccceee--ecccCCCCCHHHHHHHHHHcCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR--KYLSGFF--DTAVGNKRETPSYVEITNSLGVD 475 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~--~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~ 475 (513)
...++||+.++|+.|+++|++++|+||++...+..+++++ ++. .+|+.++ ++....||+|++|+.+++++++.
T Consensus 85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~---~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~ 161 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKL---GWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQ 161 (220)
T ss_pred CCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHh---hhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCC
Confidence 3589999999999999999999999999999999999999 998 9999988 45667899999999999999995
Q ss_pred CCCcEEEEecChhhHHHHHHcCCcE-EEEecCCCCc
Q 010305 476 KPSEILFVTDVYQEATAAKAAGKEL-FVILDGWMQV 510 (513)
Q Consensus 476 ~p~~~l~VGDs~~Di~aA~~aG~~~-i~v~~G~~~~ 510 (513)
+|++|+||||+..|+++|+++||.+ +++.||+.+.
T Consensus 162 ~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~ 197 (220)
T TIGR03351 162 DVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDA 197 (220)
T ss_pred ChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcH
Confidence 2699999999999999999999999 9999998653
No 48
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.92 E-value=5.5e-24 Score=204.92 Aligned_cols=106 Identities=25% Similarity=0.280 Sum_probs=99.3
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...+|||+.++|+.|+++|++++|+||+....++.+++.+ ++..+|+.++ ++....||+|++|+.+++++|++ |
T Consensus 90 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~ 165 (222)
T PRK10826 90 TRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMF---DLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVD-P 165 (222)
T ss_pred CCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhC---cchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCC-H
Confidence 4579999999999999999999999999999999999999 9999999988 45667899999999999999998 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcEEEEecCCCC
Q 010305 478 SEILFVTDVYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
++|+||||+.+|+++|+++|+++|++.++...
T Consensus 166 ~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~ 197 (222)
T PRK10826 166 LTCVALEDSFNGMIAAKAARMRSIVVPAPEQQ 197 (222)
T ss_pred HHeEEEcCChhhHHHHHHcCCEEEEecCCccC
Confidence 99999999999999999999999999988643
No 49
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.92 E-value=2.4e-24 Score=204.83 Aligned_cols=107 Identities=25% Similarity=0.254 Sum_probs=100.6
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...+|||+.++|++|+++|++++|+||++...+...++++ ++..+|+.++ ++....||+|++|+.++++++++ |
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~ 148 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEAL---GLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVP-P 148 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHc---CChhheeeEEecCcCCCCCCChHHHHHHHHHcCCC-h
Confidence 4689999999999999999999999999999999999999 9999999988 45667899999999999999998 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcEEEEecCCCCc
Q 010305 478 SEILFVTDVYQEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
++|+||||+..|+++|+++||+++++.||+.+.
T Consensus 149 ~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~ 181 (205)
T TIGR01454 149 EDAVMVGDAVTDLASARAAGTATVAALWGEGDA 181 (205)
T ss_pred hheEEEcCCHHHHHHHHHcCCeEEEEEecCCCh
Confidence 999999999999999999999999999999754
No 50
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.92 E-value=6.9e-24 Score=210.28 Aligned_cols=117 Identities=20% Similarity=0.290 Sum_probs=104.1
Q ss_pred HHHHhhcCcccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHH
Q 010305 390 WRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVE 467 (513)
Q Consensus 390 ~~~~~~~~~~~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~ 467 (513)
|.+.|........+|||+.++|+.|+++|++++|+||++...++.+++++ ++..+|+.++ ++....||+|++|+.
T Consensus 89 ~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~---~i~~~f~~i~~~d~~~~~Kp~p~~~~~ 165 (272)
T PRK13223 89 FMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQM---KIGRYFRWIIGGDTLPQKKPDPAALLF 165 (272)
T ss_pred HHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHc---CcHhhCeEEEecCCCCCCCCCcHHHHH
Confidence 44445443334579999999999999999999999999999999999999 9999999888 445678999999999
Q ss_pred HHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCCCCc
Q 010305 468 ITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 468 ~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
+++++|++ |++|+||||+.+|+++|+++||++++|.||+...
T Consensus 166 ~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~ 207 (272)
T PRK13223 166 VMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHG 207 (272)
T ss_pred HHHHhCCC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCc
Confidence 99999998 9999999999999999999999999999998754
No 51
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.92 E-value=3.4e-24 Score=218.06 Aligned_cols=105 Identities=12% Similarity=0.117 Sum_probs=99.0
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...+|||+.++|+.|+++|++++|+||++...++.+++++ ++.+||+.++ ++....||+|++|+.+++++|+. |
T Consensus 214 ~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~l---gL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~-P 289 (381)
T PLN02575 214 IYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSI---GIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFI-P 289 (381)
T ss_pred CCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCC-c
Confidence 3579999999999999999999999999999999999999 9999999998 55667899999999999999998 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 478 SEILFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
++|+||||+..|+++|+++||++|+|.|++.
T Consensus 290 eecl~IGDS~~DIeAAk~AGm~~IgV~~~~~ 320 (381)
T PLN02575 290 ERCIVFGNSNQTVEAAHDARMKCVAVASKHP 320 (381)
T ss_pred ccEEEEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence 9999999999999999999999999998753
No 52
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.92 E-value=4.2e-24 Score=205.31 Aligned_cols=108 Identities=27% Similarity=0.294 Sum_probs=100.2
Q ss_pred CcccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCC
Q 010305 397 NELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGV 474 (513)
Q Consensus 397 ~~~~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~ 474 (513)
......++||+.++|+.|+++|++++++||+++......++.. ++.++|+.++ ++....||+|++|+.+++++|+
T Consensus 81 ~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~---gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv 157 (221)
T COG0637 81 ELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARL---GLLDYFDVIVTADDVARGKPAPDIYLLAAERLGV 157 (221)
T ss_pred hhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHc---cChhhcchhccHHHHhcCCCCCHHHHHHHHHcCC
Confidence 3345689999999999999999999999999999999999999 9999999988 5677779999999999999999
Q ss_pred CCCCcEEEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 475 DKPSEILFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 475 ~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
+ |++|+.|+||+.++++|++|||.+|+|..++.
T Consensus 158 ~-P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 158 D-PEECVVVEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred C-hHHeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence 8 99999999999999999999999999997554
No 53
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.92 E-value=9.2e-24 Score=199.66 Aligned_cols=103 Identities=23% Similarity=0.272 Sum_probs=96.9
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...++||+.++|+.|+++|++++|+||++...++..++++ |+..+||.++ ++.+..||+|++|..+++++|++ |
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~---gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~-p 165 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHA---GLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVP-P 165 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHC---CChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCC-h
Confidence 3479999999999999999999999999999999999999 9999999988 55778899999999999999998 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcEEEEecC
Q 010305 478 SEILFVTDVYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~G 506 (513)
++|+||||+..|+++|+++||++|+|..+
T Consensus 166 ~~~~~vgD~~~Di~~A~~~G~~~i~v~r~ 194 (198)
T TIGR01428 166 DEVLFVASNPWDLGGAKKFGFKTAWVNRP 194 (198)
T ss_pred hhEEEEeCCHHHHHHHHHCCCcEEEecCC
Confidence 99999999999999999999999999864
No 54
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.91 E-value=1.6e-23 Score=201.87 Aligned_cols=106 Identities=14% Similarity=0.136 Sum_probs=98.2
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...++||+.++|+.|+++|++++|+||++...+...++++ ++.++|+.++ ++....||+|++|+.+++++|++ |
T Consensus 91 ~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~---~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~-p 166 (224)
T PRK14988 91 RAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHT---GLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLK-A 166 (224)
T ss_pred cCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHC---CcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCC-h
Confidence 4579999999999999999999999999999999999999 9999999988 55677899999999999999997 9
Q ss_pred CcEEEEecChhhHHHHHHcCCc-EEEEecCCCC
Q 010305 478 SEILFVTDVYQEATAAKAAGKE-LFVILDGWMQ 509 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~-~i~v~~G~~~ 509 (513)
++|+||||+..|+++|+++||. +++|.++.+.
T Consensus 167 ~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~ 199 (224)
T PRK14988 167 ERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSG 199 (224)
T ss_pred HHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCC
Confidence 9999999999999999999998 4778887754
No 55
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.91 E-value=1.9e-23 Score=201.36 Aligned_cols=107 Identities=21% Similarity=0.312 Sum_probs=99.7
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...++||+.++|+.|+++|++++|+||+.....+.+++++ ++..+|+.++ ++....||+|++|..++++++++ |
T Consensus 91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~ 166 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEAL---GIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLD-P 166 (226)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCC-h
Confidence 4579999999999999999999999999999999999999 9999999988 44567899999999999999998 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcEEEEecCCCCc
Q 010305 478 SEILFVTDVYQEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
++|+||||+.+|+++|+++|+.+|+|.||+.+.
T Consensus 167 ~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~ 199 (226)
T PRK13222 167 EEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYG 199 (226)
T ss_pred hheEEECCCHHHHHHHHHCCCcEEEECcCCCCc
Confidence 999999999999999999999999999998743
No 56
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.91 E-value=2.5e-23 Score=205.77 Aligned_cols=113 Identities=18% Similarity=0.186 Sum_probs=98.5
Q ss_pred HhhcCcccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHc
Q 010305 393 GFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSL 472 (513)
Q Consensus 393 ~~~~~~~~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l 472 (513)
.|........+|||+.++|+.|+++|++++|+||++...+..+++++ ++.++|+.++.... .+++|+.|+.+++++
T Consensus 133 ~~~~~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~---gl~~~F~~vi~~~~-~~~k~~~~~~~l~~~ 208 (273)
T PRK13225 133 QLGDCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQ---GLRSLFSVVQAGTP-ILSKRRALSQLVARE 208 (273)
T ss_pred HHHhhcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CChhheEEEEecCC-CCCCHHHHHHHHHHh
Confidence 33333334589999999999999999999999999999999999999 99999998873211 235678999999999
Q ss_pred CCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCCCCc
Q 010305 473 GVDKPSEILFVTDVYQEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 473 ~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
+++ |++|+||||+..|+++|+++||.+|+|.||+...
T Consensus 209 ~~~-p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~ 245 (273)
T PRK13225 209 GWQ-PAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDR 245 (273)
T ss_pred CcC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCH
Confidence 998 9999999999999999999999999999998764
No 57
>PLN02940 riboflavin kinase
Probab=99.90 E-value=3.5e-23 Score=214.30 Aligned_cols=106 Identities=20% Similarity=0.238 Sum_probs=98.7
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHh-ccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFG-NSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 476 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~-~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~ 476 (513)
...++||+.++|+.|+++|++++|+||++...+...++ +. ++.++|+.++ ++....||+|++|+.++++++++
T Consensus 91 ~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~---gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~- 166 (382)
T PLN02940 91 NIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQ---GWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVE- 166 (382)
T ss_pred cCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcc---ChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCC-
Confidence 45799999999999999999999999999999888887 78 8999999998 55678899999999999999998
Q ss_pred CCcEEEEecChhhHHHHHHcCCcEEEEecCCCC
Q 010305 477 PSEILFVTDVYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 477 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
|++|+||||+..|+++|+++||.+|+|.||+..
T Consensus 167 p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~ 199 (382)
T PLN02940 167 PSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQ 199 (382)
T ss_pred hhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcc
Confidence 999999999999999999999999999998753
No 58
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.90 E-value=2.2e-23 Score=194.56 Aligned_cols=98 Identities=19% Similarity=0.269 Sum_probs=89.8
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCCC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 478 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p~ 478 (513)
..++||+.++|+.|+++|++++|+||+.. ....++++ ++..+|+.++ ++....||+|++|+.++++++++ |+
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~-~~ 159 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKL---GLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVS-PS 159 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhc---CcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCC-HH
Confidence 47999999999999999999999999754 35688999 9999999988 55678899999999999999998 99
Q ss_pred cEEEEecChhhHHHHHHcCCcEEEEe
Q 010305 479 EILFVTDVYQEATAAKAAGKELFVIL 504 (513)
Q Consensus 479 ~~l~VGDs~~Di~aA~~aG~~~i~v~ 504 (513)
+|+||||+..|+++|+++||++|+|.
T Consensus 160 ~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 160 ECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred HeEEEecCHHHHHHHHHcCCEEEecC
Confidence 99999999999999999999999874
No 59
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.90 E-value=2.2e-22 Score=190.98 Aligned_cols=97 Identities=20% Similarity=0.244 Sum_probs=89.4
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCCC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 478 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p~ 478 (513)
..++||+.++|+.|+++|++++|+||++... ...++++ ++..+|+.++ ++.+..||+|++|..+++++|++ |+
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~~---~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~-~~ 178 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEAL---GLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGIS-PE 178 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHHC---CcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCC-hh
Confidence 4799999999999999999999999998764 7788888 9999999998 45677899999999999999998 99
Q ss_pred cEEEEecCh-hhHHHHHHcCCcEEE
Q 010305 479 EILFVTDVY-QEATAAKAAGKELFV 502 (513)
Q Consensus 479 ~~l~VGDs~-~Di~aA~~aG~~~i~ 502 (513)
+|+||||+. .|+++|+++||++|+
T Consensus 179 ~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 179 EALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred HEEEECCCchHHHHHHHHcCCeeeC
Confidence 999999998 899999999999885
No 60
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.90 E-value=6.1e-23 Score=191.59 Aligned_cols=98 Identities=23% Similarity=0.329 Sum_probs=90.7
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...++||+.++|+.|+++|++++|+||+ ..++.+++++ ++..+|+.++ ++....||+|++|..++++++++ |
T Consensus 86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~---~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~-~ 159 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKL---GLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVS-P 159 (185)
T ss_pred CCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHc---ChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCC-H
Confidence 3689999999999999999999999998 5678899999 9999999988 45667899999999999999998 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcEEEE
Q 010305 478 SEILFVTDVYQEATAAKAAGKELFVI 503 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~i~v 503 (513)
++|+||||+..|+++|+++|+++|+|
T Consensus 160 ~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 160 NECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred HHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999999875
No 61
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.89 E-value=1.1e-22 Score=195.73 Aligned_cols=102 Identities=19% Similarity=0.226 Sum_probs=92.3
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccc-eee--ecccCCCCCHHHHHHHHHHcCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-GFF--DTAVGNKRETPSYVEITNSLGVDK 476 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd-~i~--~~~~~~KP~p~~~~~~l~~l~~~~ 476 (513)
...++||+.++|+.|+ ++++|+||++...+...++++ ++.++|+ .++ ++....||+|++|+.++++++++
T Consensus 86 ~~~~~~gv~~~L~~L~---~~~~ivTn~~~~~~~~~l~~~---~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~- 158 (221)
T PRK10563 86 ELEPIAGANALLESIT---VPMCVVSNGPVSKMQHSLGKT---GMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVN- 158 (221)
T ss_pred cCCcCCCHHHHHHHcC---CCEEEEeCCcHHHHHHHHHhc---ChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCC-
Confidence 4579999999999994 899999999999999999999 9999996 455 35678899999999999999997
Q ss_pred CCcEEEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 477 PSEILFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 477 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
|++|+||||+..|+++|+++|+++|++.++..
T Consensus 159 p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~ 190 (221)
T PRK10563 159 VENCILVDDSSAGAQSGIAAGMEVFYFCADPH 190 (221)
T ss_pred HHHeEEEeCcHhhHHHHHHCCCEEEEECCCCC
Confidence 99999999999999999999999999976543
No 62
>PRK09449 dUMP phosphatase; Provisional
Probab=99.89 E-value=2.9e-22 Score=193.13 Aligned_cols=101 Identities=17% Similarity=0.170 Sum_probs=93.0
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCCC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 478 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p~ 478 (513)
..++||+.++|+.|+ +|++++|+||++...+...++++ ++..+||.++ ++....||+|++|..+++++|+.+++
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~---~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 169 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERT---GLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRS 169 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhC---ChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcc
Confidence 579999999999999 57999999999999999999999 9999999998 45677899999999999999985258
Q ss_pred cEEEEecCh-hhHHHHHHcCCcEEEEec
Q 010305 479 EILFVTDVY-QEATAAKAAGKELFVILD 505 (513)
Q Consensus 479 ~~l~VGDs~-~Di~aA~~aG~~~i~v~~ 505 (513)
+|+||||+. .|+++|+++||+++++.+
T Consensus 170 ~~~~vgD~~~~Di~~A~~aG~~~i~~~~ 197 (224)
T PRK09449 170 RVLMVGDNLHSDILGGINAGIDTCWLNA 197 (224)
T ss_pred cEEEEcCCcHHHHHHHHHCCCcEEEECC
Confidence 999999998 699999999999999985
No 63
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.89 E-value=5.9e-22 Score=190.61 Aligned_cols=105 Identities=16% Similarity=0.230 Sum_probs=97.8
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHc-CCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSL-GVDK 476 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l-~~~~ 476 (513)
...++||+.++|+.|+++ ++++|+||++...+...++.+ ++..+||.++ ++....||+|++|..+++++ +++
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~---~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~- 169 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKS---GLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFS- 169 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHC---CcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCC-
Confidence 357999999999999999 999999999999999999999 9999999998 45677899999999999999 998
Q ss_pred CCcEEEEecCh-hhHHHHHHcCCcEEEEecCCCC
Q 010305 477 PSEILFVTDVY-QEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 477 p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
|++|+||||+. .|+++|+++||.+|++.||...
T Consensus 170 ~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~ 203 (224)
T TIGR02254 170 KEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHP 203 (224)
T ss_pred chheEEECCCcHHHHHHHHHCCCcEEEECCCCCC
Confidence 99999999998 7999999999999999998654
No 64
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.89 E-value=2.6e-22 Score=188.03 Aligned_cols=98 Identities=18% Similarity=0.320 Sum_probs=90.9
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCCC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 478 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p~ 478 (513)
..++|+ .++|+.|++. ++++|+||++...++..++++ ++.+||+.++ ++....||+|++|..++++++++ |+
T Consensus 87 ~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~---~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~-~~ 160 (188)
T PRK10725 87 VEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHL---GLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQ-PT 160 (188)
T ss_pred CCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhC---CcHhHceEEEehhhccCCCCChHHHHHHHHHcCCC-HH
Confidence 468886 6999999876 899999999999999999999 9999999988 55678899999999999999997 99
Q ss_pred cEEEEecChhhHHHHHHcCCcEEEEe
Q 010305 479 EILFVTDVYQEATAAKAAGKELFVIL 504 (513)
Q Consensus 479 ~~l~VGDs~~Di~aA~~aG~~~i~v~ 504 (513)
+|+||||+..|+++|+++|+++|+|.
T Consensus 161 ~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 161 QCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred HeEEEeccHhhHHHHHHCCCEEEeec
Confidence 99999999999999999999999985
No 65
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.89 E-value=2.3e-22 Score=200.68 Aligned_cols=109 Identities=25% Similarity=0.213 Sum_probs=93.2
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee-ecccCCCCCHHHHHHHHHHcCCCCCCc
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSE 479 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~l~~l~~~~p~~ 479 (513)
..++||+.++|+.|+++|++++|+||++...+..+++.+...++..+|+.+. ++....||+|++|..+++++|++ |++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~-p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVD-PSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcC-hHH
Confidence 4799999999999999999999999999999988888761112233344443 45667899999999999999998 999
Q ss_pred EEEEecChhhHHHHHHcCCcEEEEecCCCCc
Q 010305 480 ILFVTDVYQEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 480 ~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
|+||||+..|+++|+++||.+|+|.||+.+.
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~ 252 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTKSSYTAD 252 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEccCCccc
Confidence 9999999999999999999999999998754
No 66
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.88 E-value=7.7e-22 Score=181.17 Aligned_cols=100 Identities=29% Similarity=0.422 Sum_probs=95.0
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...++||+.++|+.|+++|++++++||++...+...++++ ++.++|+.++ ++.+..||+|++|..++++++++ |
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~---~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~-p 150 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERL---GLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIP-P 150 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHT---THGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSS-G
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCccccccccccc---ccccccccccccchhhhhhhHHHHHHHHHHHcCCC-c
Confidence 4589999999999999999999999999999999999999 9999999988 55777899999999999999997 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcEEEE
Q 010305 478 SEILFVTDVYQEATAAKAAGKELFVI 503 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~i~v 503 (513)
++|+||||+..|+++|+++||.+|+|
T Consensus 151 ~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 151 EEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp GGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred ceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 99999999999999999999999986
No 67
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.88 E-value=7.4e-22 Score=192.16 Aligned_cols=99 Identities=17% Similarity=0.083 Sum_probs=88.5
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...+|||+.++|+.|++. ++++|+||++.. ++++ |+.++|+.++ ++....||+|++|..+++++|++ |
T Consensus 111 ~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~---gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~-~ 180 (238)
T PRK10748 111 RIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELF---GLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVP-I 180 (238)
T ss_pred cCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHC---CcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCC-h
Confidence 357999999999999975 999999998865 3667 9999999998 55677899999999999999997 9
Q ss_pred CcEEEEecCh-hhHHHHHHcCCcEEEEecCCC
Q 010305 478 SEILFVTDVY-QEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 478 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~G~~ 508 (513)
++|+||||++ .|+++|+++||++++|..+..
T Consensus 181 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~ 212 (238)
T PRK10748 181 GEILHVGDDLTTDVAGAIRCGMQACWINPENG 212 (238)
T ss_pred hHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCc
Confidence 9999999995 999999999999999987543
No 68
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.88 E-value=6.8e-22 Score=184.73 Aligned_cols=97 Identities=24% Similarity=0.369 Sum_probs=88.7
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccC----CCCCHHHHHHHHHHcC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVG----NKRETPSYVEITNSLG 473 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~----~KP~p~~~~~~l~~l~ 473 (513)
...++||+.++|+.|+ ++++|+||++...+...++.+ |+.++|+.++ ++... .||+|++|+.+++++|
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~---gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~ 155 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRL---GIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAG 155 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHc---CcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhC
Confidence 3479999999999998 479999999999999999999 9999999988 33444 5999999999999999
Q ss_pred CCCCCcEEEEecChhhHHHHHHcCCcEEEE
Q 010305 474 VDKPSEILFVTDVYQEATAAKAAGKELFVI 503 (513)
Q Consensus 474 ~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 503 (513)
++ |++|+||||+..|+++|+++||++|+|
T Consensus 156 ~~-~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 156 VD-PERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred CC-ccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 98 999999999999999999999999875
No 69
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.87 E-value=1e-21 Score=209.07 Aligned_cols=104 Identities=22% Similarity=0.238 Sum_probs=93.8
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee-ecccCCCCCHHHHHHHHHHcCCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPS 478 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~l~~l~~~~p~ 478 (513)
...+|||+.++|+.|+++|++++|+||++...+..+++++ ++.+||+.++ .+....||+|++|..+++++ + |+
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~---~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l--~-~~ 401 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYY---DLDQWVTETFSIEQINSLNKSDLVKSILNKY--D-IK 401 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHC---CcHhhcceeEecCCCCCCCCcHHHHHHHHhc--C-cc
Confidence 4589999999999999999999999999999999999999 9999999988 32234578889999999885 4 77
Q ss_pred cEEEEecChhhHHHHHHcCCcEEEEecCCCC
Q 010305 479 EILFVTDVYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 479 ~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
+|+||||+.+|+++|+++||.+|++.||+..
T Consensus 402 ~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~ 432 (459)
T PRK06698 402 EAAVVGDRLSDINAAKDNGLIAIGCNFDFAQ 432 (459)
T ss_pred eEEEEeCCHHHHHHHHHCCCeEEEEeCCCCc
Confidence 9999999999999999999999999999864
No 70
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.87 E-value=4.7e-22 Score=189.91 Aligned_cols=104 Identities=16% Similarity=0.152 Sum_probs=90.3
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHH--HHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA--QRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVD 475 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~--~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~ 475 (513)
...++||+.++|+.|+++|++++|+||++... ....+... ++..+||.++ ++....||+|++|+.+++++|++
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~---~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~ 168 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPG---DIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVA 168 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhh---hhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCC
Confidence 35799999999999999999999999987543 33334455 7889999988 44667899999999999999998
Q ss_pred CCCcEEEEecChhhHHHHHHcCCcEEEEecCC
Q 010305 476 KPSEILFVTDVYQEATAAKAAGKELFVILDGW 507 (513)
Q Consensus 476 ~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~ 507 (513)
|++|+||||+..|+++|+++||.+|++.++.
T Consensus 169 -~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~ 199 (211)
T TIGR02247 169 -PEECVFLDDLGSNLKPAAALGITTIKVSDEE 199 (211)
T ss_pred -HHHeEEEcCCHHHHHHHHHcCCEEEEECCHH
Confidence 9999999999999999999999999998654
No 71
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.87 E-value=4e-21 Score=178.69 Aligned_cols=98 Identities=24% Similarity=0.319 Sum_probs=90.7
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCCC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 478 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p~ 478 (513)
..++||+.++|+.|+++|++++|+||++... ..++.++ ++..+|+.++ ++....||+|++|..++++++++ |+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~~ 158 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQEL---GLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLK-PE 158 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhc---CCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCC-cc
Confidence 5799999999999999999999999999888 6666668 9999999988 45678899999999999999998 99
Q ss_pred cEEEEecChhhHHHHHHcCCcEEEE
Q 010305 479 EILFVTDVYQEATAAKAAGKELFVI 503 (513)
Q Consensus 479 ~~l~VGDs~~Di~aA~~aG~~~i~v 503 (513)
+|+||||+..|+++|+++|+.+|+|
T Consensus 159 ~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 159 ECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred eEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 9999999999999999999999975
No 72
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=99.87 E-value=4.4e-21 Score=176.24 Aligned_cols=221 Identities=48% Similarity=0.734 Sum_probs=204.6
Q ss_pred CCCCeEEEEcccccccccccccccchhhHhhhHHHHHhhhcCChhhHHHHHHHHHHhHHhhhcccCCcccCCCCCCChHH
Q 010305 281 GLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360 (513)
Q Consensus 281 ~~~ikavlFDlDGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (513)
..+.+.++.|++||.++..++.+.+|||+.+.+..++...|+.+...+.+..+++....+. ....+.++++....+.+.
T Consensus 5 ~~~~k~~llDIegttt~isfVkd~LFpya~~nV~~~v~~~~~~~~~~~iv~~l~~~~~e~~-~~~~~~v~i~~~~~~~e~ 83 (254)
T KOG2630|consen 5 VRKWKELLLDIEGTTTSISFVKDVLFPYAKENVEELVQEPYETKIGQEIVSELRQRPEEQL-GSTNNIVPITDVTAAEEA 83 (254)
T ss_pred hhhhhhheEeEEeeecchHHHHHhhhHHHHHHHHHHhcCccccchHHHHHHHHhhhHHHHh-ccccCcccccccchhhhh
Confidence 3467899999999999999999999999999999999999999999999999999887777 677788888888777766
Q ss_pred HHHHHHHHHHHHHhhhcchhhHHHhhHHHHHHHhhcCcccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccC
Q 010305 361 VIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 440 (513)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~ 440 (513)
.+. ..+++++++.+++.+.+++++|.+|+.+|+.+......|+++..+++..+..|++++|.|+++...++.+..+.+
T Consensus 84 ~v~--v~~v~~~~~~d~k~t~~K~lQg~iw~~gy~sg~lk~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~ 161 (254)
T KOG2630|consen 84 DVH--VANVEKLISFDEKRTILKQLQGRIWAAGYESGELKAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSD 161 (254)
T ss_pred hhH--HHHHHHHHhhhcccchhHHHHHHHHHhhcccccccccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccC
Confidence 666 677789999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEec
Q 010305 441 YGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILD 505 (513)
Q Consensus 441 ~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 505 (513)
.+++..|++++||...+.|-....|..|.+.+|.+ |.+++|.-|-+....+|+.+|+.+.++..
T Consensus 162 ~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s-~~eiLfLTd~~~Ea~aa~~aGl~a~l~~r 225 (254)
T KOG2630|consen 162 AGDLRKYISGYFDTTIGLKVESQSYKKIGHLIGKS-PREILFLTDVPREAAAARKAGLQAGLVSR 225 (254)
T ss_pred cchHHHHhhhhhhccccceehhHHHHHHHHHhCCC-hhheEEeccChHHHHHHHhcccceeeeec
Confidence 89999999999998889999999999999999998 99999999999999999999999877763
No 73
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.86 E-value=8.4e-21 Score=179.37 Aligned_cols=90 Identities=13% Similarity=0.166 Sum_probs=82.8
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCCCc
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE 479 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p~~ 479 (513)
.+.+++.++|+.|+++|++++|+||++...++.+++++ |+..+|+.++ ++... ||+|+.|..++++++++ |++
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~-~~~ 180 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTH---GLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVE-ACH 180 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHc---CchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcC-ccc
Confidence 45667799999999999999999999999999999999 9999999888 34445 99999999999999998 999
Q ss_pred EEEEecChhhHHHHHHc
Q 010305 480 ILFVTDVYQEATAAKAA 496 (513)
Q Consensus 480 ~l~VGDs~~Di~aA~~a 496 (513)
|+||||+..|+++|+++
T Consensus 181 ~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 181 AAMVGDTVDDIITGRKA 197 (197)
T ss_pred EEEEeCCHHHHHHHHhC
Confidence 99999999999999975
No 74
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.86 E-value=8.7e-21 Score=179.56 Aligned_cols=104 Identities=18% Similarity=0.239 Sum_probs=93.1
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCCCc
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE 479 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p~~ 479 (513)
.++||+.++|+.|+++|++++|+||++.......+.... ++..+||.++ ++.+..||+|++|+.+++++|++ |++
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~--~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~-p~~ 160 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP--EVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFS-AAD 160 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhch--hHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCC-hhH
Confidence 589999999999999999999999999887766554421 6888999988 56778899999999999999998 999
Q ss_pred EEEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 480 ILFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 480 ~l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
|+||||+..|+++|+++||+++++.++..
T Consensus 161 ~l~vgD~~~di~aA~~aG~~~i~~~~~~~ 189 (199)
T PRK09456 161 AVFFDDNADNIEAANALGITSILVTDKQT 189 (199)
T ss_pred eEEeCCCHHHHHHHHHcCCEEEEecCCcc
Confidence 99999999999999999999999988654
No 75
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.86 E-value=1.8e-20 Score=180.94 Aligned_cols=103 Identities=25% Similarity=0.290 Sum_probs=96.3
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
..+++|++.++|+.|+++ ++++|+||+....+...++++ ||.++||.++ ++.+..||+|++|..+++++|++ |
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~---gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~-p 171 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQL---GLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVP-P 171 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHc---CChhhhheEEEecccccCCCCcHHHHHHHHHcCCC-c
Confidence 357999999999999999 999999999999999999999 9999999999 56778999999999999999998 9
Q ss_pred CcEEEEecCh-hhHHHHHHcCCcEEEEecCC
Q 010305 478 SEILFVTDVY-QEATAAKAAGKELFVILDGW 507 (513)
Q Consensus 478 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~G~ 507 (513)
++|+||||+. +||.+|+++||++||+..+.
T Consensus 172 ~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~ 202 (229)
T COG1011 172 EEALFVGDSLENDILGARALGMKTVWINRGG 202 (229)
T ss_pred ceEEEECCChhhhhHHHHhcCcEEEEECCCC
Confidence 9999999999 78899999999999998754
No 76
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.85 E-value=1.4e-20 Score=216.41 Aligned_cols=103 Identities=21% Similarity=0.254 Sum_probs=97.1
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcc-cccceee--ecccCCCCCHHHHHHHHHHcCCCCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 478 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~-~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p~ 478 (513)
.+|||+.++|+.|+++|++++|+||+....++..++++ ++. .+|+.++ ++....||+|++|+.++++++++ |+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~---gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~-p~ 236 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAA---GLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVP-TS 236 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHc---CCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcC-cc
Confidence 58999999999999999999999999999999999999 885 7899998 55677899999999999999998 99
Q ss_pred cEEEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 479 EILFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 479 ~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
+|+||||+..|+++|+++||++|+|.||+.
T Consensus 237 e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~ 266 (1057)
T PLN02919 237 ECVVIEDALAGVQAARAAGMRCIAVTTTLS 266 (1057)
T ss_pred cEEEEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence 999999999999999999999999999874
No 77
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.82 E-value=1.7e-19 Score=170.45 Aligned_cols=100 Identities=14% Similarity=0.174 Sum_probs=83.5
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccc----eeeecccCCCCCHHHHHHHHHHcCCCC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS----GFFDTAVGNKRETPSYVEITNSLGVDK 476 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd----~i~~~~~~~KP~p~~~~~~l~~l~~~~ 476 (513)
..+|||+.++|+.|++. ++++++||++.......++.+ ++..+|+ .++.. ...||+|++|+.+++++|
T Consensus 73 ~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~---~l~~~f~~~f~~i~~~-~~~~~kp~~~~~a~~~~~--- 144 (197)
T PHA02597 73 LSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQF---NLNALFPGAFSEVLMC-GHDESKEKLFIKAKEKYG--- 144 (197)
T ss_pred ccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhC---CHHHhCCCcccEEEEe-ccCcccHHHHHHHHHHhC---
Confidence 46999999999999997 578899998877776677777 7776554 44421 124788999999999998
Q ss_pred CCcEEEEecChhhHHHHHHc--CCcEEEEecCCC
Q 010305 477 PSEILFVTDVYQEATAAKAA--GKELFVILDGWM 508 (513)
Q Consensus 477 p~~~l~VGDs~~Di~aA~~a--G~~~i~v~~G~~ 508 (513)
|++|+||||+..|+++|+++ ||++|++.||+.
T Consensus 145 ~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~ 178 (197)
T PHA02597 145 DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER 178 (197)
T ss_pred CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh
Confidence 57899999999999999999 999999999975
No 78
>PLN02811 hydrolase
Probab=99.82 E-value=1.5e-19 Score=173.87 Aligned_cols=106 Identities=17% Similarity=0.272 Sum_probs=93.2
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHH-HHhccCCCCcccccceee--e--cccCCCCCHHHHHHHHHHcC-
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRL-IFGNSNYGDLRKYLSGFF--D--TAVGNKRETPSYVEITNSLG- 473 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~-~l~~~~~~gl~~~fd~i~--~--~~~~~KP~p~~~~~~l~~l~- 473 (513)
...+|||+.++|+.|+++|++++|+||++...... .++.. ++.++|+.++ + +....||+|++|+.++++++
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~---~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~ 152 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHG---ELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFED 152 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccH---HHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCC
Confidence 45789999999999999999999999998764443 44445 7889999888 4 45678999999999999997
Q ss_pred --CCCCCcEEEEecChhhHHHHHHcCCcEEEEecCCCC
Q 010305 474 --VDKPSEILFVTDVYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 474 --~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
++ |++|+||||+..|+++|+++||++|+|.||+.+
T Consensus 153 ~~~~-~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~ 189 (220)
T PLN02811 153 GPVD-PGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLD 189 (220)
T ss_pred CCCC-ccceEEEeccHhhHHHHHHCCCeEEEEeCCCCc
Confidence 97 999999999999999999999999999999854
No 79
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.81 E-value=1.4e-19 Score=167.93 Aligned_cols=102 Identities=19% Similarity=0.234 Sum_probs=85.8
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchH---------------HHHHHHHhccCCCCcccccceeee-------------
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFFD------------- 453 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~---------------~~~~~~l~~~~~~gl~~~fd~i~~------------- 453 (513)
.+|||+.++|++|+++|++++|+||++. ......+..+ ++. |+.++.
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~--~~~i~~~~~~~~~~~~~~~ 100 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAER---DVD--LDGIYYCPHHPEGVEEFRQ 100 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc---CCC--ccEEEECCCCCcccccccC
Confidence 5899999999999999999999999985 2333455555 444 666541
Q ss_pred cccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcE-EEEecCCCC
Q 010305 454 TAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKEL-FVILDGWMQ 509 (513)
Q Consensus 454 ~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~-i~v~~G~~~ 509 (513)
+....||+|++|..++++++++ |++|+||||+..|+++|+++|+.+ ++|.||+..
T Consensus 101 ~~~~~KP~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~ 156 (176)
T TIGR00213 101 VCDCRKPKPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPI 156 (176)
T ss_pred CCCCCCCCHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcc
Confidence 2346799999999999999998 999999999999999999999998 899999863
No 80
>PRK06769 hypothetical protein; Validated
Probab=99.81 E-value=1.1e-19 Score=167.95 Aligned_cols=104 Identities=13% Similarity=0.136 Sum_probs=87.7
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHH--------HHHHHHhccCCCCcccccceee---ecccCCCCCHHHHHHHHH
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRL--------AQRLIFGNSNYGDLRKYLSGFF---DTAVGNKRETPSYVEITN 470 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~--------~~~~~l~~~~~~gl~~~fd~i~---~~~~~~KP~p~~~~~~l~ 470 (513)
.+|||+.++|++|+++|++++|+||++.. .....++.+ ++..+|.... ++....||+|++|+++++
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~ 104 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGF---GFDDIYLCPHKHGDGCECRKPSTGMLLQAAE 104 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhC---CcCEEEECcCCCCCCCCCCCCCHHHHHHHHH
Confidence 48999999999999999999999998752 123346666 7666554433 234678999999999999
Q ss_pred HcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCCCC
Q 010305 471 SLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 471 ~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
+++++ |++|+||||+..|+++|+++|+.+|+|.||+..
T Consensus 105 ~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~ 142 (173)
T PRK06769 105 KHGLD-LTQCAVIGDRWTDIVAAAKVNATTILVRTGAGY 142 (173)
T ss_pred HcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCc
Confidence 99997 999999999999999999999999999999854
No 81
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.81 E-value=7.3e-20 Score=169.42 Aligned_cols=86 Identities=23% Similarity=0.290 Sum_probs=79.0
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...++||+.++|+ +++|+||++...+...++++ ++..+|+.++ ++....||+|++|+.+++++|++ |
T Consensus 88 ~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~---~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~-p 156 (175)
T TIGR01493 88 NLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQA---GLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLP-P 156 (175)
T ss_pred cCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHC---CCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCC-H
Confidence 4579999999999 38999999999999999999 9999999988 45678899999999999999998 9
Q ss_pred CcEEEEecChhhHHHHHHc
Q 010305 478 SEILFVTDVYQEATAAKAA 496 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~a 496 (513)
++|+||||+..|+++|+++
T Consensus 157 ~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 157 DRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHeEeEecChhhHHHHhcC
Confidence 9999999999999999874
No 82
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.81 E-value=1.1e-19 Score=163.68 Aligned_cols=101 Identities=23% Similarity=0.214 Sum_probs=84.7
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchH---------------HHHHHHHhccCCCCcccc--cceee---ecccCCCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKY--LSGFF---DTAVGNKRE 461 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~---------------~~~~~~l~~~~~~gl~~~--fd~i~---~~~~~~KP~ 461 (513)
.+|||+.++|+.|+++|++++|+||++. ..+...++++ ++... |.... +.....||+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~l~~~~~~~~~~~~~~~~~~~KP~ 103 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQL---GVAVDGVLFCPHHPADNCSCRKPK 103 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhC---CCceeEEEECCCCCCCCCCCCCCC
Confidence 4899999999999999999999999874 4566677888 77521 21111 224557999
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecC
Q 010305 462 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 462 p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G 506 (513)
|++|+.++++++++ |++|+||||+..|+++|+++||++|+|..|
T Consensus 104 ~~~~~~~~~~~~~~-~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 104 PGLILEALKRLGVD-ASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 99999999999998 999999999999999999999999999765
No 83
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.80 E-value=6.7e-19 Score=159.45 Aligned_cols=91 Identities=30% Similarity=0.438 Sum_probs=81.9
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
....+||+.++|+.|+++|++++|+||++...+...++.+ +..+|+.++ ++.. .||+|++|..++++++++ |
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~----l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~-~ 135 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH----LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLP-P 135 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH----HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCC-C
Confidence 3467899999999999999999999999999999888865 567888887 4455 899999999999999998 8
Q ss_pred CcEEEEecChhhHHHHHHcC
Q 010305 478 SEILFVTDVYQEATAAKAAG 497 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG 497 (513)
+|+||||+..|+++|+++|
T Consensus 136 -~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 136 -EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred -CEEEEeCCHHHHHHHHHcc
Confidence 9999999999999999997
No 84
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.80 E-value=4.6e-19 Score=165.21 Aligned_cols=102 Identities=19% Similarity=0.176 Sum_probs=87.1
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchH---------------HHHHHHHhccCCCCcccccceee-e------cccCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFF-D------TAVGNK 459 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~---------------~~~~~~l~~~~~~gl~~~fd~i~-~------~~~~~K 459 (513)
.++||+.++|++|+++|++++|+||++. ......++++ ++ +|+.++ . +....|
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~--~f~~i~~~~~~~~~~~~~~K 103 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADR---GG--RLDGIYYCPHHPEDGCDCRK 103 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc---CC--ccceEEECCCCCCCCCcCCC
Confidence 5899999999999999999999999973 2334456666 55 377665 1 235689
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCCCC
Q 010305 460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 460 P~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
|+|++|..+++++|++ |++|+||||+..|+++|+++|+.++++.||+..
T Consensus 104 P~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~ 152 (181)
T PRK08942 104 PKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGV 152 (181)
T ss_pred CCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCc
Confidence 9999999999999997 999999999999999999999999999999853
No 85
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.80 E-value=1.1e-18 Score=165.51 Aligned_cols=104 Identities=19% Similarity=0.208 Sum_probs=94.2
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
.....+++.++++.||++|+.++++||.+.... .++..+ ++..|||.++ ...+..||+|.+|+.+++++++. |
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~---~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~-P 185 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPL---GLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVK-P 185 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhcc---CHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCC-h
Confidence 347888999999999999999999999998765 788888 9999999999 56788999999999999999998 9
Q ss_pred CcEEEEecCh-hhHHHHHHcCCcEEEEecCCC
Q 010305 478 SEILFVTDVY-QEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 478 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~G~~ 508 (513)
++|++|||+. +|+++|+++||++++|...-+
T Consensus 186 ee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~ 217 (237)
T KOG3085|consen 186 EECVHIGDLLENDYEGARNLGWHAILVDNSIT 217 (237)
T ss_pred HHeEEecCccccccHhHHHcCCEEEEEccccc
Confidence 9999999999 899999999999999975433
No 86
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.79 E-value=1.9e-19 Score=165.12 Aligned_cols=105 Identities=14% Similarity=0.109 Sum_probs=93.3
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCc-hHHHHHHHHhccCCCCcc---------cccceee--ecccCCCCCHHHHHHH
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSG-SRLAQRLIFGNSNYGDLR---------KYLSGFF--DTAVGNKRETPSYVEI 468 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~-~~~~~~~~l~~~~~~gl~---------~~fd~i~--~~~~~~KP~p~~~~~~ 468 (513)
..+|||+.++|+.|+++|++++|+||+ +...++.+++.+ ++. ++|+.++ ++....||.|.++..+
T Consensus 44 ~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~---~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~ 120 (174)
T TIGR01685 44 VTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTF---EITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKV 120 (174)
T ss_pred EEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhC---CcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHh
Confidence 479999999999999999999999998 888889999999 888 9999988 3444567777777777
Q ss_pred HHHc--CCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCCCC
Q 010305 469 TNSL--GVDKPSEILFVTDVYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 469 l~~l--~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
.+.+ +++ |++|+||||++.|+++|+++|+.++++.||+..
T Consensus 121 ~~~~~~gl~-p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~~ 162 (174)
T TIGR01685 121 NKVDPSVLK-PAQILFFDDRTDNVREVWGYGVTSCYCPSGMDK 162 (174)
T ss_pred hhcccCCCC-HHHeEEEcChhHhHHHHHHhCCEEEEcCCCccH
Confidence 7777 797 999999999999999999999999999999853
No 87
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.78 E-value=1.1e-18 Score=154.08 Aligned_cols=96 Identities=22% Similarity=0.312 Sum_probs=85.0
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCch--------HHHHHHHHhccCCCCcccccceee-ecccCCCCCHHHHHHHHHHc
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGS--------RLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSL 472 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~--------~~~~~~~l~~~~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~l~~l 472 (513)
.+|||+.++|+.|+++|++++|+||++ .......++++ ++.. +.++ .. ...||+|++|+.+++++
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~---~l~~--~~~~~~~-~~~KP~~~~~~~~~~~~ 98 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEEL---GVPI--DVLYACP-HCRKPKPGMFLEALKRF 98 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHC---CCCE--EEEEECC-CCCCCChHHHHHHHHHc
Confidence 489999999999999999999999999 78888899998 7753 3333 33 57799999999999999
Q ss_pred -CCCCCCcEEEEec-ChhhHHHHHHcCCcEEEEe
Q 010305 473 -GVDKPSEILFVTD-VYQEATAAKAAGKELFVIL 504 (513)
Q Consensus 473 -~~~~p~~~l~VGD-s~~Di~aA~~aG~~~i~v~ 504 (513)
+++ |++|+|||| +..|+++|+++|+.+|++.
T Consensus 99 ~~~~-~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 99 NEID-PEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred CCCC-hhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 597 999999999 6899999999999999985
No 88
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.77 E-value=2.4e-18 Score=156.79 Aligned_cols=101 Identities=14% Similarity=0.066 Sum_probs=89.3
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCch---------------HHHHHHHHhccCCCCcccccceee-------ecccCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGS---------------RLAQRLIFGNSNYGDLRKYLSGFF-------DTAVGNK 459 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~---------------~~~~~~~l~~~~~~gl~~~fd~i~-------~~~~~~K 459 (513)
.+|||+.++|+.|+++|++++|+||++ ...+..+++.+ |+. |+.++ ++....|
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~---gl~--fd~ii~~~~~~~~~~~~~K 103 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQ---GII--FDDVLICPHFPDDNCDCRK 103 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHC---CCc--eeEEEECCCCCCCCCCCCC
Confidence 589999999999999999999999973 55677888888 886 76553 3456789
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 460 P~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
|+|++|..++++++++ |++|+||||+..|+++|+++||+++++.+|--
T Consensus 104 P~~~~~~~~~~~~~~~-~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~~ 151 (161)
T TIGR01261 104 PKIKLLEPYLKKNLID-KARSYVIGDRETDMQLAENLGIRGIQYDEEEL 151 (161)
T ss_pred CCHHHHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCeEEEEChhhc
Confidence 9999999999999998 99999999999999999999999999997643
No 89
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.77 E-value=6.9e-18 Score=162.47 Aligned_cols=99 Identities=13% Similarity=0.120 Sum_probs=84.3
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCc----hHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSG----SRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGV 474 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~----~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~ 474 (513)
..+++++.++|+.|+++|++++++||+ ....++.+++++ |+..+|+.++ ++...+||+|. .+++++++
T Consensus 113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~l---Gi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i 186 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNF---HIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNI 186 (237)
T ss_pred CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHh---CCchheeEEECCCCCCCCCCCHH---HHHHhCCC
Confidence 367888999999999999999999998 677888899999 9999999888 33445677775 34555554
Q ss_pred CCCCcEEEEecChhhHHHHHHcCCcEEEEecCCCCc
Q 010305 475 DKPSEILFVTDVYQEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 475 ~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
++||||+.+|+.+|+++|++++.|.|||++-
T Consensus 187 -----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s~ 217 (237)
T TIGR01672 187 -----RIHYGDSDNDITAAKEAGARGIRILRASNST 217 (237)
T ss_pred -----eEEEeCCHHHHHHHHHCCCCEEEEEecCCCC
Confidence 7999999999999999999999999999864
No 90
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.76 E-value=5.4e-18 Score=162.77 Aligned_cols=96 Identities=18% Similarity=0.198 Sum_probs=84.6
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee------------ecccCCCCCHHHHHHH
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------DTAVGNKRETPSYVEI 468 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~------------~~~~~~KP~p~~~~~~ 468 (513)
.+++||+.++|+.|+++|++++|+||+....+..+++.+ ++..+|...+ ......+|+|.+|..+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 160 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKL---GLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLIL 160 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc---CCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHH
Confidence 469999999999999999999999999999999999999 8888885432 1122346799999999
Q ss_pred HHHcCCCCCCcEEEEecChhhHHHHHHcCCcE
Q 010305 469 TNSLGVDKPSEILFVTDVYQEATAAKAAGKEL 500 (513)
Q Consensus 469 l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~ 500 (513)
+++++++ |++|+||||+.+|+++|+++|+..
T Consensus 161 ~~~~~~~-~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 161 LRKEGIS-PENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred HHHcCCC-HHHEEEEECCHHHHHHHHhCCCeE
Confidence 9999997 999999999999999999999975
No 91
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.75 E-value=1.4e-17 Score=157.41 Aligned_cols=103 Identities=15% Similarity=0.035 Sum_probs=86.8
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCC----------CHHHHHHH
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKR----------ETPSYVEI 468 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP----------~p~~~~~~ 468 (513)
..++||+.++|+.|+++|++++|+||+....++.+++++ |+..+|+..+ ++.+..|| +++.+..+
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~ 155 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKL---NPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL 155 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHh---CCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence 479999999999999999999999999999999999999 8888777655 22333333 34688899
Q ss_pred HHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCC
Q 010305 469 TNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDGW 507 (513)
Q Consensus 469 l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~ 507 (513)
+++++++ |++|+||||+.+|+++|+++|+.++....+.
T Consensus 156 ~~~~~~~-~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 156 KRELNPS-LTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred HHHhCCC-HHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 9999997 9999999999999999999999876655444
No 92
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.74 E-value=3.1e-17 Score=155.27 Aligned_cols=107 Identities=21% Similarity=0.266 Sum_probs=94.8
Q ss_pred cCcccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--e--cccCCCCCHHHHHHHHHH
Q 010305 396 SNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D--TAVGNKRETPSYVEITNS 471 (513)
Q Consensus 396 ~~~~~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~--~~~~~KP~p~~~~~~l~~ 471 (513)
+......+.||+.++++.|+.+|++++++|+.++......++++. ++...|..++ + +....||+|++|+.++++
T Consensus 86 ~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~--~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~ 163 (222)
T KOG2914|consen 86 RLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHE--DIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKR 163 (222)
T ss_pred HhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhh--HHHHhcCCCeecCCccccCCCCCchHHHHHHHh
Confidence 334456899999999999999999999999999999999998882 4778888766 2 366779999999999999
Q ss_pred cCCCCC-CcEEEEecChhhHHHHHHcCCcEEEEec
Q 010305 472 LGVDKP-SEILFVTDVYQEATAAKAAGKELFVILD 505 (513)
Q Consensus 472 l~~~~p-~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 505 (513)
+|.. | +.|++++|++.++++|++|||++|+|..
T Consensus 164 l~~~-~~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 164 LGVP-PPSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred cCCC-CccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 9997 6 9999999999999999999999999976
No 93
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.73 E-value=1.7e-17 Score=152.11 Aligned_cols=94 Identities=15% Similarity=0.241 Sum_probs=81.1
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHH------------HHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHH
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRL------------AQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI 468 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~------------~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~ 468 (513)
+|||+.++|+.|+++|++++|+||++.. .+..+++++ ++.. +.++ +.....||+|++|..+
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~---gl~~--~~ii~~~~~~~~KP~p~~~~~~ 117 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKL---KVPI--QVLAATHAGLYRKPMTGMWEYL 117 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHc---CCCE--EEEEecCCCCCCCCccHHHHHH
Confidence 7899999999999999999999999864 467788888 7743 3444 3344679999999999
Q ss_pred HHHcC--CCCCCcEEEEecCh--------hhHHHHHHcCCcEEE
Q 010305 469 TNSLG--VDKPSEILFVTDVY--------QEATAAKAAGKELFV 502 (513)
Q Consensus 469 l~~l~--~~~p~~~l~VGDs~--------~Di~aA~~aG~~~i~ 502 (513)
+++++ ++ |++|+||||+. .|+++|+++|+.+++
T Consensus 118 ~~~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 118 QSQYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HHHcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 99999 97 99999999996 699999999999875
No 94
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.73 E-value=3.3e-17 Score=151.01 Aligned_cols=99 Identities=11% Similarity=0.145 Sum_probs=86.8
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCch-HHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcE
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGS-RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 480 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~-~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~ 480 (513)
.+|||+.++|+.|+++|++++|+||++ ...+..+++.+ ++..++ ...||+|++|..++++++++ |++|
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~---gl~~~~-------~~~KP~p~~~~~~l~~~~~~-~~~~ 111 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL---GIPVLP-------HAVKPPGCAFRRAHPEMGLT-SEQV 111 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc---CCEEEc-------CCCCCChHHHHHHHHHcCCC-HHHE
Confidence 378999999999999999999999998 56667777777 654321 34699999999999999998 9999
Q ss_pred EEEecCh-hhHHHHHHcCCcEEEEecCCCCcC
Q 010305 481 LFVTDVY-QEATAAKAAGKELFVILDGWMQVH 511 (513)
Q Consensus 481 l~VGDs~-~Di~aA~~aG~~~i~v~~G~~~~~ 511 (513)
+||||+. .|+++|+++||.+|+|.||+.+.+
T Consensus 112 l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~ 143 (170)
T TIGR01668 112 AVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQ 143 (170)
T ss_pred EEECCcchHHHHHHHHcCCeEEEEccCcCCcc
Confidence 9999998 799999999999999999997764
No 95
>COG3347 Uncharacterized conserved protein [Function unknown]
Probab=99.73 E-value=4e-17 Score=160.59 Aligned_cols=190 Identities=16% Similarity=0.162 Sum_probs=144.3
Q ss_pred HHHHHHHHHHH-HcCCccccCCceeEEeCCCCC-CCCccEEEEeccCCCCCCCCCCCEEEEeCCCC--e-ecC-------
Q 010305 32 VLISELCRHFY-TLGWVSGTGGSITIKVHDDSI-PKPQQLILMSPSGVQKERMEPEDMYVLSGNGT--T-LSS------- 99 (513)
Q Consensus 32 ~~l~~~~r~l~-~~gl~~~~~GNiSvR~~~~~~-~~~~~~~litpsG~~~~~l~~~div~vd~~g~--~-~~g------- 99 (513)
.+++-..|.+. +..++...|||.|+++.+..+ .++-+.|||+.||.+++.++.+.++-|.++-- . ..+
T Consensus 18 ~~lvY~S~liGsdp~lv~~GGGNTS~K~~~~dl~G~~v~vmwVKgSG~dl~ti~~~gf~~v~l~~Ll~l~~~~~~~d~eM 97 (404)
T COG3347 18 ELLVYRSRLIGSDPDLVLHGGGNTSVKTGETDLVGEEVEVLWVKGSGWDLATIKADGFVPVRLDPLLALKKLDKLPDEEM 97 (404)
T ss_pred HHHHHHHhhhcCChhheecCCCccceeeeccccCCceeEEEEEeccccchhhhccCCCcccchHhHHHHHhcCCCCHHHH
Confidence 34555555553 337788889999999976311 23345789999999999999999988876530 0 111
Q ss_pred ------CCCCCCCCCCCCCCCchHHHHHHHHhcCccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhcCCcccccce
Q 010305 100 ------PSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELV 173 (513)
Q Consensus 100 ------~~~~p~~~~p~~~S~E~~lH~~iy~~~d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 173 (513)
.-..| +.|+||.|+.+|..+ +.+.|.|+|+...++++++... .+.++.+.|. .
T Consensus 98 V~~l~~~~~n~---~~PrPSIET~LHAfl----P~k~VdHtH~dAiiaIa~~~n~--------~~l~~~I~Gd------~ 156 (404)
T COG3347 98 VGYLRHCMLNP---SAPRPSIETLLHAFL----PFKVVDHTHADAIIAIAVQANG--------KALIREIFGD------R 156 (404)
T ss_pred HHHHHHhhcCC---CCCCcchhhhhHhhc----CcccccccCccceeeeccCCCH--------HHHHHHhcCC------e
Confidence 00122 234679999999999 9999999999999999887532 1233334342 3
Q ss_pred eeeecCCCCchHHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 010305 174 VPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW 244 (513)
Q Consensus 174 vpv~~~~~~~~~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~ 244 (513)
+.++||....-+|+..+++.++.+|+..+++|.|||+++||+|-++||+++..+-.-|+-++..+ |++.
T Consensus 157 ~~~vPYvrPGf~La~~iae~~~~~p~~~glvL~~HGL~t~gdtak~~Ye~~I~~V~~Ae~~l~~~--~g~~ 225 (404)
T COG3347 157 VVWVPYVRPGFPLAKAIAERFKANPDAEGLVLENHGLFTFGDTAKEAYERMISIVNEAEEYLARR--GGKV 225 (404)
T ss_pred EEEEeccCCCchHHHHHHHHHhhCCCceEEEeccccceEecccHHHHHHHHHHHHHHHHHHHHhh--CCcc
Confidence 77788875578899999999999999999999999999999999999999999999999888776 4443
No 96
>PLN02954 phosphoserine phosphatase
Probab=99.72 E-value=2.4e-16 Score=151.81 Aligned_cols=100 Identities=19% Similarity=0.272 Sum_probs=81.5
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcc--cccceee--ec------------ccCCCCCHHH
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR--KYLSGFF--DT------------AVGNKRETPS 464 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~--~~fd~i~--~~------------~~~~KP~p~~ 464 (513)
..++||+.++|+.|+++|++++|+||+....++.+++.+ ++. .+|...+ +. ....+|+|+.
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~---gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~ 159 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAIL---GIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEA 159 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHh---CCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHH
Confidence 468999999999999999999999999999999999999 886 3564311 11 1234678899
Q ss_pred HHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCC
Q 010305 465 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDGW 507 (513)
Q Consensus 465 ~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~ 507 (513)
+..++++++. ++|+||||+.+|+++|+++|+.++.. ||+
T Consensus 160 i~~~~~~~~~---~~~i~iGDs~~Di~aa~~~~~~~~~~-~~~ 198 (224)
T PLN02954 160 VQHIKKKHGY---KTMVMIGDGATDLEARKPGGADLFIG-YGG 198 (224)
T ss_pred HHHHHHHcCC---CceEEEeCCHHHHHhhhcCCCCEEEe-cCC
Confidence 9999998875 48999999999999999988886654 554
No 97
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.64 E-value=3.1e-15 Score=143.78 Aligned_cols=98 Identities=13% Similarity=0.077 Sum_probs=78.0
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccccc--ceee--ecccCCCCCHHH----------HH
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFF--DTAVGNKRETPS----------YV 466 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~f--d~i~--~~~~~~KP~p~~----------~~ 466 (513)
..++||+.++|+.|+++|++++|+||+....++.+++++ ... ...+ +..+ +.....||+|.. ..
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~-~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~ 150 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK-EQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKP 150 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc-CcEEEeEEEecCCeeEEeccCCccccccccCCCchH
Confidence 579999999999999999999999999999999988875 111 1222 2233 223456787764 35
Q ss_pred HHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEE
Q 010305 467 EITNSLGVDKPSEILFVTDVYQEATAAKAAGKELF 501 (513)
Q Consensus 467 ~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i 501 (513)
.++++++.. +++|+||||+.+|+.+|++||+.++
T Consensus 151 ~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 151 SLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred HHHHHhccC-CCCEEEEeCCHHHHHHHHHCCccee
Confidence 799999997 9999999999999999999999443
No 98
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.64 E-value=1.8e-15 Score=145.65 Aligned_cols=100 Identities=12% Similarity=0.114 Sum_probs=82.2
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCc----hHHHHHHHHhccCCCCc--ccccceeeecccCCCCCHHHHHHHHHHcC
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSG----SRLAQRLIFGNSNYGDL--RKYLSGFFDTAVGNKRETPSYVEITNSLG 473 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~----~~~~~~~~l~~~~~~gl--~~~fd~i~~~~~~~KP~p~~~~~~l~~l~ 473 (513)
...++||+.++|+.|+++|++++++||. .....+.+++.+ ++ .++|+.++......||++.. ++++++
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~---gip~~~~f~vil~gd~~~K~~K~~---~l~~~~ 185 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDF---HIPADNMNPVIFAGDKPGQYTKTQ---WLKKKN 185 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHc---CCCcccceeEEEcCCCCCCCCHHH---HHHhcC
Confidence 3579999999999999999999999995 455777777778 88 88898887322246787754 445544
Q ss_pred CCCCCcEEEEecChhhHHHHHHcCCcEEEEecCCCCc
Q 010305 474 VDKPSEILFVTDVYQEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 474 ~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
+ ++||||+.+|+++|++||+.+|.|.|||++.
T Consensus 186 i-----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~~~ 217 (237)
T PRK11009 186 I-----RIFYGDSDNDITAAREAGARGIRILRAANST 217 (237)
T ss_pred C-----eEEEcCCHHHHHHHHHcCCcEEEEecCCCCC
Confidence 3 7999999999999999999999999999864
No 99
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.64 E-value=3.5e-15 Score=136.80 Aligned_cols=101 Identities=15% Similarity=0.218 Sum_probs=90.6
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ec------ccCCCCCHHHHHHHHHHc
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DT------AVGNKRETPSYVEITNSL 472 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~------~~~~KP~p~~~~~~l~~l 472 (513)
..+-+-.+.+|-.|+.++ ..++||..+..+.++++.+ |+.++|+.++ +. ....||.++.|..+++..
T Consensus 99 LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~L---GieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~a 173 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKL---GIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVA 173 (244)
T ss_pred cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHh---ChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHh
Confidence 467778899999999874 8899999999999999999 9999999988 22 234599999999999999
Q ss_pred CCCCCCcEEEEecChhhHHHHHHcCCcEEEEecC
Q 010305 473 GVDKPSEILFVTDVYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 473 ~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G 506 (513)
|++.|.+++|++||..+|++|++.||++++|.-.
T Consensus 174 gi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~ 207 (244)
T KOG3109|consen 174 GIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGRE 207 (244)
T ss_pred CCCCcCceEEEcCchhhHHHHHhccceeEEEEee
Confidence 9976999999999999999999999999998743
No 100
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.62 E-value=1.1e-15 Score=152.22 Aligned_cols=103 Identities=15% Similarity=0.199 Sum_probs=84.1
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHH-HHHhccCCCCcccccceee-----ecccCCCCCHHHHHHHHHHcCCCC
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR-LIFGNSNYGDLRKYLSGFF-----DTAVGNKRETPSYVEITNSLGVDK 476 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~-~~l~~~~~~gl~~~fd~i~-----~~~~~~KP~p~~~~~~l~~l~~~~ 476 (513)
-|+++.++++.|+++|+ ++|+||++..... ..+... ++..+|+.+. +.....||+|.+|..++++++++
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~---~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~- 218 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTP---GTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSID- 218 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCccc---ChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCC-
Confidence 48999999999999887 8999999874431 222333 5666666554 12345799999999999999998
Q ss_pred CCcEEEEecCh-hhHHHHHHcCCcEEEEecCCCCc
Q 010305 477 PSEILFVTDVY-QEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 477 p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
|++|+||||+. .||++|+++||++++|.||++..
T Consensus 219 ~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~ 253 (279)
T TIGR01452 219 PARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRL 253 (279)
T ss_pred hhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCH
Confidence 99999999996 99999999999999999999753
No 101
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.62 E-value=4e-15 Score=150.13 Aligned_cols=98 Identities=16% Similarity=0.162 Sum_probs=83.8
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccccccee-------e-----ecccCCCCCHHHHHHH
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF-------F-----DTAVGNKRETPSYVEI 468 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i-------~-----~~~~~~KP~p~~~~~~ 468 (513)
.+++||+.++|+.|++.|++++|+|++.....+.+.+++ ++...+... + ++....||+++.+..+
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~L---gld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~l 256 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKL---RLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRL 256 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHc---CCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHH
Confidence 579999999999999999999999999988888888888 776544321 1 1233468999999999
Q ss_pred HHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEE
Q 010305 469 TNSLGVDKPSEILFVTDVYQEATAAKAAGKELFV 502 (513)
Q Consensus 469 l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 502 (513)
++++|++ +++|++|||+.+|+.+++.||+..++
T Consensus 257 a~~lgi~-~~qtIaVGDg~NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 257 AQEYEIP-LAQTVAIGDGANDLPMIKAAGLGIAY 289 (322)
T ss_pred HHHcCCC-hhhEEEEECCHHHHHHHHHCCCeEEe
Confidence 9999997 99999999999999999999997654
No 102
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.61 E-value=8.3e-15 Score=136.77 Aligned_cols=93 Identities=9% Similarity=0.104 Sum_probs=78.3
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeec----------------------ccCC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT----------------------AVGN 458 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~----------------------~~~~ 458 (513)
.+++||+.++|+.|+++|++++|+||+....++..++++ ++.++|+.++.. ....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI---GEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc---CChhheeEEeccCceECCCCcEEEecCCCCccCcCCCC
Confidence 479999999999999999999999999999999999999 999999988821 1122
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcE
Q 010305 459 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKEL 500 (513)
Q Consensus 459 KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~ 500 (513)
.++++.+..++++. |++|+||||+.+|+++|+++++.+
T Consensus 148 ~~K~~~~~~~~~~~----~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 148 CCKGKVIHKLSEPK----YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred CCHHHHHHHHHhhc----CceEEEECCCcchhchHhcCCccc
Confidence 34677888777664 578999999999999999997643
No 103
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.61 E-value=5.3e-15 Score=129.50 Aligned_cols=98 Identities=28% Similarity=0.355 Sum_probs=88.6
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeee--cccCC----------------CCCHH
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD--TAVGN----------------KRETP 463 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~--~~~~~----------------KP~p~ 463 (513)
.++|++.++|+.|+++|++++|+||+....++..++.+ ++..+|+.++. ..... ||++.
T Consensus 24 ~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 24 ELYPGVKEALKELKEKGIKLALATNKSRREVLELLEEL---GLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHc---CCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 58999999999999999999999999999999999999 88888888872 22222 99999
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEE
Q 010305 464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVI 503 (513)
Q Consensus 464 ~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 503 (513)
.+..++++++.. ++++++|||+.+|+++++++|+.+++|
T Consensus 101 ~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 999999999997 999999999999999999999999875
No 104
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.61 E-value=6.5e-15 Score=149.48 Aligned_cols=98 Identities=15% Similarity=0.100 Sum_probs=85.1
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCc---------------hHHHHHHHHhccCCCCcccccceee-e------cccCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSG---------------SRLAQRLIFGNSNYGDLRKYLSGFF-D------TAVGNK 459 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~---------------~~~~~~~~l~~~~~~gl~~~fd~i~-~------~~~~~K 459 (513)
.+|||+.++|+.|+++|++++|+||+ +......+++.+ ++. |+.++ + +....|
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~---gl~--fd~i~i~~~~~sd~~~~rK 104 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQ---GIK--FDEVLICPHFPEDNCSCRK 104 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHc---CCc--eeeEEEeCCcCcccCCCCC
Confidence 69999999999999999999999996 344566677777 773 66654 2 345789
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEec
Q 010305 460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILD 505 (513)
Q Consensus 460 P~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 505 (513)
|+|+++..++++++++ |++++||||+..|+++|+++||++|+|..
T Consensus 105 P~p~~l~~a~~~l~v~-~~~svmIGDs~sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 105 PKTGLVEEYLAEGAID-LANSYVIGDRETDVQLAENMGIKGIRYAR 149 (354)
T ss_pred CCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence 9999999999999998 99999999999999999999999999964
No 105
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.58 E-value=3e-14 Score=135.20 Aligned_cols=95 Identities=13% Similarity=0.047 Sum_probs=78.4
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--e-c---ccCCCCCHHHHHHHHHHcCC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D-T---AVGNKRETPSYVEITNSLGV 474 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~-~---~~~~KP~p~~~~~~l~~l~~ 474 (513)
..++||+.++|+.|+++ ++++|+||+....++.+++++ ++..+|+..+ + + .+..+|.|.....++++++.
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQL---GWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS 142 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHc---CCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence 46899999999999999 999999999999999999999 8988887544 1 1 11223445555677778888
Q ss_pred CCCCcEEEEecChhhHHHHHHcCCcE
Q 010305 475 DKPSEILFVTDVYQEATAAKAAGKEL 500 (513)
Q Consensus 475 ~~p~~~l~VGDs~~Di~aA~~aG~~~ 500 (513)
. +++|+||||+.+|+++++++|+..
T Consensus 143 ~-~~~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 143 L-GYRVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred h-CCeEEEEeCCHHHHHHHHhCCCCE
Confidence 6 899999999999999999999854
No 106
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.57 E-value=1.1e-14 Score=127.72 Aligned_cols=87 Identities=18% Similarity=0.221 Sum_probs=76.9
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCc-hHHHHHHHHhccCCCC-------cccccceeeecccCCCCCHHHHHHHHHHcC-
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSG-SRLAQRLIFGNSNYGD-------LRKYLSGFFDTAVGNKRETPSYVEITNSLG- 473 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~-~~~~~~~~l~~~~~~g-------l~~~fd~i~~~~~~~KP~p~~~~~~l~~l~- 473 (513)
+|||+.++|+.|+++|++++|+||+ +.......++.. + +.++|+.++.. ..||+|++|+.+++++|
T Consensus 30 ~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~---~~~~~i~~l~~~f~~~~~~--~~~pkp~~~~~a~~~lg~ 104 (128)
T TIGR01681 30 TIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIF---EDFGIIFPLAEYFDPLTIG--YWLPKSPRLVEIALKLNG 104 (128)
T ss_pred HHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhc---cccccchhhHhhhhhhhhc--CCCcHHHHHHHHHHHhcC
Confidence 8899999999999999999999999 888888888888 7 78888887732 24689999999999999
Q ss_pred -CCCCCcEEEEecChhhHHHHHH
Q 010305 474 -VDKPSEILFVTDVYQEATAAKA 495 (513)
Q Consensus 474 -~~~p~~~l~VGDs~~Di~aA~~ 495 (513)
+. |++|+||||+..|++..++
T Consensus 105 ~~~-p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 105 VLK-PKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred CCC-cceEEEECCCHhHHHHHHh
Confidence 97 9999999999999887654
No 107
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.56 E-value=1e-14 Score=143.51 Aligned_cols=102 Identities=15% Similarity=0.172 Sum_probs=88.2
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecc---cCCCCCHHHHHHHHHHcCCCCC
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTA---VGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~---~~~KP~p~~~~~~l~~l~~~~p 477 (513)
.|+++.++++.|++.+++++|+||++........... ++..+|+.+. ... ...||+|++|..++++++++ |
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~---g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~-~ 196 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLAL---DVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCE-P 196 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCC---CchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCC-h
Confidence 4788999999999999999999999887766666666 7888887766 222 23699999999999999998 9
Q ss_pred CcEEEEecCh-hhHHHHHHcCCcEEEEecCCC
Q 010305 478 SEILFVTDVY-QEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 478 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~G~~ 508 (513)
++|+||||+. +|+.+|+++|+++++|.||..
T Consensus 197 ~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~ 228 (257)
T TIGR01458 197 EEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKY 228 (257)
T ss_pred hhEEEECCCcHHHHHHHHHcCCeEEEECCCCC
Confidence 9999999997 899999999999999999964
No 108
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.56 E-value=4.7e-15 Score=134.44 Aligned_cols=86 Identities=12% Similarity=0.179 Sum_probs=78.3
Q ss_pred HHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhh
Q 010305 410 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 489 (513)
Q Consensus 410 ~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~D 489 (513)
+|++|+++|++++|+||++...+...++++ ++..+|+. .||+|+.+..++++++++ |++|+||||+.+|
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~---gi~~~~~~-------~~~k~~~~~~~~~~~~~~-~~~~~~vGDs~~D 104 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTL---GITHLYQG-------QSNKLIAFSDILEKLALA-PENVAYIGDDLID 104 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHc---CCCEEEec-------ccchHHHHHHHHHHcCCC-HHHEEEECCCHHH
Confidence 899999999999999999999999999999 88777653 378999999999999998 9999999999999
Q ss_pred HHHHHHcCCcEEEEecCC
Q 010305 490 ATAAKAAGKELFVILDGW 507 (513)
Q Consensus 490 i~aA~~aG~~~i~v~~G~ 507 (513)
+++++++|+. +++.++.
T Consensus 105 ~~~~~~ag~~-~~v~~~~ 121 (154)
T TIGR01670 105 WPVMEKVGLS-VAVADAH 121 (154)
T ss_pred HHHHHHCCCe-EecCCcC
Confidence 9999999997 7776664
No 109
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.55 E-value=2.5e-14 Score=126.31 Aligned_cols=89 Identities=13% Similarity=0.162 Sum_probs=79.7
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 010305 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 484 (513)
Q Consensus 405 pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VG 484 (513)
|.+++.+..++++|+++.|+||++...+....+++ ++. ++ ....||.+..|.+++++++++ |++|+|||
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l---~v~----fi---~~A~KP~~~~fr~Al~~m~l~-~~~vvmVG 117 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL---GVP----FI---YRAKKPFGRAFRRALKEMNLP-PEEVVMVG 117 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc---CCc----ee---ecccCccHHHHHHHHHHcCCC-hhHEEEEc
Confidence 56677788889999999999999999999999988 653 33 235899999999999999997 99999999
Q ss_pred cCh-hhHHHHHHcCCcEEEEe
Q 010305 485 DVY-QEATAAKAAGKELFVIL 504 (513)
Q Consensus 485 Ds~-~Di~aA~~aG~~~i~v~ 504 (513)
|.. +||.+|+.+||.||.|.
T Consensus 118 DqL~TDVlggnr~G~~tIlV~ 138 (175)
T COG2179 118 DQLFTDVLGGNRAGMRTILVE 138 (175)
T ss_pred chhhhhhhcccccCcEEEEEE
Confidence 999 89999999999999986
No 110
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.55 E-value=6.1e-14 Score=134.27 Aligned_cols=94 Identities=13% Similarity=0.091 Sum_probs=77.4
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccccc---ceee--ecccCCCCCHHHH----------
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL---SGFF--DTAVGNKRETPSY---------- 465 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~f---d~i~--~~~~~~KP~p~~~---------- 465 (513)
..++||+.++|+.|+++|++++|+|++....++.+++.+ +...+| +.++ +.....||+|..+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~---~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K 145 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGI---VEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCK 145 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhh---CCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCH
Confidence 479999999999999999999999999999999999877 443333 2333 2234567887775
Q ss_pred HHHHHHcCCCCCCcEEEEecChhhHHHHHHcCC
Q 010305 466 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGK 498 (513)
Q Consensus 466 ~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~ 498 (513)
..++++++.. +++|+||||+.+|+.+|++||+
T Consensus 146 ~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 146 PSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCe
Confidence 4788888887 9999999999999999999998
No 111
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.51 E-value=2e-13 Score=129.90 Aligned_cols=89 Identities=26% Similarity=0.335 Sum_probs=79.0
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee-ecccCCCCCHHHHHHHHHHcCCCCCCc
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSE 479 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~l~~l~~~~p~~ 479 (513)
.+++|++.++|+.|+++|++++++|+.+...+..+.+.+ |+. +.++ .... .||+|.+|..++++++++ +++
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l---gi~---~~~v~a~~~-~kP~~k~~~~~i~~l~~~-~~~ 197 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL---GIF---DSIVFARVI-GKPEPKIFLRIIKELQVK-PGE 197 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT---TSC---SEEEEESHE-TTTHHHHHHHHHHHHTCT-GGG
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccccccccccccc---ccc---ccccccccc-ccccchhHHHHHHHHhcC-CCE
Confidence 378999999999999999999999999999999999999 883 3222 2211 799999999999999997 999
Q ss_pred EEEEecChhhHHHHHHcC
Q 010305 480 ILFVTDVYQEATAAKAAG 497 (513)
Q Consensus 480 ~l~VGDs~~Di~aA~~aG 497 (513)
|+||||+.+|+.++++||
T Consensus 198 v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 198 VAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEEESSGGHHHHHHHSS
T ss_pred EEEEccCHHHHHHHHhCc
Confidence 999999999999999997
No 112
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.49 E-value=3.9e-14 Score=129.77 Aligned_cols=82 Identities=20% Similarity=0.286 Sum_probs=74.8
Q ss_pred HHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhh
Q 010305 410 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 489 (513)
Q Consensus 410 ~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~D 489 (513)
.++.|+++|++++|+||++...++..++++ ++..+|+. .||+|+.|..++++++++ |++|+||||+.+|
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~l---gi~~~f~~-------~kpkp~~~~~~~~~l~~~-~~ev~~iGD~~nD 110 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRAEEL---KIKRFHEG-------IKKKTEPYAQMLEEMNIS-DAEVCYVGDDLVD 110 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHHHHC---CCcEEEec-------CCCCHHHHHHHHHHcCcC-HHHEEEECCCHHH
Confidence 567788899999999999999999999999 99887764 389999999999999998 9999999999999
Q ss_pred HHHHHHcCCcEEE
Q 010305 490 ATAAKAAGKELFV 502 (513)
Q Consensus 490 i~aA~~aG~~~i~ 502 (513)
+.+++.+|+..+.
T Consensus 111 i~~~~~ag~~~am 123 (169)
T TIGR02726 111 LSMMKRVGLAVAV 123 (169)
T ss_pred HHHHHHCCCeEEC
Confidence 9999999988653
No 113
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.48 E-value=9.7e-14 Score=139.80 Aligned_cols=102 Identities=14% Similarity=0.086 Sum_probs=93.5
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccc-ccceee--e-------cccCCCCCHHHHHHHHHH
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFF--D-------TAVGNKRETPSYVEITNS 471 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~-~fd~i~--~-------~~~~~KP~p~~~~~~l~~ 471 (513)
.++||+.++|+.|+++|++++++||++....+..++++ ++.+ +|+.++ + +....||+|+++..++++
T Consensus 187 ~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l---~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 187 KPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL---RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred CCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH---HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence 68999999999999999999999999999999999999 8886 899887 3 234679999999999999
Q ss_pred cCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecC
Q 010305 472 LGVDKPSEILFVTDVYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 472 l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G 506 (513)
++.++|++|+||||+.+|+++|+++||.+++|.||
T Consensus 264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 264 KIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred HhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 98832799999999999999999999999999998
No 114
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.47 E-value=1.6e-12 Score=123.05 Aligned_cols=98 Identities=7% Similarity=0.108 Sum_probs=82.7
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccce-ee--ec----------ccCCCCCHHHHHH
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG-FF--DT----------AVGNKRETPSYVE 467 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~-i~--~~----------~~~~KP~p~~~~~ 467 (513)
..++|++.++|+.++++|++++|+|+++...++.+++++ ++..+|.. +. ++ ....++++..+..
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~l---g~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~ 162 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARIL---GIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAE 162 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHc---CCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHH
Confidence 368999999999999999999999999999999999999 88777654 21 11 1223566777889
Q ss_pred HHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEE
Q 010305 468 ITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFV 502 (513)
Q Consensus 468 ~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 502 (513)
++++.+++ +++|++||||.+|+..++.+|..++.
T Consensus 163 ~~~~~~~~-~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 163 LLAEEQID-LKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred HHHHcCCC-HHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 99999997 99999999999999999999987653
No 115
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.45 E-value=1.2e-12 Score=120.95 Aligned_cols=92 Identities=13% Similarity=0.094 Sum_probs=76.1
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--e-c-----------ccCCCCCHHHHH
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D-T-----------AVGNKRETPSYV 466 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~-~-----------~~~~KP~p~~~~ 466 (513)
..++||+.++|+.|+++|++++|+|++....++.+++++ ++..+|...+ + + ......++..+.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~---g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKL---GIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc---CCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence 358999999999999999999999999999999999999 8877665443 1 1 112234567888
Q ss_pred HHHHHcCCCCCCcEEEEecChhhHHHHHHc
Q 010305 467 EITNSLGVDKPSEILFVTDVYQEATAAKAA 496 (513)
Q Consensus 467 ~~l~~l~~~~p~~~l~VGDs~~Di~aA~~a 496 (513)
.++++++++ +++|++|||+.+|+.+++.|
T Consensus 149 ~~~~~~~~~-~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 149 ELLEESKIT-LKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHhCCC-HHHEEEEeCCHHHHHHHhcC
Confidence 888999997 99999999999999998764
No 116
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.44 E-value=2.2e-13 Score=127.10 Aligned_cols=84 Identities=10% Similarity=0.193 Sum_probs=74.2
Q ss_pred HHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChh
Q 010305 409 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ 488 (513)
Q Consensus 409 ~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~ 488 (513)
..++.|+++|++++|+||.+...+..+++.+ ++..+|+ ..+++++.+..+++++|++ |++|+||||+.+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l---gl~~~f~-------g~~~k~~~l~~~~~~~gl~-~~ev~~VGDs~~ 123 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTL---GITHLYQ-------GQSNKLIAFSDLLEKLAIA-PEQVAYIGDDLI 123 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc---CCceeec-------CCCcHHHHHHHHHHHhCCC-HHHEEEECCCHH
Confidence 3677788899999999999999999999999 8877665 2467789999999999998 999999999999
Q ss_pred hHHHHHHcCCcEEEEe
Q 010305 489 EATAAKAAGKELFVIL 504 (513)
Q Consensus 489 Di~aA~~aG~~~i~v~ 504 (513)
|+.+++++|+.+ .+.
T Consensus 124 D~~~a~~aG~~~-~v~ 138 (183)
T PRK09484 124 DWPVMEKVGLSV-AVA 138 (183)
T ss_pred HHHHHHHCCCeE-ecC
Confidence 999999999984 454
No 117
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.42 E-value=1.2e-12 Score=128.21 Aligned_cols=53 Identities=23% Similarity=0.307 Sum_probs=49.4
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEEecCh-hhHHHHHHcCCcEEEEecCCCCc
Q 010305 457 GNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 457 ~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
..||+|.+|..++++++++ |++|+||||+. +||.+|+++|+++++|.||++..
T Consensus 176 ~gKP~~~~~~~~~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~ 229 (249)
T TIGR01457 176 IGKPNAIIMEKAVEHLGTE-REETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKA 229 (249)
T ss_pred cCCChHHHHHHHHHHcCCC-cccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCH
Confidence 3499999999999999998 99999999997 89999999999999999998653
No 118
>KOG3699 consensus Cytoskeletal protein Adducin [Signal transduction mechanisms; Cytoskeleton]
Probab=99.41 E-value=3e-13 Score=140.26 Aligned_cols=150 Identities=15% Similarity=0.147 Sum_probs=112.1
Q ss_pred CCCCCCCCCCEEEEeCCCCeecCCCCCCCCCCCCCCCCchHHHHHHHHhc-CccEEEecCChHHHHHHhhcCCCcccccc
Q 010305 77 VQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRIT 155 (513)
Q Consensus 77 ~~~~~l~~~div~vd~~g~~~~g~~~~p~~~~p~~~S~E~~lH~~iy~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~ 155 (513)
..+.+++.+.++.|++.|++++-...+-. -..+.+.+|.+||..| |++||||.|++...|.+.+.+.. +|++
T Consensus 87 ~~~he~tas~l~kv~~~g~iv~qgs~~~~-----vn~sgf~lhsai~~a~p~vrc~ihi~t~~~aavs~mk~gl--lp~s 159 (598)
T KOG3699|consen 87 LLYHEITASSLVKVNIQGEIVDQGSTNLG-----VNQSGFFLHSAIYAARPDVRCIIHIHTSAVAAVSSMKCGL--LPLS 159 (598)
T ss_pred hhhhhcccccceeecccchhhhccccccc-----ccccccchhhhhhccCCceeEEEEeccchHHHHHHhhhcc--cccc
Confidence 77889999999999999999974322221 1146699999999999 99999999999999999987753 4444
Q ss_pred hHHHHhhhcCCcccccceeeeecCCCCch--HHHHHHHHHHhhCCCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHH
Q 010305 156 HMEMIKGIKGHGYYDELVVPIIENTAYEN--ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDA 233 (513)
Q Consensus 156 ~~~~~~~~~g~~~~~~~~vpv~~~~~~~~--~la~~v~~~l~~~~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~ 233 (513)
+-.+. ++ .|.+++|.+... +--..+...++. .++++|+|||++++|++++|||+.+..+.-+|++
T Consensus 160 ~~a~~--lg--------~~~~~dy~~~~e~~~~~~~~~~~lg~---~kvl~lrN~g~~~~g~t~eeA~~~~~~~~~ace~ 226 (598)
T KOG3699|consen 160 QEALV--LG--------EVAYYDYQGILEDEEERIPLQKNLGP---KKVLVLRNHGVVSVGETVEEAFYYIFNLVLACEI 226 (598)
T ss_pred ccccc--cc--------ceeeeecccccccchhhhhHHhhcCc---cceEEEecccccccchhHHHHHHHhhcchhhhhh
Confidence 43222 22 366777755222 222334444553 4999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCC
Q 010305 234 AIKLHQLGLDWST 246 (513)
Q Consensus 234 ~~~a~~~g~~~~~ 246 (513)
++.+.+-|.....
T Consensus 227 qv~~~a~g~dnl~ 239 (598)
T KOG3699|consen 227 QVSASAGGLDNLI 239 (598)
T ss_pred hhhhcccCccccc
Confidence 9996555544333
No 119
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.39 E-value=1.5e-12 Score=138.51 Aligned_cols=91 Identities=21% Similarity=0.355 Sum_probs=78.5
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchH------------HHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHH
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSR------------LAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI 468 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~------------~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~ 468 (513)
+|||+.+.|+.|++.||+++|+||++. ..+..+++.+ ++. |+.++ +...+.||+|.++..+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~l---gip--fdviia~~~~~~RKP~pGm~~~a 272 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKL---GVP--FQVFIAIGAGFYRKPLTGMWDHL 272 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHc---CCc--eEEEEeCCCCCCCCCCHHHHHHH
Confidence 789999999999999999999999987 3567788888 764 78776 4466789999999999
Q ss_pred HHHcC----CCCCCcEEEEecChhhHHHHHHcCCc
Q 010305 469 TNSLG----VDKPSEILFVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 469 l~~l~----~~~p~~~l~VGDs~~Di~aA~~aG~~ 499 (513)
+++++ ++ +++|+||||+..|+++|+++|-+
T Consensus 273 ~~~~~~~~~Id-~~~S~~VGDaagr~~~g~~ag~~ 306 (526)
T TIGR01663 273 KEEANDGTEIQ-EDDCFFVGDAAGRPANGKAAGKK 306 (526)
T ss_pred HHhcCcccCCC-HHHeEEeCCcccchHHHHhcCCC
Confidence 99995 87 99999999999998887777753
No 120
>PLN02645 phosphoglycolate phosphatase
Probab=99.38 E-value=1.8e-12 Score=131.10 Aligned_cols=98 Identities=15% Similarity=0.126 Sum_probs=76.2
Q ss_pred HHHHHHHHH-CCCeEEEEeCchHHH-HHHHHhccCCCCcccccceee--ecc---cCCCCCHHHHHHHHHHcCCCCCCcE
Q 010305 408 PEALEKWHS-LGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFF--DTA---VGNKRETPSYVEITNSLGVDKPSEI 480 (513)
Q Consensus 408 ~~~L~~L~~-~G~~l~i~Tn~~~~~-~~~~l~~~~~~gl~~~fd~i~--~~~---~~~KP~p~~~~~~l~~l~~~~p~~~ 480 (513)
......|+. .| .++|+||.+... ....+... +...+|+.+. ... ...||+|.+|..++++++++ +++|
T Consensus 176 ~~a~~~l~~~~g-~~~i~tn~d~~~~~~~~~~~~---g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~-~~~~ 250 (311)
T PLN02645 176 QYATLCIRENPG-CLFIATNRDAVTHLTDAQEWA---GAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIE-KSQI 250 (311)
T ss_pred HHHHHHHhcCCC-CEEEEeCCCCCCCCCCCCCcc---chHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCC-cccE
Confidence 344556654 34 588999998743 22333444 6777788777 221 23599999999999999998 9999
Q ss_pred EEEecCh-hhHHHHHHcCCcEEEEecCCCCc
Q 010305 481 LFVTDVY-QEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 481 l~VGDs~-~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
+||||++ +||++|+++|+++++|.||+++.
T Consensus 251 ~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~ 281 (311)
T PLN02645 251 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSE 281 (311)
T ss_pred EEEcCCcHHHHHHHHHcCCCEEEEcCCCCCH
Confidence 9999998 99999999999999999999763
No 121
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.38 E-value=2.3e-12 Score=130.88 Aligned_cols=91 Identities=13% Similarity=0.110 Sum_probs=83.3
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhc----cCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN----SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~----~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
.+|||+.++|+.|+++|++++|+||++...+..++++ + ++.++|+.+... .||+|+.+..+++++|+. |
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~---~~~~~f~~~~~~---~~pk~~~i~~~~~~l~i~-~ 103 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFI---LQAEDFDARSIN---WGPKSESLRKIAKKLNLG-T 103 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCcccc---CcHHHeeEEEEe---cCchHHHHHHHHHHhCCC-c
Confidence 3689999999999999999999999999999999998 7 888889887532 689999999999999998 9
Q ss_pred CcEEEEecChhhHHHHHHcCCc
Q 010305 478 SEILFVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~ 499 (513)
++++||||++.|+.++++++-.
T Consensus 104 ~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 104 DSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred CcEEEECCCHHHHHHHHHHCCC
Confidence 9999999999999999997754
No 122
>PRK10444 UMP phosphatase; Provisional
Probab=99.38 E-value=1.7e-12 Score=126.84 Aligned_cols=55 Identities=20% Similarity=0.160 Sum_probs=50.7
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCcEEEEecCh-hhHHHHHHcCCcEEEEecCCCCc
Q 010305 455 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 455 ~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
....||+|++|..++++++++ |++|+||||+. +|+.+|+++|+++++|.||++..
T Consensus 170 ~~~gKP~~~~~~~~~~~~~~~-~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~ 225 (248)
T PRK10444 170 FYVGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETILVLSGVSTL 225 (248)
T ss_pred cccCCCCHHHHHHHHHHcCCC-cccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCH
Confidence 335799999999999999998 99999999997 89999999999999999998753
No 123
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.36 E-value=1.4e-11 Score=116.64 Aligned_cols=95 Identities=15% Similarity=0.080 Sum_probs=76.8
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccccccee--eec-------ccCCCCCHHHHHHHHHH
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF--FDT-------AVGNKRETPSYVEITNS 471 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i--~~~-------~~~~KP~p~~~~~~l~~ 471 (513)
.+++||+.++|+.|++.+ +++|+|++....+..+++.+ |+..+|..- +++ ....||.+..+...+++
T Consensus 67 i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~l---gi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~ 142 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQL---GFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKS 142 (203)
T ss_pred CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHc---CCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHh
Confidence 469999999999999985 99999999999999999999 998888632 221 11346667776766665
Q ss_pred cCCCCCCcEEEEecChhhHHHHHHcCCcEEEE
Q 010305 472 LGVDKPSEILFVTDVYQEATAAKAAGKELFVI 503 (513)
Q Consensus 472 l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 503 (513)
.+ .+|++|||+.+|+.+++.+|+..+..
T Consensus 143 ~~----~~~v~vGDs~nDl~ml~~Ag~~ia~~ 170 (203)
T TIGR02137 143 LY----YRVIAAGDSYNDTTMLSEAHAGILFH 170 (203)
T ss_pred hC----CCEEEEeCCHHHHHHHHhCCCCEEec
Confidence 44 37999999999999999999987653
No 124
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.34 E-value=1.4e-12 Score=117.36 Aligned_cols=92 Identities=18% Similarity=0.149 Sum_probs=82.0
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccc-ccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~-~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
..++||+.++|+.|+ ++++++|+||++...++.+++++ ++.. +|+.++ ++....||+ |++++++++.+ |
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l---~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~-p 115 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLL---DPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRD-L 115 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHh---CcCCCEeeeEEECccccccCCe---EeecHHHcCCC-h
Confidence 368999999999999 57999999999999999999999 8854 458877 556677886 99999999997 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcE
Q 010305 478 SEILFVTDVYQEATAAKAAGKEL 500 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~ 500 (513)
++|+||||+..|+++|+++|+..
T Consensus 116 ~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 116 SNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred hcEEEEECCHHHhhcCccCEEEe
Confidence 99999999999999999999874
No 125
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.33 E-value=5.6e-12 Score=123.02 Aligned_cols=53 Identities=32% Similarity=0.433 Sum_probs=49.6
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEEecCh-hhHHHHHHcCCcEEEEecCCCCc
Q 010305 457 GNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 457 ~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
..||+|.+|..++++++.. +++|+||||+. +||.+|+++||.+++|.+|.+..
T Consensus 188 ~GKP~~~i~~~al~~~~~~-~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~ 241 (269)
T COG0647 188 IGKPSPAIYEAALEKLGLD-RSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSA 241 (269)
T ss_pred cCCCCHHHHHHHHHHhCCC-cccEEEEcCCchhhHHHHHHcCCCEEEEccCCCCh
Confidence 3499999999999999997 99999999999 89999999999999999998743
No 126
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.32 E-value=1.2e-11 Score=113.05 Aligned_cols=102 Identities=21% Similarity=0.227 Sum_probs=85.1
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCch---------------HHHHHHHHhccCCCCcccccceee-------ecccCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGS---------------RLAQRLIFGNSNYGDLRKYLSGFF-------DTAVGNK 459 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~---------------~~~~~~~l~~~~~~gl~~~fd~i~-------~~~~~~K 459 (513)
.+.||+.+.|..|++.||+++|+||++ .......++.. |. .||.++ +.+.++|
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~---gv--~id~i~~Cph~p~~~c~cRK 105 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQ---GV--KIDGILYCPHHPEDNCDCRK 105 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHc---CC--ccceEEECCCCCCCCCcccC
Confidence 588999999999999999999999976 22233444444 43 467766 2367899
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCCCC
Q 010305 460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 460 P~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
|+|.+++.++++++++ +++.+||||+..|+++|.++|++.+.+..|...
T Consensus 106 P~~gm~~~~~~~~~iD-~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~ 154 (181)
T COG0241 106 PKPGMLLSALKEYNID-LSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGV 154 (181)
T ss_pred CChHHHHHHHHHhCCC-ccceEEecCcHHHHHHHHHCCCCceEEEcCccc
Confidence 9999999999999998 999999999999999999999999888876543
No 127
>PTZ00445 p36-lilke protein; Provisional
Probab=99.25 E-value=2.9e-11 Score=111.97 Aligned_cols=98 Identities=14% Similarity=0.171 Sum_probs=78.7
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHH---------------HHHHHHhccCCCCcccccceee-------ec------
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRL---------------AQRLIFGNSNYGDLRKYLSGFF-------DT------ 454 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~---------------~~~~~l~~~~~~gl~~~fd~i~-------~~------ 454 (513)
+-|....+++.|++.|++++|+|-++.. .++..++.. +-.-....++ ++
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s---~~~~~i~~~~~yyp~~w~~p~~y~~ 152 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKS---KCDFKIKKVYAYYPKFWQEPSDYRP 152 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhc---CccceeeeeeeeCCcccCChhhhhh
Confidence 5678889999999999999999988763 466666643 2222222222 11
Q ss_pred ccCCCCCHHH--H--HHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEe
Q 010305 455 AVGNKRETPS--Y--VEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVIL 504 (513)
Q Consensus 455 ~~~~KP~p~~--~--~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~ 504 (513)
.+-.||+|++ | +++++++|+. |++|+||+|+..++++|++.|+.++.+.
T Consensus 153 ~gl~KPdp~iK~yHle~ll~~~gl~-peE~LFIDD~~~NVeaA~~lGi~ai~f~ 205 (219)
T PTZ00445 153 LGLDAPMPLDKSYHLKQVCSDFNVN-PDEILFIDDDMNNCKNALKEGYIALHVT 205 (219)
T ss_pred hcccCCCccchHHHHHHHHHHcCCC-HHHeEeecCCHHHHHHHHHCCCEEEEcC
Confidence 3556999999 9 9999999998 9999999999999999999999999998
No 128
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.24 E-value=2.5e-10 Score=108.69 Aligned_cols=97 Identities=18% Similarity=0.184 Sum_probs=83.4
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ec----------ccCCCCCHHHHHHH
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DT----------AVGNKRETPSYVEI 468 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~----------~~~~KP~p~~~~~~ 468 (513)
..++||+.++++.++++|++++|+|.+....++.+.+.+ |+...+...+ ++ ....+-+.......
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~l---g~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~ 152 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERL---GIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALREL 152 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHh---CCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHH
Confidence 579999999999999999999999999999999999999 8887776655 22 11123466778899
Q ss_pred HHHcCCCCCCcEEEEecChhhHHHHHHcCCcEE
Q 010305 469 TNSLGVDKPSEILFVTDVYQEATAAKAAGKELF 501 (513)
Q Consensus 469 l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i 501 (513)
++++|++ +++++++||+.+|+..-..+|...+
T Consensus 153 ~~~~g~~-~~~~~a~gDs~nDlpml~~ag~~ia 184 (212)
T COG0560 153 AAELGIP-LEETVAYGDSANDLPMLEAAGLPIA 184 (212)
T ss_pred HHHcCCC-HHHeEEEcCchhhHHHHHhCCCCeE
Confidence 9999997 9999999999999999999998754
No 129
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.19 E-value=6.9e-11 Score=107.65 Aligned_cols=101 Identities=20% Similarity=0.282 Sum_probs=73.9
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeC-chHHHHHHHHhccCCCCcc----------cccceeeecccCCCCCHHHHHHHH
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSS-GSRLAQRLIFGNSNYGDLR----------KYLSGFFDTAVGNKRETPSYVEIT 469 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn-~~~~~~~~~l~~~~~~gl~----------~~fd~i~~~~~~~KP~p~~~~~~l 469 (513)
..+||++.++|+.|+++|++++++|- ...+.++.+|+.+ ++. ++|+..- . ++-.+...|..+.
T Consensus 44 v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l---~i~~~~~~~~~~~~~F~~~e-I--~~gsK~~Hf~~i~ 117 (169)
T PF12689_consen 44 VSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLL---EIDDADGDGVPLIEYFDYLE-I--YPGSKTTHFRRIH 117 (169)
T ss_dssp E---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHT---T-C----------CCECEEE-E--SSS-HHHHHHHHH
T ss_pred EEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhc---CCCccccccccchhhcchhh-e--ecCchHHHHHHHH
Confidence 46999999999999999999999994 4567889999999 888 7777732 1 2226789999999
Q ss_pred HHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 470 NSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 470 ~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
++.|++ .++++|++|...+++...+.|+.++.|-.|-+
T Consensus 118 ~~tgI~-y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt 155 (169)
T PF12689_consen 118 RKTGIP-YEEMLFFDDESRNIEVVSKLGVTCVLVPDGLT 155 (169)
T ss_dssp HHH----GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--
T ss_pred HhcCCC-hhHEEEecCchhcceeeEecCcEEEEeCCCCC
Confidence 999997 99999999999999999999999999998864
No 130
>PRK08238 hypothetical protein; Validated
Probab=99.18 E-value=3.3e-10 Score=120.28 Aligned_cols=93 Identities=14% Similarity=0.199 Sum_probs=77.0
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCCCc
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE 479 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p~~ 479 (513)
+++||+.++|++++++|++++|+||+++..++.+++++ |+ ||.++ ++....||+++. ..+.+.++ .++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~l---Gl---Fd~Vigsd~~~~~kg~~K~-~~l~~~l~---~~~ 141 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHL---GL---FDGVFASDGTTNLKGAAKA-AALVEAFG---ERG 141 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---CC---CCEEEeCCCccccCCchHH-HHHHHHhC---ccC
Confidence 57899999999999999999999999999999999999 77 88888 445566776653 33445554 457
Q ss_pred EEEEecChhhHHHHHHcCCcEEEEec
Q 010305 480 ILFVTDVYQEATAAKAAGKELFVILD 505 (513)
Q Consensus 480 ~l~VGDs~~Di~aA~~aG~~~i~v~~ 505 (513)
++|+||+.+|+.+++.+| +.+.|.-
T Consensus 142 ~~yvGDS~~Dlp~~~~A~-~av~Vn~ 166 (479)
T PRK08238 142 FDYAGNSAADLPVWAAAR-RAIVVGA 166 (479)
T ss_pred eeEecCCHHHHHHHHhCC-CeEEECC
Confidence 999999999999999999 7777763
No 131
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=99.17 E-value=5.8e-11 Score=107.94 Aligned_cols=93 Identities=19% Similarity=0.226 Sum_probs=67.6
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCch---H-----------HHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHH
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGS---R-----------LAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYV 466 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~---~-----------~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~ 466 (513)
++|++.+.|++|++.||+++|+||+. . ..+..+++.+ ++. +..++ ....++||.|.|+.
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l---~ip--~~~~~a~~~d~~RKP~~GM~~ 104 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKEL---GIP--IQVYAAPHKDPCRKPNPGMWE 104 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHC---TS---EEEEECGCSSTTSTTSSHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHc---CCc--eEEEecCCCCCCCCCchhHHH
Confidence 45689999999999999999999983 1 2344555555 444 22222 33578999999999
Q ss_pred HHHHHcCC----CCCCcEEEEecC-----------hhhHHHHHHcCCcEE
Q 010305 467 EITNSLGV----DKPSEILFVTDV-----------YQEATAAKAAGKELF 501 (513)
Q Consensus 467 ~~l~~l~~----~~p~~~l~VGDs-----------~~Di~aA~~aG~~~i 501 (513)
.++++++. + .++++||||+ -.|.+-|.++|++..
T Consensus 105 ~~~~~~~~~~~id-~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 105 FALKDYNDGVEID-LANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp HHCCCTSTT--S--CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred HHHHhcccccccc-ccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 99999975 6 8999999996 589999999999854
No 132
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.16 E-value=2.6e-11 Score=118.36 Aligned_cols=98 Identities=12% Similarity=0.096 Sum_probs=82.3
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccccccee--e--ecccCCCCCHHHHHHHHHHcCCCCCCc
Q 010305 404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF--F--DTAVGNKRETPSYVEITNSLGVDKPSE 479 (513)
Q Consensus 404 ~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i--~--~~~~~~KP~p~~~~~~l~~l~~~~p~~ 479 (513)
||++.++++.|+++|+++ |+||++.......+... +...+|..+ . +.....||+|.+|..++++++..++++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~---~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~ 215 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRY---GAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNR 215 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEe---cccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCccc
Confidence 789999999999999997 88999988776666666 666666654 2 334578999999999999998753679
Q ss_pred EEEEecCh-hhHHHHHHcCCcEEEEec
Q 010305 480 ILFVTDVY-QEATAAKAAGKELFVILD 505 (513)
Q Consensus 480 ~l~VGDs~-~Di~aA~~aG~~~i~v~~ 505 (513)
|+||||+. +|+.+|+++|+.+++|.+
T Consensus 216 ~~~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 216 MLMVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred EEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence 99999994 999999999999999864
No 133
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.15 E-value=1.2e-09 Score=106.98 Aligned_cols=93 Identities=15% Similarity=0.180 Sum_probs=80.3
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccccccee------e--ecccCCCCCH---------
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF------F--DTAVGNKRET--------- 462 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i------~--~~~~~~KP~p--------- 462 (513)
...+.||+.++++.|+++|++++|+|++....++.+++++ ++.+.+..+ + +....+||.|
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~l---gl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~ 195 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQA---GVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNH 195 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHc---CCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHH
Confidence 4689999999999999999999999999999999999998 887777777 3 2234458888
Q ss_pred HHHHHHHHHcC--CCCCCcEEEEecChhhHHHHHHc
Q 010305 463 PSYVEITNSLG--VDKPSEILFVTDVYQEATAAKAA 496 (513)
Q Consensus 463 ~~~~~~l~~l~--~~~p~~~l~VGDs~~Di~aA~~a 496 (513)
..++.+.+.++ .+ +++|++|||+.+|+.+|...
T Consensus 196 ~v~~~~~~~~~~~~~-~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 196 DVALRNTEYFNQLKD-RSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHHHHhCccCC-cceEEEECcChhhhhHhcCC
Confidence 77888899998 76 99999999999999997665
No 134
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.11 E-value=1.3e-10 Score=91.99 Aligned_cols=53 Identities=32% Similarity=0.400 Sum_probs=50.4
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEEecC-hhhHHHHHHcCCcEEEEecCCCCc
Q 010305 457 GNKRETPSYVEITNSLGVDKPSEILFVTDV-YQEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 457 ~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs-~~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
..||+|.+|..++++++++ |++|+||||+ ..||++|+++|+.+|+|.+|....
T Consensus 2 ~gKP~p~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~ 55 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSP 55 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCC
T ss_pred CCCCcHHHHHHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCH
Confidence 5799999999999999997 9999999999 799999999999999999999765
No 135
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=99.01 E-value=2.9e-09 Score=96.69 Aligned_cols=93 Identities=17% Similarity=0.169 Sum_probs=66.6
Q ss_pred cCCCHHHHHHHHHHCCC--eEEEEeCch-------HHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcC
Q 010305 403 VFDDVPEALEKWHSLGT--KVYIYSSGS-------RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLG 473 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~--~l~i~Tn~~-------~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~ 473 (513)
+.|.+.+.+++|++.+. ++.|+||+. ...++.+.+.+ |+. .+. ....|| ..+..+++.++
T Consensus 60 i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~l---gIp----vl~--h~~kKP--~~~~~i~~~~~ 128 (168)
T PF09419_consen 60 IPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKAL---GIP----VLR--HRAKKP--GCFREILKYFK 128 (168)
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhh---CCc----EEE--eCCCCC--ccHHHHHHHHh
Confidence 33455556666666655 599999983 66677777777 642 111 123566 55666666654
Q ss_pred -----CCCCCcEEEEecCh-hhHHHHHHcCCcEEEEecCC
Q 010305 474 -----VDKPSEILFVTDVY-QEATAAKAAGKELFVILDGW 507 (513)
Q Consensus 474 -----~~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~G~ 507 (513)
.+ |+++++|||.. +||-+|...|+.+|+|+.|-
T Consensus 129 ~~~~~~~-p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 129 CQKVVTS-PSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred hccCCCC-chhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 34 99999999999 89999999999999999873
No 136
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.99 E-value=8.1e-10 Score=107.82 Aligned_cols=89 Identities=10% Similarity=0.094 Sum_probs=72.5
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHH--HHHhccCCCCccc-ccceeeecccCCCCCHHHHHHHHHHcCCCCCCc
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR--LIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 479 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~--~~l~~~~~~gl~~-~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~ 479 (513)
+|||+.++|++|+++|++++++||+++.... ..++++ |+.. +|+.++...... ...+..++++++.. |++
T Consensus 25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~---gl~~~~~~~Ii~s~~~~---~~~l~~~~~~~~~~-~~~ 97 (242)
T TIGR01459 25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL---GINADLPEMIISSGEIA---VQMILESKKRFDIR-NGI 97 (242)
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC---CCCccccceEEccHHHH---HHHHHhhhhhccCC-Cce
Confidence 7899999999999999999999999887655 678888 8987 899988321111 14677778888997 999
Q ss_pred EEEEecChhhHHHHHHcCC
Q 010305 480 ILFVTDVYQEATAAKAAGK 498 (513)
Q Consensus 480 ~l~VGDs~~Di~aA~~aG~ 498 (513)
|++|||+..|++.....|.
T Consensus 98 ~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 98 IYLLGHLENDIINLMQCYT 116 (242)
T ss_pred EEEeCCcccchhhhcCCCc
Confidence 9999999999887766654
No 137
>PRK11590 hypothetical protein; Provisional
Probab=98.96 E-value=4.5e-08 Score=93.48 Aligned_cols=104 Identities=12% Similarity=0.070 Sum_probs=71.0
Q ss_pred HHHHhhcCcccCccCCCHHHHH-HHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee----ecccCCC---C-
Q 010305 390 WRTGFESNELEGEVFDDVPEAL-EKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----DTAVGNK---R- 460 (513)
Q Consensus 390 ~~~~~~~~~~~~~~~pg~~~~L-~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~----~~~~~~K---P- 460 (513)
|++.|... ..+|||+.++| +.|+++|++++|+||++...++.+++.+ ++.. .+.++ +....+| |
T Consensus 86 f~~~~~~~---~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l---~~~~-~~~~i~t~l~~~~tg~~~g~~ 158 (211)
T PRK11590 86 FVRWFRDN---VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDT---PWLP-RVNLIASQMQRRYGGWVLTLR 158 (211)
T ss_pred HHHHHHHh---CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc---cccc-cCceEEEEEEEEEccEECCcc
Confidence 44445332 46799999999 6789999999999999999999999988 6422 22333 1010010 1
Q ss_pred --CHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEE
Q 010305 461 --ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELF 501 (513)
Q Consensus 461 --~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i 501 (513)
-.+=..++.+.++.+ ...+.+-|||.+|+..-.-+|-..+
T Consensus 159 c~g~~K~~~l~~~~~~~-~~~~~aY~Ds~~D~pmL~~a~~~~~ 200 (211)
T PRK11590 159 CLGHEKVAQLERKIGTP-LRLYSGYSDSKQDNPLLYFCQHRWR 200 (211)
T ss_pred CCChHHHHHHHHHhCCC-cceEEEecCCcccHHHHHhCCCCEE
Confidence 122234444455766 7889999999999999988886643
No 138
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.92 E-value=1.1e-08 Score=98.16 Aligned_cols=105 Identities=14% Similarity=0.133 Sum_probs=80.9
Q ss_pred cCccCCCHHHHHHHH--HHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeee------ccc-----------C-CC
Q 010305 400 EGEVFDDVPEALEKW--HSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD------TAV-----------G-NK 459 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L--~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~------~~~-----------~-~K 459 (513)
..++.||+.++++.+ +..|+.++|+|.+...+++.+|++. |+...|+.|+. ..+ . .-
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~---gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C 145 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHH---GLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLC 145 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhC---CCccccceEEeCCceecCCceEEEeCccCCCCCcC
Confidence 458999999999999 4579999999999999999999999 99999988881 110 0 01
Q ss_pred C----CHHHHHHHHHH---cCCCCCCcEEEEecChhhHHHHHHcCCc-EEEEecCCC
Q 010305 460 R----ETPSYVEITNS---LGVDKPSEILFVTDVYQEATAAKAAGKE-LFVILDGWM 508 (513)
Q Consensus 460 P----~p~~~~~~l~~---l~~~~p~~~l~VGDs~~Di~aA~~aG~~-~i~v~~G~~ 508 (513)
| +-..+...++. -|+. -++++||||..+|+-.+++.+-. .+...-||.
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~-~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~ 201 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVP-YDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYP 201 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCC-cceEEEECCCCCCcCcccccCCCCEEecCCCCh
Confidence 2 23455555554 3665 78999999999999999987654 566666663
No 139
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=98.90 E-value=6.5e-09 Score=105.10 Aligned_cols=103 Identities=17% Similarity=0.119 Sum_probs=83.0
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCC-----CCcccccceee-eccc------------------
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY-----GDLRKYLSGFF-DTAV------------------ 456 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~-----~gl~~~fd~i~-~~~~------------------ 456 (513)
...+||+.++|+.|+++|++++|+||++...+..+++.+-. .++.++||.++ +...
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g 262 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETG 262 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCC
Confidence 35799999999999999999999999999999999998521 23899999888 2111
Q ss_pred CCCCCH------------HHHHHHHHHcCCCCCCcEEEEecCh-hhHHHHH-HcCCcEEEEe
Q 010305 457 GNKRET------------PSYVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGKELFVIL 504 (513)
Q Consensus 457 ~~KP~p------------~~~~~~l~~l~~~~p~~~l~VGDs~-~Di~aA~-~aG~~~i~v~ 504 (513)
..|+.. .-.....+.++++ +++++||||+. .||.+|+ .+||+|++|.
T Consensus 263 ~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~-~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~ 323 (343)
T TIGR02244 263 SLKWGEVDGLEPGKVYSGGSLKQFHELLKWR-GKEVLYFGDHIYGDLLRSKKKRGWRTAAII 323 (343)
T ss_pred cccCCccccccCCCeEeCCCHHHHHHHHCCC-CCcEEEECCcchHHHHhhHHhcCcEEEEEc
Confidence 112211 2345577888997 99999999999 8999998 9999999986
No 140
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.86 E-value=1.3e-08 Score=99.80 Aligned_cols=84 Identities=11% Similarity=0.088 Sum_probs=64.2
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchH---HHHHHHHhccCCCCccccc-ceee-ecccCCCCCHHHHHHHHHHcCCC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSR---LAQRLIFGNSNYGDLRKYL-SGFF-DTAVGNKRETPSYVEITNSLGVD 475 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~---~~~~~~l~~~~~~gl~~~f-d~i~-~~~~~~KP~p~~~~~~l~~l~~~ 475 (513)
..++||+.++|+.|+++|++++++||.+. ..+...++.+ |+..++ +.++ ... .++++.-+..+.+.+++
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~---Gi~~~~~d~lllr~~--~~~K~~rr~~I~~~y~I- 190 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRF---GFPQADEEHLLLKKD--KSSKESRRQKVQKDYEI- 190 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHc---CcCCCCcceEEeCCC--CCCcHHHHHHHHhcCCE-
Confidence 46999999999999999999999999874 3455677777 886543 5555 322 35667777777776665
Q ss_pred CCCcEEEEecChhhHHHHH
Q 010305 476 KPSEILFVTDVYQEATAAK 494 (513)
Q Consensus 476 ~p~~~l~VGDs~~Di~aA~ 494 (513)
+++|||+..|+....
T Consensus 191 ----vl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 191 ----VLLFGDNLLDFDDFF 205 (266)
T ss_pred ----EEEECCCHHHhhhhh
Confidence 799999999997643
No 141
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.78 E-value=1.3e-07 Score=88.42 Aligned_cols=85 Identities=14% Similarity=0.133 Sum_probs=60.6
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccccc--ceeeeccc-------CCC----CCHHHHHHH---
Q 010305 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFFDTAV-------GNK----RETPSYVEI--- 468 (513)
Q Consensus 405 pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~f--d~i~~~~~-------~~K----P~p~~~~~~--- 468 (513)
|++.++|+.++++|++++|+|.++...++.+++.+ ++...+ ..-+.+.. ... -+...+..+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~---~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERL---GIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHT---TSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc---CCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 44449999999999999999999999999999988 765422 11111000 000 145555555
Q ss_pred HHHcCCCCCCcEEEEecChhhHHHHH
Q 010305 469 TNSLGVDKPSEILFVTDVYQEATAAK 494 (513)
Q Consensus 469 l~~l~~~~p~~~l~VGDs~~Di~aA~ 494 (513)
... +.. +..+++|||+.+|+.+++
T Consensus 169 ~~~-~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 169 DEE-DID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHH-THT-CCEEEEEESSGGGHHHHH
T ss_pred hhc-CCC-CCeEEEEECCHHHHHHhC
Confidence 344 776 899999999999998875
No 142
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.78 E-value=3.7e-08 Score=97.57 Aligned_cols=99 Identities=11% Similarity=0.060 Sum_probs=67.5
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCch-----HHHHHHHHhccCCCCcccc--cceeeecccCCCCCHHHHHHHHHHcCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGS-----RLAQRLIFGNSNYGDLRKY--LSGFFDTAVGNKRETPSYVEITNSLGV 474 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~-----~~~~~~~l~~~~~~gl~~~--fd~i~~~~~~~KP~p~~~~~~l~~l~~ 474 (513)
..++++.++++.++..+..+.++++.+ ....+.+.+.+ ++.-. ....++.....-.++..+..+++++|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi 213 (272)
T PRK10530 137 PTFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHEL---GLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGW 213 (272)
T ss_pred cceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhc---CceEEEecCceEEEecCCCChHHHHHHHHHHcCC
Confidence 346778888888887777777777754 22334444444 43311 111223333333467789999999999
Q ss_pred CCCCcEEEEecChhhHHHHHHcCCcEEEEecCC
Q 010305 475 DKPSEILFVTDVYQEATAAKAAGKELFVILDGW 507 (513)
Q Consensus 475 ~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~ 507 (513)
+ +++|++|||+.+|+++++.+|+ .|.+|.
T Consensus 214 ~-~~e~i~~GD~~NDi~m~~~ag~---~vamgn 242 (272)
T PRK10530 214 S-MKNVVAFGDNFNDISMLEAAGL---GVAMGN 242 (272)
T ss_pred C-HHHeEEeCCChhhHHHHHhcCc---eEEecC
Confidence 8 9999999999999999999996 444554
No 143
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=98.77 E-value=4.4e-08 Score=89.62 Aligned_cols=50 Identities=24% Similarity=0.339 Sum_probs=47.0
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEEecCh-hhHHHHHHcCCcEEEEecCC
Q 010305 457 GNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGKELFVILDGW 507 (513)
Q Consensus 457 ~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~G~ 507 (513)
..||+|..|+.+++.+|++ |++++||||.. .|+-+|.+.||+.|.|.+|=
T Consensus 179 vGKP~~~fFe~al~~~gv~-p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK 229 (262)
T KOG3040|consen 179 VGKPSPFFFESALQALGVD-PEEAVMIGDDLNDDVGGAQACGMRGILVKTGK 229 (262)
T ss_pred ecCCCHHHHHHHHHhcCCC-hHHheEEccccccchhhHhhhcceeEEeeccc
Confidence 4599999999999999998 99999999999 69999999999999999873
No 144
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.74 E-value=8.6e-09 Score=90.34 Aligned_cols=81 Identities=16% Similarity=0.245 Sum_probs=71.1
Q ss_pred HHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhh
Q 010305 410 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 489 (513)
Q Consensus 410 ~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~D 489 (513)
-|+.|.+.|++++|+|......++...+.+ |+..+|.+ .+-+-..|..+++++++. +++|.||||..+|
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~L---GI~~~~qG-------~~dK~~a~~~L~~~~~l~-~e~~ayiGDD~~D 111 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDL---GIKHLYQG-------ISDKLAAFEELLKKLNLD-PEEVAYVGDDLVD 111 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHc---CCceeeec-------hHhHHHHHHHHHHHhCCC-HHHhhhhcCcccc
Confidence 467778899999999999999999999999 88765554 334678899999999998 9999999999999
Q ss_pred HHHHHHcCCcEE
Q 010305 490 ATAAKAAGKELF 501 (513)
Q Consensus 490 i~aA~~aG~~~i 501 (513)
+..-+++|+.++
T Consensus 112 lpvm~~vGls~a 123 (170)
T COG1778 112 LPVMEKVGLSVA 123 (170)
T ss_pred HHHHHHcCCccc
Confidence 999999999854
No 145
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.71 E-value=3.6e-08 Score=96.48 Aligned_cols=56 Identities=13% Similarity=0.172 Sum_probs=49.2
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHH
Q 010305 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETP 463 (513)
Q Consensus 405 pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~ 463 (513)
||+.++|++|+++|++++|+||++++.+...++.+ |+..+|+.++ ++....||+|+
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~l---GLd~YFdvIIs~Gdv~~~kp~~e 206 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKV---KLDRYFDIIISGGHKAEEYSTMS 206 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHc---CCCcccCEEEECCccccCCCCcc
Confidence 79999999999999999999999999999999999 9999999888 44555566553
No 146
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=98.68 E-value=1.7e-06 Score=82.53 Aligned_cols=96 Identities=10% Similarity=0.087 Sum_probs=66.3
Q ss_pred CccCCCHHHHHH-HHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee----ecccCCC---C---CHHHHHHHH
Q 010305 401 GEVFDDVPEALE-KWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----DTAVGNK---R---ETPSYVEIT 469 (513)
Q Consensus 401 ~~~~pg~~~~L~-~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~----~~~~~~K---P---~p~~~~~~l 469 (513)
..+|||+.++|+ .++++|++++|+||++...++.+.+.. ++..- +.++ +...+.+ | -.+=...+.
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~---~~~~~-~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~ 168 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS---NFIHR-LNLIASQIERGNGGWVLPLRCLGHEKVAQLE 168 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc---ccccc-CcEEEEEeEEeCCceEcCccCCChHHHHHHH
Confidence 368999999996 789999999999999999999988775 33221 2222 1101011 1 122233344
Q ss_pred HHcCCCCCCcEEEEecChhhHHHHHHcCCcEE
Q 010305 470 NSLGVDKPSEILFVTDVYQEATAAKAAGKELF 501 (513)
Q Consensus 470 ~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i 501 (513)
+.++.+ .+.+.+-|||.+|+..-.-+|-..+
T Consensus 169 ~~~~~~-~~~~~aYsDS~~D~pmL~~a~~~~~ 199 (210)
T TIGR01545 169 QKIGSP-LKLYSGYSDSKQDNPLLAFCEHRWR 199 (210)
T ss_pred HHhCCC-hhheEEecCCcccHHHHHhCCCcEE
Confidence 455655 7789999999999999988887643
No 147
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.60 E-value=1.3e-07 Score=103.29 Aligned_cols=91 Identities=18% Similarity=0.209 Sum_probs=75.8
Q ss_pred CccCCCHHHHHHHHHHCC-CeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCc
Q 010305 401 GEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 479 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G-~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~ 479 (513)
..++||+.++|+.|+++| ++++|+||.+...++.+++++ |+.++|..+. +++++ .++++++.. +++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l---gi~~~f~~~~-----p~~K~----~~v~~l~~~-~~~ 449 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL---GIDEVHAELL-----PEDKL----AIVKELQEE-GGV 449 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh---CCCeeeccCC-----HHHHH----HHHHHHHHc-CCE
Confidence 479999999999999999 999999999999999999999 9977666531 12223 355555556 889
Q ss_pred EEEEecChhhHHHHHHcCCcEEEEecCC
Q 010305 480 ILFVTDVYQEATAAKAAGKELFVILDGW 507 (513)
Q Consensus 480 ~l~VGDs~~Di~aA~~aG~~~i~v~~G~ 507 (513)
|+||||+.+|+.++++|| +++.||.
T Consensus 450 v~~vGDg~nD~~al~~A~---vgia~g~ 474 (556)
T TIGR01525 450 VAMVGDGINDAPALAAAD---VGIAMGA 474 (556)
T ss_pred EEEEECChhHHHHHhhCC---EeEEeCC
Confidence 999999999999999999 7888884
No 148
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.57 E-value=3.5e-08 Score=90.15 Aligned_cols=96 Identities=14% Similarity=0.094 Sum_probs=81.9
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccc-ccceee--ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~-~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
....||+.++|+.|.+. +.++|+|++++.+++.+++++ +... +|+.++ ++....+|. |.+.++.+|.+ +
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~l---dp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~-~ 112 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDIL---DRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKD-L 112 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHH---CcCCCEEeEEEEccccEEeCCC---EEeEchhcCCC-h
Confidence 36889999999999988 999999999999999999999 7655 788776 444444555 78889999997 9
Q ss_pred CcEEEEecChhhHHHHHHcCCcEEEEe
Q 010305 478 SEILFVTDVYQEATAAKAAGKELFVIL 504 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~~i~v~ 504 (513)
++|++|||++.++.++.++|+.+....
T Consensus 113 ~~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 113 SKVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred hhEEEEeCChhhhccCccCEeecCCCC
Confidence 999999999999999999998866544
No 149
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.56 E-value=5.4e-08 Score=94.61 Aligned_cols=92 Identities=21% Similarity=0.172 Sum_probs=63.5
Q ss_pred HHHHHHHCCCeEEEEeCchHHHHH-HHHhccCCCCcccccceee---ec--ccCCCCCHHHHHHHHHHcCCCCCCcE-EE
Q 010305 410 ALEKWHSLGTKVYIYSSGSRLAQR-LIFGNSNYGDLRKYLSGFF---DT--AVGNKRETPSYVEITNSLGVDKPSEI-LF 482 (513)
Q Consensus 410 ~L~~L~~~G~~l~i~Tn~~~~~~~-~~l~~~~~~gl~~~fd~i~---~~--~~~~KP~p~~~~~~l~~l~~~~p~~~-l~ 482 (513)
+...++ +|-...++||.+..... ...... +...+|+.+. .. ....||+|.+|..++++++++ ++++ +|
T Consensus 137 a~~~l~-~~~~~~i~tN~d~~~~~~~g~~~~---~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~-~~~~~~~ 211 (236)
T TIGR01460 137 AAYLLA-EGDVPFIAANRDDLVRLGDGRFRP---GAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQAR-PERRDVM 211 (236)
T ss_pred HHHHHh-CCCCeEEEECCCCCCCCCCCcEee---cchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCC-CccceEE
Confidence 333344 45246688997631111 111122 3444444333 11 236799999999999999997 8887 99
Q ss_pred EecCh-hhHHHHHHcCCcEEEEecC
Q 010305 483 VTDVY-QEATAAKAAGKELFVILDG 506 (513)
Q Consensus 483 VGDs~-~Di~aA~~aG~~~i~v~~G 506 (513)
|||+. .||++|+++|+++++|.||
T Consensus 212 IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 212 VGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred ECCCcHHHHHHHHHCCCcEEEEecC
Confidence 99999 8999999999999999997
No 150
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.55 E-value=2.2e-06 Score=77.95 Aligned_cols=90 Identities=19% Similarity=0.258 Sum_probs=66.1
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccc--ccc--------eee---ec---ccCCCCCHH
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK--YLS--------GFF---DT---AVGNKRETP 463 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~--~fd--------~i~---~~---~~~~KP~p~ 463 (513)
...+-||++++...|+++|.+++++|++-+..+..+-+.+ ||.. .|- +-+ +. ...+--+++
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~L---gi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~ 162 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQL---GIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAE 162 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHh---CCcHhhhhhheeeeccCCcccccccCCccccCCccHH
Confidence 4578999999999999999999999999998888888887 6653 221 111 11 111123456
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChhhHHHHHH
Q 010305 464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKA 495 (513)
Q Consensus 464 ~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~ 495 (513)
.+..+.+ +.. -+.++||||..+|+++-.-
T Consensus 163 ~i~~lrk--~~~-~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 163 VIALLRK--NYN-YKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred HHHHHHh--CCC-hheeEEecCCccccccCCc
Confidence 6666666 665 7799999999999987654
No 151
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.54 E-value=2e-07 Score=101.32 Aligned_cols=92 Identities=23% Similarity=0.242 Sum_probs=77.8
Q ss_pred CccCCCHHHHHHHHHHCCC-eEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCc
Q 010305 401 GEVFDDVPEALEKWHSLGT-KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 479 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~-~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~ 479 (513)
..++||+.++|++|+++|+ +++++||.+...++.+++++ |+.++|..+. |++. ..++++++.+ +++
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~l---gi~~~f~~~~-------p~~K--~~~i~~l~~~-~~~ 427 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL---GIDEVHAELL-------PEDK--LEIVKELREK-YGP 427 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHc---CChhhhhccC-------cHHH--HHHHHHHHhc-CCE
Confidence 4789999999999999999 99999999999999999999 9987765432 2222 4466677776 889
Q ss_pred EEEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 480 ILFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 480 ~l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
++||||+.+|+.++++|| +.+.||+.
T Consensus 428 v~~vGDg~nD~~al~~A~---vgia~g~~ 453 (536)
T TIGR01512 428 VAMVGDGINDAPALAAAD---VGIAMGAS 453 (536)
T ss_pred EEEEeCCHHHHHHHHhCC---EEEEeCCC
Confidence 999999999999999999 48888863
No 152
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.50 E-value=2.2e-07 Score=89.67 Aligned_cols=82 Identities=13% Similarity=0.152 Sum_probs=56.6
Q ss_pred eEEEEeCchHHHHHHHHhccCCCCcc-c-ccc-eeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHc
Q 010305 420 KVYIYSSGSRLAQRLIFGNSNYGDLR-K-YLS-GFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA 496 (513)
Q Consensus 420 ~l~i~Tn~~~~~~~~~l~~~~~~gl~-~-~fd-~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~a 496 (513)
.+.+.++.+.+.....++.+ +.. . ... ..++.......++..+..+++.+|++ ++++++|||+.+|++..+.+
T Consensus 117 ~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~a 192 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEEL---GLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGID-PEEVAAIGDSENDLEMFEVA 192 (230)
T ss_pred eeeecccccHHHHHHHHHHc---CCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhc
Confidence 34555666666666666665 321 0 001 11233445566788999999999997 99999999999999999999
Q ss_pred CCcEEEEecC
Q 010305 497 GKELFVILDG 506 (513)
Q Consensus 497 G~~~i~v~~G 506 (513)
|+.. .+..+
T Consensus 193 g~~v-am~Na 201 (230)
T PRK01158 193 GFGV-AVANA 201 (230)
T ss_pred CceE-EecCc
Confidence 9864 44433
No 153
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.45 E-value=7e-07 Score=87.63 Aligned_cols=80 Identities=16% Similarity=0.181 Sum_probs=63.0
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee-ecccCC-------------------------
Q 010305 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGN------------------------- 458 (513)
Q Consensus 405 pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~-~~~~~~------------------------- 458 (513)
|++.++|++|+++|++++|+||++++.+...++.+ ++..+|+.++ .+....
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~l---gL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~ 227 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKET---KLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDV 227 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHc---CCCccccEEEECCCcccccccceeecccceeEEecCceeEeC
Confidence 79999999999999999999999999999999999 9999999777 111100
Q ss_pred ------CCCHHHHHHHHHHcCCCCCCcEEEEecCh
Q 010305 459 ------KRETPSYVEITNSLGVDKPSEILFVTDVY 487 (513)
Q Consensus 459 ------KP~p~~~~~~l~~l~~~~p~~~l~VGDs~ 487 (513)
-.+|...+..+++.|+.--..+-.|+|-.
T Consensus 228 ~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~ 262 (303)
T PHA03398 228 TDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 262 (303)
T ss_pred CcccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence 12678888888888886234455666655
No 154
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.39 E-value=2.6e-06 Score=81.82 Aligned_cols=80 Identities=14% Similarity=0.082 Sum_probs=56.7
Q ss_pred EEEEeCchHHHHHHHHhccCCCCccccc---ceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcC
Q 010305 421 VYIYSSGSRLAQRLIFGNSNYGDLRKYL---SGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAG 497 (513)
Q Consensus 421 l~i~Tn~~~~~~~~~l~~~~~~gl~~~f---d~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG 497 (513)
..+.+..+.+....+++.+ +..-.+ ...++......++...+..+++++|++ ++++++|||+.+|+.+.+.+|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag 185 (225)
T TIGR01482 110 VKMRYGIDVDTVREIIKEL---GLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIK-PGETLVCGDSENDIDLFEVPG 185 (225)
T ss_pred EEEeecCCHHHHHHHHHhc---CceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCC-HHHEEEECCCHhhHHHHHhcC
Confidence 4455555566666777766 432111 112244455567788899999999998 999999999999999999999
Q ss_pred CcEEEEec
Q 010305 498 KELFVILD 505 (513)
Q Consensus 498 ~~~i~v~~ 505 (513)
.. +.+..
T Consensus 186 ~~-vam~N 192 (225)
T TIGR01482 186 FG-VAVAN 192 (225)
T ss_pred ce-EEcCC
Confidence 86 44433
No 155
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.38 E-value=4.5e-06 Score=82.98 Aligned_cols=90 Identities=9% Similarity=-0.054 Sum_probs=58.3
Q ss_pred HHHHHHCCCeEEEE---eCchHHHHHHHHhccCCCCcc----cccceeeecccCCCCCHHHHHHHHHHcCCCCC-CcEEE
Q 010305 411 LEKWHSLGTKVYIY---SSGSRLAQRLIFGNSNYGDLR----KYLSGFFDTAVGNKRETPSYVEITNSLGVDKP-SEILF 482 (513)
Q Consensus 411 L~~L~~~G~~l~i~---Tn~~~~~~~~~l~~~~~~gl~----~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p-~~~l~ 482 (513)
++.++..++...++ ++.........++.. ++. .+|..+ .... .+...+..+++.++++ + +++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ei---~~~~-~Kg~al~~l~~~~~i~-~~~~v~~ 212 (273)
T PRK00192 141 ARLAKDREFSEPFLWNGSEAAKERFEEALKRL---GLKVTRGGRFLHL---LGGG-DKGKAVRWLKELYRRQ-DGVETIA 212 (273)
T ss_pred HHHHHhcccCCceeecCchHHHHHHHHHHHHc---CCEEEECCeEEEE---eCCC-CHHHHHHHHHHHHhcc-CCceEEE
Confidence 34455555655555 444444455555554 443 222222 2223 4556788999999997 9 99999
Q ss_pred EecChhhHHHHHHcCCcEEEEecCCCC
Q 010305 483 VTDVYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 483 VGDs~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
|||+.+|+.+++.+|+.+ .+..+...
T Consensus 213 ~GDs~NDi~m~~~ag~~v-am~NA~~~ 238 (273)
T PRK00192 213 LGDSPNDLPMLEAADIAV-VVPGPDGP 238 (273)
T ss_pred EcCChhhHHHHHhCCeeE-EeCCCCCC
Confidence 999999999999999764 44555433
No 156
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.37 E-value=3.1e-06 Score=78.52 Aligned_cols=105 Identities=12% Similarity=0.123 Sum_probs=75.2
Q ss_pred cCccCCCHHHHHHHHHHCCC-eEEEEeCchHHHHHHHHhccCCCCcccccceeee------ccc-----CC--------C
Q 010305 400 EGEVFDDVPEALEKWHSLGT-KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD------TAV-----GN--------K 459 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~-~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~------~~~-----~~--------K 459 (513)
..++-||+.++++.+++.|. .+.|+|..+.-+++.++++. ++.+.|..|+. ..+ +. -
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~---~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~C 158 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAA---GIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLC 158 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHc---cHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcC
Confidence 34789999999999999994 99999999999999999999 99999998881 111 11 1
Q ss_pred CC----HHHHHHHH---HHcCCCCCCcEEEEecChhhHHHHHHc-CCcEEEEecCCC
Q 010305 460 RE----TPSYVEIT---NSLGVDKPSEILFVTDVYQEATAAKAA-GKELFVILDGWM 508 (513)
Q Consensus 460 P~----p~~~~~~l---~~l~~~~p~~~l~VGDs~~Di~aA~~a-G~~~i~v~~G~~ 508 (513)
|. -..+.++. .+=|+. -++.+||||+.+|+-.-... +..++....||.
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~-yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVR-YERLIYVGDGANDFCPVLRLRACDVAMPRKGFP 214 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCc-eeeEEEEcCCCCCcCcchhcccCceecccCCCc
Confidence 11 11222221 122565 78999999999998766554 444555556664
No 157
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.35 E-value=1.2e-06 Score=95.89 Aligned_cols=91 Identities=12% Similarity=0.099 Sum_probs=72.7
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcE
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 480 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~ 480 (513)
..++||+.++|++|+++|++++++||.+...++.+.+++ |+. ++.+. .+++++ .++++++.+ +++|
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l---gi~-----~~~~~-~p~~K~----~~v~~l~~~-~~~v 469 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL---GIN-----VRAEV-LPDDKA----ALIKELQEK-GRVV 469 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc---CCc-----EEccC-ChHHHH----HHHHHHHHc-CCEE
Confidence 478999999999999999999999999999999999999 884 23211 122333 344455556 8899
Q ss_pred EEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 481 LFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 481 l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
+||||+.+|+.+++++|+ .|.||+.
T Consensus 470 ~~VGDg~nD~~al~~A~v---gia~g~g 494 (562)
T TIGR01511 470 AMVGDGINDAPALAQADV---GIAIGAG 494 (562)
T ss_pred EEEeCCCccHHHHhhCCE---EEEeCCc
Confidence 999999999999999995 6777764
No 158
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.32 E-value=1.5e-06 Score=73.80 Aligned_cols=82 Identities=20% Similarity=0.154 Sum_probs=65.3
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHc------CC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSL------GV 474 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l------~~ 474 (513)
..+||.+.++++.+++.|+-+..+|=+....+-..++.+ ++..||+.++-+-.+.| -.|+-++++++ .+
T Consensus 40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral---~~~~yFhy~ViePhP~K--~~ML~~llr~i~~er~~~i 114 (164)
T COG4996 40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRAL---DLLQYFHYIVIEPHPYK--FLMLSQLLREINTERNQKI 114 (164)
T ss_pred EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHh---chhhhEEEEEecCCChh--HHHHHHHHHHHHHhhcccc
Confidence 479999999999999999999999988777788889999 99999999874333333 23445555554 45
Q ss_pred CCCCcEEEEecChh
Q 010305 475 DKPSEILFVTDVYQ 488 (513)
Q Consensus 475 ~~p~~~l~VGDs~~ 488 (513)
+ |.+++|++|+..
T Consensus 115 k-P~~Ivy~DDR~i 127 (164)
T COG4996 115 K-PSEIVYLDDRRI 127 (164)
T ss_pred C-cceEEEEecccc
Confidence 5 999999999874
No 159
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.30 E-value=3.8e-07 Score=88.69 Aligned_cols=103 Identities=15% Similarity=0.222 Sum_probs=75.4
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee-----ecccCCCCCHHHHHHHHHHcCCCCCC
Q 010305 404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-----DTAVGNKRETPSYVEITNSLGVDKPS 478 (513)
Q Consensus 404 ~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~-----~~~~~~KP~p~~~~~~l~~l~~~~p~ 478 (513)
|+....++.+|++-++ ++++||.+...- .....-..|--.+...+. +.....||++.++..++++++++ |+
T Consensus 167 y~KL~kA~~yLqnP~c-lflatn~D~~~p--~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~-ps 242 (306)
T KOG2882|consen 167 YPKLMKALNYLQNPGC-LFLATNRDATTP--PTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNID-PS 242 (306)
T ss_pred HHHHHHHHHHhCCCCc-EEEeccCccccC--CCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCC-cc
Confidence 6677789999998887 779999875322 111110001111112221 22446799999999999999998 99
Q ss_pred cEEEEecCh-hhHHHHHHcCCcEEEEecCCCCc
Q 010305 479 EILFVTDVY-QEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 479 ~~l~VGDs~-~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
+|+||||+. +||..|++.|+++++|.+|-++.
T Consensus 243 Rt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~l 275 (306)
T KOG2882|consen 243 RTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTL 275 (306)
T ss_pred eEEEEcccchhhhhHhhccCcceEEEecCcCcH
Confidence 999999999 79999999999999999997653
No 160
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.25 E-value=3e-06 Score=97.11 Aligned_cols=93 Identities=17% Similarity=0.207 Sum_probs=78.2
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcE
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 480 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~ 480 (513)
.+++||+.++|+.|++.|++++++|+.+....+.+.+.+ |+.++|..+. |+.-..++++++.+ ++++
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~l---gi~~~~~~~~---------p~~K~~~i~~l~~~-~~~v 715 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA---GIDEVIAGVL---------PDGKAEAIKRLQSQ-GRQV 715 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---CCCEEEeCCC---------HHHHHHHHHHHhhc-CCEE
Confidence 378999999999999999999999999999999999999 8876554322 22335678888887 8999
Q ss_pred EEEecChhhHHHHHHcCCcEEEEecCCCC
Q 010305 481 LFVTDVYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 481 l~VGDs~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
+||||+.+|+.++++||+ +|.||+.+
T Consensus 716 ~~vGDg~nD~~al~~Agv---gia~g~g~ 741 (834)
T PRK10671 716 AMVGDGINDAPALAQADV---GIAMGGGS 741 (834)
T ss_pred EEEeCCHHHHHHHHhCCe---eEEecCCC
Confidence 999999999999999999 66777654
No 161
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.19 E-value=1.1e-05 Score=77.23 Aligned_cols=78 Identities=17% Similarity=0.181 Sum_probs=56.4
Q ss_pred eEEEEeCchHHHHHHHHhccCCCCccccccee-eecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCC
Q 010305 420 KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF-FDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGK 498 (513)
Q Consensus 420 ~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i-~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~ 498 (513)
..++.++.........++.. ++..++... ++-......+...+..+++++|++ ++++++|||+.+|+++.+.+|+
T Consensus 109 ~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~-~~~~i~iGDs~ND~~ml~~ag~ 184 (215)
T TIGR01487 109 LVIMREGKDVDEVREIIKER---GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK-PEEVAAIGDSENDIDLFRVVGF 184 (215)
T ss_pred EEEecCCccHHHHHHHHHhC---CeEEEecCceEEEecCCCChHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCC
Confidence 44556666666677777766 655443322 232333445667999999999998 9999999999999999999997
Q ss_pred cEE
Q 010305 499 ELF 501 (513)
Q Consensus 499 ~~i 501 (513)
..+
T Consensus 185 ~va 187 (215)
T TIGR01487 185 KVA 187 (215)
T ss_pred eEE
Confidence 744
No 162
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=98.14 E-value=7.3e-06 Score=68.59 Aligned_cols=84 Identities=12% Similarity=0.048 Sum_probs=52.8
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchH---HHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSR---LAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 478 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~---~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~ 478 (513)
.++||+.++|+.|+++|++++++||++. ......++.+ |+.---+.++.. .......+++. .. ..
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~---Gi~~~~~~i~ts-------~~~~~~~l~~~-~~-~~ 81 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKL---GIPVDEDEIITS-------GMAAAEYLKEH-KG-GK 81 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHT---TTT--GGGEEEH-------HHHHHHHHHHH-TT-SS
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhc---CcCCCcCEEECh-------HHHHHHHHHhc-CC-CC
Confidence 3789999999999999999999999973 3344555667 776444555531 23334444443 22 45
Q ss_pred cEEEEecChhhHHHHHHcCC
Q 010305 479 EILFVTDVYQEATAAKAAGK 498 (513)
Q Consensus 479 ~~l~VGDs~~Di~aA~~aG~ 498 (513)
++++||-. ...+..+++|+
T Consensus 82 ~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 82 KVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEEES-H-HHHHHHHHTTE
T ss_pred EEEEEcCH-HHHHHHHHcCC
Confidence 78888864 55566666664
No 163
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.06 E-value=3e-06 Score=79.62 Aligned_cols=90 Identities=16% Similarity=0.185 Sum_probs=53.9
Q ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEeCchHH-------HHHHHHh-ccCCCCcccccceee-ecccCCCCCHHHHHHHH
Q 010305 399 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRL-------AQRLIFG-NSNYGDLRKYLSGFF-DTAVGNKRETPSYVEIT 469 (513)
Q Consensus 399 ~~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~-------~~~~~l~-~~~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~l 469 (513)
...+++||+.++|++|.+.|+.+.++|..+.. .....++ ++ +... ++.++ . ..|-
T Consensus 70 ~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf---~~i~-~~~~~~~---~~K~--------- 133 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHF---PFIP-YDNLIFT---GDKT--------- 133 (191)
T ss_dssp TT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHH---THHH-HCCEEEE---SSGG---------
T ss_pred cCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHc---CCCc-hheEEEe---cCCC---------
Confidence 35689999999999999999777777766533 2222222 33 2222 12222 2 1221
Q ss_pred HHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCCCCc
Q 010305 470 NSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 470 ~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
.++.+ ++|+|++..+..+.+.|+.++++...|+..
T Consensus 134 -~v~~D-----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~ 168 (191)
T PF06941_consen 134 -LVGGD-----VLIDDRPHNLEQFANAGIPVILFDQPYNRD 168 (191)
T ss_dssp -GC--S-----EEEESSSHHHSS-SSESSEEEEE--GGGTT
T ss_pred -eEecc-----EEecCChHHHHhccCCCceEEEEcCCCCCC
Confidence 22332 899999999999999999999998777653
No 164
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.06 E-value=5.9e-05 Score=68.15 Aligned_cols=90 Identities=16% Similarity=0.067 Sum_probs=63.3
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee----------------ec--ccCCCCCH
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----------------DT--AVGNKRET 462 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~----------------~~--~~~~KP~p 462 (513)
+.+-||.+++++..++++++.+|+|++....+..+++.+....-....|.+. ++ .+..||.
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~- 150 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSS- 150 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcch-
Confidence 4688999999999999999999999999999999999872100011111111 11 1222432
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcC
Q 010305 463 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAG 497 (513)
Q Consensus 463 ~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG 497 (513)
....+.-. ++.++|.||+..|+.+|+..-
T Consensus 151 -----vI~~l~e~-~e~~fy~GDsvsDlsaaklsD 179 (220)
T COG4359 151 -----VIHELSEP-NESIFYCGDSVSDLSAAKLSD 179 (220)
T ss_pred -----hHHHhhcC-CceEEEecCCcccccHhhhhh
Confidence 33444443 888999999999999998754
No 165
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.02 E-value=6.1e-05 Score=72.20 Aligned_cols=78 Identities=9% Similarity=0.003 Sum_probs=51.9
Q ss_pred CCCeEEE-EeCchHHHHHHHHhccCCCCcc----cccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHH
Q 010305 417 LGTKVYI-YSSGSRLAQRLIFGNSNYGDLR----KYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEAT 491 (513)
Q Consensus 417 ~G~~l~i-~Tn~~~~~~~~~l~~~~~~gl~----~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~ 491 (513)
.++.+.+ .++.........++.. ++. .+|..+.. .... ++.....+++.+|++ ++++++|||+.+|+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ei~~-~~~~--Kg~al~~l~~~lgi~-~~~vi~~GD~~NDi~ 209 (221)
T TIGR02463 137 ASVPLLWRDSDSRMPRFTALLADL---GLAIVQGNRFSHVLG-ASSS--KGKAANWLKATYNQP-DVKTLGLGDGPNDLP 209 (221)
T ss_pred CCccEEecCchhHHHHHHHHHHHc---CCeEEecCCeeEEec-CCCC--HHHHHHHHHHHhCCC-CCcEEEECCCHHHHH
Confidence 3343333 3445555555666655 554 33333321 1122 445689999999998 999999999999999
Q ss_pred HHHHcCCcEE
Q 010305 492 AAKAAGKELF 501 (513)
Q Consensus 492 aA~~aG~~~i 501 (513)
..+.+|...+
T Consensus 210 ml~~ag~~va 219 (221)
T TIGR02463 210 LLEVADYAVV 219 (221)
T ss_pred HHHhCCceEE
Confidence 9999997754
No 166
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.93 E-value=1.5e-05 Score=76.98 Aligned_cols=87 Identities=17% Similarity=0.177 Sum_probs=55.9
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHH---HHHHHHhccCCCCcccccceee--ecccCCC----C-CHHHHHHHHHH
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNYGDLRKYLSGFF--DTAVGNK----R-ETPSYVEITNS 471 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~---~~~~~l~~~~~~gl~~~fd~i~--~~~~~~K----P-~p~~~~~~l~~ 471 (513)
++.||+.++++.++++|++++++||.+.. ....-|... |+..+ +.++ ......+ . +..-...+.++
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~---G~~~~-~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~ 190 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKA---GFPGW-DHLILRPDKDPSKKSAVEYKSERRKEIEKK 190 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHH---TTSTB-SCGEEEEESSTSS------SHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHc---CCCcc-chhccccccccccccccccchHHHHHHHHc
Confidence 68899999999999999999999998744 444555556 65433 4444 2111111 1 23333444444
Q ss_pred cCCCCCCcEEEEecChhhHHHHHHc
Q 010305 472 LGVDKPSEILFVTDVYQEATAAKAA 496 (513)
Q Consensus 472 l~~~~p~~~l~VGDs~~Di~aA~~a 496 (513)
|.. =+++|||..+|+.+++..
T Consensus 191 -Gy~---Ii~~iGD~~~D~~~~~~~ 211 (229)
T PF03767_consen 191 -GYR---IIANIGDQLSDFSGAKTA 211 (229)
T ss_dssp -TEE---EEEEEESSGGGCHCTHHH
T ss_pred -CCc---EEEEeCCCHHHhhccccc
Confidence 332 258899999999985443
No 167
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.89 E-value=1.4e-05 Score=81.24 Aligned_cols=51 Identities=18% Similarity=0.136 Sum_probs=45.1
Q ss_pred cCCCCCHHHHHHHHHHc--------CCC----CCCcEEEEecCh-hhHHHHHHcCCcEEEEecC
Q 010305 456 VGNKRETPSYVEITNSL--------GVD----KPSEILFVTDVY-QEATAAKAAGKELFVILDG 506 (513)
Q Consensus 456 ~~~KP~p~~~~~~l~~l--------~~~----~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~G 506 (513)
...||+|.+|..+++.+ +++ ++++++||||++ +||.+|+++||.+++|.+|
T Consensus 230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG 293 (321)
T TIGR01456 230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTG 293 (321)
T ss_pred EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEeccc
Confidence 35899999999999887 432 257999999999 9999999999999999998
No 168
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=97.89 E-value=3.6e-05 Score=88.68 Aligned_cols=99 Identities=17% Similarity=0.102 Sum_probs=82.9
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeee--c----------------ccCCCCCHH
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD--T----------------AVGNKRETP 463 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~--~----------------~~~~KP~p~ 463 (513)
+++||+.++|+.|+++|+++.++|+.+...+..+.+.+ |+...++.++. + .....+.|+
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~---Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~ 604 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRL---GMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPE 604 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHH
Confidence 78999999999999999999999999999999999999 99776655431 0 123446677
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCC
Q 010305 464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDGW 507 (513)
Q Consensus 464 ~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~ 507 (513)
--..+.+.++-. .+.+.||||+.+|+.+.++|+ |+|.+|.
T Consensus 605 ~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~Ad---VGia~g~ 644 (884)
T TIGR01522 605 HKMKIVKALQKR-GDVVAMTGDGVNDAPALKLAD---IGVAMGQ 644 (884)
T ss_pred HHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCC---eeEecCC
Confidence 778888888776 789999999999999999999 5777775
No 169
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.86 E-value=0.00011 Score=66.77 Aligned_cols=95 Identities=8% Similarity=0.074 Sum_probs=56.9
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHH---HHHhccCCC--Ccccccceee-ec----------ccCCCC---CHH
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR---LIFGNSNYG--DLRKYLSGFF-DT----------AVGNKR---ETP 463 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~---~~l~~~~~~--gl~~~fd~i~-~~----------~~~~KP---~p~ 463 (513)
..|++.+++++|+++|++++++|+.+..... ..++.+... ++.. ..++ .. ....+| +.+
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g~li~~~g~~~~~~~~e~i~~~~~~~K~~ 105 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--GPVLLSPDRLFAALHREVISKKPEVFKIA 105 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--ceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence 5589999999999999999999999876653 455541000 1211 1222 11 112333 333
Q ss_pred HHHHHHHHcCCCCCCcEE-EEecChhhHHHHHHcCCcE
Q 010305 464 SYVEITNSLGVDKPSEIL-FVTDVYQEATAAKAAGKEL 500 (513)
Q Consensus 464 ~~~~~l~~l~~~~p~~~l-~VGDs~~Di~aA~~aG~~~ 500 (513)
....+.+.+.-. -...+ -+||+.+|+++=+++|+..
T Consensus 106 ~l~~i~~~~~~~-~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 106 CLRDIKSLFPPQ-GNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred HHHHHHHhcCCC-CCCEEEEeCCCchhHHHHHHcCCCh
Confidence 444444443211 11233 3678889999999999974
No 170
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.85 E-value=8.8e-05 Score=71.02 Aligned_cols=92 Identities=13% Similarity=0.147 Sum_probs=58.2
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHH---HHHHHhccCCCCcccccceee-ec-ccCCCCC----HHHHHHHHHH
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGNSNYGDLRKYLSGFF-DT-AVGNKRE----TPSYVEITNS 471 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~---~~~~l~~~~~~gl~~~fd~i~-~~-~~~~KP~----p~~~~~~l~~ 471 (513)
.++.|++.++++.|+++|++++++|+.+... +..-|... |+..+ +.++ -. ....|+. .+....+.++
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~---G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~ 194 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINA---GFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEE 194 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHc---CCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhC
Confidence 4799999999999999999999999998765 54555556 66554 5555 21 2223321 1222222211
Q ss_pred cCCCCCCcEEEEecChhhHHHHHHcCCcEE
Q 010305 472 LGVDKPSEILFVTDVYQEATAAKAAGKELF 501 (513)
Q Consensus 472 l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i 501 (513)
|-. =+..|||..+|+.++ .+|.+++
T Consensus 195 -GYr---Iv~~iGDq~sDl~G~-~~~~RtF 219 (229)
T TIGR01675 195 -GYR---IWGNIGDQWSDLLGS-PPGRRTF 219 (229)
T ss_pred -Cce---EEEEECCChHHhcCC-CccCcee
Confidence 211 246789999999653 4554544
No 171
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.83 E-value=7.9e-05 Score=78.44 Aligned_cols=103 Identities=17% Similarity=0.204 Sum_probs=73.2
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCC------Ccccccceee-ecc----------------cCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG------DLRKYLSGFF-DTA----------------VGN 458 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~------gl~~~fd~i~-~~~----------------~~~ 458 (513)
..-|.+..+|+.||+.|.+++++||++-.++...++.+-.. .+.++||.|+ +.. ...
T Consensus 183 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g 262 (448)
T PF05761_consen 183 HKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETG 262 (448)
T ss_dssp E--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTS
T ss_pred cCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCC
Confidence 45689999999999999999999999999999999988666 7999999988 110 001
Q ss_pred C--C-------------CHHHHHHHHHHcCCCCCCcEEEEecCh-hhHHHHHHc-CCcEEEEec
Q 010305 459 K--R-------------ETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAA-GKELFVILD 505 (513)
Q Consensus 459 K--P-------------~p~~~~~~l~~l~~~~p~~~l~VGDs~-~Di~aA~~a-G~~~i~v~~ 505 (513)
+ . .-.-....++.+|.. ..+++||||+. .||..++.. |++|++|..
T Consensus 263 ~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~-g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ 325 (448)
T PF05761_consen 263 KLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWR-GKEVLYFGDHIYGDILKSKKRHGWRTAAIIP 325 (448)
T ss_dssp SEECS---SS--TC-EEEE--HHHHHHHCT---GGGEEEEESSTTTTHHHHHHHH-SEEEEE-T
T ss_pred ccccccccccccCCCEeecCCHHHHHHHHccC-CCeEEEECCchhhhhhhhccccceEEEEEeh
Confidence 1 1 112345566778887 89999999999 799988887 999999863
No 172
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.80 E-value=0.00012 Score=71.69 Aligned_cols=54 Identities=11% Similarity=0.125 Sum_probs=47.2
Q ss_pred ecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCC
Q 010305 453 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDGW 507 (513)
Q Consensus 453 ~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~ 507 (513)
+.....+++...+..++++++++ +++|++|||+.+|+...+.++..++++..+.
T Consensus 160 di~~~~~~K~~al~~l~~~~~i~-~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 160 DILPQGSGKGQALQYLLQKLAME-PSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred EEEeCCCChHHHHHHHHHHcCCC-ccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 44566788899999999999997 9999999999999999999888888887653
No 173
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.70 E-value=0.00017 Score=81.43 Aligned_cols=90 Identities=21% Similarity=0.189 Sum_probs=71.0
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcE
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 480 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~ 480 (513)
.+++||+.++|+.|+++|++++++|+.+...++.+.+.+ |+..++. .....|+ .++++++ . +.++
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~l---gi~~~~~----~~p~~K~------~~v~~l~-~-~~~v 631 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL---GIDFRAG----LLPEDKV------KAVTELN-Q-HAPL 631 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCeecC----CCHHHHH------HHHHHHh-c-CCCE
Confidence 378999999999999999999999999999999999999 8853322 1111222 2555555 3 5689
Q ss_pred EEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 481 LFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 481 l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
+||||+.+|..+.++|+ ++|.+|..
T Consensus 632 ~mvGDgiNDapAl~~A~---vgia~g~~ 656 (741)
T PRK11033 632 AMVGDGINDAPAMKAAS---IGIAMGSG 656 (741)
T ss_pred EEEECCHHhHHHHHhCC---eeEEecCC
Confidence 99999999999999999 66666654
No 174
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.64 E-value=0.00024 Score=69.30 Aligned_cols=97 Identities=13% Similarity=0.184 Sum_probs=56.2
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHH-HH---HcCC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI-TN---SLGV 474 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~-l~---~l~~ 474 (513)
+++.|++.++.+.|+++|++++++||.+......-++.+...|+..+ +.++ +.....+.+.-.|... .+ +-|-
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~eGY 222 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQEGY 222 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHcCc
Confidence 47899999999999999999999999986543333333322266543 5555 2211222222222211 11 1122
Q ss_pred CCCCcEEEEecChhhHHHHHHcCCcEE
Q 010305 475 DKPSEILFVTDVYQEATAAKAAGKELF 501 (513)
Q Consensus 475 ~~p~~~l~VGDs~~Di~aA~~aG~~~i 501 (513)
. =+..|||..+|+.+....+-+++
T Consensus 223 r---Iv~~iGDq~sDl~G~~~g~~RtF 246 (275)
T TIGR01680 223 N---IVGIIGDQWNDLKGEHRGAIRSF 246 (275)
T ss_pred e---EEEEECCCHHhccCCCccCccee
Confidence 1 24778999999976552223443
No 175
>PRK10976 putative hydrolase; Provisional
Probab=97.54 E-value=0.00069 Score=66.84 Aligned_cols=48 Identities=17% Similarity=0.250 Sum_probs=40.0
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecC
Q 010305 457 GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 457 ~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G 506 (513)
..--+...+..+++.+|++ +++++.|||+.+|++.-+.+|.. +.+..+
T Consensus 187 ~gvsKg~al~~l~~~lgi~-~~~viafGD~~NDi~Ml~~ag~~-vAm~NA 234 (266)
T PRK10976 187 GGVSKGHALEAVAKKLGYS-LKDCIAFGDGMNDAEMLSMAGKG-CIMGNA 234 (266)
T ss_pred CCCChHHHHHHHHHHcCCC-HHHeEEEcCCcccHHHHHHcCCC-eeecCC
Confidence 3334578899999999998 99999999999999999999985 444444
No 176
>PLN02645 phosphoglycolate phosphatase
Probab=97.46 E-value=0.00074 Score=68.41 Aligned_cols=90 Identities=18% Similarity=0.227 Sum_probs=67.8
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 478 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~---~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~ 478 (513)
.++||+.++|+.|+++|++++++||++ .......++.+ |+...++.++.. .......+++.+.. ..
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~l---Gi~~~~~~I~ts-------~~~~~~~l~~~~~~-~~ 112 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESL---GLNVTEEEIFSS-------SFAAAAYLKSINFP-KD 112 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHC---CCCCChhhEeeh-------HHHHHHHHHhhccC-CC
Confidence 488999999999999999999999988 33334445667 777666666632 12445566666664 55
Q ss_pred cEEEEecChhhHHHHHHcCCcEEE
Q 010305 479 EILFVTDVYQEATAAKAAGKELFV 502 (513)
Q Consensus 479 ~~l~VGDs~~Di~aA~~aG~~~i~ 502 (513)
+.+||+++..+.+.++++|+.++.
T Consensus 113 ~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 113 KKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred CEEEEEcCHHHHHHHHHCCCEEec
Confidence 678998899999999999998654
No 177
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=97.45 E-value=0.0006 Score=66.90 Aligned_cols=46 Identities=13% Similarity=0.235 Sum_probs=39.4
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEE
Q 010305 455 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELF 501 (513)
Q Consensus 455 ~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i 501 (513)
....-.+-..+..+++.++++ ++++++|||+.+|+.+.+.+|+.++
T Consensus 183 ~~~~~~K~~~i~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~~~~~~a 228 (256)
T TIGR00099 183 TAKGVSKGSALQSLAEALGIS-LEDVIAFGDGMNDIEMLEAAGYGVA 228 (256)
T ss_pred cCCCCChHHHHHHHHHHcCCC-HHHEEEeCCcHHhHHHHHhCCceeE
Confidence 334445678899999999997 9999999999999999999998643
No 178
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.41 E-value=0.00039 Score=62.48 Aligned_cols=93 Identities=17% Similarity=0.209 Sum_probs=62.4
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHH----HHHhccCCCCcccccceeeecccCCCCCHHHHHH--HHHHcCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQR----LIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVE--ITNSLGVD 475 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~----~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~--~l~~l~~~ 475 (513)
.+-+-++++|..-.++|=+++.+|+.+...++ .+.+.+ .+..--..+| .+.||+|.-|.+ .++..++.
T Consensus 114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F---~i~~m~pv~f---~Gdk~k~~qy~Kt~~i~~~~~~ 187 (237)
T COG3700 114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNF---HITNMNPVIF---AGDKPKPGQYTKTQWIQDKNIR 187 (237)
T ss_pred chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhc---ccCCCcceee---ccCCCCcccccccHHHHhcCce
Confidence 34445677888888899999999998755333 233334 4433222222 234665655554 45555554
Q ss_pred CCCcEEEEecChhhHHHHHHcCCcEEEEec
Q 010305 476 KPSEILFVTDVYQEATAAKAAGKELFVILD 505 (513)
Q Consensus 476 ~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 505 (513)
++-|||-+||.+|+.+|++.|-+..
T Consensus 188 -----IhYGDSD~Di~AAkeaG~RgIRilR 212 (237)
T COG3700 188 -----IHYGDSDNDITAAKEAGARGIRILR 212 (237)
T ss_pred -----EEecCCchhhhHHHhcCccceeEEe
Confidence 8999999999999999999988764
No 179
>KOG3699 consensus Cytoskeletal protein Adducin [Signal transduction mechanisms; Cytoskeleton]
Probab=97.41 E-value=7.7e-05 Score=78.56 Aligned_cols=174 Identities=18% Similarity=0.195 Sum_probs=114.4
Q ss_pred cCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCeecCCCCCC-CCCCCCCCCCchHHHHHH
Q 010305 44 LGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP-YPHKPPKCSDCAPLFMKA 122 (513)
Q Consensus 44 ~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~~g~~~~g~~~~p-~~~~p~~~S~E~~lH~~i 122 (513)
.+|..++.+++.+|+.+- -+-.-++++|-+....+....+...+|.+|....+.-..- -..+ +.-+..|.+|
T Consensus 364 ~~~ne~s~~~~pVrIedP---~qfvp~~~NP~Evle~rnkIreqnr~D~ksAGPQSqlL~~V~~e~----s~~~~~~Sai 436 (598)
T KOG3699|consen 364 EDWNEGSASHTPVRIEDP---NQFVPLLINPKEVLEMRNKIREQNRQDVKSAGPQSQLLASVTAEK----SRSLSTHSAI 436 (598)
T ss_pred ccccccccCCceeeccCC---CCccccccCHHHHHHHHhhHHHhhhccccccCCCcceecceeccc----ccccchhhhh
Confidence 378899999999998751 1123699999999999999999999999875433210000 0011 1223479999
Q ss_pred HHhc-CccEEEecCChHHHHHHhhcCCCcccccchHHHH-hhhcCCcccccceeeeecCCCCchHHHHHHHHHHhhCCCc
Q 010305 123 YEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMI-KGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKA 200 (513)
Q Consensus 123 y~~~-d~~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~vpv~~~~~~~~~la~~v~~~l~~~~~~ 200 (513)
++.+ +++||+|.|.+...+-++......++ ..+.. +..+ .|++...++.- ++.. + +.+ +..
T Consensus 437 ~~~r~e~k~v~h~~~~pnpf~~ltd~eL~EY---kqeverk~~~--~~~d~d~~~~d---~~e~--a----kd~---~~~ 499 (598)
T KOG3699|consen 437 HQVRPEVKCVCHRHYPPNPFVSLTDHELLEY---KQEVERKGKG--VYHDYDGILSD---PGEQ--A----KDL---ADS 499 (598)
T ss_pred hhcCCcccceeecccCCCcccccCchhhhhh---hhhhhccCcc--ccccccccccc---cccc--c----ccc---ccC
Confidence 9999 99999999999887777765432222 11111 1111 12221112221 1111 1 222 335
Q ss_pred eEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 010305 201 TAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243 (513)
Q Consensus 201 ~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~ 243 (513)
+ ++++|||+.+.|++++ |...+-..|-+|+.+.....++.+
T Consensus 500 p-v~~~nh~i~Tq~~~V~-aa~~~sl~~~a~~~q~s~as~~~~ 540 (598)
T KOG3699|consen 500 P-VILRNHGIMTQGESVE-AAYLLSLMELACETQLSIASATAP 540 (598)
T ss_pred C-cccccccceecccccc-cchhhHHHHHHHHhhhhhccccCC
Confidence 6 9999999999999999 888888999999999877666655
No 180
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.38 E-value=0.00043 Score=62.69 Aligned_cols=79 Identities=18% Similarity=0.166 Sum_probs=60.4
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcc-ccc-ceee--ecccCCCCCHHHHHHHH-HHcCCC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYL-SGFF--DTAVGNKRETPSYVEIT-NSLGVD 475 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~-~~f-d~i~--~~~~~~KP~p~~~~~~l-~~l~~~ 475 (513)
..++||+.++|+.|++. ++++|+||+++..+..+++.+ +.. .+| +.++ ++.. .+ +.+-+ .-++.+
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~l---dp~~~~F~~ri~~rd~~~--~~----~~KdL~~i~~~d 126 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLI---DPDGKYFGDRIISRDESG--SP----HTKSLLRLFPAD 126 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHh---CcCCCeeccEEEEeccCC--CC----ccccHHHHcCCC
Confidence 47899999999999965 999999999999999999999 777 478 5556 3222 11 12224 335776
Q ss_pred CCCcEEEEecChhhH
Q 010305 476 KPSEILFVTDVYQEA 490 (513)
Q Consensus 476 ~p~~~l~VGDs~~Di 490 (513)
.+.+++|+|++.=.
T Consensus 127 -~~~vvivDd~~~~~ 140 (156)
T TIGR02250 127 -ESMVVIIDDREDVW 140 (156)
T ss_pred -cccEEEEeCCHHHh
Confidence 89999999998433
No 181
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=97.19 E-value=0.0013 Score=63.89 Aligned_cols=84 Identities=8% Similarity=0.049 Sum_probs=48.9
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHH---HHHHHHhc-cCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCC
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGN-SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 478 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~---~~~~~l~~-~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~ 478 (513)
++|++.++|+.|+++|+++.++||++.. .....+.. + ++.-..+.++.. .......+++.. . ..
T Consensus 15 ~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~---g~~~~~~~iits-------~~~~~~~l~~~~-~-~~ 82 (236)
T TIGR01460 15 PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLL---GVDVSPDQIITS-------GSVTKDLLRQRF-E-GE 82 (236)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhc---CCCCCHHHeeeH-------HHHHHHHHHHhC-C-CC
Confidence 5789999999999999999999988632 22233333 5 554444455421 122222233222 2 34
Q ss_pred cEEEEecChhhHHHHHHcCCc
Q 010305 479 EILFVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 479 ~~l~VGDs~~Di~aA~~aG~~ 499 (513)
.++++|.. ...+..+..|+.
T Consensus 83 ~v~v~G~~-~~~~~l~~~g~~ 102 (236)
T TIGR01460 83 KVYVIGVG-ELRESLEGLGFR 102 (236)
T ss_pred EEEEECCH-HHHHHHHHcCCc
Confidence 57777753 344555666653
No 182
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=97.18 E-value=0.00067 Score=67.25 Aligned_cols=36 Identities=14% Similarity=0.390 Sum_probs=26.6
Q ss_pred HHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEec
Q 010305 468 ITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILD 505 (513)
Q Consensus 468 ~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 505 (513)
+++.+|++ +++++.|||+.||++.-+.+|.. +.+..
T Consensus 196 l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~-vAm~N 231 (272)
T PRK15126 196 LSQHLGLS-LADCMAFGDAMNDREMLGSVGRG-FIMGN 231 (272)
T ss_pred HHHHhCCC-HHHeEEecCCHHHHHHHHHcCCc-eeccC
Confidence 44556776 88899999999999888888864 44443
No 183
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.18 E-value=0.014 Score=57.16 Aligned_cols=105 Identities=14% Similarity=0.225 Sum_probs=74.5
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcc--cc-cc--e---------------ee-ec--ccCCC
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR--KY-LS--G---------------FF-DT--AVGNK 459 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~--~~-fd--~---------------i~-~~--~~~~K 459 (513)
.-+++.++++.|+++|+++..+|..+.......++.+...|+. .. |. . +| +. ....-
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~ 161 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQ 161 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCCC
Confidence 4579999999999999999999999877665555544322442 11 00 0 00 00 11234
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEecChhhHHH----HHHcCCcEEEEecCCC
Q 010305 460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATA----AKAAGKELFVILDGWM 508 (513)
Q Consensus 460 P~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~a----A~~aG~~~i~v~~G~~ 508 (513)
++-+++...+.++|.. |+.++||+|+..++.. .++.|+..+++.|...
T Consensus 162 ~KG~~L~~fL~~~~~~-pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 162 DKGEVLKYFLDKINQS-PKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred ccHHHHHHHHHHcCCC-CCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 5668999999999998 9999999999977754 4456999999887643
No 184
>PLN02887 hydrolase family protein
Probab=97.16 E-value=0.0042 Score=67.86 Aligned_cols=52 Identities=19% Similarity=0.264 Sum_probs=41.8
Q ss_pred ecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecC
Q 010305 453 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 453 ~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G 506 (513)
+-....-.+-..+..+++.+|++ +++++.|||+.||++.-+.+|.. |.+..+
T Consensus 500 EI~p~gvSKG~ALk~L~e~lGI~-~eeviAFGDs~NDIeMLe~AG~g-VAMgNA 551 (580)
T PLN02887 500 EIVPPGTSKGNGVKMLLNHLGVS-PDEIMAIGDGENDIEMLQLASLG-VALSNG 551 (580)
T ss_pred EEecCCCCHHHHHHHHHHHcCCC-HHHEEEEecchhhHHHHHHCCCE-EEeCCC
Confidence 33333444577899999999998 99999999999999999999985 555444
No 185
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=97.12 E-value=0.0011 Score=65.57 Aligned_cols=17 Identities=24% Similarity=0.344 Sum_probs=14.8
Q ss_pred CCCeEEEEccccccccc
Q 010305 282 LFPRCIVLDIEGTTTPI 298 (513)
Q Consensus 282 ~~ikavlFDlDGTL~d~ 298 (513)
|++|.|+||+||||++.
T Consensus 1 m~~kli~~DlDGTLl~~ 17 (270)
T PRK10513 1 MAIKLIAIDMDGTLLLP 17 (270)
T ss_pred CceEEEEEecCCcCcCC
Confidence 35899999999999874
No 186
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=97.06 E-value=0.001 Score=65.52 Aligned_cols=38 Identities=16% Similarity=0.235 Sum_probs=31.4
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEE
Q 010305 463 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELF 501 (513)
Q Consensus 463 ~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i 501 (513)
.....+++++|++ +++++.+||+.+|++.-+.+|...+
T Consensus 192 ~al~~l~~~lgi~-~~~v~afGD~~ND~~Ml~~ag~gva 229 (264)
T COG0561 192 YALQRLAKLLGIK-LEEVIAFGDSTNDIEMLEVAGLGVA 229 (264)
T ss_pred HHHHHHHHHhCCC-HHHeEEeCCccccHHHHHhcCeeee
Confidence 3556667778897 8999999999999999998887643
No 187
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.05 E-value=0.0042 Score=53.28 Aligned_cols=92 Identities=15% Similarity=0.235 Sum_probs=75.1
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEE
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l 481 (513)
++|+.+.+.|+.|++. +.++|+|.-..-.+..+.+.. |+.- +.++ .-.+|++=.++++.++-+ -+.|+
T Consensus 30 klf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~---gi~~--~rv~-----a~a~~e~K~~ii~eLkk~-~~k~v 97 (152)
T COG4087 30 KLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFV---GIPV--ERVF-----AGADPEMKAKIIRELKKR-YEKVV 97 (152)
T ss_pred EEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHc---CCce--eeee-----cccCHHHHHHHHHHhcCC-CcEEE
Confidence 7999999999999999 999999999888888888877 6432 2222 233677778899999875 79999
Q ss_pred EEecChhhHHHHHHcCCcEEEEec
Q 010305 482 FVTDVYQEATAAKAAGKELFVILD 505 (513)
Q Consensus 482 ~VGDs~~Di~aA~~aG~~~i~v~~ 505 (513)
||||..+|+.+-++|-+..+-+..
T Consensus 98 mVGnGaND~laLr~ADlGI~tiq~ 121 (152)
T COG4087 98 MVGNGANDILALREADLGICTIQQ 121 (152)
T ss_pred EecCCcchHHHhhhcccceEEecc
Confidence 999999999999999887666553
No 188
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.98 E-value=0.0014 Score=64.72 Aligned_cols=39 Identities=15% Similarity=0.142 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccc
Q 010305 406 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY 447 (513)
Q Consensus 406 g~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~ 447 (513)
.+.++|++|+++|++++++|+++...+..+.+.+ ++..+
T Consensus 22 ~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~L---gl~~p 60 (302)
T PRK12702 22 AARQALAALERRSIPLVLYSLRTRAQLEHLCRQL---RLEHP 60 (302)
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHh---CCCCe
Confidence 4567788899999999999999999888888888 76543
No 189
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=96.95 E-value=0.002 Score=74.78 Aligned_cols=98 Identities=18% Similarity=0.148 Sum_probs=73.0
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccccc----ceeee------------------cccCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL----SGFFD------------------TAVGNK 459 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~f----d~i~~------------------~~~~~K 459 (513)
+++|++.++|+.|+++|+++.++|+.+...+..+.+.+ |+...= ...++ .....+
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~---gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar 613 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRI---GIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSR 613 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHc---CCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEe
Confidence 68999999999999999999999999999999999988 774310 01111 011223
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecC
Q 010305 460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 460 P~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G 506 (513)
-.|+-=..+.+.++-. .+.+.|+||+.+|+.+.++|++ +|.+|
T Consensus 614 ~~P~~K~~iV~~lq~~-g~~va~iGDG~ND~~alk~AdV---Gia~g 656 (917)
T TIGR01116 614 VEPSHKSELVELLQEQ-GEIVAMTGDGVNDAPALKKADI---GIAMG 656 (917)
T ss_pred cCHHHHHHHHHHHHhc-CCeEEEecCCcchHHHHHhCCe---eEECC
Confidence 3344446666777765 7889999999999999999998 44444
No 190
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=96.88 E-value=0.0018 Score=62.44 Aligned_cols=34 Identities=29% Similarity=0.285 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhcc
Q 010305 406 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (513)
Q Consensus 406 g~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~ 439 (513)
.+.++|++|+++|++++++|+.+......+++.+
T Consensus 19 ~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~l 52 (225)
T TIGR02461 19 PAREALEELKDLGFPIVFVSSKTRAEQEYYREEL 52 (225)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc
Confidence 4566777777788888888888777666666666
No 191
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.84 E-value=0.0022 Score=63.57 Aligned_cols=35 Identities=9% Similarity=-0.073 Sum_probs=27.9
Q ss_pred HHHHHHHcCC---CCCCcEEEEecChhhHHHHHHcCCcE
Q 010305 465 YVEITNSLGV---DKPSEILFVTDVYQEATAAKAAGKEL 500 (513)
Q Consensus 465 ~~~~l~~l~~---~~p~~~l~VGDs~~Di~aA~~aG~~~ 500 (513)
...+++.+|+ + +++++.|||+.||++.-+.+|...
T Consensus 192 l~~l~~~lgi~~~~-~~~viafGDs~NDi~Ml~~ag~gv 229 (271)
T PRK03669 192 ANWLIATYQQLSGT-RPTTLGLGDGPNDAPLLDVMDYAV 229 (271)
T ss_pred HHHHHHHHHhhcCC-CceEEEEcCCHHHHHHHHhCCEEE
Confidence 4455666778 7 889999999999999999988653
No 192
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=96.83 E-value=0.004 Score=63.37 Aligned_cols=84 Identities=13% Similarity=0.093 Sum_probs=52.0
Q ss_pred cCCCHHHHHHHHHHC----CCeEEEEeCch---HH-HHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCC
Q 010305 403 VFDDVPEALEKWHSL----GTKVYIYSSGS---RL-AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGV 474 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~----G~~l~i~Tn~~---~~-~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~ 474 (513)
++|++.++|+.|+.+ |++..++||+. .. ..+.+.+.+ |+.---+.++... . .....++++
T Consensus 17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~l---G~~~~~~~i~~s~------~-~~~~ll~~~-- 84 (321)
T TIGR01456 17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLL---GVDVSPLQVIQSH------S-PYKSLVNKY-- 84 (321)
T ss_pred ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHc---CCCCCHHHHHhhh------H-HHHHHHHHc--
Confidence 457888888888888 99999999996 33 344444667 6542222333211 1 223344443
Q ss_pred CCCCcEEEEecChhhHHHHHHcCCcEE
Q 010305 475 DKPSEILFVTDVYQEATAAKAAGKELF 501 (513)
Q Consensus 475 ~~p~~~l~VGDs~~Di~aA~~aG~~~i 501 (513)
. . .+++||.+- -.+.+..+|+..+
T Consensus 85 ~-~-~v~viG~~~-~~~~l~~~G~~~v 108 (321)
T TIGR01456 85 E-K-RILAVGTGS-VRGVAEGYGFQNV 108 (321)
T ss_pred C-C-ceEEEeChH-HHHHHHHcCCccc
Confidence 2 2 578888754 4666778887765
No 193
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=96.71 E-value=0.016 Score=51.97 Aligned_cols=93 Identities=16% Similarity=0.163 Sum_probs=64.4
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCc-ccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEE
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDL-RKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl-~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l 481 (513)
+-.++...|..|+++ .+++-+|....+..+.--..+ .. .-.+|.+.-.....| ..+.+..+++ +
T Consensus 73 ~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l---~~q~ih~~~l~i~g~h~K------V~~vrth~id-----l 137 (194)
T COG5663 73 LAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWL---FIQNIHYDHLEIVGLHHK------VEAVRTHNID-----L 137 (194)
T ss_pred HHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHH---HHhccchhhhhhhccccc------chhhHhhccC-----c
Confidence 446889999999987 678888988777665544433 11 122343331112223 3467777887 8
Q ss_pred EEecCh-hhHHHHHHcCCcEEEEecCCCCc
Q 010305 482 FVTDVY-QEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 482 ~VGDs~-~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
|++|+. +-++.|+++|++.+.+..-|+..
T Consensus 138 f~ed~~~na~~iAk~~~~~vilins~ynRk 167 (194)
T COG5663 138 FFEDSHDNAGQIAKNAGIPVILINSPYNRK 167 (194)
T ss_pred cccccCchHHHHHHhcCCcEEEecCccccc
Confidence 999999 78899999999999999877643
No 194
>PTZ00174 phosphomannomutase; Provisional
Probab=96.67 E-value=0.0037 Score=61.14 Aligned_cols=28 Identities=14% Similarity=-0.043 Sum_probs=22.0
Q ss_pred CCcEEEEec----ChhhHHHHHHcCCcEEEEe
Q 010305 477 PSEILFVTD----VYQEATAAKAAGKELFVIL 504 (513)
Q Consensus 477 p~~~l~VGD----s~~Di~aA~~aG~~~i~v~ 504 (513)
+++++.||| +.||++.-+.++..++.|.
T Consensus 200 ~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 200 FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 458888888 7888888888777767665
No 195
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=96.66 E-value=0.0067 Score=61.31 Aligned_cols=94 Identities=18% Similarity=0.238 Sum_probs=65.0
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHH--------HH----HHHHhccCCCCcccccceee--ecccCCCCCHHHHHH
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRL--------AQ----RLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVE 467 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~--------~~----~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~ 467 (513)
.+||.+..=|+.|.+.||+++|.||+... .. +.+...+ ++. |.... .....+||...|+..
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl---~vP--i~~~~A~~~~~yRKP~tGMwe~ 178 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANL---GVP--IQLLAAIIKGKYRKPSTGMWEF 178 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhc---CCc--eEEeeeccCCcccCcchhHHHH
Confidence 47888889999999999999999998522 22 2233323 222 22222 224678999999999
Q ss_pred HHHHcC----CCCCCcEEEEecC---------------hhhHHHHHHcCCcEE
Q 010305 468 ITNSLG----VDKPSEILFVTDV---------------YQEATAAKAAGKELF 501 (513)
Q Consensus 468 ~l~~l~----~~~p~~~l~VGDs---------------~~Di~aA~~aG~~~i 501 (513)
..+.++ +. -..++||||- ..|+..|.++|+...
T Consensus 179 ~~~~~nd~~~Is-ek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 179 LKRLENDSVEIS-EKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred HHHHhhccceee-echhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 987765 33 4566788873 358899999998754
No 196
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.45 E-value=0.0082 Score=66.62 Aligned_cols=87 Identities=13% Similarity=0.192 Sum_probs=68.2
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEE
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l 481 (513)
++.||+.+.++.|++.|+++.++|+.+...+..+.+.+ |+.++|- ..+| +-=..+.+++.-. ...+.
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~l---GI~~v~a-------~~~P--edK~~~v~~lq~~-g~~Va 512 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA---GVDDFIA-------EATP--EDKIALIRQEQAE-GKLVA 512 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCEEEc-------CCCH--HHHHHHHHHHHHc-CCeEE
Confidence 78899999999999999999999999999999999999 8864332 1233 2223344444433 56799
Q ss_pred EEecChhhHHHHHHcCCcEE
Q 010305 482 FVTDVYQEATAAKAAGKELF 501 (513)
Q Consensus 482 ~VGDs~~Di~aA~~aG~~~i 501 (513)
|+||..+|..+-++|++...
T Consensus 513 mvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 513 MTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred EECCCcchHHHHHhCCEeEE
Confidence 99999999999999987643
No 197
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=96.39 E-value=0.012 Score=55.98 Aligned_cols=88 Identities=14% Similarity=0.106 Sum_probs=55.9
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHH-HHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCc
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 479 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~-~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~ 479 (513)
..+.||+.++|++..++|..++-+||...+. ....++.+...|+....+..+---...|++..-+..+.+- -+=
T Consensus 121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~-----~~i 195 (274)
T COG2503 121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEKD-----YKI 195 (274)
T ss_pred cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhhc-----cce
Confidence 3689999999999999999999999998776 3333333322266543333221112234444444444442 346
Q ss_pred EEEEecChhhHHHH
Q 010305 480 ILFVTDVYQEATAA 493 (513)
Q Consensus 480 ~l~VGDs~~Di~aA 493 (513)
+++|||+..|....
T Consensus 196 Vm~vGDNl~DF~d~ 209 (274)
T COG2503 196 VMLVGDNLDDFGDN 209 (274)
T ss_pred eeEecCchhhhcch
Confidence 79999999876543
No 198
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=96.27 E-value=0.007 Score=60.12 Aligned_cols=101 Identities=11% Similarity=0.050 Sum_probs=73.5
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee-e-c-----ccCCCCC--------HHH---
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-D-T-----AVGNKRE--------TPS--- 464 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~-~-~-----~~~~KP~--------p~~--- 464 (513)
--|.+..+|+.|+++|.+++++||+|-.++..-++.+-...+.++||.++ . + ....+|- .-.
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdk 320 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDK 320 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhh
Confidence 34788899999999999999999999999999988887778999999887 1 1 1111221 011
Q ss_pred --------------HHHHHHHcCCCCCCcEEEEecCh-hhHHHHH-HcCCcEEEEe
Q 010305 465 --------------YVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGKELFVIL 504 (513)
Q Consensus 465 --------------~~~~l~~l~~~~p~~~l~VGDs~-~Di~aA~-~aG~~~i~v~ 504 (513)
+...++--|.. ..+++|+||.+ +|+..-. +.|++|-++.
T Consensus 321 v~klekgkiYy~G~l~~flelt~Wr-G~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 321 VDKLEKGKIYYQGNLKSFLELTGWR-GPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred hhhcccCceeeeccHHHHHHHhccC-CCeeEEecCcchhhhhhhHhhcccccccch
Confidence 11223333454 66899999999 7987766 8899876653
No 199
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=96.26 E-value=0.0074 Score=58.12 Aligned_cols=37 Identities=19% Similarity=0.322 Sum_probs=29.4
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcE
Q 010305 463 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKEL 500 (513)
Q Consensus 463 ~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~ 500 (513)
.....+++.+|++ +++++.|||+.+|+..-+.+|...
T Consensus 189 ~ai~~l~~~~~i~-~~~~~~~GD~~ND~~Ml~~~~~~~ 225 (254)
T PF08282_consen 189 SAIKYLLEYLGIS-PEDIIAFGDSENDIEMLELAGYSV 225 (254)
T ss_dssp HHHHHHHHHHTTS-GGGEEEEESSGGGHHHHHHSSEEE
T ss_pred HHHHHHhhhcccc-cceeEEeecccccHhHHhhcCeEE
Confidence 4455566667887 899999999999999999998763
No 200
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.20 E-value=0.015 Score=64.53 Aligned_cols=85 Identities=12% Similarity=0.189 Sum_probs=68.5
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEE
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l 481 (513)
++.||+.+.+++||+.|+++.++|+-+...+..+-+.+ |+.++|-. .+ |+-=.++.+.++-. -+-+.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~el---GI~~v~A~-------~~--PedK~~iV~~lQ~~-G~~Va 507 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEA---GVDRFVAE-------CK--PEDKINVIREEQAK-GHIVA 507 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCceEEcC-------CC--HHHHHHHHHHHHhC-CCEEE
Confidence 78999999999999999999999999999999999999 88653322 23 33344555555544 55689
Q ss_pred EEecChhhHHHHHHcCCc
Q 010305 482 FVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 482 ~VGDs~~Di~aA~~aG~~ 499 (513)
|+||..||..+=++|.+.
T Consensus 508 MtGDGvNDAPALa~ADVG 525 (673)
T PRK14010 508 MTGDGTNDAPALAEANVG 525 (673)
T ss_pred EECCChhhHHHHHhCCEE
Confidence 999999999999999764
No 201
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=96.14 E-value=0.2 Score=53.96 Aligned_cols=88 Identities=14% Similarity=0.101 Sum_probs=51.9
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhc-cCCCCcccc--------cceee-ecccCCCC--CHHHHHHHHH
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN-SNYGDLRKY--------LSGFF-DTAVGNKR--ETPSYVEITN 470 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~-~~~~gl~~~--------fd~i~-~~~~~~KP--~p~~~~~~l~ 470 (513)
++|.+.+.+ +++|.. +|+|.++...++.+.+. + |++.. .++.+ +......+ -.+-...+.+
T Consensus 111 l~~~a~~~~---~~~g~~-vvVSASp~~~Vepfa~~~L---Gid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~ 183 (497)
T PLN02177 111 VHPETWRVF---NSFGKR-YIITASPRIMVEPFVKTFL---GADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLK 183 (497)
T ss_pred cCHHHHHHH---HhCCCE-EEEECCcHHHHHHHHHHcC---CCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHH
Confidence 556655544 567754 99999999999999965 5 54321 12222 11111001 1122333445
Q ss_pred HcCCCCCCcEEEEecChhhHHHHHHcCCc
Q 010305 471 SLGVDKPSEILFVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 471 ~l~~~~p~~~l~VGDs~~Di~aA~~aG~~ 499 (513)
.++.+ ... +..|||.+|...-..++-.
T Consensus 184 ~~g~~-~~~-~aYgDS~sD~plL~~a~e~ 210 (497)
T PLN02177 184 EFGDA-LPD-LGLGDRETDHDFMSICKEG 210 (497)
T ss_pred HhCCC-Cce-EEEECCccHHHHHHhCCcc
Confidence 56654 334 8999999999988877754
No 202
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=96.11 E-value=0.01 Score=58.29 Aligned_cols=35 Identities=3% Similarity=-0.009 Sum_probs=23.6
Q ss_pred HHHHHHcCCCC--CCcEEEEecChhhHHHHHHcCCcEE
Q 010305 466 VEITNSLGVDK--PSEILFVTDVYQEATAAKAAGKELF 501 (513)
Q Consensus 466 ~~~l~~l~~~~--p~~~l~VGDs~~Di~aA~~aG~~~i 501 (513)
..+++.+++ + ++++++|||+.+|+...+.+|...+
T Consensus 182 ~~l~~~~~i-~~~~~~~~a~GD~~ND~~Ml~~ag~~va 218 (256)
T TIGR01486 182 NALKQFYNQ-PGGAIKVVGLGDSPNDLPLLEVVDLAVV 218 (256)
T ss_pred HHHHHHHhh-cCCCceEEEEcCCHhhHHHHHHCCEEEE
Confidence 334444554 3 6778888888888888888876633
No 203
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=96.11 E-value=0.022 Score=55.66 Aligned_cols=81 Identities=17% Similarity=0.147 Sum_probs=62.4
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeec------c--c-------------------
Q 010305 404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT------A--V------------------- 456 (513)
Q Consensus 404 ~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~------~--~------------------- 456 (513)
.|.+.+.|..|++.|..+++-|.++++.+...++.+ +|.++||.++.. . .
T Consensus 144 ~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~---~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylD 220 (297)
T PF05152_consen 144 DPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKEL---KLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLD 220 (297)
T ss_pred ChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHh---CCccccEEEEeCCccCCcCCccceeecccceEEeccceEEe
Confidence 367778899999999999999999999999999999 999999998811 0 0
Q ss_pred --C---CCCCHHHHHHHHHHcCCCCCCcEEEEecCh
Q 010305 457 --G---NKRETPSYVEITNSLGVDKPSEILFVTDVY 487 (513)
Q Consensus 457 --~---~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~ 487 (513)
. --.+|...+..+++.|+.--..+-.|+|-.
T Consensus 221 v~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~ 256 (297)
T PF05152_consen 221 VTNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 256 (297)
T ss_pred CCcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCc
Confidence 0 112678888889998886223445666655
No 204
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.10 E-value=0.012 Score=64.55 Aligned_cols=33 Identities=15% Similarity=0.016 Sum_probs=25.4
Q ss_pred HHHHHHHHHHCCCeEEEEeCchHHHHHHHHhcc
Q 010305 407 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (513)
Q Consensus 407 ~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~ 439 (513)
..++|+.|+++|++++++|+.+...+..+.+.+
T Consensus 438 t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~L 470 (694)
T PRK14502 438 ALDALRLLKDKELPLVFCSAKTMGEQDLYRNEL 470 (694)
T ss_pred HHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc
Confidence 345677778888888888888887777777776
No 205
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.06 E-value=0.011 Score=51.40 Aligned_cols=29 Identities=28% Similarity=0.282 Sum_probs=24.3
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHH
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLA 431 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~ 431 (513)
+.+++.+.|+.|+++|+.++++|..+...
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 55688889999999999999999887553
No 206
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.04 E-value=0.017 Score=64.35 Aligned_cols=85 Identities=24% Similarity=0.250 Sum_probs=66.6
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEE
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l 481 (513)
.+.|++.++++.||++|+++.++|+-++..++.+-+.+ |+.+++-. -+|+ ==..+.+++.-. -..+.
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~l---GId~v~Ae-------llPe--dK~~~V~~l~~~-g~~Va 603 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL---GIDEVRAE-------LLPE--DKAEIVRELQAE-GRKVA 603 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---ChHhhecc-------CCcH--HHHHHHHHHHhc-CCEEE
Confidence 78999999999999999999999999999999999999 88654333 2332 223455555543 56899
Q ss_pred EEecChhhHHHHHHcCCc
Q 010305 482 FVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 482 ~VGDs~~Di~aA~~aG~~ 499 (513)
||||..||..+=.+|-+.
T Consensus 604 mVGDGINDAPALA~AdVG 621 (713)
T COG2217 604 MVGDGINDAPALAAADVG 621 (713)
T ss_pred EEeCCchhHHHHhhcCee
Confidence 999999999887777544
No 207
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.00 E-value=0.019 Score=63.81 Aligned_cols=85 Identities=13% Similarity=0.173 Sum_probs=67.4
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEE
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l 481 (513)
++.||+.+.+++||+.|+++.++|+-+...++.+-+.+ |+.++|-. .+ |+-=..+.++++-. -+-+.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el---GId~v~A~-------~~--PedK~~iV~~lQ~~-G~~Va 511 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA---GVDDFLAE-------AT--PEDKLALIRQEQAE-GRLVA 511 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCcEEEcc-------CC--HHHHHHHHHHHHHc-CCeEE
Confidence 67899999999999999999999999999999999999 88653221 22 33334455555544 55689
Q ss_pred EEecChhhHHHHHHcCCc
Q 010305 482 FVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 482 ~VGDs~~Di~aA~~aG~~ 499 (513)
|+||..||..+-++|.+.
T Consensus 512 MtGDGvNDAPALa~ADVG 529 (679)
T PRK01122 512 MTGDGTNDAPALAQADVG 529 (679)
T ss_pred EECCCcchHHHHHhCCEe
Confidence 999999999999999765
No 208
>PLN02423 phosphomannomutase
Probab=95.92 E-value=0.045 Score=53.42 Aligned_cols=35 Identities=17% Similarity=0.046 Sum_probs=29.0
Q ss_pred HHHHcCCCCCCcEEEEec----ChhhHHHHHHcCCcEEEEe
Q 010305 468 ITNSLGVDKPSEILFVTD----VYQEATAAKAAGKELFVIL 504 (513)
Q Consensus 468 ~l~~l~~~~p~~~l~VGD----s~~Di~aA~~aG~~~i~v~ 504 (513)
+++.+. + +++++.+|| ..||++.-+.-|+.++-|+
T Consensus 193 al~~L~-~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 193 CLQFLE-D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred HHHHhc-C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 333333 6 999999999 6999999998899999886
No 209
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=95.78 E-value=0.08 Score=47.68 Aligned_cols=96 Identities=11% Similarity=0.041 Sum_probs=56.3
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHH---HHHHHhccCCCCcccccceee--e--c------ccCCCCCHHHHHH-H
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGNSNYGDLRKYLSGFF--D--T------AVGNKRETPSYVE-I 468 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~---~~~~l~~~~~~gl~~~fd~i~--~--~------~~~~KP~p~~~~~-~ 468 (513)
..||+.++...++++||++.-+|+.+... .+..|......+. .+=++.+ . . ...-.++|+.|.. +
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~-~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~~~ 106 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGH-NLPDGPVLLSPDSLFSALHREVISKDPEEFKIAC 106 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCc-cCCCCCEEECCcchhhhhhccccccChHHHHHHH
Confidence 45899999999999999999999998543 3334443211111 1111111 1 0 1122446666664 3
Q ss_pred HHHc-CCCC-CCcEE--EEecChhhHHHHHHcCCc
Q 010305 469 TNSL-GVDK-PSEIL--FVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 469 l~~l-~~~~-p~~~l--~VGDs~~Di~aA~~aG~~ 499 (513)
|+.+ ..=| ...-+ -.|++.+|+.+=+++|+.
T Consensus 107 L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 107 LRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 3333 1100 12223 358999999999999997
No 210
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=95.62 E-value=0.019 Score=65.21 Aligned_cols=94 Identities=17% Similarity=0.078 Sum_probs=69.7
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccccc--------------------ceee-ecccCCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--------------------SGFF-DTAVGNKR 460 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~f--------------------d~i~-~~~~~~KP 460 (513)
++.|++.++++.|++.|+++.++|+-+...++.+.+.+ |+.+.. +.++ +.....+=
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l---GI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL---GLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 78999999999999999999999999999999999999 885410 0000 00012222
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCc
Q 010305 461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 461 ~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~ 499 (513)
.|+-=..+.+.++-. .+-+.|+||..||..+-++|.+.
T Consensus 519 ~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~AdVG 556 (755)
T TIGR01647 519 FPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKADVG 556 (755)
T ss_pred CHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCCee
Confidence 344444555555554 66799999999999999999876
No 211
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=95.52 E-value=0.081 Score=49.63 Aligned_cols=88 Identities=13% Similarity=0.021 Sum_probs=56.1
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccc--cc--eeeecc----------c--CCCCCHHHHH
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY--LS--GFFDTA----------V--GNKRETPSYV 466 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~--fd--~i~~~~----------~--~~KP~p~~~~ 466 (513)
..|++.++|+.+.+ .|.++|.|.++...+..+++.+ ++... +. .+.+.. + ..|+ +.
T Consensus 46 kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l---~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd----L~ 117 (195)
T TIGR02245 46 MRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTEL---GVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP----LG 117 (195)
T ss_pred eCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHh---cccCCccceEEEEeccccceeeEeeccCcEEEee----cH
Confidence 56999999999998 4999999999999999999877 43211 11 111111 1 1233 12
Q ss_pred HHHHHcC--CCCCCcEEEEecChhhHHHHHHcCCc
Q 010305 467 EITNSLG--VDKPSEILFVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 467 ~~l~~l~--~~~p~~~l~VGDs~~Di~aA~~aG~~ 499 (513)
.+-++++ .+ .+++++|+|++.-...--..|+.
T Consensus 118 ~lw~~l~~~~~-~~ntiiVDd~p~~~~~~P~N~i~ 151 (195)
T TIGR02245 118 VIWALLPEFYS-MKNTIMFDDLRRNFLMNPQNGLK 151 (195)
T ss_pred HhhhhcccCCC-cccEEEEeCCHHHHhcCCCCccc
Confidence 2223444 25 78999999999654433333443
No 212
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.42 E-value=0.079 Score=49.78 Aligned_cols=97 Identities=16% Similarity=0.069 Sum_probs=47.9
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccc----eeeecccCCCC-CHHHHHHHHHHcCCCCCC
Q 010305 404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS----GFFDTAVGNKR-ETPSYVEITNSLGVDKPS 478 (513)
Q Consensus 404 ~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd----~i~~~~~~~KP-~p~~~~~~l~~l~~~~p~ 478 (513)
.|--...|..+++. ...|++-++.........++.+.|+.--.- .+.+.. ..|- .....+..-++++ +.
T Consensus 136 lpre~aaLa~~rEy--seti~~rs~d~~~~~~~~~L~e~glt~v~garf~~v~~as-~gKg~Aa~~ll~~y~rl~---~~ 209 (274)
T COG3769 136 LPREQAALAMLREY--SETIIWRSSDERMAQFTARLNERGLTFVHGARFWHVLDAS-AGKGQAANWLLETYRRLG---GA 209 (274)
T ss_pred CChHHhHHHHHHHh--hhheeecccchHHHHHHHHHHhcCceEEeccceEEEeccc-cCccHHHHHHHHHHHhcC---ce
Confidence 34455677777774 445555444332222222222225542221 222222 2232 2333333444444 34
Q ss_pred c-EEEEecChhhHHHHHHcCCcEEEEecCCC
Q 010305 479 E-ILFVTDVYQEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 479 ~-~l~VGDs~~Di~aA~~aG~~~i~v~~G~~ 508 (513)
+ ++-+||+++|+. -...++..+.|. |++
T Consensus 210 r~t~~~GDg~nD~P-l~ev~d~AfiV~-~ln 238 (274)
T COG3769 210 RTTLGLGDGPNDAP-LLEVMDYAFIVK-GLN 238 (274)
T ss_pred eEEEecCCCCCccc-HHHhhhhheeec-ccc
Confidence 5 899999999984 456666666654 443
No 213
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.22 E-value=0.13 Score=51.14 Aligned_cols=87 Identities=17% Similarity=0.234 Sum_probs=57.5
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 478 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~---~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~ 478 (513)
.++||+.++|+.|+++|++++++||++ +......++.+ |+....+.++. ........+++.... +.
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~---G~~~~~~~i~t-------s~~~~~~~l~~~~~~-~~ 86 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARL---GFNGLAEQLFS-------SALCAARLLRQPPDA-PK 86 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc---CCCCChhhEec-------HHHHHHHHHHhhCcC-CC
Confidence 489999999999999999999999965 33333556666 66543334432 123344555554443 67
Q ss_pred cEEEEecChhhHHHHHHcCCcE
Q 010305 479 EILFVTDVYQEATAAKAAGKEL 500 (513)
Q Consensus 479 ~~l~VGDs~~Di~aA~~aG~~~ 500 (513)
++++||+.. ..+..+..|+..
T Consensus 87 ~v~~iG~~~-~~~~l~~~g~~~ 107 (279)
T TIGR01452 87 AVYVIGEEG-LRAELDAAGIRL 107 (279)
T ss_pred EEEEEcCHH-HHHHHHHCCCEE
Confidence 899999853 344556677764
No 214
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=95.22 E-value=0.032 Score=52.50 Aligned_cols=44 Identities=16% Similarity=0.144 Sum_probs=39.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEE
Q 010305 457 GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELF 501 (513)
Q Consensus 457 ~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i 501 (513)
...+++..+..++++++++ ++++++|||+.+|+..++.+|+..+
T Consensus 160 ~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 160 AGVDKGSALQALLKELNGK-RDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCCceE
Confidence 3467889999999999997 9999999999999999999998753
No 215
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=95.22 E-value=0.074 Score=52.42 Aligned_cols=38 Identities=21% Similarity=0.297 Sum_probs=31.3
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhcc
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~ 439 (513)
.+.||+.++++.|++.|.++.++||++....+...+++
T Consensus 38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~ 75 (306)
T KOG2882|consen 38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKF 75 (306)
T ss_pred CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHH
Confidence 47899999999999999999999999866555555433
No 216
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=95.07 E-value=0.033 Score=64.42 Aligned_cols=92 Identities=18% Similarity=0.152 Sum_probs=69.0
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee-e-----------------cccCCCCCHH
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-D-----------------TAVGNKRETP 463 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~-~-----------------~~~~~KP~p~ 463 (513)
++.|++.++++.|+++|+++.++|+-+...+..+.+.+ |+.. +.++ + .....+-.|+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l---GI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe 624 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEV---GLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPM 624 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHH
Confidence 68899999999999999999999999999999999999 8852 1121 0 0112223444
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCc
Q 010305 464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 464 ~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~ 499 (513)
-=.++.+.++-. .+-+.|+||..||..+-++|.+.
T Consensus 625 ~K~~IV~~Lq~~-G~vVam~GDGvNDaPALk~ADVG 659 (902)
T PRK10517 625 HKERIVTLLKRE-GHVVGFMGDGINDAPALRAADIG 659 (902)
T ss_pred HHHHHHHHHHHC-CCEEEEECCCcchHHHHHhCCEE
Confidence 445555555544 56789999999999999999765
No 217
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=95.03 E-value=0.037 Score=52.11 Aligned_cols=12 Identities=25% Similarity=0.509 Sum_probs=7.7
Q ss_pred EEEccccccccc
Q 010305 287 IVLDIEGTTTPI 298 (513)
Q Consensus 287 vlFDlDGTL~d~ 298 (513)
|+||+||||++.
T Consensus 2 i~~D~DgTL~~~ 13 (204)
T TIGR01484 2 LFFDLDGTLLDP 13 (204)
T ss_pred EEEeCcCCCcCC
Confidence 566777777653
No 218
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=94.91 E-value=0.049 Score=62.88 Aligned_cols=93 Identities=14% Similarity=0.156 Sum_probs=68.4
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee-e-c----------------ccCCCCCHH
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-D-T----------------AVGNKRETP 463 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~-~-~----------------~~~~KP~p~ 463 (513)
++.|++.++++.|++.|+++.++|+-+...+..+.+.+ |+.. +.++ . + .....-.|+
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~l---GI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe 589 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEV---GIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPM 589 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHH
Confidence 78999999999999999999999999999999999999 8852 1111 0 0 111122333
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcE
Q 010305 464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKEL 500 (513)
Q Consensus 464 ~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~ 500 (513)
-=.++.+.++-. -+.+.|+||..||..+-++|.+..
T Consensus 590 ~K~~iV~~lq~~-G~vVam~GDGvNDapALk~AdVGI 625 (867)
T TIGR01524 590 QKSRIIGLLKKA-GHTVGFLGDGINDAPALRKADVGI 625 (867)
T ss_pred HHHHHHHHHHhC-CCEEEEECCCcccHHHHHhCCEEE
Confidence 334445555444 567999999999999999998763
No 219
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=94.81 E-value=0.019 Score=51.87 Aligned_cols=81 Identities=23% Similarity=0.259 Sum_probs=55.7
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCc-ccccceee--ecccCCCCCHHHHHHHHHHcCCCCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDL-RKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 478 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl-~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p~ 478 (513)
.+.||+.++|+.|.+. +.++|.|+++...+..+++.+ .- ..+|+.++ +.....+. .+.+-++.++-+ ++
T Consensus 36 ~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~l---dp~~~~~~~~~~r~~~~~~~~---~~~KdL~~l~~~-~~ 107 (159)
T PF03031_consen 36 KLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDAL---DPNGKLFSRRLYRDDCTFDKG---SYIKDLSKLGRD-LD 107 (159)
T ss_dssp EE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHH---TTTTSSEEEEEEGGGSEEETT---EEE--GGGSSS--GG
T ss_pred eeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhh---hhhcccccccccccccccccc---ccccchHHHhhc-cc
Confidence 6889999999999766 999999999999999999988 44 46777777 22221111 112566777776 89
Q ss_pred cEEEEecChhhH
Q 010305 479 EILFVTDVYQEA 490 (513)
Q Consensus 479 ~~l~VGDs~~Di 490 (513)
++++|+|++.-.
T Consensus 108 ~vvivDD~~~~~ 119 (159)
T PF03031_consen 108 NVVIVDDSPRKW 119 (159)
T ss_dssp GEEEEES-GGGG
T ss_pred cEEEEeCCHHHe
Confidence 999999998643
No 220
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=94.75 E-value=0.045 Score=63.41 Aligned_cols=92 Identities=14% Similarity=0.136 Sum_probs=69.2
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee------------------ecccCCCCCHH
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------------DTAVGNKRETP 463 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~------------------~~~~~~KP~p~ 463 (513)
++.|++.++++.|+++|+++.++|+-+...+..+.+.+ |+.. +.++ .......-.|+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~l---GI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe 624 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREV---GLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPL 624 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHH
Confidence 78899999999999999999999999999999999999 8852 1111 00112222444
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCc
Q 010305 464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 464 ~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~ 499 (513)
-=.++.+.++-. -+-+.|+||..||..+=++|.+.
T Consensus 625 ~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVG 659 (903)
T PRK15122 625 QKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVG 659 (903)
T ss_pred HHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEE
Confidence 445555555544 56799999999999999999876
No 221
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=94.72 E-value=0.055 Score=63.12 Aligned_cols=94 Identities=15% Similarity=0.040 Sum_probs=67.6
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee-----------------e-cccCCCCCHH
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-----------------D-TAVGNKRETP 463 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~-----------------~-~~~~~KP~p~ 463 (513)
++.|++.++++.|+++|+++.++|+-+...+..+-+.+ |+.+-=..++ . ......=.|+
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~---GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe 655 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNC---GILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPL 655 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc---CCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHH
Confidence 78899999999999999999999999999999999999 8752111111 0 0111222333
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCc
Q 010305 464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 464 ~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~ 499 (513)
-=..+.+.++-. -+-+.|+||..||..+=++|.+.
T Consensus 656 ~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVG 690 (941)
T TIGR01517 656 DKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVG 690 (941)
T ss_pred HHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcc
Confidence 334445554443 55799999999999999998765
No 222
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=94.66 E-value=0.066 Score=52.97 Aligned_cols=41 Identities=12% Similarity=0.098 Sum_probs=29.2
Q ss_pred HHHHHHHcCCCCCCcEEEEecChhhHHHHHHc---CCcEEEEecC
Q 010305 465 YVEITNSLGVDKPSEILFVTDVYQEATAAKAA---GKELFVILDG 506 (513)
Q Consensus 465 ~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~a---G~~~i~v~~G 506 (513)
..++++.+++. .++++++||+.+|+.+-+.+ +-.+|.|..+
T Consensus 179 l~~ll~~~~~~-~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a 222 (266)
T PRK10187 179 IAAFMQEAPFA-GRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG 222 (266)
T ss_pred HHHHHHhcCCC-CCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC
Confidence 33455566665 78999999999998887777 4455666444
No 223
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=94.40 E-value=0.054 Score=52.80 Aligned_cols=45 Identities=11% Similarity=-0.038 Sum_probs=40.1
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHc-------CCcEEEEecCC
Q 010305 462 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA-------GKELFVILDGW 507 (513)
Q Consensus 462 p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~a-------G~~~i~v~~G~ 507 (513)
...+..++++++.. +.+++||||+.+|+.+++.+ |..++.|.+|-
T Consensus 169 g~a~~~~~~~~~~~-~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~ 220 (244)
T TIGR00685 169 GEIVKRLLWHQPGS-GISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS 220 (244)
T ss_pred HHHHHHHHHhcccC-CCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC
Confidence 58899999999997 99999999999999999999 77788887664
No 224
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=94.37 E-value=0.089 Score=61.91 Aligned_cols=95 Identities=14% Similarity=0.096 Sum_probs=69.5
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccccc---------c-eee-ec----------------
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL---------S-GFF-DT---------------- 454 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~f---------d-~i~-~~---------------- 454 (513)
++.|++.++++.|+++|+++.++|+-....+..+.+.+ |+.+.. + .++ +.
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~---Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~ 722 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEV---GIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKAL 722 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc---CCCCccccccccccccceeeehHHhhhcCHHHHHHHhhc
Confidence 78999999999999999999999999999999999999 875310 1 111 00
Q ss_pred -ccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcE
Q 010305 455 -AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKEL 500 (513)
Q Consensus 455 -~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~ 500 (513)
.....=.|+-=..+.+.++-. .+.+.|+||..+|..+-++|.+..
T Consensus 723 ~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGI 768 (1053)
T TIGR01523 723 CLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGI 768 (1053)
T ss_pred CeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccE
Confidence 011222344444455555544 567899999999999999997763
No 225
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=94.31 E-value=0.048 Score=52.71 Aligned_cols=52 Identities=12% Similarity=0.075 Sum_probs=42.8
Q ss_pred ecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecC
Q 010305 453 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 453 ~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G 506 (513)
+.....++++..+..++++++++ ++++++|||+.+|+.+.+.+|... .+.++
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~-~~~~i~~GD~~nD~~ml~~~~~~i-av~na 203 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLP-LEQILVAGDSGNDEEMLRGLTLGV-VVGNH 203 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCC-HHHEEEEcCCccHHHHHcCCCcEE-EEcCC
Confidence 33555678899999999999997 999999999999999999987553 44443
No 226
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=94.05 E-value=0.21 Score=54.08 Aligned_cols=82 Identities=17% Similarity=0.237 Sum_probs=65.5
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEE
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l 481 (513)
++.|++.++++.|++.|+++.++|..+......+-+.+ |+ + ..-.|+--..+.+++.-. ...+.
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~l---gi-------~-----~~~~p~~K~~~v~~l~~~-g~~v~ 410 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKEL---GI-------F-----ARVTPEEKAALVEALQKK-GRVVA 410 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---Cc-------e-----eccCHHHHHHHHHHHHHC-CCEEE
Confidence 78999999999999999999999999999999999888 65 1 112344444555555443 56799
Q ss_pred EEecChhhHHHHHHcCCc
Q 010305 482 FVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 482 ~VGDs~~Di~aA~~aG~~ 499 (513)
||||..+|..+-+.|++.
T Consensus 411 ~vGDg~nD~~al~~Advg 428 (499)
T TIGR01494 411 MTGDGVNDAPALKKADVG 428 (499)
T ss_pred EECCChhhHHHHHhCCCc
Confidence 999999999999888754
No 227
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.04 E-value=0.15 Score=57.21 Aligned_cols=85 Identities=19% Similarity=0.214 Sum_probs=64.6
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEE
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l 481 (513)
++.||+..++..||+.|++++++|+-+...++..-+.. | ++.++.+ .+|.- =....+++.-+ ...+.
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V---G----i~~V~ae---v~P~~--K~~~Ik~lq~~-~~~Va 789 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV---G----IDNVYAE---VLPEQ--KAEKIKEIQKN-GGPVA 789 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh---C----cceEEec---cCchh--hHHHHHHHHhc-CCcEE
Confidence 67899999999999999999999999999999999988 7 5677743 23321 12234444443 56789
Q ss_pred EEecChhhHHHHHHcCCc
Q 010305 482 FVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 482 ~VGDs~~Di~aA~~aG~~ 499 (513)
||||..||-.+-.+|.+.
T Consensus 790 MVGDGINDaPALA~AdVG 807 (951)
T KOG0207|consen 790 MVGDGINDAPALAQADVG 807 (951)
T ss_pred EEeCCCCccHHHHhhccc
Confidence 999999998776666554
No 228
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.75 E-value=0.49 Score=41.95 Aligned_cols=95 Identities=15% Similarity=0.222 Sum_probs=59.7
Q ss_pred cCCCHHHHHHHHHHC-C-CeEEEEeCchHH--------HHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHc
Q 010305 403 VFDDVPEALEKWHSL-G-TKVYIYSSGSRL--------AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSL 472 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~-G-~~l~i~Tn~~~~--------~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l 472 (513)
++|...+-++++++. | .-++|+||+... .++.+.+.. |+. ++ ...+.+|..-.+..+.+
T Consensus 62 Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~---gIp-----Vl---RHs~kKP~ct~E~~~y~ 130 (190)
T KOG2961|consen 62 IWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKI---GIP-----VL---RHSVKKPACTAEEVEYH 130 (190)
T ss_pred cCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhh---CCc-----eE---eecccCCCccHHHHHHH
Confidence 567777777777764 3 568999997422 233333333 331 11 11223333333333332
Q ss_pred -C---CCCCCcEEEEecCh-hhHHHHHHcCCcEEEEecCCC
Q 010305 473 -G---VDKPSEILFVTDVY-QEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 473 -~---~~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~G~~ 508 (513)
+ +..+++++||||++ .||--|...|.-+||..-|-.
T Consensus 131 ~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~ 171 (190)
T KOG2961|consen 131 FGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR 171 (190)
T ss_pred hCCcccCChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence 3 22389999999999 899999999999999987743
No 229
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=92.71 E-value=0.19 Score=59.03 Aligned_cols=95 Identities=16% Similarity=0.124 Sum_probs=67.9
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccc------------------------eeee-c--
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS------------------------GFFD-T-- 454 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd------------------------~i~~-~-- 454 (513)
++.|++.++|++|+++|+++.++|+.+...+..+.+.+ |+.+--. .+++ .
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~---gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l 644 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV---GIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDL 644 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCCCCCccchhhhhhhccccccccccccccceEEEhHHh
Confidence 67899999999999999999999999999999999888 6632100 1110 0
Q ss_pred -----------------ccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcE
Q 010305 455 -----------------AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKEL 500 (513)
Q Consensus 455 -----------------~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~ 500 (513)
....+-.|+-=..+.+.++-. ..-+.|+||..+|+.+-++|.+..
T Consensus 645 ~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGi 706 (997)
T TIGR01106 645 KDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGV 706 (997)
T ss_pred hhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcce
Confidence 012233444444455555443 456899999999999999987653
No 230
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=92.51 E-value=0.35 Score=50.15 Aligned_cols=98 Identities=12% Similarity=0.084 Sum_probs=79.9
Q ss_pred ccCCCH--HHHHHHHHHCCCeEEEEeCc--hHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCC
Q 010305 402 EVFDDV--PEALEKWHSLGTKVYIYSSG--SRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVD 475 (513)
Q Consensus 402 ~~~pg~--~~~L~~L~~~G~~l~i~Tn~--~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~ 475 (513)
.+||.. .++.+.+.+.|.++.++|.. |....+.++..+ |...+=--++ .+....|.+-..|..+++.-+++
T Consensus 97 vLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~---g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd 173 (635)
T COG5610 97 VLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSF---GPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVD 173 (635)
T ss_pred EeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhc---CCCccCceeeecceeehhcccchHHHHHHhhcCCC
Confidence 567655 78999999999999999987 677888888888 6543322244 34556788899999999999998
Q ss_pred CCCcEEEEecCh-hhHHHHHHcCCcEEEE
Q 010305 476 KPSEILFVTDVY-QEATAAKAAGKELFVI 503 (513)
Q Consensus 476 ~p~~~l~VGDs~-~Di~aA~~aG~~~i~v 503 (513)
|...+.+||.. .|+..+++.|+.|...
T Consensus 174 -~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 174 -PKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred -hhheEEecCchhhhhcCccccchhHHHH
Confidence 99999999999 7999999999987653
No 231
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=92.01 E-value=0.2 Score=48.35 Aligned_cols=26 Identities=8% Similarity=-0.110 Sum_probs=20.6
Q ss_pred HHHCCCeEEEEeCchHHHHHHHHhcc
Q 010305 414 WHSLGTKVYIYSSGSRLAQRLIFGNS 439 (513)
Q Consensus 414 L~~~G~~l~i~Tn~~~~~~~~~l~~~ 439 (513)
++++|++++++|+.+...+..+++.+
T Consensus 26 ~~~~gi~~viaTGR~~~~v~~~~~~l 51 (236)
T TIGR02471 26 GSGDAVGFGIATGRSVESAKSRYAKL 51 (236)
T ss_pred hcCCCceEEEEeCCCHHHHHHHHHhC
Confidence 35678888888888888888888777
No 232
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=91.79 E-value=0.62 Score=54.27 Aligned_cols=98 Identities=19% Similarity=0.164 Sum_probs=72.2
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccc--eeee-c-----------------ccCCCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--GFFD-T-----------------AVGNKRE 461 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd--~i~~-~-----------------~~~~KP~ 461 (513)
+|.|+++++++.|+++|+++.++|+-....+..+-+.+ |+...-+ .+++ . ....+=.
T Consensus 547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~---Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvs 623 (917)
T COG0474 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC---GIEAEAESALVIDGAELDALSDEELAELVEELSVFARVS 623 (917)
T ss_pred CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHc---CCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcC
Confidence 78999999999999999999999999999999999999 7654332 1331 1 0122334
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEE
Q 010305 462 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVI 503 (513)
Q Consensus 462 p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 503 (513)
|+-=.++.+.++-. -.-+.|+||..||+-+=++|.+.....
T Consensus 624 P~qK~~IV~~lq~~-g~vVamtGDGvNDapALk~ADVGIamg 664 (917)
T COG0474 624 PEQKARIVEALQKS-GHVVAMTGDGVNDAPALKAADVGIAMG 664 (917)
T ss_pred HHHHHHHHHHHHhC-CCEEEEeCCCchhHHHHHhcCccEEec
Confidence 44444444555444 557999999999999999998775443
No 233
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=91.52 E-value=2.2 Score=41.41 Aligned_cols=91 Identities=14% Similarity=0.151 Sum_probs=52.7
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcc-cccceee------ecc----cCCCCCHHHHHH-
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFF------DTA----VGNKRETPSYVE- 467 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~-~~fd~i~------~~~----~~~KP~p~~~~~- 467 (513)
...+.+|+.++++.|+++++|+.|+|.+-.+.+..++++. +.. +-+ .++ ++. +..-|--..|.+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~---~~~~~Nv-~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn 163 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQA---GVFHPNV-KVVSNFMDFDEDGVLVGFKGPLIHTFNKN 163 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHT---T--BTTE-EEEEE-EEE-TTSBEEEE-SS---TT-HH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHc---CCCCCCe-EEEeeeEEECCcceEeecCCCceEEeeCC
Confidence 3579999999999999999999999999999999999877 432 111 122 111 111121111111
Q ss_pred --HH------HHcCCCCCCcEEEEecChhhHHHHHHc
Q 010305 468 --IT------NSLGVDKPSEILFVTDVYQEATAAKAA 496 (513)
Q Consensus 468 --~l------~~l~~~~p~~~l~VGDs~~Di~aA~~a 496 (513)
++ +++. ...+++..|||..|+..|..+
T Consensus 164 ~~~l~~~~~~~~~~--~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 164 ESALEDSPYFKQLK--KRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp HHHHTTHHHHHCTT--T--EEEEEESSSGGGGTTTT-
T ss_pred cccccCchHHHHhc--cCCcEEEecCccCChHhhcCC
Confidence 11 2222 267899999999999987666
No 234
>PLN02580 trehalose-phosphatase
Probab=91.47 E-value=0.35 Score=50.16 Aligned_cols=35 Identities=20% Similarity=0.096 Sum_probs=28.2
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhc
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN 438 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~ 438 (513)
+-|+++++|+.|.+. .+++|+|+.+...++.++.-
T Consensus 142 ~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 142 MSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred CCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCC
Confidence 556888888888887 58999999998888877753
No 235
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.87 E-value=0.73 Score=48.35 Aligned_cols=88 Identities=13% Similarity=0.199 Sum_probs=70.8
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--e----cccCCCCCHHHHHHHHHHcCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D----TAVGNKRETPSYVEITNSLGVD 475 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~----~~~~~KP~p~~~~~~l~~l~~~ 475 (513)
.+|....+.++.|+++|+-++|+|-+....++..+...+ |.+. + .....-|+.+-+.++++++++-
T Consensus 255 ~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp--------~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg 326 (574)
T COG3882 255 EAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP--------DMILKEEDFAVFQINWDPKAENIRKIAKKLNLG 326 (574)
T ss_pred hhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC--------CeEeeHhhhhhheecCCcchhhHHHHHHHhCCC
Confidence 356667789999999999999999887777777777662 2333 1 2345688999999999999998
Q ss_pred CCCcEEEEecChhhHHHHHHcCC
Q 010305 476 KPSEILFVTDVYQEATAAKAAGK 498 (513)
Q Consensus 476 ~p~~~l~VGDs~~Di~aA~~aG~ 498 (513)
.+..+||+|++...+--+.-+=
T Consensus 327 -~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 327 -LDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred -ccceEEecCCHHHHHHHHhcCc
Confidence 9999999999988888777663
No 236
>PLN03017 trehalose-phosphatase
Probab=90.83 E-value=0.43 Score=49.11 Aligned_cols=17 Identities=18% Similarity=0.206 Sum_probs=13.5
Q ss_pred EEEEecChhhHHHHHHc
Q 010305 480 ILFVTDVYQEATAAKAA 496 (513)
Q Consensus 480 ~l~VGDs~~Di~aA~~a 496 (513)
.+||||..+|-.+-+.+
T Consensus 305 pvyiGDD~TDEDaF~~L 321 (366)
T PLN03017 305 PVYIGDDRTDEDAFKML 321 (366)
T ss_pred EEEeCCCCccHHHHHHH
Confidence 69999999887776655
No 237
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=90.73 E-value=0.52 Score=48.34 Aligned_cols=100 Identities=14% Similarity=0.126 Sum_probs=75.7
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee-ec----------------------------
Q 010305 404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DT---------------------------- 454 (513)
Q Consensus 404 ~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~-~~---------------------------- 454 (513)
.+-...+|..+++.|.++.++||+.-.+......+.-..++..|||.++ ..
T Consensus 200 d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~ 279 (424)
T KOG2469|consen 200 DGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNT 279 (424)
T ss_pred cCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccC
Confidence 3444559999999999999999999888887777663347888998876 21
Q ss_pred ---ccCCCCCHHHHHHHHHHcCCCCCCcEEEEecCh-hhHHH-HHHcCCcEEEEe
Q 010305 455 ---AVGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATA-AKAAGKELFVIL 504 (513)
Q Consensus 455 ---~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~-~Di~a-A~~aG~~~i~v~ 504 (513)
..+.++++.....+++.+++. -.++++|||+. .||-- -+.-|+.+++|.
T Consensus 280 ~p~e~~~~ySggs~~~~~~~l~~~-g~diLy~gdHi~~dvl~skk~~~wrt~lv~ 333 (424)
T KOG2469|consen 280 GPLEQGGVYSGGSLKTVETSMKVK-GKDILYGGDHIWGDVLVSKKRRGWRTVLVA 333 (424)
T ss_pred CcchhcccCCcchHHHHHHHhccc-ccceeecccceeeeEEecceecceEEEEEe
Confidence 012345667888899999997 89999999999 56644 345688888775
No 238
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=90.51 E-value=0.69 Score=54.80 Aligned_cols=41 Identities=7% Similarity=0.134 Sum_probs=37.9
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcc
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR 445 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~ 445 (513)
++.|++.++++.|+++|+++.++|+-+...+..+.+.+ |+.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~---gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVAREC---GIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCC
Confidence 78999999999999999999999999999888888888 774
No 239
>PRK10444 UMP phosphatase; Provisional
Probab=90.37 E-value=1.5 Score=42.79 Aligned_cols=51 Identities=10% Similarity=0.029 Sum_probs=35.2
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF 452 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~ 452 (513)
.++||+.++|+.|+++|++++++||++......+.+++...|+.---+.++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ 67 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFY 67 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEe
Confidence 489999999999999999999999997654333333332116632234444
No 240
>PLN02151 trehalose-phosphatase
Probab=90.29 E-value=0.5 Score=48.44 Aligned_cols=14 Identities=43% Similarity=0.757 Sum_probs=12.2
Q ss_pred eEEEEccccccccc
Q 010305 285 RCIVLDIEGTTTPI 298 (513)
Q Consensus 285 kavlFDlDGTL~d~ 298 (513)
.+++||+||||++.
T Consensus 99 ~ll~lDyDGTL~PI 112 (354)
T PLN02151 99 IVMFLDYDGTLSPI 112 (354)
T ss_pred eEEEEecCccCCCC
Confidence 58999999999864
No 241
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=90.20 E-value=0.42 Score=47.02 Aligned_cols=48 Identities=15% Similarity=0.278 Sum_probs=40.1
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecC
Q 010305 457 GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 457 ~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G 506 (513)
..-.+...+..+++.+|++ +++++.|||+.+|++.-+.+|.. +.+..+
T Consensus 193 ~gvsKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~-vAm~NA 240 (270)
T PRK10513 193 KRVNKGTGVKSLAEHLGIK-PEEVMAIGDQENDIAMIEYAGVG-VAMGNA 240 (270)
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhCCce-EEecCc
Confidence 3444568899999999998 99999999999999999999985 444444
No 242
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=89.63 E-value=0.6 Score=53.04 Aligned_cols=30 Identities=13% Similarity=0.089 Sum_probs=22.3
Q ss_pred CCcEEEEecChhhHHHHHHcCCcEEEEecC
Q 010305 477 PSEILFVTDVYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 477 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G 506 (513)
++.++++||+.+|..+-+.++...+.|.-|
T Consensus 671 ~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG 700 (726)
T PRK14501 671 YDFVLAIGDDTTDEDMFRALPETAITVKVG 700 (726)
T ss_pred CCEEEEECCCCChHHHHHhcccCceEEEEC
Confidence 679999999999999999875333333333
No 243
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=89.28 E-value=2.8 Score=44.76 Aligned_cols=28 Identities=14% Similarity=0.082 Sum_probs=24.6
Q ss_pred HHHHHHHCCCeEEEEeCchHHHHHHHHhc
Q 010305 410 ALEKWHSLGTKVYIYSSGSRLAQRLIFGN 438 (513)
Q Consensus 410 ~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~ 438 (513)
.++..+..| +.+|+|..++..++..++.
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake 128 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKE 128 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHH
Confidence 556667788 9999999999999999997
No 244
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=88.88 E-value=1 Score=43.95 Aligned_cols=13 Identities=31% Similarity=0.411 Sum_probs=8.4
Q ss_pred EEEcccccccccc
Q 010305 287 IVLDIEGTTTPIS 299 (513)
Q Consensus 287 vlFDlDGTL~d~~ 299 (513)
|+||+||||++..
T Consensus 2 i~~DlDGTll~~~ 14 (256)
T TIGR01486 2 IFTDLDGTLLDPH 14 (256)
T ss_pred EEEcCCCCCcCCC
Confidence 5667777776653
No 245
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=87.77 E-value=1.1 Score=44.21 Aligned_cols=18 Identities=39% Similarity=0.456 Sum_probs=14.6
Q ss_pred CCCeEEEEcccccccccc
Q 010305 282 LFPRCIVLDIEGTTTPIS 299 (513)
Q Consensus 282 ~~ikavlFDlDGTL~d~~ 299 (513)
..-++++||+||||++..
T Consensus 16 a~~~~~~lDyDGTl~~i~ 33 (266)
T COG1877 16 ARKRLLFLDYDGTLTEIV 33 (266)
T ss_pred ccceEEEEeccccccccc
Confidence 345799999999998754
No 246
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=87.58 E-value=22 Score=33.94 Aligned_cols=38 Identities=8% Similarity=-0.024 Sum_probs=30.4
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhcc
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~ 439 (513)
..+-||+.++++.|.++ ..-+|+|.+-..+.+++.+.+
T Consensus 82 a~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~i 119 (315)
T COG4030 82 AKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMI 119 (315)
T ss_pred cccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhc
Confidence 47999999999999987 566777777777777777665
No 247
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=87.18 E-value=0.67 Score=44.55 Aligned_cols=43 Identities=7% Similarity=0.037 Sum_probs=32.6
Q ss_pred cCCCCCHHHHHHHHHHcCC--CCCCcEEEEecChhhHHHHHHcCCcEE
Q 010305 456 VGNKRETPSYVEITNSLGV--DKPSEILFVTDVYQEATAAKAAGKELF 501 (513)
Q Consensus 456 ~~~KP~p~~~~~~l~~l~~--~~p~~~l~VGDs~~Di~aA~~aG~~~i 501 (513)
...|+. ....+++.+++ + +++|++|||+.+|+.+.+.+|+..+
T Consensus 179 ~~sK~~--al~~l~~~~~~~~~-~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGK--AIKRLLDLYKLRPG-AIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHH--HHHHHHHHhccccC-cccEEEEcCCHHHHHHHHhCCCcEe
Confidence 445544 45556666654 6 7899999999999999999998754
No 248
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=87.10 E-value=1.7 Score=48.67 Aligned_cols=94 Identities=17% Similarity=0.147 Sum_probs=71.3
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccce----ee-----ecc-------------cCCC
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG----FF-----DTA-------------VGNK 459 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~----i~-----~~~-------------~~~K 459 (513)
+|.|++.+.++.+++.|+++.++|+-+...+..+.+++ |+...-+. .+ |+. ....
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~i---Gi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR 660 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREI---GIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFAR 660 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHh---CCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEe
Confidence 78999999999999999999999999999999999999 76543331 11 110 0123
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCc
Q 010305 460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 460 P~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~ 499 (513)
-.|..=.++.+.++-. .+=+.|-||..+|-.+-|.|.+.
T Consensus 661 ~~P~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIG 699 (972)
T KOG0202|consen 661 AEPQHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIG 699 (972)
T ss_pred cCchhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccc
Confidence 3555556666666655 66689999999999999988765
No 249
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=87.03 E-value=1.4 Score=40.96 Aligned_cols=14 Identities=36% Similarity=0.638 Sum_probs=11.7
Q ss_pred eEEEEccccccccc
Q 010305 285 RCIVLDIEGTTTPI 298 (513)
Q Consensus 285 kavlFDlDGTL~d~ 298 (513)
-.++||+||||+..
T Consensus 12 ~l~lfdvdgtLt~~ 25 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPP 25 (252)
T ss_pred eEEEEecCCccccc
Confidence 37999999999754
No 250
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=86.93 E-value=1.1 Score=51.61 Aligned_cols=26 Identities=15% Similarity=0.181 Sum_probs=22.2
Q ss_pred HcCCCCCCcEEEEecChhhHHHHHHcC
Q 010305 471 SLGVDKPSEILFVTDVYQEATAAKAAG 497 (513)
Q Consensus 471 ~l~~~~p~~~l~VGDs~~Di~aA~~aG 497 (513)
.+|.. ++.+++|||..+|..+-+.++
T Consensus 776 ~~g~~-~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 776 ERGML-PDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred hcCCC-cccEEEEcCCccHHHHHHHhh
Confidence 35786 899999999999998888775
No 251
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=86.67 E-value=0.71 Score=45.35 Aligned_cols=48 Identities=10% Similarity=0.050 Sum_probs=36.3
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHH---HHHHHHhccCCCCcccccceee
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNYGDLRKYLSGFF 452 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~---~~~~~l~~~~~~gl~~~fd~i~ 452 (513)
.++|++.++|+.|+++|++++++||++.. .....++.+ |+.--.+.++
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~---g~~~~~~~i~ 71 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRL---GFDISEDEVF 71 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHc---CCCCCHHHeE
Confidence 38999999999999999999999997654 355566666 6643334454
No 252
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=86.66 E-value=3 Score=40.16 Aligned_cols=80 Identities=16% Similarity=0.096 Sum_probs=58.1
Q ss_pred eEEEEeCchHHHHHHHHhccCCCCcccccc--eeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcC
Q 010305 420 KVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--GFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAG 497 (513)
Q Consensus 420 ~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd--~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG 497 (513)
--++||++.-.....+.=-+ +|.++|. .|++....+| ...|..|.+++|-+ ...-++|||....-++|+..+
T Consensus 177 vNvLVTs~qLVPaLaKcLLy---~L~~~f~ieNIYSa~kvGK--~~cFe~I~~Rfg~p-~~~f~~IGDG~eEe~aAk~l~ 250 (274)
T TIGR01658 177 INVLVTSGQLIPSLAKCLLF---RLDTIFRIENVYSSIKVGK--LQCFKWIKERFGHP-KVRFCAIGDGWEECTAAQAMN 250 (274)
T ss_pred eEEEEEcCccHHHHHHHHHh---ccCCccccccccchhhcch--HHHHHHHHHHhCCC-CceEEEeCCChhHHHHHHhcC
Confidence 35677777644433333334 5666664 4555444454 67899999999985 778899999999999999999
Q ss_pred CcEEEEec
Q 010305 498 KELFVILD 505 (513)
Q Consensus 498 ~~~i~v~~ 505 (513)
+.++-|..
T Consensus 251 wPFw~I~~ 258 (274)
T TIGR01658 251 WPFVKIDL 258 (274)
T ss_pred CCeEEeec
Confidence 99988764
No 253
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=86.43 E-value=0.86 Score=43.57 Aligned_cols=27 Identities=19% Similarity=0.188 Sum_probs=16.4
Q ss_pred EEEcccccccccccccccchhhHhhhHHHH
Q 010305 287 IVLDIEGTTTPISFVSEVLFPYARDNVGKH 316 (513)
Q Consensus 287 vlFDlDGTL~d~~~~~~~~~~~~~~~~~~~ 316 (513)
|+||+||||++... .+-+...+.+..+
T Consensus 1 i~~DlDGTLl~~~~---~i~~~~~~al~~l 27 (254)
T PF08282_consen 1 IFSDLDGTLLNSDG---KISPETIEALKEL 27 (254)
T ss_dssp EEEECCTTTCSTTS---SSCHHHHHHHHHH
T ss_pred cEEEECCceecCCC---eeCHHHHHHHHhh
Confidence 68999999987541 1334444444443
No 254
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=86.43 E-value=0.76 Score=45.31 Aligned_cols=16 Identities=25% Similarity=0.372 Sum_probs=10.6
Q ss_pred CCeEEEEccccccccc
Q 010305 283 FPRCIVLDIEGTTTPI 298 (513)
Q Consensus 283 ~ikavlFDlDGTL~d~ 298 (513)
|+|+|+||+||||++.
T Consensus 1 m~kli~~DlDGTLl~~ 16 (272)
T PRK15126 1 MARLAAFDMDGTLLMP 16 (272)
T ss_pred CccEEEEeCCCcCcCC
Confidence 3567777777777754
No 255
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=86.04 E-value=4.6 Score=39.32 Aligned_cols=78 Identities=12% Similarity=-0.002 Sum_probs=49.2
Q ss_pred CCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcC
Q 010305 418 GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAG 497 (513)
Q Consensus 418 G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG 497 (513)
-++++|+|..+.....+.++.+..=|+. +|..+--.+-.| -.+++.++-. +|++|...-++.|. .+
T Consensus 186 piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLgG~~K------~~vL~~~~ph-----IFFDDQ~~H~~~a~-~~ 251 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLGGLPK------GPVLKAFRPH-----IFFDDQDGHLESAS-KV 251 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhCCCch------hHHHHhhCCC-----EeecCchhhhhHhh-cC
Confidence 4899999977655445555543100332 333331122233 1255565544 89999999999998 89
Q ss_pred CcEEEEecCCCC
Q 010305 498 KELFVILDGWMQ 509 (513)
Q Consensus 498 ~~~i~v~~G~~~ 509 (513)
+.++.|-||-.+
T Consensus 252 vps~hVP~gv~n 263 (264)
T PF06189_consen 252 VPSGHVPYGVAN 263 (264)
T ss_pred CCEEeccCCcCC
Confidence 999999888643
No 256
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=84.10 E-value=1.4 Score=43.57 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=38.1
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccccc
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL 448 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~f 448 (513)
..+.+.++|+.|+++|++++++|+.+...+..+++.+ ++..+|
T Consensus 22 ~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l---~l~~~~ 64 (273)
T PRK00192 22 SYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKEL---GLEDPF 64 (273)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCCCE
Confidence 5678999999999999999999999999999999988 776544
No 257
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=83.94 E-value=1.2 Score=43.91 Aligned_cols=19 Identities=32% Similarity=0.223 Sum_probs=13.9
Q ss_pred CCCCCeEEEEccccccccc
Q 010305 280 SGLFPRCIVLDIEGTTTPI 298 (513)
Q Consensus 280 ~~~~ikavlFDlDGTL~d~ 298 (513)
+...+++|++||||||++.
T Consensus 3 ~~~~~~lI~~DlDGTLL~~ 21 (271)
T PRK03669 3 SLQDPLLIFTDLDGTLLDS 21 (271)
T ss_pred CcCCCeEEEEeCccCCcCC
Confidence 3566778888888888764
No 258
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=82.12 E-value=2.5 Score=50.17 Aligned_cols=38 Identities=18% Similarity=0.258 Sum_probs=34.3
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhcc
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~ 439 (513)
++.||+.++++.|+++|+++.++|+-..+.+..+....
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~ 668 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSC 668 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHh
Confidence 78999999999999999999999999888877776666
No 259
>PLN02382 probable sucrose-phosphatase
Probab=81.30 E-value=2.5 Score=44.64 Aligned_cols=46 Identities=13% Similarity=0.116 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHc---CCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCC
Q 010305 461 ETPSYVEITNSL---GVDKPSEILFVTDVYQEATAAKAAGKELFVILDGW 507 (513)
Q Consensus 461 ~p~~~~~~l~~l---~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~ 507 (513)
+-..+..+++++ |++ +++++.+||+.||++.-..+|...|.+..+.
T Consensus 176 Kg~Al~~L~~~~~~~gi~-~~~~iafGDs~NDleMl~~ag~~gvam~NA~ 224 (413)
T PLN02382 176 KGQALAYLLKKLKAEGKA-PVNTLVCGDSGNDAELFSVPDVYGVMVSNAQ 224 (413)
T ss_pred HHHHHHHHHHHhhhcCCC-hhcEEEEeCCHHHHHHHhcCCCCEEEEcCCc
Confidence 457788899998 997 9999999999999999999998777776543
No 260
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=81.22 E-value=4.3 Score=43.16 Aligned_cols=85 Identities=13% Similarity=0.184 Sum_probs=65.2
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEE
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l 481 (513)
..-||++|-+.+||+.|++...+|+-++-....+.+.. |+++|.- ..||+-. ....++.+-+ -.=+.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EA---GVDdfiA-------eatPEdK--~~~I~~eQ~~-grlVA 513 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA---GVDDFIA-------EATPEDK--LALIRQEQAE-GRLVA 513 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHh---Cchhhhh-------cCChHHH--HHHHHHHHhc-CcEEE
Confidence 46799999999999999999999999988888888888 8765422 3555433 4455555554 66788
Q ss_pred EEecChhhHHHHHHcCCc
Q 010305 482 FVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 482 ~VGDs~~Di~aA~~aG~~ 499 (513)
|.||..||..+-.+|.+.
T Consensus 514 MtGDGTNDAPALAqAdVg 531 (681)
T COG2216 514 MTGDGTNDAPALAQADVG 531 (681)
T ss_pred EcCCCCCcchhhhhcchh
Confidence 999999998777666543
No 261
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=80.64 E-value=1.5 Score=42.99 Aligned_cols=30 Identities=13% Similarity=0.364 Sum_probs=20.8
Q ss_pred CCCeEEEEcccccccccccccccchhhHhhhHH
Q 010305 282 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNVG 314 (513)
Q Consensus 282 ~~ikavlFDlDGTL~d~~~~~~~~~~~~~~~~~ 314 (513)
+++|.|+||+||||++... .+-+...+.+.
T Consensus 1 ~~~kli~~DlDGTLl~~~~---~i~~~~~~al~ 30 (264)
T COG0561 1 MMIKLLAFDLDGTLLDSNK---TISPETKEALA 30 (264)
T ss_pred CCeeEEEEcCCCCccCCCC---ccCHHHHHHHH
Confidence 5789999999999998753 13344444444
No 262
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=79.73 E-value=8.7 Score=38.55 Aligned_cols=88 Identities=17% Similarity=0.186 Sum_probs=58.2
Q ss_pred CccCCCHHHHHHHHHHCC-CeEEEEeCchHHHHHHHHhc-----cCCCCc-----ccccceeeecccCCCCCHHHHHHHH
Q 010305 401 GEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGN-----SNYGDL-----RKYLSGFFDTAVGNKRETPSYVEIT 469 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G-~~l~i~Tn~~~~~~~~~l~~-----~~~~gl-----~~~fd~i~~~~~~~KP~p~~~~~~l 469 (513)
..++||+-.+.+.|.+.| .+++-+||++......+-+. ++.+.+ ...||.++......|- ..+..++
T Consensus 195 r~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~--~~l~nil 272 (373)
T COG4850 195 RQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGAARKG--QSLRNIL 272 (373)
T ss_pred cCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccchhhhcc--cHHHHHH
Confidence 379999999999999998 89999999987654433332 222222 1234555543344443 3355577
Q ss_pred HHcCCCCCCcEEEEecCh-hhHHHH
Q 010305 470 NSLGVDKPSEILFVTDVY-QEATAA 493 (513)
Q Consensus 470 ~~l~~~~p~~~l~VGDs~-~Di~aA 493 (513)
.++. ..+.+.|||+- .|.+.=
T Consensus 273 ~~~p---~~kfvLVGDsGE~DpeIY 294 (373)
T COG4850 273 RRYP---DRKFVLVGDSGEHDPEIY 294 (373)
T ss_pred HhCC---CceEEEecCCCCcCHHHH
Confidence 7764 45899999998 787653
No 263
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=79.23 E-value=6.3 Score=39.44 Aligned_cols=85 Identities=9% Similarity=0.026 Sum_probs=47.2
Q ss_pred cCCCHHHHHHHHHHC----CCeEEEEeCchHHH----HHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCC
Q 010305 403 VFDDVPEALEKWHSL----GTKVYIYSSGSRLA----QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGV 474 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~----G~~l~i~Tn~~~~~----~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~ 474 (513)
+.||+.++|+.|.+. .++..++||+..-. ++.+.+.+ +..--=|.++. ...| |.. +.++.
T Consensus 52 ~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~L---gv~Vs~dqviq---SHsP----~r~-l~~~~- 119 (389)
T KOG1618|consen 52 PIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALL---GVEVSADQVIQ---SHSP----FRL-LVEYH- 119 (389)
T ss_pred CCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhh---CCccCHHHHHh---hcCh----HHH-Hhhhh-
Confidence 556777777777776 79999999985322 22333333 22211111211 1111 332 22433
Q ss_pred CCCCcEEEEecChhhHHHHHHcCCcEEE
Q 010305 475 DKPSEILFVTDVYQEATAAKAAGKELFV 502 (513)
Q Consensus 475 ~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 502 (513)
-++++.+|+.. =.+.|...|.+.|.
T Consensus 120 --~k~vLv~G~~~-vr~vAegyGFk~Vv 144 (389)
T KOG1618|consen 120 --YKRVLVVGQGS-VREVAEGYGFKNVV 144 (389)
T ss_pred --hceEEEecCCc-HHHHhhccCcccee
Confidence 45899999643 45667788887654
No 264
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=78.85 E-value=28 Score=33.78 Aligned_cols=98 Identities=13% Similarity=0.129 Sum_probs=66.2
Q ss_pred ccCCCHHHHHHHHHHC---CCeEEEEeCchHHHHHHHHhccCCCCcccccc--eeeecccCCCCCHHHHHHHHHHcCCCC
Q 010305 402 EVFDDVPEALEKWHSL---GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--GFFDTAVGNKRETPSYVEITNSLGVDK 476 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~---G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd--~i~~~~~~~KP~p~~~~~~l~~l~~~~ 476 (513)
.++|+..++++..+.. |+.+.-+++.+....+.+.+. |-.-... ..+++. ..-.+|+.+..+.+..++.
T Consensus 104 ~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~----G~~~vmPlg~pIGsg-~Gi~~~~~I~~I~e~~~vp- 177 (248)
T cd04728 104 TLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA----GCAAVMPLGSPIGSG-QGLLNPYNLRIIIERADVP- 177 (248)
T ss_pred ccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc----CCCEeCCCCcCCCCC-CCCCCHHHHHHHHHhCCCc-
Confidence 5899999999998887 999884555555555555543 2211111 112211 2233588888777765553
Q ss_pred CCcEEEEe---cChhhHHHHHHcCCcEEEEecCCCC
Q 010305 477 PSEILFVT---DVYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 477 p~~~l~VG---Ds~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
+++| .++.|+..|.+.|...++|.++.+.
T Consensus 178 ----VI~egGI~tpeda~~AmelGAdgVlV~SAIt~ 209 (248)
T cd04728 178 ----VIVDAGIGTPSDAAQAMELGADAVLLNTAIAK 209 (248)
T ss_pred ----EEEeCCCCCHHHHHHHHHcCCCEEEEChHhcC
Confidence 6666 4568999999999999999998765
No 265
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=78.61 E-value=2.2 Score=41.16 Aligned_cols=22 Identities=18% Similarity=0.227 Sum_probs=15.1
Q ss_pred CcEEEEecChhhHHHHHHcCCc
Q 010305 478 SEILFVTDVYQEATAAKAAGKE 499 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~aG~~ 499 (513)
.-++|+||..+|-.+-+.+.-.
T Consensus 185 ~~~l~~GDD~tDE~~f~~~~~~ 206 (235)
T PF02358_consen 185 DFVLYIGDDRTDEDAFRALREL 206 (235)
T ss_dssp --EEEEESSHHHHHHHHTTTTS
T ss_pred ceeEEecCCCCCHHHHHHHHhc
Confidence 4689999999887776665443
No 266
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.76 E-value=5.1 Score=38.76 Aligned_cols=92 Identities=11% Similarity=0.061 Sum_probs=56.8
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee------ec----ccCCCCCH-------HH
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------DT----AVGNKRET-------PS 464 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~------~~----~~~~KP~p-------~~ 464 (513)
.+.+|..+++..|+.+++++.|+|.+-...++.++.... ++.+ +-.++ +. .+..+|-. ..
T Consensus 138 ~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~--~~~p-n~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v 214 (298)
T KOG3128|consen 138 ALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKL--VLHP-NVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSV 214 (298)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHh--ccCc-cHHhhhhhhhhcccchhhhhhHHHHHHHccchHH
Confidence 567899999999999999999999998877776666441 2222 11111 11 11222211 12
Q ss_pred HHHHHHHcCC-CCCCcEEEEecChhhHHHHHHc
Q 010305 465 YVEITNSLGV-DKPSEILFVTDVYQEATAAKAA 496 (513)
Q Consensus 465 ~~~~l~~l~~-~~p~~~l~VGDs~~Di~aA~~a 496 (513)
.....+.+.. ....++++.||+..|+..|--+
T Consensus 215 ~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 215 LQNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred HHhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 2222333322 2267899999999999877644
No 267
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=76.89 E-value=3.5 Score=39.14 Aligned_cols=38 Identities=13% Similarity=0.132 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcc
Q 010305 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR 445 (513)
Q Consensus 405 pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~ 445 (513)
+.+.++|+.|+++|++++++||.+...+..+++.+ ++.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l---~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKAL---GLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---CCC
Confidence 44789999999999999999999999999999988 664
No 268
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=75.23 E-value=3.2 Score=40.47 Aligned_cols=43 Identities=14% Similarity=0.247 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEec
Q 010305 461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILD 505 (513)
Q Consensus 461 ~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 505 (513)
+-.....++++++++ +++++.+|||.+|+..- ..+...|.|..
T Consensus 166 K~~Al~~L~~~~~~~-~~~vl~aGDSgND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 166 KGAALRYLMERWGIP-PEQVLVAGDSGNDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp HHHHHHHHHHHHT---GGGEEEEESSGGGHHHH-CCSSEEEE-TT
T ss_pred HHHHHHHHHHHhCCC-HHHEEEEeCCCCcHHHH-cCcCCEEEEcC
Confidence 567888999999997 99999999999999766 77888887754
No 269
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=75.18 E-value=1.4 Score=39.60 Aligned_cols=16 Identities=38% Similarity=0.561 Sum_probs=12.9
Q ss_pred eEEEEccccccccccc
Q 010305 285 RCIVLDIEGTTTPISF 300 (513)
Q Consensus 285 kavlFDlDGTL~d~~~ 300 (513)
|+++||+||||+.+..
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 6899999999998763
No 270
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=74.71 E-value=2.7 Score=40.86 Aligned_cols=15 Identities=33% Similarity=0.596 Sum_probs=13.2
Q ss_pred eEEEEcccccccccc
Q 010305 285 RCIVLDIEGTTTPIS 299 (513)
Q Consensus 285 kavlFDlDGTL~d~~ 299 (513)
++++||+||||++..
T Consensus 4 ~~l~lD~DGTL~~~~ 18 (244)
T TIGR00685 4 RAFFFDYDGTLSEIV 18 (244)
T ss_pred EEEEEecCccccCCc
Confidence 689999999999864
No 271
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=74.38 E-value=6.1 Score=45.87 Aligned_cols=38 Identities=21% Similarity=0.233 Sum_probs=31.1
Q ss_pred ccCCCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHhcc
Q 010305 402 EVFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGNS 439 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~-G~~l~i~Tn~~~~~~~~~l~~~ 439 (513)
.+-|++.++|+.|.+. +..++|+|+.+.+.++..+...
T Consensus 622 ~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~ 660 (934)
T PLN03064 622 RLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF 660 (934)
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC
Confidence 3667888999999875 5689999999999888888754
No 272
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=74.12 E-value=8.9 Score=37.81 Aligned_cols=14 Identities=29% Similarity=0.503 Sum_probs=12.1
Q ss_pred eEEEEccccccccc
Q 010305 285 RCIVLDIEGTTTPI 298 (513)
Q Consensus 285 kavlFDlDGTL~d~ 298 (513)
.+|+||+||||++.
T Consensus 15 ~li~~D~DGTLl~~ 28 (266)
T PRK10187 15 YAWFFDLDGTLAEI 28 (266)
T ss_pred EEEEEecCCCCCCC
Confidence 58999999999974
No 273
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=74.03 E-value=5.4 Score=45.80 Aligned_cols=36 Identities=22% Similarity=0.237 Sum_probs=21.5
Q ss_pred cCCCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHhc
Q 010305 403 VFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGN 438 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~-G~~l~i~Tn~~~~~~~~~l~~ 438 (513)
+-|++.++|+.|.+. +-.++|+|+.+.+..+..+..
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 569 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE 569 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCC
Confidence 345566666666554 455667776666666665543
No 274
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=73.98 E-value=2.5 Score=42.14 Aligned_cols=54 Identities=15% Similarity=0.110 Sum_probs=41.6
Q ss_pred cCCCCCHHHHHHHHH--------HcCCCCCCcEEEEecCh-hhHHHHH---------------HcCCcEEEEecCCCC
Q 010305 456 VGNKRETPSYVEITN--------SLGVDKPSEILFVTDVY-QEATAAK---------------AAGKELFVILDGWMQ 509 (513)
Q Consensus 456 ~~~KP~p~~~~~~l~--------~l~~~~p~~~l~VGDs~-~Di~aA~---------------~aG~~~i~v~~G~~~ 509 (513)
...||.+-.|..+.. +.+..++....||||.+ .|+.+|. +-|+..|+|.+|-.+
T Consensus 268 t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV~~ 345 (389)
T KOG1618|consen 268 TLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGVYN 345 (389)
T ss_pred ccCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeeeeec
Confidence 457888877776543 23444578899999999 8999997 778999999987544
No 275
>PRK00208 thiG thiazole synthase; Reviewed
Probab=73.92 E-value=40 Score=32.74 Aligned_cols=98 Identities=13% Similarity=0.099 Sum_probs=64.0
Q ss_pred ccCCCHHHHHHHHHHC---CCeEEEEeCchHHHHHHHHhccCCCCcccccc--eeeecccCCCCCHHHHHHHHHHcCCCC
Q 010305 402 EVFDDVPEALEKWHSL---GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--GFFDTAVGNKRETPSYVEITNSLGVDK 476 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~---G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd--~i~~~~~~~KP~p~~~~~~l~~l~~~~ 476 (513)
.++|+..++++..+.. |+.+.-+++.+....+.+.+. |-.-... ..++.. .+-.+|+.+..+.+..++.
T Consensus 104 ~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~----G~~~vmPlg~pIGsg-~gi~~~~~i~~i~e~~~vp- 177 (250)
T PRK00208 104 TLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA----GCAAVMPLGAPIGSG-LGLLNPYNLRIIIEQADVP- 177 (250)
T ss_pred CCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc----CCCEeCCCCcCCCCC-CCCCCHHHHHHHHHhcCCe-
Confidence 5789999999998887 998883444455455554442 2211111 112211 2233578877777765552
Q ss_pred CCcEEEEe---cChhhHHHHHHcCCcEEEEecCCCC
Q 010305 477 PSEILFVT---DVYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 477 p~~~l~VG---Ds~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
+++| .++.|+..|.+.|...++|.++...
T Consensus 178 ----VIveaGI~tpeda~~AmelGAdgVlV~SAItk 209 (250)
T PRK00208 178 ----VIVDAGIGTPSDAAQAMELGADAVLLNTAIAV 209 (250)
T ss_pred ----EEEeCCCCCHHHHHHHHHcCCCEEEEChHhhC
Confidence 6666 4568999999999999999988764
No 276
>PLN03190 aminophospholipid translocase; Provisional
Probab=73.09 E-value=8.7 Score=46.06 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=31.4
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHh
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFG 437 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~ 437 (513)
++.+|+.++++.|+++|+++.++|+-....+..+-.
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~ 761 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGY 761 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Confidence 789999999999999999999999987776665544
No 277
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=71.46 E-value=5.2 Score=37.80 Aligned_cols=40 Identities=15% Similarity=0.065 Sum_probs=35.6
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcc
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR 445 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~ 445 (513)
+.|...+.|++|+++|++++++|+.+...++.+.+.+ ++.
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l---~~~ 58 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLI---GTS 58 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHh---CCC
Confidence 6678999999999999999999999998888888887 554
No 278
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=71.29 E-value=29 Score=35.14 Aligned_cols=98 Identities=16% Similarity=0.171 Sum_probs=68.3
Q ss_pred ccCCCHHHHHHHHHHC---CCeEEEEeCchHHHHHHHHhccCCCCcccc--cceeeecccCCCCCHHHHHHHHHHcCCCC
Q 010305 402 EVFDDVPEALEKWHSL---GTKVYIYSSGSRLAQRLIFGNSNYGDLRKY--LSGFFDTAVGNKRETPSYVEITNSLGVDK 476 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~---G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~--fd~i~~~~~~~KP~p~~~~~~l~~l~~~~ 476 (513)
.++|+..++++..+.. |+.+.++++.+....+.+.+.- -.-. +-..++. +.+=.+|+.+..+.+...++
T Consensus 178 ~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~g----~~avmPl~~pIGs-g~gv~~p~~i~~~~e~~~vp- 251 (326)
T PRK11840 178 TLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDAG----AVAVMPLGAPIGS-GLGIQNPYTIRLIVEGATVP- 251 (326)
T ss_pred CcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhcC----CEEEeeccccccC-CCCCCCHHHHHHHHHcCCCc-
Confidence 5889999999998887 9999777777776666655432 2100 0111121 11222899999999986664
Q ss_pred CCcEEEEec---ChhhHHHHHHcCCcEEEEecCCCC
Q 010305 477 PSEILFVTD---VYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 477 p~~~l~VGD---s~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
++||- ++.|+..|.+.|...+++..|-..
T Consensus 252 ----VivdAGIg~~sda~~AmelGadgVL~nSaIa~ 283 (326)
T PRK11840 252 ----VLVDAGVGTASDAAVAMELGCDGVLMNTAIAE 283 (326)
T ss_pred ----EEEeCCCCCHHHHHHHHHcCCCEEEEcceecc
Confidence 67774 448999999999999999988653
No 279
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=70.25 E-value=6.8 Score=38.09 Aligned_cols=40 Identities=23% Similarity=0.218 Sum_probs=35.4
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcc
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR 445 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~ 445 (513)
+-+...++|++|+++|++++++|+.+...+...++.+ ++.
T Consensus 17 i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~---~~~ 56 (256)
T TIGR00099 17 ISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKEL---GLD 56 (256)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CCC
Confidence 5578899999999999999999999998888888887 654
No 280
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=70.20 E-value=6.4 Score=39.27 Aligned_cols=37 Identities=14% Similarity=0.230 Sum_probs=31.3
Q ss_pred CccCCCHHHHHHHHHHCC-CeEEEEeCchHHHHHHHHh
Q 010305 401 GEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFG 437 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G-~~l~i~Tn~~~~~~~~~l~ 437 (513)
..+||...++++.+|+.| ++++|+||++.+.+..-+.
T Consensus 91 PTLy~~L~elI~~~k~~g~~~tflvTNgslpdv~~~L~ 128 (296)
T COG0731 91 PTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDVLEELK 128 (296)
T ss_pred cccccCHHHHHHHHHhcCCceEEEEeCCChHHHHHHhc
Confidence 469999999999999999 7999999999955544443
No 281
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=69.72 E-value=6.4 Score=37.40 Aligned_cols=41 Identities=17% Similarity=0.026 Sum_probs=35.6
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccc
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK 446 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~ 446 (513)
+-|.+.++|++|+++|++++++|+.+...+..+++.+ ++..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l---~~~~ 61 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLI---GTSG 61 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh---CCCC
Confidence 5578899999999999999999999998888888888 6654
No 282
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=69.12 E-value=22 Score=30.73 Aligned_cols=84 Identities=15% Similarity=0.048 Sum_probs=53.8
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCch-HHHHHHHHhccCCCCcccccceee------ecccCCCCCHHHHHHHHHHcC
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGS-RLAQRLIFGNSNYGDLRKYLSGFF------DTAVGNKRETPSYVEITNSLG 473 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~-~~~~~~~l~~~~~~gl~~~fd~i~------~~~~~~KP~p~~~~~~l~~l~ 473 (513)
...|+++...|..|+++|+.++++|++. ...+...|+.+ .+..-+-.-. ......-.+-..|..+-+..+
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f---kvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~s~ 119 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF---KVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSN 119 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh---ccCcccccchhhhcCceeeecCcccchhHHHHhhccC
Confidence 4689999999999999999999999985 44566777766 3332111100 011111223455666666677
Q ss_pred CCCCCcEEEEecChh
Q 010305 474 VDKPSEILFVTDVYQ 488 (513)
Q Consensus 474 ~~~p~~~l~VGDs~~ 488 (513)
+. -.+..+..|-..
T Consensus 120 ~~-~k~~~~fdDesr 133 (144)
T KOG4549|consen 120 SI-EKNKQVFDDESR 133 (144)
T ss_pred cc-hhceeeeccccc
Confidence 76 667777777553
No 283
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=66.71 E-value=77 Score=30.97 Aligned_cols=95 Identities=12% Similarity=0.079 Sum_probs=69.9
Q ss_pred ccCCCHHHHHHH---HHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee---ec--ccCCCCCHHHHHHHHHHcC
Q 010305 402 EVFDDVPEALEK---WHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---DT--AVGNKRETPSYVEITNSLG 473 (513)
Q Consensus 402 ~~~pg~~~~L~~---L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~---~~--~~~~KP~p~~~~~~l~~l~ 473 (513)
.++|+..++|+. |-+.|+.+.-.+|.+....+++.+.- - ..+- .. .+..=.+|..+..+++...
T Consensus 118 ~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~rLed~G----c----~aVMPlgsPIGSg~Gl~n~~~l~~i~e~~~ 189 (267)
T CHL00162 118 YLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHLEDIG----C----ATVMPLGSPIGSGQGLQNLLNLQIIIENAK 189 (267)
T ss_pred ccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHHcC----C----eEEeeccCcccCCCCCCCHHHHHHHHHcCC
Confidence 588988887765 67789999999999998777665532 2 2222 11 2333458888888988877
Q ss_pred CCCCCcEEEEec---ChhhHHHHHHcCCcEEEEecCCCC
Q 010305 474 VDKPSEILFVTD---VYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 474 ~~~p~~~l~VGD---s~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
++ ++||- ++.|+..|.+.|...+++..|-..
T Consensus 190 vp-----VivdAGIgt~sDa~~AmElGaDgVL~nSaIak 223 (267)
T CHL00162 190 IP-----VIIDAGIGTPSEASQAMELGASGVLLNTAVAQ 223 (267)
T ss_pred Cc-----EEEeCCcCCHHHHHHHHHcCCCEEeecceeec
Confidence 74 66664 458999999999999999987653
No 284
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=65.94 E-value=8.6 Score=36.33 Aligned_cols=37 Identities=22% Similarity=0.183 Sum_probs=33.2
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhcc
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~ 439 (513)
+.|.+.++|++|+++|++++++|+.+...+..+++.+
T Consensus 16 i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l 52 (225)
T TIGR01482 16 INESALEAIRKAESVGIPVVLVTGNSVQFARALAKLI 52 (225)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh
Confidence 5577889999999999999999999998888888877
No 285
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=65.22 E-value=9.7 Score=37.19 Aligned_cols=40 Identities=23% Similarity=0.285 Sum_probs=35.4
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcc
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR 445 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~ 445 (513)
+-|...++|++|+++|++++++|+.+...+...++.+ ++.
T Consensus 21 i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l---~~~ 60 (272)
T PRK10530 21 ILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQAL---ALD 60 (272)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc---CCC
Confidence 5678899999999999999999999998888888888 654
No 286
>PRK10976 putative hydrolase; Provisional
Probab=64.05 E-value=9.5 Score=37.27 Aligned_cols=41 Identities=12% Similarity=0.118 Sum_probs=35.5
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCccc
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK 446 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~ 446 (513)
+-|...+.|++|+++|++++++|+.+...+...++.+ ++..
T Consensus 20 is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l---~~~~ 60 (266)
T PRK10976 20 LSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNL---EIKS 60 (266)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc---CCCC
Confidence 5567899999999999999999999998888888888 6653
No 287
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=61.45 E-value=44 Score=37.44 Aligned_cols=44 Identities=7% Similarity=0.089 Sum_probs=37.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEE--ecChhhHHHHHHcCCcEEE
Q 010305 458 NKRETPSYVEITNSLGVDKPSEILFV--TDVYQEATAAKAAGKELFV 502 (513)
Q Consensus 458 ~KP~p~~~~~~l~~l~~~~p~~~l~V--GDs~~Di~aA~~aG~~~i~ 502 (513)
.-.+-.....+++.++++ .++++.| ||+.||+..-+.+|...+.
T Consensus 611 gvdKG~AL~~L~e~~gI~-~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 611 GNDKGKAIKILNELFRLN-FGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred CCCHHHHHHHHHHHhCCC-ccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 345667888899999997 8999888 9999999999999996543
No 288
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=59.46 E-value=1.1e+02 Score=29.51 Aligned_cols=92 Identities=13% Similarity=0.135 Sum_probs=60.4
Q ss_pred ccCCCHHHHHHH---HHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee---ec--ccCCCCCHHHHHHHHHHcC
Q 010305 402 EVFDDVPEALEK---WHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---DT--AVGNKRETPSYVEITNSLG 473 (513)
Q Consensus 402 ~~~pg~~~~L~~---L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~---~~--~~~~KP~p~~~~~~l~~l~ 473 (513)
.++|+..++++. |-+.|+.+.-.+|.+....+++.+.- - ..+- .. .+..=-+|..+..++++.+
T Consensus 104 ~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~akrL~d~G----c----aavMPlgsPIGSg~Gi~n~~~l~~i~~~~~ 175 (247)
T PF05690_consen 104 TLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEDAG----C----AAVMPLGSPIGSGRGIQNPYNLRIIIERAD 175 (247)
T ss_dssp T--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHHHHHHTT---------SEBEEBSSSTTT---SSTHHHHHHHHHHGS
T ss_pred CcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHHCC----C----CEEEecccccccCcCCCCHHHHHHHHHhcC
Confidence 588988887765 77889999999999988877666532 2 2222 11 2233457889999999999
Q ss_pred CCCCCcEEEEec---ChhhHHHHHHcCCcEEEEecC
Q 010305 474 VDKPSEILFVTD---VYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 474 ~~~p~~~l~VGD---s~~Di~aA~~aG~~~i~v~~G 506 (513)
++ ++|+- +++|..-|.+.|+..|+|.+.
T Consensus 176 vP-----vIvDAGiG~pSdaa~AMElG~daVLvNTA 206 (247)
T PF05690_consen 176 VP-----VIVDAGIGTPSDAAQAMELGADAVLVNTA 206 (247)
T ss_dssp SS-----BEEES---SHHHHHHHHHTT-SEEEESHH
T ss_pred Cc-----EEEeCCCCCHHHHHHHHHcCCceeehhhH
Confidence 86 55553 458999999999999999753
No 289
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=58.71 E-value=34 Score=38.91 Aligned_cols=94 Identities=18% Similarity=0.095 Sum_probs=61.9
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccc-eee-ecccCCCCCHHHHHHHHHHcCC-----
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-GFF-DTAVGNKRETPSYVEITNSLGV----- 474 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd-~i~-~~~~~~KP~p~~~~~~l~~l~~----- 474 (513)
+..||+.+.++.++..|+.+-.+|+.+...++.+...+ |+..-=+ ... +.....+-..+-..++..++.+
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eC---GILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSS 723 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIAREC---GILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSS 723 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHc---ccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCC
Confidence 78999999999999999999999999999999999988 6643222 121 1111112222222222222211
Q ss_pred ------------CCCCcEEE-EecChhhHHHHHHcCCc
Q 010305 475 ------------DKPSEILF-VTDVYQEATAAKAAGKE 499 (513)
Q Consensus 475 ------------~~p~~~l~-VGDs~~Di~aA~~aG~~ 499 (513)
+ -.+++- -||..+|-.+-++|.+.
T Consensus 724 P~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVG 760 (1034)
T KOG0204|consen 724 PNDKHLLVKGLIK-QGEVVAVTGDGTNDAPALKEADVG 760 (1034)
T ss_pred CchHHHHHHHHHh-cCcEEEEecCCCCCchhhhhcccc
Confidence 1 234544 49999999999988654
No 290
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=56.72 E-value=38 Score=36.94 Aligned_cols=86 Identities=16% Similarity=0.135 Sum_probs=54.6
Q ss_pred CHHHHHHHHHHCCCeEEEEeCchHHH-HHHHHhccCCCCcccccceee-ecccCCCCCHHHHHHHHHHcCCCCCCcEEEE
Q 010305 406 DVPEALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSEILFV 483 (513)
Q Consensus 406 g~~~~L~~L~~~G~~l~i~Tn~~~~~-~~~~l~~~~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~V 483 (513)
++...|+..++.+-+++|++-.+... .+.+.+.+ ++. ++.+. .+ .-+......-+++-|++ ++|
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll---~~~--i~~~~~~~----~~e~~~~~~~l~~~G~~-----~vi 150 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAF---NLD--IVQRSYVT----EEDARSCVNDLRARGIG-----AVV 150 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHh---CCc--eEEEEecC----HHHHHHHHHHHHHCCCC-----EEE
Confidence 67778888888888999999765443 33333333 332 22211 11 11233344455556775 788
Q ss_pred ecChhhHHHHHHcCCcEEEEecC
Q 010305 484 TDVYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 484 GDs~~Di~aA~~aG~~~i~v~~G 506 (513)
||... ...|+++||..|+++.|
T Consensus 151 G~~~~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 151 GAGLI-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred CChHH-HHHHHHcCCceEEEecH
Confidence 99864 78899999999999765
No 291
>PRK08324 short chain dehydrogenase; Validated
Probab=56.51 E-value=21 Score=40.30 Aligned_cols=52 Identities=17% Similarity=0.318 Sum_probs=47.9
Q ss_pred CCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC
Q 010305 198 PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNH 249 (513)
Q Consensus 198 ~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~ 249 (513)
|..+++|+.|-|++++|.+..+|....+.+|.+++....+..+|...++|..
T Consensus 345 ~~p~~~l~~g~g~~~~g~~~~~a~~~~d~~~~~~~~~~~a~~~~~~~~l~~~ 396 (681)
T PRK08324 345 PNPRVVLIPGLGMFSFGKDKKTARVAADIYENAINVMRGAEAVGRYEPLSEQ 396 (681)
T ss_pred CCCeEEEECCCceEEeCCCHHHhhhhHHHHHHHHHHHhhhhhcCCccCCChh
Confidence 4579999999999999999999999999999999999999999998887744
No 292
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=56.38 E-value=8.1 Score=32.45 Aligned_cols=36 Identities=25% Similarity=0.402 Sum_probs=25.6
Q ss_pred eeeecCCC---CchHHHHHHHHHHhhCCCceEEEEcCCccee
Q 010305 174 VPIIENTA---YENELTDSLAKAIDAYPKATAVLVRNHGIYV 212 (513)
Q Consensus 174 vpv~~~~~---~~~~la~~v~~~l~~~~~~~~vll~nHG~~~ 212 (513)
||+|+... ...++++.|.+++++ .-.+.|.|||+-.
T Consensus 1 iPvIDls~~~~~~~~~~~~l~~A~~~---~GFf~l~nhGi~~ 39 (116)
T PF14226_consen 1 IPVIDLSPDPADREEVAEQLRDACEE---WGFFYLVNHGIPQ 39 (116)
T ss_dssp --EEEHGGCHHHHHHHHHHHHHHHHH---TSEEEEESSSSSH
T ss_pred CCeEECCCCCccHHHHHHHHHHHHHh---CCEEEEecccccc
Confidence 56776542 345778888888887 5889999999753
No 293
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=55.71 E-value=86 Score=33.12 Aligned_cols=99 Identities=15% Similarity=0.102 Sum_probs=70.4
Q ss_pred ccCCCHHHHHHHHHHC-CCeEEEE-eCc-hHHHHHHHHhccCCCCcccccceee-ecccCCCCCHHHHHHHHHHcCCCCC
Q 010305 402 EVFDDVPEALEKWHSL-GTKVYIY-SSG-SRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~-G~~l~i~-Tn~-~~~~~~~~l~~~~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~l~~l~~~~p 477 (513)
...|++.+=|+.|.++ |++++=. ++. +.+.++.-++.+ . ...+|.++ |+.+...-+.+++.++.+--.+-.|
T Consensus 138 ~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak~al~~a---k-~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P 213 (451)
T COG0541 138 TYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAALEKA---K-EEGYDVVIVDTAGRLHIDEELMDELKEIKEVINP 213 (451)
T ss_pred cCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHHHHHHHH---H-HcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCC
Confidence 4578999999988765 6666654 233 555667777777 2 34478777 8777778888999887766554339
Q ss_pred CcEEEEecChhhHHHHHH-------cCCcEEEEe
Q 010305 478 SEILFVTDVYQEATAAKA-------AGKELFVIL 504 (513)
Q Consensus 478 ~~~l~VGDs~~Di~aA~~-------aG~~~i~v~ 504 (513)
+++++|=|+..+=+++.. .|+..|.++
T Consensus 214 ~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 214 DETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred CeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 999999999865555443 477777776
No 294
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=54.86 E-value=1.1e+02 Score=29.41 Aligned_cols=85 Identities=11% Similarity=0.128 Sum_probs=55.8
Q ss_pred HHHHHC-CCeEEEEeCchH---HHHHHHHhcc-CCCCcccccceee-ecccCCCCCHHHHHHHHHHcCCCCCCcEEEEec
Q 010305 412 EKWHSL-GTKVYIYSSGSR---LAQRLIFGNS-NYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSEILFVTD 485 (513)
Q Consensus 412 ~~L~~~-G~~l~i~Tn~~~---~~~~~~l~~~-~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGD 485 (513)
.+..++ ++.+.+++++.. +.+....... . .+.+ |.++ -+-...-|-|.--+.+++..|++ |++|||
T Consensus 24 DErAdRedI~vrv~gsGaKm~pe~~~~~~~~~~~--~~~p--Df~i~isPN~a~PGP~~ARE~l~~~~iP----~IvI~D 95 (277)
T PRK00994 24 DERADREDIDVRVVGSGAKMGPEEVEEVVKKMLE--EWKP--DFVIVISPNPAAPGPKKAREILKAAGIP----CIVIGD 95 (277)
T ss_pred HhhhcccCceEEEeccCCCCCHHHHHHHHHHHHH--hhCC--CEEEEECCCCCCCCchHHHHHHHhcCCC----EEEEcC
Confidence 333344 789999998852 2222222211 0 2233 3433 33445667788888999998985 999999
Q ss_pred Ch--hhHHHHHHcCCcEEEEe
Q 010305 486 VY--QEATAAKAAGKELFVIL 504 (513)
Q Consensus 486 s~--~Di~aA~~aG~~~i~v~ 504 (513)
.+ .+-++-++.|+..|.+.
T Consensus 96 ~p~~K~~d~l~~~g~GYIivk 116 (277)
T PRK00994 96 APGKKVKDAMEEQGLGYIIVK 116 (277)
T ss_pred CCccchHHHHHhcCCcEEEEe
Confidence 99 46688888999988875
No 295
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=54.67 E-value=1.3e+02 Score=26.19 Aligned_cols=99 Identities=13% Similarity=0.200 Sum_probs=51.6
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHH-HHHHhccC-CCCcccccceee---ecc-----cCCCCCHHHHHHHHHHcCC
Q 010305 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQ-RLIFGNSN-YGDLRKYLSGFF---DTA-----VGNKRETPSYVEITNSLGV 474 (513)
Q Consensus 405 pg~~~~L~~L~~~G~~l~i~Tn~~~~~~-~~~l~~~~-~~gl~~~fd~i~---~~~-----~~~KP~p~~~~~~l~~l~~ 474 (513)
..+.+++....++|-+++++-|+..... ..+..++. ..++...+...+ ++. ...--++.....+++.+++
T Consensus 22 ~~aa~~i~~~~~~gg~i~~~G~G~S~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (138)
T PF13580_consen 22 EKAADLIAEALRNGGRIFVCGNGHSAAIASHFAADLGGLFGVNRILLPAIALNDDALTAISNDLEYDEGFARQLLALYDI 101 (138)
T ss_dssp HHHHHHHHHHHHTT--EEEEESTHHHHHHHHHHHHHHCHSSSTSSS-SEEETTSTHHHHHHHHTTGGGTHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHCCCEEEEEcCchhhhHHHHHHHHHhcCcCCCcccccccccccchHhhhhcccchhhHHHHHHHHHcCC
Confidence 3555666666677889999999865422 22222220 002332222222 110 0112234555677778888
Q ss_pred CCCCcEEEE----ecChh---hHHHHHHcCCcEEEEe
Q 010305 475 DKPSEILFV----TDVYQ---EATAAKAAGKELFVIL 504 (513)
Q Consensus 475 ~~p~~~l~V----GDs~~---Di~aA~~aG~~~i~v~ 504 (513)
. |.+++++ |.+++ =++.|++.|+.+|.++
T Consensus 102 ~-~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalT 137 (138)
T PF13580_consen 102 R-PGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALT 137 (138)
T ss_dssp --TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEE
T ss_pred C-CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 7 9999888 66664 4566777899999986
No 296
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=51.61 E-value=49 Score=36.24 Aligned_cols=87 Identities=15% Similarity=0.140 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHCCCeEEEEeCchHHH-HHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 010305 406 DVPEALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 484 (513)
Q Consensus 406 g~~~~L~~L~~~G~~l~i~Tn~~~~~-~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VG 484 (513)
++...|...++.+-+++|++-.+... .+.+.+.+ ++. ++.+. ....-+......-+++.|++ ++||
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l---~~~--i~~~~---~~~~~e~~~~v~~lk~~G~~-----~vvG 161 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTF---NLR--IEQRS---YVTEEDARGQINELKANGIE-----AVVG 161 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHh---CCc--eEEEE---ecCHHHHHHHHHHHHHCCCC-----EEEc
Confidence 67778888888888999999765443 33333333 332 12111 00111334444555666776 7889
Q ss_pred cChhhHHHHHHcCCcEEEEecC
Q 010305 485 DVYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 485 Ds~~Di~aA~~aG~~~i~v~~G 506 (513)
|... .+.|.++|+..+++..+
T Consensus 162 ~~~~-~~~A~~~g~~g~~~~s~ 182 (538)
T PRK15424 162 AGLI-TDLAEEAGMTGIFIYSA 182 (538)
T ss_pred CchH-HHHHHHhCCceEEecCH
Confidence 9775 78999999999998643
No 297
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=50.08 E-value=13 Score=34.04 Aligned_cols=87 Identities=18% Similarity=0.110 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHCCCeEEEEeCchHHH-HHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHH---cCCCCCCcEE
Q 010305 406 DVPEALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNS---LGVDKPSEIL 481 (513)
Q Consensus 406 g~~~~L~~L~~~G~~l~i~Tn~~~~~-~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~---l~~~~p~~~l 481 (513)
++.+.|..++..+-++++++..+... ...+.+.+ ++. ..-..++ +++-+..++++ -|++ +
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll---~~~-i~~~~~~-------~~~e~~~~i~~~~~~G~~-----v 128 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELL---GVD-IKIYPYD-------SEEEIEAAIKQAKAEGVD-----V 128 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHH---T-E-EEEEEES-------SHHHHHHHHHHHHHTT-------E
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHh---CCc-eEEEEEC-------CHHHHHHHHHHHHHcCCc-----E
Confidence 55666666677788999999776543 33333334 331 1111112 23334444444 4555 8
Q ss_pred EEecChhhHHHHHHcCCcEEEEecCCCC
Q 010305 482 FVTDVYQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 482 ~VGDs~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
+||+... .+.|++.|++++.+..|..+
T Consensus 129 iVGg~~~-~~~A~~~gl~~v~i~sg~es 155 (176)
T PF06506_consen 129 IVGGGVV-CRLARKLGLPGVLIESGEES 155 (176)
T ss_dssp EEESHHH-HHHHHHTTSEEEESS--HHH
T ss_pred EECCHHH-HHHHHHcCCcEEEEEecHHH
Confidence 9999874 78999999999998877543
No 298
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=48.90 E-value=1.3e+02 Score=31.33 Aligned_cols=98 Identities=14% Similarity=0.142 Sum_probs=65.0
Q ss_pred ccCCCHHHHHHHHHH-CCCeEEEE-eCc-hHHHHHHHHhccCCCCcccccceee-ecccCCCCCHHHHHHHHHHcC-CCC
Q 010305 402 EVFDDVPEALEKWHS-LGTKVYIY-SSG-SRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLG-VDK 476 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~-~G~~l~i~-Tn~-~~~~~~~~l~~~~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~l~~l~-~~~ 476 (513)
...+|+.+-|+.... .+++.+.- |-. +......-++++ =.+-||.|+ |..+..|-+..+|.+..+--+ +.
T Consensus 139 TFRagAfDQLkqnA~k~~iP~ygsyte~dpv~ia~egv~~f----Kke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~- 213 (483)
T KOG0780|consen 139 TFRAGAFDQLKQNATKARVPFYGSYTEADPVKIASEGVDRF----KKENFDVIIVDTSGRHKQEASLFEEMKQVSKAIK- 213 (483)
T ss_pred ccccchHHHHHHHhHhhCCeeEecccccchHHHHHHHHHHH----HhcCCcEEEEeCCCchhhhHHHHHHHHHHHhhcC-
Confidence 456788777777544 35666542 211 222333344444 235588888 888899999999999877654 55
Q ss_pred CCcEEEEecChhhHHHHHH-------cCCcEEEEe
Q 010305 477 PSEILFVTDVYQEATAAKA-------AGKELFVIL 504 (513)
Q Consensus 477 p~~~l~VGDs~~Di~aA~~-------aG~~~i~v~ 504 (513)
|++++||=|+-.+-.+..+ +++..+.++
T Consensus 214 Pd~vi~VmDasiGQaae~Qa~aFk~~vdvg~vIlT 248 (483)
T KOG0780|consen 214 PDEIIFVMDASIGQAAEAQARAFKETVDVGAVILT 248 (483)
T ss_pred CCeEEEEEeccccHhHHHHHHHHHHhhccceEEEE
Confidence 9999999998876655544 367766666
No 299
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=48.79 E-value=30 Score=39.00 Aligned_cols=54 Identities=17% Similarity=0.251 Sum_probs=49.7
Q ss_pred CCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCc
Q 010305 198 PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGP 251 (513)
Q Consensus 198 ~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~ 251 (513)
|..+++|+.+-|++.+|+|..+|--..+..+.++++...+..+|...++++.+.
T Consensus 337 ~~p~~~~~~~~g~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (676)
T TIGR02632 337 PNPRVLLIPGVGMISFGKDKETARVAREFYVNAINVMRGAEAVSEYVSLPEQEA 390 (676)
T ss_pred CCCeEEEEcCcceEEecCCHHHhhhhHHHHHHHHHHHhhhhcccceecCchhhc
Confidence 456899999999999999999999999999999999999999999988887754
No 300
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=47.96 E-value=23 Score=39.14 Aligned_cols=50 Identities=20% Similarity=0.128 Sum_probs=41.1
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccc-eee
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-GFF 452 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd-~i~ 452 (513)
..++.|++.++|+++.+. |.+.|+|-+++.++..+.+-++ .=..||. .|+
T Consensus 199 ~vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liD--P~~~lF~dRIi 249 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLID--PEGKYFGDRII 249 (635)
T ss_pred EEEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhC--CCCccccceEE
Confidence 347999999999999987 9999999999999999999874 3335665 344
No 301
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=46.30 E-value=15 Score=38.30 Aligned_cols=16 Identities=38% Similarity=0.540 Sum_probs=13.6
Q ss_pred CeEEEEcccccccccc
Q 010305 284 PRCIVLDIEGTTTPIS 299 (513)
Q Consensus 284 ikavlFDlDGTL~d~~ 299 (513)
-+.|+||+|||++-+.
T Consensus 375 ~kiVVsDiDGTITkSD 390 (580)
T COG5083 375 KKIVVSDIDGTITKSD 390 (580)
T ss_pred CcEEEEecCCcEEehh
Confidence 5689999999998764
No 302
>COG3347 Uncharacterized conserved protein [Function unknown]
Probab=45.77 E-value=74 Score=32.85 Aligned_cols=55 Identities=16% Similarity=0.186 Sum_probs=49.2
Q ss_pred CCceEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Q 010305 198 PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPT 252 (513)
Q Consensus 198 ~~~~~vll~nHG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~ 252 (513)
|...++|+..-|+++.|+|...|--..+.++.+..+.-.|..+|.-.++++++..
T Consensus 336 p~P~viLipG~Gm~~~g~~~a~A~i~~d~~~~ai~v~~gA~~~g~~~~l~e~e~f 390 (404)
T COG3347 336 PAPRVILIPGLGMLTAGKSAAGARIMGDLYEDAIAVVRGAEALGYYTPLSEAELF 390 (404)
T ss_pred CCCcEEEecCCceeeeccchhhHHHHHHHHHHHHHHhhhhhhhcccccCchhhhc
Confidence 3468999999999999999999999999999999999999999998888777543
No 303
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=45.65 E-value=17 Score=35.41 Aligned_cols=14 Identities=36% Similarity=0.674 Sum_probs=12.0
Q ss_pred CeEEEEcccccccc
Q 010305 284 PRCIVLDIEGTTTP 297 (513)
Q Consensus 284 ikavlFDlDGTL~d 297 (513)
.+.++.|+||||++
T Consensus 2 ~~ll~sDlD~Tl~~ 15 (247)
T PF05116_consen 2 PRLLASDLDGTLID 15 (247)
T ss_dssp SEEEEEETBTTTBH
T ss_pred CEEEEEECCCCCcC
Confidence 46899999999993
No 304
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=43.51 E-value=1.2e+02 Score=31.34 Aligned_cols=79 Identities=14% Similarity=0.121 Sum_probs=52.0
Q ss_pred CeEEEEeCchHHHHHHHHhccCCCCccccc--ceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHc
Q 010305 419 TKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA 496 (513)
Q Consensus 419 ~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~f--d~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~a 496 (513)
.--+++|+.--......+-.+ ||...| ..|+......| -..|++|.+++|-+ -.-+.|||......+|++.
T Consensus 371 cvnVlvTttqLipalaKvLL~---gLg~~fpiENIYSa~kiGK--escFerI~~RFg~K--~~yvvIgdG~eee~aAK~l 443 (468)
T KOG3107|consen 371 CVNVLVTTTQLIPALAKVLLY---GLGSSFPIENIYSATKIGK--ESCFERIQSRFGRK--VVYVVIGDGVEEEQAAKAL 443 (468)
T ss_pred eeEEEEeccchhHHHHHHHHH---hcCCcccchhhhhhhhccH--HHHHHHHHHHhCCc--eEEEEecCcHHHHHHHHhh
Confidence 335677776543322222223 444433 34554334444 57899999999974 5667889999999999999
Q ss_pred CCcEEEEe
Q 010305 497 GKELFVIL 504 (513)
Q Consensus 497 G~~~i~v~ 504 (513)
.|.+.-+.
T Consensus 444 n~PfwrI~ 451 (468)
T KOG3107|consen 444 NMPFWRIS 451 (468)
T ss_pred CCceEeec
Confidence 99987664
No 305
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=43.05 E-value=12 Score=33.08 Aligned_cols=15 Identities=27% Similarity=0.481 Sum_probs=13.1
Q ss_pred eEEEEcccccccccc
Q 010305 285 RCIVLDIEGTTTPIS 299 (513)
Q Consensus 285 kavlFDlDGTL~d~~ 299 (513)
+.+++|+||||+++.
T Consensus 3 ~~lvldld~tl~~~~ 17 (148)
T smart00577 3 KTLVLDLDETLVHST 17 (148)
T ss_pred cEEEEeCCCCeECCC
Confidence 478999999999874
No 306
>PLN02334 ribulose-phosphate 3-epimerase
Probab=41.21 E-value=2.9e+02 Score=26.34 Aligned_cols=98 Identities=10% Similarity=-0.067 Sum_probs=56.5
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCc--hHHHHHHHHhccCCCCcccccc--eeeecccCCCCCHHHHHHHHHHcCCCCCCcE
Q 010305 405 DDVPEALEKWHSLGTKVYIYSSG--SRLAQRLIFGNSNYGDLRKYLS--GFFDTAVGNKRETPSYVEITNSLGVDKPSEI 480 (513)
Q Consensus 405 pg~~~~L~~L~~~G~~l~i~Tn~--~~~~~~~~l~~~~~~gl~~~fd--~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~ 480 (513)
+...+.++.+++.|.++++..|. +.+..+..++.. + .+|+- .++......+..|..+..+.+--...+...+
T Consensus 102 d~~~~~~~~i~~~g~~iGls~~~~t~~~~~~~~~~~~---~-~Dyi~~~~v~pg~~~~~~~~~~~~~i~~~~~~~~~~~I 177 (229)
T PLN02334 102 IHLHRLIQQIKSAGMKAGVVLNPGTPVEAVEPVVEKG---L-VDMVLVMSVEPGFGGQSFIPSMMDKVRALRKKYPELDI 177 (229)
T ss_pred hhHHHHHHHHHHCCCeEEEEECCCCCHHHHHHHHhcc---C-CCEEEEEEEecCCCccccCHHHHHHHHHHHHhCCCCcE
Confidence 44578999999999999999983 455555544430 0 22221 1111112223344444444332222102235
Q ss_pred EEE-ecChhhHHHHHHcCCcEEEEecC
Q 010305 481 LFV-TDVYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 481 l~V-GDs~~Di~aA~~aG~~~i~v~~G 506 (513)
..+ |=+..++....++|...+.+...
T Consensus 178 ~a~GGI~~e~i~~l~~aGad~vvvgsa 204 (229)
T PLN02334 178 EVDGGVGPSTIDKAAEAGANVIVAGSA 204 (229)
T ss_pred EEeCCCCHHHHHHHHHcCCCEEEEChH
Confidence 555 56778999999999999888654
No 307
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=40.54 E-value=62 Score=36.85 Aligned_cols=40 Identities=8% Similarity=0.116 Sum_probs=31.7
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhcc
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~ 439 (513)
.+++-|+++++|+.|++.+.++..+|+.+.-.+-.+.+..
T Consensus 673 ~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v 712 (1160)
T KOG0209|consen 673 SCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEV 712 (1160)
T ss_pred eCCCCccHHHHHHHHhccCceEEEEeCCCccchheehhee
Confidence 4688999999999999999999999988755444444433
No 308
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=39.60 E-value=41 Score=32.14 Aligned_cols=34 Identities=18% Similarity=0.148 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhcc
Q 010305 406 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (513)
Q Consensus 406 g~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~ 439 (513)
-+.+++.+|++.|+++..+|+++...+..+-+.+
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l 60 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSL 60 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhc
Confidence 4668999999999999999999998887777777
No 309
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=39.21 E-value=17 Score=32.90 Aligned_cols=15 Identities=27% Similarity=0.481 Sum_probs=13.1
Q ss_pred eEEEEcccccccccc
Q 010305 285 RCIVLDIEGTTTPIS 299 (513)
Q Consensus 285 kavlFDlDGTL~d~~ 299 (513)
+.+++|+|+||+.+.
T Consensus 2 ~~lvlDLDeTLi~~~ 16 (162)
T TIGR02251 2 KTLVLDLDETLVHST 16 (162)
T ss_pred cEEEEcCCCCcCCCC
Confidence 479999999999875
No 310
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=38.97 E-value=1.5e+02 Score=29.51 Aligned_cols=91 Identities=13% Similarity=0.112 Sum_probs=63.0
Q ss_pred cCCCHHHHHHHHHHCCCe---------EEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHH
Q 010305 403 VFDDVPEALEKWHSLGTK---------VYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNS 471 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~---------l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~ 471 (513)
-.+++.++++.|+++ ++ ++-+|.+..+.++.+.... |.++ ++ ..-.+..-+.++.++
T Consensus 169 s~ddt~~Iv~~l~~r-~p~~~~~~~~~ICyAT~nRQ~Avk~la~~~---------Dl~iVVG~--~nSSNs~rL~eiA~~ 236 (294)
T COG0761 169 SVDDTAEIVAALKER-FPKIEVPPFNDICYATQNRQDAVKELAPEV---------DLVIVVGS--KNSSNSNRLAEIAKR 236 (294)
T ss_pred CHHHHHHHHHHHHHh-CccccCCcccccchhhhhHHHHHHHHhhcC---------CEEEEECC--CCCccHHHHHHHHHH
Confidence 457888899999887 66 5666666666666655544 4333 32 222355567778888
Q ss_pred cCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecCCCCc
Q 010305 472 LGVDKPSEILFVTDVYQEATAAKAAGKELFVILDGWMQV 510 (513)
Q Consensus 472 l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G~~~~ 510 (513)
.|.+ ++.|++ ..||+...=.|..+|+|+-|-...
T Consensus 237 ~g~~----aylId~-~~ei~~~w~~~~~~VGvTAGAStP 270 (294)
T COG0761 237 HGKP----AYLIDD-AEEIDPEWLKGVKTVGVTAGASTP 270 (294)
T ss_pred hCCC----eEEeCC-hHhCCHHHhcCccEEEEecCCCCC
Confidence 8764 667755 779999999999999999887653
No 311
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=38.94 E-value=1.5e+02 Score=29.97 Aligned_cols=28 Identities=11% Similarity=0.135 Sum_probs=25.3
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchH
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSR 429 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~ 429 (513)
-+.|++.++++.++++|..+.|.||+..
T Consensus 84 LL~pdl~eiv~~~~~~g~~v~l~TNG~l 111 (318)
T TIGR03470 84 LLHPEIDEIVRGLVARKKFVYLCTNALL 111 (318)
T ss_pred cccccHHHHHHHHHHcCCeEEEecCcee
Confidence 4678999999999999999999999964
No 312
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
Probab=37.44 E-value=3.5e+02 Score=26.16 Aligned_cols=92 Identities=14% Similarity=0.130 Sum_probs=67.1
Q ss_pred ccCCCHHHHHHH---HHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee---ec--ccCCCCCHHHHHHHHHHcC
Q 010305 402 EVFDDVPEALEK---WHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---DT--AVGNKRETPSYVEITNSLG 473 (513)
Q Consensus 402 ~~~pg~~~~L~~---L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~---~~--~~~~KP~p~~~~~~l~~l~ 473 (513)
.++|+..++|+. |-+.|+.+.-.|+.+....+++.+.- - ..+- .. .+..--+|..++.++++.+
T Consensus 111 tLlPD~~etl~Aae~Lv~eGF~VlPY~~dD~v~arrLee~G----c----aavMPl~aPIGSg~G~~n~~~l~iiie~a~ 182 (262)
T COG2022 111 TLLPDPIETLKAAEQLVKEGFVVLPYTTDDPVLARRLEEAG----C----AAVMPLGAPIGSGLGLQNPYNLEIIIEEAD 182 (262)
T ss_pred ccCCChHHHHHHHHHHHhCCCEEeeccCCCHHHHHHHHhcC----c----eEeccccccccCCcCcCCHHHHHHHHHhCC
Confidence 588988887765 66789999999999998877766532 2 1121 11 2223347888999999998
Q ss_pred CCCCCcEEEEec---ChhhHHHHHHcCCcEEEEecC
Q 010305 474 VDKPSEILFVTD---VYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 474 ~~~p~~~l~VGD---s~~Di~aA~~aG~~~i~v~~G 506 (513)
++ +.|+- +++|...|.+.|+..|++.+-
T Consensus 183 VP-----viVDAGiG~pSdAa~aMElG~DaVL~NTA 213 (262)
T COG2022 183 VP-----VIVDAGIGTPSDAAQAMELGADAVLLNTA 213 (262)
T ss_pred CC-----EEEeCCCCChhHHHHHHhcccceeehhhH
Confidence 86 55543 458999999999999998753
No 313
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=36.40 E-value=65 Score=30.76 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=30.3
Q ss_pred HHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee
Q 010305 407 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF 452 (513)
Q Consensus 407 ~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~ 452 (513)
+.++|..|+++ +.++|+|++.-..++.-+... .+...||.++
T Consensus 1 M~~~L~~L~~~-~~vgvVgGsd~~k~~eQl~~~---~~~~~fdy~f 42 (220)
T PF03332_consen 1 MAELLQKLRKK-VPVGVVGGSDLPKIQEQLGGD---DVLDNFDYVF 42 (220)
T ss_dssp HHHHHHHHHTT-SEEEEEESS-HHHHHHHHSTT---THHHH-SEEE
T ss_pred CHHHHHHHHhc-CeEEEEcchhHHHHHHHHccc---chHhhCCeee
Confidence 46899999986 999999999887666555322 4567788777
No 314
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=35.05 E-value=42 Score=34.14 Aligned_cols=29 Identities=24% Similarity=0.626 Sum_probs=26.0
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHH
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRL 430 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~ 430 (513)
-++|.+.++++.++++|+.++|.||+...
T Consensus 142 lL~p~l~eli~~~k~~Gi~~~L~TNG~~~ 170 (322)
T PRK13762 142 TLYPYLPELIEEFHKRGFTTFLVTNGTRP 170 (322)
T ss_pred cchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 46789999999999999999999999653
No 315
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=33.37 E-value=46 Score=23.17 Aligned_cols=24 Identities=21% Similarity=0.313 Sum_probs=17.9
Q ss_pred EEEEcCC-cceeecCCHHHHHHHHH
Q 010305 202 AVLVRNH-GIYVWGDSWINAKTQAE 225 (513)
Q Consensus 202 ~vll~nH-G~~~~G~sl~~A~~~~~ 225 (513)
.+-...- |+++.|+|+++|+..+.
T Consensus 15 ~~~~pdlpg~~t~G~t~eea~~~~~ 39 (48)
T PF03681_consen 15 VAYFPDLPGCFTQGDTLEEALENAK 39 (48)
T ss_dssp EEEETTCCTCEEEESSHHHHHHHHH
T ss_pred EEEeCCccChhhcCCCHHHHHHHHH
Confidence 4444444 99999999999996543
No 316
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=32.93 E-value=48 Score=31.99 Aligned_cols=35 Identities=9% Similarity=-0.016 Sum_probs=32.1
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhcc
Q 010305 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (513)
Q Consensus 405 pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~ 439 (513)
|.+.+++++++++|++++++|+.+...++.+++.+
T Consensus 24 ~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~ 58 (249)
T TIGR01485 24 LRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQK 58 (249)
T ss_pred HHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcC
Confidence 67889999999999999999999999999888877
No 317
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=32.51 E-value=2.8e+02 Score=27.06 Aligned_cols=94 Identities=11% Similarity=0.071 Sum_probs=54.0
Q ss_pred cCCCHHHHHHHHHHCCCeEE-EEeCc-hHHHHHHHHhccCCCCcccccceeee---cccC---CCCCHHHHHHHHHHcCC
Q 010305 403 VFDDVPEALEKWHSLGTKVY-IYSSG-SRLAQRLIFGNSNYGDLRKYLSGFFD---TAVG---NKRETPSYVEITNSLGV 474 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~-i~Tn~-~~~~~~~~l~~~~~~gl~~~fd~i~~---~~~~---~KP~p~~~~~~l~~l~~ 474 (513)
+++...++++.+++.|+..+ +++-. +.+..+.+.+.. +-|..++. ..+. ..|...-+.+-++++ .
T Consensus 125 p~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~------~gfiy~vs~~G~TG~~~~~~~~~~~~i~~lr~~-~ 197 (256)
T TIGR00262 125 PLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS------QGFVYLVSRAGVTGARNRAASALNELVKRLKAY-S 197 (256)
T ss_pred ChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC------CCCEEEEECCCCCCCcccCChhHHHHHHHHHhh-c
Confidence 55678899999999998866 44433 344555566544 11233332 1111 122222333333332 1
Q ss_pred CCCCcEEEEec---ChhhHHHHHHcCCcEEEEecC
Q 010305 475 DKPSEILFVTD---VYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 475 ~~p~~~l~VGD---s~~Di~aA~~aG~~~i~v~~G 506 (513)
..-++||= +..++..+.++|...+.|...
T Consensus 198 ---~~pi~vgfGI~~~e~~~~~~~~GADgvVvGSa 229 (256)
T TIGR00262 198 ---AKPVLVGFGISKPEQVKQAIDAGADGVIVGSA 229 (256)
T ss_pred ---CCCEEEeCCCCCHHHHHHHHHcCCCEEEECHH
Confidence 12377874 457999999999999888643
No 318
>PLN02887 hydrolase family protein
Probab=31.71 E-value=67 Score=35.52 Aligned_cols=37 Identities=27% Similarity=0.182 Sum_probs=33.5
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhcc
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~ 439 (513)
+-+...++|++|+++|++++|+|+.+...+...++.+
T Consensus 326 Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L 362 (580)
T PLN02887 326 ISETNAKALKEALSRGVKVVIATGKARPAVIDILKMV 362 (580)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Confidence 5577899999999999999999999999888888877
No 319
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II. This oxidoreductase of the 2-nitropropane dioxygenase family (pfam03060) is commonly found in apparent operons with genes involved in fatty acid biosynthesis. Furthermore, this genomic context generally includes the fabG 3-oxoacyl-[ACP] reductase and lacks the fabI enoyl-[ACP] reductase.
Probab=29.44 E-value=4.3e+02 Score=26.60 Aligned_cols=88 Identities=10% Similarity=0.153 Sum_probs=54.9
Q ss_pred HHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee-e--cc-c--CCCCCHHHHHHHHHHcCCCCCCcEE
Q 010305 408 PEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-D--TA-V--GNKRETPSYVEITNSLGVDKPSEIL 481 (513)
Q Consensus 408 ~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~-~--~~-~--~~KP~p~~~~~~l~~l~~~~p~~~l 481 (513)
.++++.+|+.|+++.....+ .+..+.. ... | .|.++ . +. + ...+....+..+.+..+++ ++
T Consensus 99 ~~~i~~lk~~g~~v~~~v~s-~~~a~~a-~~~---G----aD~Ivv~g~eagGh~g~~~~~~ll~~v~~~~~iP----vi 165 (307)
T TIGR03151 99 GKYIPRLKENGVKVIPVVAS-VALAKRM-EKA---G----ADAVIAEGMESGGHIGELTTMALVPQVVDAVSIP----VI 165 (307)
T ss_pred HHHHHHHHHcCCEEEEEcCC-HHHHHHH-HHc---C----CCEEEEECcccCCCCCCCcHHHHHHHHHHHhCCC----EE
Confidence 36899999999886543333 3333333 333 3 45555 1 11 1 1234556666777776663 66
Q ss_pred EEecCh--hhHHHHHHcCCcEEEEecCCC
Q 010305 482 FVTDVY--QEATAAKAAGKELFVILDGWM 508 (513)
Q Consensus 482 ~VGDs~--~Di~aA~~aG~~~i~v~~G~~ 508 (513)
.-|+-. .|+.++...|...|.+-+-|.
T Consensus 166 aaGGI~~~~~~~~al~~GA~gV~iGt~f~ 194 (307)
T TIGR03151 166 AAGGIADGRGMAAAFALGAEAVQMGTRFL 194 (307)
T ss_pred EECCCCCHHHHHHHHHcCCCEeecchHHh
Confidence 667544 789999999999998876553
No 320
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=29.33 E-value=35 Score=32.54 Aligned_cols=57 Identities=25% Similarity=0.341 Sum_probs=33.6
Q ss_pred CCccccchhHHHHhcccHHHHHHHHHHHHHH-HHHcCCccccCCceeEEeCCCCCCCCccEEEEeccCCCCC
Q 010305 10 GGAAAATHTQAYLEGRAVKETRVLISELCRH-FYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKE 80 (513)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~~r~-l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~ 80 (513)
|-.|+..+-+++...-.....|++++++-+. +-+.||.-..||.||+ =|+|.|+++.
T Consensus 107 Gr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSi--------------Dvfp~GwDKt 164 (220)
T PF03332_consen 107 GRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISI--------------DVFPKGWDKT 164 (220)
T ss_dssp -TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEE--------------EEEETT-SGG
T ss_pred cCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEE--------------ccccCCccHH
Confidence 3445555555554433456678888776654 4444777777777776 3788888654
No 321
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=29.14 E-value=73 Score=27.27 Aligned_cols=37 Identities=16% Similarity=0.335 Sum_probs=26.3
Q ss_pred eeeeecCCC---C---chHHHHHHHHHHhhCCCceEEEEcCCccee
Q 010305 173 VVPIIENTA---Y---ENELTDSLAKAIDAYPKATAVLVRNHGIYV 212 (513)
Q Consensus 173 ~vpv~~~~~---~---~~~la~~v~~~l~~~~~~~~vll~nHG~~~ 212 (513)
.||+++... + ..++++.+.+++.+ .-.+.+.|||+-.
T Consensus 37 ~iPvIDls~~~~~~~~~~~~~~~L~~A~~~---~GFf~l~nhGi~~ 79 (120)
T PLN03176 37 EIPVISIAGIDDGGEKRAEICNKIVEACEE---WGVFQIVDHGVDA 79 (120)
T ss_pred CCCeEECccccCCchHHHHHHHHHHHHHHH---CCEEEEECCCCCH
Confidence 388888742 1 12467778888876 4788999999763
No 322
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=28.97 E-value=2.2e+02 Score=28.94 Aligned_cols=97 Identities=11% Similarity=-0.009 Sum_probs=56.1
Q ss_pred HHHHHHHHHHC-CC-eEEEEeCchHHHHHHHHhccCCCCcccccceeeecccC--CCCCHHHHHHHHHHc-CCCCCCcEE
Q 010305 407 VPEALEKWHSL-GT-KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVG--NKRETPSYVEITNSL-GVDKPSEIL 481 (513)
Q Consensus 407 ~~~~L~~L~~~-G~-~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~--~KP~p~~~~~~l~~l-~~~~p~~~l 481 (513)
+..+++.|+++ ++ ...|+|+........+++.+ ++...++..++..+. .+--...+..+.+.+ ..+ |+=++
T Consensus 16 ~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-pDiv~ 91 (365)
T TIGR00236 16 MAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDLF---HLPPDYDLNIMSPGQTLGEITSNMLEGLEELLLEEK-PDIVL 91 (365)
T ss_pred HHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHhc---CCCCCeeeecCCCCCCHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence 46788888876 33 35788888887778888777 776433323322111 111122222222222 233 65666
Q ss_pred EEecChh---hHHHHHHcCCcEEEEecCC
Q 010305 482 FVTDVYQ---EATAAKAAGKELFVILDGW 507 (513)
Q Consensus 482 ~VGDs~~---Di~aA~~aG~~~i~v~~G~ 507 (513)
..||+.. ...+|+..|+..+.+..|-
T Consensus 92 ~~gd~~~~la~a~aa~~~~ipv~h~~~g~ 120 (365)
T TIGR00236 92 VQGDTTTTLAGALAAFYLQIPVGHVEAGL 120 (365)
T ss_pred EeCCchHHHHHHHHHHHhCCCEEEEeCCC
Confidence 6689764 4567777899998876554
No 323
>COG1663 LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane]
Probab=28.49 E-value=1.3e+02 Score=30.67 Aligned_cols=91 Identities=19% Similarity=0.137 Sum_probs=58.2
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEE
Q 010305 404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFV 483 (513)
Q Consensus 404 ~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~V 483 (513)
-|=+..+.+.|+++|++.+++|-+... +. ......+....+....= -++++.+.+ .+.. ++..
T Consensus 63 TP~vi~la~~l~~rG~~~gvvSRGYgg-------~~---~~~~~~~~~~~~a~~~G--DEPlLlA~~-t~~p----v~v~ 125 (336)
T COG1663 63 TPVVIWLAEALQARGVRVGVVSRGYGG-------KL---KVVPLVDNIHTTAAEVG--DEPLLLARR-TGAP----VAVS 125 (336)
T ss_pred CHHHHHHHHHHHhcCCeeEEEecCcCC-------CC---ccccccccCcCChHHcC--chHHHHhhh-cCCc----EEEe
Confidence 477899999999999999999987554 11 11111222211100000 134444443 4443 5666
Q ss_pred ecChhhHHHHHH--cCCcEEEEecCCCCcC
Q 010305 484 TDVYQEATAAKA--AGKELFVILDGWMQVH 511 (513)
Q Consensus 484 GDs~~Di~aA~~--aG~~~i~v~~G~~~~~ 511 (513)
-|....++.+.+ .|+..|.+..|+++..
T Consensus 126 ~~R~~~~~~l~~~~~~~diIi~DDG~Qh~r 155 (336)
T COG1663 126 PDRKDAAKALLAAHLGCDIIVLDDGLQHYR 155 (336)
T ss_pred hhHHHHHHHHHhhCCCCCEEEEcCcchhhH
Confidence 788888999988 7999999999998764
No 324
>cd00956 Transaldolase_FSA Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea, which are member of the MipB/TalC subfamily of class I aldolases. FSA catalyze an aldol cleavage of fructose 6-phosphate and do not utilize fructose, fructose 1-phosphate, fructose 1,6-phosphate, or dihydroxyacetone phosphate. The enzymes belong to the transaldolase family that serves in transfer reactions in the pentose phosphate cycle, and are more distantly related to fructose 1,6-bisphosphate aldolase.
Probab=28.45 E-value=3.5e+02 Score=25.55 Aligned_cols=102 Identities=17% Similarity=0.099 Sum_probs=56.7
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCc
Q 010305 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 479 (513)
Q Consensus 400 ~~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~ 479 (513)
+.+.-..-.++++.|++.|+++.+-+=.+........+.-.. -+.+|+..+-+....+-+--.-...++++.+. +.+
T Consensus 83 KIP~T~~gl~ai~~L~~~gi~v~~T~V~s~~Qa~~Aa~AGA~-yvsP~vgR~~~~g~dg~~~i~~i~~~~~~~~~--~tk 159 (211)
T cd00956 83 KIPVTEDGLKAIKKLSEEGIKTNVTAIFSAAQALLAAKAGAT-YVSPFVGRIDDLGGDGMELIREIRTIFDNYGF--DTK 159 (211)
T ss_pred EEcCcHhHHHHHHHHHHcCCceeeEEecCHHHHHHHHHcCCC-EEEEecChHhhcCCCHHHHHHHHHHHHHHcCC--Cce
Confidence 345555678899999999999886665555554444443210 12222222212111111122233345555565 344
Q ss_pred EEEEe-cChhhHHHHHHcCCcEEEEe
Q 010305 480 ILFVT-DVYQEATAAKAAGKELFVIL 504 (513)
Q Consensus 480 ~l~VG-Ds~~Di~aA~~aG~~~i~v~ 504 (513)
++.-| =++.++..|..+|+..+-+.
T Consensus 160 il~As~r~~~ei~~a~~~Gad~vTv~ 185 (211)
T cd00956 160 ILAASIRNPQHVIEAALAGADAITLP 185 (211)
T ss_pred EEecccCCHHHHHHHHHcCCCEEEeC
Confidence 54444 34479999999999998775
No 325
>PRK00043 thiE thiamine-phosphate pyrophosphorylase; Reviewed
Probab=27.99 E-value=4.8e+02 Score=24.01 Aligned_cols=88 Identities=10% Similarity=0.034 Sum_probs=51.5
Q ss_pred HHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee-ecc--cCCCCC------HHHHHHHHHHcCCCCCC
Q 010305 408 PEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTA--VGNKRE------TPSYVEITNSLGVDKPS 478 (513)
Q Consensus 408 ~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~-~~~--~~~KP~------p~~~~~~l~~l~~~~p~ 478 (513)
...++.++..+..+++.+++..+..+.... +. |.+. +.. ...||. .+.+..+.+.++ .-
T Consensus 94 ~~~~~~~~~~~~~~g~~~~t~~e~~~a~~~-----ga----D~v~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~ 161 (212)
T PRK00043 94 VADARALLGPDAIIGLSTHTLEEAAAALAA-----GA----DYVGVGPIFPTPTKKDAKAPQGLEGLREIRAAVG---DI 161 (212)
T ss_pred HHHHHHHcCCCCEEEEeCCCHHHHHHHhHc-----CC----CEEEECCccCCCCCCCCCCCCCHHHHHHHHHhcC---CC
Confidence 456667777888899888765544333322 22 2322 110 111221 466777766654 12
Q ss_pred cEEEEe-cChhhHHHHHHcCCcEEEEecCC
Q 010305 479 EILFVT-DVYQEATAAKAAGKELFVILDGW 507 (513)
Q Consensus 479 ~~l~VG-Ds~~Di~aA~~aG~~~i~v~~G~ 507 (513)
.++..| =+..++..+.++|...+.+....
T Consensus 162 ~v~a~GGI~~~~i~~~~~~Ga~gv~~gs~i 191 (212)
T PRK00043 162 PIVAIGGITPENAPEVLEAGADGVAVVSAI 191 (212)
T ss_pred CEEEECCcCHHHHHHHHHcCCCEEEEeHHh
Confidence 355555 44589999999999999886443
No 326
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=27.99 E-value=4.6e+02 Score=25.25 Aligned_cols=97 Identities=19% Similarity=0.128 Sum_probs=55.1
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCch--HHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEE
Q 010305 405 DDVPEALEKWHSLGTKVYIYSSGS--RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILF 482 (513)
Q Consensus 405 pg~~~~L~~L~~~G~~l~i~Tn~~--~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~ 482 (513)
+...++++.+++.|++.+++-|.. .+..+.+++..+ ++. |+ .+-...+ .+=.+.+...+.+--... ++..+.
T Consensus 116 ~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~~--~~l-~m-sv~~~~g-~~~~~~~~~~i~~lr~~~-~~~~i~ 189 (244)
T PRK13125 116 DDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLSP--LFI-YY-GLRPATG-VPLPVSVERNIKRVRNLV-GNKYLV 189 (244)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCC--CEE-EE-EeCCCCC-CCchHHHHHHHHHHHHhc-CCCCEE
Confidence 567789999999999998888773 445555555441 111 11 1111111 222223222222221222 334577
Q ss_pred EecCh---hhHHHHHHcCCcEEEEecCC
Q 010305 483 VTDVY---QEATAAKAAGKELFVILDGW 507 (513)
Q Consensus 483 VGDs~---~Di~aA~~aG~~~i~v~~G~ 507 (513)
||=.. .++....++|...+.|...+
T Consensus 190 v~gGI~~~e~i~~~~~~gaD~vvvGSai 217 (244)
T PRK13125 190 VGFGLDSPEDARDALSAGADGVVVGTAF 217 (244)
T ss_pred EeCCcCCHHHHHHHHHcCCCEEEECHHH
Confidence 87644 78888889999998886443
No 327
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=27.64 E-value=5.2e+02 Score=24.51 Aligned_cols=86 Identities=19% Similarity=0.133 Sum_probs=50.6
Q ss_pred HHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCC-HHHHHHHHHHcCCCCCCcEEEEec--
Q 010305 409 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRE-TPSYVEITNSLGVDKPSEILFVTD-- 485 (513)
Q Consensus 409 ~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~-p~~~~~~l~~l~~~~p~~~l~VGD-- 485 (513)
++++.|.+.++ +.|+...+.+....+.+.+..+|+. +++-.. .-|. .+.+..+.++++-. |+=++=+|-
T Consensus 5 ~~~~~l~~~~v-i~vir~~~~~~a~~~~~al~~~Gi~-----~iEit~-~~~~a~~~i~~l~~~~~~~-p~~~vGaGTV~ 76 (213)
T PRK06552 5 EILTKLKANGV-VAVVRGESKEEALKISLAVIKGGIK-----AIEVTY-TNPFASEVIKELVELYKDD-PEVLIGAGTVL 76 (213)
T ss_pred HHHHHHHHCCE-EEEEECCCHHHHHHHHHHHHHCCCC-----EEEEEC-CCccHHHHHHHHHHHcCCC-CCeEEeeeeCC
Confidence 45677877765 7788888888777777766444552 122111 1233 34455555555443 442333332
Q ss_pred ChhhHHHHHHcCCcEEE
Q 010305 486 VYQEATAAKAAGKELFV 502 (513)
Q Consensus 486 s~~Di~aA~~aG~~~i~ 502 (513)
+..+++.|.++|.+++.
T Consensus 77 ~~~~~~~a~~aGA~Fiv 93 (213)
T PRK06552 77 DAVTARLAILAGAQFIV 93 (213)
T ss_pred CHHHHHHHHHcCCCEEE
Confidence 33688888899998764
No 328
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=27.38 E-value=51 Score=31.87 Aligned_cols=29 Identities=14% Similarity=0.158 Sum_probs=25.6
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHH
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLA 431 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~ 431 (513)
+.++..++++.|++.|+++.|-||+....
T Consensus 85 l~~~l~~li~~l~~~g~~v~leTNGtl~~ 113 (238)
T TIGR03365 85 LQKPLGELIDLGKAKGYRFALETQGSVWQ 113 (238)
T ss_pred hhHhHHHHHHHHHHCCCCEEEECCCCCcH
Confidence 45789999999999999999999998643
No 329
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated
Probab=27.29 E-value=6.1e+02 Score=26.33 Aligned_cols=90 Identities=17% Similarity=0.161 Sum_probs=55.0
Q ss_pred HHHHHHHHHHCCCeEEEEeCc--hHHHHHHHHhccCCCCcccccceee-e----c-c-cCCCCCHHHHHHHHHHcCCCCC
Q 010305 407 VPEALEKWHSLGTKVYIYSSG--SRLAQRLIFGNSNYGDLRKYLSGFF-D----T-A-VGNKRETPSYVEITNSLGVDKP 477 (513)
Q Consensus 407 ~~~~L~~L~~~G~~l~i~Tn~--~~~~~~~~l~~~~~~gl~~~fd~i~-~----~-~-~~~KP~p~~~~~~l~~l~~~~p 477 (513)
+.+.++.+++.++.+.+-.+. ..+..+.+.+ . |. |.+. + + . ....+++..+.+.+++.+++
T Consensus 120 ~~~iv~~~~~~~V~v~vr~~~~~~~e~a~~l~e-a---Gv----d~I~vhgrt~~~~h~~~~~~~~~i~~~ik~~~ip-- 189 (368)
T PRK08649 120 ITERIAEIRDAGVIVAVSLSPQRAQELAPTVVE-A---GV----DLFVIQGTVVSAEHVSKEGEPLNLKEFIYELDVP-- 189 (368)
T ss_pred HHHHHHHHHhCeEEEEEecCCcCHHHHHHHHHH-C---CC----CEEEEeccchhhhccCCcCCHHHHHHHHHHCCCC--
Confidence 478889999987666553332 2333333333 2 33 4443 1 1 1 22334788888899988774
Q ss_pred CcEEEEecC--hhhHHHHHHcCCcEEEEecCCCC
Q 010305 478 SEILFVTDV--YQEATAAKAAGKELFVILDGWMQ 509 (513)
Q Consensus 478 ~~~l~VGDs--~~Di~aA~~aG~~~i~v~~G~~~ 509 (513)
+++||- ..+.+.+.++|+..|.|..|-++
T Consensus 190 ---VIaG~V~t~e~A~~l~~aGAD~V~VG~G~Gs 220 (368)
T PRK08649 190 ---VIVGGCVTYTTALHLMRTGAAGVLVGIGPGA 220 (368)
T ss_pred ---EEEeCCCCHHHHHHHHHcCCCEEEECCCCCc
Confidence 444653 36788888899999988655543
No 330
>PLN02997 flavonol synthase
Probab=27.08 E-value=71 Score=32.50 Aligned_cols=36 Identities=31% Similarity=0.368 Sum_probs=28.7
Q ss_pred eeeeecCCC-CchHHHHHHHHHHhhCCCceEEEEcCCcce
Q 010305 173 VVPIIENTA-YENELTDSLAKAIDAYPKATAVLVRNHGIY 211 (513)
Q Consensus 173 ~vpv~~~~~-~~~~la~~v~~~l~~~~~~~~vll~nHG~~ 211 (513)
.||+|+..+ ...+.+++|.+++++ .-.+.+.|||+=
T Consensus 32 ~IPvIDls~~~~~~~~~~l~~Ac~~---~GFF~v~nHGI~ 68 (325)
T PLN02997 32 DVPVVDLSVSDEDFLVREVVKASEE---WGVFQVVNHGIP 68 (325)
T ss_pred CCCeEECCCCCHHHHHHHHHHHHHH---CCEEEEECCCCC
Confidence 499999764 345678889999987 578899999973
No 331
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=26.84 E-value=98 Score=29.41 Aligned_cols=37 Identities=11% Similarity=0.074 Sum_probs=28.0
Q ss_pred cCCC-HHHHHHHHHHCCCeEEEEeCc--hHHHHHHHHhcc
Q 010305 403 VFDD-VPEALEKWHSLGTKVYIYSSG--SRLAQRLIFGNS 439 (513)
Q Consensus 403 ~~pg-~~~~L~~L~~~G~~l~i~Tn~--~~~~~~~~l~~~ 439 (513)
+.++ +.++++.+|+.|+.++|-||+ +.+..+.++...
T Consensus 51 lq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~~~ 90 (213)
T PRK10076 51 MQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKLC 90 (213)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHhc
Confidence 4455 689999999999999999999 444555554433
No 332
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=26.75 E-value=1.7e+02 Score=29.81 Aligned_cols=62 Identities=15% Similarity=0.246 Sum_probs=39.6
Q ss_pred CCcccccceeeecccCC-----CCCHHH----HHHHHHHcCCCCCC--cEEEEecChh----hHHHHHHcCCcEEEEe
Q 010305 442 GDLRKYLSGFFDTAVGN-----KRETPS----YVEITNSLGVDKPS--EILFVTDVYQ----EATAAKAAGKELFVIL 504 (513)
Q Consensus 442 ~gl~~~fd~i~~~~~~~-----KP~p~~----~~~~l~~l~~~~p~--~~l~VGDs~~----Di~aA~~aG~~~i~v~ 504 (513)
+.|.++||.++++.... |...++ ...++++-|++ ++ +.+++||..+ --..++..|+..+.|.
T Consensus 26 gpl~~~fd~~~~d~~~g~ks~EkAe~eLa~eAa~~ALekAGL~-~~DID~IIvGdl~~Q~~~As~vA~~LGIP~fdV~ 102 (327)
T TIGR02845 26 GPLGDYFDKIYDDLYCGEDSWEKAERKLMEDAVNLALKKANLK-KDDVDFFLAGDLLNQIITANFVARDLGIPFLGLY 102 (327)
T ss_pred CCChhhCCEEEeccccCCcCcchhHHHHHHHHHHHHHHHcCCC-HHHCCEEEEeCCCCcccHHHHHHHHhCCCEEEEe
Confidence 48899999999442222 233333 34566777887 77 5788999642 2235677888776654
No 333
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=26.52 E-value=1e+02 Score=34.09 Aligned_cols=16 Identities=31% Similarity=0.532 Sum_probs=13.1
Q ss_pred CeEEEEcccccccccc
Q 010305 284 PRCIVLDIEGTTTPIS 299 (513)
Q Consensus 284 ikavlFDlDGTL~d~~ 299 (513)
-|.||=|+|||++-+.
T Consensus 530 ~kIVISDIDGTITKSD 545 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSD 545 (738)
T ss_pred CcEEEecCCCceEhhh
Confidence 4589999999998753
No 334
>PRK08304 stage V sporulation protein AD; Validated
Probab=26.42 E-value=1.2e+02 Score=30.97 Aligned_cols=63 Identities=22% Similarity=0.359 Sum_probs=40.4
Q ss_pred CCcccccceeeec-ccC----CCCCHH----HHHHHHHHcCCCCCCc--EEEEecChh----hHHHHHHcCCcEEEEec
Q 010305 442 GDLRKYLSGFFDT-AVG----NKRETP----SYVEITNSLGVDKPSE--ILFVTDVYQ----EATAAKAAGKELFVILD 505 (513)
Q Consensus 442 ~gl~~~fd~i~~~-~~~----~KP~p~----~~~~~l~~l~~~~p~~--~l~VGDs~~----Di~aA~~aG~~~i~v~~ 505 (513)
+.|.++||.++++ ... .|...+ ....++++-|++ +++ .+++||..+ -...++..|+.++.|..
T Consensus 32 gpl~~~fd~~~~d~~~Ge~swEkAeseLa~eAa~~ALekAGI~-~~DID~lI~Gdll~Q~~sAs~vA~~LGIPa~dV~g 109 (337)
T PRK08304 32 GPLGKYFDKILDDDYCGEKSWEKAERKMMEDAIQQALQKANLK-KSDIDYLLAGDLLNQIISANFAARELGIPFLGLYG 109 (337)
T ss_pred CCChhhCCeEecccccCCcCccccHHHHHHHHHHHHHHHcCCC-HHHCCEEEEECCCCCcchHHHHHHHhCCcEEEEec
Confidence 4899999999943 222 233433 444567777987 764 688998752 22356777887666653
No 335
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=25.98 E-value=5.8e+02 Score=25.06 Aligned_cols=82 Identities=13% Similarity=0.066 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHC-CCeEEEEeCc---hHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEE
Q 010305 406 DVPEALEKWHSL-GTKVYIYSSG---SRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (513)
Q Consensus 406 g~~~~L~~L~~~-G~~l~i~Tn~---~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l 481 (513)
...++++.|.++ |+++.+++.. +....+.+.+.+ . .. +.++ ...+|+-+...+.+.. +
T Consensus 192 ~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~---~--~~-~~i~-----~~~~~~e~~~~i~~~~-------~ 253 (298)
T TIGR03609 192 RLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQL---L--GP-AEVL-----SPLDPEELLGLFASAR-------L 253 (298)
T ss_pred HHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhc---C--CC-cEEE-----ecCCHHHHHHHHhhCC-------E
Confidence 345566666554 8988888854 333333444433 1 11 1122 2335555555444422 6
Q ss_pred EEecChhhHHHHHHcCCcEEEEec
Q 010305 482 FVTDVYQEATAAKAAGKELFVILD 505 (513)
Q Consensus 482 ~VGDs~~Di~aA~~aG~~~i~v~~ 505 (513)
+||.+.+-.-.|...|..++.+.|
T Consensus 254 vI~~RlH~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 254 VIGMRLHALILAAAAGVPFVALSY 277 (298)
T ss_pred EEEechHHHHHHHHcCCCEEEeec
Confidence 999999999999999999999965
No 336
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=25.92 E-value=1.1e+02 Score=34.94 Aligned_cols=17 Identities=35% Similarity=0.634 Sum_probs=14.4
Q ss_pred CCeEEEEcccccccccc
Q 010305 283 FPRCIVLDIEGTTTPIS 299 (513)
Q Consensus 283 ~ikavlFDlDGTL~d~~ 299 (513)
..++|+||+||||++..
T Consensus 491 ~~rLi~~D~DGTL~~~~ 507 (726)
T PRK14501 491 SRRLLLLDYDGTLVPFA 507 (726)
T ss_pred cceEEEEecCccccCCC
Confidence 35899999999999853
No 337
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=25.90 E-value=2.8e+02 Score=29.40 Aligned_cols=62 Identities=18% Similarity=0.168 Sum_probs=40.9
Q ss_pred CeEEEEeCchHHHHHHHHhccCCCCcc-cccceee-ecccCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 010305 419 TKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSEILFVT 484 (513)
Q Consensus 419 ~~l~i~Tn~~~~~~~~~l~~~~~~gl~-~~fd~i~-~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VG 484 (513)
.+++|+|+.+......+++.+ .-. +.+..++ .....+.-.+.-+..+++.++-. .-+++.|+
T Consensus 136 ~~I~viTs~~gAa~~D~~~~~---~~r~p~~~~~~~~~~vQG~~A~~~i~~al~~~~~~-~~Dviii~ 199 (438)
T PRK00286 136 KRIGVITSPTGAAIRDILTVL---RRRFPLVEVIIYPTLVQGEGAAASIVAAIERANAR-GEDVLIVA 199 (438)
T ss_pred CEEEEEeCCccHHHHHHHHHH---HhcCCCCeEEEecCcCcCccHHHHHHHHHHHhcCC-CCCEEEEe
Confidence 489999999999888888876 322 2234333 33334455677777888887653 34777773
No 338
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=25.78 E-value=60 Score=33.33 Aligned_cols=20 Identities=10% Similarity=-0.066 Sum_probs=16.6
Q ss_pred CCCCCeEEEEcccccccccc
Q 010305 280 SGLFPRCIVLDIEGTTTPIS 299 (513)
Q Consensus 280 ~~~~ikavlFDlDGTL~d~~ 299 (513)
....|++|=||||.||+.-.
T Consensus 8 ~l~~i~~~GFDmDyTLa~Y~ 27 (343)
T TIGR02244 8 NLEKIQVFGFDMDYTLAQYK 27 (343)
T ss_pred ccccCCEEEECccccccccC
Confidence 45679999999999998653
No 339
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=25.37 E-value=1e+02 Score=28.31 Aligned_cols=28 Identities=29% Similarity=0.440 Sum_probs=24.7
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchH
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSR 429 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~ 429 (513)
-++|.+.++++.+++.|+.+.+.||+..
T Consensus 74 ll~~~l~~li~~~~~~g~~v~i~TNg~~ 101 (191)
T TIGR02495 74 TLQAGLPDFLRKVRELGFEVKLDTNGSN 101 (191)
T ss_pred cCcHhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3567799999999999999999999964
No 340
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=25.30 E-value=1.1e+02 Score=23.69 Aligned_cols=29 Identities=10% Similarity=0.031 Sum_probs=22.8
Q ss_pred CcceeecCCHHHHHHHHHHHHHHHHHHHHHHh
Q 010305 208 HGIYVWGDSWINAKTQAECYHYLFDAAIKLHQ 239 (513)
Q Consensus 208 HG~~~~G~sl~~A~~~~~~lE~~a~~~~~a~~ 239 (513)
=|+.+.|+|+++|+ ..++++.+.++.+..
T Consensus 24 pgc~s~G~T~eea~---~n~~eai~l~~e~~~ 52 (73)
T COG1598 24 PGCHSQGETLEEAL---QNAKEAIELHLEALL 52 (73)
T ss_pred CCccccCCCHHHHH---HHHHHHHHHHHHHHH
Confidence 37888999999999 566777777777644
No 341
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=25.15 E-value=5e+02 Score=27.51 Aligned_cols=86 Identities=12% Similarity=0.004 Sum_probs=53.7
Q ss_pred CHHHHHHHHHHCCCeEEEEeCc---------hHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCC
Q 010305 406 DVPEALEKWHSLGTKVYIYSSG---------SRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDK 476 (513)
Q Consensus 406 g~~~~L~~L~~~G~~l~i~Tn~---------~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~ 476 (513)
.+.++++.|.++|+++.+++-. +......+.+.+ .-.... .++.+. .++.-+..++.++.
T Consensus 261 ~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~---~~~~~~-~vi~~~----~~~~e~~~iIs~~d--- 329 (426)
T PRK10017 261 AFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHV---SDPARY-HVVMDE----LNDLEMGKILGACE--- 329 (426)
T ss_pred HHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhc---ccccce-eEecCC----CChHHHHHHHhhCC---
Confidence 4567888888889999988843 233344455544 211000 111111 12333445554432
Q ss_pred CCcEEEEecChhhHHHHHHcCCcEEEEecC
Q 010305 477 PSEILFVTDVYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 477 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G 506 (513)
++||=+.+-...|..+|..++.+.|.
T Consensus 330 ----l~ig~RlHa~I~a~~~gvP~i~i~Y~ 355 (426)
T PRK10017 330 ----LTVGTRLHSAIISMNFGTPAIAINYE 355 (426)
T ss_pred ----EEEEecchHHHHHHHcCCCEEEeeeh
Confidence 69999999999999999999999874
No 342
>PLN02382 probable sucrose-phosphatase
Probab=24.89 E-value=45 Score=35.23 Aligned_cols=14 Identities=29% Similarity=0.240 Sum_probs=11.7
Q ss_pred eEEEEccccccccc
Q 010305 285 RCIVLDIEGTTTPI 298 (513)
Q Consensus 285 kavlFDlDGTL~d~ 298 (513)
-+|+-||||||++.
T Consensus 10 ~lI~sDLDGTLL~~ 23 (413)
T PLN02382 10 LMIVSDLDHTMVDH 23 (413)
T ss_pred EEEEEcCCCcCcCC
Confidence 36777999999976
No 343
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=24.54 E-value=41 Score=30.22 Aligned_cols=16 Identities=25% Similarity=0.272 Sum_probs=13.8
Q ss_pred eEEEEccccccccccc
Q 010305 285 RCIVLDIEGTTTPISF 300 (513)
Q Consensus 285 kavlFDlDGTL~d~~~ 300 (513)
..+++|+|.||+.+..
T Consensus 7 l~LVLDLDeTLihs~~ 22 (156)
T TIGR02250 7 LHLVLDLDQTLIHTTK 22 (156)
T ss_pred eEEEEeCCCCcccccc
Confidence 4899999999998764
No 344
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=24.43 E-value=4.3e+02 Score=28.08 Aligned_cols=58 Identities=24% Similarity=0.267 Sum_probs=37.2
Q ss_pred ccceee-ecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhh---HHHHHH----cCCcEEEEe
Q 010305 447 YLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE---ATAAKA----AGKELFVIL 504 (513)
Q Consensus 447 ~fd~i~-~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~D---i~aA~~----aG~~~i~v~ 504 (513)
.+|.++ |..+....+...+.++.+-.....|.++++|-|...+ +.-|++ .++..+.++
T Consensus 182 ~~DvViIDTaGr~~~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 182 NFDIIIVDTSGRHKQEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred CCCEEEEECCCCCcchHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 367777 7777777777777766655443238999999998643 333332 366666655
No 345
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=24.24 E-value=82 Score=32.18 Aligned_cols=36 Identities=22% Similarity=0.309 Sum_probs=28.7
Q ss_pred eeeeecCCC-CchHHHHHHHHHHhhCCCceEEEEcCCcce
Q 010305 173 VVPIIENTA-YENELTDSLAKAIDAYPKATAVLVRNHGIY 211 (513)
Q Consensus 173 ~vpv~~~~~-~~~~la~~v~~~l~~~~~~~~vll~nHG~~ 211 (513)
.||+|+..+ ...++++.|.+++++ .-.+.+.|||+=
T Consensus 37 ~iPvIDls~~~~~~~~~~l~~Ac~~---~GFf~v~nHGI~ 73 (337)
T PLN02639 37 NVPVIDLGSPDRAQVVQQIGDACRR---YGFFQVINHGVS 73 (337)
T ss_pred CCCeEECCCccHHHHHHHHHHHHHh---CCEEEEEcCCCC
Confidence 389998753 456788899999987 578889999983
No 346
>PRK08564 5'-methylthioadenosine phosphorylase II; Reviewed
Probab=24.19 E-value=6.1e+02 Score=24.98 Aligned_cols=21 Identities=19% Similarity=0.123 Sum_probs=14.4
Q ss_pred HHHHHHHHHCCCeEEEEeCch
Q 010305 408 PEALEKWHSLGTKVYIYSSGS 428 (513)
Q Consensus 408 ~~~L~~L~~~G~~l~i~Tn~~ 428 (513)
+.-+..|+..|++..|.||..
T Consensus 73 ~a~i~aLk~LGvk~iI~tnav 93 (267)
T PRK08564 73 RANIWALKELGVEWVIAVSAV 93 (267)
T ss_pred hHHHHHHHHCCCcEEEEeccc
Confidence 344666777777777777754
No 347
>PLN02704 flavonol synthase
Probab=24.09 E-value=83 Score=32.13 Aligned_cols=36 Identities=33% Similarity=0.370 Sum_probs=28.3
Q ss_pred eeeeecCCC-CchHHHHHHHHHHhhCCCceEEEEcCCcce
Q 010305 173 VVPIIENTA-YENELTDSLAKAIDAYPKATAVLVRNHGIY 211 (513)
Q Consensus 173 ~vpv~~~~~-~~~~la~~v~~~l~~~~~~~~vll~nHG~~ 211 (513)
.||+|+... ...++++.+.+++++ .-.+.+.|||+=
T Consensus 42 ~iPvIDls~~~~~~~~~~l~~Ac~~---~GFf~l~nHGI~ 78 (335)
T PLN02704 42 QVPTIDLSDPDEEKLTRLIAEASKE---WGMFQIVNHGIP 78 (335)
T ss_pred CCCeEECCCccHHHHHHHHHHHHHH---cCEEEEEcCCCC
Confidence 499999753 445678888889887 578899999984
No 348
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=24.07 E-value=3.6e+02 Score=24.44 Aligned_cols=75 Identities=17% Similarity=0.268 Sum_probs=42.4
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccce--eeecccCCCCCHHHHHHHHHHcCCCCCCcEEE
Q 010305 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG--FFDTAVGNKRETPSYVEITNSLGVDKPSEILF 482 (513)
Q Consensus 405 pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~--i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~ 482 (513)
+=+.++++.+.+.|.+++++-+++.... ...+.+ ...+.. ++....++. +++-...+++.++-. .-++++
T Consensus 35 dl~~~l~~~~~~~~~~ifllG~~~~~~~-~~~~~l-----~~~yP~l~ivg~~~g~f-~~~~~~~i~~~I~~~-~pdiv~ 106 (172)
T PF03808_consen 35 DLFPDLLRRAEQRGKRIFLLGGSEEVLE-KAAANL-----RRRYPGLRIVGYHHGYF-DEEEEEAIINRINAS-GPDIVF 106 (172)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHHHHH-----HHHCCCeEEEEecCCCC-ChhhHHHHHHHHHHc-CCCEEE
Confidence 3456788888888999999998876433 222222 111111 222111111 455566666666655 557888
Q ss_pred EecCh
Q 010305 483 VTDVY 487 (513)
Q Consensus 483 VGDs~ 487 (513)
||=..
T Consensus 107 vglG~ 111 (172)
T PF03808_consen 107 VGLGA 111 (172)
T ss_pred EECCC
Confidence 88554
No 349
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=23.44 E-value=69 Score=27.00 Aligned_cols=31 Identities=16% Similarity=-0.011 Sum_probs=25.4
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchHHHHHH
Q 010305 404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRL 434 (513)
Q Consensus 404 ~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~ 434 (513)
-+++.+.++.++++|.++..+|+.+......
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~~s~la~ 89 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVVGSTLAR 89 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCCChHHH
Confidence 4678999999999999999999986654443
No 350
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=23.18 E-value=4.9e+02 Score=23.94 Aligned_cols=86 Identities=6% Similarity=0.022 Sum_probs=45.2
Q ss_pred CHHHHHHHHHHC--CCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEE
Q 010305 406 DVPEALEKWHSL--GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFV 483 (513)
Q Consensus 406 g~~~~L~~L~~~--G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~V 483 (513)
-+..+++.|+++ ++++.|-|+.+.... ...+.+ .+.....+ .+=-.|....+.++.+. |+-++++
T Consensus 36 a~~~Li~~l~~~~p~~~illT~~T~tg~~-~~~~~~-----~~~v~~~~----~P~D~~~~~~rfl~~~~---P~~~i~~ 102 (186)
T PF04413_consen 36 AARPLIKRLRKQRPDLRILLTTTTPTGRE-MARKLL-----PDRVDVQY----LPLDFPWAVRRFLDHWR---PDLLIWV 102 (186)
T ss_dssp HHHHHHHHHTT---TS-EEEEES-CCHHH-HHHGG------GGG-SEEE-------SSHHHHHHHHHHH-----SEEEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEEecCCchHH-HHHHhC-----CCCeEEEE----eCccCHHHHHHHHHHhC---CCEEEEE
Confidence 567889999887 788877777544332 222222 11122222 11114778888888864 7799999
Q ss_pred ecCh--hhHHHHHHcCCcEEEEe
Q 010305 484 TDVY--QEATAAKAAGKELFVIL 504 (513)
Q Consensus 484 GDs~--~Di~aA~~aG~~~i~v~ 504 (513)
+-.. +=+..|++.|+..++|.
T Consensus 103 EtElWPnll~~a~~~~ip~~LvN 125 (186)
T PF04413_consen 103 ETELWPNLLREAKRRGIPVVLVN 125 (186)
T ss_dssp S----HHHHHH-----S-EEEEE
T ss_pred ccccCHHHHHHHhhcCCCEEEEe
Confidence 8666 77888999999999886
No 351
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=22.36 E-value=4.4e+02 Score=29.83 Aligned_cols=79 Identities=18% Similarity=0.157 Sum_probs=49.8
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee--ecccCCCCCHHHHHHHHHHcCCCCCCc
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE 479 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~l~~l~~~~p~~ 479 (513)
++-+++...|+.|+++|+++..+|+..-+.+.-+.+.. +|-..=+.+. .+.. ...+.+.+ +..+..+ ++.
T Consensus 658 kLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs---~L~sR~q~ihv~~~v~---sr~dah~e-L~~lR~k-~~~ 729 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSS---RLFSRGQYIHVIRSVT---SRGDAHNE-LNNLRRK-TDC 729 (1051)
T ss_pred HHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhc---cceecCceEEEEEecC---CchHHHHH-HHHhhcC-CCc
Confidence 67789999999999999999999998877666555544 4433333322 2211 11223332 3344555 777
Q ss_pred EEEE-ecChh
Q 010305 480 ILFV-TDVYQ 488 (513)
Q Consensus 480 ~l~V-GDs~~ 488 (513)
|++| |+|..
T Consensus 730 aLvi~G~Sl~ 739 (1051)
T KOG0210|consen 730 ALVIDGESLE 739 (1051)
T ss_pred EEEEcCchHH
Confidence 8777 56653
No 352
>TIGR01101 V_ATP_synt_F vacuolar ATP synthase F subunit. This model describes the vacuolar ATP synthase F subunit (14 kDa subunit) in eukaryotes. In some archaeal species this protein subunit is referred as G subunit
Probab=22.35 E-value=2.2e+02 Score=24.21 Aligned_cols=63 Identities=3% Similarity=0.078 Sum_probs=46.8
Q ss_pred CCHHHHHHH-HHHCCCeEEEEeCchHHHHHHHHhccCCCCcccccceee---ecccCCCCCHHHHHHHHHHc
Q 010305 405 DDVPEALEK-WHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---DTAVGNKRETPSYVEITNSL 472 (513)
Q Consensus 405 pg~~~~L~~-L~~~G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~---~~~~~~KP~p~~~~~~l~~l 472 (513)
+.+.+.+++ |.+..+-+.++|..-.......+++. . ..+..++ +...+..|..+...+-.+++
T Consensus 46 eei~~~~~~~l~~~digIIlIte~~a~~i~~~I~~~---~--~~~PaIieIP~k~~~y~~~~d~i~~~~~~~ 112 (115)
T TIGR01101 46 SEIEDCFNRFLKRDDIAIILINQHIAEMIRHAVDAH---T--RSIPAVLEIPSKDHPYDASKDSILRRARGM 112 (115)
T ss_pred HHHHHHHHHHhhcCCeEEEEEcHHHHHHhHHHHHhc---C--CcCCEEEEECCCCCCCCCcccHHHHHHHHH
Confidence 467888888 77788999999999888888888876 3 4455666 44567778777777655543
No 353
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.
Probab=22.31 E-value=3.5e+02 Score=28.67 Aligned_cols=63 Identities=21% Similarity=0.142 Sum_probs=40.8
Q ss_pred CeEEEEeCchHHHHHHHHhccCCCCcc-cccceee-ecccCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 010305 419 TKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSEILFVT 484 (513)
Q Consensus 419 ~~l~i~Tn~~~~~~~~~l~~~~~~gl~-~~fd~i~-~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VG 484 (513)
.+++|+|+.+......+++.+ .-. +.+..++ .....+.-.+.-+..+++.++-.+.-+++.|+
T Consensus 130 ~~i~vits~~~aa~~D~~~~~---~~r~p~~~~~~~~~~vQG~~a~~~i~~al~~~~~~~~~dviii~ 194 (432)
T TIGR00237 130 KRVGVITSQTGAALADILHIL---KRRDPSLKVVIYPTLVQGEGAVQSIVESIELANTKNECDVLIVG 194 (432)
T ss_pred CEEEEEeCCccHHHHHHHHHH---HhhCCCceEEEecccccCccHHHHHHHHHHHhhcCCCCCEEEEe
Confidence 479999999999888888876 332 2344433 33334445566777777777653124778874
No 354
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=22.28 E-value=80 Score=31.29 Aligned_cols=16 Identities=31% Similarity=0.856 Sum_probs=13.9
Q ss_pred CeEEEEcccccccccc
Q 010305 284 PRCIVLDIEGTTTPIS 299 (513)
Q Consensus 284 ikavlFDlDGTL~d~~ 299 (513)
.++++||+||||.+..
T Consensus 158 ~~~~~~D~dgtl~~~~ 173 (300)
T PHA02530 158 PKAVIFDIDGTLAKMG 173 (300)
T ss_pred CCEEEEECCCcCcCCC
Confidence 4799999999999864
No 355
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=22.24 E-value=1.2e+02 Score=27.00 Aligned_cols=26 Identities=15% Similarity=0.239 Sum_probs=22.9
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchH
Q 010305 404 FDDVPEALEKWHSLGTKVYIYSSGSR 429 (513)
Q Consensus 404 ~pg~~~~L~~L~~~G~~l~i~Tn~~~ 429 (513)
.+.+.++++.++++|+++.+.||...
T Consensus 74 ~~~l~~ll~~lk~~Gl~i~l~Tg~~~ 99 (147)
T TIGR02826 74 REALLSLLKIFKEKGLKTCLYTGLEP 99 (147)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 36789999999999999999999754
No 356
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=22.20 E-value=7.3e+02 Score=24.44 Aligned_cols=76 Identities=20% Similarity=0.208 Sum_probs=48.3
Q ss_pred CCeEEEEeCchHHHHHHHHhccCCCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcC
Q 010305 418 GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAG 497 (513)
Q Consensus 418 G~~l~i~Tn~~~~~~~~~l~~~~~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG 497 (513)
-+.++|+|.++.+.-.++++.+.--||. |--......-+|..|+. .++++ +|..-+..|++.|.++|
T Consensus 36 ~VEVVllSRNspdTGlRv~nSI~hygL~-----ItR~~ft~G~~~~~Yl~---af~v~-----LFLSan~~DV~~Ai~~G 102 (264)
T PF06189_consen 36 LVEVVLLSRNSPDTGLRVFNSIRHYGLD-----ITRAAFTGGESPYPYLK---AFNVD-----LFLSANEDDVQEAIDAG 102 (264)
T ss_pred ceEEEEEecCCHHHHHHHHHhHHHhCCc-----ceeeeecCCCCHHHHHH---HhCCc-----eEeeCCHHHHHHHHHcC
Confidence 4778999988877655665543111442 21111111223444544 56776 88888899999999999
Q ss_pred CcEEEEecC
Q 010305 498 KELFVILDG 506 (513)
Q Consensus 498 ~~~i~v~~G 506 (513)
+....|.-.
T Consensus 103 ~~Aa~v~~~ 111 (264)
T PF06189_consen 103 IPAATVLPS 111 (264)
T ss_pred CCcEEeecC
Confidence 998877643
No 357
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=22.07 E-value=83 Score=26.57 Aligned_cols=32 Identities=9% Similarity=0.094 Sum_probs=26.2
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHH
Q 010305 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRL 434 (513)
Q Consensus 403 ~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~ 434 (513)
--+.+.++++.+|++|.++..+|+.+......
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~ 90 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTLAK 90 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCchhh
Confidence 34789999999999999999999986654433
No 358
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=21.72 E-value=3.1e+02 Score=26.66 Aligned_cols=79 Identities=10% Similarity=0.162 Sum_probs=49.5
Q ss_pred CCeEEEEeCchHH---HHHHHHhcc-CCCCcccccceee-ecccCCCCCHHHHHHHHHHcCCCCCCcEEEEecCh--hhH
Q 010305 418 GTKVYIYSSGSRL---AQRLIFGNS-NYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVY--QEA 490 (513)
Q Consensus 418 G~~l~i~Tn~~~~---~~~~~l~~~-~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~--~Di 490 (513)
++.+.++|++..- .++...... . .+.+ |.++ -+-....|-|.--..++...+++ |++|||.+ .+-
T Consensus 30 dI~vrv~gsGaKm~pe~~e~~~~~~~~--~~~p--df~I~isPN~~~PGP~~ARE~l~~~~iP----~IvI~D~p~~k~k 101 (276)
T PF01993_consen 30 DIDVRVVGSGAKMGPEDVEEVVTKMLK--EWDP--DFVIVISPNAAAPGPTKAREMLSAKGIP----CIVISDAPTKKAK 101 (276)
T ss_dssp SEEEEEEEEET--SHHHHHHHHHHHHH--HH----SEEEEE-S-TTSHHHHHHHHHHHHSSS-----EEEEEEGGGGGGH
T ss_pred CceEEEeccCCCCCHHHHHHHHHHHHH--hhCC--CEEEEECCCCCCCCcHHHHHHHHhCCCC----EEEEcCCCchhhH
Confidence 6889999988632 222222111 0 1222 3333 33456678888889999998986 99999998 467
Q ss_pred HHHHHcCCcEEEEe
Q 010305 491 TAAKAAGKELFVIL 504 (513)
Q Consensus 491 ~aA~~aG~~~i~v~ 504 (513)
+.-.+.|+..|.+.
T Consensus 102 d~l~~~g~GYIivk 115 (276)
T PF01993_consen 102 DALEEEGFGYIIVK 115 (276)
T ss_dssp HHHHHTT-EEEEET
T ss_pred HHHHhcCCcEEEEe
Confidence 77888899988875
No 359
>PRK08931 5'-methylthioadenosine phosphorylase; Provisional
Probab=21.34 E-value=8.3e+02 Score=24.42 Aligned_cols=20 Identities=10% Similarity=0.140 Sum_probs=14.8
Q ss_pred HHHHHHHHCCCeEEEEeCch
Q 010305 409 EALEKWHSLGTKVYIYSSGS 428 (513)
Q Consensus 409 ~~L~~L~~~G~~l~i~Tn~~ 428 (513)
.-+..||..|++..|+||..
T Consensus 70 Ani~alk~lGv~~ii~tnA~ 89 (289)
T PRK08931 70 ANIDALKRAGVTDIVSLSAC 89 (289)
T ss_pred HHHHHHHHcCCCEEEEeccc
Confidence 35667777888888888874
No 360
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=21.29 E-value=77 Score=31.07 Aligned_cols=29 Identities=14% Similarity=0.269 Sum_probs=25.6
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchH
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSR 429 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~ 429 (513)
..-||+..++++.|+++|+++.+..+...
T Consensus 62 ~~~Fpdp~~~i~~l~~~g~~~~~~~~P~v 90 (265)
T cd06589 62 AGKFPNPKSMIDELHDNGVKLVLWIDPYI 90 (265)
T ss_pred hhhCCCHHHHHHHHHHCCCEEEEEeChhH
Confidence 35799999999999999999999888754
No 361
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=21.20 E-value=1e+02 Score=28.51 Aligned_cols=79 Identities=11% Similarity=0.137 Sum_probs=29.8
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhccC--CCCcccccceeeecccCCCCCHHHHHHHHHHcCCCCCCc
Q 010305 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN--YGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 479 (513)
Q Consensus 402 ~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~~--~~gl~~~fd~i~~~~~~~KP~p~~~~~~l~~l~~~~p~~ 479 (513)
.++| .+|..++++|++++++...-.+..-....++. ...+...||.++-. + +.-..-+.++|++ +++
T Consensus 105 ElWP---nll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~~l~~f~~i~aq------s-~~da~r~~~lG~~-~~~ 173 (186)
T PF04413_consen 105 ELWP---NLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRPLLSRFDRILAQ------S-EADAERFRKLGAP-PER 173 (186)
T ss_dssp ---H---HHHHH-----S-EEEEEE--------------HHHHHHGGG-SEEEES------S-HHHHHHHHTTT-S---S
T ss_pred ccCH---HHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHHHHHhCCEEEEC------C-HHHHHHHHHcCCC-cce
Confidence 4555 57888889999999987664432222222110 00234556777611 1 2234567789997 999
Q ss_pred EEEEecChhhHH
Q 010305 480 ILFVTDVYQEAT 491 (513)
Q Consensus 480 ~l~VGDs~~Di~ 491 (513)
+...||--.|..
T Consensus 174 v~v~GnlKfd~~ 185 (186)
T PF04413_consen 174 VHVTGNLKFDQA 185 (186)
T ss_dssp EEE---GGG---
T ss_pred EEEeCcchhccc
Confidence 999999877753
No 362
>PLN02485 oxidoreductase
Probab=21.20 E-value=1.1e+02 Score=31.13 Aligned_cols=23 Identities=39% Similarity=0.510 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCcc
Q 010305 185 ELTDSLAKAIDAYPKATAVLVRNHGI 210 (513)
Q Consensus 185 ~la~~v~~~l~~~~~~~~vll~nHG~ 210 (513)
++++.|.+++++ .-.+.+.|||+
T Consensus 33 ~~~~~l~~Ac~~---~GFf~l~nHGi 55 (329)
T PLN02485 33 EVVRQLDKACRD---AGFFYVKGHGI 55 (329)
T ss_pred HHHHHHHHHHHH---CCEEEEECCCC
Confidence 478888888887 57889999997
No 363
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=20.83 E-value=3.5e+02 Score=25.41 Aligned_cols=42 Identities=14% Similarity=0.124 Sum_probs=33.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEEecChhhHHHHHHcCCcEEEEecC
Q 010305 458 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGKELFVILDG 506 (513)
Q Consensus 458 ~KP~p~~~~~~l~~l~~~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~G 506 (513)
...+|.-+...+.+.. ++|+.+.+..-.|...|++++.+.|.
T Consensus 244 ~~~~~~~~~~~~~~~~-------~~Is~RlH~~I~a~~~g~P~i~i~y~ 285 (286)
T PF04230_consen 244 YSLSPDELLELISQAD-------LVISMRLHGAILALSLGVPVIAISYD 285 (286)
T ss_pred CCCCHHHHHHHHhcCC-------EEEecCCHHHHHHHHcCCCEEEEecC
Confidence 3446666766666433 69999999999999999999999875
No 364
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=20.50 E-value=60 Score=30.06 Aligned_cols=15 Identities=27% Similarity=0.390 Sum_probs=12.9
Q ss_pred CeEEEEccccccccc
Q 010305 284 PRCIVLDIEGTTTPI 298 (513)
Q Consensus 284 ikavlFDlDGTL~d~ 298 (513)
.++|+||-||||...
T Consensus 5 ~k~lflDRDGtin~d 19 (181)
T COG0241 5 QKALFLDRDGTINID 19 (181)
T ss_pred CcEEEEcCCCceecC
Confidence 679999999999743
No 365
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=20.01 E-value=4e+02 Score=32.05 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=34.5
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhcc
Q 010305 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (513)
Q Consensus 401 ~~~~pg~~~~L~~L~~~G~~l~i~Tn~~~~~~~~~l~~~ 439 (513)
-++-+||.+.|+.|+++|+|+.++|+-..+.+..+--.+
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC 688 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSC 688 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhh
Confidence 378899999999999999999999999888777776666
Done!