Query 010307
Match_columns 513
No_of_seqs 149 out of 204
Neff 6.4
Searched_HMMs 46136
Date Thu Mar 28 22:59:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010307.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010307hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2622 Putative myrosinase pr 100.0 9E-108 2E-112 825.0 25.6 482 1-512 1-510 (510)
2 PF08217 DUF1712: Fungal domai 100.0 9.7E-83 2.1E-87 698.0 36.5 467 15-510 1-604 (604)
3 PF03164 Mon1: Trafficking pro 98.8 7E-05 1.5E-09 80.5 37.0 171 44-234 32-213 (415)
4 KOG0997 Uncharacterized conser 97.5 0.23 5E-06 53.7 33.2 172 42-234 136-319 (523)
5 KOG2622 Putative myrosinase pr 97.4 5.3E-05 1.1E-09 79.0 0.8 170 305-491 286-477 (510)
6 PF04099 Sybindin: Sybindin-li 95.3 0.56 1.2E-05 43.1 13.6 121 14-149 3-141 (142)
7 KOG3368 Transport protein part 90.5 4.7 0.0001 36.6 11.1 96 45-149 35-137 (140)
8 KOG3369 Transport protein part 49.0 70 0.0015 30.7 7.1 72 41-120 92-166 (199)
9 COG3266 DamX Uncharacterized p 28.0 92 0.002 31.9 4.6 38 466-503 235-272 (292)
10 PF09144 YpM: Yersinia pseudot 25.2 93 0.002 26.4 3.5 29 456-489 13-41 (117)
11 PF14593 PH_3: PH domain; PDB: 21.9 4.3E+02 0.0093 23.1 7.2 66 401-506 37-103 (104)
12 COG1021 EntE Peptide arylation 20.8 55 0.0012 35.6 1.7 44 43-91 329-373 (542)
13 PRK11901 hypothetical protein; 20.4 1.7E+02 0.0037 30.7 5.1 38 466-503 269-306 (327)
No 1
>KOG2622 consensus Putative myrosinase precursor [Defense mechanisms]
Probab=100.00 E-value=8.8e-108 Score=825.02 Aligned_cols=482 Identities=53% Similarity=0.814 Sum_probs=451.0
Q ss_pred CCCCCCCCCCCC-----------eE-EEEEcCCCCCCCccccCcEEEEcCCCCChhhhhhhhhHHHHHHHhhhccCCCcc
Q 010307 1 MGLASASTATDG-----------MQ-LCIFDLRRGQNEGQELDKILFFFPADLPFSTQLSVIGLSEGLITFTRIFSPEAA 68 (513)
Q Consensus 1 ~~~~~~~~~~~~-----------~~-f~Ifnp~~g~~Eg~e~~kILfY~P~~~~~n~ql~~IGL~egiv~Ft~~Fs~~~~ 68 (513)
|||+|+.++.|+ |. ||||||++|++||+|++|||||||++...++|++.|||+||+|+||++|+|+.+
T Consensus 1 m~~as~~sg~~~scsq~~qF~~~L~~ffv~~pr~G~~EGqE~nkIlffhP~~~~~~~q~~viGl~EalV~FTr~Fspe~~ 80 (510)
T KOG2622|consen 1 MAMASMSSGNEPSCSQEKQFPPALRSFFVFDPRRGQREGQELNKILFFHPNDLEFSTQLSVIGLSEALVTFTRLFSPEAA 80 (510)
T ss_pred CcccccCCCCCccccccccccHHHHHHhhcCcccCcccchhhceeEEECCCccchhhheehhhHHHHHHHHHHhcCcchh
Confidence 899999998888 65 899999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecceEEEEEEecCCeEEEEEEEcCCCC--------------CchhhHHHHHHHHHHHHHHHHHhccchhHhhhcC
Q 010307 69 CEIIEAERHSHVFYEAETDIWMVMVVEKGKDS--------------DAIWRIDALRKVLKEVHSLFVMFYGSIRAMLEKD 134 (513)
Q Consensus 69 ~~~I~T~k~~~v~~e~Ep~~wm~~~v~k~~~~--------------~~~i~~~~l~~~L~~~Y~~F~Lf~Gsf~~~l~~~ 134 (513)
|+++|+++++++++++||++||||++++.+.- +.+.-..+++++|++||+||+||+|+|+.....
T Consensus 81 ~~v~e~e~~~~ff~e~e~~~wmVmvv~~~~~~~~~~~i~k~~~~~~e~~ll~~~~~s~lr~~y~m~~lF~Gtf~~s~~~- 159 (510)
T KOG2622|consen 81 CEVIEAERHSHFFYEAEPDIWMVMVVEKNKEIEAQWRIDKLRRVLKEVHLLFVMFSSSLRALYEMEPLFTGTFSRSHLY- 159 (510)
T ss_pred hhhhhhcccccccccCCCceEEEEEEeeCChhheeeecchhHHHhhhhHHHHHHHHHHHHHHHHhchhhcCCcchhhcC-
Confidence 99999999999999999999999999865421 234457889999999999999999999988875
Q ss_pred CChhHHHHhhhHHHHHhhhcCcCCcccCCCCCCchhhccCCcceeccCchhHHHHHHHHHHHHhhhCCCceEEEEEecCc
Q 010307 135 PSGGLIRSHLYPFIMDYLSDFPVGKKLQLPSFRDCLKERGTVQMLTMGREAAIEVQSLVSVLDSCAGNSSCYSMILFHDL 214 (513)
Q Consensus 135 ~~~~~L~~~L~~F~~~yl~~~~~~~~l~l~~~~d~l~~~~gi~~lpl~k~~~L~iqs~in~l~~~f~~~i~~~~~Ly~d~ 214 (513)
+....+++||+.||.+|++...+. .||.++.++||+||||++.+||+||+|||.++++++ .+||++|||+|+
T Consensus 160 ~~I~~~keRLdfFf~kylqll~~~-------~~dlLd~~GgV~fl~l~~~tyL~VqSlv~~l~e~~~-v~~~smfLyqD~ 231 (510)
T KOG2622|consen 160 PFITDYKERLDFFFGKYLQLLHFR-------SCDLLDERGGVQFLTLARDTYLEVQSLVNVLDECAG-VRCHSMFLYQDL 231 (510)
T ss_pred chHHHHHHHHHHHHHhhccccccc-------ccchhhhcCCEEEEEcCcchhHHHHHHHHHHHHhhC-hhhhhhhhhhhh
Confidence 678899999999999999976555 789999999999999999999999999999999999 999999999999
Q ss_pred ccccCCCchhHHHHHHHHhhccCCCCcCCCCCcccccccCCCccccccCCCcCCCCCcccccccCCCCCCC--CCccccc
Q 010307 215 LVSTTLSPDDTINLFTYAVLRLSPNALSSGVNSWSYIRRGSTSSHFVSGSALTHSGPVSEQIYHSSDTSPV--GNNINRV 292 (513)
Q Consensus 215 Li~S~L~~~d~~~Ly~YL~~~l~p~~~~~e~~~~~~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~~~~~ 292 (513)
|||++|+++||.+||+||+++|+|+++++|+++|||+|||..++.. +.++..+.|+|+.+.+|. |++..++
T Consensus 232 Lv~t~Ls~dD~~~Lf~ylt~~L~p~~lsp~~~~~~~~~kGr~s~~~-------s~~st~ap~lG~~~t~~~~~~s~~g~~ 304 (510)
T KOG2622|consen 232 LVSTTLSQDDTVDLFKYLTMRLTPRALSPETSSWSYLRKGRGSPII-------SSRSTNAPHLGSFLTLPSHNGSDQGTV 304 (510)
T ss_pred hheeccCcccHHHHHHHHHhhccccccCCCccchhhhhcCCCCCCc-------ccCCCCCcccccccccccccCCccccc
Confidence 9999999999999999999999999999999999999999854444 344567788999988774 4668899
Q ss_pred cccccccccccCCCceeeecccCccCCCcccCCCEEEeccCCceeEEEEEeccCcEEEEEeeCCcccchhhhHHHHHHHH
Q 010307 293 TRALQHGKWYKGKDGFLVTDIWGVDVGSLVCATPTVWLQQTEEAMYLCPYQFKSLTLILLIPVSSILNGEQGVALVKQQL 372 (513)
Q Consensus 293 ~~~~~~~~~~~~~~G~~~t~~~~~~~~~~~~~~P~V~l~~~~e~~~L~vY~~~~~tl~l~i~~~~~~~~~~~~~~l~~~L 372 (513)
+||+|.++|-++++||+.|+.|+++ .+|.|+.+...+++|+++|+.++.|++++.+...+++++..+.+.++|.
T Consensus 305 ~~~~~~d~~~~~~~~f~~Td~~~~e------~~~~il~~~~~~~~~~~~~a~~s~tlv~~rrl~~iV~~~L~i~~s~~~~ 378 (510)
T KOG2622|consen 305 IRPLQPDKWCKGKDGFLNTDIWGLE------ALPTILYQATQEAVYLLIYASKSLTLVLLRRLDAIVNGQLTISASKQQV 378 (510)
T ss_pred ccccCCCceeeeccceeeeeeeccc------cccchhhhhhhhHHHHHhhcccCcceeeeehhhhhcCcceeehhhhHHH
Confidence 9999999999999999999999988 5799999988999999999999999999999999999987888999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCceeEEEEcCcccccccCCCCCcccCCHHHHHHHHHHHHHHHHHhhhhccCCC
Q 010307 373 LENASLKILKVEEKLSKGWGGENAYHVSGYRYLLVDGDRNISRASPPGKVTTLAKESLLALSKLRDEVDLEKSRAKRDNA 452 (513)
Q Consensus 373 ~~~~s~~i~~~~~~~~~~~~~~~~~~~~~~ryiy~n~~~~a~r~s~~~~~~~l~~e~l~~l~~l~~ei~~~~s~~~~~~~ 452 (513)
.++++..|.+.++..+.+|.+.||+|.++|||+..++..-++|++|+++++++.|| .++|+|++|++++++|++
T Consensus 379 ~~n~~~r~~k~ee~p~f~~iyfN~~h~s~~~~ll~~~~~~v~rssps~~ltt~~p~--~~lnkl~~dv~S~f~r~~---- 452 (510)
T KOG2622|consen 379 IENASKRILKSEEEPSFGWIYFNAYHMSGYRYLLVDNDTVVSRSSPSGKLTTLAPE--LALNKLREDVDSEFTRVK---- 452 (510)
T ss_pred HhcccchhccCcccCccceeeecchhccceeeeeccCCceeeccCCCcceeecCCh--HHHHHHHHhhhccccccc----
Confidence 99999999999999999999999999999999999999999999999999999999 678999999999999987
Q ss_pred CCCCcceEEEEecCCeEEEEEeeCCEEEEEEEecCCccHHhHHHHHHHHHHhhcCCcccc
Q 010307 453 GCEKDLEVSIRAKNNAWAIARITGGKELYMVLEKASETLLYASDAVEKFSNRYCNGAFSL 512 (513)
Q Consensus 453 ~~~~~~Ei~vKt~~d~WVv~k~s~~Relyvvl~~k~~tL~~v~~ev~k~~~~~f~gif~~ 512 (513)
++|+|||||++|||||||||+|+|++||||++||+||+||++||+|||++||+|||||
T Consensus 453 --eed~Ei~Vka~sd~WVV~kk~~~r~lymil~~~n~tL~dv~~~v~~~~~~~f~~iFf~ 510 (510)
T KOG2622|consen 453 --EEDMEICVKAKSDYWVVAKKSRGRELYMILEKKNATLLDVTDEVKRFSNRYFSGIFFM 510 (510)
T ss_pred --cccceeEEEecCcEEEEEEecCCceEEEEEcCCcchhhhhHHHHHHHHHHhhhccccC
Confidence 6899999999999999999999999999999999999999999999999999999996
No 2
>PF08217 DUF1712: Fungal domain of unknown function (DUF1712); InterPro: IPR013176 The function of this fungal family of proteins is unknown.
Probab=100.00 E-value=9.7e-83 Score=698.05 Aligned_cols=467 Identities=31% Similarity=0.469 Sum_probs=395.7
Q ss_pred EEEEcCCCCCCCccccCcEEEEcCC---CCChhhhhhhhhHHHHHHHhhhccCCCccceEEEecceEEEEEEecCCeEEE
Q 010307 15 LCIFDLRRGQNEGQELDKILFFFPA---DLPFSTQLSVIGLSEGLITFTRIFSPEAACEIIEAERHSHVFYEAETDIWMV 91 (513)
Q Consensus 15 f~Ifnp~~g~~Eg~e~~kILfY~P~---~~~~n~ql~~IGL~egiv~Ft~~Fs~~~~~~~I~T~k~~~v~~e~Ep~~wm~ 91 (513)
||||||++|++||+|++|||||||+ ++++|+|+++|||+||||+||++|+++++|++|||+|+++++++|||+|||+
T Consensus 1 ~~Ifnps~g~~E~ee~~kILfY~p~~~~~~~~neql~~IGL~qglv~Ft~~Fs~~~~~~~I~T~K~r~v~~e~Ep~~Wi~ 80 (604)
T PF08217_consen 1 FFIFNPSLGQKEGEEHKKILFYYPFEESETSLNEQLRQIGLAQGLVSFTRTFSPDDPCDSIHTEKSRIVFYEPEPGFWIV 80 (604)
T ss_pred CEEECCCCCCCcccccceEEEEecCCccCCCHHHHHHHhhHHHHHHHHHHhcCCCCcccceeecceEEEEEEecCCEEEE
Confidence 7999999999999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCC-CchhhHHHHHHHHHHHHHHHHHhccchhHhhhcCCChhHHHHhhhHHHHHhhhcCcCCcccCCCCCCchh
Q 010307 92 MVVEKGKDS-DAIWRIDALRKVLKEVHSLFVMFYGSIRAMLEKDPSGGLIRSHLYPFIMDYLSDFPVGKKLQLPSFRDCL 170 (513)
Q Consensus 92 ~~v~k~~~~-~~~i~~~~l~~~L~~~Y~~F~Lf~Gsf~~~l~~~~~~~~L~~~L~~F~~~yl~~~~~~~~l~l~~~~d~l 170 (513)
|+|+.++.. ....+...|+++|++||++|+||||+|+.+++ +++.|+.+|++||.+||++ |++++.+|++
T Consensus 81 l~I~~~~~~~~~~~~~~~L~~~L~~~Y~~F~L~hGsfs~~l~---~r~~L~~~L~~F~~~fl~~------l~l~~~~~~~ 151 (604)
T PF08217_consen 81 LSINLPKEQSTKDGPEQYLLSVLKQAYSMFRLFHGSFSSLLE---GREKLKDRLEDFFSRFLQT------LNLPPQCDIL 151 (604)
T ss_pred EEEecCcCCccccchHHHHHHHHHHHHHHHHHHcCCHHHhcc---cHHHHHHHHHHHHHHHHHh------hcccccchHH
Confidence 999744321 12345667999999999999999999999997 6889999999999999987 4545588999
Q ss_pred hccCCc---------------------ceeccCchhHHHHH---------------HHHHHHHhhhCCCce-EEEEEecC
Q 010307 171 KERGTV---------------------QMLTMGREAAIEVQ---------------SLVSVLDSCAGNSSC-YSMILFHD 213 (513)
Q Consensus 171 ~~~~gi---------------------~~lpl~k~~~L~iq---------------s~in~l~~~f~~~i~-~~~~Ly~d 213 (513)
+.|+|| |++||++..||+|| +||+.++++|+ .++ ++++||++
T Consensus 152 ~~~~~v~~~~~~~~~~~~~~~we~~i~q~l~l~~~~yL~i~di~vy~~p~~~~k~y~~i~~~~~~f~-~i~~~s~~ly~~ 230 (604)
T PF08217_consen 152 DGFGGVLWPDSFKVAEFEDKSWESSIKQFLPLDKESYLGIQDILVYHLPKSNIKTYGFIRNFESTFP-SIPCYSNWLYHD 230 (604)
T ss_pred HHhCCcccccccchhccccchhhhhhhhccccCchhhcCceeeeEecccccccccccHHHHHHhhcc-cccceeeeEEcC
Confidence 999999 99999999999999 99999999999 666 99999999
Q ss_pred cccccCCCchh---------------------HHHHHHHHhhccCCCCcCCCCCcccccccCCCccccccCCCcCCCCCc
Q 010307 214 LLVSTTLSPDD---------------------TINLFTYAVLRLSPNALSSGVNSWSYIRRGSTSSHFVSGSALTHSGPV 272 (513)
Q Consensus 214 ~Li~S~L~~~d---------------------~~~Ly~YL~~~l~p~~~~~e~~~~~~~r~g~~~~~~~~~~~~~~~~~~ 272 (513)
+++|++|+++| ++.||+|++..++|....+|+..|+|+|++.+.....+.+
T Consensus 231 ~lv~~~Ls~~~l~~~~~y~e~~~~~~~~~~~~~~~l~n~~~~~~~~~~~~~ev~~~t~i~~s~s~~~~~~~~-------- 302 (604)
T PF08217_consen 231 HLVYSGLSSHDLAGNVHYKEQLSDEENTTEQSTRILYNYTLPISFPYDAVSEVGSTTGIRNSMSLFMSYTPS-------- 302 (604)
T ss_pred EEEEcccCcccccccceeccccccccccccHHHHHHHHHhhcccchhhhhhhhccceeeccCCccccccCCC--------
Confidence 99999999999 9999999999999999999999999999999532211111
Q ss_pred ccccccCCCCCCCCCccccccccccccccccCCCceeeecccCccCCCcccCCCEEEecc----CCceeEEEEEeccC-c
Q 010307 273 SEQIYHSSDTSPVGNNINRVTRALQHGKWYKGKDGFLVTDIWGVDVGSLVCATPTVWLQQ----TEEAMYLCPYQFKS-L 347 (513)
Q Consensus 273 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~~~t~~~~~~~~~~~~~~P~V~l~~----~~e~~~L~vY~~~~-~ 347 (513)
.....+.++.+++..++.||.+ .+.||++.++...-.+.. .++++++|+- ..++|+|||||+++ +
T Consensus 303 ---~~~~s~~~~~~~~~~~~~~~~~------~~~gfLISP~~~~~lp~~-yk~~k~~l~~~~~~~~~~y~LlvY~~~~~l 372 (604)
T PF08217_consen 303 ---WNFRSGSSNNEDSNAKVNRPNQ------DRYGFLISPLPDIFLPES-YKIRKVYLPFNLDQKEEEYYLLVYRYLDVL 372 (604)
T ss_pred ---CccccCCCCCCCCccccccccc------cccccccccccccccccc-ccccccccccccCCcceeeEEEEEEECCcE
Confidence 0111122344444556666665 568888776655444333 2667777753 36799999999999 9
Q ss_pred EEEEEeeCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceeEEEEcCcccccccCCCCCcc----
Q 010307 348 TLILLIPVSSILNGEQGVALVKQQLLENASLKILKVEEKLSKGWGGENAYHVSGYRYLLVDGDRNISRASPPGKVT---- 423 (513)
Q Consensus 348 tl~l~i~~~~~~~~~~~~~~l~~~L~~~~s~~i~~~~~~~~~~~~~~~~~~~~~~ryiy~n~~~~a~r~s~~~~~~---- 423 (513)
|+|||+|..+..+..+++..|..+|.++++.....++++++++++++++.++++|||||||++|+++|+|+|.+++
T Consensus 373 tlcLf~~~~~~i~~~d~l~~L~~~L~pqls~L~~~I~e~~~k~~~~~~~~~~~~fkYiyfN~~nla~kSSip~~~~~~~~ 452 (604)
T PF08217_consen 373 TLCLFVPAFSKIWDQDFLKDLDAQLGPQLSQLASDIAEQLSKNWSGSNSSHESSFKYIYFNKMNLAIKSSIPLKSTSLTS 452 (604)
T ss_pred EEEEEecCccccccHHHHHHHHHHHHHhHHHHhhccccccccccccccCCCCCCceEEEEcCCCceeecCCCCCCccccc
Confidence 9999999866666666778888888877777777888999999988888999999999999999999999998663
Q ss_pred --cCCHHHHHHH-HHHH------------------HHHHHHhhhhccCCCCCCCcceEE---------------------
Q 010307 424 --TLAKESLLAL-SKLR------------------DEVDLEKSRAKRDNAGCEKDLEVS--------------------- 461 (513)
Q Consensus 424 --~l~~e~l~~l-~~l~------------------~ei~~~~s~~~~~~~~~~~~~Ei~--------------------- 461 (513)
.+++++|+++ +.|. .|++.++++++ ++.++..+.|+|
T Consensus 453 ~~~i~~~vL~li~~gid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~nfl~~~~~~kl~el~~e~l~~ 531 (604)
T PF08217_consen 453 SSSIPPNVLRLIVNGIDQTFQRNSSSSSNTNGYNLKEVTTEKSRSK-NDKSKEKDKEYCNFLDSMSNDKLWELNQELLQF 531 (604)
T ss_pred ccccccchHHHHHHhHHHHhhcccccccccccccCccCcccccccc-ccccchhhhhhhhhhhhcchhhHhhcCHHHHHH
Confidence 6788999987 3333 33444555665 444456678888
Q ss_pred ---------------EEecCCeEEEEEeeCCEEEEEEEecC---------CccHHhHHHHHHHHHHhhcCCcc
Q 010307 462 ---------------IRAKNNAWAIARITGGKELYMVLEKA---------SETLLYASDAVEKFSNRYCNGAF 510 (513)
Q Consensus 462 ---------------vKt~~d~WVv~k~s~~Relyvvl~~k---------~~tL~~v~~ev~k~~~~~f~gif 510 (513)
+||.||||||+|++|+||+|||+.++ +++++++.+|++|+|.++|+|||
T Consensus 532 l~~~~~s~~~~~Ee~l~~~~n~wl~~~~~~~~e~~vil~n~f~~~~~~~~~~~~~~l~~~~~k~~~~~~~~~~ 604 (604)
T PF08217_consen 532 LTDIQNSRKDIQEERLKTLNNGWLVYIKSNSRELYVILKNWFDDDDPSKKSSTLLDLFEELGKDVSRWWDNIF 604 (604)
T ss_pred HHHhhhccccchhhhheeeccEEEEEEecCCcEEEEEeeccccccccccCCcchHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999 99999999999999999999998
No 3
>PF03164 Mon1: Trafficking protein Mon1; InterPro: IPR004353 Members of this family have been called SAND proteins [] although these proteins do not contain a SAND domain. In Saccharomyces cerevisiae a protein complex of Mon1 and Ccz1 functions with the small GTPase Ypt7 to mediate vesicle trafficking to the vacuole [, ]. The Mon1/Ccz1 complex is conserved in eukaryotic evolution and members of this family (previously known as DUF254) are distant homologues to domains of known structure that assemble into cargo vesicle adapter (AP) complexes [, ].
Probab=98.79 E-value=7e-05 Score=80.47 Aligned_cols=171 Identities=19% Similarity=0.215 Sum_probs=118.9
Q ss_pred hhhhhhhhHHHHHHHhhhccCCCccceEEEecceEEEEEEecCCeEEEEEEEcCCCCCchhhHHHHHHHHHHHHHHHHHh
Q 010307 44 STQLSVIGLSEGLITFTRIFSPEAACEIIEAERHSHVFYEAETDIWMVMVVEKGKDSDAIWRIDALRKVLKEVHSLFVMF 123 (513)
Q Consensus 44 n~ql~~IGL~egiv~Ft~~Fs~~~~~~~I~T~k~~~v~~e~Ep~~wm~~~v~k~~~~~~~i~~~~l~~~L~~~Y~~F~Lf 123 (513)
+.=...+|.++||++|.+.- ++..+.|.+.+++++|+.-+| +|++++ .+.. + +...++..|...|......
T Consensus 32 ~~l~~~~g~~~aiiS~~~~~--~d~l~~i~~~~~~ivfl~r~p-l~lv~v-S~~~--e---~~~~l~~qL~~ly~qils~ 102 (415)
T PF03164_consen 32 DKLSSLMGVIQAIISFFQSN--GDELRSIRAGDHRIVFLNRGP-LILVAV-SKTG--E---SESQLRKQLDYLYSQILSI 102 (415)
T ss_pred HHHHHHHHHHHHHHHHHHhC--CCcEEEEEeCCEEEEEEecCC-EEEEEE-cCCc--C---CHHHHHHHHHHHHHHHHHh
Confidence 44568899999999999753 356889999999999987555 444442 2222 1 3678899999998877654
Q ss_pred cc--chhHhhhcCCC--hhHHHHhhhHHHHHhhhcCcCCcccCCCCCCch-hhccCCcceeccCchhHHHHHHHHHHHHh
Q 010307 124 YG--SIRAMLEKDPS--GGLIRSHLYPFIMDYLSDFPVGKKLQLPSFRDC-LKERGTVQMLTMGREAAIEVQSLVSVLDS 198 (513)
Q Consensus 124 ~G--sf~~~l~~~~~--~~~L~~~L~~F~~~yl~~~~~~~~l~l~~~~d~-l~~~~gi~~lpl~k~~~L~iqs~in~l~~ 198 (513)
=. .+..++++.++ ...+-.-.+.++..-+..++. +. --.+++++-+||.+..--+|.+.+..-..
T Consensus 103 lt~~~l~~~f~~r~n~DlR~lL~gtd~~~~~~~~~~~~----------~~~~~~~~~~~~l~l~~~~R~~i~~~l~~~~~ 172 (415)
T PF03164_consen 103 LTKPQLERIFEKRPNFDLRRLLGGTDRFLDSLLDSMNR----------SPPSFLLNALECLPLRPSIRDKITSILLSCLN 172 (415)
T ss_pred ccHHHHHHHhccCCCcchhhhccchHHHHHHHHHHhcC----------ChHHHHhhcceEEECCHHHHHHHHHHHHHhcc
Confidence 44 36777765433 333444445666666654322 22 12467999999998887777776443223
Q ss_pred hhCCCceEEEEEecCcccc------cCCCchhHHHHHHHHhh
Q 010307 199 CAGNSSCYSMILFHDLLVS------TTLSPDDTINLFTYAVL 234 (513)
Q Consensus 199 ~f~~~i~~~~~Ly~d~Li~------S~L~~~d~~~Ly~YL~~ 234 (513)
..+ .+.+++++.+++||. -+|.|.|+..|.+++..
T Consensus 173 ~~~-~llf~lL~~~~klv~~~~~k~~~L~~~Dl~lL~n~v~~ 213 (415)
T PF03164_consen 173 KRK-DLLFGLLFANNKLVSVVRPKKHSLHPSDLHLLFNLVRS 213 (415)
T ss_pred CCC-CcEEEEEEECCEEEEEEccCCCcCChHHHHHHHHHHhh
Confidence 444 677999999999988 47999999999999766
No 4
>KOG0997 consensus Uncharacterized conserved protein Sand [Function unknown]
Probab=97.48 E-value=0.23 Score=53.70 Aligned_cols=172 Identities=18% Similarity=0.209 Sum_probs=110.1
Q ss_pred ChhhhhhhhhHHHHHHHhhhccCCCccceEEEecceEEEEEEecCCeEEEEEEEcCCCCCchhhHHHHHHHHHHHHH-HH
Q 010307 42 PFSTQLSVIGLSEGLITFTRIFSPEAACEIIEAERHSHVFYEAETDIWMVMVVEKGKDSDAIWRIDALRKVLKEVHS-LF 120 (513)
Q Consensus 42 ~~n~ql~~IGL~egiv~Ft~~Fs~~~~~~~I~T~k~~~v~~e~Ep~~wm~~~v~k~~~~~~~i~~~~l~~~L~~~Y~-~F 120 (513)
+.+.-...+|.++|+|+|.+. ++ ....+|+|...+.+|++=-|=+.++++ ....+ ...|...|.-.|. +-
T Consensus 136 s~e~l~stmGv~~alISf~q~-~~-~~i~si~a~g~k~vfl~kspl~LvA~s--~t~~S-----a~qL~~qL~~ly~QIl 206 (523)
T KOG0997|consen 136 SDEALSSTMGVMQALISFFQV-SG-LAITSIHAFGNKLVFLQKSPLLLVAVS--RTSQS-----AAQLLQQLLLLYCQIL 206 (523)
T ss_pred cHHHHHHHHHHHHHHHHHHhh-CC-ceEEEEEecCceEEEEecCcEEEEEEc--ccccC-----HHHHHHHHHHHHHHHH
Confidence 445667889999999999875 23 458899999999999886665555553 22222 2334444444333 33
Q ss_pred HHhccc-hhHhhhcCCChhHHHHhh---hHHHHHhhhcCcCCcccCCCCCCchhh-ccCCcceeccCchhHHHHHHHHHH
Q 010307 121 VMFYGS-IRAMLEKDPSGGLIRSHL---YPFIMDYLSDFPVGKKLQLPSFRDCLK-ERGTVQMLTMGREAAIEVQSLVSV 195 (513)
Q Consensus 121 ~Lf~Gs-f~~~l~~~~~~~~L~~~L---~~F~~~yl~~~~~~~~l~l~~~~d~l~-~~~gi~~lpl~k~~~L~iqs~in~ 195 (513)
..+-++ ++.++++..+. .||..| |.++++-+..++- |.++ .++.|+-+|+....-..+++.+-.
T Consensus 207 S~LT~~ql~~if~~r~Nf-DLRrLL~gser~~~~ll~~~~~----------~~~~lllnsi~~lPl~~s~Rd~Ls~~l~~ 275 (523)
T KOG0997|consen 207 SILTASQLQRIFNKRQNF-DLRRLLSGSERLLDNLLDSMNR----------DPLVLLLNSIRCLPLNSSFRDQLSALLLS 275 (523)
T ss_pred HHHHHHHHHHHHhcccCc-hHHHHhcccHHHHHHHHHHHhh----------CcchhhhccceeccCChhHHHHHHHHHHH
Confidence 333333 66666542222 234333 4556666654322 2222 468999999999999999887544
Q ss_pred HHhhhCCCceEEEEEecCcccc------cCCCchhHHHHHHHHhh
Q 010307 196 LDSCAGNSSCYSMILFHDLLVS------TTLSPDDTINLFTYAVL 234 (513)
Q Consensus 196 l~~~f~~~i~~~~~Ly~d~Li~------S~L~~~d~~~Ly~YL~~ 234 (513)
=+...+ ...+++++-+++|+. -.|.|.|+..|++.+.+
T Consensus 276 ~l~~~~-~Llf~iliarnkLva~vr~kk~~LHp~DL~Llfnlvs~ 319 (523)
T KOG0997|consen 276 CLAKAK-GLLFGILIARNKLVAMVRAKKYLLHPADLHLLFNLVSR 319 (523)
T ss_pred hhccCC-ccEEEEEEeCCeeEEEEeccccccChhhHHHHHHHhcc
Confidence 223333 445788888888887 47899999999999654
No 5
>KOG2622 consensus Putative myrosinase precursor [Defense mechanisms]
Probab=97.37 E-value=5.3e-05 Score=79.03 Aligned_cols=170 Identities=21% Similarity=0.117 Sum_probs=98.9
Q ss_pred CCceeeecccCc----------cCCCcccCCCEEEeccC---CceeEEEEEeccCcEEEEEeeCCcccchhhh---HHHH
Q 010307 305 KDGFLVTDIWGV----------DVGSLVCATPTVWLQQT---EEAMYLCPYQFKSLTLILLIPVSSILNGEQG---VALV 368 (513)
Q Consensus 305 ~~G~~~t~~~~~----------~~~~~~~~~P~V~l~~~---~e~~~L~vY~~~~~tl~l~i~~~~~~~~~~~---~~~l 368 (513)
+.|.+.|+|... .......+.|+.++..+ .|+...++|++.+..+|++++++.-+++... .+.+
T Consensus 286 ~lG~~~t~~~~~~s~~g~~~~~~~~d~~~~~~~~f~~Td~~~~e~~~~il~~~~~~~~~~~~~a~~s~tlv~~rrl~~iV 365 (510)
T KOG2622|consen 286 HLGSFLTLPSHNGSDQGTVIRPLQPDKWCKGKDGFLNTDIWGLEALPTILYQATQEAVYLLIYASKSLTLVLLRRLDAIV 365 (510)
T ss_pred ccccccccccccCCcccccccccCCCceeeeccceeeeeeeccccccchhhhhhhhHHHHHhhcccCcceeeeehhhhhc
Confidence 478888888432 22233456788888877 3568889999999999999988766666542 5567
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceeEEEEc--Cccc--ccccCCCCCcccC-CHHHHHHHHHHHHHHHHH
Q 010307 369 KQQLLENASLKILKVEEKLSKGWGGENAYHVSGYRYLLVD--GDRN--ISRASPPGKVTTL-AKESLLALSKLRDEVDLE 443 (513)
Q Consensus 369 ~~~L~~~~s~~i~~~~~~~~~~~~~~~~~~~~~~ryiy~n--~~~~--a~r~s~~~~~~~l-~~e~l~~l~~l~~ei~~~ 443 (513)
.++|.-.++ +++.++ +.+++..|. ..+++++||||| +++. .+-+++...|..- |+-.++. ++-|++..
T Consensus 366 ~~~L~i~~s-~~~~~~-n~~~r~~k~--ee~p~f~~iyfN~~h~s~~~~ll~~~~~~v~rssps~~ltt---~~p~~~ln 438 (510)
T KOG2622|consen 366 NGQLTISAS-KQQVIE-NASKRILKS--EEEPSFGWIYFNAYHMSGYRYLLVDNDTVVSRSSPSGKLTT---LAPELALN 438 (510)
T ss_pred Ccceeehhh-hHHHHh-cccchhccC--cccCccceeeecchhccceeeeeccCCceeeccCCCcceee---cCChHHHH
Confidence 788877777 553332 333444443 346889999999 5542 2334455555322 3344433 44455544
Q ss_pred hhhhccCCCCCCCcceEEEEe-cCCeEEEEEeeCCEEEEEEEecCCccH
Q 010307 444 KSRAKRDNAGCEKDLEVSIRA-KNNAWAIARITGGKELYMVLEKASETL 491 (513)
Q Consensus 444 ~s~~~~~~~~~~~~~Ei~vKt-~~d~WVv~k~s~~Relyvvl~~k~~tL 491 (513)
+-+-+ -+.|.. |. .-|.=|+-|-.++- |||.-+.+..+
T Consensus 439 kl~~d-------v~S~f~-r~~eed~Ei~Vka~sd~--WVV~kk~~~r~ 477 (510)
T KOG2622|consen 439 KLRED-------VDSEFT-RVKEEDMEICVKAKSDY--WVVAKKSRGRE 477 (510)
T ss_pred HHHHh-------hhcccc-ccccccceeEEEecCcE--EEEEEecCCce
Confidence 44432 122221 22 35666666755553 44544333333
No 6
>PF04099 Sybindin: Sybindin-like family ; InterPro: IPR007233 Sybindin is a physiological syndecan-2 ligand on dendritic spines, the small protrusions on the surface of dendrites that receive the vast majority of excitatory synapses. Syndecan-2 induces spine formation by recruiting intracellular vesicles toward postsynaptic sites through the interaction with synbindin []. ; GO: 0006888 ER to Golgi vesicle-mediated transport, 0005801 cis-Golgi network; PDB: 3CUE_C 2J3T_C 2ZMV_B 2JSN_A.
Probab=95.27 E-value=0.56 Score=43.14 Aligned_cols=121 Identities=17% Similarity=0.221 Sum_probs=79.1
Q ss_pred EEEEEcCCCCCCCccccCcEEEEcCC---------CCChhhhhhhhhHHHHHHHhhhccCCC---------ccceEEEec
Q 010307 14 QLCIFDLRRGQNEGQELDKILFFFPA---------DLPFSTQLSVIGLSEGLITFTRIFSPE---------AACEIIEAE 75 (513)
Q Consensus 14 ~f~Ifnp~~g~~Eg~e~~kILfY~P~---------~~~~n~ql~~IGL~egiv~Ft~~Fs~~---------~~~~~I~T~ 75 (513)
+|+|||.. | ..+||+-- ....|+++..-|+.-+|-.|++..+|. ...+.++|.
T Consensus 3 slyI~nr~-G--------~lIy~~~~~~~~~~~~~~~~~ne~~ll~g~l~sl~~i~~klsp~~~~~~~~~~~g~~~~~T~ 73 (142)
T PF04099_consen 3 SLYIFNRS-G--------GLIYYREWNRSKNEGQPKLSSNEYKLLAGMLHSLKAIASKLSPVDSKPNEPGSSGFESFETD 73 (142)
T ss_dssp EEEEE-TT-S---------EEEEEETSSSS--E-SSSCHHHHHHHHHHHHHHHHHHHHT-SSSSSS-SSS--SEEEEEES
T ss_pred EEEEEeCC-c--------ceeeehhhCCCCccccCCCChhHHHHHHhhHHHHHHHHHHhCCCCcccccccceeEEEEEeC
Confidence 68899844 2 46666532 235799999999999999999999982 237899999
Q ss_pred ceEEEEEEecCCeEEEEEEEcCCCCCchhhHHHHHHHHHHHHHHHHHhccchhHhhhcCCChhHHHHhhhHHHH
Q 010307 76 RHSHVFYEAETDIWMVMVVEKGKDSDAIWRIDALRKVLKEVHSLFVMFYGSIRAMLEKDPSGGLIRSHLYPFIM 149 (513)
Q Consensus 76 k~~~v~~e~Ep~~wm~~~v~k~~~~~~~i~~~~l~~~L~~~Y~~F~Lf~Gsf~~~l~~~~~~~~L~~~L~~F~~ 149 (513)
..++-++|---|+++++.-.... .-....|+..+.+.|--|.+-|.-..- +..-..+.+..+|++++.
T Consensus 74 ~yklh~~eT~TGlKFvl~td~~~----~~~~~~l~~~~~~lY~dyV~KNPfy~~--~~pI~~~lF~~~l~~~~~ 141 (142)
T PF04099_consen 74 TYKLHCFETPTGLKFVLITDPNV----PSLRDELLRIYYELYVDYVVKNPFYSL--EMPIRCELFDTKLDQYVK 141 (142)
T ss_dssp S-EEEEEE-TTS-EEEEEE-TTC----CHCHHHHHHHHHHHHHHHHHS-TTS-T--TS----HHHHHHHHHHHH
T ss_pred CEEEEEEEcCcCcEEEEEecCCC----ccHHHHHHHHHHHHHHHHHhhCCCCCC--CCcEehHHHHHHHHHHHh
Confidence 99999999999999999653322 113456778888888888887765321 211234567777777653
No 7
>KOG3368 consensus Transport protein particle (TRAPP) complex subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.46 E-value=4.7 Score=36.64 Aligned_cols=96 Identities=23% Similarity=0.316 Sum_probs=65.1
Q ss_pred hhhhhhhHHHHHHHhhhccCCCc---cceEEEecceEEEEEEecCCeEEEEEEEcCCCCCchhhHHHHHHHHHHHHH-HH
Q 010307 45 TQLSVIGLSEGLITFTRIFSPEA---ACEIIEAERHSHVFYEAETDIWMVMVVEKGKDSDAIWRIDALRKVLKEVHS-LF 120 (513)
Q Consensus 45 ~ql~~IGL~egiv~Ft~~Fs~~~---~~~~I~T~k~~~v~~e~Ep~~wm~~~v~k~~~~~~~i~~~~l~~~L~~~Y~-~F 120 (513)
.|| .-|++-.|=+|++..+|++ ...++.|.|.++-++|--.++|+++.- ..+ ..-++.+|++.|+ .+
T Consensus 35 ~KL-~yGmlFSlkS~v~Kls~~d~k~~f~sy~Ts~YklhfyeTptglk~vl~T-dpk-------~~~ir~vLq~IYs~ly 105 (140)
T KOG3368|consen 35 AKL-MYGMLFSLKSFVSKLSPGDVKDGFLSYKTSKYKLHFYETPTGLKFVLNT-DPK-------AGSIRDVLQYIYSHLY 105 (140)
T ss_pred HHH-HHHHHhhHHHHHHhcCCCCcccCeeEEeeceeEEEEEEcCCCcEEEEec-CCC-------cccHHHHHHHHHHHHH
Confidence 454 6799999999999999763 488999999999999999999999952 222 2346778888888 44
Q ss_pred HHhccc--hhHh-hhcCCChhHHHHhhhHHHH
Q 010307 121 VMFYGS--IRAM-LEKDPSGGLIRSHLYPFIM 149 (513)
Q Consensus 121 ~Lf~Gs--f~~~-l~~~~~~~~L~~~L~~F~~ 149 (513)
.=+--. +-.. ....-..|.++..|++|+-
T Consensus 106 VE~Vvknpl~~~~~~~~i~~E~fr~~ld~~vr 137 (140)
T KOG3368|consen 106 VEYVVKNPLYTYDPGSPIRSELFRKILDRFVR 137 (140)
T ss_pred HHHHHcCcccccCCCCccchHHHHHHHHhhhc
Confidence 322111 1110 0000145678888888763
No 8
>KOG3369 consensus Transport protein particle (TRAPP) complex subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=49.00 E-value=70 Score=30.65 Aligned_cols=72 Identities=19% Similarity=0.381 Sum_probs=54.4
Q ss_pred CChhhhhhhhhHHHHHHHhhhccCCCc---cceEEEecceEEEEEEecCCeEEEEEEEcCCCCCchhhHHHHHHHHHHHH
Q 010307 41 LPFSTQLSVIGLSEGLITFTRIFSPEA---ACEIIEAERHSHVFYEAETDIWMVMVVEKGKDSDAIWRIDALRKVLKEVH 117 (513)
Q Consensus 41 ~~~n~ql~~IGL~egiv~Ft~~Fs~~~---~~~~I~T~k~~~v~~e~Ep~~wm~~~v~k~~~~~~~i~~~~l~~~L~~~Y 117 (513)
...|||+...+..-++..+..+++|.+ +.+.++|+..++.++|--.+.=.++.-+... ....++|+..|
T Consensus 92 ~ttNEkL~las~fhsl~aI~~qlsp~~ksSGie~LetdtF~l~~~QTlTG~KFVvis~~~~--------~~aD~lLrKiY 163 (199)
T KOG3369|consen 92 LTTNEKLILASSFHSLFAISTQLSPEPKSSGIEVLETDTFTLHIFQTLTGTKFVVIAEPGT--------QGADSLLRKIY 163 (199)
T ss_pred ccccchhhhhhhhcchhheeeccCCCCCCCceEEEEeccEEEEEEEccCCcEEEEEecCCc--------hhHHHHHHHHH
Confidence 578999999999999999999999743 5899999999999999888887776532211 23345555555
Q ss_pred HHH
Q 010307 118 SLF 120 (513)
Q Consensus 118 ~~F 120 (513)
..|
T Consensus 164 elY 166 (199)
T KOG3369|consen 164 ELY 166 (199)
T ss_pred HHH
Confidence 544
No 9
>COG3266 DamX Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.98 E-value=92 Score=31.87 Aligned_cols=38 Identities=21% Similarity=0.167 Sum_probs=32.6
Q ss_pred CCeEEEEEeeCCEEEEEEEecCCccHHhHHHHHHHHHH
Q 010307 466 NNAWAIARITGGKELYMVLEKASETLLYASDAVEKFSN 503 (513)
Q Consensus 466 ~d~WVv~k~s~~Relyvvl~~k~~tL~~v~~ev~k~~~ 503 (513)
+|+||.-+..||.++|||+--.=+|--++-++|++|-.
T Consensus 235 ~~~~vy~t~rnG~pWYvv~~G~YatrqeA~~AvstLPa 272 (292)
T COG3266 235 KGYVVYETTRNGKPWYVVVYGNYATRQEAKAAVSTLPA 272 (292)
T ss_pred CceEEeEeecCCceeEEEEecCcccHHHHHHHHhhCcH
Confidence 57999999999999999999433888899999988754
No 10
>PF09144 YpM: Yersinia pseudotuberculosis mitogen; InterPro: IPR015227 Members of this family of Yersinia pseudotuberculosis mitogens adopt a sandwich structure consisting of nine strands in two beta sheets, in a jelly-roll topology. As with other superantigens, they are able to excessively activate T cells by binding to the T cell receptor []. ; PDB: 1PM4_B 1POQ_A.
Probab=25.22 E-value=93 Score=26.45 Aligned_cols=29 Identities=31% Similarity=0.384 Sum_probs=19.2
Q ss_pred CcceEEEEecCCeEEEEEeeCCEEEEEEEecCCc
Q 010307 456 KDLEVSIRAKNNAWAIARITGGKELYMVLEKASE 489 (513)
Q Consensus 456 ~~~Ei~vKt~~d~WVv~k~s~~Relyvvl~~k~~ 489 (513)
+-+|+||+-..+. |+++-|+|.||..-|+
T Consensus 13 gkgevci~gnkeg-----k~rggelyavl~stn~ 41 (117)
T PF09144_consen 13 GKGEVCIIGNKEG-----KSRGGELYAVLHSTNV 41 (117)
T ss_dssp TT-EEEEEESTT-------S-EEEEEEEEE-SST
T ss_pred cceeEEEEeCccc-----cccCceEEEEEEeccc
Confidence 3589999975543 7889999999986664
No 11
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=21.90 E-value=4.3e+02 Score=23.06 Aligned_cols=66 Identities=21% Similarity=0.358 Sum_probs=37.7
Q ss_pred ceeEEEEcCcccccccCCCCCcccCCHHHHHHHHHHHHHHHHHhhhhccCCCCCCCcceEEEEecC-CeEEEEEeeCCEE
Q 010307 401 GYRYLLVDGDRNISRASPPGKVTTLAKESLLALSKLRDEVDLEKSRAKRDNAGCEKDLEVSIRAKN-NAWAIARITGGKE 479 (513)
Q Consensus 401 ~~ryiy~n~~~~a~r~s~~~~~~~l~~e~l~~l~~l~~ei~~~~s~~~~~~~~~~~~~Ei~vKt~~-d~WVv~k~s~~Re 479 (513)
++|-+|+|+.+..+|..+|.. .++-|+..| ..|.|.- .+|.
T Consensus 37 ~PrL~Yvdp~~~~~KGeI~~~------------------------------------~~l~v~~k~~~~F~I~t--p~Rt 78 (104)
T PF14593_consen 37 GPRLFYVDPKKMVLKGEIPWS------------------------------------KELSVEVKSFKTFFIHT--PKRT 78 (104)
T ss_dssp TTEEEEEETTTTEEEEEE--S------------------------------------TT-EEEECSSSEEEEEE--TTEE
T ss_pred CCEEEEEECCCCeECcEEecC------------------------------------CceEEEEccCCEEEEEC--CCcE
Confidence 369999999977776554421 122223333 5566543 3788
Q ss_pred EEEEEecCCccHHhHHHHHHHHHHhhc
Q 010307 480 LYMVLEKASETLLYASDAVEKFSNRYC 506 (513)
Q Consensus 480 lyvvl~~k~~tL~~v~~ev~k~~~~~f 506 (513)
.|+ +..+.....=.++++.+.++|+
T Consensus 79 Y~l--~d~~~~A~~W~~~I~~~~~~~~ 103 (104)
T PF14593_consen 79 YYL--EDPEGNAQQWVEAIEEVKKQYY 103 (104)
T ss_dssp EEE--E-TTS-HHHHHHHHHHHHHHHH
T ss_pred EEE--ECCCCCHHHHHHHHHHHHHHhc
Confidence 773 3345555566677777777765
No 12
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.83 E-value=55 Score=35.57 Aligned_cols=44 Identities=25% Similarity=0.560 Sum_probs=31.9
Q ss_pred hhhhhhhh-hHHHHHHHhhhccCCCccceEEEecceEEEEEEecCCeEEE
Q 010307 43 FSTQLSVI-GLSEGLITFTRIFSPEAACEIIEAERHSHVFYEAETDIWMV 91 (513)
Q Consensus 43 ~n~ql~~I-GL~egiv~Ft~~Fs~~~~~~~I~T~k~~~v~~e~Ep~~wm~ 91 (513)
+.=|++|| |++||+++||+- .|.+..++|||-.- +.|....|++
T Consensus 329 lgC~LQQVFGMAEGLvnyTRL--DDp~E~i~~TQGrP---lsP~DEvrvv 373 (542)
T COG1021 329 LGCQLQQVFGMAEGLVNYTRL--DDPPEIIIHTQGRP---LSPDDEVRVV 373 (542)
T ss_pred hCchHHHHhhhhhhhhccccc--CCchHheeecCCCc---CCCcceeEEe
Confidence 34556654 999999999986 44466778888764 4567777774
No 13
>PRK11901 hypothetical protein; Reviewed
Probab=20.38 E-value=1.7e+02 Score=30.74 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=32.4
Q ss_pred CCeEEEEEeeCCEEEEEEEecCCccHHhHHHHHHHHHH
Q 010307 466 NNAWAIARITGGKELYMVLEKASETLLYASDAVEKFSN 503 (513)
Q Consensus 466 ~d~WVv~k~s~~Relyvvl~~k~~tL~~v~~ev~k~~~ 503 (513)
.++||+-.+.+|+..|||+.-.=++.-++..++++|=.
T Consensus 269 ~~~~VYqT~RnGkpWYVVvyG~Y~Sr~eAk~Ai~sLPa 306 (327)
T PRK11901 269 SHYHVYETKRDGKPWYVLVSGNYASSAEAKRAIATLPA 306 (327)
T ss_pred CceEEEEEEECCceEEEEEecCcCCHHHHHHHHHhCCH
Confidence 56999999999999999999544888899999888744
Done!