Query 010309
Match_columns 513
No_of_seqs 731 out of 3588
Neff 9.5
Searched_HMMs 46136
Date Thu Mar 28 23:01:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010309.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010309hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 3.3E-54 7.1E-59 427.1 28.0 291 210-508 61-354 (361)
2 KOG0581 Mitogen-activated prot 100.0 4.8E-50 1E-54 375.6 18.7 246 231-501 85-334 (364)
3 KOG0575 Polo-like serine/threo 100.0 1.9E-49 4.2E-54 392.2 20.9 247 225-501 18-268 (592)
4 KOG0192 Tyrosine kinase specif 100.0 6E-49 1.3E-53 386.6 21.7 251 232-508 48-305 (362)
5 KOG0615 Serine/threonine prote 100.0 1.1E-49 2.5E-54 375.5 15.1 254 222-501 169-436 (475)
6 KOG0197 Tyrosine kinases [Sign 100.0 3.7E-49 8E-54 386.5 17.3 251 232-509 213-464 (468)
7 KOG0591 NIMA (never in mitosis 100.0 7.2E-50 1.6E-54 359.1 8.8 252 232-504 26-283 (375)
8 KOG0595 Serine/threonine-prote 100.0 3.5E-48 7.5E-53 366.1 18.5 201 225-436 11-220 (429)
9 KOG1026 Nerve growth factor re 100.0 1.3E-47 2.8E-52 393.4 17.2 257 230-509 491-765 (774)
10 KOG0598 Ribosomal protein S6 k 100.0 3.1E-46 6.7E-51 350.0 15.3 238 228-494 28-269 (357)
11 KOG0196 Tyrosine kinase, EPH ( 100.0 6.9E-47 1.5E-51 380.7 9.3 259 227-511 631-896 (996)
12 KOG0592 3-phosphoinositide-dep 100.0 3.8E-45 8.3E-50 355.9 17.2 244 230-501 78-337 (604)
13 KOG0198 MEKK and related serin 100.0 3.7E-45 8E-50 348.9 16.1 249 229-502 21-276 (313)
14 KOG0593 Predicted protein kina 100.0 2.8E-45 6.1E-50 332.8 13.4 261 232-501 9-283 (396)
15 KOG0600 Cdc2-related protein k 100.0 1.6E-44 3.4E-49 348.9 17.7 262 231-501 123-399 (560)
16 KOG1094 Discoidin domain recep 100.0 4.9E-44 1.1E-48 349.6 19.7 265 225-507 538-805 (807)
17 KOG0578 p21-activated serine/t 100.0 1.1E-44 2.5E-49 355.6 15.1 246 228-501 276-522 (550)
18 KOG1095 Protein tyrosine kinas 100.0 1.1E-44 2.3E-49 384.9 16.1 262 225-509 692-964 (1025)
19 KOG0582 Ste20-like serine/thre 100.0 1.2E-43 2.6E-48 337.9 20.7 259 227-501 28-292 (516)
20 KOG0583 Serine/threonine prote 100.0 9.9E-44 2.1E-48 353.0 20.9 248 224-501 16-274 (370)
21 KOG0661 MAPK related serine/th 100.0 6.1E-45 1.3E-49 349.3 11.4 261 232-502 17-291 (538)
22 cd05102 PTKc_VEGFR3 Catalytic 100.0 8.2E-44 1.8E-48 355.7 20.0 260 227-508 9-336 (338)
23 KOG0193 Serine/threonine prote 100.0 3.9E-44 8.5E-49 352.9 15.8 263 221-508 388-655 (678)
24 PHA02988 hypothetical protein; 100.0 5.5E-43 1.2E-47 340.5 21.2 246 231-507 26-280 (283)
25 KOG4721 Serine/threonine prote 100.0 8E-44 1.7E-48 346.8 13.6 238 232-506 131-368 (904)
26 KOG0659 Cdk activating kinase 100.0 6.8E-43 1.5E-47 312.2 18.1 264 230-502 7-281 (318)
27 KOG0616 cAMP-dependent protein 100.0 2.8E-43 6E-48 319.2 15.7 230 231-493 50-283 (355)
28 KOG0597 Serine-threonine prote 100.0 2.1E-43 4.6E-48 344.1 15.5 241 230-501 7-250 (808)
29 KOG0194 Protein tyrosine kinas 100.0 5E-43 1.1E-47 348.9 14.8 253 231-510 163-424 (474)
30 cd05096 PTKc_DDR1 Catalytic do 100.0 8.8E-42 1.9E-46 335.9 23.3 262 228-505 8-304 (304)
31 KOG0201 Serine/threonine prote 100.0 2.1E-43 4.6E-48 336.1 10.3 242 231-501 19-262 (467)
32 KOG0588 Serine/threonine prote 100.0 7.8E-43 1.7E-47 346.6 14.7 243 228-501 15-262 (786)
33 KOG0605 NDR and related serine 100.0 3.6E-42 7.7E-47 335.5 18.9 245 230-500 146-443 (550)
34 PLN00113 leucine-rich repeat r 100.0 9.5E-41 2.1E-45 377.7 32.7 264 224-509 690-954 (968)
35 cd05631 STKc_GRK4 Catalytic do 100.0 9.5E-42 2.1E-46 332.4 21.2 247 230-501 5-260 (285)
36 cd05571 STKc_PKB Catalytic dom 100.0 4E-42 8.7E-47 341.1 18.3 240 232-501 2-250 (323)
37 cd05104 PTKc_Kit Catalytic dom 100.0 6.6E-42 1.4E-46 346.1 20.2 257 228-506 38-374 (375)
38 KOG0585 Ca2+/calmodulin-depend 100.0 2.9E-42 6.2E-47 330.5 16.2 249 228-502 100-372 (576)
39 KOG1025 Epidermal growth facto 100.0 2.3E-42 5E-47 349.2 15.7 256 228-510 699-961 (1177)
40 KOG3653 Transforming growth fa 100.0 1.2E-41 2.6E-46 326.4 19.6 262 231-509 216-506 (534)
41 cd06649 PKc_MEK2 Catalytic dom 100.0 1.7E-41 3.6E-46 337.8 21.5 262 229-502 9-301 (331)
42 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.6E-41 3.6E-46 327.4 20.6 252 228-506 8-265 (266)
43 cd05106 PTKc_CSF-1R Catalytic 100.0 1.1E-41 2.3E-46 344.2 19.7 258 228-507 41-373 (374)
44 cd05585 STKc_YPK1_like Catalyt 100.0 8E-42 1.7E-46 337.3 17.6 239 233-501 1-246 (312)
45 PTZ00267 NIMA-related protein 100.0 2.6E-41 5.6E-46 351.9 22.2 252 227-501 69-322 (478)
46 KOG0611 Predicted serine/threo 100.0 6.4E-42 1.4E-46 321.6 15.3 241 230-502 58-303 (668)
47 PF07714 Pkinase_Tyr: Protein 100.0 5.7E-42 1.2E-46 329.2 15.5 248 231-503 5-259 (259)
48 KOG0580 Serine/threonine prote 100.0 3E-42 6.4E-47 303.8 12.2 244 228-501 25-272 (281)
49 cd05595 STKc_PKB_beta Catalyti 100.0 1.8E-41 3.8E-46 336.4 19.2 241 231-501 1-250 (323)
50 cd05612 STKc_PRKX_like Catalyt 100.0 1.3E-41 2.8E-46 332.5 17.8 239 230-501 6-253 (291)
51 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.8E-41 8.3E-46 328.7 21.1 263 230-501 10-284 (288)
52 cd05593 STKc_PKB_gamma Catalyt 100.0 1.9E-41 4E-46 336.8 19.0 240 232-501 2-250 (328)
53 KOG0694 Serine/threonine prote 100.0 1.4E-41 3.1E-46 340.2 18.0 236 230-496 373-613 (694)
54 cd05072 PTKc_Lyn Catalytic dom 100.0 4.8E-41 1E-45 323.1 20.8 251 229-506 10-261 (261)
55 KOG2345 Serine/threonine prote 100.0 1E-41 2.2E-46 301.7 14.3 267 222-507 18-301 (302)
56 cd05049 PTKc_Trk Catalytic dom 100.0 6.2E-41 1.3E-45 325.7 21.1 252 231-505 11-280 (280)
57 KOG0660 Mitogen-activated prot 100.0 5.9E-42 1.3E-46 320.0 13.3 264 230-501 27-309 (359)
58 KOG0658 Glycogen synthase kina 100.0 2.5E-42 5.4E-47 323.0 10.6 260 229-501 28-305 (364)
59 cd05084 PTKc_Fes Catalytic dom 100.0 9.1E-41 2E-45 319.4 21.7 248 232-505 2-252 (252)
60 KOG1989 ARK protein kinase fam 100.0 3.3E-41 7.2E-46 347.9 19.9 257 228-510 40-315 (738)
61 cd07848 STKc_CDKL5 Catalytic d 100.0 4.6E-41 1E-45 327.9 19.8 265 229-501 5-283 (287)
62 cd05093 PTKc_TrkB Catalytic do 100.0 7E-41 1.5E-45 326.9 20.8 258 229-509 9-282 (288)
63 cd05048 PTKc_Ror Catalytic Dom 100.0 1E-40 2.2E-45 324.7 21.9 254 230-506 10-283 (283)
64 cd08228 STKc_Nek6 Catalytic do 100.0 1.5E-40 3.3E-45 320.6 22.6 257 229-507 6-266 (267)
65 PTZ00263 protein kinase A cata 100.0 2.5E-41 5.3E-46 336.2 17.4 240 229-501 22-270 (329)
66 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.5E-40 3.3E-45 318.7 22.2 247 230-504 9-256 (256)
67 cd05068 PTKc_Frk_like Catalyti 100.0 1.3E-40 2.8E-45 320.2 21.6 251 229-506 10-261 (261)
68 cd05105 PTKc_PDGFR_alpha Catal 100.0 8.1E-41 1.7E-45 339.3 21.2 260 227-508 39-399 (400)
69 cd05094 PTKc_TrkC Catalytic do 100.0 1.4E-40 3E-45 325.3 22.1 258 230-510 10-286 (291)
70 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.3E-41 9.4E-46 335.3 18.6 248 230-502 6-257 (333)
71 cd06650 PKc_MEK1 Catalytic dom 100.0 8.7E-41 1.9E-45 332.8 20.7 264 228-501 8-298 (333)
72 cd05608 STKc_GRK1 Catalytic do 100.0 9.1E-41 2E-45 324.7 20.1 247 233-501 1-256 (280)
73 cd05052 PTKc_Abl Catalytic dom 100.0 1.5E-40 3.2E-45 320.1 21.3 250 230-506 11-262 (263)
74 KOG0589 Serine/threonine prote 100.0 1.1E-41 2.4E-46 332.9 13.5 247 229-502 8-258 (426)
75 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.2E-40 2.6E-45 320.3 20.1 250 230-506 11-261 (261)
76 cd05108 PTKc_EGFR Catalytic do 100.0 8.8E-41 1.9E-45 330.6 19.7 256 228-510 10-272 (316)
77 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.7E-40 1E-44 317.1 24.0 256 230-507 7-266 (267)
78 cd05607 STKc_GRK7 Catalytic do 100.0 2E-40 4.4E-45 321.7 21.5 247 233-503 1-251 (277)
79 cd05594 STKc_PKB_alpha Catalyt 100.0 3.2E-41 6.9E-46 335.0 16.1 241 231-501 1-251 (325)
80 cd05584 STKc_p70S6K Catalytic 100.0 8E-41 1.7E-45 331.7 18.8 241 231-501 2-255 (323)
81 KOG0663 Protein kinase PITSLRE 100.0 7.7E-41 1.7E-45 307.8 16.6 265 227-501 79-360 (419)
82 cd05054 PTKc_VEGFR Catalytic d 100.0 1.1E-40 2.4E-45 332.3 19.2 260 228-509 10-336 (337)
83 PTZ00283 serine/threonine prot 100.0 1.7E-40 3.6E-45 346.1 21.4 251 228-501 35-296 (496)
84 KOG0610 Putative serine/threon 100.0 2.3E-40 5.1E-45 313.1 20.2 247 231-501 83-391 (459)
85 PTZ00426 cAMP-dependent protei 100.0 7.5E-41 1.6E-45 333.6 17.8 239 230-501 35-283 (340)
86 KOG0594 Protein kinase PCTAIRE 100.0 4.7E-40 1E-44 308.4 21.7 267 233-506 19-308 (323)
87 cd05062 PTKc_IGF-1R Catalytic 100.0 2.7E-40 5.7E-45 320.9 20.9 254 229-505 10-277 (277)
88 cd05590 STKc_nPKC_eta Catalyti 100.0 1E-40 2.3E-45 330.4 18.4 235 232-496 2-241 (320)
89 cd05033 PTKc_EphR Catalytic do 100.0 3.8E-40 8.2E-45 317.8 21.7 252 229-506 8-265 (266)
90 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4E-40 8.7E-45 315.8 21.7 246 231-504 10-256 (256)
91 cd05591 STKc_nPKC_epsilon Cata 100.0 8E-41 1.7E-45 331.5 17.3 240 232-501 2-253 (321)
92 cd05588 STKc_aPKC Catalytic do 100.0 2.2E-40 4.8E-45 329.4 20.3 248 231-501 1-261 (329)
93 cd07862 STKc_CDK6 Catalytic do 100.0 4E-40 8.6E-45 321.8 21.6 262 230-501 6-286 (290)
94 cd05045 PTKc_RET Catalytic dom 100.0 3.9E-40 8.4E-45 321.9 21.5 257 230-509 5-289 (290)
95 cd05090 PTKc_Ror1 Catalytic do 100.0 5E-40 1.1E-44 320.0 22.0 253 230-505 10-282 (283)
96 cd08229 STKc_Nek7 Catalytic do 100.0 4.3E-40 9.3E-45 317.5 21.3 256 230-507 7-266 (267)
97 KOG4278 Protein tyrosine kinas 100.0 2E-41 4.3E-46 332.8 12.0 252 231-509 273-526 (1157)
98 cd05592 STKc_nPKC_theta_delta 100.0 2.2E-40 4.8E-45 327.5 19.5 239 232-500 2-246 (316)
99 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.8E-40 8.1E-45 324.1 21.0 261 230-501 10-287 (303)
100 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.9E-40 8.5E-45 320.7 20.8 270 225-507 4-282 (283)
101 PLN00034 mitogen-activated pro 100.0 3.6E-40 7.9E-45 331.2 21.2 242 231-502 80-328 (353)
102 cd05619 STKc_nPKC_theta Cataly 100.0 3.1E-40 6.6E-45 326.4 20.3 239 232-500 2-246 (316)
103 cd05059 PTKc_Tec_like Catalyti 100.0 4.9E-40 1.1E-44 315.2 21.0 247 230-504 9-256 (256)
104 cd05075 PTKc_Axl Catalytic dom 100.0 6.9E-40 1.5E-44 316.9 22.2 254 230-506 4-271 (272)
105 cd05570 STKc_PKC Catalytic dom 100.0 2.5E-40 5.4E-45 327.5 19.4 240 232-501 2-251 (318)
106 cd05085 PTKc_Fer Catalytic dom 100.0 7.3E-40 1.6E-44 312.7 21.9 246 232-504 2-249 (250)
107 cd05618 STKc_aPKC_iota Catalyt 100.0 3.3E-40 7.1E-45 328.1 20.3 243 231-496 1-250 (329)
108 cd05620 STKc_nPKC_delta Cataly 100.0 2.4E-40 5.1E-45 327.3 18.9 239 232-500 2-246 (316)
109 cd05589 STKc_PKN Catalytic dom 100.0 3.5E-40 7.6E-45 327.4 19.7 241 230-501 4-256 (324)
110 cd05111 PTK_HER3 Pseudokinase 100.0 6.1E-40 1.3E-44 318.7 21.0 254 230-510 12-272 (279)
111 cd05605 STKc_GRK4_like Catalyt 100.0 6.7E-40 1.5E-44 319.4 21.3 247 230-501 5-260 (285)
112 cd05035 PTKc_Axl_like Catalyti 100.0 9E-40 2E-44 316.2 22.0 254 230-506 4-272 (273)
113 cd05582 STKc_RSK_N N-terminal 100.0 6.2E-41 1.3E-45 331.9 14.1 238 231-498 2-245 (318)
114 KOG4257 Focal adhesion tyrosin 100.0 1.1E-40 2.5E-45 327.9 15.7 253 228-508 392-651 (974)
115 cd05067 PTKc_Lck_Blk Catalytic 100.0 7.9E-40 1.7E-44 314.5 21.2 251 228-506 9-260 (260)
116 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.4E-40 7.3E-45 329.6 19.1 263 230-501 5-289 (338)
117 cd05617 STKc_aPKC_zeta Catalyt 100.0 6.5E-40 1.4E-44 325.7 21.0 242 232-496 2-248 (327)
118 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.2E-39 2.6E-44 313.2 22.1 248 230-505 11-259 (260)
119 cd05055 PTKc_PDGFR Catalytic d 100.0 7.4E-40 1.6E-44 321.7 21.1 255 228-506 38-301 (302)
120 PHA03212 serine/threonine kina 100.0 8.9E-40 1.9E-44 331.4 22.2 265 227-506 94-382 (391)
121 KOG0032 Ca2+/calmodulin-depend 100.0 9.2E-40 2E-44 324.3 21.8 249 225-501 35-292 (382)
122 cd05053 PTKc_FGFR Catalytic do 100.0 5.4E-40 1.2E-44 321.4 19.6 256 229-507 16-292 (293)
123 cd00192 PTKc Catalytic domain 100.0 1.2E-39 2.6E-44 312.8 21.7 250 232-504 2-262 (262)
124 cd05116 PTKc_Syk Catalytic dom 100.0 1.2E-39 2.6E-44 312.7 21.5 247 232-506 2-255 (257)
125 cd05109 PTKc_HER2 Catalytic do 100.0 9.6E-40 2.1E-44 317.3 21.2 257 228-511 10-273 (279)
126 cd05115 PTKc_Zap-70 Catalytic 100.0 1.4E-39 3E-44 312.3 21.9 247 233-506 3-255 (257)
127 cd05091 PTKc_Ror2 Catalytic do 100.0 9.6E-40 2.1E-44 318.0 21.1 252 231-505 11-282 (283)
128 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.1E-39 2.4E-44 317.6 21.5 267 230-506 9-283 (284)
129 cd05092 PTKc_TrkA Catalytic do 100.0 9.6E-40 2.1E-44 317.5 20.6 253 230-505 10-280 (280)
130 cd05575 STKc_SGK Catalytic dom 100.0 2.1E-40 4.6E-45 328.8 16.2 236 232-497 2-242 (323)
131 cd05071 PTKc_Src Catalytic dom 100.0 1.6E-39 3.4E-44 312.8 21.8 251 228-506 9-260 (262)
132 KOG0033 Ca2+/calmodulin-depend 100.0 2.9E-42 6.2E-47 304.3 2.4 246 229-501 15-266 (355)
133 cd05626 STKc_LATS2 Catalytic d 100.0 5.4E-40 1.2E-44 333.2 19.3 249 229-501 5-304 (381)
134 cd05041 PTKc_Fes_like Catalyti 100.0 1.9E-39 4.2E-44 310.0 22.0 248 232-505 2-251 (251)
135 cd05039 PTKc_Csk_like Catalyti 100.0 2.2E-39 4.8E-44 310.6 22.4 246 229-506 10-256 (256)
136 cd05043 PTK_Ryk Pseudokinase d 100.0 1.1E-39 2.4E-44 317.1 20.5 257 229-508 10-278 (280)
137 cd05032 PTKc_InsR_like Catalyt 100.0 9.1E-40 2E-44 317.0 19.9 253 230-505 11-277 (277)
138 cd05034 PTKc_Src_like Catalyti 100.0 2.3E-39 4.9E-44 311.4 22.4 251 228-505 9-260 (261)
139 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.4E-39 5.2E-44 311.5 22.6 239 232-504 2-262 (262)
140 cd05069 PTKc_Yes Catalytic dom 100.0 2.3E-39 5E-44 311.3 22.4 249 229-505 10-259 (260)
141 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.5E-39 3.2E-44 315.7 21.2 254 229-505 10-277 (277)
142 cd05614 STKc_MSK2_N N-terminal 100.0 8.3E-40 1.8E-44 325.9 19.9 247 230-501 5-266 (332)
143 cd05587 STKc_cPKC Catalytic do 100.0 8.3E-40 1.8E-44 324.7 19.8 237 230-496 5-246 (324)
144 PTZ00036 glycogen synthase kin 100.0 7E-40 1.5E-44 337.4 19.6 261 227-501 68-350 (440)
145 KOG4717 Serine/threonine prote 100.0 5.1E-40 1.1E-44 317.0 17.3 257 226-512 19-282 (864)
146 cd05628 STKc_NDR1 Catalytic do 100.0 7.8E-40 1.7E-44 330.0 19.4 248 230-502 6-293 (363)
147 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.9E-39 4.2E-44 314.3 21.4 239 232-504 2-274 (274)
148 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.5E-39 3.3E-44 319.9 20.9 258 229-509 19-299 (304)
149 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.2E-39 2.7E-44 330.5 20.7 257 229-507 41-400 (401)
150 cd05040 PTKc_Ack_like Catalyti 100.0 1.7E-39 3.6E-44 311.6 20.5 248 232-504 2-256 (257)
151 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.8E-39 4E-44 319.8 21.3 259 228-509 21-302 (307)
152 cd05596 STKc_ROCK Catalytic do 100.0 5.1E-40 1.1E-44 331.7 17.7 246 230-501 48-303 (370)
153 cd05047 PTKc_Tie Catalytic dom 100.0 2.8E-39 6.1E-44 312.5 22.1 250 232-507 2-269 (270)
154 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.3E-40 5E-45 332.4 14.9 248 230-502 6-285 (350)
155 cd06646 STKc_MAP4K5 Catalytic 100.0 2.3E-39 5E-44 312.5 21.2 251 228-503 12-266 (267)
156 cd05602 STKc_SGK1 Catalytic do 100.0 5.3E-40 1.2E-44 326.2 17.2 240 232-501 2-246 (325)
157 cd08529 STKc_FA2-like Catalyti 100.0 3E-39 6.5E-44 309.4 21.6 246 230-502 5-253 (256)
158 cd05616 STKc_cPKC_beta Catalyt 100.0 1.1E-39 2.4E-44 323.6 19.1 237 230-496 5-246 (323)
159 cd05097 PTKc_DDR_like Catalyti 100.0 2.2E-39 4.7E-44 317.5 21.0 262 228-505 8-295 (295)
160 cd05604 STKc_SGK3 Catalytic do 100.0 3.2E-40 7E-45 327.8 15.1 240 232-501 2-246 (325)
161 cd05060 PTKc_Syk_like Catalyti 100.0 3.4E-39 7.4E-44 309.5 21.7 248 232-507 2-256 (257)
162 cd05051 PTKc_DDR Catalytic dom 100.0 5.9E-39 1.3E-43 314.5 23.7 260 230-505 10-296 (296)
163 cd05599 STKc_NDR_like Catalyti 100.0 1.1E-39 2.4E-44 329.2 19.1 247 230-501 6-295 (364)
164 cd05603 STKc_SGK2 Catalytic do 100.0 7.7E-40 1.7E-44 324.6 17.6 236 232-497 2-242 (321)
165 cd05082 PTKc_Csk Catalytic dom 100.0 3.9E-39 8.5E-44 308.9 21.8 244 230-506 11-256 (256)
166 cd05089 PTKc_Tie1 Catalytic do 100.0 2.8E-39 6E-44 317.0 21.2 253 230-508 7-277 (297)
167 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.8E-39 8.3E-44 311.4 21.9 254 232-504 2-268 (269)
168 cd05061 PTKc_InsR Catalytic do 100.0 4.9E-39 1.1E-43 313.8 22.5 257 230-509 11-281 (288)
169 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.5E-39 9.7E-44 310.6 21.7 251 230-506 10-267 (268)
170 cd05073 PTKc_Hck Catalytic dom 100.0 4.1E-39 8.9E-44 309.5 21.4 252 227-506 8-260 (260)
171 cd05601 STKc_CRIK Catalytic do 100.0 8.5E-40 1.8E-44 325.6 17.1 247 230-501 6-262 (330)
172 cd05095 PTKc_DDR2 Catalytic do 100.0 5.9E-39 1.3E-43 314.5 22.8 262 228-505 8-296 (296)
173 cd06654 STKc_PAK1 Catalytic do 100.0 5.3E-39 1.1E-43 314.8 22.4 244 230-501 25-269 (296)
174 cd07868 STKc_CDK8 Catalytic do 100.0 3.8E-39 8.2E-44 319.1 21.5 199 230-434 6-220 (317)
175 cd06615 PKc_MEK Catalytic doma 100.0 3.7E-39 8.1E-44 317.7 21.1 262 230-502 6-287 (308)
176 cd05065 PTKc_EphR_B Catalytic 100.0 4.1E-39 9E-44 311.1 20.9 252 229-506 8-268 (269)
177 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.3E-39 7.1E-44 318.4 20.5 264 229-501 10-285 (309)
178 cd05044 PTKc_c-ros Catalytic d 100.0 3.2E-39 7E-44 311.8 20.0 251 232-505 2-269 (269)
179 cd05050 PTKc_Musk Catalytic do 100.0 4.6E-39 1E-43 314.0 21.3 252 231-505 11-288 (288)
180 cd05088 PTKc_Tie2 Catalytic do 100.0 2.6E-39 5.6E-44 318.1 19.5 255 229-509 11-283 (303)
181 cd05625 STKc_LATS1 Catalytic d 100.0 1.2E-39 2.7E-44 330.9 17.5 248 229-501 5-304 (382)
182 cd06619 PKc_MKK5 Catalytic dom 100.0 1.2E-38 2.6E-43 309.7 23.7 245 230-502 6-253 (279)
183 cd05630 STKc_GRK6 Catalytic do 100.0 5.1E-39 1.1E-43 313.1 21.0 248 229-501 4-260 (285)
184 KOG2052 Activin A type IB rece 100.0 1E-38 2.2E-43 304.2 22.1 263 228-508 214-505 (513)
185 cd07853 STKc_NLK Catalytic dom 100.0 6.7E-39 1.4E-43 324.4 22.4 258 230-501 5-287 (372)
186 cd05629 STKc_NDR_like_fungal C 100.0 1.3E-39 2.9E-44 330.1 17.2 248 230-502 6-305 (377)
187 cd06625 STKc_MEKK3_like Cataly 100.0 7.6E-39 1.6E-43 308.0 21.6 248 229-502 6-260 (263)
188 cd05621 STKc_ROCK2 Catalytic d 100.0 2E-39 4.4E-44 327.0 18.3 248 229-502 47-304 (370)
189 cd06643 STKc_SLK Catalytic dom 100.0 5.9E-39 1.3E-43 312.3 20.9 246 230-501 10-261 (282)
190 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 5.2E-39 1.1E-43 313.0 20.5 263 225-506 4-283 (284)
191 cd05099 PTKc_FGFR4 Catalytic d 100.0 7.2E-39 1.6E-43 316.6 21.7 257 229-508 16-295 (314)
192 cd07876 STKc_JNK2 Catalytic do 100.0 7.9E-39 1.7E-43 322.3 22.3 265 222-501 19-314 (359)
193 cd07863 STKc_CDK4 Catalytic do 100.0 7.9E-39 1.7E-43 312.3 21.6 262 230-501 5-284 (288)
194 cd05042 PTKc_Aatyk Catalytic d 100.0 6.5E-39 1.4E-43 309.7 20.7 254 232-504 2-268 (269)
195 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2E-39 4.3E-44 311.4 17.0 239 232-504 2-258 (258)
196 cd06656 STKc_PAK3 Catalytic do 100.0 1.2E-38 2.7E-43 312.3 23.0 244 230-501 24-268 (297)
197 cd05058 PTKc_Met_Ron Catalytic 100.0 8.5E-39 1.8E-43 307.6 21.4 250 232-507 2-260 (262)
198 KOG0599 Phosphorylase kinase g 100.0 1.2E-39 2.6E-44 292.0 13.9 245 230-501 22-282 (411)
199 cd05112 PTKc_Itk Catalytic dom 100.0 1.1E-38 2.3E-43 305.7 21.6 247 230-504 9-256 (256)
200 cd08219 STKc_Nek3 Catalytic do 100.0 6.7E-39 1.5E-43 307.1 20.1 246 230-502 5-252 (255)
201 cd05598 STKc_LATS Catalytic do 100.0 1.2E-39 2.7E-44 330.2 15.7 248 230-502 6-301 (376)
202 cd05615 STKc_cPKC_alpha Cataly 100.0 4.3E-39 9.3E-44 319.3 19.2 237 230-496 5-246 (323)
203 PHA03207 serine/threonine kina 100.0 7.9E-39 1.7E-43 325.7 21.5 261 227-501 94-374 (392)
204 KOG0574 STE20-like serine/thre 100.0 5.6E-41 1.2E-45 304.2 5.0 241 233-501 41-282 (502)
205 cd05066 PTKc_EphR_A Catalytic 100.0 1.2E-38 2.6E-43 307.6 21.5 251 230-506 9-266 (267)
206 cd05103 PTKc_VEGFR2 Catalytic 100.0 5E-39 1.1E-43 321.5 19.5 260 227-508 9-341 (343)
207 PRK13184 pknD serine/threonine 100.0 7.3E-39 1.6E-43 343.0 21.9 258 229-507 6-291 (932)
208 cd05632 STKc_GRK5 Catalytic do 100.0 1E-38 2.2E-43 311.1 21.0 247 230-501 5-260 (285)
209 cd06655 STKc_PAK2 Catalytic do 100.0 1.5E-38 3.4E-43 311.5 22.3 244 230-501 24-268 (296)
210 KOG4279 Serine/threonine prote 100.0 9.4E-40 2E-44 324.7 13.7 246 230-501 580-831 (1226)
211 cd05086 PTKc_Aatyk2 Catalytic 100.0 9.6E-39 2.1E-43 308.4 20.4 254 232-504 2-267 (268)
212 cd05056 PTKc_FAK Catalytic dom 100.0 8.4E-39 1.8E-43 309.1 19.7 252 229-508 10-267 (270)
213 cd06637 STKc_TNIK Catalytic do 100.0 9.5E-39 2.1E-43 309.0 20.1 244 231-501 12-268 (272)
214 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.5E-38 3.2E-43 305.2 21.2 237 232-504 2-259 (259)
215 KOG0607 MAP kinase-interacting 100.0 1.1E-39 2.3E-44 298.2 12.4 263 216-501 75-360 (463)
216 cd05057 PTKc_EGFR_like Catalyt 100.0 1E-38 2.3E-43 310.0 20.0 254 230-510 12-272 (279)
217 cd06645 STKc_MAP4K3 Catalytic 100.0 1.3E-38 2.8E-43 307.3 20.5 246 231-501 15-264 (267)
218 cd08227 PK_STRAD_alpha Pseudok 100.0 1.8E-38 3.9E-43 315.6 22.2 264 231-501 4-306 (327)
219 cd06612 STKc_MST1_2 Catalytic 100.0 2.7E-38 5.8E-43 302.9 22.5 244 230-501 8-252 (256)
220 cd06644 STKc_STK10_LOK Catalyt 100.0 3.1E-38 6.8E-43 308.8 23.4 246 230-501 17-268 (292)
221 cd06624 STKc_ASK Catalytic dom 100.0 1.9E-38 4.1E-43 306.3 21.5 245 231-501 14-264 (268)
222 cd05046 PTK_CCK4 Pseudokinase 100.0 2E-38 4.4E-43 307.3 21.7 253 230-505 10-275 (275)
223 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.4E-38 3E-43 317.3 21.0 257 228-507 15-294 (334)
224 cd05586 STKc_Sck1_like Catalyt 100.0 1.6E-39 3.5E-44 323.5 14.1 240 233-501 1-252 (330)
225 PTZ00266 NIMA-related protein 100.0 1.7E-38 3.6E-43 341.5 22.7 256 229-507 17-302 (1021)
226 cd06638 STKc_myosinIIIA Cataly 100.0 1.3E-38 2.9E-43 310.4 19.9 262 216-502 10-283 (286)
227 PF00069 Pkinase: Protein kina 100.0 8.7E-39 1.9E-43 306.9 18.3 250 229-501 3-256 (260)
228 cd06613 STKc_MAP4K3_like Catal 100.0 3.8E-38 8.2E-43 302.9 22.8 249 229-501 7-259 (262)
229 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.8E-38 3.8E-43 312.0 20.9 264 229-501 10-285 (301)
230 cd05622 STKc_ROCK1 Catalytic d 100.0 6E-39 1.3E-43 323.8 18.0 252 224-502 43-304 (371)
231 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.6E-38 5.7E-43 307.7 21.8 267 230-507 9-284 (284)
232 cd06640 STKc_MST4 Catalytic do 100.0 5.2E-38 1.1E-42 304.8 23.7 243 230-502 9-253 (277)
233 cd06609 STKc_MST3_like Catalyt 100.0 2.6E-38 5.6E-43 306.4 21.4 242 231-501 7-250 (274)
234 KOG0667 Dual-specificity tyros 100.0 6.8E-39 1.5E-43 320.9 17.7 199 227-437 188-395 (586)
235 PHA03211 serine/threonine kina 100.0 4E-38 8.7E-43 323.3 23.8 260 230-502 174-455 (461)
236 cd07867 STKc_CDC2L6 Catalytic 100.0 5.5E-38 1.2E-42 310.7 24.0 199 230-434 6-220 (317)
237 cd08528 STKc_Nek10 Catalytic d 100.0 2.5E-38 5.5E-43 305.5 21.1 250 230-504 5-268 (269)
238 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.5E-38 3.3E-43 308.6 19.2 241 231-501 10-252 (277)
239 cd07861 STKc_CDK1_euk Catalyti 100.0 2.6E-38 5.7E-43 308.0 21.0 261 231-501 6-281 (285)
240 cd06631 STKc_YSK4 Catalytic do 100.0 3.4E-38 7.4E-43 303.9 21.4 247 230-501 5-261 (265)
241 cd05083 PTKc_Chk Catalytic dom 100.0 3.2E-38 7E-43 302.2 20.9 243 229-505 10-253 (254)
242 cd05627 STKc_NDR2 Catalytic do 100.0 5.7E-39 1.2E-43 323.4 16.2 247 230-501 6-292 (360)
243 cd05110 PTKc_HER4 Catalytic do 100.0 1.3E-38 2.8E-43 313.2 18.3 255 229-510 11-272 (303)
244 PHA03209 serine/threonine kina 100.0 9.2E-38 2E-42 314.0 24.7 188 227-430 68-256 (357)
245 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.7E-38 1E-42 303.3 21.7 245 230-501 5-263 (267)
246 cd05597 STKc_DMPK_like Catalyt 100.0 1.6E-38 3.4E-43 316.4 18.8 250 230-502 6-266 (331)
247 cd07875 STKc_JNK1 Catalytic do 100.0 3.1E-38 6.8E-43 318.6 21.0 265 222-501 22-317 (364)
248 cd07874 STKc_JNK3 Catalytic do 100.0 3E-38 6.6E-43 317.6 20.8 267 222-502 15-311 (355)
249 cd06611 STKc_SLK_like Catalyti 100.0 4.6E-38 9.9E-43 305.7 21.1 246 231-502 11-262 (280)
250 cd06658 STKc_PAK5 Catalytic do 100.0 1.8E-38 4E-43 310.3 18.4 243 232-502 29-272 (292)
251 KOG0577 Serine/threonine prote 100.0 1.5E-39 3.3E-44 318.3 10.5 238 233-502 34-278 (948)
252 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.6E-38 7.7E-43 307.1 20.1 250 231-503 11-267 (284)
253 cd06659 STKc_PAK6 Catalytic do 100.0 2.6E-38 5.6E-43 310.0 19.0 242 232-501 28-270 (297)
254 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.8E-38 1.5E-42 303.2 21.4 254 230-506 4-272 (273)
255 cd06639 STKc_myosinIIIB Cataly 100.0 4.7E-38 1E-42 307.3 20.2 262 215-501 13-286 (291)
256 KOG0584 Serine/threonine prote 100.0 1.8E-39 3.9E-44 322.2 10.0 249 224-501 39-295 (632)
257 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.6E-38 5.6E-43 316.6 18.4 264 222-501 13-297 (343)
258 smart00219 TyrKc Tyrosine kina 100.0 8.6E-38 1.9E-42 299.5 21.2 248 230-503 4-258 (258)
259 cd08221 STKc_Nek9 Catalytic do 100.0 9.4E-38 2E-42 299.2 21.5 247 230-503 5-254 (256)
260 cd08223 STKc_Nek4 Catalytic do 100.0 1.2E-37 2.6E-42 298.6 22.1 246 229-501 4-253 (257)
261 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7.6E-38 1.7E-42 304.4 20.7 256 218-501 10-278 (282)
262 cd06605 PKc_MAPKK Catalytic do 100.0 4.9E-38 1.1E-42 302.7 19.1 247 231-501 7-256 (265)
263 cd06629 STKc_MAPKKK_Bck1_like 100.0 9.2E-38 2E-42 302.2 20.9 250 230-501 6-268 (272)
264 KOG0199 ACK and related non-re 100.0 9.3E-39 2E-43 318.2 14.2 248 230-503 115-369 (1039)
265 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.4E-37 3.1E-42 303.0 22.3 263 230-501 6-282 (286)
266 cd06632 STKc_MEKK1_plant Catal 100.0 1E-37 2.2E-42 299.1 20.9 243 230-501 5-254 (258)
267 cd05623 STKc_MRCK_alpha Cataly 100.0 3.8E-38 8.2E-43 313.8 18.3 250 230-502 6-266 (332)
268 KOG0579 Ste20-like serine/thre 100.0 2.6E-39 5.6E-44 318.6 9.7 243 233-501 40-288 (1187)
269 cd06651 STKc_MEKK3 Catalytic d 100.0 1.8E-37 3.8E-42 299.2 22.2 245 230-501 7-260 (266)
270 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.3E-37 2.7E-42 303.5 21.3 248 230-501 6-261 (286)
271 cd06617 PKc_MKK3_6 Catalytic d 100.0 9.9E-38 2.2E-42 303.7 20.4 247 231-501 7-260 (283)
272 KOG0596 Dual specificity; seri 100.0 1.3E-38 2.7E-43 310.5 13.8 259 218-501 354-626 (677)
273 cd08218 STKc_Nek1 Catalytic do 100.0 1.2E-37 2.7E-42 298.4 20.2 245 230-501 5-252 (256)
274 PTZ00284 protein kinase; Provi 100.0 1.2E-37 2.7E-42 324.1 21.8 263 224-501 129-437 (467)
275 cd05624 STKc_MRCK_beta Catalyt 100.0 4.1E-38 8.8E-43 313.4 17.4 249 230-501 6-265 (331)
276 cd08217 STKc_Nek2 Catalytic do 100.0 1.7E-37 3.6E-42 298.6 21.1 246 231-501 6-261 (265)
277 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 4.3E-37 9.4E-42 299.9 24.1 255 231-501 7-265 (287)
278 cd06917 STKc_NAK1_like Catalyt 100.0 2.6E-37 5.6E-42 299.8 22.4 243 230-501 6-254 (277)
279 cd07839 STKc_CDK5 Catalytic do 100.0 8.6E-38 1.9E-42 304.3 19.0 261 230-501 5-280 (284)
280 cd05574 STKc_phototropin_like 100.0 1.5E-37 3.3E-42 307.5 21.0 248 230-501 6-288 (316)
281 cd06608 STKc_myosinIII_like Ca 100.0 1.5E-37 3.3E-42 300.7 20.7 250 228-501 9-271 (275)
282 cd06623 PKc_MAPKK_plant_like C 100.0 3.6E-37 7.9E-42 296.3 22.9 247 230-501 6-255 (264)
283 cd06648 STKc_PAK_II Catalytic 100.0 2.2E-37 4.8E-42 301.7 21.6 244 230-501 24-268 (285)
284 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3.3E-37 7.1E-42 297.1 22.4 253 230-501 6-263 (267)
285 cd06647 STKc_PAK_I Catalytic d 100.0 3.4E-37 7.3E-42 301.6 22.8 245 230-502 24-269 (293)
286 cd06630 STKc_MEKK1 Catalytic d 100.0 2.9E-37 6.2E-42 297.9 22.0 249 230-501 5-263 (268)
287 cd08220 STKc_Nek8 Catalytic do 100.0 1.7E-37 3.8E-42 297.2 20.2 244 230-501 5-252 (256)
288 cd07844 STKc_PCTAIRE_like Cata 100.0 2.4E-37 5.1E-42 302.4 21.2 262 229-501 9-287 (291)
289 cd06652 STKc_MEKK2 Catalytic d 100.0 3.3E-37 7.2E-42 297.1 21.9 245 230-501 7-260 (265)
290 cd07841 STKc_CDK7 Catalytic do 100.0 2.5E-37 5.5E-42 303.2 21.3 264 230-502 5-282 (298)
291 cd07832 STKc_CCRK Catalytic do 100.0 2E-37 4.3E-42 301.9 20.4 261 230-501 5-281 (286)
292 cd06641 STKc_MST3 Catalytic do 100.0 4.3E-37 9.3E-42 298.4 22.4 242 230-501 9-252 (277)
293 cd05609 STKc_MAST Catalytic do 100.0 2.1E-37 4.6E-42 304.9 20.6 251 230-505 6-273 (305)
294 cd05572 STKc_cGK_PKG Catalytic 100.0 2.8E-37 6.1E-42 297.1 20.4 242 233-501 1-251 (262)
295 KOG0983 Mitogen-activated prot 100.0 2E-38 4.4E-43 284.2 11.4 244 232-501 99-348 (391)
296 cd06607 STKc_TAO Catalytic dom 100.0 6.3E-37 1.4E-41 301.8 23.2 241 230-502 20-267 (307)
297 cd05633 STKc_GRK3 Catalytic do 100.0 4.3E-37 9.2E-42 298.7 21.5 241 232-501 1-254 (279)
298 cd05577 STKc_GRK Catalytic dom 100.0 4.3E-37 9.2E-42 298.4 21.2 244 233-501 1-253 (277)
299 KOG0986 G protein-coupled rece 100.0 1.9E-38 4E-43 302.5 10.7 255 218-497 178-436 (591)
300 cd07846 STKc_CDKL2_3 Catalytic 100.0 2E-37 4.3E-42 302.1 18.1 263 230-501 6-282 (286)
301 cd06614 STKc_PAK Catalytic dom 100.0 5.9E-37 1.3E-41 298.8 21.3 245 230-501 24-269 (286)
302 KOG0586 Serine/threonine prote 100.0 1.1E-37 2.5E-42 309.0 15.9 246 225-501 56-305 (596)
303 cd06626 STKc_MEKK4 Catalytic d 100.0 7.1E-37 1.5E-41 294.4 21.1 248 230-501 5-260 (264)
304 cd06635 STKc_TAO1 Catalytic do 100.0 1.2E-36 2.6E-41 301.1 23.3 246 230-507 30-282 (317)
305 cd07843 STKc_CDC2L1 Catalytic 100.0 7E-37 1.5E-41 299.4 21.3 262 231-501 11-289 (293)
306 cd05578 STKc_Yank1 Catalytic d 100.0 2E-37 4.4E-42 297.3 17.1 243 230-500 5-253 (258)
307 KOG0604 MAP kinase-activated p 100.0 3.9E-38 8.5E-43 285.8 11.3 255 221-501 58-321 (400)
308 cd05580 STKc_PKA Catalytic dom 100.0 6.3E-37 1.4E-41 299.3 20.5 239 230-501 6-253 (290)
309 cd07833 STKc_CDKL Catalytic do 100.0 6.6E-37 1.4E-41 298.6 20.5 265 229-501 5-284 (288)
310 cd06657 STKc_PAK4 Catalytic do 100.0 7.6E-37 1.6E-41 298.9 20.6 243 231-501 26-269 (292)
311 cd07860 STKc_CDK2_3 Catalytic 100.0 4.7E-37 1E-41 299.1 19.0 257 230-501 5-280 (284)
312 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.4E-36 3.1E-41 296.8 22.4 262 230-501 10-287 (291)
313 cd07850 STKc_JNK Catalytic dom 100.0 9.8E-37 2.1E-41 306.3 21.8 266 222-501 14-310 (353)
314 cd07842 STKc_CDK8_like Catalyt 100.0 2.3E-36 5E-41 298.9 23.7 267 231-501 6-312 (316)
315 cd05122 PKc_STE Catalytic doma 100.0 1.7E-36 3.6E-41 289.1 21.8 245 230-501 5-250 (253)
316 cd06616 PKc_MKK4 Catalytic dom 100.0 6.1E-37 1.3E-41 299.0 18.9 249 232-501 11-266 (288)
317 cd07837 STKc_CdkB_plant Cataly 100.0 1.2E-36 2.7E-41 297.9 21.1 264 230-501 6-290 (295)
318 cd05579 STKc_MAST_like Catalyt 100.0 3.4E-37 7.3E-42 296.5 16.8 246 233-504 1-256 (265)
319 cd05611 STKc_Rim15_like Cataly 100.0 1.2E-36 2.6E-41 292.3 19.6 243 232-504 3-250 (260)
320 cd06606 STKc_MAPKKK Catalytic 100.0 3.2E-36 6.9E-41 288.4 22.5 247 230-501 5-256 (260)
321 PHA03390 pk1 serine/threonine- 100.0 4.7E-36 1E-40 289.5 23.8 249 218-501 8-261 (267)
322 cd07836 STKc_Pho85 Catalytic d 100.0 2.4E-36 5.3E-41 294.0 22.0 264 230-501 5-280 (284)
323 cd07840 STKc_CDK9_like Catalyt 100.0 3.4E-36 7.4E-41 293.2 22.7 264 230-501 4-283 (287)
324 cd08225 STKc_Nek5 Catalytic do 100.0 1E-36 2.3E-41 292.0 18.7 245 230-501 5-253 (257)
325 cd08215 STKc_Nek Catalytic dom 100.0 2.2E-36 4.7E-41 289.5 20.7 247 230-501 5-254 (258)
326 cd07835 STKc_CDK1_like Catalyt 100.0 1.7E-36 3.6E-41 295.1 20.2 262 230-501 4-279 (283)
327 KOG4250 TANK binding protein k 100.0 3.3E-37 7.3E-42 309.7 15.4 272 228-506 16-310 (732)
328 PTZ00024 cyclin-dependent prot 100.0 2.7E-36 5.8E-41 301.1 21.9 271 222-501 6-312 (335)
329 cd07831 STKc_MOK Catalytic dom 100.0 2.8E-36 6E-41 293.3 21.3 257 231-501 5-278 (282)
330 cd07845 STKc_CDK10 Catalytic d 100.0 2.1E-36 4.4E-41 298.4 20.7 263 230-501 12-289 (309)
331 cd08216 PK_STRAD Pseudokinase 100.0 2.8E-36 6.1E-41 298.1 21.4 260 234-501 11-294 (314)
332 cd05606 STKc_beta_ARK Catalyti 100.0 3.6E-36 7.7E-41 292.1 21.8 241 232-501 1-254 (278)
333 cd08226 PK_STRAD_beta Pseudoki 100.0 3.7E-36 8.1E-41 299.1 22.3 262 233-501 6-307 (328)
334 cd08530 STKc_CNK2-like Catalyt 100.0 1.8E-36 3.9E-41 290.1 18.8 245 230-501 5-252 (256)
335 PHA03210 serine/threonine kina 100.0 8.8E-37 1.9E-41 319.0 17.5 274 222-501 146-453 (501)
336 cd07865 STKc_CDK9 Catalytic do 100.0 3.3E-36 7E-41 296.9 20.4 265 230-501 17-306 (310)
337 PLN00009 cyclin-dependent kina 100.0 4.4E-36 9.6E-41 293.9 20.5 264 230-501 7-283 (294)
338 cd07838 STKc_CDK4_6_like Catal 100.0 1E-35 2.2E-40 290.0 22.9 262 230-501 4-283 (287)
339 cd05118 STKc_CMGC Catalytic do 100.0 3.9E-36 8.4E-41 292.3 19.9 259 231-501 5-279 (283)
340 PHA02882 putative serine/threo 100.0 4.7E-36 1E-40 293.6 20.4 261 222-504 9-294 (294)
341 cd06633 STKc_TAO3 Catalytic do 100.0 8.2E-36 1.8E-40 294.6 22.2 239 231-501 27-272 (313)
342 cd07849 STKc_ERK1_2_like Catal 100.0 2E-36 4.3E-41 302.0 17.8 266 224-502 5-292 (336)
343 KOG4645 MAPKKK (MAP kinase kin 100.0 3.2E-38 6.8E-43 333.9 4.9 254 222-502 1233-1494(1509)
344 cd06634 STKc_TAO2 Catalytic do 100.0 6.7E-36 1.5E-40 294.5 21.1 244 231-506 21-271 (308)
345 cd06653 STKc_MEKK3_like_1 Cata 100.0 9.6E-36 2.1E-40 286.8 21.5 246 229-501 6-260 (264)
346 cd07830 STKc_MAK_like Catalyti 100.0 7.3E-36 1.6E-40 290.5 20.4 263 230-501 4-279 (283)
347 cd06627 STKc_Cdc7_like Catalyt 100.0 1.2E-35 2.5E-40 284.0 21.2 243 230-501 5-250 (254)
348 cd06618 PKc_MKK7 Catalytic dom 100.0 4.7E-36 1E-40 294.0 18.8 246 230-502 20-273 (296)
349 cd07864 STKc_CDK12 Catalytic d 100.0 1.4E-35 3E-40 291.4 21.6 268 225-501 8-298 (302)
350 cd07852 STKc_MAPK15 Catalytic 100.0 3.8E-36 8.3E-41 300.2 17.9 264 230-502 12-295 (337)
351 cd07858 STKc_TEY_MAPK_plant Ca 100.0 3.8E-36 8.1E-41 300.1 17.7 263 230-502 10-291 (337)
352 KOG1024 Receptor-like protein 100.0 1.9E-36 4.2E-41 283.8 14.1 256 228-506 287-555 (563)
353 cd07855 STKc_ERK5 Catalytic do 100.0 3.8E-36 8.2E-41 299.8 17.1 262 230-501 10-293 (334)
354 KOG4236 Serine/threonine prote 100.0 6.1E-37 1.3E-41 296.4 10.3 244 230-501 569-818 (888)
355 cd05583 STKc_MSK_N N-terminal 100.0 1.4E-35 3.1E-40 289.3 19.7 252 230-506 5-267 (288)
356 cd05613 STKc_MSK1_N N-terminal 100.0 2.2E-35 4.8E-40 288.3 20.8 247 230-501 5-267 (290)
357 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.5E-35 3.3E-40 296.6 19.8 272 214-501 7-299 (345)
358 cd07879 STKc_p38delta_MAPK13 C 100.0 1.3E-35 2.8E-40 296.8 19.1 266 224-506 15-303 (342)
359 cd07834 STKc_MAPK Catalytic do 100.0 7.4E-36 1.6E-40 297.3 17.2 273 229-509 4-298 (330)
360 cd05581 STKc_PDK1 Catalytic do 100.0 1.2E-35 2.7E-40 288.2 17.9 244 230-501 6-276 (280)
361 cd07854 STKc_MAPK4_6 Catalytic 100.0 8.2E-36 1.8E-40 298.3 16.8 269 229-506 9-306 (342)
362 KOG0200 Fibroblast/platelet-de 100.0 1.2E-35 2.6E-40 315.3 18.9 255 230-506 301-579 (609)
363 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.9E-35 4.1E-40 293.7 19.2 265 221-502 7-288 (328)
364 cd08222 STKc_Nek11 Catalytic d 100.0 1.4E-35 3E-40 284.9 17.5 246 230-501 5-256 (260)
365 cd07829 STKc_CDK_like Catalyti 100.0 2.4E-35 5.2E-40 286.6 19.0 261 231-501 5-278 (282)
366 cd05123 STKc_AGC Catalytic dom 100.0 2.3E-35 5E-40 281.5 18.1 236 233-498 1-240 (250)
367 KOG1006 Mitogen-activated prot 100.0 1E-37 2.2E-42 278.7 1.4 262 212-501 59-326 (361)
368 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.4E-35 5.2E-40 294.9 17.9 265 221-501 12-297 (343)
369 KOG1035 eIF-2alpha kinase GCN2 100.0 1.4E-35 3E-40 312.5 15.7 254 221-501 476-870 (1351)
370 cd07866 STKc_BUR1 Catalytic do 100.0 6.2E-35 1.3E-39 287.9 19.0 269 225-501 9-307 (311)
371 cd07857 STKc_MPK1 Catalytic do 100.0 8.1E-35 1.7E-39 290.0 19.4 263 230-501 5-291 (332)
372 KOG0690 Serine/threonine prote 100.0 4.6E-36 1E-40 275.0 9.2 235 230-494 173-411 (516)
373 KOG0666 Cyclin C-dependent kin 100.0 7.3E-36 1.6E-40 272.3 10.3 202 228-433 27-243 (438)
374 cd05576 STKc_RPK118_like Catal 100.0 8.4E-35 1.8E-39 275.6 17.5 220 236-497 4-224 (237)
375 cd07851 STKc_p38 Catalytic dom 100.0 2.6E-35 5.6E-40 294.8 13.9 265 222-501 13-297 (343)
376 KOG0662 Cyclin-dependent kinas 100.0 9.3E-35 2E-39 245.4 13.9 261 232-501 9-282 (292)
377 KOG0669 Cyclin T-dependent kin 100.0 1.6E-36 3.4E-41 269.1 2.3 263 232-501 24-314 (376)
378 KOG0671 LAMMER dual specificit 100.0 2.4E-35 5.1E-40 276.6 9.6 262 228-501 92-405 (415)
379 KOG0696 Serine/threonine prote 100.0 4.1E-35 8.9E-40 276.4 10.6 234 231-494 355-593 (683)
380 KOG0603 Ribosomal protein S6 k 100.0 1E-34 2.2E-39 289.5 12.8 231 232-501 329-562 (612)
381 cd05610 STKc_MASTL Catalytic d 100.0 1.4E-33 3E-38 303.9 21.8 140 230-376 9-152 (669)
382 KOG0614 cGMP-dependent protein 100.0 1.3E-35 2.8E-40 286.4 4.4 235 232-495 427-665 (732)
383 KOG0612 Rho-associated, coiled 100.0 1.6E-34 3.4E-39 302.4 11.6 252 223-501 74-337 (1317)
384 smart00220 S_TKc Serine/Threon 100.0 3.7E-33 8E-38 264.2 18.5 238 237-501 1-240 (244)
385 KOG1151 Tousled-like protein k 100.0 3.8E-34 8.1E-39 272.0 11.1 251 231-501 469-740 (775)
386 KOG0587 Traf2- and Nck-interac 100.0 3.8E-33 8.2E-38 285.7 18.2 247 228-501 22-281 (953)
387 KOG1027 Serine/threonine prote 100.0 3E-34 6.5E-39 292.4 9.1 250 224-501 508-766 (903)
388 KOG0984 Mitogen-activated prot 100.0 1.4E-33 3E-38 243.5 10.9 198 232-435 53-257 (282)
389 PLN03224 probable serine/threo 100.0 4.2E-32 9E-37 278.6 20.3 263 224-501 145-499 (507)
390 PLN03225 Serine/threonine-prot 100.0 3.8E-32 8.3E-37 285.8 20.4 262 228-501 135-449 (566)
391 KOG0608 Warts/lats-like serine 100.0 4.1E-32 8.8E-37 268.1 13.5 242 227-494 631-917 (1034)
392 KOG0664 Nemo-like MAPK-related 100.0 4.6E-33 9.9E-38 249.7 2.1 265 230-503 58-344 (449)
393 KOG0695 Serine/threonine prote 100.0 1.9E-31 4.2E-36 245.6 12.4 242 230-494 255-502 (593)
394 KOG1290 Serine/threonine prote 100.0 1.7E-30 3.7E-35 250.4 18.6 129 227-361 80-221 (590)
395 KOG0668 Casein kinase II, alph 100.0 2.8E-31 6.1E-36 232.6 10.6 253 232-501 45-321 (338)
396 KOG0670 U4/U6-associated splic 100.0 1E-31 2.2E-36 260.2 8.3 272 220-501 427-745 (752)
397 cd00180 PKc Catalytic domain o 100.0 1.7E-29 3.7E-34 233.3 21.4 211 233-503 1-215 (215)
398 KOG0665 Jun-N-terminal kinase 100.0 2.8E-30 6.1E-35 237.2 10.5 255 232-501 24-309 (369)
399 KOG1152 Signal transduction se 100.0 1.4E-30 3.1E-35 255.2 9.0 190 231-431 567-770 (772)
400 KOG0576 Mitogen-activated prot 100.0 2.2E-30 4.8E-35 257.9 4.6 246 231-501 21-270 (829)
401 smart00221 STYKc Protein kinas 100.0 6.6E-28 1.4E-32 225.8 19.0 196 230-432 4-202 (225)
402 KOG1345 Serine/threonine kinas 100.0 3.4E-29 7.4E-34 224.8 8.9 248 228-502 27-284 (378)
403 cd03599 CLECT_DGCR2_like C-typ 100.0 1.5E-28 3.3E-33 211.1 12.5 124 9-146 1-153 (153)
404 KOG1167 Serine/threonine prote 100.0 1E-28 2.3E-33 235.2 11.0 267 221-501 33-380 (418)
405 cd03588 CLECT_CSPGs C-type lec 99.9 1.5E-27 3.1E-32 201.5 12.4 122 9-146 1-123 (124)
406 PLN00181 protein SPA1-RELATED; 99.9 5.9E-28 1.3E-32 266.6 8.8 196 277-501 28-264 (793)
407 cd03597 CLECT_attractin_like C 99.9 4.6E-27 1E-31 199.3 12.1 120 9-146 1-129 (129)
408 cd03589 CLECT_CEL-1_like C-typ 99.9 8.9E-27 1.9E-31 200.9 12.2 124 9-146 1-137 (137)
409 cd03596 CLECT_tetranectin_like 99.9 1E-26 2.2E-31 197.9 12.3 122 9-146 1-129 (129)
410 smart00750 KIND kinase non-cat 99.9 1.3E-26 2.8E-31 208.9 13.0 167 306-506 1-169 (176)
411 cd03590 CLECT_DC-SIGN_like C-t 99.9 7.3E-26 1.6E-30 192.2 13.2 124 9-146 1-126 (126)
412 PHA02642 C-type lectin-like pr 99.9 9.4E-26 2E-30 200.8 12.7 123 3-150 82-204 (216)
413 cd03594 CLECT_REG-1_like C-typ 99.9 1E-25 2.3E-30 192.1 11.6 122 9-146 1-129 (129)
414 KOG0195 Integrin-linked kinase 99.9 2E-26 4.3E-31 207.1 6.8 243 233-507 198-447 (448)
415 cd03593 CLECT_NK_receptors_lik 99.9 1.9E-25 4.1E-30 186.7 12.1 116 9-146 1-116 (116)
416 cd03598 CLECT_EMBP_like C-type 99.9 2.4E-24 5.2E-29 179.9 12.2 115 20-146 1-117 (117)
417 PHA02953 IEV and EEV membrane 99.9 1.1E-24 2.4E-29 190.2 10.4 117 6-147 44-167 (170)
418 cd03591 CLECT_collectin_like C 99.9 3.3E-24 7.2E-29 178.2 11.4 114 20-146 1-114 (114)
419 KOG1164 Casein kinase (serine/ 99.9 2.5E-23 5.5E-28 205.6 19.5 260 227-508 20-299 (322)
420 PRK09188 serine/threonine prot 99.9 7E-24 1.5E-28 209.0 14.6 164 222-404 16-194 (365)
421 cd03603 CLECT_VCBS A bacterial 99.9 1.4E-23 3E-28 175.2 12.7 113 21-145 1-117 (118)
422 cd03601 CLECT_TC14_like C-type 99.9 1.3E-23 2.8E-28 175.8 12.1 112 23-146 3-119 (119)
423 PHA03097 C-type lectin-like pr 99.9 2.2E-23 4.8E-28 180.7 12.9 115 5-148 42-156 (157)
424 COG0515 SPS1 Serine/threonine 99.9 6.4E-22 1.4E-26 195.6 24.0 258 230-502 5-275 (384)
425 KOG0590 Checkpoint kinase and 99.9 2.4E-24 5.3E-29 226.1 6.7 256 226-501 319-584 (601)
426 cd03592 CLECT_selectins_like C 99.9 2.8E-23 6.1E-28 173.0 11.2 111 23-146 3-115 (115)
427 TIGR00864 PCC polycystin catio 99.9 3.5E-23 7.6E-28 235.8 13.7 135 3-151 312-451 (2740)
428 KOG1165 Casein kinase (serine/ 99.9 1.9E-22 4.1E-27 186.5 15.4 255 229-505 32-298 (449)
429 smart00034 CLECT C-type lectin 99.9 1.8E-22 3.9E-27 171.0 12.5 121 9-145 1-126 (126)
430 KOG1163 Casein kinase (serine/ 99.9 2.3E-22 5.1E-27 178.1 12.1 200 228-436 18-227 (341)
431 cd05147 RIO1_euk RIO kinase fa 99.9 2.3E-22 4.9E-27 182.5 11.6 138 231-378 3-167 (190)
432 KOG1240 Protein kinase contain 99.9 2.6E-23 5.6E-28 218.1 6.0 249 230-508 28-297 (1431)
433 PRK10359 lipopolysaccharide co 99.9 2.1E-22 4.6E-27 184.7 11.2 175 219-424 25-216 (232)
434 cd03602 CLECT_1 C-type lectin 99.9 3.3E-22 7.2E-27 164.6 10.7 108 21-146 1-108 (108)
435 cd03595 CLECT_chondrolectin_li 99.9 5.9E-22 1.3E-26 172.4 11.9 116 17-146 7-149 (149)
436 cd05145 RIO1_like RIO kinase f 99.9 4.8E-21 1E-25 174.5 14.3 139 231-380 3-169 (190)
437 cd03600 CLECT_thrombomodulin_l 99.9 3.9E-21 8.4E-26 166.1 12.2 118 18-146 2-139 (141)
438 PF14531 Kinase-like: Kinase-l 99.9 5.1E-21 1.1E-25 180.8 13.8 231 229-493 16-288 (288)
439 PHA02867 C-type lectin protein 99.9 2.9E-21 6.2E-26 165.9 10.3 114 4-149 44-157 (167)
440 KOG1023 Natriuretic peptide re 99.8 7E-21 1.5E-25 191.0 12.5 217 275-508 1-226 (484)
441 KOG0603 Ribosomal protein S6 k 99.8 2.6E-22 5.7E-27 201.1 2.2 230 233-502 2-240 (612)
442 PRK12274 serine/threonine prot 99.8 3.8E-20 8.2E-25 166.1 14.1 186 230-434 7-211 (218)
443 PRK10345 hypothetical protein; 99.8 5.5E-20 1.2E-24 168.4 13.9 134 230-376 7-157 (210)
444 KOG4158 BRPK/PTEN-induced prot 99.8 1.1E-19 2.3E-24 172.1 12.0 197 279-503 274-511 (598)
445 KOG1166 Mitotic checkpoint ser 99.8 1.9E-19 4.1E-24 192.9 13.9 192 228-429 701-902 (974)
446 smart00090 RIO RIO-like kinase 99.8 2E-18 4.3E-23 162.0 13.9 141 226-378 29-198 (237)
447 TIGR03724 arch_bud32 Kae1-asso 99.8 2.3E-18 4.9E-23 158.4 13.1 131 232-378 1-139 (199)
448 PRK14879 serine/threonine prot 99.8 3E-18 6.5E-23 159.1 13.7 133 232-377 3-143 (211)
449 cd05144 RIO2_C RIO kinase fami 99.7 1.6E-17 3.4E-22 152.5 13.5 137 227-380 17-177 (198)
450 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.3E-18 2.9E-23 171.4 4.9 174 295-498 330-508 (516)
451 PRK09605 bifunctional UGMP fam 99.7 3.2E-17 7E-22 173.0 14.5 133 229-378 337-477 (535)
452 KOG0606 Microtubule-associated 99.7 3.4E-18 7.4E-23 179.9 6.1 204 229-494 87-304 (1205)
453 PRK01723 3-deoxy-D-manno-octul 99.7 3.6E-16 7.7E-21 147.1 13.5 137 229-378 35-192 (239)
454 cd05119 RIO RIO kinase family, 99.7 2.8E-16 6.1E-21 142.9 11.7 135 231-379 3-165 (187)
455 cd05120 APH_ChoK_like Aminogly 99.7 1.1E-15 2.5E-20 133.4 12.4 134 231-378 4-139 (155)
456 KOG0590 Checkpoint kinase and 99.6 2.1E-17 4.6E-22 173.9 0.3 249 231-500 26-284 (601)
457 cd00037 CLECT C-type lectin (C 99.6 1.5E-15 3.3E-20 126.0 11.3 113 21-146 1-116 (116)
458 PHA02911 C-type lectin-like pr 99.6 3.3E-15 7.1E-20 128.3 9.5 107 5-148 99-211 (213)
459 PF00059 Lectin_C: Lectin C-ty 99.6 2.3E-15 5.1E-20 122.8 5.9 100 28-146 1-105 (105)
460 KOG1266 Protein kinase [Signal 99.6 4E-15 8.7E-20 138.2 6.4 206 272-501 118-330 (458)
461 TIGR01982 UbiB 2-polyprenylphe 99.5 6.2E-14 1.4E-18 143.3 13.3 140 231-380 123-309 (437)
462 KOG0601 Cyclin-dependent kinas 99.5 3.4E-14 7.3E-19 143.2 6.6 242 232-501 121-378 (524)
463 KOG1243 Protein kinase [Genera 99.5 1.5E-12 3.2E-17 132.6 15.6 167 246-427 34-200 (690)
464 PRK04750 ubiB putative ubiquin 99.4 2.3E-13 5E-18 140.6 7.2 148 222-381 118-317 (537)
465 cd05151 ChoK Choline Kinase (C 99.4 1.7E-12 3.7E-17 115.9 9.8 129 232-377 5-136 (170)
466 cd05146 RIO3_euk RIO kinase fa 99.4 9.6E-12 2.1E-16 111.9 13.0 135 232-379 4-175 (197)
467 KOG0601 Cyclin-dependent kinas 99.2 6.6E-12 1.4E-16 126.8 5.8 248 221-504 262-516 (524)
468 cd05154 ACAD10_11_like Acyl-Co 99.2 7.9E-11 1.7E-15 109.9 12.3 142 231-377 4-206 (223)
469 COG3642 Mn2+-dependent serine/ 99.2 1.2E-10 2.6E-15 101.1 12.0 130 232-377 3-140 (204)
470 KOG3087 Serine/threonine prote 99.2 1.6E-10 3.5E-15 99.8 11.7 142 230-377 12-165 (229)
471 KOG3741 Poly(A) ribonuclease s 99.1 1.5E-09 3.3E-14 107.6 16.1 218 237-503 288-522 (655)
472 KOG0606 Microtubule-associated 99.1 2.4E-11 5.3E-16 129.0 2.8 242 231-497 810-1084(1205)
473 PF01163 RIO1: RIO1 family; I 99.1 8.5E-10 1.8E-14 99.0 10.3 125 240-378 1-156 (188)
474 PRK15123 lipopolysaccharide co 99.1 3.6E-09 7.9E-14 100.7 15.0 141 231-377 28-194 (268)
475 COG4248 Uncharacterized protei 99.0 5.2E-09 1.1E-13 101.3 12.4 267 229-509 15-303 (637)
476 PF05473 Herpes_UL45: UL45 pro 98.9 3.3E-09 7.2E-14 95.5 8.2 58 4-63 80-138 (200)
477 KOG2137 Protein kinase [Signal 98.8 8.1E-10 1.8E-14 113.4 1.2 152 331-501 105-264 (700)
478 COG0478 RIO-like serine/threon 98.8 3.6E-08 7.9E-13 91.0 10.9 132 230-377 96-251 (304)
479 PRK09902 hypothetical protein; 98.8 2E-07 4.3E-12 84.3 14.2 138 234-377 27-179 (216)
480 PF06293 Kdo: Lipopolysacchari 98.8 7.4E-08 1.6E-12 88.7 11.6 124 248-378 31-171 (206)
481 COG0661 AarF Predicted unusual 98.7 1.5E-07 3.2E-12 97.2 12.6 143 231-381 131-318 (517)
482 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 1.4E-06 3E-11 81.4 13.3 139 232-377 8-182 (226)
483 COG1718 RIO1 Serine/threonine 98.4 2.4E-06 5.2E-11 78.4 11.3 154 214-379 35-217 (268)
484 PF06176 WaaY: Lipopolysacchar 98.4 2.7E-06 5.9E-11 77.2 11.4 140 221-377 27-183 (229)
485 KOG0576 Mitogen-activated prot 98.3 1.9E-07 4.2E-12 95.2 2.0 180 233-431 250-431 (829)
486 cd05150 APH Aminoglycoside 3'- 98.3 8.5E-06 1.9E-10 77.2 12.4 140 234-377 7-193 (244)
487 KOG1235 Predicted unusual prot 98.3 4.4E-06 9.5E-11 86.1 10.7 141 231-381 167-358 (538)
488 PF01636 APH: Phosphotransfera 98.3 1E-05 2.2E-10 75.9 12.6 142 232-376 4-196 (239)
489 PF10707 YrbL-PhoP_reg: PhoP r 98.2 3.8E-05 8.2E-10 69.6 13.7 134 230-377 6-172 (199)
490 PF12260 PIP49_C: Protein-kina 98.1 1.3E-05 2.8E-10 72.4 8.7 105 269-378 7-112 (188)
491 PLN02876 acyl-CoA dehydrogenas 98.1 4E-05 8.6E-10 85.4 14.3 149 231-379 44-259 (822)
492 PRK10593 hypothetical protein; 98.1 7.2E-05 1.6E-09 72.9 14.5 76 230-308 19-100 (297)
493 COG2112 Predicted Ser/Thr prot 98.1 4.1E-05 8.8E-10 66.6 10.5 127 230-377 27-155 (201)
494 KOG1035 eIF-2alpha kinase GCN2 98.0 2.5E-05 5.5E-10 85.3 9.3 197 267-503 228-435 (1351)
495 cd05155 APH_ChoK_like_1 Unchar 97.9 6.7E-05 1.4E-09 70.7 10.8 71 233-309 5-82 (235)
496 cd05157 ETNK_euk Ethanolamine 97.8 0.00024 5.2E-09 66.9 12.0 72 232-308 5-79 (235)
497 PRK09550 mtnK methylthioribose 97.8 0.00035 7.6E-09 70.3 13.5 75 231-307 32-117 (401)
498 TIGR00938 thrB_alt homoserine 97.8 0.00024 5.2E-09 69.8 12.2 161 214-377 7-217 (307)
499 PF13095 FTA2: Kinetochore Sim 97.7 0.00043 9.4E-09 62.3 11.8 120 230-375 42-206 (207)
500 PRK05231 homoserine kinase; Pr 97.7 0.0013 2.8E-08 65.0 15.4 160 214-377 7-217 (319)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-54 Score=427.06 Aligned_cols=291 Identities=43% Similarity=0.748 Sum_probs=252.3
Q ss_pred CccccCHHHHHHHhhCcccCCceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeE
Q 010309 210 SWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 289 (513)
Q Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~ 289 (513)
..+.|+++|+..+|++|...+ +||+|+||.||+|.+++|+.||||++.........+|.+|+.++.+++|||+|+|+|+
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~-~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESN-LIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhc-ceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 577899999999999999876 4599999999999999999999998877643315569999999999999999999999
Q ss_pred EeeCCc-eEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeE
Q 010309 290 CYDHGD-RYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 368 (513)
Q Consensus 290 ~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~k 368 (513)
|.+.+. .+||+|||++|+|.++|...... .++|..+++|+.++|+||+|||+.+.+.||||||||+|||||+++++|
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 999994 99999999999999999863322 899999999999999999999999888999999999999999999999
Q ss_pred EecccccccCCc-cccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhH
Q 010309 369 LMGVGLSKFVPW-EVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATP 447 (513)
Q Consensus 369 l~Dfg~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 447 (513)
|+|||+|+.... ........ .||.+|+|||++..+..+.|+|||||||+|+||+||+.|.+.........+.+|+.+
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~--~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~ 295 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTV--MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKP 295 (361)
T ss_pred ccCccCcccCCccccceeeec--CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHH
Confidence 999999976654 22111110 499999999999999999999999999999999999998876554445568999999
Q ss_pred HhhcccccccccccccCCCCCCCc-HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcC
Q 010309 448 LVQSHRYLELLDPLISSLSSDIPE-AGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQ 508 (513)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 508 (513)
.....++.+++|+.+.. .... ......+..+..+|++.+|.+||+|.+|++.|+.+..
T Consensus 296 ~~~~~~~~eiiD~~l~~---~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 296 LLEEGKLREIVDPRLKE---GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHHCcchhheeCCCccC---CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 99999999999998853 2222 2567779999999999999999999999999976553
No 2
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-50 Score=375.64 Aligned_cols=246 Identities=25% Similarity=0.438 Sum_probs=207.5
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEeccc-chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCc-eEEEEeeccCCC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGD-RYIVYEFVVNGP 307 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~-~~lv~e~~~~gs 307 (513)
..||+|..|+||++.++ +++.+|+|++... .....+++.+|+++++..+||+||++||.|...+. ..|+||||++|+
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGS 164 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGS 164 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCC
Confidence 35799999999999975 6889999999544 34556889999999999999999999999999995 999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD-KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
|++++.. .+.+++...-+|+.+|++||.|||+ . +||||||||+|||++..|.+||+|||.+..+....
T Consensus 165 Ld~~~k~----~g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~---- 233 (364)
T KOG0581|consen 165 LDDILKR----VGRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSI---- 233 (364)
T ss_pred HHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccccHHhhhhh----
Confidence 9999964 3669999999999999999999996 6 99999999999999999999999999999876552
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....||..|||||.+.+..|+.++||||||++++|+.+|+.||....+. ... ..+++..+..+.+
T Consensus 234 a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~-~~~-------------~~~Ll~~Iv~~pp 299 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP-YLD-------------IFELLCAIVDEPP 299 (364)
T ss_pred cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC-CCC-------------HHHHHHHHhcCCC
Confidence 22334999999999999999999999999999999999999999764111 111 1122233333333
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+..|...+++++.+|+..||++||.+|||+.|+++
T Consensus 300 P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 300 PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 44444458899999999999999999999999986
No 3
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-49 Score=392.24 Aligned_cols=247 Identities=23% Similarity=0.379 Sum_probs=212.3
Q ss_pred CcccCCceecccCceEEEEEEe-CCCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEE
Q 010309 225 NFSEGNRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVY 300 (513)
Q Consensus 225 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 300 (513)
..++..++||+|+|+.+|.++. ..|+.||+|++.+.. ....+.+.+|+++.++|+|||||+++++|++.++.|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4567788999999999999997 789999999998752 344678999999999999999999999999999999999
Q ss_pred eeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCc
Q 010309 301 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 380 (513)
Q Consensus 301 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~ 380 (513)
|+|+.++|..+++ .++.+++.+++.+++||+.||.|||+. +|+|||||..|+||+++.++||+|||+|..+..
T Consensus 98 ELC~~~sL~el~K----rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLK----RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHH----hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 9999999999985 357899999999999999999999999 999999999999999999999999999998865
Q ss_pred cccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 381 EVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 381 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
+.. .....+|||.|+|||++....++..+||||+||++|.||+|++||+..+-.+ ... . +...
T Consensus 171 ~~E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke---ty~---~-Ik~~-------- 233 (592)
T KOG0575|consen 171 DGE--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE---TYN---K-IKLN-------- 233 (592)
T ss_pred ccc--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH---HHH---H-HHhc--------
Confidence 432 3344569999999999999999999999999999999999999998653211 111 0 0000
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.-..+...+.+..+||.++|+.||.+|||+++|+.
T Consensus 234 ------~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 234 ------EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ------CcccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11223356778999999999999999999999986
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=6e-49 Score=386.60 Aligned_cols=251 Identities=30% Similarity=0.518 Sum_probs=206.8
Q ss_pred eecccCceEEEEEEeCCCCEEEEEEecccchhc--HHHHHHHHHHHhhcCCCcEeeeeeEEeeCC-ceEEEEeeccCCCH
Q 010309 232 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQR--KKEFYSEIGRFARLHHPNLVAVKGCCYDHG-DRYIVYEFVVNGPL 308 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~lv~e~~~~gsL 308 (513)
.||.|+||+||+|.+.....||||++....... .++|.+|+.+|.+++|||||+++|++.+.. ..+|||||+++|+|
T Consensus 48 ~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL 127 (362)
T KOG0192|consen 48 VLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSL 127 (362)
T ss_pred hcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcH
Confidence 379999999999999444449999998654332 568999999999999999999999999988 79999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-ceEcCCCCCceEecCCC-CeEEecccccccCCccccccc
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH-VVHRDIRASNVLLDEEF-GAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~-ivH~Dikp~NIll~~~~-~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
.++++.. ....+++..++.++.|||.||.|||++ + ||||||||+|||++.++ ++||+|||+++...... ..
T Consensus 128 ~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~ 200 (362)
T KOG0192|consen 128 SVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--TS 200 (362)
T ss_pred HHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc--cc
Confidence 9999763 357899999999999999999999999 7 99999999999999997 99999999998765432 11
Q ss_pred eeecCcccccccccccc--cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 387 TVMAGGTYGYLAPEFVY--RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~--~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
.....||+.|||||++. ...|+.|+||||||++||||+||+.||...... ..+........ .
T Consensus 201 ~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~------~~~~~v~~~~~-----R----- 264 (362)
T KOG0192|consen 201 MTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV------QVASAVVVGGL-----R----- 264 (362)
T ss_pred ccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhcCC-----C-----
Confidence 11234999999999999 568999999999999999999999999886542 11111111111 1
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcC
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQ 508 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 508 (513)
+.. +..+++.+..||.+||+.||..||++.+++..|+.+..
T Consensus 265 --p~~-p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 265 --PPI-PKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred --CCC-CccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 111 22266779999999999999999999999999986643
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-49 Score=375.51 Aligned_cols=254 Identities=23% Similarity=0.331 Sum_probs=207.6
Q ss_pred HhhCcccCCceecccCceEEEEEEe-CCCCEEEEEEecccchh-------cHHHHHHHHHHHhhcCCCcEeeeeeEEeeC
Q 010309 222 ITKNFSEGNRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSFQ-------RKKEFYSEIGRFARLHHPNLVAVKGCCYDH 293 (513)
Q Consensus 222 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 293 (513)
..++++...+.||+|+||.|-+|.. ++|+.||||++++.... ....+.+|+++|++|+|||||++++++...
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ 248 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP 248 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence 3677888888999999999999985 46999999999865322 223467999999999999999999999999
Q ss_pred CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC---CCeEEe
Q 010309 294 GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE---FGAHLM 370 (513)
Q Consensus 294 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~---~~~kl~ 370 (513)
+..||||||++||+|.+++-. .+.+.+..-..+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+
T Consensus 249 ds~YmVlE~v~GGeLfd~vv~----nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKIt 321 (475)
T KOG0615|consen 249 DSSYMVLEYVEGGELFDKVVA----NKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKIT 321 (475)
T ss_pred CceEEEEEEecCccHHHHHHh----ccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEec
Confidence 999999999999999999854 45688888899999999999999999 99999999999999766 779999
Q ss_pred cccccccCCccccccceeecCcccccccccccccCCC---CchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhH
Q 010309 371 GVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNEL---TTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATP 447 (513)
Q Consensus 371 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 447 (513)
|||+|+.... .......+||+.|.|||++.+..+ ..+.|+||+||+||-+++|.+||+...... .+.+
T Consensus 322 DFGlAK~~g~---~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl~e---- 392 (475)
T KOG0615|consen 322 DFGLAKVSGE---GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SLKE---- 392 (475)
T ss_pred ccchhhcccc---ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cHHH----
Confidence 9999998752 233445679999999999987543 348899999999999999999998754431 1111
Q ss_pred HhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 448 LVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.+..+++.. .......++++..+||.+||..||++|||++|+|+
T Consensus 393 QI~~G~y~f----------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 393 QILKGRYAF----------GPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred HHhcCcccc----------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 111111110 11224578899999999999999999999999986
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-49 Score=386.51 Aligned_cols=251 Identities=28% Similarity=0.464 Sum_probs=214.1
Q ss_pred eecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHHH
Q 010309 232 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 311 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 311 (513)
-||+|.||.||.|.++....||+|.++... ...+.|.+|+++|++|+|+|||+++++|..++.+|||||||+.|+|.++
T Consensus 213 ~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~y 291 (468)
T KOG0197|consen 213 ELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDY 291 (468)
T ss_pred HhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHH
Confidence 479999999999999777799999998763 4557888999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeecC
Q 010309 312 LHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG 391 (513)
Q Consensus 312 l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 391 (513)
|+. ..+..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..+||+|||+|+....+....... ..
T Consensus 292 Lr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~-~k 365 (468)
T KOG0197|consen 292 LRT--REGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEG-GK 365 (468)
T ss_pred hhh--cCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCceeecCC-CC
Confidence 986 4567799999999999999999999999 99999999999999999999999999999655444333222 22
Q ss_pred cccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCC
Q 010309 392 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIP 470 (513)
Q Consensus 392 gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (513)
-+..|.|||.+..+.++.|||||||||+||||+| |+.||...+..+....++ .. ..-..
T Consensus 366 fPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le------~G--------------yRlp~ 425 (468)
T KOG0197|consen 366 FPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLE------RG--------------YRLPR 425 (468)
T ss_pred CCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHh------cc--------------CcCCC
Confidence 5678999999999999999999999999999999 999988776532211111 11 12223
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCC
Q 010309 471 EAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQP 509 (513)
Q Consensus 471 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 509 (513)
+..+++++.++|..||+.+|++|||++.+...|+.+...
T Consensus 426 P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 426 PEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 445788999999999999999999999999999887654
No 7
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.2e-50 Score=359.15 Aligned_cols=252 Identities=24% Similarity=0.371 Sum_probs=210.2
Q ss_pred eecccCceEEEEEE-eCCCCEEEEEEeccc--chhcHHHHHHHHHHHhhcCCCcEeeeee-EEeeCCc-eEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGI-LPDGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKG-CCYDHGD-RYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~-~~~~~~~-~~lv~e~~~~g 306 (513)
.||.|+||+||++. ..+|..||.|.++.. +....+++..|+.+|++|+|||||++++ .+.+++. .+||||+|.+|
T Consensus 26 ~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~G 105 (375)
T KOG0591|consen 26 KIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAG 105 (375)
T ss_pred HHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhccc
Confidence 56999999999998 468999999999855 3445678999999999999999999999 4555555 89999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKP-HVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
+|...++...+.++.+++..+++++.|++.||.++|+.... -|+||||||.||+|+.+|.+||+|||+++.+.......
T Consensus 106 DLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA 185 (375)
T KOG0591|consen 106 DLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFA 185 (375)
T ss_pred CHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHH
Confidence 99999998888889999999999999999999999994211 38999999999999999999999999999987654333
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
. ...|||.||+||.+.+.+|+.||||||+||++|||..-.+||.+.+- .+.... +-++.
T Consensus 186 ~--S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~------~~L~~K-------------I~qgd 244 (375)
T KOG0591|consen 186 H--SLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNL------LSLCKK-------------IEQGD 244 (375)
T ss_pred H--hhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccH------HHHHHH-------------HHcCC
Confidence 2 23399999999999999999999999999999999999999987531 111111 11111
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
.+..|...++.++..||..|+..||+.||+...++..+.
T Consensus 245 ~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 245 YPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred CCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 233455778999999999999999999999666665554
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-48 Score=366.07 Aligned_cols=201 Identities=26% Similarity=0.472 Sum_probs=178.3
Q ss_pred CcccCCceecccCceEEEEEEeC-CCCEEEEEEeccc--chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEe
Q 010309 225 NFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYE 301 (513)
Q Consensus 225 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 301 (513)
+|....+ ||.|+||+||+|+++ ++..||||.+.+. ..+..+.+..|+.+|+.++|||||.+++++..++..|||||
T Consensus 11 ~y~~~~~-iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 11 DYELSRE-IGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred cceehhh-ccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 4444444 699999999999975 5899999999877 44456778999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC------CCeEEeccccc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE------FGAHLMGVGLS 375 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~------~~~kl~Dfg~~ 375 (513)
||.||+|.+||+. .+.+++..++.++.|||.||++||++ +||||||||+||||+.. -.+||+|||+|
T Consensus 90 yC~gGDLs~yi~~----~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 90 YCNGGDLSDYIRR----RGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred eCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 9999999999975 35799999999999999999999999 99999999999999764 45899999999
Q ss_pred ccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcc
Q 010309 376 KFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSV 436 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~ 436 (513)
+.+....... ..+|++.|||||++....|+.|+|+||+|+|||++++|+.||...+..
T Consensus 163 R~L~~~~~a~---tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~ 220 (429)
T KOG0595|consen 163 RFLQPGSMAE---TLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK 220 (429)
T ss_pred hhCCchhHHH---HhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH
Confidence 9987554433 345999999999999999999999999999999999999999876654
No 9
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-47 Score=393.40 Aligned_cols=257 Identities=27% Similarity=0.407 Sum_probs=214.0
Q ss_pred CceecccCceEEEEEEeC------CCCEEEEEEecccchh-cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 230 NRLLGDSKTGGTYSGILP------DGSRVAVKRLKRSSFQ-RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
.+-||+|+||+||+|... +...||||.++..... ..++|++|+++|..|+|||||+|+|+|.+++..++|+||
T Consensus 491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEY 570 (774)
T KOG1026|consen 491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEY 570 (774)
T ss_pred hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEe
Confidence 345799999999999953 3567999999987555 678999999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCC------C----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecc
Q 010309 303 VVNGPLDRWLHHIPR------G----GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGV 372 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~------~----~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 372 (513)
|..|||.+||..... . ..+++..+.+.|+.|||.||.||-++ .+|||||..+|+||.++..|||+||
T Consensus 571 m~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~VKIsDf 647 (774)
T KOG1026|consen 571 MDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVVKISDF 647 (774)
T ss_pred cccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEEEeccc
Confidence 999999999964321 1 23488999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhc
Q 010309 373 GLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQS 451 (513)
Q Consensus 373 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 451 (513)
|+++..-..+........--.++|||||.++.+++|.+||||||||+|||++| |+.||.+....+. ...+..
T Consensus 648 GLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV-------Ie~i~~ 720 (774)
T KOG1026|consen 648 GLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV-------IECIRA 720 (774)
T ss_pred ccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH-------HHHHHc
Confidence 99997655443332211114689999999999999999999999999999999 9999988765321 112222
Q ss_pred ccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCC
Q 010309 452 HRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQP 509 (513)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 509 (513)
+++ -..+.+++.+++.||..||+.+|++||++.||-..|+...+.
T Consensus 721 g~l-------------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 721 GQL-------------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred CCc-------------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 221 122445778899999999999999999999999999876543
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-46 Score=349.98 Aligned_cols=238 Identities=22% Similarity=0.313 Sum_probs=199.5
Q ss_pred cCCceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 228 EGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
+.-++||+|+||.||.++.. +++.+|+|++++... ...+....|..+|.+++||.||++...|++.+.+|||+||+
T Consensus 28 ~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~ 107 (357)
T KOG0598|consen 28 EILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYL 107 (357)
T ss_pred eeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEecc
Confidence 34567899999999999965 589999999987633 34567889999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
.||.|..+|++ .+.+++..+.-++..|+.||.|||++ +||||||||+|||||.+|+++|+|||+++..-....
T Consensus 108 ~GGeLf~hL~~----eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~ 180 (357)
T KOG0598|consen 108 NGGELFYHLQR----EGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD 180 (357)
T ss_pred CCccHHHHHHh----cCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence 99999999964 46799999999999999999999999 999999999999999999999999999986543322
Q ss_pred ccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 384 QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
.+...+||+.|||||++.+..|+..+|-||||+++|||++|.+||...+..... ..... .+
T Consensus 181 --~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~------~~I~~-~k---------- 241 (357)
T KOG0598|consen 181 --ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMY------DKILK-GK---------- 241 (357)
T ss_pred --ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHH------HHHhc-Cc----------
Confidence 223356999999999999999999999999999999999999999876542111 11111 00
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCC
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRP 494 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 494 (513)
...++.-.+.+.++++.++|+.||++|.
T Consensus 242 ---~~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 242 ---LPLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred ---CCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 0112223566799999999999999996
No 11
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-47 Score=380.70 Aligned_cols=259 Identities=25% Similarity=0.401 Sum_probs=219.6
Q ss_pred ccCCceecccCceEEEEEEeCC----CCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEe
Q 010309 227 SEGNRLLGDSKTGGTYSGILPD----GSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYE 301 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 301 (513)
....++||.|.||.|++|+++- ...||||.++... .+.+.+|+.|+.||.+++||||++|.|+.......+||+|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 3456889999999999999753 4579999998763 4456789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
||++|+|+.||+.. ...++..+...++++|+.||.||-++ ++|||||.++|||++.+..+|++|||+++.+..+
T Consensus 711 yMENGsLDsFLR~~---DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 711 YMENGSLDSFLRQN---DGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred hhhCCcHHHHHhhc---CCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecccC
Confidence 99999999999853 35699999999999999999999999 9999999999999999999999999999987655
Q ss_pred ccccce-eecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhccccccccc
Q 010309 382 VMQERT-VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLD 459 (513)
Q Consensus 382 ~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (513)
.....+ ....-+.+|.|||.+...+++.+|||||||+++||.++ |..||.+++..+..+.++
T Consensus 785 ~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe---------------- 848 (996)
T KOG0196|consen 785 PEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE---------------- 848 (996)
T ss_pred CCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHH----------------
Confidence 422211 11113579999999999999999999999999999887 999998876532211111
Q ss_pred ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCCCC
Q 010309 460 PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQPPV 511 (513)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 511 (513)
......++.+++..|.+||..||++|-.+||++.+|+..|+++...|.
T Consensus 849 ----~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~ 896 (996)
T KOG0196|consen 849 ----QGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN 896 (996)
T ss_pred ----hccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence 111445677889999999999999999999999999999999877764
No 12
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-45 Score=355.94 Aligned_cols=244 Identities=22% Similarity=0.324 Sum_probs=203.8
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
.++||+|+|++|++|+.. .++.||||++.+.- ....+.+..|-.+|.+| .||.|++|+-.|.+...+|+|+||++
T Consensus 78 g~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~ 157 (604)
T KOG0592|consen 78 GKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAP 157 (604)
T ss_pred hheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecC
Confidence 457899999999999954 69999999997752 23345677888999999 89999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+|+|.++|.+ -+.+++...+.++.+|+.||+|||++ |||||||||+|||||.++++||+|||.|+.+......
T Consensus 158 nGdll~~i~K----~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 158 NGDLLDLIKK----YGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred CCcHHHHHHH----hCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCChhhcc
Confidence 9999999975 36799999999999999999999999 9999999999999999999999999999988644222
Q ss_pred -----------cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccc
Q 010309 385 -----------ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHR 453 (513)
Q Consensus 385 -----------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 453 (513)
.......||..|.+||++.....++.+|||+||||||.|+.|.+||.+.++-. ++..+..
T Consensus 231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl---iFqkI~~------ 301 (604)
T KOG0592|consen 231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL---IFQKIQA------ 301 (604)
T ss_pred ccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH---HHHHHHH------
Confidence 11123459999999999999999999999999999999999999998766421 1111100
Q ss_pred ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 454 YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
- .-..+.++++.+.+||.+.|..||.+|+|+++|.+
T Consensus 302 ------l------~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 302 ------L------DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred ------h------cccCCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 0 11122345577999999999999999999988865
No 13
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-45 Score=348.94 Aligned_cols=249 Identities=24% Similarity=0.433 Sum_probs=198.5
Q ss_pred CCceecccCceEEEEEEeCC-CCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCC--ceEEEEeeccC
Q 010309 229 GNRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG--DRYIVYEFVVN 305 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~lv~e~~~~ 305 (513)
..+.||+|+||.||++...+ |...|||.+........+.+.+|+.+|.+|+|||||+++|...... .++++|||+++
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~ 100 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPG 100 (313)
T ss_pred hhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCC
Confidence 35578999999999999754 8999999997664333677999999999999999999999855544 58999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecC-CCCeEEecccccccCCcc-cc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE-EFGAHLMGVGLSKFVPWE-VM 383 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~Dfg~~~~~~~~-~~ 383 (513)
|+|.+++... ++ .+++..++.+.+||++||.|||++ +|+|+||||+|||++. ++.+||+|||++...... ..
T Consensus 101 GsL~~~~~~~--g~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~ 174 (313)
T KOG0198|consen 101 GSLSDLIKRY--GG-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK 174 (313)
T ss_pred CcHHHHHHHc--CC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccccccc
Confidence 9999999752 22 699999999999999999999999 9999999999999999 799999999999877641 11
Q ss_pred ccceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCC-CccccchhHHhhhHHhhccccccccccc
Q 010309 384 QERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAV-DSVCWQSIFEWATPLVQSHRYLELLDPL 461 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (513)
........||+.|||||++..+ ....++|||||||++.||+||++||... .. .+......... .
T Consensus 175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~------~~~~~~ig~~~--------~ 240 (313)
T KOG0198|consen 175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE------AEALLLIGRED--------S 240 (313)
T ss_pred ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch------HHHHHHHhccC--------C
Confidence 1222234499999999999864 3345999999999999999999998763 11 01111100000 0
Q ss_pred ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 462 ISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
. +. .+...+++..+|+.+|+..||++||||+++|+.
T Consensus 241 ~----P~-ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 241 L----PE-IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred C----CC-CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 0 11 123367789999999999999999999999974
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.8e-45 Score=332.77 Aligned_cols=261 Identities=19% Similarity=0.240 Sum_probs=199.6
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.+|+|+||.||+.+.+ +|+.||||++.... ..-.+-.++|+++|++|+|||+|.++++|......+||+|||+..-|
T Consensus 9 kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL 88 (396)
T KOG0593|consen 9 KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVL 88 (396)
T ss_pred ccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHHH
Confidence 4599999999999976 49999999997653 23346678999999999999999999999999999999999977555
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+ |... ...++...+.+++.|++.|+.|+|++ ++|||||||+||||+.++.+||+|||+|+.+.......+
T Consensus 89 ~e-Le~~---p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YT-- 159 (396)
T KOG0593|consen 89 HE-LERY---PNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYT-- 159 (396)
T ss_pred HH-HHhc---cCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCCcchhh--
Confidence 44 4432 35699999999999999999999999 999999999999999999999999999998874322222
Q ss_pred ecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHh--------hhHHhh-cccccccc
Q 010309 389 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEW--------ATPLVQ-SHRYLELL 458 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~ 458 (513)
....|..|.|||++.+ .+|+...||||+||++.||++|.+.|.+.++.+....+.. ...+.. ...+..+.
T Consensus 160 DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~ 239 (396)
T KOG0593|consen 160 DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR 239 (396)
T ss_pred hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeee
Confidence 1227999999999988 6899999999999999999999999988766432221111 111111 11111111
Q ss_pred cccccCCCC-CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 459 DPLISSLSS-DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 459 ~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
-|......+ ...-...+.-+.+|++.||+.||.+|++.++++.
T Consensus 240 lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 240 LPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111100000 0001235567899999999999999999999875
No 15
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-44 Score=348.89 Aligned_cols=262 Identities=21% Similarity=0.272 Sum_probs=203.7
Q ss_pred ceecccCceEEEEEEe-CCCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--CceEEEEeeccC
Q 010309 231 RLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH--GDRYIVYEFVVN 305 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lv~e~~~~ 305 (513)
+.||+|.||.||+|+. .+|+.||+|++.... ........+|+.+|++|+||||++|.+...+. ..+|||+|||++
T Consensus 123 ~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh 202 (560)
T KOG0600|consen 123 EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH 202 (560)
T ss_pred HHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc
Confidence 3569999999999995 579999999998764 33346678999999999999999999998877 689999999965
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
+|..++.. ..-.+++.++..++.||+.||+|+|++ +|+|||||.+|||||.+|.+||+|||+|+++.......
T Consensus 203 -DL~GLl~~---p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~ 275 (560)
T KOG0600|consen 203 -DLSGLLSS---PGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAP 275 (560)
T ss_pred -hhhhhhcC---CCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCCCCcc
Confidence 89888863 346799999999999999999999999 99999999999999999999999999999876654333
Q ss_pred ceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccc-------cc
Q 010309 386 RTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYL-------EL 457 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 457 (513)
.+ ...-|..|.|||++.+. .|+.+.|+||.||||.||++|++.|.+.++.+....+-....-.....+. ..
T Consensus 276 ~T-~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~ 354 (560)
T KOG0600|consen 276 YT-SRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATI 354 (560)
T ss_pred cc-cceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccc
Confidence 22 22379999999999875 79999999999999999999999999987654332221111100111111 11
Q ss_pred ccccccCCCC--CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 458 LDPLISSLSS--DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 458 ~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+.+... ... ...-...+....+|+..+|..||.+|.|+.++|+
T Consensus 355 ~kp~~~-y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 355 FKPQQP-YKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cCCCCc-ccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 111000 000 0001234567899999999999999999999985
No 16
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-44 Score=349.57 Aligned_cols=265 Identities=24% Similarity=0.344 Sum_probs=214.0
Q ss_pred CcccCCceecccCceEEEEEEeCCCCEEEEEEecccchhc-HHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 225 NFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQR-KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 225 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
.-....+.||+|.||+|.+.....+.+||||.++...... ..+|.+|+++|.+|+||||+.++|+|..++.+++++|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 3333445679999999999999778999999999875444 489999999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
++|+|.+|+...... .+.-.....|+.||++||+||.+. ++|||||.++|+|++.++++||+|||+++.+-....
T Consensus 618 EnGDLnqFl~aheap--t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELP--TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred hcCcHHHHHHhccCc--ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCc
Confidence 999999999764222 245566678999999999999999 999999999999999999999999999997765554
Q ss_pred ccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCccccchhHHhhhHHhhccccccccccc
Q 010309 384 QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS--GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPL 461 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (513)
........-+++|||||.+..++++.+||||+||+++||+++ ...||+...++ +.++....+.........
T Consensus 693 y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e---~vven~~~~~~~~~~~~~---- 765 (807)
T KOG1094|consen 693 YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE---QVVENAGEFFRDQGRQVV---- 765 (807)
T ss_pred eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH---HHHHhhhhhcCCCCccee----
Confidence 444433336789999999999999999999999999999886 77898776543 223322222221111111
Q ss_pred ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 462 ISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
...+.-++..+.++|.+||..|-++||++++|...|++.+
T Consensus 766 ------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 766 ------LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred ------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 1112346778999999999999999999999999887654
No 17
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-44 Score=355.62 Aligned_cols=246 Identities=23% Similarity=0.395 Sum_probs=209.6
Q ss_pred cCCceecccCceEEEEEEe-CCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 228 EGNRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
...+.||+|+.|.||.|.. .+++.||||++.......++-+.+|+.+|+..+|+|||.+++.+...+++++|||||+||
T Consensus 276 ~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~gg 355 (550)
T KOG0578|consen 276 TDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGG 355 (550)
T ss_pred cchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCC
Confidence 3345579999999999984 468899999999887777888999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+.+.. ..+++.++..|+++++.||+|||.+ +|+|||||.+|||++.++.+||+|||++..+........
T Consensus 356 sLTDvVt~-----~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~ 427 (550)
T KOG0578|consen 356 SLTDVVTK-----TRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS 427 (550)
T ss_pred chhhhhhc-----ccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccCccc
Confidence 99999865 4599999999999999999999999 999999999999999999999999999998876554222
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
...||+.|||||++....|+++.||||||++++||+-|.+||-..++. +.+.. +... -.+
T Consensus 428 --TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl--rAlyL-----Ia~n-----g~P------ 487 (550)
T KOG0578|consen 428 --TMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--RALYL-----IATN-----GTP------ 487 (550)
T ss_pred --cccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH--HHHHH-----Hhhc-----CCC------
Confidence 233999999999999999999999999999999999999999864432 11111 1100 011
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....+...++.+.+|+.+||+.||.+||++.|+|+
T Consensus 488 ~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 488 KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 12223457788999999999999999999999997
No 18
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-44 Score=384.89 Aligned_cols=262 Identities=31% Similarity=0.437 Sum_probs=215.4
Q ss_pred CcccCCceecccCceEEEEEEeCC--CC----EEEEEEeccc-chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceE
Q 010309 225 NFSEGNRLLGDSKTGGTYSGILPD--GS----RVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRY 297 (513)
Q Consensus 225 ~~~~~~~~lg~G~~g~Vy~~~~~~--~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 297 (513)
.--...+.||+|+||.||.|...+ |. .||||.+++. +.+...+|.+|..+|+.++|||||+++|++.+....+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 334456789999999999999643 43 4999999876 4566789999999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCCC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccc
Q 010309 298 IVYEFVVNGPLDRWLHHIPR---GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGL 374 (513)
Q Consensus 298 lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 374 (513)
|++|||++|+|..||++.+. ....++..+.+.++.|||+|+.||+++ ++|||||.++|+||+....|||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccch
Confidence 99999999999999986421 245689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhccc
Q 010309 375 SKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHR 453 (513)
Q Consensus 375 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 453 (513)
|+.+.............-...|||||.+..+.++.|+|||||||+|||++| |..||...+..+... .....+
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~------~~~~gg- 921 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL------DVLEGG- 921 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH------HHHhCC-
Confidence 995543333222221224578999999999999999999999999999999 999998766532111 111111
Q ss_pred ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCC
Q 010309 454 YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQP 509 (513)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 509 (513)
.-.++..+++.+.++|.+||+.+|++||++..|++++..+...
T Consensus 922 -------------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 922 -------------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred -------------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 2233456788899999999999999999999999998877554
No 19
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=337.91 Aligned_cols=259 Identities=20% Similarity=0.308 Sum_probs=207.5
Q ss_pred ccCCceecccCceEEEEEE-eCCCCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 227 SEGNRLLGDSKTGGTYSGI-LPDGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
++....||.|..++||+|+ .+.++.||||++..+.- ...+.+.+|+..|+.++||||++++..|..+..+++||.||.
T Consensus 28 YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa 107 (516)
T KOG0582|consen 28 YELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMA 107 (516)
T ss_pred eeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhc
Confidence 4556678999999999999 46789999999976533 335889999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+|++.+++..... ..+++..+..|++++++||.|||.+ |.||||||+.||||+.+|.|||+|||.+..+......
T Consensus 108 ~GS~ldIik~~~~--~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R 182 (516)
T KOG0582|consen 108 GGSLLDIIKTYYP--DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR 182 (516)
T ss_pred CCcHHHHHHHHcc--ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecccCce
Confidence 9999999976433 4599999999999999999999999 9999999999999999999999999998776554322
Q ss_pred cce--eecCccccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 385 ERT--VMAGGTYGYLAPEFVYR--NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 385 ~~~--~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
... ....||+.|||||+++. ..|+.|+||||||++..||.+|..||....+.. -+..... +......
T Consensus 183 ~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk--vLl~tLq-----n~pp~~~-- 253 (516)
T KOG0582|consen 183 QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK--VLLLTLQ-----NDPPTLL-- 253 (516)
T ss_pred eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH--HHHHHhc-----CCCCCcc--
Confidence 211 23349999999999764 468999999999999999999999998876531 1111000 0000000
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
...........++..+..++..||+.||++|||++++++
T Consensus 254 --t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 254 --TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred --cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 001112223345668999999999999999999999986
No 20
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-44 Score=352.97 Aligned_cols=248 Identities=24% Similarity=0.323 Sum_probs=203.8
Q ss_pred hCcccCCceecccCceEEEEEEeC-CCCEEEEEEeccc----ch-hcHHHHHHHHHHHhhcC-CCcEeeeeeEEeeCCce
Q 010309 224 KNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS----SF-QRKKEFYSEIGRFARLH-HPNLVAVKGCCYDHGDR 296 (513)
Q Consensus 224 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~ 296 (513)
.+.+...+.||+|+||.|+.|... ++..||+|++.+. .. ...+.+.+|+.+++.++ ||||+++++++......
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 445566778899999999999854 6899999987664 22 23456778999999998 99999999999999999
Q ss_pred EEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC-CCeEEeccccc
Q 010309 297 YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE-FGAHLMGVGLS 375 (513)
Q Consensus 297 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~~ 375 (513)
|+||||+.+|+|.+++.+ ...+.+..+..+++|+++|++|+|+. +|+||||||+|||++.+ +++||+|||++
T Consensus 96 ~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 999999999999999964 46789999999999999999999999 99999999999999999 99999999999
Q ss_pred ccCCccccccceeecCcccccccccccccCC-CC-chhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccc
Q 010309 376 KFVPWEVMQERTVMAGGTYGYLAPEFVYRNE-LT-TKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHR 453 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 453 (513)
.... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||...+.. .+... +..+
T Consensus 169 ~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~---~l~~k----i~~~- 238 (370)
T KOG0583|consen 169 AISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP---NLYRK----IRKG- 238 (370)
T ss_pred cccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH---HHHHH----HhcC-
Confidence 9874 1122333456999999999999877 75 7899999999999999999999874322 11111 0000
Q ss_pred ccccccccccCCCCCCCcHHH-HHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 454 YLELLDPLISSLSSDIPEAGV-VQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.-..+... +.++.+|+.+||..||.+|+|+.+|++
T Consensus 239 -------------~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 239 -------------EFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred -------------CccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 00111122 678999999999999999999999993
No 21
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-45 Score=349.30 Aligned_cols=261 Identities=21% Similarity=0.303 Sum_probs=201.4
Q ss_pred eecccCceEEEEEEe-CCCCEEEEEEecccchhcH-HHHHHHHHHHhhcC-CCcEeeeeeEEeeCC-ceEEEEeeccCCC
Q 010309 232 LLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSFQRK-KEFYSEIGRFARLH-HPNLVAVKGCCYDHG-DRYIVYEFVVNGP 307 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~-~~~lv~e~~~~gs 307 (513)
.||.|.||.||+|+. ..|..||||++++.-..-. -.=.+|++.|++|+ ||||+++.+++.+.+ .+|+||||| ..+
T Consensus 17 klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~M-d~N 95 (538)
T KOG0661|consen 17 KLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFM-DCN 95 (538)
T ss_pred HhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhh-hhh
Confidence 459999999999995 4689999999987633222 22368999999998 999999999999988 899999999 559
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.++++++ ++.+++..++.|+.||++||+|+|.+ |+.||||||+|||+..+..+||+|||+|+...........
T Consensus 96 LYqLmK~R---~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeY 169 (538)
T KOG0661|consen 96 LYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEY 169 (538)
T ss_pred HHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccccCCCcchh
Confidence 99999863 57899999999999999999999999 9999999999999998889999999999988765544333
Q ss_pred eecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccc-hhHHhhh-HH-------hhccccccc
Q 010309 388 VMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQ-SIFEWAT-PL-------VQSHRYLEL 457 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~-~~~~~~~-~~-------~~~~~~~~~ 457 (513)
. .|..|+|||++.. +.|+.+.|+||+|||++|+.+-++.|.+.++.+.. .+.+... +. ....+...+
T Consensus 170 V---STRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf 246 (538)
T KOG0661|consen 170 V---STRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNF 246 (538)
T ss_pred h---hcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhcc
Confidence 2 7899999998875 67899999999999999999999999887654211 1111000 00 000000111
Q ss_pred ccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 458 LDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
.-+...+..-...-...+.++.++|.+|+..||.+||||+++++.
T Consensus 247 ~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 247 RFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred CCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 111111111111112367789999999999999999999999873
No 22
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=8.2e-44 Score=355.68 Aligned_cols=260 Identities=27% Similarity=0.369 Sum_probs=201.7
Q ss_pred ccCCceecccCceEEEEEEe------CCCCEEEEEEecccc-hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCC-ceE
Q 010309 227 SEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRSS-FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHG-DRY 297 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~-~~~ 297 (513)
+...+.||+|+||.||+|.. .+++.||||+++... ......+.+|+.++..+ +||||+++++++...+ ..+
T Consensus 9 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~ 88 (338)
T cd05102 9 LRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLM 88 (338)
T ss_pred ceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceE
Confidence 34456789999999999974 235689999997543 23346789999999999 8999999999887654 578
Q ss_pred EEEeeccCCCHHHHhccCCCC----------------------------------------------------------C
Q 010309 298 IVYEFVVNGPLDRWLHHIPRG----------------------------------------------------------G 319 (513)
Q Consensus 298 lv~e~~~~gsL~~~l~~~~~~----------------------------------------------------------~ 319 (513)
+||||+++|+|.+++...... .
T Consensus 89 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (338)
T cd05102 89 VIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWK 168 (338)
T ss_pred EEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccccc
Confidence 999999999999998642110 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeecCcccccccc
Q 010309 320 RSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAP 399 (513)
Q Consensus 320 ~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aP 399 (513)
..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...............+++.|+||
T Consensus 169 ~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP 245 (338)
T cd05102 169 SPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAP 245 (338)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCc
Confidence 3478889999999999999999999 9999999999999999999999999999865432221112222356789999
Q ss_pred cccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHH
Q 010309 400 EFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKV 478 (513)
Q Consensus 400 E~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 478 (513)
|++.+..++.++||||||+++|||++ |..||....... ... ....... ....+...++.+
T Consensus 246 E~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~--~~~----~~~~~~~-------------~~~~~~~~~~~l 306 (338)
T cd05102 246 ESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE--EFC----QRLKDGT-------------RMRAPENATPEI 306 (338)
T ss_pred HHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH--HHH----HHHhcCC-------------CCCCCCCCCHHH
Confidence 99998999999999999999999997 999997643211 000 0011000 000112345679
Q ss_pred HHHHHHhcCCCCCCCCCHHHHHHHHhcCcC
Q 010309 479 VDLVYACTQHVPSMRPRMSHVVHQLQQLAQ 508 (513)
Q Consensus 479 ~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 508 (513)
.+|+.+||+.||++|||+.+|++.|+++..
T Consensus 307 ~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 307 YRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999999998754
No 23
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-44 Score=352.94 Aligned_cols=263 Identities=23% Similarity=0.381 Sum_probs=208.5
Q ss_pred HHhhCcccCCceecccCceEEEEEEeCCCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEE
Q 010309 221 SITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYI 298 (513)
Q Consensus 221 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 298 (513)
.+.-++......||+|.||+||+|.+. ..||||++.-.. ....+.|.+|+..+++-+|.||+-+.|++..+.. .|
T Consensus 388 eIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AI 464 (678)
T KOG0193|consen 388 EIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AI 464 (678)
T ss_pred ccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-ee
Confidence 344444455667899999999999983 369999997653 3456789999999999999999999999988877 99
Q ss_pred EEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccC
Q 010309 299 VYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 378 (513)
Q Consensus 299 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~ 378 (513)
|+.+|+|.+|..+|+. .+..++..+.+.|++||++||.|||.+ +|||||||..|||+.++++|||+|||++...
T Consensus 465 iTqwCeGsSLY~hlHv---~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 465 ITQWCEGSSLYTHLHV---QETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred eehhccCchhhhhccc---hhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeee
Confidence 9999999999999985 336799999999999999999999999 9999999999999999999999999999754
Q ss_pred CccccccceeecCccccccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccc
Q 010309 379 PWEVMQERTVMAGGTYGYLAPEFVYR---NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYL 455 (513)
Q Consensus 379 ~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (513)
..-..........|...|||||++.. .+|++.+||||||+++|||+||..||....... -++... .+
T Consensus 539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq--IifmVG-----rG--- 608 (678)
T KOG0193|consen 539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ--IIFMVG-----RG--- 608 (678)
T ss_pred eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh--eEEEec-----cc---
Confidence 33222222223347889999999974 478999999999999999999999998432211 110000 00
Q ss_pred ccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcC
Q 010309 456 ELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQ 508 (513)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 508 (513)
.+.+. .......++.++.+|+..||..+|++||.+.+|+..|+.+..
T Consensus 609 -~l~pd-----~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 609 -YLMPD-----LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred -ccCcc-----chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 00011 111233566789999999999999999999999998887765
No 24
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=5.5e-43 Score=340.53 Aligned_cols=246 Identities=20% Similarity=0.344 Sum_probs=199.4
Q ss_pred ceecccCceEEEEEEeCCCCEEEEEEecccchhc---HHHHHHHHHHHhhcCCCcEeeeeeEEee----CCceEEEEeec
Q 010309 231 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYD----HGDRYIVYEFV 303 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~lv~e~~ 303 (513)
..||+|++|.||+|.. +|+.||||+++...... .+.+.+|+.+|.+++||||+++++++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 4679999999999998 78999999997653333 4677899999999999999999999877 34679999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
++|+|.+++.. ...+++.....++.|++.||.|||+.. +++||||||+|||++.++.+||+|||+++.......
T Consensus 105 ~~g~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~ 178 (283)
T PHA02988 105 TRGYLREVLDK----EKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPF 178 (283)
T ss_pred CCCcHHHHHhh----CCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhccccc
Confidence 99999999964 346889999999999999999999732 788999999999999999999999999986543221
Q ss_pred ccceeecCccccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccc
Q 010309 384 QERTVMAGGTYGYLAPEFVYR--NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPL 461 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (513)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||...+... +.. ....... .
T Consensus 179 -----~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~---~~~---~i~~~~~-----~-- 240 (283)
T PHA02988 179 -----KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE---IYD---LIINKNN-----S-- 240 (283)
T ss_pred -----cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH---HHH---HHHhcCC-----C--
Confidence 1237889999999976 678999999999999999999999998654321 111 1110000 0
Q ss_pred ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 462 ISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
. ..+...++.+.+|+.+||+.||++|||+++|++.|+.+.
T Consensus 241 -----~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 241 -----L-KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred -----C-CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 0 011234667999999999999999999999999998764
No 25
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=8e-44 Score=346.82 Aligned_cols=238 Identities=26% Similarity=0.456 Sum_probs=202.0
Q ss_pred eecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHHH
Q 010309 232 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 311 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 311 (513)
-||+|+.|.||+|++ .++.||||+++.- -..+++.|++|+||||+.+.|+|....-++||||||..|-|.+.
T Consensus 131 WlGSGaQGAVF~Grl-~netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~V 202 (904)
T KOG4721|consen 131 WLGSGAQGAVFLGRL-HNETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEV 202 (904)
T ss_pred hhccCcccceeeeec-cCceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHH
Confidence 579999999999999 6889999988533 23578899999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeecC
Q 010309 312 LHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG 391 (513)
Q Consensus 312 l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 391 (513)
|+. +..+.......+..+||.||.|||.+ .|||||||.-||||+.+..+||+|||.++..... ......+
T Consensus 203 Lka----~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STkMSFa 272 (904)
T KOG4721|consen 203 LKA----GRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STKMSFA 272 (904)
T ss_pred Hhc----cCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh---hhhhhhh
Confidence 953 57789999999999999999999999 9999999999999999999999999999876543 2334456
Q ss_pred cccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCc
Q 010309 392 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPE 471 (513)
Q Consensus 392 gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (513)
||..|||||++...+.+.|.|||||||||||||||..||.+.+...+ -| .+-...+ ....+
T Consensus 273 GTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI----Iw-----------GVGsNsL----~LpvP 333 (904)
T KOG4721|consen 273 GTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI----IW-----------GVGSNSL----HLPVP 333 (904)
T ss_pred hhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee----EE-----------eccCCcc----cccCc
Confidence 99999999999999999999999999999999999999987664310 00 0001111 22234
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 472 AGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 472 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
..+++.+.-|+++||+..|..||++.+|+.-|+-.
T Consensus 334 stcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 334 STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 45677899999999999999999999999988743
No 26
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=6.8e-43 Score=312.16 Aligned_cols=264 Identities=19% Similarity=0.247 Sum_probs=204.2
Q ss_pred CceecccCceEEEEEEe-CCCCEEEEEEecccchhc--HHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSFQR--KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|.||.||+|+. .+|+.||||+++.....+ .....+|++.|+.++|+||+.++++|...+...||+||++ .
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~-t 85 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP-T 85 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEecc-c
Confidence 34679999999999995 469999999998764332 3567899999999999999999999999999999999994 5
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|...+++ ....++..++..++.++++||+|||++ .|+||||||.|+|++++|.+||+|||+++.+........
T Consensus 86 dLe~vIkd---~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~ 159 (318)
T KOG0659|consen 86 DLEVVIKD---KNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT 159 (318)
T ss_pred cHHHHhcc---cccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence 99999974 446799999999999999999999999 999999999999999999999999999998876544333
Q ss_pred eeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccc------cccc
Q 010309 387 TVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYL------ELLD 459 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 459 (513)
.. .-|..|.|||++.+. .|+...|+||.|||+.||+-|.+-|.+.++.+....+-.+........+. +...
T Consensus 160 ~~--V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~ 237 (318)
T KOG0659|consen 160 HQ--VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVK 237 (318)
T ss_pred cc--eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHH
Confidence 22 278899999999874 68999999999999999999998888776543222211111000111111 0000
Q ss_pred cc-ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 460 PL-ISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 460 ~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
-. .........-...+.++.+|+.+|+..||.+|+|+.|+++.
T Consensus 238 ~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 238 IQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 00 00000000112345667999999999999999999999863
No 27
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-43 Score=319.19 Aligned_cols=230 Identities=24% Similarity=0.334 Sum_probs=197.9
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccchhc---HHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
+.||.|+||.|.+++.+ +|..+|+|++++..... .+...+|..+|+.+.||+++++++.+.+.+..||||||++||
T Consensus 50 ~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GG 129 (355)
T KOG0616|consen 50 KTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGG 129 (355)
T ss_pred eeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCc
Confidence 46799999999999965 58899999998764433 455678999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
.|..+|++ .+++++..++.++.||+.||+|||+. +|++|||||+|||||.+|.+||+|||+|+.... .
T Consensus 130 ElFS~Lrk----~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~-----r 197 (355)
T KOG0616|consen 130 ELFSYLRK----SGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG-----R 197 (355)
T ss_pred cHHHHHHh----cCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC-----c
Confidence 99999964 46799999999999999999999999 999999999999999999999999999997653 2
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
+...+|||.|+|||++...+++.++|-|||||++|||+.|.+||....+. .+.+ .++.+
T Consensus 198 T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~---~iY~----------------KI~~~-- 256 (355)
T KOG0616|consen 198 TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI---QIYE----------------KILEG-- 256 (355)
T ss_pred EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH---HHHH----------------HHHhC--
Confidence 45567999999999999999999999999999999999999999876542 1111 11111
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCC
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMR 493 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~R 493 (513)
.-..+...+.++.+|+.++|+.|-.+|
T Consensus 257 ~v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 257 KVKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred cccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 112344567789999999999999999
No 28
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.1e-43 Score=344.06 Aligned_cols=241 Identities=22% Similarity=0.343 Sum_probs=204.1
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|+||.||+|+.+ +.+.||+|.+.+.. .++.+.+.+|+++++.++||||+.++++|+...+.++|+||+.|
T Consensus 7 ~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g- 85 (808)
T KOG0597|consen 7 YEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG- 85 (808)
T ss_pred HHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-
Confidence 346799999999999965 58899999998753 33457799999999999999999999999999999999999966
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|..+|.. ...++++.+..|+.|++.||.|||+. +|+|||+||.|||++.++++|++|||+++.+..... .
T Consensus 86 ~L~~il~~----d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~--v 156 (808)
T KOG0597|consen 86 DLFTILEQ----DGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTS--V 156 (808)
T ss_pred hHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccCce--e
Confidence 99999964 46799999999999999999999999 999999999999999999999999999998765332 2
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....|||-|||||++.+.+|+..+|+||+|||+||+++|++||....- ...... ++..
T Consensus 157 ltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si------~~Lv~~-------------I~~d-- 215 (808)
T KOG0597|consen 157 LTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI------TQLVKS-------------ILKD-- 215 (808)
T ss_pred eeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH------HHHHHH-------------HhcC--
Confidence 2334499999999999999999999999999999999999999975321 111111 1111
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+-.++...+..+..|+...|.+||..|.|..+++.
T Consensus 216 ~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 216 PVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred CCCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 22234467788999999999999999999998874
No 29
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-43 Score=348.92 Aligned_cols=253 Identities=29% Similarity=0.404 Sum_probs=206.3
Q ss_pred ceecccCceEEEEEEeCC--C---CEEEEEEeccc---chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 231 RLLGDSKTGGTYSGILPD--G---SRVAVKRLKRS---SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~--~---~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
+.||+|+||.||+|.+.. + ..||||..+.. ......++.+|+++|++++|||||++||++....+++||||+
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl 242 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMEL 242 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEe
Confidence 678999999999999643 2 23899999853 345568899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~ 382 (513)
|.||+|.++|.... ..++..+...++.+.|.||+|||++ +++||||.++|+|++.++.+||+|||+++......
T Consensus 243 ~~gGsL~~~L~k~~---~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~ 316 (474)
T KOG0194|consen 243 CNGGSLDDYLKKNK---KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYV 316 (474)
T ss_pred cCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCCccee
Confidence 99999999997532 3699999999999999999999999 99999999999999999999999999998764222
Q ss_pred cccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhccccccccccc
Q 010309 383 MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPL 461 (513)
Q Consensus 383 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (513)
.... ...-+..|+|||.+..+.++.++|||||||++||+++ |..||.+...... ..++ ...+
T Consensus 317 ~~~~--~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v---~~kI---~~~~--------- 379 (474)
T KOG0194|consen 317 MKKF--LKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEV---KAKI---VKNG--------- 379 (474)
T ss_pred eccc--cccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHH---HHHH---HhcC---------
Confidence 1111 1125689999999999999999999999999999999 8889987654311 1111 0100
Q ss_pred ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCCC
Q 010309 462 ISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQPP 510 (513)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 510 (513)
..-..+...+..+..++.+|+..||++||+|.++.+.|+.+....
T Consensus 380 ----~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 380 ----YRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred ----ccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence 011122245667889999999999999999999999998776653
No 30
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=8.8e-42 Score=335.89 Aligned_cols=262 Identities=23% Similarity=0.328 Sum_probs=200.1
Q ss_pred cCCceecccCceEEEEEEeCC-----------------CCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeE
Q 010309 228 EGNRLLGDSKTGGTYSGILPD-----------------GSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGC 289 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~ 289 (513)
...+.||+|+||.||++.+.+ +..||+|++.... .....++.+|+.++.+++||||++++++
T Consensus 8 ~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 87 (304)
T cd05096 8 LFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGV 87 (304)
T ss_pred eeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEE
Confidence 345568999999999998532 3479999997653 2345679999999999999999999999
Q ss_pred EeeCCceEEEEeeccCCCHHHHhccCCC---------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCC
Q 010309 290 CYDHGDRYIVYEFVVNGPLDRWLHHIPR---------------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDI 354 (513)
Q Consensus 290 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Di 354 (513)
+.+.+..++||||+++++|.+++..... ....+++..+..++.||+.||.|||+. +|+||||
T Consensus 88 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH~dl 164 (304)
T cd05096 88 CVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVHRDL 164 (304)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---CccccCc
Confidence 9999999999999999999999864221 113478889999999999999999999 9999999
Q ss_pred CCCceEecCCCCeEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCC
Q 010309 355 RASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS--GRRPAQA 432 (513)
Q Consensus 355 kp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt--g~~p~~~ 432 (513)
||+|||++.++.+||+|||++................++..|+|||++.+..++.++||||||+++|||++ +..||..
T Consensus 165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 244 (304)
T cd05096 165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGE 244 (304)
T ss_pred chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence 99999999999999999999986543322111122225788999999988899999999999999999987 5677765
Q ss_pred CCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 433 VDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
.+.. ............... .. . .. .+..++..+.+|+.+||+.||++|||+++|.+.|++
T Consensus 245 ~~~~---~~~~~~~~~~~~~~~-~~----~----~~-~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 245 LTDE---QVIENAGEFFRDQGR-QV----Y----LF-RPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCHH---HHHHHHHHHhhhccc-cc----c----cc-CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 4432 111111111110000 00 0 00 011244679999999999999999999999998863
No 31
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-43 Score=336.12 Aligned_cols=242 Identities=23% Similarity=0.381 Sum_probs=204.8
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.+||+|.||.||+|... .++.||+|++.-+.. ...+++++|+.+|.+++++||.++|+.+..+..++++|||+.||++
T Consensus 19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv 98 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSV 98 (467)
T ss_pred hhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcch
Confidence 46799999999999964 588999999986643 3457899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+.|+. +..+.+..+.-|+++++.||.|||.+ +.+|||||+.|||+..+|.+||+|||.+-.+....... .
T Consensus 99 ~~lL~~----~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr--~ 169 (467)
T KOG0201|consen 99 LDLLKS----GNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR--K 169 (467)
T ss_pred hhhhcc----CCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhhcc--c
Confidence 999853 34458888888999999999999999 99999999999999999999999999998876554433 2
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...||+.|||||++....|+.|+||||||++++||++|.+|+....+.... -++... .++.
T Consensus 170 tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl----------------flIpk~---~PP~ 230 (467)
T KOG0201|consen 170 TFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL----------------FLIPKS---APPR 230 (467)
T ss_pred cccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE----------------EeccCC---CCCc
Confidence 344999999999999889999999999999999999999999877653211 111111 1111
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. ...+++.+.+|+..||+.||+.||+|.++++
T Consensus 231 L-~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 231 L-DGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred c-ccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 1 2256778999999999999999999999986
No 32
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.8e-43 Score=346.59 Aligned_cols=243 Identities=21% Similarity=0.299 Sum_probs=206.1
Q ss_pred cCCceecccCceEEEEEEe-CCCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 228 EGNRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
..++-||.|+.|.|-+|++ .+|+.+|||++.+.. ......+.+|+-+|+.+.||||+++|+++++..++|+|+||+
T Consensus 15 kLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv 94 (786)
T KOG0588|consen 15 KLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYV 94 (786)
T ss_pred eccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEec
Confidence 4566789999999999996 479999999998762 223466889999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
++|-|.+++.. .+++++.++.++++||+.|+.|+|.. +|+||||||+|+|||..+++||+|||+|..-.....
T Consensus 95 ~gGELFdylv~----kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl 167 (786)
T KOG0588|consen 95 PGGELFDYLVR----KGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL 167 (786)
T ss_pred CCchhHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccCCcc
Confidence 99999999954 47799999999999999999999999 999999999999999999999999999987554433
Q ss_pred ccceeecCcccccccccccccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 384 QERTVMAGGTYGYLAPEFVYRNELT-TKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
. ...||.+.|.|||++++.+|. .++||||.|||||.||||+.||++.+ ...+...+. .+
T Consensus 168 L---eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN---ir~LLlKV~----~G---------- 227 (786)
T KOG0588|consen 168 L---ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN---IRVLLLKVQ----RG---------- 227 (786)
T ss_pred c---cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc---HHHHHHHHH----cC----------
Confidence 2 234699999999999999985 68999999999999999999998543 222222111 11
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....+..++.++.+|+.+||..||++|.|++||++
T Consensus 228 ----~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 228 ----VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred ----cccCCCcCCHHHHHHHHHHhccCccccccHHHHhh
Confidence 11223567778999999999999999999999987
No 33
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.6e-42 Score=335.52 Aligned_cols=245 Identities=21% Similarity=0.275 Sum_probs=200.5
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchhc---HHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
-+.||+|+||.||+++-+ +|..+|+|++++..... .+.++.|-.+|....+|.||+|+..|.+.+.+||||||++|
T Consensus 146 Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPG 225 (550)
T KOG0605|consen 146 LKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPG 225 (550)
T ss_pred heeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCC
Confidence 456799999999999954 59999999999875433 45678899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccc---
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV--- 382 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--- 382 (513)
|++..+|.. ...|++..++.++.+++.|+.-||.. |+|||||||+|+|||..|++||+|||++..+....
T Consensus 226 GD~mTLL~~----~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~ 298 (550)
T KOG0605|consen 226 GDMMTLLMR----KDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIE 298 (550)
T ss_pred ccHHHHHHh----cCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhhhhhhh
Confidence 999999964 46799999999999999999999999 99999999999999999999999999995432100
Q ss_pred ----------------cccc--------------------------eeecCcccccccccccccCCCCchhhHHHHHHHH
Q 010309 383 ----------------MQER--------------------------TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLL 420 (513)
Q Consensus 383 ----------------~~~~--------------------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil 420 (513)
.... .....|||.|+|||++.+..|+..+|.||||||+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Im 378 (550)
T KOG0605|consen 299 SYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIM 378 (550)
T ss_pred hhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHH
Confidence 0000 0011289999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCcc-ccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCC---H
Q 010309 421 LEIVSGRRPAQAVDSV-CWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPR---M 496 (513)
Q Consensus 421 ~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~ 496 (513)
||||.|.+||...++. .+.++..|...+ ..+.....++++.+||.+||. ||++|.. +
T Consensus 379 yEmLvGyPPF~s~tp~~T~rkI~nwr~~l------------------~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~ 439 (550)
T KOG0605|consen 379 YEMLVGYPPFCSETPQETYRKIVNWRETL------------------KFPEEVDLSDEAKDLITRLLC-DPENRLGSKGA 439 (550)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhhhc------------------cCCCcCcccHHHHHHHHHHhc-CHHHhcCcccH
Confidence 9999999999887664 233444443321 111222345789999999999 9999975 5
Q ss_pred HHHH
Q 010309 497 SHVV 500 (513)
Q Consensus 497 ~evl 500 (513)
+||.
T Consensus 440 ~EIK 443 (550)
T KOG0605|consen 440 EEIK 443 (550)
T ss_pred HHHh
Confidence 5554
No 34
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.5e-41 Score=377.74 Aligned_cols=264 Identities=27% Similarity=0.483 Sum_probs=207.1
Q ss_pred hCcccCCceecccCceEEEEEEe-CCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 224 KNFSEGNRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 224 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
..+.+ ..+||+|+||.||+|.. .++..||||++...... ...|++++++++||||+++++++.+.+..++||||
T Consensus 690 ~~~~~-~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey 764 (968)
T PLN00113 690 SSLKE-ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY 764 (968)
T ss_pred hhCCc-ccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence 34444 45779999999999997 47899999998754321 23468889999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~ 382 (513)
+++|+|.++++ .+++..+..++.|++.||+|||..+.++|+||||||+||+++.++.+++. |+.........
T Consensus 765 ~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~ 836 (968)
T PLN00113 765 IEGKNLSEVLR-------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDT 836 (968)
T ss_pred CCCCcHHHHHh-------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCC
Confidence 99999999994 38899999999999999999996655699999999999999999888775 66554332111
Q ss_pred cccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 383 MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 383 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
...+|+.|+|||++.+..++.++|||||||++|||+||+.||..... ......+|.............+++.+
T Consensus 837 ------~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (968)
T PLN00113 837 ------KCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLDMWIDPSI 909 (968)
T ss_pred ------CccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchhheeCccc
Confidence 11378999999999999999999999999999999999999854322 22344555544433333344455544
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCC
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQP 509 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 509 (513)
... .........++.+++.+||+.||++||||+||++.|+++...
T Consensus 910 ~~~--~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 910 RGD--VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred cCC--CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 321 122345566789999999999999999999999999988653
No 35
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=9.5e-42 Score=332.43 Aligned_cols=247 Identities=19% Similarity=0.273 Sum_probs=198.0
Q ss_pred CceecccCceEEEEEEe-CCCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||.||++.. .+|+.||||.+..... .....+.+|+.++.+++|+||+++++++.+.+..++||||+++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05631 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNG 84 (285)
T ss_pred EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCC
Confidence 45789999999999986 4699999999875432 2234678899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+|||++.........
T Consensus 85 g~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~- 158 (285)
T cd05631 85 GDLKFHIYNM--GNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETV- 158 (285)
T ss_pred CcHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCee-
Confidence 9999887542 234689999999999999999999999 9999999999999999999999999999865432211
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
....||..|+|||++.+..++.++|||||||++|||++|+.||........... ...... ..
T Consensus 159 --~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~---~~~~~~--------~~----- 220 (285)
T cd05631 159 --RGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE---VDRRVK--------ED----- 220 (285)
T ss_pred --cCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH---HHHHhh--------cc-----
Confidence 122389999999999999999999999999999999999999986543211110 000000 00
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHH
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRPR-----MSHVVH 501 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 501 (513)
........+.++.+|+.+||+.||.+||+ ++++++
T Consensus 221 -~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 221 -QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred -cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 01112234567999999999999999997 788876
No 36
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=4e-42 Score=341.08 Aligned_cols=240 Identities=23% Similarity=0.263 Sum_probs=196.0
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
+||+|+||.||++... +|+.||||+++... ......+.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 5899999999999864 68999999997642 2233567889999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........ .
T Consensus 82 L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~--~ 152 (323)
T cd05571 82 LFFHLSR----ERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT--M 152 (323)
T ss_pred HHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCc--c
Confidence 9998864 35689999999999999999999999 9999999999999999999999999998754222111 1
Q ss_pred eecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCC
Q 010309 388 VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSS 467 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (513)
....||+.|+|||++.+..++.++|||||||++|||++|..||...+... .... .....
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~---~~~~----~~~~~-------------- 211 (323)
T cd05571 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFEL----ILMEE-------------- 211 (323)
T ss_pred cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH---HHHH----HHcCC--------------
Confidence 12338999999999999999999999999999999999999997644321 1110 00000
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Q 010309 468 DIPEAGVVQKVVDLVYACTQHVPSMRP-----RMSHVVH 501 (513)
Q Consensus 468 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 501 (513)
...+...++++.+|+.+||+.||++|| ++.++++
T Consensus 212 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 212 IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 001123456799999999999999999 7888875
No 37
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=6.6e-42 Score=346.07 Aligned_cols=257 Identities=25% Similarity=0.372 Sum_probs=200.6
Q ss_pred cCCceecccCceEEEEEEe------CCCCEEEEEEecccc-hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEE
Q 010309 228 EGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRSS-FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIV 299 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv 299 (513)
...+.||+|+||.||+|.. .++..||||+++... ....+.+.+|+.++..+ +||||+++++++.+.+..++|
T Consensus 38 ~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv 117 (375)
T cd05104 38 SFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVI 117 (375)
T ss_pred ehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceee
Confidence 3356789999999999973 246689999997543 23456788999999999 899999999999999999999
Q ss_pred EeeccCCCHHHHhccCCC--------------------------------------------------------------
Q 010309 300 YEFVVNGPLDRWLHHIPR-------------------------------------------------------------- 317 (513)
Q Consensus 300 ~e~~~~gsL~~~l~~~~~-------------------------------------------------------------- 317 (513)
|||+++|+|.+++.....
T Consensus 118 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (375)
T cd05104 118 TEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQ 197 (375)
T ss_pred ehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceeccc
Confidence 999999999999864211
Q ss_pred ---------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 318 ---------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 318 ---------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++.............
T Consensus 198 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 274 (375)
T cd05104 198 DVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKG 274 (375)
T ss_pred ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccccccC
Confidence 112578889999999999999999999 99999999999999999999999999998664332211111
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSS 467 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (513)
...++..|+|||++.+..++.++||||||+++|||++ |..||...... ..... ...... ..
T Consensus 275 ~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~--~~~~~----~~~~~~-----~~------- 336 (375)
T cd05104 275 NARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD--SKFYK----MIKEGY-----RM------- 336 (375)
T ss_pred CCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch--HHHHH----HHHhCc-----cC-------
Confidence 1225668999999999999999999999999999998 88898754321 01111 111110 00
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 468 DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 468 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
. .+...+.++.+|+.+||+.||++|||+.+|++.|++.
T Consensus 337 ~-~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 337 L-SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred C-CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 0 0112245799999999999999999999999999864
No 38
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-42 Score=330.52 Aligned_cols=249 Identities=21% Similarity=0.320 Sum_probs=192.6
Q ss_pred cCCceecccCceEEEEEEeC-CCCEEEEEEecccch--------------hcHHHHHHHHHHHhhcCCCcEeeeeeEEee
Q 010309 228 EGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF--------------QRKKEFYSEIGRFARLHHPNLVAVKGCCYD 292 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 292 (513)
+..+-||+|.||.|-+|+.. +++.||||++.+... ...+...+|+.+|++++|||||+|+++..+
T Consensus 100 ~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDD 179 (576)
T KOG0585|consen 100 ELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDD 179 (576)
T ss_pred ehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecC
Confidence 33445699999999999964 699999999975421 123578999999999999999999999876
Q ss_pred C--CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEe
Q 010309 293 H--GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM 370 (513)
Q Consensus 293 ~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 370 (513)
. +.+|||+|||..|.+...= .....+++.++++++++++.||.|||.+ +||||||||+|+||+++|++||+
T Consensus 180 P~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~VKIs 252 (576)
T KOG0585|consen 180 PESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGTVKIS 252 (576)
T ss_pred cccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCcEEee
Confidence 5 6789999999988774422 2223399999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCccc---cccceeecCcccccccccccccCC----CCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHH
Q 010309 371 GVGLSKFVPWEV---MQERTVMAGGTYGYLAPEFVYRNE----LTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFE 443 (513)
Q Consensus 371 Dfg~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~ 443 (513)
|||.+....... .........|||.|+|||...++. .+.+.||||+||+||-|+.|+.||.+.... .+++
T Consensus 253 DFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~---~l~~ 329 (576)
T KOG0585|consen 253 DFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL---ELFD 329 (576)
T ss_pred ccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH---HHHH
Confidence 999998763221 111111234999999999998743 256889999999999999999999865431 1111
Q ss_pred hhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 444 WATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
.++...+ ......++.+.+.+||++||.+||+.|.+..+|...
T Consensus 330 ------------KIvn~pL----~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 330 ------------KIVNDPL----EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred ------------HHhcCcc----cCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence 1111111 111122466789999999999999999999988653
No 39
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-42 Score=349.21 Aligned_cols=256 Identities=24% Similarity=0.378 Sum_probs=216.1
Q ss_pred cCCceecccCceEEEEEEe-CCC----CEEEEEEeccc-chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEe
Q 010309 228 EGNRLLGDSKTGGTYSGIL-PDG----SRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYE 301 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~-~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 301 (513)
...++||+|+||+||+|.+ ++| -+||||++... ..+...++++|+-+|.+|+|||+++++++|.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 3456889999999999995 444 47999998765 4455688999999999999999999999998776 789999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
|++.|+|.++++. .+..+..+..+.|..|||+||.|||.+ .+|||||.++|||+.+...+||.|||+++.+..+
T Consensus 778 ~mP~G~LlDyvr~---hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 778 LMPLGCLLDYVRE---HRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred hcccchHHHHHHH---hhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 9999999999985 346688999999999999999999999 9999999999999999999999999999998876
Q ss_pred ccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 382 VMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 382 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
..........-.+.|||-|.+....++.++|||||||++||++| |..|+++....++.++++....
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR------------- 918 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER------------- 918 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc-------------
Confidence 65554444445788999999999999999999999999999999 9999998776544444332211
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCCC
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQPP 510 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 510 (513)
+ ..+.-++.++..++.+||..|+..||+++++...+.+++..|
T Consensus 919 -L------sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 919 -L------SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred -C------CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 1 112346667999999999999999999999999998887655
No 40
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=326.39 Aligned_cols=262 Identities=25% Similarity=0.378 Sum_probs=199.5
Q ss_pred ceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhh--cCCCcEeeeeeEEeeCC----ceEEEEeecc
Q 010309 231 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFAR--LHHPNLVAVKGCCYDHG----DRYIVYEFVV 304 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~~----~~~lv~e~~~ 304 (513)
.++|+|.||.||+|.+ +++.||||++... ..+.|++|-.|.+. ++|+||+++++.-.... .++||+||.+
T Consensus 216 eli~~Grfg~V~KaqL-~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~ 291 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQL-DNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHP 291 (534)
T ss_pred HHhhcCccceeehhhc-cCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeecc
Confidence 3689999999999999 6699999999643 56678888777665 48999999999876555 7899999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC------CCCCceEcCCCCCceEecCCCCeEEecccccccC
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDK------VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 378 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~ 378 (513)
.|+|.++|.. ..++|....+|+..+++||+|||+. .+|+|+|||||.+||||.+|+++.|+|||+|..+
T Consensus 292 kGsL~dyL~~-----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~ 366 (534)
T KOG3653|consen 292 KGSLCDYLKA-----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRL 366 (534)
T ss_pred CCcHHHHHHh-----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEe
Confidence 9999999975 5699999999999999999999965 3678999999999999999999999999999988
Q ss_pred CccccccceeecCcccccccccccccCC-C-----CchhhHHHHHHHHHHHHcCCCCCCCCCccccchh----------H
Q 010309 379 PWEVMQERTVMAGGTYGYLAPEFVYRNE-L-----TTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSI----------F 442 (513)
Q Consensus 379 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~-----~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~----------~ 442 (513)
.............||.+|||||++.+.- + -.+.||||+|.|||||++...-+......+.+-- +
T Consensus 367 ~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~ 446 (534)
T KOG3653|consen 367 EPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTL 446 (534)
T ss_pred cCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCH
Confidence 7665444444455999999999997631 1 2468999999999999996654432111111111 1
Q ss_pred HhhhHHhhccc-ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCC
Q 010309 443 EWATPLVQSHR-YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQP 509 (513)
Q Consensus 443 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 509 (513)
+..+.++...+ ...+.+... .......+.+.+..||+.||+.|.|+.=+.+++.++...
T Consensus 447 e~mq~~VV~kK~RP~~p~~W~--------~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 447 EEMQELVVRKKQRPKIPDAWR--------KHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred HHHHHHHHhhccCCCChhhhh--------cCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence 11111111111 111111111 123456789999999999999999999999888776554
No 41
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.7e-41 Score=337.82 Aligned_cols=262 Identities=23% Similarity=0.379 Sum_probs=201.5
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
..+.||+|+||.||++... ++..||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 88 (331)
T cd06649 9 RISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 88 (331)
T ss_pred EEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCC
Confidence 3456799999999999975 58899999997642 233467899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. ...+++..+..++.|++.||.|||+.. +|+||||||+|||++.++.+||+|||++........
T Consensus 89 ~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--- 159 (331)
T cd06649 89 SLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--- 159 (331)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccccc---
Confidence 99999964 345899999999999999999999852 699999999999999999999999999876543221
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhc-c-c-----------
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQS-H-R----------- 453 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~-~----------- 453 (513)
....|++.|+|||++.+..++.++|||||||++|||++|+.||...+.......... +.... . .
T Consensus 160 -~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 236 (331)
T cd06649 160 -NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGR--PVVDGEEGEPHSISPRPRPP 236 (331)
T ss_pred -ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcc--cccccccCCccccCcccccc
Confidence 122389999999999988999999999999999999999999976543221111100 00000 0 0
Q ss_pred ----------------ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 454 ----------------YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 454 ----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
..+..+..........+....++++.+||.+||+.||++|||+++|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000011111111222356789999999999999999999999873
No 42
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.6e-41 Score=327.38 Aligned_cols=252 Identities=24% Similarity=0.372 Sum_probs=201.3
Q ss_pred cCCceecccCceEEEEEEeC----CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 228 EGNRLLGDSKTGGTYSGILP----DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
...++||+|+||.||+|.+. .+..||+|.++... ......+.+|+.++.+++||||+++++++...+..++||||
T Consensus 8 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 87 (266)
T cd05064 8 KIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEY 87 (266)
T ss_pred EEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEe
Confidence 34567899999999999853 36689999998653 23346789999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~ 382 (513)
+++|+|.+++... ...+++..++.++.|++.||+|||+. +++||||||+|||++.++.++++|||.+.......
T Consensus 88 ~~~~~L~~~l~~~---~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 88 MSNGALDSFLRKH---EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred CCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 9999999998642 24689999999999999999999999 99999999999999999999999999876543222
Q ss_pred cccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhccccccccccc
Q 010309 383 MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPL 461 (513)
Q Consensus 383 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (513)
.. ......++..|+|||.+.+..++.++||||||+++||+++ |..||....... ... . .....
T Consensus 162 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~~~---~-~~~~~-------- 225 (266)
T cd05064 162 IY-TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---VIK---A-VEDGF-------- 225 (266)
T ss_pred hh-cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHH---H-HHCCC--------
Confidence 11 1111225678999999999999999999999999999875 999997654321 111 0 11000
Q ss_pred ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 462 ISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
....+..++..+.+++.+||+.+|.+||++++|++.|+++
T Consensus 226 -----~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 226 -----RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 0011223456799999999999999999999999999765
No 43
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.1e-41 Score=344.20 Aligned_cols=258 Identities=26% Similarity=0.393 Sum_probs=200.9
Q ss_pred cCCceecccCceEEEEEEeC------CCCEEEEEEecccc-hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEE
Q 010309 228 EGNRLLGDSKTGGTYSGILP------DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIV 299 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv 299 (513)
+..+.||+|+||.||+|... ++..||||.++... ......+.+|+.+++.+ +||||+++++.+...+..++|
T Consensus 41 ~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv 120 (374)
T cd05106 41 QFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVI 120 (374)
T ss_pred eehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEe
Confidence 34567899999999998842 34589999997643 23346788999999999 899999999999999999999
Q ss_pred EeeccCCCHHHHhccCCC--------------------------------------------------------------
Q 010309 300 YEFVVNGPLDRWLHHIPR-------------------------------------------------------------- 317 (513)
Q Consensus 300 ~e~~~~gsL~~~l~~~~~-------------------------------------------------------------- 317 (513)
|||+++|+|.+++.....
T Consensus 121 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (374)
T cd05106 121 TEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDE 200 (374)
T ss_pred HhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccch
Confidence 999999999999854210
Q ss_pred ----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeecCcc
Q 010309 318 ----GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT 393 (513)
Q Consensus 318 ----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt 393 (513)
....+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++................++
T Consensus 201 ~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~ 277 (374)
T cd05106 201 EDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP 277 (374)
T ss_pred hccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCc
Confidence 113478889999999999999999999 9999999999999999999999999999765433221111112256
Q ss_pred cccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcH
Q 010309 394 YGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEA 472 (513)
Q Consensus 394 ~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (513)
..|+|||++.+..++.++||||||+++|||++ |+.||....... .... ..... ... ..+.
T Consensus 278 ~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--~~~~----~~~~~-----~~~--------~~~~ 338 (374)
T cd05106 278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--KFYK----MVKRG-----YQM--------SRPD 338 (374)
T ss_pred cceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH--HHHH----HHHcc-----cCc--------cCCC
Confidence 68999999988899999999999999999997 999997643211 1100 00000 000 0011
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 473 GVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 473 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
..++++.+++.+||+.||++|||+.+|++.|+++.
T Consensus 339 ~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 339 FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 13467999999999999999999999999998764
No 44
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8e-42 Score=337.30 Aligned_cols=239 Identities=22% Similarity=0.263 Sum_probs=193.4
Q ss_pred ecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 233 LGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 233 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
||+|+||.||++... +++.||+|+++... ......+.+|+.++.+++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999975 58899999997542 23345678899999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++........ ..
T Consensus 81 ~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--~~ 151 (312)
T cd05585 81 FHHLQR----EGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDK--TN 151 (312)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCc--cc
Confidence 999864 34689999999999999999999999 9999999999999999999999999999864322211 12
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...+... . ...... . ..
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~---~---~~~~~~---------~------~~ 210 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE---M---YRKILQ---------E------PL 210 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH---H---HHHHHc---------C------CC
Confidence 2348999999999999999999999999999999999999997643211 1 111100 0 00
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCC---HHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPR---MSHVVH 501 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 501 (513)
..+...++++.+++.+||+.||++||+ +.+++.
T Consensus 211 ~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 211 RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 111234567999999999999999986 455543
No 45
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.6e-41 Score=351.91 Aligned_cols=252 Identities=20% Similarity=0.230 Sum_probs=203.7
Q ss_pred ccCCceecccCceEEEEEEeC-C-CCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 227 SEGNRLLGDSKTGGTYSGILP-D-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
+...++||+|++|.||+|... + +..||+|.+..........+.+|+.+|+.++||||+++++++...+..||||||++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~ 148 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS 148 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence 445667899999999999854 3 67899998766555555678889999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+|+|.+++.........+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++.........
T Consensus 149 gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 149 GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 9999998865434445789999999999999999999999 9999999999999999999999999999876543222
Q ss_pred cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 385 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...+... + ...... .. .
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~---~---~~~~~~-~~--------~-- 288 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE---I---MQQVLY-GK--------Y-- 288 (478)
T ss_pred ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH---H---HHHHHh-CC--------C--
Confidence 22223348999999999999999999999999999999999999997643211 1 111000 00 0
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
...+...+.++.++|.+||+.||++||++++++.
T Consensus 289 ---~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 289 ---DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ---CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 0111234567999999999999999999999874
No 46
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.4e-42 Score=321.55 Aligned_cols=241 Identities=22% Similarity=0.345 Sum_probs=203.4
Q ss_pred CceecccCceEEEEEEe-CCCCEEEEEEecccchhcHH---HHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSFQRKK---EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|.||.|-+|.. ..|+.||||.+++....+.+ .+.+|++||..|+||||+.++.+|++.+...|||||..+
T Consensus 58 ~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~ 137 (668)
T KOG0611|consen 58 TETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASG 137 (668)
T ss_pred HHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCC
Confidence 34579999999999985 67999999999887555544 568999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|.|.+|+.. .+.+++.+++.+++||.+|+.|+|.+ +++|||||.+|||+|.++++||+|||++..+.....
T Consensus 138 GeLYDYiSe----r~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kf-- 208 (668)
T KOG0611|consen 138 GELYDYISE----RGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKF-- 208 (668)
T ss_pred ccHHHHHHH----hccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhccccH--
Confidence 999999965 46799999999999999999999999 999999999999999999999999999988765443
Q ss_pred ceeecCcccccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNEL-TTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
....+|++-|.+||++.+.+| .+..|-|||||+||.|+.|..||++.+.. .++ ..+..+.+.+
T Consensus 209 -LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk---~lv----rQIs~GaYrE-------- 272 (668)
T KOG0611|consen 209 -LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK---RLV----RQISRGAYRE-------- 272 (668)
T ss_pred -HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH---HHH----HHhhcccccC--------
Confidence 234569999999999999988 47899999999999999999999987642 111 1112222111
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
...+....-||++||..||++|.|+++|..-
T Consensus 273 -------P~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 273 -------PETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred -------CCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 1122347789999999999999999999763
No 47
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=5.7e-42 Score=329.18 Aligned_cols=248 Identities=30% Similarity=0.505 Sum_probs=193.4
Q ss_pred ceecccCceEEEEEEeC-----CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 231 RLLGDSKTGGTYSGILP-----DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
+.||.|.||.||+|.+. .+..|+||.++... ....+.+.+|++.+++++||||++++|++...+..++|+||++
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~ 84 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCP 84 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--T
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccccc
Confidence 46899999999999976 26789999996543 3346889999999999999999999999998888999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+|+|.++|... ....+++..+..|+.||+.||.|||+. +++|+||+++|||++.++.+||+|||++.........
T Consensus 85 ~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 85 GGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp TEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred ccccccccccc--ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence 99999999863 245699999999999999999999999 9999999999999999999999999999876322211
Q ss_pred cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 385 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
...........|+|||.+....++.++||||||+++|||++ |+.||...+... +. ... .....
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~---~~---~~~-~~~~~--------- 223 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE---II---EKL-KQGQR--------- 223 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH---HH---HHH-HTTEE---------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccc---cc---ccc-ccccc---------
Confidence 11111226778999999998889999999999999999999 789987654321 11 111 11100
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQL 503 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 503 (513)
...+..++..+.++|.+||+.||++|||+++|++.|
T Consensus 224 ----~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 ----LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 001122455699999999999999999999999987
No 48
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-42 Score=303.77 Aligned_cols=244 Identities=26% Similarity=0.337 Sum_probs=205.8
Q ss_pred cCCceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 228 EGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
+..+.||+|.||.||.|+.+ ++-.||+|++.+... ....++.+|+++-+.|+||||+++|++|.+....||++||.
T Consensus 25 eigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya 104 (281)
T KOG0580|consen 25 EIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYA 104 (281)
T ss_pred cccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEec
Confidence 45678899999999999964 578999999977632 34578999999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
.+|+|...|.. .....+++.....++.|+|.||.|+|.. +|+||||||+|+|++.++.+||+|||-+...+.
T Consensus 105 ~~gel~k~L~~--~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~--- 176 (281)
T KOG0580|consen 105 PRGELYKDLQE--GRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 176 (281)
T ss_pred CCchHHHHHHh--cccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecCC---
Confidence 99999999975 3456799999999999999999999999 999999999999999999999999999986542
Q ss_pred ccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 384 QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
......+||..|.|||...+..++...|+|++|++.||++.|.+||......+ ...... ..++
T Consensus 177 -~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e---tYkrI~-------k~~~------ 239 (281)
T KOG0580|consen 177 -NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE---TYKRIR-------KVDL------ 239 (281)
T ss_pred -CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH---HHHHHH-------Hccc------
Confidence 22334569999999999999999999999999999999999999998654221 111100 0111
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
..+..++..+.++|.+|+..+|.+|.+..|+++
T Consensus 240 -----~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 240 -----KFPSTISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred -----cCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence 112446678999999999999999999999986
No 49
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.8e-41 Score=336.37 Aligned_cols=241 Identities=23% Similarity=0.276 Sum_probs=195.5
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
++||+|+||.||++... +|..||+|+++... ......+.+|+.+++.++||||+++++.+...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 36899999999999964 68999999997642 223456778999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|..++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++.........
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-- 151 (323)
T cd05595 81 ELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 151 (323)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCc--
Confidence 99988854 34689999999999999999999999 9999999999999999999999999998753222111
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+... ... .... ..
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~---~~~---~~~~-~~------------- 211 (323)
T cd05595 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER---LFE---LILM-EE------------- 211 (323)
T ss_pred cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH---HHH---HHhc-CC-------------
Confidence 112348999999999998999999999999999999999999997654321 100 0000 00
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRP-----RMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 501 (513)
...+...++++.+++.+||+.||.+|| ++.++++
T Consensus 212 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 212 -IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred -CCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 001123456799999999999999998 7888775
No 50
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.3e-41 Score=332.46 Aligned_cols=239 Identities=19% Similarity=0.236 Sum_probs=196.4
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||.||++... +++.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 85 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPG 85 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCC
Confidence 456799999999999975 589999999975422 2345688999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.......
T Consensus 86 ~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~--- 155 (291)
T cd05612 86 GELFSYLRN----SGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT--- 155 (291)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCCc---
Confidence 999999864 34689999999999999999999999 99999999999999999999999999998654321
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
....|++.|+|||++.+..++.++|||||||++|+|++|+.||...+.... . ..... ..
T Consensus 156 --~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~---~---~~i~~-~~------------ 214 (291)
T cd05612 156 --WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI---Y---EKILA-GK------------ 214 (291)
T ss_pred --ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---H---HHHHh-CC------------
Confidence 122389999999999988899999999999999999999999976543211 1 11000 00
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHH
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRPR-----MSHVVH 501 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 501 (513)
...+...+..+.+||.+||+.||.+||+ ++++++
T Consensus 215 --~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 215 --LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred --cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 0011123557899999999999999995 888775
No 51
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.8e-41 Score=328.68 Aligned_cols=263 Identities=17% Similarity=0.208 Sum_probs=195.2
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.+.||.|+||.||+|... +++.||+|+++.... .....+.+|+.++++++||||+++++++.+.+..++||||++ ++
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~ 88 (288)
T cd07871 10 LDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SD 88 (288)
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-cC
Confidence 456799999999999965 588999999975432 234567899999999999999999999999999999999996 48
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++..........
T Consensus 89 l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~-- 160 (288)
T cd07871 89 LKQYLDNC---GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY-- 160 (288)
T ss_pred HHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccc--
Confidence 99888642 34578999999999999999999999 99999999999999999999999999997653322111
Q ss_pred eecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhH-----Hhh----ccccccc
Q 010309 388 VMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATP-----LVQ----SHRYLEL 457 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~ 457 (513)
....+++.|+|||++.+ ..++.++|||||||++|||+||++||...+..+.......... .+. ...+...
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T cd07871 161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSY 240 (288)
T ss_pred cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcc
Confidence 11237899999998875 5689999999999999999999999976543221111100000 000 0000001
Q ss_pred ccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 458 LDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
..+..............+.++.+|+.+||+.||.+|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 241 LFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred ccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 10100000000001123567899999999999999999999984
No 52
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.9e-41 Score=336.84 Aligned_cols=240 Identities=22% Similarity=0.259 Sum_probs=195.8
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
+||+|+||.||++... +|+.||||++.+.. ......+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 5899999999999964 58999999997642 2334577889999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|..++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....... ..
T Consensus 82 L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~--~~ 152 (328)
T cd05593 82 LFFHLSR----ERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA--TM 152 (328)
T ss_pred HHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCccc--cc
Confidence 9988854 34689999999999999999999999 999999999999999999999999999875432211 11
Q ss_pred eecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCC
Q 010309 388 VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSS 467 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (513)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...+... ... . .... .
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~---~~~---~-~~~~--------------~ 211 (328)
T cd05593 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFE---L-ILME--------------D 211 (328)
T ss_pred ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH---HHH---H-hccC--------------C
Confidence 22348999999999998899999999999999999999999997644321 110 0 0000 0
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Q 010309 468 DIPEAGVVQKVVDLVYACTQHVPSMRP-----RMSHVVH 501 (513)
Q Consensus 468 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 501 (513)
...+...+.++.+|+.+||+.||++|| ++.++++
T Consensus 212 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 212 IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 011123456799999999999999997 8888875
No 53
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=340.19 Aligned_cols=236 Identities=24% Similarity=0.342 Sum_probs=200.1
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
-++||+|+||.|+++..+ +++.+|||++++... .+.+..+.|.+++... +||.++.++..|.+.++.|.||||+.
T Consensus 373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~ 452 (694)
T KOG0694|consen 373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVA 452 (694)
T ss_pred EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecC
Confidence 467899999999999975 588999999998743 4456778898888887 59999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
||++..+.+ ...+++..+.-++..|+.||+|||++ +||+||||.+|||||.+|++||+|||+++..-.. .
T Consensus 453 Ggdm~~~~~-----~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~--g 522 (694)
T KOG0694|consen 453 GGDLMHHIH-----TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ--G 522 (694)
T ss_pred CCcEEEEEe-----cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccCCC--C
Confidence 999544433 36799999999999999999999999 9999999999999999999999999999865322 2
Q ss_pred cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 385 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
..+...+|||.|||||++.+..|+.+.|-|||||+||||+.|..||.+.++++ +++.++..
T Consensus 523 ~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee-------------------~FdsI~~d 583 (694)
T KOG0694|consen 523 DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE-------------------VFDSIVND 583 (694)
T ss_pred CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH-------------------HHHHHhcC
Confidence 34556779999999999999999999999999999999999999999877642 22222211
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRM 496 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 496 (513)
.-..+..++.+...+++++|..+|++|..+
T Consensus 584 --~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 584 --EVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred --CCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 222345677889999999999999999865
No 54
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.8e-41 Score=323.08 Aligned_cols=251 Identities=25% Similarity=0.403 Sum_probs=203.1
Q ss_pred CCceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 229 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
..+.||+|++|.||+|...++..||+|.+.... ...+.+.+|+.+++.++||||+++++.+.+.+..++||||+++++|
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 88 (261)
T cd05072 10 LVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSL 88 (261)
T ss_pred EeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcH
Confidence 345679999999999998888999999987543 3457889999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++... ....+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++........... .
T Consensus 89 ~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~-~ 162 (261)
T cd05072 89 LDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR-E 162 (261)
T ss_pred HHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCceecc-C
Confidence 9999652 235688899999999999999999999 999999999999999999999999999987643322111 1
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSS 467 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (513)
...++..|+|||++....++.++||||||+++|+|+| |..||....... .... .... ..
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~----~~~~-----~~-------- 222 (261)
T cd05072 163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD---VMSA----LQRG-----YR-------- 222 (261)
T ss_pred CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH---HHHH----HHcC-----CC--------
Confidence 1225678999999988889999999999999999998 999987543321 1111 0100 00
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 468 DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 468 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
.......+.++.+++.+||+.+|++||+++++++.|+++
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 223 MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 001112445789999999999999999999999999864
No 55
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1e-41 Score=301.74 Aligned_cols=267 Identities=22% Similarity=0.323 Sum_probs=213.7
Q ss_pred HhhCcccCCceecccCceEEEEEE-eCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCC-----c
Q 010309 222 ITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG-----D 295 (513)
Q Consensus 222 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~ 295 (513)
+.++.+...+.||+|||+-||++. ..++..+|+|++...+.++.+..++|++..++++||||++++++...+. .
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 344455566788999999999998 5678999999999887788889999999999999999999998876543 4
Q ss_pred eEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccccc
Q 010309 296 RYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLS 375 (513)
Q Consensus 296 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~ 375 (513)
.||+++|...|+|.+.+......+..+++.+++.|+.+|++||.+||+. .++++||||||.|||+++++.++|.|||.+
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCc
Confidence 7999999999999999988777777899999999999999999999998 345999999999999999999999999999
Q ss_pred ccCCccccccc-------eeecCcccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhh
Q 010309 376 KFVPWEVMQER-------TVMAGGTYGYLAPEFVY---RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWA 445 (513)
Q Consensus 376 ~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~ 445 (513)
........... ......|..|.|||++. +...+.++|||||||+||+|+.|..||+..-.
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---------- 246 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---------- 246 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh----------
Confidence 87653321111 11112688999999885 34568899999999999999999999974321
Q ss_pred hHHhhcccc-cccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 446 TPLVQSHRY-LELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 446 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
+.+.+ ..+..+.+ .......+++.+.++|+.||+.||.+||++.+++..++.+.
T Consensus 247 ----~GgSlaLAv~n~q~----s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 247 ----QGGSLALAVQNAQI----SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ----cCCeEEEeeecccc----ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 11111 11112122 11112237788999999999999999999999999988653
No 56
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=6.2e-41 Score=325.71 Aligned_cols=252 Identities=25% Similarity=0.406 Sum_probs=202.2
Q ss_pred ceecccCceEEEEEEeCC------CCEEEEEEecccchh-cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 231 RLLGDSKTGGTYSGILPD------GSRVAVKRLKRSSFQ-RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
+.||+|+||.||+|...+ +..||||.++..... ..+.+.+|+++++.++||||+++++++......++||||+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 90 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYM 90 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecC
Confidence 467999999999998633 478999999765433 4578999999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCC----------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccc
Q 010309 304 VNGPLDRWLHHIP----------RGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVG 373 (513)
Q Consensus 304 ~~gsL~~~l~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 373 (513)
++++|.+++.... .....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||
T Consensus 91 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~kl~d~g 167 (280)
T cd05049 91 EHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVVKIGDFG 167 (280)
T ss_pred CCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeEEECCcc
Confidence 9999999996531 2234588999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcc
Q 010309 374 LSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSH 452 (513)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 452 (513)
++................+++.|+|||++.+..++.++||||||+++|||++ |..||...+... .... ....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~---~~~~----~~~~ 240 (280)
T cd05049 168 MSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE---VIEC----ITQG 240 (280)
T ss_pred cceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHH----HHcC
Confidence 9976533221111111225778999999999999999999999999999998 999987654321 1111 0100
Q ss_pred cccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 453 RYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
. ...++...+..+.+++.+||+.||++||++.||++.|++
T Consensus 241 ~-------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 241 R-------------LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred C-------------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 0 011112345679999999999999999999999999864
No 57
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-42 Score=319.96 Aligned_cols=264 Identities=20% Similarity=0.286 Sum_probs=202.3
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEec--ccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEee-----CCceEEEEe
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLK--RSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD-----HGDRYIVYE 301 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-----~~~~~lv~e 301 (513)
.+.||+|+||.|..+... +|+.||||.+. .......++..+|+++|+.++|+||+.+++++.. -+..|+|+|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e 106 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE 106 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence 345799999999999964 68999999997 3444556788999999999999999999999865 356799999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
+| +.+|...++. +..++...+..++.|++.||.|+|+. +|+||||||.|+|++.+..+||+|||+|+.....
T Consensus 107 lM-etDL~~iik~----~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~ 178 (359)
T KOG0660|consen 107 LM-ETDLHQIIKS----QQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF 178 (359)
T ss_pred HH-hhHHHHHHHc----CccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeecccc
Confidence 99 7799999964 45599999999999999999999999 9999999999999999999999999999988643
Q ss_pred ccccceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccc--
Q 010309 382 VMQERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELL-- 458 (513)
Q Consensus 382 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 458 (513)
......+....|..|.|||++.. ..|+.+.||||.|||+.||++|++.|.+.+.....+++....+......+..+-
T Consensus 179 ~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~ 258 (359)
T KOG0660|consen 179 FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSE 258 (359)
T ss_pred CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccH
Confidence 11222122237899999998865 579999999999999999999999999877654333332211111111110000
Q ss_pred --cccccCCCCC--CC----cHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 459 --DPLISSLSSD--IP----EAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 459 --~~~~~~~~~~--~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.+.+++++.. .+ -.+..+...+|+.+||..||.+|+|++|+|+
T Consensus 259 ~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 259 KARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0011111110 00 0145567999999999999999999999986
No 58
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-42 Score=323.00 Aligned_cols=260 Identities=23% Similarity=0.309 Sum_probs=200.7
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCc-----eEEEEee
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGD-----RYIVYEF 302 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~-----~~lv~e~ 302 (513)
..+++|.|+||.||+|... +++.||||++-.+.. .-.+|+.+|+.+.|||||+++-+|..... ..+||||
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVley 103 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEY 103 (364)
T ss_pred eeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHh
Confidence 3568899999999999964 479999999865422 23479999999999999999988875432 3589999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC-CCeEEecccccccCCcc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE-FGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~~~~~~~~ 381 (513)
|+. +|.++++.....+..++...+.-+..||.+||+|||+. +|+||||||.|+|+|.+ +.+||+|||.|+.+...
T Consensus 104 mP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ 179 (364)
T KOG0658|consen 104 MPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG 179 (364)
T ss_pred chH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence 965 89999987656677899999999999999999999998 99999999999999987 78999999999998766
Q ss_pred ccccceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHh--h-------c
Q 010309 382 VMQERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLV--Q-------S 451 (513)
Q Consensus 382 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~--~-------~ 451 (513)
....... .|..|+|||.+.+. .|+.+.||||.|||+.||+-|++.|.+.+... ++.+..+-+- . .
T Consensus 180 epniSYi---cSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~d--QL~eIik~lG~Pt~e~I~~mn 254 (364)
T KOG0658|consen 180 EPNISYI---CSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVD--QLVEIIKVLGTPTREDIKSMN 254 (364)
T ss_pred CCceeEE---EeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHH--HHHHHHHHhCCCCHHHHhhcC
Confidence 6554333 68899999999874 79999999999999999999999999866542 2222211110 0 0
Q ss_pred ccccccccccccCCC-CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 452 HRYLELLDPLISSLS-SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 452 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....+...+.+.... ........++++.+|+.++|+.+|.+|.++.|++.
T Consensus 255 ~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 255 PNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred cccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 111111222221111 11123345678999999999999999999999985
No 59
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=9.1e-41 Score=319.44 Aligned_cols=248 Identities=28% Similarity=0.389 Sum_probs=197.8
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHH
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 309 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 309 (513)
.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 4799999999999974 68999999886542 234567899999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceee
Q 010309 310 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 389 (513)
Q Consensus 310 ~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 389 (513)
+++.. ....+++..++.++.|++.||.|||+. +++|+||||+|||++.++.+||+|||++..............
T Consensus 82 ~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 155 (252)
T cd05084 82 TFLRT---EGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM 155 (252)
T ss_pred HHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCCC
Confidence 99863 234589999999999999999999999 999999999999999999999999999876543211111111
Q ss_pred cCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 390 AGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 390 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...+..|+|||.+.+..++.++||||||+++|||++ |..||........ ....... . ..
T Consensus 156 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~-------~~~~~~~-----~--------~~ 215 (252)
T cd05084 156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT-------REAIEQG-----V--------RL 215 (252)
T ss_pred CCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH-------HHHHHcC-----C--------CC
Confidence 113467999999988889999999999999999998 8888865433210 0000000 0 00
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
..+...+..+.+++.+||+.+|++|||+.+|++.|+.
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 216 PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 1112345679999999999999999999999999863
No 60
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-41 Score=347.90 Aligned_cols=257 Identities=21% Similarity=0.296 Sum_probs=209.4
Q ss_pred cCCceecccCceEEEEEEeCCC-CEEEEEEecccchhcHHHHHHHHHHHhhcC-CCcEeeeeeEE-ee------CCceEE
Q 010309 228 EGNRLLGDSKTGGTYSGILPDG-SRVAVKRLKRSSFQRKKEFYSEIGRFARLH-HPNLVAVKGCC-YD------HGDRYI 298 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~-~~------~~~~~l 298 (513)
...++|.+|||+.||+|....+ ..||+|++-..+....+.+.+|+.+|++|. |+|||.+++.. .. .-+.+|
T Consensus 40 ~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evll 119 (738)
T KOG1989|consen 40 TVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLL 119 (738)
T ss_pred EEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEe
Confidence 3457899999999999998766 999999998777778889999999999996 99999999932 21 124689
Q ss_pred EEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccC
Q 010309 299 VYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 378 (513)
Q Consensus 299 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~ 378 (513)
+||||.+|.|-+++..+.. ..|++.++++|+.|+++|+++||.. +++|||||||.|||||+.+++.||||||.+...
T Consensus 120 LmEyC~gg~Lvd~mn~Rlq--~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~ 196 (738)
T KOG1989|consen 120 LMEYCKGGSLVDFMNTRLQ--TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTK 196 (738)
T ss_pred ehhhccCCcHHHHHHHHHh--ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence 9999999999999986433 4499999999999999999999986 778999999999999999999999999998754
Q ss_pred Ccccccc-------ceeecCcccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHH
Q 010309 379 PWEVMQE-------RTVMAGGTYGYLAPEFVY---RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPL 448 (513)
Q Consensus 379 ~~~~~~~-------~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 448 (513)
....... ......-|+.|+|||++. +.+.++|+|||+|||+||.|+....||+.....
T Consensus 197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l------------ 264 (738)
T KOG1989|consen 197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL------------ 264 (738)
T ss_pred cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce------------
Confidence 3221100 111122689999999874 568899999999999999999999999865321
Q ss_pred hhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCCC
Q 010309 449 VQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQPP 510 (513)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 510 (513)
.++.... ...+...++..+.+||+.||+.||.+||++-+|+..+.+++..+
T Consensus 265 -------aIlng~Y----~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 265 -------AILNGNY----SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred -------eEEeccc----cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 1222111 22333578899999999999999999999999999998887654
No 61
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4.6e-41 Score=327.92 Aligned_cols=265 Identities=18% Similarity=0.209 Sum_probs=197.6
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
..+.||+|+||.||+++.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (287)
T cd07848 5 VLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEK 84 (287)
T ss_pred EEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCC
Confidence 3456799999999999975 58899999997542 22346788999999999999999999999999999999999998
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
++|..+... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 85 ~~l~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (287)
T cd07848 85 NMLELLEEM----PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNAN 157 (287)
T ss_pred CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccccccc
Confidence 877655432 34689999999999999999999999 99999999999999999999999999998764322211
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHh-hhH--------Hhhcccccc
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEW-ATP--------LVQSHRYLE 456 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~ 456 (513)
. ....|++.|+|||++.+..++.++|||||||++|||++|++||...+.......... ..+ .........
T Consensus 158 ~-~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07848 158 Y-TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHG 236 (287)
T ss_pred c-cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcc
Confidence 1 122388999999999988899999999999999999999999986543211100000 000 000000000
Q ss_pred cccccccCCC--CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 457 LLDPLISSLS--SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 457 ~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
...+...... ........+..+.+|+.+||+.||++|||++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 237 LRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000 00001124567999999999999999999999885
No 62
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=7e-41 Score=326.88 Aligned_cols=258 Identities=28% Similarity=0.414 Sum_probs=205.1
Q ss_pred CCceecccCceEEEEEEeC------CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 229 GNRLLGDSKTGGTYSGILP------DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
..+.||+|+||.||++... ++..+|+|.+........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (288)
T cd05093 9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 88 (288)
T ss_pred eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEc
Confidence 3456799999999999842 3457999999876555667899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCC---------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccc
Q 010309 303 VVNGPLDRWLHHIP---------RGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVG 373 (513)
Q Consensus 303 ~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 373 (513)
+++++|.+++.... .....+++..++.++.|++.||+|||+. +++||||||+|||+++++.++|+|||
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg 165 (288)
T cd05093 89 MKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFG 165 (288)
T ss_pred CCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEeccCC
Confidence 99999999986432 1123589999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcc
Q 010309 374 LSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSH 452 (513)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 452 (513)
++................++..|+|||++.+..++.++||||||+++|+|++ |..||....... ... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~---~~~----~i~~~ 238 (288)
T cd05093 166 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VIE----CITQG 238 (288)
T ss_pred ccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHHcC
Confidence 9986543322111112225778999999988889999999999999999998 899987554321 111 01111
Q ss_pred cccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCC
Q 010309 453 RYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQP 509 (513)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 509 (513)
... . .+...+.++.+|+.+||+.||.+|||+.++++.|+++...
T Consensus 239 ~~~------------~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 239 RVL------------Q-RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CcC------------C-CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 000 0 0112345699999999999999999999999999987654
No 63
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1e-40 Score=324.72 Aligned_cols=254 Identities=28% Similarity=0.467 Sum_probs=202.1
Q ss_pred CceecccCceEEEEEEeCC------CCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 230 NRLLGDSKTGGTYSGILPD------GSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
.+.||+|+||.||+|.... ...||+|.+.... ......+.+|+.++.+++||||+++++++...+..+++|||
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~ 89 (283)
T cd05048 10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEY 89 (283)
T ss_pred hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEec
Confidence 3457999999999998643 2579999997543 23346789999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEe
Q 010309 303 VVNGPLDRWLHHIPR------------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM 370 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 370 (513)
+++++|.+++..... ....+++..++.++.|++.||.|||+. +++|+||||+||++++++.++|+
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~~~~L~ 166 (283)
T cd05048 90 LAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGLTVKIS 166 (283)
T ss_pred CCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCCcEEEC
Confidence 999999999965321 114588999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHh
Q 010309 371 GVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLV 449 (513)
Q Consensus 371 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 449 (513)
|||++................+++.|+|||.+.+..++.++|||||||++|||++ |..||.+....+ ... .+
T Consensus 167 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~---~~~----~i 239 (283)
T cd05048 167 DFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE---VIE----MI 239 (283)
T ss_pred CCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH----HH
Confidence 9999986543322111222236788999999988899999999999999999998 999997654321 111 11
Q ss_pred hcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 450 QSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
.... . . ..+..++.++.+|+.+||+.||.+||++.+|++.|+.+
T Consensus 240 ~~~~--------~----~-~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 240 RSRQ--------L----L-PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HcCC--------c----C-CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1110 0 0 11234567899999999999999999999999999863
No 64
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.5e-40 Score=320.61 Aligned_cols=257 Identities=23% Similarity=0.346 Sum_probs=206.6
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEeccc---chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS---SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
..+.||+|+||.||+|... +++.||||.+... .......+.+|+.+++.++||||+++++++.+.+..++|+||++
T Consensus 6 i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 85 (267)
T cd08228 6 IEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELAD 85 (267)
T ss_pred eeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecC
Confidence 3456799999999999964 6899999988643 22334578899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+++|.+++.........+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.........
T Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~ 162 (267)
T cd08228 86 AGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 162 (267)
T ss_pred CCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccchhHH
Confidence 9999998865444445689999999999999999999999 9999999999999999999999999998876543221
Q ss_pred cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 385 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
. ....+++.|+|||.+.+..++.++|+||||+++|||++|..||...... ........ ...
T Consensus 163 ~--~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~----~~~~~~~~-~~~------------ 223 (267)
T cd08228 163 A--HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LFSLCQKI-EQC------------ 223 (267)
T ss_pred H--hcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc----HHHHHHHH-hcC------------
Confidence 1 1123788999999998888899999999999999999999998654321 01111110 000
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
.....+....+..+.+++.+||+.+|++||++.+|++.|+++.
T Consensus 224 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 224 DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0011222345677999999999999999999999999998864
No 65
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.5e-41 Score=336.23 Aligned_cols=240 Identities=25% Similarity=0.325 Sum_probs=196.2
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
..+.||+|+||.||++... +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 22 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 101 (329)
T PTZ00263 22 MGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVV 101 (329)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCC
Confidence 3457899999999999975 589999999975422 234568899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++........
T Consensus 102 ~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~- 173 (329)
T PTZ00263 102 GGELFTHLRK----AGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF- 173 (329)
T ss_pred CChHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc-
Confidence 9999999864 34688999999999999999999999 999999999999999999999999999986643221
Q ss_pred cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 385 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
...||+.|+|||++.+..++.++|||||||++|||++|..||...+... .. .... ... .
T Consensus 174 ----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~~---~~i~-~~~--------~-- 232 (329)
T PTZ00263 174 ----TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR---IY---EKIL-AGR--------L-- 232 (329)
T ss_pred ----eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH---HH---HHHh-cCC--------c--
Confidence 2348999999999999889999999999999999999999997644311 10 1100 000 0
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPR-----MSHVVH 501 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 501 (513)
..+...+..+.+|+.+||+.||.+||+ ++++++
T Consensus 233 ----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 233 ----KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ----CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 001123456899999999999999997 577763
No 66
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.5e-40 Score=318.68 Aligned_cols=247 Identities=25% Similarity=0.425 Sum_probs=199.0
Q ss_pred CceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHH
Q 010309 230 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 309 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 309 (513)
.+.||+|+||.||++...++..+|+|.+.... ....++.+|+.++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 87 (256)
T cd05114 9 MKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLL 87 (256)
T ss_pred eeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHH
Confidence 34679999999999999888899999987543 34567899999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceee
Q 010309 310 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 389 (513)
Q Consensus 310 ~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 389 (513)
+++... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||.+........... ..
T Consensus 88 ~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~-~~ 160 (256)
T cd05114 88 NYLRQR---QGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS-SG 160 (256)
T ss_pred HHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCceecc-CC
Confidence 998642 23588999999999999999999999 999999999999999999999999999886543222111 11
Q ss_pred cCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 390 AGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 390 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
..++..|+|||++.+..++.++||||||+++|||++ |+.||...+... ... ....... ...
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~---~~~---~i~~~~~---~~~--------- 222 (256)
T cd05114 161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE---VVE---MISRGFR---LYR--------- 222 (256)
T ss_pred CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHH---HHHCCCC---CCC---------
Confidence 125668999999988889999999999999999999 899987654321 111 1111000 000
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
+...+..+.+++.+||+.+|++||+++++++.|.
T Consensus 223 --~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 223 --PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred --CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1112456899999999999999999999999873
No 67
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.3e-40 Score=320.16 Aligned_cols=251 Identities=29% Similarity=0.471 Sum_probs=203.2
Q ss_pred CCceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 229 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
..+.||+|++|.||+|...+++.||+|.++... ...+++.+|+.++++++||||+++++++...+..++||||+++++|
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 88 (261)
T cd05068 10 LLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSL 88 (261)
T ss_pred eEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcH
Confidence 346789999999999998778899999997653 3456789999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++........... .
T Consensus 89 ~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~ 162 (261)
T cd05068 89 LEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAR-E 162 (261)
T ss_pred HHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCccccc-C
Confidence 99996522 35689999999999999999999999 999999999999999999999999999987653221111 1
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSS 467 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (513)
....+..|+|||++.+..++.++||||||+++|||+| |+.||....... ... ...... .
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~----~~~~~~-------------~ 222 (261)
T cd05068 163 GAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE---VLQ----QVDQGY-------------R 222 (261)
T ss_pred CCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHH----HHHcCC-------------C
Confidence 1113457999999988889999999999999999999 999987644221 111 010000 0
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 468 DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 468 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
...+...+..+.+++.+||+.+|++||++.+|++.|+.+
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 223 MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 001122456799999999999999999999999999864
No 68
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=8.1e-41 Score=339.34 Aligned_cols=260 Identities=28% Similarity=0.401 Sum_probs=202.6
Q ss_pred ccCCceecccCceEEEEEEeC------CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcC-CCcEeeeeeEEeeCCceEE
Q 010309 227 SEGNRLLGDSKTGGTYSGILP------DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLH-HPNLVAVKGCCYDHGDRYI 298 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~l 298 (513)
....++||+|+||.||+|... .+..||||+++... ....+.+.+|+.+|+++. ||||+++++++.+.+..+|
T Consensus 39 ~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~l 118 (400)
T cd05105 39 LVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYI 118 (400)
T ss_pred eehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEE
Confidence 344567899999999999852 13479999997543 233467899999999995 9999999999999999999
Q ss_pred EEeeccCCCHHHHhccCCC-------------------------------------------------------------
Q 010309 299 VYEFVVNGPLDRWLHHIPR------------------------------------------------------------- 317 (513)
Q Consensus 299 v~e~~~~gsL~~~l~~~~~------------------------------------------------------------- 317 (513)
||||+++|+|.++|.....
T Consensus 119 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (400)
T cd05105 119 ITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEAS 198 (400)
T ss_pred EEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhh
Confidence 9999999999998864210
Q ss_pred -------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCC
Q 010309 318 -------------------------------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 366 (513)
Q Consensus 318 -------------------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~ 366 (513)
....+++..+..++.|++.||+|||+. +|+|+||||+|||++.++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~~~~ 275 (400)
T cd05105 199 KYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQGKI 275 (400)
T ss_pred hhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeCCCE
Confidence 113478888999999999999999999 9999999999999999999
Q ss_pred eEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhh
Q 010309 367 AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWA 445 (513)
Q Consensus 367 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 445 (513)
+||+|||++................+++.|+|||.+.+..++.++||||||+++|||++ |..||....... ...
T Consensus 276 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~--~~~--- 350 (400)
T cd05105 276 VKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS--TFY--- 350 (400)
T ss_pred EEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH--HHH---
Confidence 99999999986543222111122236778999999998899999999999999999997 999987543210 000
Q ss_pred hHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcC
Q 010309 446 TPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQ 508 (513)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 508 (513)
...... .. ...+...+..+.+++.+||+.||++||++.+|.+.|+++.+
T Consensus 351 -~~~~~~-----~~--------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 351 -NKIKSG-----YR--------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred -HHHhcC-----CC--------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 000000 00 00112345679999999999999999999999999998754
No 69
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.4e-40 Score=325.25 Aligned_cols=258 Identities=26% Similarity=0.416 Sum_probs=206.9
Q ss_pred CceecccCceEEEEEEeC------CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 230 NRLLGDSKTGGTYSGILP------DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
.+.||+|+||.||++... ++..+++|.+........+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 89 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYM 89 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecC
Confidence 457899999999999842 35579999998776666678999999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEec
Q 010309 304 VNGPLDRWLHHIPR------------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 371 (513)
Q Consensus 304 ~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 371 (513)
++++|.+++..... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.++|+|
T Consensus 90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~d 166 (291)
T cd05094 90 KHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGD 166 (291)
T ss_pred CCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEECC
Confidence 99999999964321 124589999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhh
Q 010309 372 VGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQ 450 (513)
Q Consensus 372 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 450 (513)
||++................++..|+|||.+.+..++.++||||||+++|||+| |..||...+... ..+ ...
T Consensus 167 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~----~~~ 239 (291)
T cd05094 167 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---VIE----CIT 239 (291)
T ss_pred CCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHh
Confidence 999976543322111112226788999999998899999999999999999999 999987654321 111 011
Q ss_pred cccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCCC
Q 010309 451 SHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQPP 510 (513)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 510 (513)
..... ......+..+.+++.+||+.||++|||+++|++.|+++..+.
T Consensus 240 ~~~~~-------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 240 QGRVL-------------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred CCCCC-------------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 11100 011123457999999999999999999999999999886553
No 70
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.3e-41 Score=335.26 Aligned_cols=248 Identities=21% Similarity=0.237 Sum_probs=199.8
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|+.++..++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g 85 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPG 85 (333)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCC
Confidence 456799999999999975 589999999976422 2345688999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 86 ~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~---- 154 (333)
T cd05600 86 GDFRTLLNN----LGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTY---- 154 (333)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCcccccc----
Confidence 999999954 34689999999999999999999999 9999999999999999999999999999865431
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
.....||+.|+|||++.+..++.++|||||||++|||++|..||...+.... .... ... ...+....
T Consensus 155 -~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~---~~~i---~~~---~~~~~~~~--- 221 (333)
T cd05600 155 -ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET---WENL---KYW---KETLQRPV--- 221 (333)
T ss_pred -cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH---HHHH---Hhc---cccccCCC---
Confidence 1122389999999999999999999999999999999999999976543211 1100 000 00000000
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
...+....++++.+++.+||..+|.+||+++++++.
T Consensus 222 -~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 222 -YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred -CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 011112356789999999999999999999999863
No 71
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.7e-41 Score=332.75 Aligned_cols=264 Identities=22% Similarity=0.344 Sum_probs=198.9
Q ss_pred cCCceecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 228 EGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
+..+.||+|+||.||++... ++..+|+|.+.... ......+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 8 ~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 87 (333)
T cd06650 8 EKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 87 (333)
T ss_pred heeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCC
Confidence 34456799999999999975 58899999887642 23346789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
++|.+++.. ...+++..+..++.|++.||.|||+.. +|+|+||||+|||++.++.+||+|||++........
T Consensus 88 ~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~-- 159 (333)
T cd06650 88 GSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-- 159 (333)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcc--
Confidence 999999964 345889999999999999999999741 799999999999999999999999999876533211
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHh-hcc------------
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLV-QSH------------ 452 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~------------ 452 (513)
....++..|+|||++.+..++.++|||||||++|||++|+.||................... ...
T Consensus 160 --~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (333)
T cd06650 160 --NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRP 237 (333)
T ss_pred --ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccch
Confidence 12238899999999998889999999999999999999999997644321111100000000 000
Q ss_pred ------------cccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 453 ------------RYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 453 ------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
......+..........+....+.++.+|+.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 238 LSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred hhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 0000000001111111111124567899999999999999999999975
No 72
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=9.1e-41 Score=324.67 Aligned_cols=247 Identities=20% Similarity=0.260 Sum_probs=197.1
Q ss_pred ecccCceEEEEEEeC-CCCEEEEEEecccchh---cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 233 LGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ---RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 233 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
||+|+||+||++... +++.||+|.+...... ..+.+..|+.+++.++||||+++.+++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999864 6889999999754322 235677899999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
..++.........+++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||++......... ..
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~--~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK--TK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc--cc
Confidence 988865434456799999999999999999999999 9999999999999999999999999999765433221 11
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...||+.|+|||++.+..++.++||||||+++|||++|+.||......... ..... ..... ..
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~--~~~~~---------~~~~~------~~ 218 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN--KELKQ---------RILND------SV 218 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH--HHHHH---------hhccc------CC
Confidence 223899999999999999999999999999999999999999764321100 00000 00000 00
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRP-----RMSHVVH 501 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 501 (513)
..+...++.+.+++.+||+.||++|| +++++++
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 219 TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 11223566799999999999999999 7777875
No 73
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.5e-40 Score=320.15 Aligned_cols=250 Identities=29% Similarity=0.482 Sum_probs=202.1
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.+.||+|++|.||+|... .++.||+|.+.... .....+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (263)
T cd05052 11 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 89 (263)
T ss_pred eeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcH
Confidence 346799999999999965 48899999987543 3456789999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++... ....+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++............
T Consensus 90 ~~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~- 163 (263)
T cd05052 90 LDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA- 163 (263)
T ss_pred HHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccceeeccC-
Confidence 9998642 234689999999999999999999999 9999999999999999999999999999876543221111
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSS 467 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (513)
....+..|+|||.+.+..++.++||||||+++|||++ |..||...+... .... .... .. .
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~~~~----~~~~-----~~-------~ 224 (263)
T cd05052 164 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYEL----LEKG-----YR-------M 224 (263)
T ss_pred CCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH----HHCC-----CC-------C
Confidence 1114568999999988899999999999999999998 999987643321 1110 0000 00 0
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 468 DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 468 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
..+...+.++.+++.+||+.||++|||+.++++.|+++
T Consensus 225 -~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 -ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11123456799999999999999999999999999875
No 74
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-41 Score=332.92 Aligned_cols=247 Identities=21% Similarity=0.299 Sum_probs=208.1
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCc-eEEEEeecc
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGD-RYIVYEFVV 304 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~-~~lv~e~~~ 304 (513)
..+.+|+|+||.+++.+.+ ++..||+|.+.-.. ...++...+|+.++++++|||||.+.+.+.+++. .+|||+|++
T Consensus 8 ~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~e 87 (426)
T KOG0589|consen 8 VLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCE 87 (426)
T ss_pred hhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecC
Confidence 3456799999999999864 57899999997553 2334578999999999999999999999999998 899999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
||+|.+.|... .+..++++.+..++.|++.|+.|||++ .|+|||||+.|||++.+..+||+|||+|+.+......
T Consensus 88 Gg~l~~~i~~~--k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~ 162 (426)
T KOG0589|consen 88 GGDLAQLIKEQ--KGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL 162 (426)
T ss_pred CCCHHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence 99999999763 357799999999999999999999999 9999999999999999999999999999998766522
Q ss_pred cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 385 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
.. ...||+.||.||++.+.+|..|+|||||||++|||++-+++|...+.. .++.. ....
T Consensus 163 a~--tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~---~Li~k----------------i~~~ 221 (426)
T KOG0589|consen 163 AS--TVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS---ELILK----------------INRG 221 (426)
T ss_pred hh--eecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH---HHHHH----------------Hhhc
Confidence 22 233999999999999999999999999999999999999999876532 11111 1111
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
. ....+...+.++..+|..||+.+|..||++.++|..
T Consensus 222 ~-~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 222 L-YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred c-CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1 122344677889999999999999999999999975
No 75
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.2e-40 Score=320.30 Aligned_cols=250 Identities=27% Similarity=0.481 Sum_probs=206.3
Q ss_pred CceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHH
Q 010309 230 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 309 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 309 (513)
.+.||.|++|.||+|...++..+|+|.+..........+.+|+.+++.++||||+++++++.+.+..++||||+++++|.
T Consensus 11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (261)
T cd05148 11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLL 90 (261)
T ss_pred hhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHH
Confidence 44679999999999998889999999998776656778999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceee
Q 010309 310 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 389 (513)
Q Consensus 310 ~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 389 (513)
+++... ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||.+........... .
T Consensus 91 ~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~--~ 163 (261)
T cd05148 91 AFLRSP--EGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSS--D 163 (261)
T ss_pred HHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcccccc--C
Confidence 999752 335689999999999999999999999 999999999999999999999999999987643322111 2
Q ss_pred cCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 390 AGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 390 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
..++..|+|||.+.+..++.++||||||+++|+|++ |..||...+.. ....... ... ..
T Consensus 164 ~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~---~~~~~~~---~~~--------------~~ 223 (261)
T cd05148 164 KKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH---EVYDQIT---AGY--------------RM 223 (261)
T ss_pred CCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH---HHHHHHH---hCC--------------cC
Confidence 225678999999988889999999999999999998 89999765421 1111110 000 00
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
..+...++.+.+++.+||+.||++|||+.++++.|+.+
T Consensus 224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 224 PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 01123456799999999999999999999999999864
No 76
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=8.8e-41 Score=330.59 Aligned_cols=256 Identities=21% Similarity=0.372 Sum_probs=201.2
Q ss_pred cCCceecccCceEEEEEEeC-CCC----EEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEe
Q 010309 228 EGNRLLGDSKTGGTYSGILP-DGS----RVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYE 301 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 301 (513)
...+.||+|+||.||+|.+. ++. .||+|.++... ....+++.+|+.+++.++||||+++++++... ..++|+|
T Consensus 10 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e 88 (316)
T cd05108 10 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQ 88 (316)
T ss_pred eeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceeeee
Confidence 33457799999999999853 333 48999997543 34456788999999999999999999998765 5679999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
|+++|+|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 89 ~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 89 LMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred cCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccccCC
Confidence 99999999998742 34588999999999999999999999 9999999999999999999999999999876543
Q ss_pred ccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 382 VMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 382 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
..........++..|+|||++.+..++.++||||||+++|||++ |..||.+......... .....
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~-------~~~~~------- 228 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-------LEKGE------- 228 (316)
T ss_pred CcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-------HhCCC-------
Confidence 32221112224678999999999999999999999999999998 9999876543211111 11000
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCCC
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQPP 510 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 510 (513)
.. ..+..++.++.+++.+||+.||++||++.+++..|..+...+
T Consensus 229 ~~------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 229 RL------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred CC------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 00 001123456899999999999999999999999998776554
No 77
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.7e-40 Score=317.10 Aligned_cols=256 Identities=24% Similarity=0.385 Sum_probs=207.6
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEeccc---chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS---SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|++|.||+|... +|+.||+|.++.. .....+.+.+|++++++++|+||+++++.+...+..++||||+++
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADA 86 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCC
Confidence 456799999999999976 7999999998643 223356789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
++|.+++.........+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++..........
T Consensus 87 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 163 (267)
T cd08224 87 GDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 163 (267)
T ss_pred CCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccCCCccc
Confidence 999999876444456689999999999999999999999 99999999999999999999999999987654332111
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
....++..|+|||.+.+..++.++||||||+++|+|++|+.||...... ..+...... ...
T Consensus 164 --~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~-------------~~~ 224 (267)
T cd08224 164 --HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKKIE-------------KCD 224 (267)
T ss_pred --ceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc----HHHHHhhhh-------------cCC
Confidence 1223788999999998888999999999999999999999998654321 111111000 000
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
....+....+..+.++|.+||+.+|++|||+.+|++.|+++.
T Consensus 225 ~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 225 YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 111222345668999999999999999999999999998874
No 78
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2e-40 Score=321.69 Aligned_cols=247 Identities=20% Similarity=0.282 Sum_probs=194.9
Q ss_pred ecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 233 LGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 233 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
||+|+||.||++... +|+.||+|.+..... .....+..|++++++++||||+++++++.+....++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999864 589999999975322 2234566799999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.. .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++......... .
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~---~ 152 (277)
T cd05607 81 KYHIYN--VGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTI---T 152 (277)
T ss_pred HHHHHh--ccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCcee---e
Confidence 988854 2334588999999999999999999999 9999999999999999999999999998766432211 1
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...|+..|+|||++.+..++.++|||||||++|||++|+.||........ ......... .... .
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~--~~~~~~~~~---------~~~~-----~ 216 (277)
T cd05607 153 QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA--KEELKRRTL---------EDEV-----K 216 (277)
T ss_pred ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh--HHHHHHHhh---------cccc-----c
Confidence 22388999999999988899999999999999999999999975432110 000000000 0000 0
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQL 503 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 503 (513)
......++++.+|+.+||+.||++||++.|+++.+
T Consensus 217 ~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 217 FEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred cccccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 11123456799999999999999999997766433
No 79
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=3.2e-41 Score=335.00 Aligned_cols=241 Identities=22% Similarity=0.255 Sum_probs=194.8
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
++||+|+||.||++... +|+.||+|+++... ......+.+|++++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999864 68999999997642 223456778999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD-KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
+|..++.. ...+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||++.........
T Consensus 81 ~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~- 152 (325)
T cd05594 81 ELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT- 152 (325)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcc-
Confidence 99988854 3468999999999999999999997 7 9999999999999999999999999998754322111
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
.....||+.|+|||++.+..++.++|||||||++|||++|..||...+....... .....
T Consensus 153 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~-------i~~~~------------ 212 (325)
T cd05594 153 -MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL-------ILMEE------------ 212 (325)
T ss_pred -cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHH-------HhcCC------------
Confidence 1123389999999999988999999999999999999999999976543211110 00000
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRP-----RMSHVVH 501 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 501 (513)
...+...++++.+|+.+||+.||++|+ ++.++++
T Consensus 213 --~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 213 --IRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred --CCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 001122456789999999999999996 8999875
No 80
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=8e-41 Score=331.75 Aligned_cols=241 Identities=22% Similarity=0.290 Sum_probs=194.1
Q ss_pred ceecccCceEEEEEEe----CCCCEEEEEEecccc----hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 231 RLLGDSKTGGTYSGIL----PDGSRVAVKRLKRSS----FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
+.||+|+||.||++.. .+++.||||+++... ......+.+|+.+|+.++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 3679999999999985 357899999997542 12335678899999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~ 382 (513)
+++++|.+++.. ...+.+..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLER----EGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 999999999854 34688889999999999999999999 99999999999999999999999999987543222
Q ss_pred cccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 383 MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 383 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
.. .....||+.|+|||++.+..++.++||||||+++|||++|+.||...+... . ...... ...
T Consensus 155 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~---~---~~~~~~---------~~~ 217 (323)
T cd05584 155 TV--THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK---T---IDKILK---------GKL 217 (323)
T ss_pred Cc--ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH---H---HHHHHc---------CCC
Confidence 11 112348999999999998889999999999999999999999997654321 0 111100 000
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRP-----RMSHVVH 501 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 501 (513)
..+...++.+.++|.+||+.||++|| +++++++
T Consensus 218 ------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 218 ------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred ------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 00112356789999999999999999 7888765
No 81
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.7e-41 Score=307.77 Aligned_cols=265 Identities=20% Similarity=0.243 Sum_probs=199.7
Q ss_pred ccCCceecccCceEEEEEEeC-CCCEEEEEEecccchhc--HHHHHHHHHHHhhcCCCcEeeeeeEEeeC--CceEEEEe
Q 010309 227 SEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQR--KKEFYSEIGRFARLHHPNLVAVKGCCYDH--GDRYIVYE 301 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lv~e 301 (513)
...+++ ++|.||.||+|+++ +++.||+|+++...... .-.-++|+.+|.+++|||||.+-.+.... +..|||||
T Consensus 79 e~lnrI-~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe 157 (419)
T KOG0663|consen 79 EKLNRI-EEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVME 157 (419)
T ss_pred HHHhhc-ccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHH
Confidence 334444 99999999999975 58999999998653221 23458999999999999999998887643 57899999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
||++ +|..++.... .++...++.-+..|+++||+|||.+ .|+||||||+|+|++..|.+||+|||+|+.+...
T Consensus 158 ~~Eh-DLksl~d~m~---q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 158 YVEH-DLKSLMETMK---QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred HHHh-hHHHHHHhcc---CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 9965 9999998643 6799999999999999999999999 9999999999999999999999999999988765
Q ss_pred ccccceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccc-----c
Q 010309 382 VMQERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRY-----L 455 (513)
Q Consensus 382 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 455 (513)
....... .-|..|.|||++.+. .|+++.|+||+|||+.||+++++.|.+..+......+-.......+.-+ .
T Consensus 231 ~k~~T~l--VVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l 308 (419)
T KOG0663|consen 231 LKPYTPL--VVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL 308 (419)
T ss_pred cccCcce--EEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence 3322222 268999999999875 6899999999999999999999999887654322211100000000000 0
Q ss_pred cccc------ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 456 ELLD------PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 456 ~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.... .....+.........++.-.+|+..+|..||.+|.|++|.|+
T Consensus 309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 0000 000001111112225577889999999999999999999885
No 82
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.1e-40 Score=332.28 Aligned_cols=260 Identities=26% Similarity=0.367 Sum_probs=201.4
Q ss_pred cCCceecccCceEEEEEEeC------CCCEEEEEEecccc-hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeC-CceEE
Q 010309 228 EGNRLLGDSKTGGTYSGILP------DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDH-GDRYI 298 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~-~~~~l 298 (513)
+..++||+|+||.||+|... +++.||+|+++... ....+.+.+|+.++.++ +||||+++++++... ...++
T Consensus 10 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~ 89 (337)
T cd05054 10 KLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMV 89 (337)
T ss_pred hhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEE
Confidence 34567899999999999742 35789999997543 22345678899999999 899999999988654 56789
Q ss_pred EEeeccCCCHHHHhccCCCC---------------------------------------------------------CCC
Q 010309 299 VYEFVVNGPLDRWLHHIPRG---------------------------------------------------------GRS 321 (513)
Q Consensus 299 v~e~~~~gsL~~~l~~~~~~---------------------------------------------------------~~~ 321 (513)
+|||+++++|.+++...... ...
T Consensus 90 v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (337)
T cd05054 90 IVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEP 169 (337)
T ss_pred EEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcC
Confidence 99999999999998542110 136
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeecCcccccccccc
Q 010309 322 LDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEF 401 (513)
Q Consensus 322 l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~ 401 (513)
+++..+..++.||+.||+|||+. +|+||||||+|||++.++.++|+|||++..+.............++..|+|||+
T Consensus 170 l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 246 (337)
T cd05054 170 LTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES 246 (337)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence 88999999999999999999999 999999999999999999999999999987643322222222235678999999
Q ss_pred cccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHH
Q 010309 402 VYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVD 480 (513)
Q Consensus 402 ~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (513)
+.+..++.++|||||||++|||++ |..||......+ .+. ....... . . ..+...++++.+
T Consensus 247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~--~~~----~~~~~~~-----~-------~-~~~~~~~~~~~~ 307 (337)
T cd05054 247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE--EFC----RRLKEGT-----R-------M-RAPEYATPEIYS 307 (337)
T ss_pred hcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH--HHH----HHHhccC-----C-------C-CCCccCCHHHHH
Confidence 999999999999999999999998 999987533211 010 0011000 0 0 011234567999
Q ss_pred HHHHhcCCCCCCCCCHHHHHHHHhcCcCC
Q 010309 481 LVYACTQHVPSMRPRMSHVVHQLQQLAQP 509 (513)
Q Consensus 481 li~~cl~~dP~~RPs~~evl~~L~~~~~~ 509 (513)
++.+||+.+|++||++.+|++.|+++.+.
T Consensus 308 l~~~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 308 IMLDCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999987654
No 83
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.7e-40 Score=346.06 Aligned_cols=251 Identities=23% Similarity=0.285 Sum_probs=200.4
Q ss_pred cCCceecccCceEEEEEEe-CCCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCC--------ce
Q 010309 228 EGNRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG--------DR 296 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--------~~ 296 (513)
...++||+|+||.||++.. .+|+.||||++.... ......+.+|+.++..++|+||+++.+.+...+ ..
T Consensus 35 ~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i 114 (496)
T PTZ00283 35 WISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMI 114 (496)
T ss_pred EEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEE
Confidence 3456789999999999985 469999999997542 334467889999999999999999988775432 25
Q ss_pred EEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccc
Q 010309 297 YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK 376 (513)
Q Consensus 297 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~ 376 (513)
++||||+++|+|.+++.........+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 115 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DFGls~ 191 (496)
T PTZ00283 115 ALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDFGFSK 191 (496)
T ss_pred EEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEecccCe
Confidence 899999999999999976544556799999999999999999999999 99999999999999999999999999998
Q ss_pred cCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccc
Q 010309 377 FVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLE 456 (513)
Q Consensus 377 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (513)
...............||+.|+|||++.+..++.++|||||||++|||++|+.||...+... . ...... ..
T Consensus 192 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~---~---~~~~~~-~~--- 261 (496)
T PTZ00283 192 MYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE---V---MHKTLA-GR--- 261 (496)
T ss_pred eccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH---H---HHHHhc-CC---
Confidence 7643322222223448999999999999999999999999999999999999997643211 1 111000 00
Q ss_pred cccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 457 LLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.. ..+...++++.+++.+||+.||.+||++.++++
T Consensus 262 -~~---------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 262 -YD---------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred -CC---------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 00 111234567999999999999999999999986
No 84
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.3e-40 Score=313.08 Aligned_cols=247 Identities=22% Similarity=0.271 Sum_probs=201.6
Q ss_pred ceecccCceEEEEEEeCC-CCEEEEEEecccchhc---HHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 231 RLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
+.||.|.-|+||++...+ +..+|+|++.+..... ..+.+.|.+||+.++||.++.||..++.+...++|||||+||
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGG 162 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGG 162 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCc
Confidence 367999999999999864 6899999998875443 356778999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc-----
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE----- 381 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~----- 381 (513)
+|..+++. +.++.+++..++.++..|+.||+|||-. |||.|||||+||||.++|++.|+||.++......
T Consensus 163 dL~~Lrqk--Qp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~ 237 (459)
T KOG0610|consen 163 DLHSLRQK--QPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVK 237 (459)
T ss_pred cHHHHHhh--CCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeec
Confidence 99998876 5567899999999999999999999999 9999999999999999999999999998643210
Q ss_pred ---------------------------c-c---------------------ccceeecCcccccccccccccCCCCchhh
Q 010309 382 ---------------------------V-M---------------------QERTVMAGGTYGYLAPEFVYRNELTTKSD 412 (513)
Q Consensus 382 ---------------------------~-~---------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sD 412 (513)
. . ........||-.|.|||++.+...+.+.|
T Consensus 238 s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVD 317 (459)
T KOG0610|consen 238 SSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVD 317 (459)
T ss_pred cCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhh
Confidence 0 0 00011223889999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCC
Q 010309 413 VYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSM 492 (513)
Q Consensus 413 vwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 492 (513)
-|+|||+||||+.|..||.+.+..+ .+.+++...+ ........+..+.+||+++|.+||++
T Consensus 318 WWtfGIflYEmLyG~TPFKG~~~~~---------------Tl~NIv~~~l----~Fp~~~~vs~~akDLIr~LLvKdP~k 378 (459)
T KOG0610|consen 318 WWTFGIFLYEMLYGTTPFKGSNNKE---------------TLRNIVGQPL----KFPEEPEVSSAAKDLIRKLLVKDPSK 378 (459)
T ss_pred HHHHHHHHHHHHhCCCCcCCCCchh---------------hHHHHhcCCC----cCCCCCcchhHHHHHHHHHhccChhh
Confidence 9999999999999999999876531 1111221111 11112256678999999999999999
Q ss_pred CCC----HHHHHH
Q 010309 493 RPR----MSHVVH 501 (513)
Q Consensus 493 RPs----~~evl~ 501 (513)
|.. +.||-+
T Consensus 379 Rlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 379 RLGSKRGAAEIKR 391 (459)
T ss_pred hhccccchHHhhc
Confidence 987 777654
No 85
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=7.5e-41 Score=333.64 Aligned_cols=239 Identities=22% Similarity=0.308 Sum_probs=195.2
Q ss_pred CceecccCceEEEEEEeCC--CCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILPD--GSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
.+.||+|+||.||+|...+ +..||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 35 ~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~ 114 (340)
T PTZ00426 35 IRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVI 114 (340)
T ss_pred EEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCC
Confidence 4567999999999998643 3689999996542 2234568899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 115 ~g~L~~~i~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~-- 185 (340)
T PTZ00426 115 GGEFFTFLRR----NKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT-- 185 (340)
T ss_pred CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCCCc--
Confidence 9999999964 34689999999999999999999999 99999999999999999999999999998654321
Q ss_pred cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 385 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
....||+.|+|||++.+..++.++|||||||++|||++|..||...+.... ...... ...
T Consensus 186 ---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~------~~~i~~---------~~~-- 245 (340)
T PTZ00426 186 ---YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI------YQKILE---------GII-- 245 (340)
T ss_pred ---ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH------HHHHhc---------CCC--
Confidence 123489999999999988899999999999999999999999986543210 000000 000
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRP-----RMSHVVH 501 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 501 (513)
..+...++.+.++|.+||+.||++|+ +++++++
T Consensus 246 ----~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 246 ----YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ----CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 01122345689999999999999995 8888875
No 86
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.7e-40 Score=308.40 Aligned_cols=267 Identities=21% Similarity=0.305 Sum_probs=200.8
Q ss_pred ecccCceEEEEEEe-CCCCEEEEEEecccchh--cHHHHHHHHHHHhhcCCCc-EeeeeeEEeeCC------ceEEEEee
Q 010309 233 LGDSKTGGTYSGIL-PDGSRVAVKRLKRSSFQ--RKKEFYSEIGRFARLHHPN-LVAVKGCCYDHG------DRYIVYEF 302 (513)
Q Consensus 233 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~------~~~lv~e~ 302 (513)
||+|+||+||+|+. .+|+.||+|.++-.... ......+|+.+|+.|+|+| |+.+++++...+ ..++|+||
T Consensus 19 lGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~ 98 (323)
T KOG0594|consen 19 LGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEF 98 (323)
T ss_pred hCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEe
Confidence 69999999999996 46899999999765332 3456789999999999999 999999999887 78999999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~ 382 (513)
+ .-+|..++.........++...+..++.||+.||+|||++ +|+||||||+||||+++|.+||+|||+|+......
T Consensus 99 ~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~ 174 (323)
T KOG0594|consen 99 L-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLARAFSIPM 174 (323)
T ss_pred e-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchHHHhcCCc
Confidence 9 5699999987554335678899999999999999999999 99999999999999999999999999999765332
Q ss_pred cccceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccch-hHHhhhHHhhccccccccc-
Q 010309 383 MQERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQS-IFEWATPLVQSHRYLELLD- 459 (513)
Q Consensus 383 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~- 459 (513)
... ....+|..|.|||++.+. .|+...||||+|||+.||+++++.|.+..+..... +++.. .......+.....
T Consensus 175 ~~y--t~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~l-GtP~e~~Wp~v~~~ 251 (323)
T KOG0594|consen 175 RTY--TPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLL-GTPNEKDWPGVSSL 251 (323)
T ss_pred ccc--cccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHc-CCCCccCCCCcccc
Confidence 221 122278899999999986 78999999999999999999999998876532111 11110 0001111111000
Q ss_pred cccc-CCCCCCCc-------HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--HhcC
Q 010309 460 PLIS-SLSSDIPE-------AGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ--LQQL 506 (513)
Q Consensus 460 ~~~~-~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~ 506 (513)
+... .......+ ....+...+++.+||+.+|.+|.|++.+++. +..+
T Consensus 252 ~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 252 PDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred ccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 0000 00000000 0112478899999999999999999999975 4444
No 87
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.7e-40 Score=320.89 Aligned_cols=254 Identities=23% Similarity=0.396 Sum_probs=198.6
Q ss_pred CCceecccCceEEEEEEeC------CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEe
Q 010309 229 GNRLLGDSKTGGTYSGILP------DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYE 301 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 301 (513)
..+.||+|++|.||+|... .+..||||++.... .....++.+|+.+++.++||||+++++++.+....++|||
T Consensus 10 ~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e 89 (277)
T cd05062 10 MSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 89 (277)
T ss_pred eeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEe
Confidence 3456799999999999853 25679999986542 2344678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCC------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccccc
Q 010309 302 FVVNGPLDRWLHHIPRG------GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLS 375 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~ 375 (513)
|+++++|.+++...... ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l~dfg~~ 166 (277)
T cd05062 90 LMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 166 (277)
T ss_pred cCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEECCCCCc
Confidence 99999999998653211 23467888999999999999999999 9999999999999999999999999998
Q ss_pred ccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccc
Q 010309 376 KFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRY 454 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (513)
................+++.|+|||++.+..++.++||||||+++|||++ |..||....... ... .......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~---~~~----~~~~~~~ 239 (277)
T cd05062 167 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ---VLR----FVMEGGL 239 (277)
T ss_pred cccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH----HHHcCCc
Confidence 76543222111111225778999999998889999999999999999999 788887654321 111 0111100
Q ss_pred cccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 455 LELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
. ..+...+..+.+++.+||+.||++|||+.|+++.|++
T Consensus 240 ~-------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 240 L-------------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred C-------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 0 0011234579999999999999999999999998864
No 88
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1e-40 Score=330.40 Aligned_cols=235 Identities=28% Similarity=0.366 Sum_probs=190.4
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
+||+|+||.||+|... +++.||||++.+.. ....+.+..|..++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 5799999999999975 58899999997542 22345677888888876 7999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.........
T Consensus 82 ~L~~~i~~----~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~-- 152 (320)
T cd05590 82 DLMFHIQK----SRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT-- 152 (320)
T ss_pred hHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc--
Confidence 99998854 34689999999999999999999999 9999999999999999999999999998754322111
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+... +.. ... ...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~---~~~---~i~-~~~------------- 212 (320)
T cd05590 153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD---LFE---AIL-NDE------------- 212 (320)
T ss_pred ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH---HHH---HHh-cCC-------------
Confidence 112348999999999998899999999999999999999999997654321 111 000 000
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRM 496 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 496 (513)
...+...+.++.+++.+||+.||++||++
T Consensus 213 -~~~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 213 -VVYPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred -CCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 00111245678999999999999999998
No 89
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.8e-40 Score=317.83 Aligned_cols=252 Identities=25% Similarity=0.403 Sum_probs=201.8
Q ss_pred CCceecccCceEEEEEEeCC----CCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 229 GNRLLGDSKTGGTYSGILPD----GSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
..+.||+|+||.||+|.+.. ...||||.++... ......+.+|+.++++++||||+++++.+...+..++||||+
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 87 (266)
T cd05033 8 IEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYM 87 (266)
T ss_pred eeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcC
Confidence 34577999999999999743 4589999987543 233567889999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
++++|.+++... ...+++..++.++.|++.||+|||+. +|+|+||||+|||++.++.++|+|||++........
T Consensus 88 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd05033 88 ENGSLDKFLREN---DGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA 161 (266)
T ss_pred CCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccccccc
Confidence 999999998642 24689999999999999999999999 999999999999999999999999999987752221
Q ss_pred ccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 384 QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
........++..|+|||.+.+..++.++||||||+++|+|++ |..||....... .... .....
T Consensus 162 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~---~~~~----~~~~~--------- 225 (266)
T cd05033 162 TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD---VIKA----VEDGY--------- 225 (266)
T ss_pred ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH---HHHH----HHcCC---------
Confidence 111112225678999999998899999999999999999998 999986543221 1110 00000
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
....+...++.+.+++.+||+.+|++||++++|++.|+++
T Consensus 226 ----~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 226 ----RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0001123456799999999999999999999999999875
No 90
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4e-40 Score=315.83 Aligned_cols=246 Identities=27% Similarity=0.447 Sum_probs=198.5
Q ss_pred ceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHH
Q 010309 231 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 310 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 310 (513)
+.||+|++|.||+|...++..||||.+.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+.+++|.+
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~ 88 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLN 88 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHH
Confidence 4579999999999998777789999987543 345678999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeec
Q 010309 311 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 390 (513)
Q Consensus 311 ~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 390 (513)
++... ...+++..++.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||.++.......... ...
T Consensus 89 ~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~-~~~ 161 (256)
T cd05113 89 YLREH---GKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS-VGS 161 (256)
T ss_pred HHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCceeec-CCC
Confidence 98642 23689999999999999999999999 999999999999999999999999999886543322111 111
Q ss_pred CcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCC
Q 010309 391 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDI 469 (513)
Q Consensus 391 ~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (513)
.++..|+|||++.+..++.++||||||+++|+|++ |..||....... ... ....... . .
T Consensus 162 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~---~~~~~~~------~--------~ 221 (256)
T cd05113 162 KFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE---TVE---KVSQGLR------L--------Y 221 (256)
T ss_pred ccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHH---HHhcCCC------C--------C
Confidence 25678999999988889999999999999999999 999987544321 111 1000000 0 0
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 470 PEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 470 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
.+...+..+.+++.+||+.||.+||++.+|++.|+
T Consensus 222 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 222 RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 01123467999999999999999999999998874
No 91
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=8e-41 Score=331.54 Aligned_cols=240 Identities=25% Similarity=0.333 Sum_probs=193.3
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
+||+|+||.||+|... +++.||||++++.. ....+.+..|.+++..+ +||||+++++++.+.+..++||||++++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 5799999999999975 47899999997642 22345577888888876 8999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|..++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++.........
T Consensus 82 ~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~-- 152 (321)
T cd05591 82 DLMFQIQR----SRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT-- 152 (321)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCcc--
Confidence 99988854 34689999999999999999999999 9999999999999999999999999998754322211
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||...+... ... .... . +
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~---~~~---~i~~-~---~---------- 212 (321)
T cd05591 153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD---LFE---SILH-D---D---------- 212 (321)
T ss_pred ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH---HHH---HHHc-C---C----------
Confidence 112338999999999998899999999999999999999999998654321 111 1000 0 0
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCC-------CHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRP-------RMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-------s~~evl~ 501 (513)
...+...+.++.+++.+||+.||++|| +++++++
T Consensus 213 -~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 213 -VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred -CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 001112356789999999999999999 7777764
No 92
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.2e-40 Score=329.39 Aligned_cols=248 Identities=23% Similarity=0.294 Sum_probs=194.1
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
++||+|+||.||++... +++.||||++++... ...+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36899999999999975 588999999986422 2345678899999998 799999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++........
T Consensus 81 g~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~-- 151 (329)
T cd05588 81 GDLMFHMQR----QRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD-- 151 (329)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCC--
Confidence 999988853 35699999999999999999999999 999999999999999999999999999875322111
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccc--cchhHHhhhHHhhccccccccccccc
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVC--WQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....++........ ..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--------~~- 222 (329)
T cd05588 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--------QI- 222 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--------CC-
Confidence 1122348999999999999999999999999999999999999996432211 011111111111100 00
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCC------HHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPR------MSHVVH 501 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~evl~ 501 (513)
. .+...+.++.+++.+||+.||.+||+ ++++++
T Consensus 223 ----~-~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 223 ----R-IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred ----C-CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 0 11224567899999999999999997 566653
No 93
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=4e-40 Score=321.84 Aligned_cols=262 Identities=21% Similarity=0.281 Sum_probs=190.8
Q ss_pred CceecccCceEEEEEEeC--CCCEEEEEEecccch--hcHHHHHHHHHHHhhc---CCCcEeeeeeEEee-----CCceE
Q 010309 230 NRLLGDSKTGGTYSGILP--DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARL---HHPNLVAVKGCCYD-----HGDRY 297 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~-----~~~~~ 297 (513)
.+.||+|+||.||+|... +++.||||+++.... .....+.+|+.+++.+ +||||+++++++.. ....+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~ 85 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 85 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEE
Confidence 456799999999999863 468899999875422 2234566777777665 69999999999852 45689
Q ss_pred EEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccccccc
Q 010309 298 IVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF 377 (513)
Q Consensus 298 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~ 377 (513)
+||||++ ++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++..
T Consensus 86 lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 86 LVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred EEEccCC-CCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 9999995 6899988652 234589999999999999999999999 999999999999999999999999999986
Q ss_pred CCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccc-hhHHhhhHHhhcccccc
Q 010309 378 VPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQ-SIFEWATPLVQSHRYLE 456 (513)
Q Consensus 378 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 456 (513)
...... .....||+.|+|||++.+..++.++|||||||++|||++|++||.+....... .+.+.... ........
T Consensus 160 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~-~~~~~~~~ 235 (290)
T cd07862 160 YSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL-PGEEDWPR 235 (290)
T ss_pred ccCCcc---cccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCC-CChhhchh
Confidence 543321 11223899999999998888999999999999999999999999876542211 11110000 00000000
Q ss_pred ---cccccccCCCCCC---CcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 457 ---LLDPLISSLSSDI---PEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 457 ---~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
............. .....++.+.+|+.+||+.||++|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 236 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0000000000000 00124567889999999999999999999985
No 94
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.9e-40 Score=321.94 Aligned_cols=257 Identities=25% Similarity=0.414 Sum_probs=203.5
Q ss_pred CceecccCceEEEEEEeC------CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 230 NRLLGDSKTGGTYSGILP------DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
.+.||+|+||.||+|... ....+|+|.+.... ......+.+|+.+++.++||||+++++.+...+..++|+||
T Consensus 5 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (290)
T cd05045 5 GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEY 84 (290)
T ss_pred cccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEe
Confidence 456799999999999853 23579999887553 23346789999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCC--------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEec
Q 010309 303 VVNGPLDRWLHHIPR--------------------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 362 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~ 362 (513)
+.+++|.+++..... ....+++..++.++.|++.||.|||+. +++||||||+|||++
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~nill~ 161 (290)
T cd05045 85 AKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARNVLVA 161 (290)
T ss_pred cCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---CeehhhhhhheEEEc
Confidence 999999999864221 124588999999999999999999999 999999999999999
Q ss_pred CCCCeEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchh
Q 010309 363 EEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSI 441 (513)
Q Consensus 363 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~ 441 (513)
+++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||....... +
T Consensus 162 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~ 238 (290)
T cd05045 162 EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER---L 238 (290)
T ss_pred CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH---H
Confidence 999999999999986543322111222235678999999988889999999999999999998 999987654321 1
Q ss_pred HHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCC
Q 010309 442 FEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQP 509 (513)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 509 (513)
.... ... . ....+...+.++.+++.+||+.+|++||++.++++.|+++..+
T Consensus 239 ~~~~----~~~---------~----~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 239 FNLL----KTG---------Y----RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred HHHH----hCC---------C----CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 1111 000 0 0001123456799999999999999999999999999987654
No 95
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5e-40 Score=319.98 Aligned_cols=253 Identities=27% Similarity=0.435 Sum_probs=199.7
Q ss_pred CceecccCceEEEEEEe-----CCCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 230 NRLLGDSKTGGTYSGIL-----PDGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
.+.||+|+||.||+|.. .++..||+|.+.... ......+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 89 (283)
T cd05090 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYL 89 (283)
T ss_pred eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcC
Confidence 35679999999999984 246789999997543 233467889999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEe
Q 010309 304 VNGPLDRWLHHIPR-------------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM 370 (513)
Q Consensus 304 ~~gsL~~~l~~~~~-------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 370 (513)
++++|.+++..... ....+++..++.++.|++.||+|||++ +++|+||||+|||++.++.+||+
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~~~kl~ 166 (283)
T cd05090 90 NQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQLHVKIS 166 (283)
T ss_pred CCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCCcEEec
Confidence 99999999853211 123578899999999999999999999 99999999999999999999999
Q ss_pred cccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHh
Q 010309 371 GVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLV 449 (513)
Q Consensus 371 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 449 (513)
|||++................++..|+|||++.+..++.++||||||+++|||++ |..||....... ..+ ..
T Consensus 167 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~---~~~----~~ 239 (283)
T cd05090 167 DLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE---VIE----MV 239 (283)
T ss_pred cccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHH----HH
Confidence 9999986543322211222225678999999988889999999999999999999 999987643211 111 11
Q ss_pred hcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 450 QSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
..... + ..+..+++.+.+++.+||+.||++||++.+|++.|..
T Consensus 240 ~~~~~-------~------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 240 RKRQL-------L------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HcCCc-------C------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11000 0 0112245679999999999999999999999998864
No 96
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=4.3e-40 Score=317.50 Aligned_cols=256 Identities=23% Similarity=0.361 Sum_probs=206.5
Q ss_pred CceecccCceEEEEEEe-CCCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|++|.||++.. .+++.+|||.+.... .....++.+|+.+++.++||||+++++++.+++..+++|||+++
T Consensus 7 ~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~ 86 (267)
T cd08229 7 EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 86 (267)
T ss_pred hhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCC
Confidence 45679999999999995 478999999886532 23346788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
++|.+++.........+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++..........
T Consensus 87 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (267)
T cd08229 87 GDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 163 (267)
T ss_pred CCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhccccCCccc
Confidence 999999875444456789999999999999999999999 99999999999999999999999999987664332211
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
....++..|+|||.+.+..++.++||||||+++|+|++|..||....... ....... ....
T Consensus 164 --~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~------~~~~------- 224 (267)
T cd08229 164 --HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL----YSLCKKI------EQCD------- 224 (267)
T ss_pred --ccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchH----HHHhhhh------hcCC-------
Confidence 12237889999999988889999999999999999999999986543210 0100000 0000
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
....+....++.+.+++.+||+.||++|||+.+|++.++++.
T Consensus 225 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 225 YPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred CCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 011222346678999999999999999999999999998764
No 97
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-41 Score=332.83 Aligned_cols=252 Identities=29% Similarity=0.456 Sum_probs=212.4
Q ss_pred ceecccCceEEEEEEeCC-CCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHH
Q 010309 231 RLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 309 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 309 (513)
..||-|.||.||.|+++. .-.||||.++.+. ...++|+.|+.+|+.++|||+|+|+|+|..+..+|||+|||..|+|.
T Consensus 273 hKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLL 351 (1157)
T KOG4278|consen 273 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLL 351 (1157)
T ss_pred eccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHH
Confidence 346999999999999865 6789999998764 56789999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceee
Q 010309 310 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 389 (513)
Q Consensus 310 ~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 389 (513)
+||+... +..++.-..+.++.||++||.||..+ ++|||||.++|+|+.++..+|++|||+++++..+.......
T Consensus 352 dYLRecn--r~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAG- 425 (1157)
T KOG4278|consen 352 DYLRECN--RSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAG- 425 (1157)
T ss_pred HHHHHhc--hhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccC-
Confidence 9998743 45677888899999999999999999 99999999999999999999999999999987654433222
Q ss_pred cCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 390 AGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 390 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
..-.+.|.|||.+....++.|+|||+|||+|||+.| |..||.+.+-. +. ..+.+.+- .-
T Consensus 426 AKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS---qV----Y~LLEkgy-------------RM 485 (1157)
T KOG4278|consen 426 AKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QV----YGLLEKGY-------------RM 485 (1157)
T ss_pred ccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH---HH----HHHHhccc-------------cc
Confidence 224678999999999999999999999999999998 99999876532 11 11111111 11
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCC
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQP 509 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 509 (513)
..+.++++.+.+||+.||+.+|.+||++.|+-+.++.+...
T Consensus 486 ~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 486 DGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred cCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 12346788899999999999999999999999999877543
No 98
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.2e-40 Score=327.49 Aligned_cols=239 Identities=23% Similarity=0.294 Sum_probs=190.2
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.||+|+||.||+|... +++.||||+++... ....+.+..|..++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 5799999999999975 58899999997642 12334556677777654 8999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|..++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++........ .
T Consensus 82 ~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~--~ 152 (316)
T cd05592 82 DLMFHIQS----SGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG--K 152 (316)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC--c
Confidence 99998864 34689999999999999999999999 999999999999999999999999999975432221 1
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+... +.. .... . .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~---~~~---~i~~-~------~------- 212 (316)
T cd05592 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE---LFD---SILN-D------R------- 212 (316)
T ss_pred cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH---HHH---HHHc-C------C-------
Confidence 122348999999999998899999999999999999999999998654321 111 0000 0 0
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHH-HHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMS-HVV 500 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 500 (513)
. ..+...+.++.+++.+||+.||++||++. +++
T Consensus 213 ~-~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 213 P-HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred C-CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0 01122456789999999999999999875 454
No 99
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.8e-40 Score=324.12 Aligned_cols=261 Identities=18% Similarity=0.258 Sum_probs=193.1
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.+.||+|+||.||+|... +++.||||++..... .....+.+|+.+++.++||||+++++++.+.+..++||||++ ++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~ 88 (303)
T cd07869 10 LEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TD 88 (303)
T ss_pred eeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cC
Confidence 456799999999999975 689999999975432 223567889999999999999999999999999999999995 68
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......... .
T Consensus 89 l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~ 160 (303)
T cd07869 89 LCQYMDK---HPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHT--Y 160 (303)
T ss_pred HHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCCcc--C
Confidence 8877753 234588999999999999999999999 9999999999999999999999999998754322111 1
Q ss_pred eecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcc---cccc-----cc
Q 010309 388 VMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSH---RYLE-----LL 458 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~ 458 (513)
....+++.|+|||++.+ ..++.++|||||||++|||++|..||.+.... .............. .... ..
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (303)
T cd07869 161 SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI--QDQLERIFLVLGTPNEDTWPGVHSLPHF 238 (303)
T ss_pred CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH--HHHHHHHHHHhCCCChhhccchhhcccc
Confidence 12237899999999865 45788999999999999999999999865432 11111110000000 0000 00
Q ss_pred cc-cccCCCCCC-----CcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 459 DP-LISSLSSDI-----PEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 459 ~~-~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.+ ......... .....+..+.+|+.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 239 KPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00 000000000 00012356889999999999999999999986
No 100
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.9e-40 Score=320.73 Aligned_cols=270 Identities=28% Similarity=0.392 Sum_probs=203.0
Q ss_pred CcccCCceecccCceEEEEEEe-----CCCCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--Cce
Q 010309 225 NFSEGNRLLGDSKTGGTYSGIL-----PDGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDH--GDR 296 (513)
Q Consensus 225 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 296 (513)
+++...+.||+|+||.||++.. .++..||+|.++.... .....+.+|++++++++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 4445566789999999988653 3578999999976532 3456788999999999999999999987754 357
Q ss_pred EEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccc
Q 010309 297 YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK 376 (513)
Q Consensus 297 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~ 376 (513)
++||||+++++|.+++.. ..+++.++..++.|++.||.|||+. +++||||||+|||++.++.++|+|||++.
T Consensus 84 ~lv~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~ 155 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 155 (283)
T ss_pred EEEecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccc
Confidence 899999999999999864 3599999999999999999999999 99999999999999999999999999998
Q ss_pred cCCccccccc-eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccc
Q 010309 377 FVPWEVMQER-TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYL 455 (513)
Q Consensus 377 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (513)
.......... .....++..|+|||.+.+..++.++||||||+++|||+||..|+...... ..................
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05080 156 AVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK-FEEMIGPKQGQMTVVRLI 234 (283)
T ss_pred ccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch-hhhhhcccccccchhhhh
Confidence 7653322111 11122566799999998888999999999999999999999998654321 111111000000000111
Q ss_pred ccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 456 ELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
+.++... ....+...+.++.+++.+||+.||++|||+++|++.|+++.
T Consensus 235 ~~~~~~~----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 235 ELLERGM----RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhcCC----CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1111111 00112234567999999999999999999999999998764
No 101
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.6e-40 Score=331.18 Aligned_cols=242 Identities=24% Similarity=0.376 Sum_probs=190.1
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
+.||+|+||.||+|... +++.||||++.... ......+.+|+++++.++|+||+++++++...+..++||||+++++|
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 159 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSL 159 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcc
Confidence 45799999999999965 68999999996543 23346789999999999999999999999999999999999999998
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+. ...++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++......... ..
T Consensus 160 ~~~--------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~--~~ 226 (353)
T PLN00034 160 EGT--------HIADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP--CN 226 (353)
T ss_pred ccc--------ccCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccccc--cc
Confidence 643 2356778889999999999999999 9999999999999999999999999999866432211 11
Q ss_pred ecCccccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 389 MAGGTYGYLAPEFVYR-----NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
...||..|+|||++.. ...+.++|||||||++|||++|+.||.......+..+.... .. ..
T Consensus 227 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~---~~-~~---------- 292 (353)
T PLN00034 227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI---CM-SQ---------- 292 (353)
T ss_pred ccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH---hc-cC----------
Confidence 2238999999998743 23356899999999999999999999743332221111100 00 00
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
........+.++.+||.+||+.||++|||+.||++.
T Consensus 293 ---~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 293 ---PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ---CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001112345679999999999999999999999973
No 102
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.1e-40 Score=326.39 Aligned_cols=239 Identities=23% Similarity=0.327 Sum_probs=191.1
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.||+|+||.||+|... +++.||||+++... ......+..|..++..+ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 5799999999999975 47899999997642 12334566777888764 9999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++........ .
T Consensus 82 ~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~ 152 (316)
T cd05619 82 DLMFHIQS----CHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA--K 152 (316)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC--c
Confidence 99999864 34688999999999999999999999 999999999999999999999999999875322211 1
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....||+.|+|||++.+..++.++|||||||++|||++|..||...+... +.... ... .+.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~~~i----~~~------~~~----- 214 (316)
T cd05619 153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE---LFQSI----RMD------NPC----- 214 (316)
T ss_pred eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH---HHHHH----HhC------CCC-----
Confidence 112338999999999998899999999999999999999999997654321 11110 000 000
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHH-HHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMS-HVV 500 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 500 (513)
.+...+.++.+++.+||+.||++||++. +++
T Consensus 215 ---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 215 ---YPRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred ---CCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 1112455789999999999999999997 554
No 103
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.9e-40 Score=315.23 Aligned_cols=247 Identities=24% Similarity=0.401 Sum_probs=198.5
Q ss_pred CceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHH
Q 010309 230 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 309 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 309 (513)
.+.||+|++|.||++..+++..+|+|.+.... .....+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 9 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 87 (256)
T cd05059 9 LKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLL 87 (256)
T ss_pred hhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHH
Confidence 44679999999999998777899999986543 34467889999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceee
Q 010309 310 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 389 (513)
Q Consensus 310 ~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 389 (513)
+++... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.......... ..
T Consensus 88 ~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~-~~ 160 (256)
T cd05059 88 NYLRER---KGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSS-QG 160 (256)
T ss_pred HHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccccccc-CC
Confidence 998642 23689999999999999999999999 999999999999999999999999999876543221111 11
Q ss_pred cCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 390 AGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 390 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
..++..|+|||.+.+..++.++||||||+++|||++ |..||...+... ... .... ....
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~---~~~~------~~~~-------- 220 (256)
T cd05059 161 TKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE---VVE---SVSA------GYRL-------- 220 (256)
T ss_pred CCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH---HHH---HHHc------CCcC--------
Confidence 114457999999998899999999999999999999 899987644321 110 1000 0000
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
..+...+.++.+++.+||+.+|++|||+.++++.|.
T Consensus 221 ~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 221 YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 011124567999999999999999999999999873
No 104
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=6.9e-40 Score=316.95 Aligned_cols=254 Identities=26% Similarity=0.425 Sum_probs=197.5
Q ss_pred CceecccCceEEEEEEeCC-CC--EEEEEEeccc--chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC------CceEE
Q 010309 230 NRLLGDSKTGGTYSGILPD-GS--RVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH------GDRYI 298 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~~~l 298 (513)
.+.||+|+||.||+|...+ +. .||+|.++.. .....+.+.+|+.+++.++||||+++++++... ...++
T Consensus 4 ~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 83 (272)
T cd05075 4 GKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVV 83 (272)
T ss_pred ccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEE
Confidence 4568999999999999754 33 6999998754 233456788999999999999999999987532 24689
Q ss_pred EEeeccCCCHHHHhccCC--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccc
Q 010309 299 VYEFVVNGPLDRWLHHIP--RGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK 376 (513)
Q Consensus 299 v~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~ 376 (513)
+|||+++|+|.+++.... .....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 84 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 84 ILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred EEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCccc
Confidence 999999999999874321 2234589999999999999999999999 99999999999999999999999999998
Q ss_pred cCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhccccc
Q 010309 377 FVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYL 455 (513)
Q Consensus 377 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (513)
...............+++.|+|||.+.+..++.++||||||+++|||++ |..||....... .... ......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~~----~~~~~~- 232 (272)
T cd05075 161 KIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE---IYDY----LRQGNR- 232 (272)
T ss_pred ccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH----HHcCCC-
Confidence 7643322111122236778999999998889999999999999999999 889987643321 1110 111000
Q ss_pred ccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 456 ELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
. ..+...+..+.+++.+||+.||++|||+.+|++.|+++
T Consensus 233 ------~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 233 ------L------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ------C------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 01112445689999999999999999999999999875
No 105
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.5e-40 Score=327.49 Aligned_cols=240 Identities=23% Similarity=0.313 Sum_probs=194.1
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
+||+|+||.||++... +++.||||++++.. ......+.+|..++..+ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 5799999999999975 47899999998642 22345677888999888 7999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|..++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.........
T Consensus 82 ~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-- 152 (318)
T cd05570 82 DLMFHIQR----SGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT-- 152 (318)
T ss_pred CHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCc--
Confidence 99988854 24699999999999999999999999 9999999999999999999999999998753222111
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....|++.|+|||++.+..++.++|||||||++|+|++|+.||...+... ... .... ..
T Consensus 153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~---~~~---~i~~-~~------------- 212 (318)
T cd05570 153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE---LFQ---SILE-DE------------- 212 (318)
T ss_pred ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH---HHH---HHHc-CC-------------
Confidence 112238999999999999999999999999999999999999997654321 111 0000 00
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRM-----SHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 501 (513)
...+...+..+.+||.+||+.||++||++ .++++
T Consensus 213 -~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 213 -VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred -CCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 00112245678999999999999999999 77765
No 106
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=7.3e-40 Score=312.73 Aligned_cols=246 Identities=28% Similarity=0.391 Sum_probs=198.6
Q ss_pred eecccCceEEEEEEeCCCCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHH
Q 010309 232 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 310 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 310 (513)
+||+|+||.||+|...+++.||+|.+..... .....+.+|+.+++.++||||+++++++...+..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 5799999999999988899999999876532 234568899999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeec
Q 010309 311 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 390 (513)
Q Consensus 311 ~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 390 (513)
++... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++........... ...
T Consensus 82 ~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~-~~~ 154 (250)
T cd05085 82 FLRKK---KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSS-GLK 154 (250)
T ss_pred HHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccC-CCC
Confidence 98642 24588999999999999999999999 999999999999999999999999999875433221111 111
Q ss_pred CcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCC
Q 010309 391 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDI 469 (513)
Q Consensus 391 ~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (513)
.++..|+|||++.+..++.++||||||+++|++++ |..||....... .. ...... .. . .
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~---~~----~~~~~~-----~~-------~-~ 214 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ---AR----EQVEKG-----YR-------M-S 214 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH---HH----HHHHcC-----CC-------C-C
Confidence 24677999999988889999999999999999998 999997653321 10 001000 00 0 0
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 470 PEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 470 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
.+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 215 CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 01124567999999999999999999999999885
No 107
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.3e-40 Score=328.06 Aligned_cols=243 Identities=22% Similarity=0.285 Sum_probs=190.5
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
++||+|+||.||++... +++.||+|++++.. ......+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36899999999999965 58899999998642 22345677888888877 899999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|..++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~- 152 (329)
T cd05618 81 GDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT- 152 (329)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc-
Confidence 999988853 35689999999999999999999999 9999999999999999999999999998754222111
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccc--cchhHHhhhHHhhccccccccccccc
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVC--WQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||....... ......+.........
T Consensus 153 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~---------- 221 (329)
T cd05618 153 -TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ---------- 221 (329)
T ss_pred -cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC----------
Confidence 112348999999999999999999999999999999999999996422111 0111111111111100
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRM 496 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 496 (513)
. ..+...+..+.+++.+||+.||++||++
T Consensus 222 ---~-~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 222 ---I-RIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred ---C-CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 0 0112345678999999999999999984
No 108
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.4e-40 Score=327.29 Aligned_cols=239 Identities=25% Similarity=0.314 Sum_probs=191.3
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
+||+|+||.||+|... +|+.||+|.++... ......+..|..++..+ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 5899999999999975 58899999997642 12345567788888765 8999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|..++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.++|+|||++........ .
T Consensus 82 ~L~~~i~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~ 152 (316)
T cd05620 82 DLMFHIQD----KGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN--R 152 (316)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC--c
Confidence 99998854 34689999999999999999999999 999999999999999999999999999874322111 1
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....||+.|+|||++.+..++.++|||||||++|||++|..||...+... +.+... .. .+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~---~~~~~~----~~------~~------ 213 (316)
T cd05620 153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE---LFESIR----VD------TP------ 213 (316)
T ss_pred eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHHHHH----hC------CC------
Confidence 122348999999999999999999999999999999999999997654321 111100 00 00
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHH-HHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMS-HVV 500 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 500 (513)
. .+...+.++.+++.+||+.||++||++. +++
T Consensus 214 -~-~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 214 -H-YPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred -C-CCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0 0112455789999999999999999984 554
No 109
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.5e-40 Score=327.39 Aligned_cols=241 Identities=24% Similarity=0.301 Sum_probs=190.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHH---hhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRF---ARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
.+.||+|+||.||+|... +++.||||++++.. ....+.+.+|..++ +.++||||+++++++.+.+..|+||||
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~ 83 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEY 83 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcC
Confidence 356899999999999864 58999999997542 22234566676555 566899999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~ 382 (513)
+++++|..++.. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 84 AAGGDLMMHIHT-----DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred CCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC
Confidence 999999988753 4699999999999999999999999 99999999999999999999999999987533221
Q ss_pred cccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 383 MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 383 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
. ......|++.|+|||++.+..++.++|||||||++|||++|+.||...+.... . ..... ..
T Consensus 156 ~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~---~---~~i~~-~~--------- 217 (324)
T cd05589 156 D--RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV---F---DSIVN-DE--------- 217 (324)
T ss_pred C--cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH---H---HHHHh-CC---------
Confidence 1 11223489999999999998999999999999999999999999976543211 1 00000 00
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRP-----RMSHVVH 501 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 501 (513)
...+...+..+.++|.+||+.||.+|| ++.++++
T Consensus 218 -----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 218 -----VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -----CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 001122456789999999999999999 5666655
No 110
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=6.1e-40 Score=318.70 Aligned_cols=254 Identities=22% Similarity=0.314 Sum_probs=198.1
Q ss_pred CceecccCceEEEEEEeC-CCC----EEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 230 NRLLGDSKTGGTYSGILP-DGS----RVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
.+.||+|+||.||+|.+. +++ +|++|.+..... ....++..|+..+++++||||+++++++. ....++++||+
T Consensus 12 ~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~ 90 (279)
T cd05111 12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLS 90 (279)
T ss_pred ccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeC
Confidence 346799999999999963 344 578888764422 23356788888999999999999999875 45678999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
++|+|.+++... ...+++..+..++.||+.||+|||+. +++|+||||+|||++.++.+||+|||+++.......
T Consensus 91 ~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T cd05111 91 PLGSLLDHVRQH---RDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK 164 (279)
T ss_pred CCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceeccCCCc
Confidence 999999999642 34689999999999999999999999 999999999999999999999999999986543322
Q ss_pred ccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 384 QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
........++..|+|||.+.+..++.++||||||+++|||++ |..||.+........+ ....... .
T Consensus 165 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~-------~~~~~~~--~---- 231 (279)
T cd05111 165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL-------LEKGERL--A---- 231 (279)
T ss_pred ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-------HHCCCcC--C----
Confidence 211222336778999999998899999999999999999998 9999976543211111 1111000 0
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCCC
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQPP 510 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 510 (513)
.+..++..+.+++.+||..||++|||+.|+++.|..+...|
T Consensus 232 -------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 232 -------QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred -------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 01112346789999999999999999999999998876655
No 111
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=6.7e-40 Score=319.40 Aligned_cols=247 Identities=19% Similarity=0.256 Sum_probs=197.8
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchh---cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ---RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.++||+|+||.||++... +++.||||++...... ....+.+|+.+++.++||||+++++.+..++..++||||+++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 84 (285)
T ss_pred EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCC
Confidence 457899999999999964 6899999999754322 234577899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|.+++.. .....+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||++.........
T Consensus 85 ~~L~~~~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~- 158 (285)
T cd05605 85 GDLKFHIYN--MGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETI- 158 (285)
T ss_pred CcHHHHHHh--cCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcc-
Confidence 999988864 2235689999999999999999999999 9999999999999999999999999999865432211
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
....|++.|+|||++.+..++.++||||||+++|||++|..||.+........ ....... ..
T Consensus 159 --~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~---~~~~~~~---------~~---- 220 (285)
T cd05605 159 --RGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKRE---EVERRVK---------ED---- 220 (285)
T ss_pred --ccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHH---HHHHHhh---------hc----
Confidence 12238899999999998889999999999999999999999998654321100 0000000 00
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRP-----RMSHVVH 501 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 501 (513)
....+...+..+.+|+.+||+.||++|| +++++++
T Consensus 221 -~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 221 -QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred -ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 0111223566789999999999999999 8888865
No 112
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=9e-40 Score=316.17 Aligned_cols=254 Identities=25% Similarity=0.455 Sum_probs=200.0
Q ss_pred CceecccCceEEEEEEeCC----CCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCc------eE
Q 010309 230 NRLLGDSKTGGTYSGILPD----GSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGD------RY 297 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~------~~ 297 (513)
.++||+|+||.||+|.... +..||||.++... ......+.+|+..++.++||||+++++++..... .+
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 83 (273)
T cd05035 4 GKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPM 83 (273)
T ss_pred ccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccE
Confidence 4568999999999998642 3689999997542 2334678999999999999999999998876554 79
Q ss_pred EEEeeccCCCHHHHhccCC--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccccc
Q 010309 298 IVYEFVVNGPLDRWLHHIP--RGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLS 375 (513)
Q Consensus 298 lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~ 375 (513)
+||||+++++|..++.... .....+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||++
T Consensus 84 ~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 84 VILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred EEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCccce
Confidence 9999999999999985432 2234689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccc
Q 010309 376 KFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRY 454 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (513)
+...............++..|+|||.+.+..++.++||||||+++|||++ |..||....... ..+.. .. ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~---~~~~~---~~-~~~ 233 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE---IYDYL---RH-GNR 233 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH---Hc-CCC
Confidence 86644322211222225678999999988889999999999999999999 889986544321 11111 10 000
Q ss_pred cccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 455 LELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
.. .+...+.++.+++.+||+.||++|||+.++++.|+++
T Consensus 234 ------------~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 234 ------------LK-QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ------------CC-CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 1123456799999999999999999999999999875
No 113
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=6.2e-41 Score=331.94 Aligned_cols=238 Identities=26% Similarity=0.324 Sum_probs=192.6
Q ss_pred ceecccCceEEEEEEe----CCCCEEEEEEecccch--hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 231 RLLGDSKTGGTYSGIL----PDGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
+.||+|+||.||++.. .+|+.||+|++..... .....+.+|++++++++||||+++++++.+.+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 3579999999999875 3588999999976432 234567789999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++........
T Consensus 82 ~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~- 153 (318)
T cd05582 82 GGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK- 153 (318)
T ss_pred CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC-
Confidence 9999999854 34689999999999999999999999 999999999999999999999999999876543211
Q ss_pred cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 385 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
......|++.|+|||++.+..++.++||||||+++|||++|+.||...+... .. ..... .. .
T Consensus 154 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---~~---~~i~~-~~--------~-- 215 (318)
T cd05582 154 -KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE---TM---TMILK-AK--------L-- 215 (318)
T ss_pred -ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH---HH---HHHHc-CC--------C--
Confidence 1122348999999999988888999999999999999999999997654321 11 00000 00 0
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSH 498 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 498 (513)
..+...++.+.+|+.+||+.||++||++.+
T Consensus 216 ----~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 ----GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred ----CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 011224567899999999999999999555
No 114
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=327.90 Aligned_cols=253 Identities=28% Similarity=0.442 Sum_probs=211.0
Q ss_pred cCCceecccCceEEEEEEeCC---CC--EEEEEEeccc-chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEe
Q 010309 228 EGNRLLGDSKTGGTYSGILPD---GS--RVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYE 301 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~~---~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 301 (513)
..+++||.|.||.||+|+..+ |. .||||+-+.+ ...+.+.|+.|+.+|++++||||++++|+|.+. ..+||||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmE 470 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVME 470 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEe
Confidence 446789999999999999643 33 5999999874 445578899999999999999999999998764 7799999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
.++-|.|..||+. ....++......++.||+.||+|||+. ++|||||..+|||+.+..-+||+|||+++.+..+
T Consensus 471 L~~~GELr~yLq~---nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 471 LAPLGELREYLQQ---NKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDD 544 (974)
T ss_pred cccchhHHHHHHh---ccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhcccc
Confidence 9999999999974 346799999999999999999999999 9999999999999999999999999999998876
Q ss_pred ccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 382 VMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 382 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
....... ..-++.|||||.+...+++.+||||-|||.+||+++ |..||++....+ ++-.
T Consensus 545 ~yYkaS~-~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD-------------------VI~~ 604 (974)
T KOG4257|consen 545 AYYKASR-GKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD-------------------VIGH 604 (974)
T ss_pred chhhccc-cccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc-------------------eEEE
Confidence 6544442 225788999999999999999999999999999998 999998765421 1111
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcC
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQ 508 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 508 (513)
+........+..+++.+..|+.+||..||.+||.+.++...|..+.+
T Consensus 605 -iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 605 -IENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred -ecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 11111223345678889999999999999999999999998876543
No 115
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=7.9e-40 Score=314.49 Aligned_cols=251 Identities=28% Similarity=0.448 Sum_probs=201.3
Q ss_pred cCCceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 228 EGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
...+.||+|+||.||+|..++++.||+|.+.... .....+.+|+.++++++||||+++++++ ..+..++||||+++++
T Consensus 9 ~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~~~~ 86 (260)
T cd05067 9 KLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGS 86 (260)
T ss_pred eeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCCCCC
Confidence 3345789999999999998889999999997654 3456789999999999999999999986 4567899999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++... ....+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++...........
T Consensus 87 L~~~~~~~--~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~- 160 (260)
T cd05067 87 LVDFLKTP--EGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAR- 160 (260)
T ss_pred HHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccc-
Confidence 99998652 335689999999999999999999999 999999999999999999999999999976653222111
Q ss_pred eecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 388 VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
....++..|+|||++....++.++||||||+++|||++ |+.||...+.... .. .. ... ..
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~~---~~-~~~-----~~------- 221 (260)
T cd05067 161 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEV---IQ---NL-ERG-----YR------- 221 (260)
T ss_pred cCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHH---HH---HH-HcC-----CC-------
Confidence 11225678999999988889999999999999999999 9999976543211 11 00 000 00
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
...+...+.++.+++.+||+.+|++||+++++++.|+.+
T Consensus 222 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 222 -MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 001112345799999999999999999999999999753
No 116
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.4e-40 Score=329.59 Aligned_cols=263 Identities=19% Similarity=0.267 Sum_probs=192.4
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEeccc--chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCC-----ceEEEEe
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG-----DRYIVYE 301 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~lv~e 301 (513)
.+.||+|+||.||+|... +|+.||||++... .......+.+|+.++++++||||+++++++...+ ..|+|||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e 84 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFE 84 (338)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEe
Confidence 457899999999999964 6899999998743 2233456889999999999999999999886432 4799999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
|+ +++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 85 LM-ESDLHQVIKA----NDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred cC-CCCHHHHHHh----cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 99 4689888853 34689999999999999999999999 9999999999999999999999999999865322
Q ss_pred ccc-cceeecCccccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhh--------hHHhh
Q 010309 382 VMQ-ERTVMAGGTYGYLAPEFVYR--NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWA--------TPLVQ 450 (513)
Q Consensus 382 ~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~--------~~~~~ 450 (513)
... .......||+.|+|||++.+ ..++.++|||||||++|||+||++||...+........... ...+.
T Consensus 157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 211 11112338999999999865 67899999999999999999999999765432111100000 00000
Q ss_pred cccccccccccccCCCCCCC---cHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 451 SHRYLELLDPLISSLSSDIP---EAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.......+....... .... ....++.+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 237 NEKARRYLSSMRKKQ-PVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred hhhHHHHHHhhcccC-CCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000000000000000 0000 0123456889999999999999999999986
No 117
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=6.5e-40 Score=325.74 Aligned_cols=242 Identities=21% Similarity=0.259 Sum_probs=191.6
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
+||+|+||.||++... +++.||+|++++... ...+.+.+|..++.++ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 5899999999999965 578999999986532 2345678899999888 6999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|..++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++........ .
T Consensus 82 ~L~~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~--~ 152 (327)
T cd05617 82 DLMFHMQR----QRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD--T 152 (327)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC--c
Confidence 99988853 34699999999999999999999999 999999999999999999999999999875322111 1
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....||+.|+|||++.+..++.++|||||||++|||++|..||............+.........
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------- 218 (327)
T cd05617 153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK-------------- 218 (327)
T ss_pred eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--------------
Confidence 122348999999999999999999999999999999999999997543321111111111111100
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRM 496 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 496 (513)
....+...+..+.+++.+||+.||++||++
T Consensus 219 ~~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 219 PIRIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 001112345678999999999999999985
No 118
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.2e-39 Score=313.21 Aligned_cols=248 Identities=26% Similarity=0.427 Sum_probs=199.1
Q ss_pred CceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHH
Q 010309 230 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 309 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 309 (513)
.+.||+|++|.||+|...++..||+|.+..... ..+.+.+|+.++++++||||+++++++. .+..+++|||+++++|.
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~ 88 (260)
T cd05070 11 IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLL 88 (260)
T ss_pred hheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHH
Confidence 446799999999999988888999999976533 4567899999999999999999999875 45689999999999999
Q ss_pred HHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceee
Q 010309 310 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 389 (513)
Q Consensus 310 ~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 389 (513)
+++... ....+++..++.++.|++.||+|||+. +++|+||||+||++++++.++|+|||++............ .
T Consensus 89 ~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~-~ 162 (260)
T cd05070 89 DFLKDG--EGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQ-G 162 (260)
T ss_pred HHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCccccccc-C
Confidence 998642 234589999999999999999999999 9999999999999999999999999999865433221111 1
Q ss_pred cCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 390 AGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 390 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
..++..|+|||.+.+..++.++||||||+++|+|++ |..||...+... .... ..... ..
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~~---~~~~~--------------~~ 222 (260)
T cd05070 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE---VLEQ---VERGY--------------RM 222 (260)
T ss_pred CCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH---HHHH---HHcCC--------------CC
Confidence 114567999999988889999999999999999999 899987643221 1111 00000 00
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
..+...+..+.+|+.+||+.+|++|||+.++++.|++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0112345679999999999999999999999999875
No 119
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=7.4e-40 Score=321.74 Aligned_cols=255 Identities=25% Similarity=0.360 Sum_probs=201.2
Q ss_pred cCCceecccCceEEEEEEeC------CCCEEEEEEecccc-hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEE
Q 010309 228 EGNRLLGDSKTGGTYSGILP------DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIV 299 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv 299 (513)
...+.||+|+||.||++... .+..||||.++... ....+.+.+|+.+++++ +||||+++++++...+..++|
T Consensus 38 ~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 117 (302)
T cd05055 38 SFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVI 117 (302)
T ss_pred EEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEE
Confidence 34567799999999999741 35589999987653 23346789999999999 799999999999999999999
Q ss_pred EeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCC
Q 010309 300 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVP 379 (513)
Q Consensus 300 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~ 379 (513)
|||+++|+|.+++... ....+++.++..++.|++.||+|||++ +++|+||||+|||++.++.++|+|||++....
T Consensus 118 ~e~~~~~~L~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 192 (302)
T cd05055 118 TEYCCYGDLLNFLRRK--RESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLARDIM 192 (302)
T ss_pred EEcCCCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccccccc
Confidence 9999999999999642 223489999999999999999999999 99999999999999999999999999998654
Q ss_pred ccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccc
Q 010309 380 WEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELL 458 (513)
Q Consensus 380 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (513)
............++..|+|||.+.+..++.++||||||+++|||++ |..||....... ... .......
T Consensus 193 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~--~~~----~~~~~~~----- 261 (302)
T cd05055 193 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS--KFY----KLIKEGY----- 261 (302)
T ss_pred CCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH--HHH----HHHHcCC-----
Confidence 3321111111225678999999998889999999999999999998 999987644311 000 0111000
Q ss_pred cccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 459 DPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
. . ..+...++++.+++.+||+.+|++|||+.+|++.|+++
T Consensus 262 ~-------~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 262 R-------M-AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred c-------C-CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0 0 01112345799999999999999999999999999875
No 120
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.9e-40 Score=331.44 Aligned_cols=265 Identities=16% Similarity=0.180 Sum_probs=195.2
Q ss_pred ccCCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 227 SEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
+...+.||+|+||.||++... +++.||+|... ...+.+|+.++++++||||+++++++......++|+|++ .
T Consensus 94 y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~-~ 166 (391)
T PHA03212 94 FSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY-K 166 (391)
T ss_pred cEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC-C
Confidence 444567899999999999964 58899999753 234678999999999999999999999999999999999 4
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
++|..++.. ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.........
T Consensus 167 ~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~- 238 (391)
T PHA03212 167 TDLYCYLAA----KRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN- 238 (391)
T ss_pred CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccccc-
Confidence 788888854 34689999999999999999999999 9999999999999999999999999999754322111
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcccc-----chhHHhhhHHh---hc------
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCW-----QSIFEWATPLV---QS------ 451 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~-----~~~~~~~~~~~---~~------ 451 (513)
......||+.|+|||++.+..++.++|||||||++|||++|..||...+.... ..+........ ..
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 11123489999999999999999999999999999999999988754322110 00000000000 00
Q ss_pred ccccccc---cccccCCCCCC----CcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH--HHhcC
Q 010309 452 HRYLELL---DPLISSLSSDI----PEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH--QLQQL 506 (513)
Q Consensus 452 ~~~~~~~---~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~ 506 (513)
....... ........... .....+.++.+||.+||+.||++|||++|+++ .+..+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence 0000000 00000000000 01234668999999999999999999999985 44444
No 121
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-40 Score=324.28 Aligned_cols=249 Identities=24% Similarity=0.326 Sum_probs=209.0
Q ss_pred CcccCCceecccCceEEEEEEeCC-CCEEEEEEecccchh---cHHHHHHHHHHHhhcC-CCcEeeeeeEEeeCCceEEE
Q 010309 225 NFSEGNRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQ---RKKEFYSEIGRFARLH-HPNLVAVKGCCYDHGDRYIV 299 (513)
Q Consensus 225 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv 299 (513)
.+++..+.||+|.||.||+++.+. |+.+|+|.+.+.... ....+.+|+.+|+++. |||||.+++++++....++|
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv 114 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV 114 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence 445556788999999999999765 999999999876443 3468999999999998 99999999999999999999
Q ss_pred EeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC----CCeEEeccccc
Q 010309 300 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE----FGAHLMGVGLS 375 (513)
Q Consensus 300 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~----~~~kl~Dfg~~ 375 (513)
||++.||.|.+.+... .+++..+..++.|++.++.|||+. +|+||||||+|+|+... +.+|++|||++
T Consensus 115 mEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 9999999999999753 399999999999999999999999 99999999999999543 47999999999
Q ss_pred ccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccc
Q 010309 376 KFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYL 455 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (513)
..... .......+||+.|+|||++....|+..+||||+|+++|.|++|.+||.+.+...... .+....+
T Consensus 187 ~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-------~i~~~~~- 255 (382)
T KOG0032|consen 187 KFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-------AILRGDF- 255 (382)
T ss_pred eEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------HHHcCCC-
Confidence 98765 223334459999999999999999999999999999999999999998876432111 1111111
Q ss_pred ccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 456 ELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.....+...++..+.++|..||..||.+|+|+.++|+
T Consensus 256 ---------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 256 ---------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred ---------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 0123334557888999999999999999999999997
No 122
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.4e-40 Score=321.37 Aligned_cols=256 Identities=27% Similarity=0.437 Sum_probs=202.6
Q ss_pred CCceecccCceEEEEEEeC------CCCEEEEEEecccc-hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEE
Q 010309 229 GNRLLGDSKTGGTYSGILP------DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVY 300 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~ 300 (513)
..+.||+|++|.||++... ....+|+|.+.... ......+.+|+.++.++ +||||+++++++...+..+++|
T Consensus 16 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~ 95 (293)
T cd05053 16 LGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVV 95 (293)
T ss_pred EeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEE
Confidence 3457899999999999863 23689999987642 23345688999999999 8999999999999999999999
Q ss_pred eeccCCCHHHHhccCC------------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeE
Q 010309 301 EFVVNGPLDRWLHHIP------------RGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 368 (513)
Q Consensus 301 e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~k 368 (513)
||+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+|
T Consensus 96 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~~~~~k 172 (293)
T cd05053 96 EYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTEDHVMK 172 (293)
T ss_pred EeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcCCCeEE
Confidence 9999999999986421 2345689999999999999999999999 999999999999999999999
Q ss_pred EecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhH
Q 010309 369 LMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATP 447 (513)
Q Consensus 369 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 447 (513)
|+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||....... ...
T Consensus 173 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~---- 245 (293)
T cd05053 173 IADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE---LFK---- 245 (293)
T ss_pred eCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH---HHH----
Confidence 999999987654322221222225678999999988889999999999999999998 999987543221 111
Q ss_pred HhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 448 LVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
....... .. .+...+..+.+|+.+||+.||++|||+.++++.|+.+.
T Consensus 246 ~~~~~~~------------~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 246 LLKEGYR------------ME-KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHcCCc------------CC-CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 0100000 00 11123557999999999999999999999999998764
No 123
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.2e-39 Score=312.82 Aligned_cols=250 Identities=30% Similarity=0.456 Sum_probs=204.1
Q ss_pred eecccCceEEEEEEeCC----CCEEEEEEecccchhc-HHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILPD----GSRVAVKRLKRSSFQR-KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.||+|+||.||++.... +..||+|.+....... .+.+.+|+..+..++|+||+++++++.+....++||||++++
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG 81 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence 57999999999999754 8899999998764333 678899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 307 PLDRWLHHIPRG-----GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 307 sL~~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
+|.+++...... ...+++..+..++.|++.||+|||++ +++|+||||+||+++.++.++|+|||.+......
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 999999764221 36799999999999999999999999 9999999999999999999999999999877644
Q ss_pred ccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 382 VMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 382 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
..........++..|+|||.+....++.++||||||+++|||++ |..||...+... +.... .. ..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~---~~-~~------- 224 (262)
T cd00192 159 DYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE---VLEYL---RK-GY------- 224 (262)
T ss_pred cccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHH---Hc-CC-------
Confidence 32111222337889999999988889999999999999999999 699997754321 11111 00 00
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
....+...+.++.+++.+||+.||++|||+.++++.|+
T Consensus 225 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 ------RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ------CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 00111233567999999999999999999999999874
No 124
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.2e-39 Score=312.75 Aligned_cols=247 Identities=26% Similarity=0.380 Sum_probs=196.6
Q ss_pred eecccCceEEEEEEe---CCCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGIL---PDGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.||+|+||.||+|.+ .++..||+|+++... ....+.+.+|+.+++.+.||||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 369999999999975 357899999987543 223567899999999999999999999875 45678999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++...........
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQK----NKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999854 24689999999999999999999999 999999999999999999999999999987654322111
Q ss_pred -eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 387 -TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 387 -~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
.....++..|+|||.+....++.++||||||+++|||++ |..||........... ......
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~-------i~~~~~---------- 216 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQM-------IESGER---------- 216 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-------HHCCCC----------
Confidence 111124578999999988888999999999999999998 9999976543211111 111100
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
.. .+...++++.++|.+||+.||++||++++|.+.|++.
T Consensus 217 --~~-~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 217 --ME-CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred --CC-CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 00 1123456799999999999999999999999999864
No 125
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=9.6e-40 Score=317.29 Aligned_cols=257 Identities=22% Similarity=0.366 Sum_probs=202.0
Q ss_pred cCCceecccCceEEEEEEeC-CCC----EEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEe
Q 010309 228 EGNRLLGDSKTGGTYSGILP-DGS----RVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYE 301 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 301 (513)
+..+.||+|+||.||+|.+. ++. +||+|+++... ......+.+|+.+++.++||||+++++++.. ...++++|
T Consensus 10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~ 88 (279)
T cd05109 10 KKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQ 88 (279)
T ss_pred eeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEE
Confidence 33457899999999999853 444 58999997543 3345678899999999999999999999875 45789999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
|+++|+|.+++... ...+++..++.++.|++.||+|||+. +++||||||+|||++.++.+||+|||+++.....
T Consensus 89 ~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~ 162 (279)
T cd05109 89 LMPYGCLLDYVREN---KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDID 162 (279)
T ss_pred cCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeecccc
Confidence 99999999998642 34689999999999999999999999 9999999999999999999999999999876533
Q ss_pred ccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 382 VMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 382 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
..........+++.|+|||.+.+..++.++||||||+++|||++ |..||....... +.. ......
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~----~~~~~~------- 228 (279)
T cd05109 163 ETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE---IPD----LLEKGE------- 228 (279)
T ss_pred cceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH----HHHCCC-------
Confidence 22211111124678999999988899999999999999999998 899987543211 111 111100
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCCCC
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQPPV 511 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 511 (513)
....+...+..+.+++.+||+.||++||++.++++.|+.+...|.
T Consensus 229 ------~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05109 229 ------RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPS 273 (279)
T ss_pred ------cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCc
Confidence 001112345678999999999999999999999999998877663
No 126
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.4e-39 Score=312.31 Aligned_cols=247 Identities=23% Similarity=0.357 Sum_probs=196.1
Q ss_pred ecccCceEEEEEEeC---CCCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 233 LGDSKTGGTYSGILP---DGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 233 lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
||+|+||.||+|.+. .+..||+|++..... ...+.+.+|+.++++++||||+++++++. .+..++||||+++++|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCH
Confidence 699999999999863 355799999976532 23467899999999999999999999875 4578999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc-e
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER-T 387 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~-~ 387 (513)
.+++.. ....+++..++.++.|++.||+|||++ +++|+||||+|||++.++.+||+|||++........... .
T Consensus 82 ~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05115 82 NKFLSG---KKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR 155 (257)
T ss_pred HHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence 999863 234689999999999999999999999 999999999999999999999999999986543322111 1
Q ss_pred eecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 388 VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
....++..|+|||++....++.++||||||+++|||++ |..||......... .......
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-------~~~~~~~------------- 215 (257)
T cd05115 156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVM-------SFIEQGK------------- 215 (257)
T ss_pred CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHH-------HHHHCCC-------------
Confidence 11123578999999988889999999999999999996 99999765432111 1111110
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
....+...++++.+++.+||+.||++||++.+|.+.|+.+
T Consensus 216 ~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 216 RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 0011123456799999999999999999999999999865
No 127
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9.6e-40 Score=317.95 Aligned_cols=252 Identities=25% Similarity=0.387 Sum_probs=199.1
Q ss_pred ceecccCceEEEEEEeC------CCCEEEEEEecccchh-cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 231 RLLGDSKTGGTYSGILP------DGSRVAVKRLKRSSFQ-RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
+.||+|+||.||+|... ++..||||+++..... ....+.+|+.++..++||||+++++++...+..++++||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~ 90 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYC 90 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcC
Confidence 35699999999999863 2578999999755322 2466889999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCC------------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEec
Q 010309 304 VNGPLDRWLHHIP------------RGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 371 (513)
Q Consensus 304 ~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 371 (513)
.+++|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|
T Consensus 91 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~kl~D 167 (283)
T cd05091 91 SHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLNVKISD 167 (283)
T ss_pred CCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCceEecc
Confidence 9999999985311 1123588889999999999999999999 999999999999999999999999
Q ss_pred ccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhh
Q 010309 372 VGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQ 450 (513)
Q Consensus 372 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 450 (513)
||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |..||.+..... ..+. ..
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~~----i~ 240 (283)
T cd05091 168 LGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD---VIEM----IR 240 (283)
T ss_pred cccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH----HH
Confidence 999886543322221222225778999999988889999999999999999998 888887643321 1111 11
Q ss_pred cccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 451 SHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
... . ...+.+++..+.+|+.+||+.+|.+||++.+|+..|+.
T Consensus 241 ~~~--------~-----~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 241 NRQ--------V-----LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred cCC--------c-----CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 100 0 01122355679999999999999999999999999875
No 128
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.1e-39 Score=317.65 Aligned_cols=267 Identities=25% Similarity=0.378 Sum_probs=198.9
Q ss_pred CceecccCceEEEEEEeC-----CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--CceEEEEee
Q 010309 230 NRLLGDSKTGGTYSGILP-----DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH--GDRYIVYEF 302 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lv~e~ 302 (513)
.+.||+|+||.||++... ++..||+|.+........+.+.+|++++++++||||+++++++... ...++||||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 88 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEY 88 (284)
T ss_pred eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEe
Confidence 356899999999999742 5889999999876655667899999999999999999999987543 467899999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~ 382 (513)
+++++|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 89 ~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 162 (284)
T cd05081 89 LPYGSLRDYLQKH---RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDK 162 (284)
T ss_pred cCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence 9999999998642 24589999999999999999999999 99999999999999999999999999998765332
Q ss_pred cccc-eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccc
Q 010309 383 MQER-TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPL 461 (513)
Q Consensus 383 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (513)
.... .....++..|+|||++.+..++.++||||||+++|||++|..|+.........................+.+.
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 240 (284)
T cd05081 163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK-- 240 (284)
T ss_pred cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHh--
Confidence 2111 1111134569999999888899999999999999999998877543321100000000000000000000000
Q ss_pred ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 462 ISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
.......+...+.++.+|+.+||+.+|++|||+.+|++.|+.+
T Consensus 241 --~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 241 --NNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred --cCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0001111223456799999999999999999999999999876
No 129
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=9.6e-40 Score=317.50 Aligned_cols=253 Identities=24% Similarity=0.363 Sum_probs=200.8
Q ss_pred CceecccCceEEEEEEeC------CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 230 NRLLGDSKTGGTYSGILP------DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
.+.||+|+||.||++... ++..+|+|.+..........+.+|+++++.++||||+++++++...+..++||||+
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 89 (280)
T cd05092 10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYM 89 (280)
T ss_pred ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecC
Confidence 446799999999999742 36689999998776666778999999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecc
Q 010309 304 VNGPLDRWLHHIPR-----------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGV 372 (513)
Q Consensus 304 ~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 372 (513)
++++|.+++..... ....+++..++.++.|++.||+|||+. +++|+||||+|||+++++.+||+||
T Consensus 90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~kL~df 166 (280)
T cd05092 90 RHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVVKIGDF 166 (280)
T ss_pred CCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCEEECCC
Confidence 99999999865321 113588999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhc
Q 010309 373 GLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQS 451 (513)
Q Consensus 373 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 451 (513)
|++................+++.|+|||.+.+..++.++|||||||++|||++ |.+||........ . ... ..
T Consensus 167 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---~---~~~-~~ 239 (280)
T cd05092 167 GMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA---I---ECI-TQ 239 (280)
T ss_pred CceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH---H---HHH-Hc
Confidence 99875543221111111225678999999998899999999999999999998 9999865433211 0 000 00
Q ss_pred ccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 452 HRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
.. ....+..+++.+.+++.+||+.||++||++.+|++.|+.
T Consensus 240 ~~-------------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 240 GR-------------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred Cc-------------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 00 000112345679999999999999999999999999863
No 130
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.1e-40 Score=328.83 Aligned_cols=236 Identities=23% Similarity=0.312 Sum_probs=188.1
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHH-HHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIG-RFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
+||+|+||.||+|... +|+.||||++..... .....+..|.. +++.++||||+++++.+.+.+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 6899999999999975 689999999975422 22344555554 567889999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|..++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++........ .
T Consensus 82 ~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~ 152 (323)
T cd05575 82 ELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK--T 152 (323)
T ss_pred CHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC--c
Confidence 99998854 35689999999999999999999999 999999999999999999999999999875422211 1
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....||+.|+|||++.+..++.++|||||||++|||++|..||...+... +. ..... ...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~---~~---~~i~~---------~~~---- 213 (323)
T cd05575 153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE---MY---DNILN---------KPL---- 213 (323)
T ss_pred cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH---HH---HHHHc---------CCC----
Confidence 122348999999999999999999999999999999999999997654321 11 11100 000
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMS 497 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 497 (513)
. .....+..+.+++.+||+.||.+||++.
T Consensus 214 ~--~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 214 R--LKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred C--CCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 0 0112356799999999999999999985
No 131
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.6e-39 Score=312.83 Aligned_cols=251 Identities=26% Similarity=0.396 Sum_probs=199.7
Q ss_pred cCCceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 228 EGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
...+.||+|++|.||+|...++..||+|.++... ...+.+.+|+.+++.++||||+++++.+. .+..++||||+++++
T Consensus 9 ~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~ 86 (262)
T cd05071 9 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGS 86 (262)
T ss_pred eEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCc
Confidence 3445679999999999998777789999997643 24567899999999999999999999874 456799999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++... ....+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+...........
T Consensus 87 L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~- 160 (262)
T cd05071 87 LLDFLKGE--MGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR- 160 (262)
T ss_pred HHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccccccc-
Confidence 99999642 234578999999999999999999999 999999999999999999999999999976643322111
Q ss_pred eecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 388 VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
....++..|+|||+..+..++.++||||||+++|||+| |..||....... ... .... . .
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~---~~~---~~~~-~-----~-------- 220 (262)
T cd05071 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---VLD---QVER-G-----Y-------- 220 (262)
T ss_pred cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH---HHH---HHhc-C-----C--------
Confidence 11225678999999988889999999999999999999 888887554321 100 0000 0 0
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
........+..+.+++.+|++.||++||++.++++.|+..
T Consensus 221 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 221 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 0011123556799999999999999999999999999864
No 132
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-42 Score=304.31 Aligned_cols=246 Identities=21% Similarity=0.286 Sum_probs=198.9
Q ss_pred CCceecccCceEEEEEEe-CCCCEEEEEEeccc--chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 229 GNRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
..+.||+|.|+.||+... ++|+.+|+|++... +....+++.+|++|.+.|+||||+++.+.+.+....|||+|+|.|
T Consensus 15 l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G 94 (355)
T KOG0033|consen 15 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 94 (355)
T ss_pred HHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccc
Confidence 345679999999999875 56999999988643 334568899999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC---CCeEEecccccccCCccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE---FGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~---~~~kl~Dfg~~~~~~~~~ 382 (513)
++|..-|-. +...++..+-..++||+.||.|.|.+ +|||||+||+|+++.+. --+||+|||++..+....
T Consensus 95 ~dl~~eIV~----R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~ 167 (355)
T KOG0033|consen 95 GELFEDIVA----REFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE 167 (355)
T ss_pred hHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeCCcc
Confidence 999765533 25578889999999999999999999 99999999999999543 348999999999876332
Q ss_pred cccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 383 MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 383 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
... ...|||.|||||++...+|+..+|||+.|||||-|+.|.+||.+.+... +++... .+.+ +.
T Consensus 168 ~~~---G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r---lye~I~----~g~y-d~----- 231 (355)
T KOG0033|consen 168 AWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR---LYEQIK----AGAY-DY----- 231 (355)
T ss_pred ccc---cccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH---HHHHHh----cccc-CC-----
Confidence 222 2339999999999999999999999999999999999999998855431 111111 0100 00
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+......++++..+|+++||..||.+|.|+.|.|+
T Consensus 232 ----~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 232 ----PSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred ----CCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 11122356778999999999999999999999875
No 133
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=5.4e-40 Score=333.20 Aligned_cols=249 Identities=20% Similarity=0.247 Sum_probs=193.7
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
..+.||+|+||.||+|... +++.||||++..... .....+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 5 ~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~ 84 (381)
T cd05626 5 KIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 84 (381)
T ss_pred EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCC
Confidence 3456899999999999864 588999999976432 234568899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++.........
T Consensus 85 gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 85 GGDMMSLLIR----MEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 9999999864 34688999999999999999999999 9999999999999999999999999997643210000
Q ss_pred ---------------------------------------------cceeecCcccccccccccccCCCCchhhHHHHHHH
Q 010309 385 ---------------------------------------------ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 419 (513)
Q Consensus 385 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvi 419 (513)
.......||+.|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 00012348999999999998889999999999999
Q ss_pred HHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHh--cCCCCCCCCCHH
Q 010309 420 LLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYAC--TQHVPSMRPRMS 497 (513)
Q Consensus 420 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c--l~~dP~~RPs~~ 497 (513)
+|||+||..||...+..... ........ .+ ........++++.+||.+| +..+|..||+++
T Consensus 238 l~elltG~~Pf~~~~~~~~~------~~i~~~~~-------~~----~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~ 300 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQ------LKVINWEN-------TL----HIPPQVKLSPEAVDLITKLCCSAEERLGRNGAD 300 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHH------HHHHcccc-------cc----CCCCCCCCCHHHHHHHHHHccCcccccCCCCHH
Confidence 99999999999765432100 00000000 00 0011123456788999884 455666799999
Q ss_pred HHHH
Q 010309 498 HVVH 501 (513)
Q Consensus 498 evl~ 501 (513)
++++
T Consensus 301 ~~l~ 304 (381)
T cd05626 301 DIKA 304 (381)
T ss_pred HHhc
Confidence 9986
No 134
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.9e-39 Score=309.98 Aligned_cols=248 Identities=26% Similarity=0.398 Sum_probs=200.3
Q ss_pred eecccCceEEEEEEeCCCCEEEEEEecccchh-cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHH
Q 010309 232 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQ-RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 310 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 310 (513)
+||+|++|.||++...+++.||+|.+...... ....+.+|+.++++++||||+++++++.+....++||||+++++|.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~ 81 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT 81 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence 57999999999999877999999998765433 45678999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeec
Q 010309 311 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 390 (513)
Q Consensus 311 ~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 390 (513)
++... ...+++..+..++.+++.||+|||++ +++||||||+||+++.++.++|+|||.+...............
T Consensus 82 ~l~~~---~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 82 FLRKK---KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred HHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence 98642 24588999999999999999999999 9999999999999999999999999999865422211111112
Q ss_pred CcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCC
Q 010309 391 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDI 469 (513)
Q Consensus 391 ~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (513)
..+..|+|||.+.+..++.++||||||+++|||+| |..||........... .... . ...
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~-------~~~~-----~--------~~~ 215 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRER-------IESG-----Y--------RMP 215 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHH-------HhcC-----C--------CCC
Confidence 24567999999988889999999999999999999 8888866543211110 0000 0 001
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 470 PEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 470 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
.+...+..+.+++.+||+.+|++|||+.||++.|+.
T Consensus 216 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 216 APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 112345679999999999999999999999999863
No 135
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.2e-39 Score=310.56 Aligned_cols=246 Identities=30% Similarity=0.456 Sum_probs=201.9
Q ss_pred CCceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 229 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
..+.||.|++|.||+|.. .|+.||||.+..... ..+.+.+|+.+++.++|+||+++++++.+.+..++||||+++++|
T Consensus 10 ~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L 87 (256)
T cd05039 10 LGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSL 87 (256)
T ss_pred ceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcH
Confidence 345789999999999987 589999999987643 567899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++... ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||.+........
T Consensus 88 ~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~----- 157 (256)
T cd05039 88 VDYLRSR--GRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD----- 157 (256)
T ss_pred HHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc-----
Confidence 9999652 223689999999999999999999999 999999999999999999999999999987633221
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSS 467 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (513)
....+..|+|||.+....++.++||||||+++|||++ |..||....... +... ..... . .
T Consensus 158 ~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~----~~~~~-----~-------~ 218 (256)
T cd05039 158 SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPH----VEKGY-----R-------M 218 (256)
T ss_pred cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHH----HhcCC-----C-------C
Confidence 1125667999999988889999999999999999997 999986543221 1110 00000 0 0
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 468 DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 468 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
. .+...++.+.+++.+||+.+|++|||++++++.|+++
T Consensus 219 ~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 219 E-APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred C-CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0 1122456799999999999999999999999999864
No 136
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.1e-39 Score=317.08 Aligned_cols=257 Identities=25% Similarity=0.384 Sum_probs=203.8
Q ss_pred CCceecccCceEEEEEEeCC-----CCEEEEEEeccc-chhcHHHHHHHHHHHhhcCCCcEeeeeeEEee-CCceEEEEe
Q 010309 229 GNRLLGDSKTGGTYSGILPD-----GSRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD-HGDRYIVYE 301 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~lv~e 301 (513)
..++||+|+||.||+|...+ +..|++|++... .....+.+.+|+.++++++||||+++++++.. +...++++|
T Consensus 10 ~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 89 (280)
T cd05043 10 LSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYP 89 (280)
T ss_pred EeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEE
Confidence 45678999999999999765 788999998754 23345678899999999999999999998776 467899999
Q ss_pred eccCCCHHHHhccCCCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccccccc
Q 010309 302 FVVNGPLDRWLHHIPRG----GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF 377 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~ 377 (513)
|+++++|.+++...... ...+++..++.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||+++.
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~g~~~~ 166 (280)
T cd05043 90 YMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDNALSRD 166 (280)
T ss_pred cCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCCCCccc
Confidence 99999999998653322 15689999999999999999999999 999999999999999999999999999986
Q ss_pred CCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccc
Q 010309 378 VPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLE 456 (513)
Q Consensus 378 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (513)
+.............++..|+|||++.+..++.++||||||+++||+++ |+.||...+... +... ......
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~---~~~~~~--- 237 (280)
T cd05043 167 LFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE---MAAY---LKDGYR--- 237 (280)
T ss_pred ccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH---HHHH---HHcCCC---
Confidence 543322211111225678999999988889999999999999999999 999997654321 1111 000000
Q ss_pred cccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcC
Q 010309 457 LLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQ 508 (513)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 508 (513)
. . ....+++++.+++.+||+.||++|||+.++++.|+.+..
T Consensus 238 -----~-----~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 238 -----L-----A-QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred -----C-----C-CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0 0 011234678999999999999999999999999998754
No 137
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=9.1e-40 Score=316.99 Aligned_cols=253 Identities=25% Similarity=0.400 Sum_probs=200.6
Q ss_pred CceecccCceEEEEEEeCC------CCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 230 NRLLGDSKTGGTYSGILPD------GSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
.+.||+|+||.||+|.... +..||+|.+.... ......+.+|+.+++.++||||+++++++......++||||
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 90 (277)
T cd05032 11 IRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMEL 90 (277)
T ss_pred EeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEec
Confidence 4567999999999998642 4689999987553 23446788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCC------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccc
Q 010309 303 VVNGPLDRWLHHIPR------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK 376 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~ 376 (513)
+++++|.+++..... ....+++..++.++.|++.||.|||+. +++|+||||+|||++.++.+||+|||+++
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~dfg~~~ 167 (277)
T cd05032 91 MAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIGDFGMTR 167 (277)
T ss_pred CCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEECCcccch
Confidence 999999999965322 123478899999999999999999999 99999999999999999999999999987
Q ss_pred cCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhccccc
Q 010309 377 FVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYL 455 (513)
Q Consensus 377 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (513)
...............++..|+|||.+.+..++.++||||||+++|||+| |..||...+... ..... .....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~~----~~~~~- 239 (277)
T cd05032 168 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE---VLKFV----IDGGH- 239 (277)
T ss_pred hhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH---HHHHH----hcCCC-
Confidence 6543322111122236788999999988889999999999999999998 999987644321 11111 00000
Q ss_pred ccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 456 ELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
.. .+...+.++.+++.+||+.+|++|||+.++++.|++
T Consensus 240 -----------~~-~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 240 -----------LD-LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred -----------CC-CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 00 011235679999999999999999999999999864
No 138
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.3e-39 Score=311.38 Aligned_cols=251 Identities=28% Similarity=0.456 Sum_probs=202.9
Q ss_pred cCCceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 228 EGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
...+.||+|++|.||+|..++++.||||.+.... ...+++.+|+.++++++||||+++++++......++||||+++++
T Consensus 9 ~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 87 (261)
T cd05034 9 KLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGS 87 (261)
T ss_pred eeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCC
Confidence 3345789999999999998888899999997653 345779999999999999999999999999899999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++... ....+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||.+............
T Consensus 88 L~~~i~~~--~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 162 (261)
T cd05034 88 LLDFLKSG--EGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTARE 162 (261)
T ss_pred HHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchhhhhhh
Confidence 99999652 235689999999999999999999999 9999999999999999999999999999876532211111
Q ss_pred eecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 388 VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
....+..|+|||.+.+..++.++||||||+++|+|++ |+.||...... ...... ... ..
T Consensus 163 -~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~~~~~---~~~------~~------- 222 (261)
T cd05034 163 -GAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR---EVLEQV---ERG------YR------- 222 (261)
T ss_pred -ccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH---HcC------CC-------
Confidence 1114568999999998889999999999999999999 99999754321 111110 000 00
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
...+...+.++.+++.+||+.+|++||+++++++.|+.
T Consensus 223 -~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 -MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00111235679999999999999999999999999975
No 139
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.4e-39 Score=311.53 Aligned_cols=239 Identities=26% Similarity=0.390 Sum_probs=189.5
Q ss_pred eecccCceEEEEEEeCC-------------CCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEE
Q 010309 232 LLGDSKTGGTYSGILPD-------------GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYI 298 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 298 (513)
.||+|+||.||+|.... ...||+|.+..........+.+|+.++..++||||+++++++......++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 47999999999998532 23699999876654555678899999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCC-------eEEec
Q 010309 299 VYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG-------AHLMG 371 (513)
Q Consensus 299 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~-------~kl~D 371 (513)
||||+++++|..++.. ....+++..++.++.||+.||+|||+. +|+||||||+|||++.++. ++++|
T Consensus 82 v~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 82 VEEFVEFGPLDLFMHR---KSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred EEecccCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 9999999999998863 234589999999999999999999999 9999999999999987654 89999
Q ss_pred ccccccCCccccccceeecCcccccccccccc-cCCCCchhhHHHHHHHHHHHH-cCCCCCCCCCccccchhHHhhhHHh
Q 010309 372 VGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY-RNELTTKSDVYSFGVLLLEIV-SGRRPAQAVDSVCWQSIFEWATPLV 449 (513)
Q Consensus 372 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGvil~ell-tg~~p~~~~~~~~~~~~~~~~~~~~ 449 (513)
||++....... ...++..|+|||++. +..++.++||||||+++|||+ +|..|+......+.. ...
T Consensus 156 ~g~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-------~~~ 222 (262)
T cd05077 156 PGIPITVLSRQ------ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-------RFY 222 (262)
T ss_pred CCCCccccCcc------cccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-------HHH
Confidence 99987553221 122778899999886 466889999999999999998 588887654321100 000
Q ss_pred hcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 450 QSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
.. . . .. ....++++.+||.+||+.||.+||++.+|++.|+
T Consensus 223 ~~-~--------~----~~--~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 223 EG-Q--------C----ML--VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred hc-C--------c----cC--CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 00 0 0 00 0112356899999999999999999999998763
No 140
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.3e-39 Score=311.28 Aligned_cols=249 Identities=27% Similarity=0.413 Sum_probs=198.8
Q ss_pred CCceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 229 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
....||+|++|.||++....+..+|+|.+.... ...+.+.+|+.++++++||||+++++++. .+..++||||+++++|
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L 87 (260)
T cd05069 10 LDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSL 87 (260)
T ss_pred eeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCH
Confidence 345679999999999998777789999987543 34567889999999999999999999875 4568999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++... ....+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++........... .
T Consensus 88 ~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~-~ 161 (260)
T cd05069 88 LDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR-Q 161 (260)
T ss_pred HHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCccccc-C
Confidence 9999652 234588999999999999999999999 999999999999999999999999999976543221111 1
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSS 467 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (513)
...++..|+|||...+..++.++||||||+++|||+| |..||....... ..... ... .. .
T Consensus 162 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~---~~~------~~-------~ 222 (260)
T cd05069 162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE---VLEQV---ERG------YR-------M 222 (260)
T ss_pred CCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH---HcC------CC-------C
Confidence 1125678999999988889999999999999999999 899987644321 11100 000 00 0
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 468 DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 468 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
..+...+..+.+++.+||+.||++||++++|++.|++
T Consensus 223 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 -PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0112345679999999999999999999999999975
No 141
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.5e-39 Score=315.69 Aligned_cols=254 Identities=28% Similarity=0.413 Sum_probs=198.8
Q ss_pred CCceecccCceEEEEEEeCC------CCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEe
Q 010309 229 GNRLLGDSKTGGTYSGILPD------GSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYE 301 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 301 (513)
..+.||+|++|.||+|...+ +..||+|.+.... ......+.+|+.+++.++|+||+++++++.+.+..++|||
T Consensus 10 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 89 (277)
T cd05036 10 LLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLE 89 (277)
T ss_pred eeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEe
Confidence 34578999999999999753 5689999887543 2334678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC---CeEEeccccc
Q 010309 302 FVVNGPLDRWLHHIPR---GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF---GAHLMGVGLS 375 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~---~~kl~Dfg~~ 375 (513)
|+++++|.+++..... ....+++..++.++.||+.||+|||+. +++|+||||+||+++.++ .+||+|||++
T Consensus 90 ~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~ 166 (277)
T cd05036 90 LMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIADFGMA 166 (277)
T ss_pred cCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEeccCccc
Confidence 9999999999865321 123589999999999999999999999 999999999999998754 5899999999
Q ss_pred ccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccc
Q 010309 376 KFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRY 454 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (513)
+................+..|+|||++.+..++.++|||||||++|||++ |..||...+... ... ......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~---~~~----~~~~~~- 238 (277)
T cd05036 167 RDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE---VME----FVTGGG- 238 (277)
T ss_pred cccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH----HHHcCC-
Confidence 87633221111111113568999999998899999999999999999997 999997654321 111 111000
Q ss_pred cccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 455 LELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
....+...+..+.+++.+||+.+|++|||+.+|++.|++
T Consensus 239 ------------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 239 ------------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred ------------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 001112345679999999999999999999999998863
No 142
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=8.3e-40 Score=325.94 Aligned_cols=247 Identities=22% Similarity=0.260 Sum_probs=193.7
Q ss_pred CceecccCceEEEEEEe----CCCCEEEEEEecccc----hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEE
Q 010309 230 NRLLGDSKTGGTYSGIL----PDGSRVAVKRLKRSS----FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVY 300 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~ 300 (513)
.+.||+|+||.||++.. .+++.||+|++.+.. ....+.+.+|+.++..+ +||||+++++++...+..++||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLIL 84 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEE
Confidence 45689999999999885 358899999997542 12345678899999999 5999999999999999999999
Q ss_pred eeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCc
Q 010309 301 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 380 (513)
Q Consensus 301 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~ 380 (513)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 85 e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~ 157 (332)
T cd05614 85 DYVSGGEMFTHLYQ----RDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLS 157 (332)
T ss_pred eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence 99999999999854 34689999999999999999999999 999999999999999999999999999986533
Q ss_pred cccccceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccc
Q 010309 381 EVMQERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLD 459 (513)
Q Consensus 381 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (513)
..... .....||+.|+|||++.+. .++.++|||||||++|||+||..||...........+ ...... .+
T Consensus 158 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~--~~~~~~-------~~ 227 (332)
T cd05614 158 EEKER-TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEV--SRRILK-------CD 227 (332)
T ss_pred cCCCc-cccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHH--HHHHhc-------CC
Confidence 22211 1123489999999998765 4788999999999999999999999754322111110 000000 00
Q ss_pred ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Q 010309 460 PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRP-----RMSHVVH 501 (513)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 501 (513)
+ ..+...+..+.+++.+||+.||++|| +++++++
T Consensus 228 ~--------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 228 P--------PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred C--------CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 0 01122456789999999999999999 6777764
No 143
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=8.3e-40 Score=324.68 Aligned_cols=237 Identities=24% Similarity=0.305 Sum_probs=189.8
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCC-CcEeeeeeEEeeCCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHH-PNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
.+.||+|+||.||+|... +++.||||++.+.. ....+.+..|..++..+.| ++|+++++++.+.+..|+||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 84 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 84 (324)
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCC
Confidence 456899999999999975 47899999997642 2334567889999999966 568889999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++........
T Consensus 85 ~g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~- 156 (324)
T cd05587 85 GGDLMYHIQQ----VGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK- 156 (324)
T ss_pred CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC-
Confidence 9999998854 34589999999999999999999999 999999999999999999999999999875322211
Q ss_pred cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 385 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
......||+.|+|||++.+..++.++|||||||++|||+||+.||...+... ... ... ...
T Consensus 157 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~~---~i~-~~~----------- 217 (324)
T cd05587 157 -TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---LFQ---SIM-EHN----------- 217 (324)
T ss_pred -ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHH---HHH-cCC-----------
Confidence 1222348999999999999999999999999999999999999997654321 111 000 000
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRM 496 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 496 (513)
...+...+.++.+++.+||+.||.+||+.
T Consensus 218 ---~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 218 ---VSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ---CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 00112245678999999999999999986
No 144
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=7e-40 Score=337.38 Aligned_cols=261 Identities=19% Similarity=0.288 Sum_probs=190.5
Q ss_pred ccCCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--------CceE
Q 010309 227 SEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH--------GDRY 297 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--------~~~~ 297 (513)
+...+.||+|+||.||+|... +++.||||++.... ....+|+.+|+.++||||+++++++... ...+
T Consensus 68 y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~ 143 (440)
T PTZ00036 68 YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLN 143 (440)
T ss_pred EEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEE
Confidence 344567899999999999974 58899999886432 2345799999999999999999887532 1357
Q ss_pred EEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC-CeEEecccccc
Q 010309 298 IVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF-GAHLMGVGLSK 376 (513)
Q Consensus 298 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~-~~kl~Dfg~~~ 376 (513)
+||||++ ++|.+++.........+++..++.++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+++
T Consensus 144 lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 144 VVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred EEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 8999996 478777765444556799999999999999999999999 999999999999998665 69999999998
Q ss_pred cCCccccccceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhc----
Q 010309 377 FVPWEVMQERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQS---- 451 (513)
Q Consensus 377 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---- 451 (513)
......... ...+|+.|+|||++.+. .++.++|||||||++|||++|.+||.+..... .+..... ....
T Consensus 220 ~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~--~~~~i~~-~~~~p~~~ 293 (440)
T PTZ00036 220 NLLAGQRSV---SYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD--QLVRIIQ-VLGTPTED 293 (440)
T ss_pred hccCCCCcc---cCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHH-HhCCCCHH
Confidence 664322211 22378999999998764 68999999999999999999999998754321 1111100 0000
Q ss_pred ------ccccccccccccC-CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 452 ------HRYLELLDPLISS-LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 452 ------~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
..+.++.-+.... ......+...++++.+||.+||+.||.+|||+.|+++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 294 QLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 0000000000000 0000011124567999999999999999999999984
No 145
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-40 Score=316.96 Aligned_cols=257 Identities=21% Similarity=0.303 Sum_probs=212.1
Q ss_pred cccCCceecccCceEEEEEEe-CCCCEEEEEEecccchhc--HHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 226 FSEGNRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSFQR--KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 226 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
.+...+-||+|.|+.|-+|++ =+|.+||||++.+..... ...+.+|++.|+.++|||||++|++......+|||+|+
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 445566789999999999984 379999999998875433 46789999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEec-CCCCeEEecccccccCCcc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD-EEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~-~~~~~kl~Dfg~~~~~~~~ 381 (513)
-++|+|.+||-+. ...+.+..+.+++.||+.|+.|+|.. .+|||||||+||.+- .-|-+||.|||++..+...
T Consensus 99 GD~GDl~DyImKH---e~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 99 GDGGDLFDYIMKH---EEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred cCCchHHHHHHhh---hccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 9999999999753 35699999999999999999999999 999999999998774 5677999999999877654
Q ss_pred ccccceeecCcccccccccccccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 382 VMQERTVMAGGTYGYLAPEFVYRNELT-TKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 382 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
.. ....+|+..|.|||++.+..|+ ++.||||||||||.|++|++||+..++.+... -++|-
T Consensus 173 ~k---L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLT---------------mImDC 234 (864)
T KOG4717|consen 173 KK---LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLT---------------MIMDC 234 (864)
T ss_pred ch---hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhh---------------hhhcc
Confidence 32 3345699999999999999886 68899999999999999999998766542111 11111
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH--HHhcCcCCCCC
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH--QLQQLAQPPVT 512 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~~~~t 512 (513)
.-..+...+.++++||..||..||.+|.+.+||.. .|+..-+++.|
T Consensus 235 ------KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT 282 (864)
T KOG4717|consen 235 ------KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLST 282 (864)
T ss_pred ------cccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCccc
Confidence 11234568889999999999999999999999986 35555444443
No 146
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=7.8e-40 Score=329.97 Aligned_cols=248 Identities=19% Similarity=0.228 Sum_probs=192.7
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||+||++... +++.||||++.+... .....+.+|+.++..++||||+++++.+.+....++||||+++
T Consensus 6 ~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~g 85 (363)
T cd05628 6 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPG 85 (363)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCC
Confidence 457899999999999865 588999999976422 2335678899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc-
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ- 384 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~- 384 (513)
|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 86 g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 86 GDMMTLLMK----KDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999864 35689999999999999999999999 9999999999999999999999999998754321100
Q ss_pred --------------------------------cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 010309 385 --------------------------------ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQA 432 (513)
Q Consensus 385 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~ 432 (513)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 001123489999999999999999999999999999999999999976
Q ss_pred CCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCC---CCCCHHHHHHH
Q 010309 433 VDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPS---MRPRMSHVVHQ 502 (513)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~---~RPs~~evl~~ 502 (513)
.+... .. ....... ... ...+....++++.++|.+++. +|. .||+++||++.
T Consensus 239 ~~~~~---~~---~~i~~~~--~~~---------~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 239 ETPQE---TY---KKVMNWK--ETL---------IFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCHHH---HH---HHHHcCc--Ccc---------cCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCC
Confidence 54321 10 1110000 000 000111245578888888664 444 56899999873
No 147
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.9e-39 Score=314.28 Aligned_cols=239 Identities=27% Similarity=0.390 Sum_probs=188.7
Q ss_pred eecccCceEEEEEEeCC-------------------------CCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeee
Q 010309 232 LLGDSKTGGTYSGILPD-------------------------GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAV 286 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l 286 (513)
.||+|+||.||+|.... ...||+|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 47999999999997421 23599999976544445678899999999999999999
Q ss_pred eeEEeeCCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC-
Q 010309 287 KGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF- 365 (513)
Q Consensus 287 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~- 365 (513)
++++.+.+..++||||+++|+|..++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK---EKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGL 155 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCc
Confidence 9999999999999999999999998863 235689999999999999999999999 999999999999997643
Q ss_pred ------CeEEecccccccCCccccccceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHH-cCCCCCCCCCccc
Q 010309 366 ------GAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIV-SGRRPAQAVDSVC 437 (513)
Q Consensus 366 ------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell-tg~~p~~~~~~~~ 437 (513)
.+|++|||++........ ..++..|+|||.+.+ ..++.++||||||+++|||+ +|..||.......
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~~~------~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSREE------RVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred ccCccceeeecCCccccccccccc------cccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 379999998864422111 126788999998875 56789999999999999995 7999987654321
Q ss_pred cchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 438 WQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
.... .... ... +....+.+.++|.+||+.+|++|||+.+|++.|+
T Consensus 230 ~~~~-------~~~~-------~~~--------~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 KERF-------YEKK-------HRL--------PEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHH-------HHhc-------cCC--------CCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1110 0000 000 0112346899999999999999999999999874
No 148
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-39 Score=319.93 Aligned_cols=258 Identities=24% Similarity=0.394 Sum_probs=203.3
Q ss_pred CCceecccCceEEEEEEeC--------CCCEEEEEEecccc-hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEE
Q 010309 229 GNRLLGDSKTGGTYSGILP--------DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYI 298 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l 298 (513)
..+.||+|+||.||++... ++..||+|.+.... ......+.+|+.+++.+ +||||+++++++...+..++
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 98 (304)
T cd05101 19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 98 (304)
T ss_pred ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEE
Confidence 4467899999999999741 24579999987542 33456789999999999 89999999999999999999
Q ss_pred EEeeccCCCHHHHhccCCC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCC
Q 010309 299 VYEFVVNGPLDRWLHHIPR------------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 366 (513)
Q Consensus 299 v~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~ 366 (513)
||||+++++|.+++..... ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.
T Consensus 99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili~~~~~ 175 (304)
T cd05101 99 IVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLVTENNV 175 (304)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEEcCCCc
Confidence 9999999999999975321 123578889999999999999999999 9999999999999999999
Q ss_pred eEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhh
Q 010309 367 AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWA 445 (513)
Q Consensus 367 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 445 (513)
+||+|||+++...............+++.|+|||++.+..++.++||||||+++|+|++ |..||...+... +..
T Consensus 176 ~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~-- 250 (304)
T cd05101 176 MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFK-- 250 (304)
T ss_pred EEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH---HHH--
Confidence 99999999987644322222222235678999999988889999999999999999998 788886543221 111
Q ss_pred hHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCC
Q 010309 446 TPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQP 509 (513)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 509 (513)
.. .... ....+..++..+.+++.+||+.+|++|||+.+|++.|+++...
T Consensus 251 -~~-~~~~-------------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 251 -LL-KEGH-------------RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred -HH-HcCC-------------cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 11 1000 0001123456799999999999999999999999999887654
No 149
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.2e-39 Score=330.54 Aligned_cols=257 Identities=27% Similarity=0.378 Sum_probs=200.3
Q ss_pred CCceecccCceEEEEEEeC------CCCEEEEEEecccch-hcHHHHHHHHHHHhhcC-CCcEeeeeeEEeeCCceEEEE
Q 010309 229 GNRLLGDSKTGGTYSGILP------DGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLH-HPNLVAVKGCCYDHGDRYIVY 300 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~ 300 (513)
..+.||+|+||.||+|.+. .+..||||+++.... ...+.+.+|+.+|.++. ||||+++++++...+..++||
T Consensus 41 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~ 120 (401)
T cd05107 41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIIT 120 (401)
T ss_pred hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEE
Confidence 3567899999999999853 346899999976532 22457889999999997 999999999999999999999
Q ss_pred eeccCCCHHHHhccCCC---------------------------------------------------------------
Q 010309 301 EFVVNGPLDRWLHHIPR--------------------------------------------------------------- 317 (513)
Q Consensus 301 e~~~~gsL~~~l~~~~~--------------------------------------------------------------- 317 (513)
||+++|+|.++++....
T Consensus 121 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (401)
T cd05107 121 EYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVK 200 (401)
T ss_pred eccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhh
Confidence 99999999999964311
Q ss_pred -------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCC
Q 010309 318 -------------------------------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 366 (513)
Q Consensus 318 -------------------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~ 366 (513)
....+++..++.++.|++.||+|||+. +++||||||+|||++.++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl~~~~~ 277 (401)
T cd05107 201 YADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLICEGKL 277 (401)
T ss_pred hhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEEeCCCE
Confidence 112467788899999999999999999 9999999999999999999
Q ss_pred eEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhh
Q 010309 367 AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWA 445 (513)
Q Consensus 367 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 445 (513)
+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||......+ ..
T Consensus 278 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~------~~ 351 (401)
T cd05107 278 VKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE------QF 351 (401)
T ss_pred EEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH------HH
Confidence 99999999986532221111111226788999999988889999999999999999998 888986543211 00
Q ss_pred hHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 446 TPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
........ . .. .+...+.++.+|+.+||+.+|.+||++++|++.|+++.
T Consensus 352 ~~~~~~~~-----~-------~~-~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 352 YNAIKRGY-----R-------MA-KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHHcCC-----C-------CC-CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 01111000 0 00 11124567999999999999999999999999998764
No 150
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.7e-39 Score=311.56 Aligned_cols=248 Identities=24% Similarity=0.346 Sum_probs=199.4
Q ss_pred eecccCceEEEEEEeCC--C--CEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILPD--G--SRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.||+|++|.||+|.+.+ + ..||||.+..... ...+.+.+|+.++++++||||+++++.+.. ...++||||++++
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence 57999999999999643 3 3699999987755 556789999999999999999999999988 8899999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc-c
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ-E 385 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~ 385 (513)
+|.+++..... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++......... .
T Consensus 81 ~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (257)
T cd05040 81 SLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV 155 (257)
T ss_pred cHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccccccccee
Confidence 99999975322 4689999999999999999999999 9999999999999999999999999999876542211 1
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
......++..|+|||.+.+..++.++||||||+++|||++ |..||...+... ... ...... ...
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~---~~~~~~-------~~~-- 220 (257)
T cd05040 156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ---ILK---KIDKEG-------ERL-- 220 (257)
T ss_pred cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHH---HHHhcC-------CcC--
Confidence 1112236788999999988899999999999999999999 999986543321 111 000000 000
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
..+...+..+.+++.+||+.+|++|||+.+|++.|.
T Consensus 221 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 ----ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ----CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 001123567999999999999999999999999885
No 151
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-39 Score=319.82 Aligned_cols=259 Identities=26% Similarity=0.419 Sum_probs=202.2
Q ss_pred cCCceecccCceEEEEEEeC--------CCCEEEEEEecccc-hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceE
Q 010309 228 EGNRLLGDSKTGGTYSGILP--------DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRY 297 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 297 (513)
...+.||+|+||.||++... +...+|+|.++... ......+.+|+.+++.+ +||||+++++++...+..+
T Consensus 21 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 100 (307)
T cd05098 21 VLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 100 (307)
T ss_pred EEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceE
Confidence 44556799999999999852 23579999997642 23446788899999999 7999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCCC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC
Q 010309 298 IVYEFVVNGPLDRWLHHIPR------------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 365 (513)
Q Consensus 298 lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~ 365 (513)
+||||+++|+|.+++..... ....+++.+++.++.|++.||+|||+. +++||||||+||+++.++
T Consensus 101 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~~~~ 177 (307)
T cd05098 101 VIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDN 177 (307)
T ss_pred EEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEcCCC
Confidence 99999999999999975321 123588999999999999999999999 999999999999999999
Q ss_pred CeEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHh
Q 010309 366 GAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEW 444 (513)
Q Consensus 366 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~ 444 (513)
.+||+|||.+................+++.|+|||++.+..++.++||||||+++|||++ |..||...... .+..
T Consensus 178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~---~~~~- 253 (307)
T cd05098 178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---ELFK- 253 (307)
T ss_pred cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH---HHHH-
Confidence 999999999876543221111111124568999999988889999999999999999998 88888654321 1111
Q ss_pred hhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCC
Q 010309 445 ATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQP 509 (513)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 509 (513)
....... .. .+...+.++.+|+.+||+.+|++|||+.+|++.|+++...
T Consensus 254 ---~~~~~~~------------~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 254 ---LLKEGHR------------MD-KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred ---HHHcCCC------------CC-CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 0111000 00 1123456799999999999999999999999999887543
No 152
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=5.1e-40 Score=331.65 Aligned_cols=246 Identities=19% Similarity=0.232 Sum_probs=195.0
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||.||++... +++.||+|++.+.. ......+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~g 127 (370)
T cd05596 48 IKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPG 127 (370)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCC
Confidence 456799999999999975 58899999997532 22335578899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++..........
T Consensus 128 g~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~ 199 (370)
T cd05596 128 GDLVNLMSN-----YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVR 199 (370)
T ss_pred CcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCccc
Confidence 999999864 3588899999999999999999999 99999999999999999999999999998654322111
Q ss_pred ceeecCcccccccccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccc
Q 010309 386 RTVMAGGTYGYLAPEFVYRN----ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPL 461 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (513)
.....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+... .. ........ .
T Consensus 200 -~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~---~~---~~i~~~~~--~----- 265 (370)
T cd05596 200 -CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG---TY---SKIMDHKN--S----- 265 (370)
T ss_pred -CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH---HH---HHHHcCCC--c-----
Confidence 1123489999999998653 47889999999999999999999998654321 10 11110000 0
Q ss_pred ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCC--CCCHHHHHH
Q 010309 462 ISSLSSDIPEAGVVQKVVDLVYACTQHVPSM--RPRMSHVVH 501 (513)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 501 (513)
+ ........+.++.+||.+||+.+|.+ |||++++++
T Consensus 266 ~----~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 266 L----TFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred C----CCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 0 00111134667999999999999988 999999975
No 153
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.8e-39 Score=312.50 Aligned_cols=250 Identities=28% Similarity=0.485 Sum_probs=196.6
Q ss_pred eecccCceEEEEEEeCC-CC--EEEEEEecccc-hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILPD-GS--RVAVKRLKRSS-FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
+||+|+||.||+|...+ +. .+|+|.++... ....+.+.+|+.++.++ +||||+++++++...+..++||||++++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 57999999999999754 43 57899887532 33456788999999999 8999999999999999999999999999
Q ss_pred CHHHHhccCCC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccc
Q 010309 307 PLDRWLHHIPR------------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGL 374 (513)
Q Consensus 307 sL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 374 (513)
+|.+++..... ....+++..+..++.|++.||+|||+. +++|+||||+|||++.++.+||+|||+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCCC
Confidence 99999864321 123588999999999999999999999 999999999999999999999999999
Q ss_pred cccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhccc
Q 010309 375 SKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHR 453 (513)
Q Consensus 375 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 453 (513)
+....... .......+..|+|||++....++.++||||||+++|||++ |..||...+... ... .......
T Consensus 159 ~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~~~---~~~~~~~ 229 (270)
T cd05047 159 SRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LYE---KLPQGYR 229 (270)
T ss_pred ccccchhh---hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH---HHH---HHhCCCC
Confidence 86432111 1111224567999999988889999999999999999997 999996543211 111 0000000
Q ss_pred ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 454 YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
.. .+...+.++.+++.+||+.||.+|||+.++++.|+++.
T Consensus 230 -------------~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 230 -------------LE-KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -------------CC-CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 00 01123457899999999999999999999999998764
No 154
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.3e-40 Score=332.42 Aligned_cols=248 Identities=21% Similarity=0.259 Sum_probs=199.1
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||.||+|... +|+.||||+++.... .....+.+|+.++..++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPG 85 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCC
Confidence 457899999999999975 689999999976422 3346788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccc---
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV--- 382 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--- 382 (513)
++|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 86 ~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 86 GDLMNLLIRK----DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 9999999642 5689999999999999999999999 99999999999999999999999999998664432
Q ss_pred ------------------------cccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcccc
Q 010309 383 ------------------------MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCW 438 (513)
Q Consensus 383 ------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~ 438 (513)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 00111123389999999999999999999999999999999999999986543210
Q ss_pred chhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHH
Q 010309 439 QSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPR-MSHVVHQ 502 (513)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 502 (513)
........ . .+ ........++++.+||.+||. ||.+||+ ++++++.
T Consensus 239 ------~~~i~~~~---~----~~----~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 239 ------YNKIINWK---E----SL----RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred ------HHHHhccC---C----cc----cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 00110000 0 00 000011146679999999997 9999999 9999863
No 155
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.3e-39 Score=312.46 Aligned_cols=251 Identities=22% Similarity=0.290 Sum_probs=197.6
Q ss_pred cCCceecccCceEEEEEEe-CCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 228 EGNRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
+..+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++||||+++++++...+..++||||++++
T Consensus 12 ~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~ 91 (267)
T cd06646 12 ELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGG 91 (267)
T ss_pred chhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCC
Confidence 3445679999999999996 468899999997654445567889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++.........
T Consensus 92 ~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~-- 162 (267)
T cd06646 92 SLQDIYHV----TGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK-- 162 (267)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecccccc--
Confidence 99998853 34689999999999999999999999 9999999999999999999999999999865432211
Q ss_pred eeecCcccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 387 TVMAGGTYGYLAPEFVY---RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
.....++..|+|||.+. ...++.++||||||+++|||++|..||........ .. ..... ....+..
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~--~~-----~~~~~---~~~~~~~- 231 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA--LF-----LMSKS---NFQPPKL- 231 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh--he-----eeecC---CCCCCCC-
Confidence 11223788999999884 34578899999999999999999999864432100 00 00000 0000000
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQL 503 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 503 (513)
......+..+.+++.+||+.+|++|||+++|++.|
T Consensus 232 -----~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 232 -----KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred -----ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 01123456799999999999999999999998753
No 156
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.3e-40 Score=326.22 Aligned_cols=240 Identities=21% Similarity=0.275 Sum_probs=189.3
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHH-HHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEI-GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~-~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.||+|+||.||++... +++.||+|++..... .....+..|. .+++.++||||+++++++...+..++||||++++
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 5799999999999975 578899999975422 2223444444 4567889999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++........ .
T Consensus 82 ~L~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~--~ 152 (325)
T cd05602 82 ELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG--T 152 (325)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC--C
Confidence 99999864 34588889999999999999999999 999999999999999999999999999875432211 1
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....||+.|+|||++.+..++.++|||||||++|||++|.+||...+... ... .... ...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~---~i~~---------~~~---- 213 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---MYD---NILN---------KPL---- 213 (325)
T ss_pred cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH---HHH---HHHh---------CCc----
Confidence 122348999999999999999999999999999999999999997654321 111 1100 000
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
......+..+.+++.+||+.||.+||++.+.+.
T Consensus 214 --~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 214 --QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred --CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 011134567899999999999999999875443
No 157
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3e-39 Score=309.45 Aligned_cols=246 Identities=24% Similarity=0.346 Sum_probs=200.4
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEeccc--chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|++|.||++... +++.|++|.+... .......+.+|+++++.++||||+++++++.+.+..++||||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENG 84 (256)
T ss_pred eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCC
Confidence 346799999999999975 5899999998653 2344577899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++... ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++..........
T Consensus 85 ~L~~~l~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~- 158 (256)
T cd08529 85 DLHKLLKMQ--RGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFA- 158 (256)
T ss_pred cHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccchh-
Confidence 999999752 235689999999999999999999999 99999999999999999999999999988665432211
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
....+++.|+|||++.+..++.++||||||+++|+|++|+.||...+... .. ... .. ...
T Consensus 159 -~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~---~~~-~~--------~~~---- 218 (256)
T cd08529 159 -NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA---LI---LKI-IR--------GVF---- 218 (256)
T ss_pred -hccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH---HH---HHH-Hc--------CCC----
Confidence 12237889999999998889999999999999999999999997654211 00 000 00 000
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
.. .....+..+.+++.+||+.+|++||++.++++.
T Consensus 219 ~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 219 PP-VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CC-CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 11 111355679999999999999999999999863
No 158
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.1e-39 Score=323.65 Aligned_cols=237 Identities=24% Similarity=0.338 Sum_probs=190.0
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
.+.||+|+||.||+|... +++.||||++.+... ...+.+..|..++..+ +|++|+++++++.+.+..++||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 84 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVN 84 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCC
Confidence 456899999999999975 478999999976422 2234567788888777 68999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++.........
T Consensus 85 ~g~L~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~ 157 (323)
T cd05616 85 GGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT 157 (323)
T ss_pred CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence 9999998854 24589999999999999999999999 9999999999999999999999999998754322211
Q ss_pred cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 385 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||...+... +.. .... ..
T Consensus 158 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~---~~~---~i~~-~~----------- 217 (323)
T cd05616 158 --TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LFQ---SIME-HN----------- 217 (323)
T ss_pred --cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH---HHH---HHHh-CC-----------
Confidence 122348999999999999999999999999999999999999997654321 111 0000 00
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRM 496 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 496 (513)
...+...+.++.+++.+||+.||++|++.
T Consensus 218 ---~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 218 ---VAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ---CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 01112345678999999999999999985
No 159
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.2e-39 Score=317.47 Aligned_cols=262 Identities=22% Similarity=0.321 Sum_probs=198.5
Q ss_pred cCCceecccCceEEEEEEeCC---------------CCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEe
Q 010309 228 EGNRLLGDSKTGGTYSGILPD---------------GSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCY 291 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~ 291 (513)
+..+.||+|+||.||++.... ...||+|.++... ......+.+|++++++++||||+++++++.
T Consensus 8 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~ 87 (295)
T cd05097 8 RLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCV 87 (295)
T ss_pred eehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEc
Confidence 344568999999999987532 2358999997652 233467899999999999999999999999
Q ss_pred eCCceEEEEeeccCCCHHHHhccCCC--------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecC
Q 010309 292 DHGDRYIVYEFVVNGPLDRWLHHIPR--------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE 363 (513)
Q Consensus 292 ~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~ 363 (513)
..+..++||||+++++|.+++..... ....+++..++.++.|++.||+|||+. +++|+||||+||+++.
T Consensus 88 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nill~~ 164 (295)
T cd05097 88 SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCLVGN 164 (295)
T ss_pred CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEEEcC
Confidence 99999999999999999999854211 112478899999999999999999999 9999999999999999
Q ss_pred CCCeEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCccccchh
Q 010309 364 EFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS--GRRPAQAVDSVCWQSI 441 (513)
Q Consensus 364 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt--g~~p~~~~~~~~~~~~ 441 (513)
++.+||+|||++................++..|+|||++.+..++.++||||||+++|+|++ |..||....... .
T Consensus 165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~---~ 241 (295)
T cd05097 165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ---V 241 (295)
T ss_pred CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH---H
Confidence 99999999999976543322111112225678999999988889999999999999999998 667776544321 1
Q ss_pred HHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 442 FEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
............ .... .. .+...++.+.+|+.+||+.||++|||+++|++.|++
T Consensus 242 ~~~~~~~~~~~~-----~~~~----~~-~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 242 IENTGEFFRNQG-----RQIY----LS-QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHHhhhhcc-----cccc----CC-CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 111111110000 0000 00 011234579999999999999999999999999864
No 160
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.2e-40 Score=327.78 Aligned_cols=240 Identities=23% Similarity=0.291 Sum_probs=189.7
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHH-HHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIG-RFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
+||+|+||.||++... +|+.||+|++.+.. ......+..|.. +++.++||||+++++.+...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 5799999999999964 68999999997542 122344555654 467789999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|..++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++........ .
T Consensus 82 ~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--~ 152 (325)
T cd05604 82 ELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD--T 152 (325)
T ss_pred CHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC--C
Confidence 99988853 35689999999999999999999999 999999999999999999999999999875432211 1
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....||+.|+|||++.+..++.++|||||||++|||++|..||...+... +. ..... ..+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~---~~~~~---------~~~---- 213 (325)
T cd05604 153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE---MY---DNILH---------KPL---- 213 (325)
T ss_pred cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH---HH---HHHHc---------CCc----
Confidence 122348999999999999999999999999999999999999997654321 11 11110 000
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. .....+..+.+++.+||+.||.+||++.+.++
T Consensus 214 ~--~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 214 V--LRPGASLTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred c--CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 0 01123456889999999999999998864333
No 161
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.4e-39 Score=309.51 Aligned_cols=248 Identities=29% Similarity=0.424 Sum_probs=197.6
Q ss_pred eecccCceEEEEEEeCC----CCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILPD----GSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.||+|+||.||+|.... +..||+|.+..... ...+.+.+|+.+++.+.||||+++++++. .+..++||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~ 80 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLG 80 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCC
Confidence 57999999999998532 36899999986643 34567899999999999999999999875 55789999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. ...+++..+..++.|++.||+|||+. +++|+||||+|||++.++.+||+|||++...........
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 81 PLLKYLKK----RREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred cHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence 99999964 23689999999999999999999999 999999999999999999999999999986643322111
Q ss_pred -eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 387 -TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 387 -~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
.....++..|+|||.+.+..++.++||||||+++|||++ |..||...+... +.... ....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~---~~~~~----~~~~----------- 215 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE---VIAML----ESGE----------- 215 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH---HHHHH----HcCC-----------
Confidence 111113567999999988899999999999999999998 999997654321 11111 1110
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
....+...+..+.++|.+||+.+|++||++.+|++.|+++.
T Consensus 216 --~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 216 --RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred --cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 00111224467999999999999999999999999998764
No 162
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=5.9e-39 Score=314.47 Aligned_cols=260 Identities=23% Similarity=0.346 Sum_probs=200.8
Q ss_pred CceecccCceEEEEEEeCC-----------------CCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEe
Q 010309 230 NRLLGDSKTGGTYSGILPD-----------------GSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCY 291 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~ 291 (513)
.+.||+|+||.||++...+ +..||+|.+.... ....+.+.+|+.++++++||||+++++++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 89 (296)
T cd05051 10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCT 89 (296)
T ss_pred cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 4567999999999988642 2468999987653 234567899999999999999999999999
Q ss_pred eCCceEEEEeeccCCCHHHHhccCCC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC
Q 010309 292 DHGDRYIVYEFVVNGPLDRWLHHIPR-------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE 364 (513)
Q Consensus 292 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~ 364 (513)
.++..++||||+++++|.+++..... ....+++..++.++.|++.||+|||+. +++|+||||+||+++.+
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~Nili~~~ 166 (296)
T cd05051 90 VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRNCLVGKN 166 (296)
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---CccccccchhceeecCC
Confidence 99999999999999999999865321 123689999999999999999999999 99999999999999999
Q ss_pred CCeEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCccccchhH
Q 010309 365 FGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS--GRRPAQAVDSVCWQSIF 442 (513)
Q Consensus 365 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt--g~~p~~~~~~~~~~~~~ 442 (513)
+.++|+|||++................+++.|+|||++.+..++.++||||||+++|||++ +..||...... ...
T Consensus 167 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~---~~~ 243 (296)
T cd05051 167 YTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ---QVI 243 (296)
T ss_pred CceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH---HHH
Confidence 9999999999986543322222222336778999999988889999999999999999998 67787654321 111
Q ss_pred HhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 443 EWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
.............. ....+...+.++.+++.+||+.||++|||+.+|++.|++
T Consensus 244 ~~~~~~~~~~~~~~----------~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 244 ENAGHFFRDDGRQI----------YLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HHHHhccccccccc----------cCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 11111100000000 000112244679999999999999999999999999864
No 163
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.1e-39 Score=329.23 Aligned_cols=247 Identities=19% Similarity=0.224 Sum_probs=195.7
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.++||+|+||.||++... +|+.||||++.... ......+.+|+.++..++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~ 85 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPG 85 (364)
T ss_pred EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCC
Confidence 457899999999999975 58999999997542 22345678899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+|||++..+.......
T Consensus 86 g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 86 GDMMTLLMK----KDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred cHHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 999999864 34689999999999999999999999 99999999999999999999999999987543211000
Q ss_pred ------------------------------------ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCC
Q 010309 386 ------------------------------------RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRP 429 (513)
Q Consensus 386 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p 429 (513)
......||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 00112489999999999999999999999999999999999999
Q ss_pred CCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCC---HHHHHH
Q 010309 430 AQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPR---MSHVVH 501 (513)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 501 (513)
|...+... . ........ ..+ ........++++.+||.+|+. +|.+|++ ++++++
T Consensus 239 f~~~~~~~---~---~~~i~~~~-------~~~----~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 239 FCSDNPQE---T---YRKIINWK-------ETL----QFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCHHH---H---HHHHHcCC-------Ccc----CCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 97654321 0 01111000 000 000111245678999999996 9999998 888876
No 164
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=7.7e-40 Score=324.56 Aligned_cols=236 Identities=24% Similarity=0.314 Sum_probs=187.2
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHH-HHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIG-RFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
+||+|+||.||+|+.. +++.||+|++.+... .....+..|.. +++.++||||+++++++.+.+..++||||++++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 5899999999999975 588999999975422 22344555554 678889999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|...+.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++........ .
T Consensus 82 ~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~ 152 (321)
T cd05603 82 ELFFHLQR----ERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE--T 152 (321)
T ss_pred CHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC--c
Confidence 99888853 35688999999999999999999999 999999999999999999999999999875322211 1
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....||+.|+|||++.+..++.++|||||||++|||++|..||...+.. .+.+ .... ...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~---~i~~---------~~~---- 213 (321)
T cd05603 153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS---QMYD---NILH---------KPL---- 213 (321)
T ss_pred cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH---HHHH---HHhc---------CCC----
Confidence 12234899999999999888999999999999999999999999765421 1111 1000 000
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMS 497 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 497 (513)
..+...+..+.+++.+||+.||.+||++.
T Consensus 214 --~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 214 --QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred --CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 01112345789999999999999999864
No 165
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.9e-39 Score=308.93 Aligned_cols=244 Identities=29% Similarity=0.434 Sum_probs=196.3
Q ss_pred CceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEe-eCCceEEEEeeccCCCH
Q 010309 230 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY-DHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~lv~e~~~~gsL 308 (513)
.+.||+|++|.||++.. .|..||+|.++... ..+.+.+|+.++++++|+||+++++++. ..+..++||||+++++|
T Consensus 11 ~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L 87 (256)
T cd05082 11 LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 87 (256)
T ss_pred eeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcH
Confidence 45789999999999987 58889999986542 3567899999999999999999999764 45678999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++... ....+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++........
T Consensus 88 ~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~----- 157 (256)
T cd05082 88 VDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD----- 157 (256)
T ss_pred HHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccCC-----
Confidence 9998652 234588999999999999999999999 999999999999999999999999999876533221
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSS 467 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (513)
...++..|+|||++.+..++.++||||||+++|||++ |+.||...... ..... ..... . .
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~---~~~~~----~~~~~-----~-------~ 218 (256)
T cd05082 158 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPR----VEKGY-----K-------M 218 (256)
T ss_pred CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH----HhcCC-----C-------C
Confidence 1125668999999988889999999999999999998 99998654321 11111 11000 0 0
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 468 DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 468 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
......++.+.+++.+||+.+|++|||+.++++.|+++
T Consensus 219 -~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 219 -DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 01123456799999999999999999999999999864
No 166
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.8e-39 Score=317.02 Aligned_cols=253 Identities=29% Similarity=0.475 Sum_probs=198.3
Q ss_pred CceecccCceEEEEEEeCC-C--CEEEEEEeccc-chhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILPD-G--SRVAVKRLKRS-SFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~-~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
.++||+|+||.||+|...+ + ..+++|.++.. .....+.+.+|+.++.++ +||||+++++++...+..++||||++
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 86 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAP 86 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecC
Confidence 4578999999999998754 3 35789988743 233456789999999999 79999999999999999999999999
Q ss_pred CCCHHHHhccCCC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecc
Q 010309 305 NGPLDRWLHHIPR------------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGV 372 (513)
Q Consensus 305 ~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 372 (513)
+++|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+|||++.++.+||+||
T Consensus 87 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~df 163 (297)
T cd05089 87 YGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLASKIADF 163 (297)
T ss_pred CCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeEEECCc
Confidence 9999999964221 113588999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhc
Q 010309 373 GLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQS 451 (513)
Q Consensus 373 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 451 (513)
|++........ ......+..|+|||++.+..++.++|||||||++|||++ |..||....... ... ....
T Consensus 164 g~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~---~~~---~~~~- 233 (297)
T cd05089 164 GLSRGEEVYVK---KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE---LYE---KLPQ- 233 (297)
T ss_pred CCCccccceec---cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH---HHhc-
Confidence 99874322111 111113567999999988889999999999999999998 999997654321 111 0000
Q ss_pred ccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcC
Q 010309 452 HRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQ 508 (513)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 508 (513)
. .. .. .+..++..+.+|+.+||+.+|.+||+++++++.|+.+..
T Consensus 234 ~-----~~-------~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 234 G-----YR-------ME-KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred C-----CC-------CC-CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0 00 00 112245679999999999999999999999999887654
No 167
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.8e-39 Score=311.37 Aligned_cols=254 Identities=24% Similarity=0.343 Sum_probs=192.7
Q ss_pred eecccCceEEEEEEeCC---CCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 232 LLGDSKTGGTYSGILPD---GSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.||+|+||.||+|...+ +..+|+|.++.... .....+.+|+.++++++||||+++++.+.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 47999999999998643 45799999876532 334578899999999999999999999999999999999999999
Q ss_pred HHHHhccCCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 308 LDRWLHHIPR-GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 308 L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
|.+++..... ....+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++...........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 9999965322 223567778889999999999999999 999999999999999999999999999975443322111
Q ss_pred eeecCcccccccccccccC-------CCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccc
Q 010309 387 TVMAGGTYGYLAPEFVYRN-------ELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELL 458 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (513)
.....++..|+|||++.+. .++.++||||||+++|||++ |..||........ ... ... .......
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~---~~~---~~~-~~~~~~~ 231 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV---LTY---TVR-EQQLKLP 231 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH---HHH---Hhh-cccCCCC
Confidence 1122367889999998642 35789999999999999996 9999976443211 000 000 0001111
Q ss_pred cccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 459 DPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
.+.+ ....++.+.+++.+|+ .+|++|||+++|+..|+
T Consensus 232 ~~~~--------~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 232 KPRL--------KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCcc--------CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1111 1123456889999999 68999999999999885
No 168
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.9e-39 Score=313.85 Aligned_cols=257 Identities=27% Similarity=0.431 Sum_probs=200.1
Q ss_pred CceecccCceEEEEEEeC------CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 230 NRLLGDSKTGGTYSGILP------DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
.+.||+|+||.||+|... .+..||+|.+.... ......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 90 (288)
T cd05061 11 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMEL 90 (288)
T ss_pred eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeC
Confidence 456799999999999753 24589999987543 23345678899999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCC------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccc
Q 010309 303 VVNGPLDRWLHHIPR------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK 376 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~ 376 (513)
+++|+|.+++..... ....++...+..++.|++.||.|||++ +|+||||||+||+++.++.++|+|||+++
T Consensus 91 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~Dfg~~~ 167 (288)
T cd05061 91 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 167 (288)
T ss_pred CCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEECcCCccc
Confidence 999999999965321 123456788899999999999999999 99999999999999999999999999988
Q ss_pred cCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhccccc
Q 010309 377 FVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYL 455 (513)
Q Consensus 377 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (513)
...............++..|+|||.+.+..++.++||||||+++|||++ |..||...+... ... .... ....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~---~~~---~~~~-~~~~ 240 (288)
T cd05061 168 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ---VLK---FVMD-GGYL 240 (288)
T ss_pred cccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH---HHHc-CCCC
Confidence 6543222111111225678999999988889999999999999999998 788887644321 111 0000 0000
Q ss_pred ccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCC
Q 010309 456 ELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQP 509 (513)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 509 (513)
. .+...++.+.+++.+||+.||++|||+.++++.|++...+
T Consensus 241 ------------~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 281 (288)
T cd05061 241 ------------D-QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 281 (288)
T ss_pred ------------C-CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCC
Confidence 0 0112346799999999999999999999999999876544
No 169
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=4.5e-39 Score=310.65 Aligned_cols=251 Identities=25% Similarity=0.437 Sum_probs=200.0
Q ss_pred CceecccCceEEEEEEeCC-C---CEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILPD-G---SRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
.+.||+|++|.||+|.... + ..+|+|.++... ....+.+.+|+.++++++||||+++.+++...+..++||||++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYME 89 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCC
Confidence 4578999999999999753 3 379999987652 3345678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+++|.+++.. ....+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++.........
T Consensus 90 ~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 163 (268)
T cd05063 90 NGALDKYLRD---HDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEG 163 (268)
T ss_pred CCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceeccccccc
Confidence 9999999864 235689999999999999999999999 9999999999999999999999999999866433221
Q ss_pred cce-eecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 385 ERT-VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 385 ~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
... .....+..|+|||++.+..++.++||||||+++|||++ |..||...+... ... . .....
T Consensus 164 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~---~~~---~-i~~~~--------- 227 (268)
T cd05063 164 TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE---VMK---A-INDGF--------- 227 (268)
T ss_pred ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH---HHH---H-HhcCC---------
Confidence 111 11113457999999988889999999999999999998 999996544321 111 1 00000
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
........+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 228 ----~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 228 ----RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0001112456789999999999999999999999999876
No 170
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4.1e-39 Score=309.54 Aligned_cols=252 Identities=25% Similarity=0.403 Sum_probs=201.6
Q ss_pred ccCCceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 227 SEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
....+.||+|+||.||++...++..+|+|.+.... ...+.+.+|+.++++++|+||+++.+.+.+ ...+++|||++++
T Consensus 8 ~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~ 85 (260)
T cd05073 8 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKG 85 (260)
T ss_pred eeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCC
Confidence 34456789999999999998788889999987643 345678999999999999999999999887 7789999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++... ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||.+...........
T Consensus 86 ~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (260)
T cd05073 86 SLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 160 (260)
T ss_pred cHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc
Confidence 999999652 235688899999999999999999999 999999999999999999999999999976543221111
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
....++..|+|||++....++.++|+||||+++|+++| |..||...+.... ... .....
T Consensus 161 -~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~---~~~----~~~~~------------ 220 (260)
T cd05073 161 -EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV---IRA----LERGY------------ 220 (260)
T ss_pred -cCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH---HHH----HhCCC------------
Confidence 11125677999999988889999999999999999999 9999976543211 110 00000
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
........+.++.+++.+||+.+|++||++.++++.|+.+
T Consensus 221 -~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 221 -RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred -CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 0001123445799999999999999999999999999863
No 171
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=8.5e-40 Score=325.57 Aligned_cols=247 Identities=23% Similarity=0.274 Sum_probs=196.8
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||.||++... +|+.||||+++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (330)
T cd05601 6 KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPG 85 (330)
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCC
Confidence 456799999999999965 689999999986532 2345688899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.........
T Consensus 86 ~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~- 158 (330)
T cd05601 86 GDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV- 158 (330)
T ss_pred CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCCce-
Confidence 9999999642 24699999999999999999999999 9999999999999999999999999999876543222
Q ss_pred ceeecCcccccccccccc------cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccc
Q 010309 386 RTVMAGGTYGYLAPEFVY------RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLD 459 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (513)
......||+.|+|||++. ...++.++|||||||++|||++|..||....... ............
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~------~~~~i~~~~~~~---- 228 (330)
T cd05601 159 NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK------TYNNIMNFQRFL---- 228 (330)
T ss_pred eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH------HHHHHHcCCCcc----
Confidence 112234899999999986 4567889999999999999999999997654321 011111100000
Q ss_pred ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 460 PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
........+..+.+|+.+||+ +|.+|||++++++
T Consensus 229 -------~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 229 -------KFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred -------CCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 000111245678999999998 9999999999885
No 172
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=5.9e-39 Score=314.54 Aligned_cols=262 Identities=21% Similarity=0.322 Sum_probs=199.5
Q ss_pred cCCceecccCceEEEEEEeC-----------------CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeE
Q 010309 228 EGNRLLGDSKTGGTYSGILP-----------------DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGC 289 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~ 289 (513)
+..+.||+|+||.||++... ++..||+|++.... ......+.+|+.+++.++||||++++++
T Consensus 8 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~ 87 (296)
T cd05095 8 TFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAV 87 (296)
T ss_pred eeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 33456899999999998532 24469999997543 3345688999999999999999999999
Q ss_pred EeeCCceEEEEeeccCCCHHHHhccCCCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEec
Q 010309 290 CYDHGDRYIVYEFVVNGPLDRWLHHIPRG-------GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 362 (513)
Q Consensus 290 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~ 362 (513)
+...+..++||||+++++|.+++...... ...+++..+..++.|++.||+|||+. +++|+||||+|||++
T Consensus 88 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Nili~ 164 (296)
T cd05095 88 CITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNCLVG 164 (296)
T ss_pred EecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheEEEc
Confidence 99999999999999999999998653211 13478889999999999999999999 999999999999999
Q ss_pred CCCCeEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCccccch
Q 010309 363 EEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS--GRRPAQAVDSVCWQS 440 (513)
Q Consensus 363 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt--g~~p~~~~~~~~~~~ 440 (513)
.++.++|+|||++................++..|+|||...++.++.++||||||+++|||++ |..||...+...
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~--- 241 (296)
T cd05095 165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ--- 241 (296)
T ss_pred CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH---
Confidence 999999999999986543322111111224678999999888889999999999999999998 778886544321
Q ss_pred hHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 441 IFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
.............. .... ..+..++..+.+|+.+||+.||.+||++.+|++.|++
T Consensus 242 ~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 242 VIENTGEFFRDQGR-QVYL---------PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHHHHhhccc-cccC---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11111111100000 0000 0111244679999999999999999999999999874
No 173
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.3e-39 Score=314.82 Aligned_cols=244 Identities=21% Similarity=0.355 Sum_probs=199.0
Q ss_pred CceecccCceEEEEEEe-CCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 230 NRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.+.||+|++|.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++.+......++||||+++++|
T Consensus 25 ~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L 104 (296)
T cd06654 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (296)
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCH
Confidence 34579999999999996 46899999999876555667889999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.. ..+++.++..++.|++.||+|||+. +|+|+||||+|||++.++.++|+|||++.......... .
T Consensus 105 ~~~~~~-----~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~--~ 174 (296)
T cd06654 105 TDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--S 174 (296)
T ss_pred HHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccccccc--C
Confidence 999853 3578999999999999999999999 99999999999999999999999999987654322111 1
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...+++.|+|||.+.+..++.++|||||||++|+|++|+.||....... ..... .... .+ ..
T Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~--~~~~~----~~~~------~~------~~ 236 (296)
T cd06654 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--ALYLI----ATNG------TP------EL 236 (296)
T ss_pred cccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH--hHHHH----hcCC------CC------CC
Confidence 1237889999999988888999999999999999999999997544311 11000 0000 00 00
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
..+...+..+.+++.+||..||++||++.+|++
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 112235567999999999999999999999997
No 174
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.8e-39 Score=319.08 Aligned_cols=199 Identities=18% Similarity=0.327 Sum_probs=160.6
Q ss_pred CceecccCceEEEEEEeC---CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEee--CCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILP---DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD--HGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lv~e~~~ 304 (513)
.+.||+|+||.||+|... +++.||+|.+.... ....+.+|+.++++++||||+++++++.. ....++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 456799999999999864 46789999997543 23457889999999999999999999864 455789999985
Q ss_pred CCCHHHHhccCC-----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEe----cCCCCeEEeccccc
Q 010309 305 NGPLDRWLHHIP-----RGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL----DEEFGAHLMGVGLS 375 (513)
Q Consensus 305 ~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll----~~~~~~kl~Dfg~~ 375 (513)
++|.+++.... .....+++..+..++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 58888775321 1123589999999999999999999999 99999999999999 45678999999999
Q ss_pred ccCCccccc-cceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCC
Q 010309 376 KFVPWEVMQ-ERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVD 434 (513)
Q Consensus 376 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~ 434 (513)
+........ .......+|+.|+|||++.+. .++.++|||||||++|||++|++||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 876433211 111223379999999998764 58899999999999999999999997543
No 175
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.7e-39 Score=317.75 Aligned_cols=262 Identities=22% Similarity=0.361 Sum_probs=199.6
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.+.||+|+||.||++... ++..+|+|.+.... .....++.+|++++.+++||||+++++++.+++..++||||+++++
T Consensus 6 ~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~ 85 (308)
T cd06615 6 LGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 85 (308)
T ss_pred EeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCc
Confidence 446799999999999964 58889999987542 2334668899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD-KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
|.+++.. ...+++..+..++.|++.||.|||+ . +++|+||||+|||++.++.+||+|||++........
T Consensus 86 L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--- 155 (308)
T cd06615 86 LDQVLKK----AGRIPENILGKISIAVLRGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--- 155 (308)
T ss_pred HHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhhC---CEEECCCChHHEEEecCCcEEEccCCCccccccccc---
Confidence 9999964 2568999999999999999999997 5 899999999999999999999999999876533221
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcc--------------
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSH-------------- 452 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------------- 452 (513)
....++..|+|||++.+..++.++||||||+++|+|++|+.||...+..................
T Consensus 156 -~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (308)
T cd06615 156 -NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSP 234 (308)
T ss_pred -ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCcc
Confidence 12237889999999988889999999999999999999999987544322111111000000000
Q ss_pred ---cccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 453 ---RYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 453 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
...+..+..........+....+.++.+|+.+||+.||++|||+.+|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 235 RPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred chhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000111111122222356679999999999999999999999875
No 176
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=4.1e-39 Score=311.10 Aligned_cols=252 Identities=25% Similarity=0.437 Sum_probs=200.1
Q ss_pred CCceecccCceEEEEEEeCC-C---CEEEEEEeccc-chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 229 GNRLLGDSKTGGTYSGILPD-G---SRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
..+.||+|+||.||+|.... + ..||||.+... .......+..|+.+++.++||||+++++++.+++..++||||+
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 87 (269)
T cd05065 8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFM 87 (269)
T ss_pred EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecC
Confidence 45678999999999999643 3 36999999764 3334568999999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
++++|.+++... ...+++.+++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++........
T Consensus 88 ~~~~L~~~l~~~---~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 88 ENGALDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred CCCcHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 999999998642 34689999999999999999999999 999999999999999999999999999876543221
Q ss_pred cccee-ecC--cccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhccccccccc
Q 010309 384 QERTV-MAG--GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLD 459 (513)
Q Consensus 384 ~~~~~-~~~--gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (513)
..... ... .+..|+|||.+.+..++.++||||||+++|||++ |..||...+... ..... ... .
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~---~~~~i----~~~-----~- 228 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD---VINAI----EQD-----Y- 228 (269)
T ss_pred ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH---HHHHH----HcC-----C-
Confidence 11111 111 2457999999998899999999999999999887 999987654321 11111 000 0
Q ss_pred ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 460 PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
....+.+++..+.+++.+||+.+|++||++++|+..|+++
T Consensus 229 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 -------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0011123456789999999999999999999999999865
No 177
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3.3e-39 Score=318.37 Aligned_cols=264 Identities=17% Similarity=0.223 Sum_probs=194.9
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
..+.||+|+||.||+|+.. +++.||+|.++.... .....+.+|+.++++++||||+++++++..++..++||||+++
T Consensus 10 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 88 (309)
T cd07872 10 KLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK- 88 (309)
T ss_pred EEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-
Confidence 3456799999999999975 588999999975432 2335678899999999999999999999999999999999964
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++..........
T Consensus 89 ~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~- 161 (309)
T cd07872 89 DLKQYMDD---CGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY- 161 (309)
T ss_pred CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCcccc-
Confidence 88887754 234588999999999999999999999 99999999999999999999999999997643322111
Q ss_pred eeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhh--------HHhhc-ccccc
Q 010309 387 TVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWAT--------PLVQS-HRYLE 456 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~ 456 (513)
....+++.|+|||++.+ ..++.++||||||+++|+|+||++||...+............ +.... .....
T Consensus 162 -~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07872 162 -SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKN 240 (309)
T ss_pred -ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence 11237889999998865 467899999999999999999999997655432111111000 00000 00000
Q ss_pred cccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 457 LLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.-.+..............++++.+|+.+||+.||.+|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 000000000000001124567899999999999999999999987
No 178
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.2e-39 Score=311.75 Aligned_cols=251 Identities=29% Similarity=0.454 Sum_probs=198.6
Q ss_pred eecccCceEEEEEEeCC-------CCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 232 LLGDSKTGGTYSGILPD-------GSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
+||+|+||.||+|...+ +..||||.+.... ......+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 57999999999998643 2579999886543 234567899999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC-----CeEEeccccc
Q 010309 304 VNGPLDRWLHHIPR---GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF-----GAHLMGVGLS 375 (513)
Q Consensus 304 ~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~-----~~kl~Dfg~~ 375 (513)
++++|.+++..... ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++ .++|+|||++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 99999999965321 224578899999999999999999999 999999999999999877 8999999999
Q ss_pred ccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccc
Q 010309 376 KFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRY 454 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (513)
................++..|+|||++.+..++.++||||||+++|||+| |..||...+... ..... ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~---~~~~~----~~~~- 230 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE---VLQHV----TAGG- 230 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH---HHHHH----hcCC-
Confidence 76543322111112225678999999998999999999999999999998 999987543221 11100 0000
Q ss_pred cccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 455 LELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
....+...+..+.+++.+||+.+|++||++++|++.|++
T Consensus 231 ------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 231 ------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 001122346679999999999999999999999999864
No 179
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.6e-39 Score=314.00 Aligned_cols=252 Identities=26% Similarity=0.431 Sum_probs=198.4
Q ss_pred ceecccCceEEEEEEeC------CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 231 RLLGDSKTGGTYSGILP------DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
+.||+|+||.||++... ++..||+|++.... ......+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 90 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYM 90 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecC
Confidence 45699999999999863 46789999987653 233567889999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCC------------------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC
Q 010309 304 VNGPLDRWLHHIP------------------RGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 365 (513)
Q Consensus 304 ~~gsL~~~l~~~~------------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~ 365 (513)
++++|.+++.... .....+++..++.++.|++.||+|||+. +++||||||+||+++.++
T Consensus 91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~nil~~~~~ 167 (288)
T cd05050 91 AYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGENM 167 (288)
T ss_pred CCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhheEecCCC
Confidence 9999999996421 1123578899999999999999999999 999999999999999999
Q ss_pred CeEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHh
Q 010309 366 GAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEW 444 (513)
Q Consensus 366 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~ 444 (513)
.++|+|||++.................+..|+|||.+.+..++.++|||||||++|||++ |..||.+....+ ..
T Consensus 168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~---~~-- 242 (288)
T cd05050 168 VVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE---VI-- 242 (288)
T ss_pred ceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH--
Confidence 999999999876533221111111124667999999988899999999999999999998 888886543321 11
Q ss_pred hhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 445 ATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
. ........ ..+...+.++.+|+.+||+.||++|||+.||++.|++
T Consensus 243 -~-~~~~~~~~-------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 243 -Y-YVRDGNVL-------------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred -H-HHhcCCCC-------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 0 01111000 0011245679999999999999999999999999974
No 180
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.6e-39 Score=318.12 Aligned_cols=255 Identities=28% Similarity=0.471 Sum_probs=198.4
Q ss_pred CCceecccCceEEEEEEeC-CCC--EEEEEEecccc-hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeec
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGS--RVAVKRLKRSS-FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
..+.||+|+||.||+|.+. ++. .+|+|.++... ......+.+|+.++.++ +||||+++++++...+..++||||+
T Consensus 11 ~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 90 (303)
T cd05088 11 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 90 (303)
T ss_pred eeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeC
Confidence 3457899999999999964 454 46888776432 23456788999999999 8999999999999999999999999
Q ss_pred cCCCHHHHhccCCC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEec
Q 010309 304 VNGPLDRWLHHIPR------------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 371 (513)
Q Consensus 304 ~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 371 (513)
++++|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+|||++.++.+||+|
T Consensus 91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~kl~d 167 (303)
T cd05088 91 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 167 (303)
T ss_pred CCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcEEeCc
Confidence 99999999964321 123588999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhh
Q 010309 372 VGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQ 450 (513)
Q Consensus 372 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 450 (513)
||++....... .......+..|+|||++.+..++.++||||||+++|||+| |..||...+... ... ....
T Consensus 168 fg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~---~~~~ 238 (303)
T cd05088 168 FGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LYE---KLPQ 238 (303)
T ss_pred cccCcccchhh---hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH---HHH---HHhc
Confidence 99986432111 1111124667999999988889999999999999999998 999987544321 111 0000
Q ss_pred cccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCC
Q 010309 451 SHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQP 509 (513)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 509 (513)
. .. .. .+...+..+.+|+.+||+.+|++||+++++++.|+++.+.
T Consensus 239 -~-----~~-------~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 239 -G-----YR-------LE-KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred -C-----Cc-------CC-CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 0 00 00 0112345789999999999999999999999998876443
No 181
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.2e-39 Score=330.92 Aligned_cols=248 Identities=20% Similarity=0.250 Sum_probs=193.2
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
..+.||+|+||.||+|+.. +++.||+|++.+... .....+.+|+.++++++||||+++++.+.+.+..++||||++
T Consensus 5 ~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~ 84 (382)
T cd05625 5 KIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIP 84 (382)
T ss_pred EEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCC
Confidence 3457899999999999964 588999999976432 234578899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc-
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM- 383 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~- 383 (513)
+|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++........
T Consensus 85 gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 85 GGDMMSLLIR----MGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 9999999864 24688999999999999999999999 999999999999999999999999999753211000
Q ss_pred --------------------------------------------ccceeecCcccccccccccccCCCCchhhHHHHHHH
Q 010309 384 --------------------------------------------QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 419 (513)
Q Consensus 384 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvi 419 (513)
........||+.|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 000011248999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCC---H
Q 010309 420 LLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPR---M 496 (513)
Q Consensus 420 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~ 496 (513)
+|||++|++||...+.... ....... .... ........++++.++|.+|+ .+|.+|++ +
T Consensus 238 l~elltG~~Pf~~~~~~~~------~~~i~~~-------~~~~----~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~ 299 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLET------QMKVINW-------QTSL----HIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGA 299 (382)
T ss_pred HHHHHhCCCCCCCCCHHHH------HHHHHcc-------CCCc----CCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCH
Confidence 9999999999986543210 0000000 0000 01111234567889998876 59999997 7
Q ss_pred HHHHH
Q 010309 497 SHVVH 501 (513)
Q Consensus 497 ~evl~ 501 (513)
+++++
T Consensus 300 ~ei~~ 304 (382)
T cd05625 300 DEIKA 304 (382)
T ss_pred HHHhc
Confidence 77764
No 182
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.2e-38 Score=309.68 Aligned_cols=245 Identities=22% Similarity=0.370 Sum_probs=194.4
Q ss_pred CceecccCceEEEEEEe-CCCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 230 NRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.++||+|++|.||+|.. .+++.||+|.+.... ......+.+|+.++++++||||+++++.+...+..++||||+++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 85 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGS 85 (279)
T ss_pred eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCC
Confidence 45789999999999986 468899999987542 3334678899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|..+. .+++..+..++.|++.||+|||+. +|+|+||||+|||++.++.++|+|||++........
T Consensus 86 l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~---- 150 (279)
T cd06619 86 LDVYR--------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIA---- 150 (279)
T ss_pred hHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccccc----
Confidence 96542 378888999999999999999999 999999999999999999999999999976543211
Q ss_pred eecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccch-hHHhhhHHhhcccccccccccccCCC
Q 010309 388 VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQS-IFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
....++..|+|||++.+..++.++||||||+++|+|++|+.||.......... ......... +.. .
T Consensus 151 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---------~~~----~ 217 (279)
T cd06619 151 KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIV---------DED----P 217 (279)
T ss_pred cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHh---------ccC----C
Confidence 12238899999999998889999999999999999999999997533211000 000000000 000 0
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
...+....++++.+++.+||+.||++||+++++++.
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 218 PVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111122345678999999999999999999999863
No 183
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=5.1e-39 Score=313.14 Aligned_cols=248 Identities=21% Similarity=0.282 Sum_probs=197.0
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccchh---cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ---RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
..++||+|+||.||++... +++.||||.+...... ....+.+|+.++++++|+||+++++.+.+.+..++||||++
T Consensus 4 ~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05630 4 QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN 83 (285)
T ss_pred eeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecC
Confidence 3457899999999999965 5889999998754322 23457789999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++.........
T Consensus 84 g~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 158 (285)
T cd05630 84 GGDLKFHIYHM--GEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 158 (285)
T ss_pred CCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccc
Confidence 99999988642 234589999999999999999999999 9999999999999999999999999998765432211
Q ss_pred cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 385 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
....|+..|+|||++.+..++.++||||||+++|+|++|..||........... ...... ...
T Consensus 159 ---~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~---~~~~~~---------~~~-- 221 (285)
T cd05630 159 ---KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE---VERLVK---------EVQ-- 221 (285)
T ss_pred ---cCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHH---HHhhhh---------hhh--
Confidence 112389999999999988999999999999999999999999976432110000 000000 000
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPR-----MSHVVH 501 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 501 (513)
. ......++++.+|+.+||+.||++||| ++|+++
T Consensus 222 --~-~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 222 --E-EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred --h-hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0 011224456899999999999999999 888886
No 184
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=304.20 Aligned_cols=263 Identities=22% Similarity=0.369 Sum_probs=198.8
Q ss_pred cCCceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhc--CCCcEeeeeeEEeeCC----ceEEEEe
Q 010309 228 EGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL--HHPNLVAVKGCCYDHG----DRYIVYE 301 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~nIv~l~~~~~~~~----~~~lv~e 301 (513)
...+.||+|.||+||+|.+ .|+.||||++... ++..+.+|.++.+.. +|+||+.+++.-..++ .++||++
T Consensus 214 ~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTd 289 (513)
T KOG2052|consen 214 VLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTD 289 (513)
T ss_pred EEEEEecCccccceeeccc-cCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeee
Confidence 3456789999999999999 7999999999654 456788888888764 9999999998755443 4699999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCceEcCCCCCceEecCCCCeEEecccccc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDK-----VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK 376 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-----~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~ 376 (513)
|.+.|||.+||.. ..++....++++..+|.||+|||.. .+|.|.|||||+.|||+.+++.+.|+|+|+|.
T Consensus 290 YHe~GSL~DyL~r-----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv 364 (513)
T KOG2052|consen 290 YHEHGSLYDYLNR-----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 364 (513)
T ss_pred cccCCcHHHHHhh-----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence 9999999999974 5699999999999999999999943 47899999999999999999999999999998
Q ss_pred cCCcccc--ccceeecCcccccccccccccCC----C--CchhhHHHHHHHHHHHHcC----------CCCCCCCCcccc
Q 010309 377 FVPWEVM--QERTVMAGGTYGYLAPEFVYRNE----L--TTKSDVYSFGVLLLEIVSG----------RRPAQAVDSVCW 438 (513)
Q Consensus 377 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~----~--~~~sDvwSlGvil~elltg----------~~p~~~~~~~~~ 438 (513)
....... ........||.+|||||++...- + -..+||||||.|+||+.-. .+||.+..+.+
T Consensus 365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~D- 443 (513)
T KOG2052|consen 365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSD- 443 (513)
T ss_pred EecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCC-
Confidence 7654421 22223344999999999996531 1 2368999999999999852 45665543221
Q ss_pred chhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcC
Q 010309 439 QSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQ 508 (513)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 508 (513)
..++.....+-..+ +.| ..+...........+.++|+.||..+|..|.|+-.|-+.|.++.+
T Consensus 444 -Ps~eeMrkVVCv~~----~RP---~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 444 -PSFEEMRKVVCVQK----LRP---NIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred -CCHHHHhcceeecc----cCC---CCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 00111111111111 111 111222234567788999999999999999999999999988764
No 185
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=6.7e-39 Score=324.35 Aligned_cols=258 Identities=21% Similarity=0.306 Sum_probs=193.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEeccc--chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCC-----ceEEEEe
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG-----DRYIVYE 301 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~lv~e 301 (513)
.+.||+|+||.||++... +|+.||||++... .....+.+.+|+.+++.++||||+++++++...+ ..|+|||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 84 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTE 84 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEee
Confidence 456799999999999964 6899999998653 2234467889999999999999999999998776 7899999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
|+. ++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 85 ~~~-~~l~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 85 LMQ-SDLHKIIVS----PQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred ccc-cCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 995 678887743 35689999999999999999999999 9999999999999999999999999999865432
Q ss_pred ccccceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccc------
Q 010309 382 VMQERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRY------ 454 (513)
Q Consensus 382 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------ 454 (513)
..... ....+++.|+|||++.+. .++.++|||||||++|||++|+.||...+.......+ .........
T Consensus 157 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i---~~~~g~~~~~~~~~~ 232 (372)
T cd07853 157 ESKHM-TQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLI---TDLLGTPSLEAMRSA 232 (372)
T ss_pred ccccC-CCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHH---HHHcCCCCHHHHHHh
Confidence 21111 112378899999998774 4789999999999999999999999876543211111 000000000
Q ss_pred ----cc-ccc-----ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 455 ----LE-LLD-----PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 455 ----~~-~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.. +.. +..... .......++++.+||.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 233 CEGARAHILRGPHKPPSLPVL--YTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred hHHHHHHHHhCCCCCCchHHh--cccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 00 000 000000 0001123567899999999999999999999986
No 186
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.3e-39 Score=330.10 Aligned_cols=248 Identities=19% Similarity=0.212 Sum_probs=192.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||.||++... +++.||||++.+.. ....+.+.+|+++++.++||||+++++++.+.+..|+||||+++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~g 85 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPG 85 (377)
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCC
Confidence 456799999999999864 68999999986542 22345678899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc-
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ- 384 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~- 384 (513)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 86 g~L~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 86 GDLMTMLIK----YDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999999864 35689999999999999999999999 9999999999999999999999999998633210000
Q ss_pred -----------c---------------------------------ceeecCcccccccccccccCCCCchhhHHHHHHHH
Q 010309 385 -----------E---------------------------------RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLL 420 (513)
Q Consensus 385 -----------~---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil 420 (513)
. ......||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 0 00012489999999999988999999999999999
Q ss_pred HHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCC---CCHH
Q 010309 421 LEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMR---PRMS 497 (513)
Q Consensus 421 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~ 497 (513)
|||++|..||...+... .. ........ . + ........+.++.+||.+||. +|.+| +++.
T Consensus 239 ~elltG~~Pf~~~~~~~---~~---~~i~~~~~--~-----~----~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~ 300 (377)
T cd05629 239 FECLIGWPPFCSENSHE---TY---RKIINWRE--T-----L----YFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAH 300 (377)
T ss_pred hhhhcCCCCCCCCCHHH---HH---HHHHccCC--c-----c----CCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHH
Confidence 99999999997654321 10 01000000 0 0 000011245678999999997 77765 5999
Q ss_pred HHHHH
Q 010309 498 HVVHQ 502 (513)
Q Consensus 498 evl~~ 502 (513)
++++.
T Consensus 301 ~~l~h 305 (377)
T cd05629 301 EIKSH 305 (377)
T ss_pred HHhcC
Confidence 98863
No 187
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=7.6e-39 Score=308.03 Aligned_cols=248 Identities=21% Similarity=0.312 Sum_probs=197.6
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccch-----hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF-----QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
..+.||+|++|.||++... ++++||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+..++|+||
T Consensus 6 ~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 85 (263)
T cd06625 6 RGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEY 85 (263)
T ss_pred ccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEE
Confidence 3567899999999999864 589999999875421 1235688899999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~ 382 (513)
+++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 86 ~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~ 158 (263)
T cd06625 86 MPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 158 (263)
T ss_pred CCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceeccccc
Confidence 999999998864 24588999999999999999999999 99999999999999999999999999987654321
Q ss_pred cccc-eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccc
Q 010309 383 MQER-TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPL 461 (513)
Q Consensus 383 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (513)
.... .....++..|+|||++.+..++.++||||||+++|||++|+.||...+... . .........
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~----~~~~~~~~~-------- 224 (263)
T cd06625 159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA--A----IFKIATQPT-------- 224 (263)
T ss_pred cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH--H----HHHHhccCC--------
Confidence 1111 012237789999999998889999999999999999999999987543210 0 000000000
Q ss_pred ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 462 ISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
....+...+..+.+++.+||+.+|.+|||+.++++.
T Consensus 225 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 225 -----NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -----CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 001112345678999999999999999999999863
No 188
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2e-39 Score=327.00 Aligned_cols=248 Identities=19% Similarity=0.223 Sum_probs=194.0
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
..+.||+|+||.||++... +++.||+|++.+.. ......+.+|+.+++.++||||+++++++.+++..++||||++
T Consensus 47 ~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~ 126 (370)
T cd05621 47 VVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMP 126 (370)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCC
Confidence 3457899999999999975 58899999997532 2234567889999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+|+|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++.........
T Consensus 127 gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~ 198 (370)
T cd05621 127 GGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 198 (370)
T ss_pred CCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecccCCce
Confidence 9999999864 3588999999999999999999999 9999999999999999999999999999876432211
Q ss_pred cceeecCcccccccccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 385 ERTVMAGGTYGYLAPEFVYRN----ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
......||+.|+|||++.+. .++.++|||||||++|||++|+.||...+... . ..........
T Consensus 199 -~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~---~---~~~i~~~~~~------ 265 (370)
T cd05621 199 -RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG---T---YSKIMDHKNS------ 265 (370)
T ss_pred -ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH---H---HHHHHhCCcc------
Confidence 11223489999999998754 37889999999999999999999997654311 0 1111110000
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSM--RPRMSHVVHQ 502 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 502 (513)
+ ........+..+.+++.+||..+|.+ ||++.++++.
T Consensus 266 -~----~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 266 -L----NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred -c----CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0 00111234567899999999865543 8899999874
No 189
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=5.9e-39 Score=312.26 Aligned_cols=246 Identities=22% Similarity=0.351 Sum_probs=196.6
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.+.||+|+||.||+|... ++..+++|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l 89 (282)
T cd06643 10 IGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV 89 (282)
T ss_pred HhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcH
Confidence 445799999999999975 4778999999776656667889999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
..++.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......... ..
T Consensus 90 ~~~~~~---~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~--~~ 161 (282)
T cd06643 90 DAVMLE---LERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR--RD 161 (282)
T ss_pred HHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccccc--cc
Confidence 988753 235689999999999999999999999 9999999999999999999999999998765332211 11
Q ss_pred ecCcccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 389 MAGGTYGYLAPEFVY-----RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
...++..|+|||++. +..++.++|||||||++|||++|.+||...+... .. ....... .+..
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~----~~~~~~~------~~~~- 228 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR--VL----LKIAKSE------PPTL- 228 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH--HH----HHHhhcC------CCCC-
Confidence 223888999999984 3457789999999999999999999987643211 10 0000000 0000
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
..+...+.++.++|.+||+.||.+||++.++++
T Consensus 229 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 229 -----AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred -----CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011234567999999999999999999999985
No 190
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=5.2e-39 Score=313.01 Aligned_cols=263 Identities=24% Similarity=0.355 Sum_probs=200.7
Q ss_pred CcccCCceecccCceEEEEEEe-----CCCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--Cce
Q 010309 225 NFSEGNRLLGDSKTGGTYSGIL-----PDGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH--GDR 296 (513)
Q Consensus 225 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 296 (513)
.++...+.||+|+||.||++.. .++..||+|.++... ......+.+|+.+++.++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3445556789999999999984 357899999997553 33346789999999999999999999998875 567
Q ss_pred EEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccc
Q 010309 297 YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK 376 (513)
Q Consensus 297 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~ 376 (513)
++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.
T Consensus 84 ~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred EEEEEccCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccc
Confidence 9999999999999998642 23589999999999999999999999 99999999999999999999999999998
Q ss_pred cCCccccc-cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcccc--------chhHHhhhH
Q 010309 377 FVPWEVMQ-ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCW--------QSIFEWATP 447 (513)
Q Consensus 377 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~--------~~~~~~~~~ 447 (513)
........ .......++..|+|||++.+..++.++||||||+++|||+|+..|......... .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 76433211 111122367789999999888899999999999999999998776533211000 000000000
Q ss_pred HhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 448 LVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
...... ....+..++..+.+|+.+||+.||++|||+.++++.|+.+
T Consensus 238 ~~~~~~-------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 VLEEGK-------------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHcCc-------------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 000000 0011123566899999999999999999999999999875
No 191
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.2e-39 Score=316.62 Aligned_cols=257 Identities=25% Similarity=0.405 Sum_probs=200.8
Q ss_pred CCceecccCceEEEEEEeC--------CCCEEEEEEecccc-hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEE
Q 010309 229 GNRLLGDSKTGGTYSGILP--------DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYI 298 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l 298 (513)
..+.||+|+||.||++... ....||+|.++... ......+.+|+.+++++ +||||+++++++...+..++
T Consensus 16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (314)
T cd05099 16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYV 95 (314)
T ss_pred eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEE
Confidence 3456799999999999742 24579999987542 23356788999999999 69999999999999999999
Q ss_pred EEeeccCCCHHHHhccCCC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCC
Q 010309 299 VYEFVVNGPLDRWLHHIPR------------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 366 (513)
Q Consensus 299 v~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~ 366 (513)
||||+++|+|.+++..... ....+++..+..++.|++.||.|||++ +++||||||+|||++.++.
T Consensus 96 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~~~~~ 172 (314)
T cd05099 96 IVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVTEDNV 172 (314)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEcCCCc
Confidence 9999999999999965321 124588999999999999999999999 9999999999999999999
Q ss_pred eEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhh
Q 010309 367 AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWA 445 (513)
Q Consensus 367 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 445 (513)
+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||....... ....
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~~~~- 248 (314)
T cd05099 173 MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE---LFKL- 248 (314)
T ss_pred EEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH---HHHH-
Confidence 99999999986643222111111224567999999988889999999999999999999 888986544321 1111
Q ss_pred hHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcC
Q 010309 446 TPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQ 508 (513)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 508 (513)
...... .. .+..++.++.+++.+||+.||++|||+.++++.|+++..
T Consensus 249 ---~~~~~~------------~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 249 ---LREGHR------------MD-KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred ---HHcCCC------------CC-CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 111000 00 012234578899999999999999999999999987653
No 192
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.9e-39 Score=322.30 Aligned_cols=265 Identities=22% Similarity=0.308 Sum_probs=194.1
Q ss_pred HhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEeccc--chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCC----
Q 010309 222 ITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG---- 294 (513)
Q Consensus 222 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---- 294 (513)
+.++|.. .+.||+|+||.||++... +|..||||++... .......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQ-LKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEE-EEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 3445544 467899999999999864 5899999999754 2234567889999999999999999999986543
Q ss_pred --ceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecc
Q 010309 295 --DRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGV 372 (513)
Q Consensus 295 --~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 372 (513)
..++||||+++ +|...+. ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+||
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Df 167 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIH------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 167 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecC
Confidence 46999999965 6666653 3488899999999999999999999 9999999999999999999999999
Q ss_pred cccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcccc-chhHH--------
Q 010309 373 GLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCW-QSIFE-------- 443 (513)
Q Consensus 373 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~-~~~~~-------- 443 (513)
|++......... ....+|+.|+|||++.+..++.++||||||+++|+|++|+.||...+.... .....
T Consensus 168 g~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 244 (359)
T cd07876 168 GLARTACTNFMM---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAE 244 (359)
T ss_pred CCccccccCccC---CCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHH
Confidence 999765332211 112388999999999999999999999999999999999999986543210 00000
Q ss_pred ---h----hhHHhhcc-c-----ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 444 ---W----ATPLVQSH-R-----YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 444 ---~----~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. ........ . ..+........ .........++.+.+|+.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 245 FMNRLQPTVRNYVENRPQYPGISFEELFPDWIFP-SESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHHHHHHHHHhhCCCCCCcchhhhccccccc-cccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 00000000 0 00000000000 000011123467899999999999999999999997
No 193
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=7.9e-39 Score=312.26 Aligned_cols=262 Identities=19% Similarity=0.263 Sum_probs=189.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch--hcHHHHHHHHHHHhhc---CCCcEeeeeeEEeeC-----CceEE
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARL---HHPNLVAVKGCCYDH-----GDRYI 298 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~-----~~~~l 298 (513)
.+.||+|+||.||+|... +++.||+|.++.... .....+.+|+.+++.+ +||||+++++++... ...++
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~l 84 (288)
T cd07863 5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTL 84 (288)
T ss_pred eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEE
Confidence 356799999999999975 588999999875422 1234556777776665 799999999988653 44799
Q ss_pred EEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccC
Q 010309 299 VYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 378 (513)
Q Consensus 299 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~ 378 (513)
||||+. ++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 85 v~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 85 VFEHVD-QDLRTYLDKV--PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred EEcccc-cCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 999996 5898888652 234589999999999999999999999 9999999999999999999999999999866
Q ss_pred CccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccc-hhHHhhhHHhhccccccc
Q 010309 379 PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQ-SIFEWATPLVQSHRYLEL 457 (513)
Q Consensus 379 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 457 (513)
....... ...+|..|+|||++.+..++.++|||||||++|+|++|++||......... .+...... .........
T Consensus 159 ~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 234 (288)
T cd07863 159 SCQMALT---PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL-PPEDDWPRD 234 (288)
T ss_pred cCcccCC---CccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCC-CChhhCccc
Confidence 4322211 123788999999999889999999999999999999999999765432111 11110000 000000000
Q ss_pred c---cccccCCCCC---CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 458 L---DPLISSLSSD---IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 458 ~---~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. .......... ......++.+.+++.+||+.||++|||+.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 235 VTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 0000000000 001134567899999999999999999999984
No 194
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=6.5e-39 Score=309.73 Aligned_cols=254 Identities=22% Similarity=0.333 Sum_probs=190.4
Q ss_pred eecccCceEEEEEEeCC---CCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 232 LLGDSKTGGTYSGILPD---GSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.||+|+||.||+|...+ ...+|+|.+..... .....+.+|+.+++.++||||+++++.+...+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 36999999999997543 45788998765432 334578899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 308 LDRWLHHIPRG-GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 308 L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
|.+++...... ....++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++...........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 99999753321 23356788899999999999999999 999999999999999999999999999875433221111
Q ss_pred eeecCccccccccccccc-------CCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccc
Q 010309 387 TVMAGGTYGYLAPEFVYR-------NELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELL 458 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (513)
.....+++.|+|||++.. ..++.++||||||+++|||++ |..||....... . ........ .....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~---~---~~~~~~~~-~~~~~ 231 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ---V---LKQVVREQ-DIKLP 231 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH---H---HHHHhhcc-CccCC
Confidence 122225678999998743 356789999999999999999 788886543221 0 00111110 01111
Q ss_pred cccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 459 DPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
.+ ......+..+.+++..|+ .||++|||+++|++.|.
T Consensus 232 ~~--------~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 232 KP--------QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CC--------cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11 112234566788999998 59999999999999874
No 195
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2e-39 Score=311.41 Aligned_cols=239 Identities=27% Similarity=0.414 Sum_probs=189.9
Q ss_pred eecccCceEEEEEEeCC--------CCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 232 LLGDSKTGGTYSGILPD--------GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
.||+|+||.||+|.... ..+||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 47999999999998632 3358999887655455678899999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCC--------eEEeccccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG--------AHLMGVGLS 375 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~--------~kl~Dfg~~ 375 (513)
++|+|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++. ++++|||++
T Consensus 82 ~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~ 155 (258)
T cd05078 82 KFGSLDTYLKKN---KNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155 (258)
T ss_pred CCCcHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccccc
Confidence 999999999642 24689999999999999999999999 9999999999999987765 599999998
Q ss_pred ccCCccccccceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCC-CCCCCCCccccchhHHhhhHHhhccc
Q 010309 376 KFVPWEVMQERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGR-RPAQAVDSVCWQSIFEWATPLVQSHR 453 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~ 453 (513)
....... ...++..|+|||++.+ ..++.++||||||+++|||++|. .|+...+...... .... .
T Consensus 156 ~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-------~~~~-~ 221 (258)
T cd05078 156 ITVLPKE------ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-------FYED-R 221 (258)
T ss_pred cccCCch------hccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-------HHHc-c
Confidence 7553221 1227888999999976 45789999999999999999985 5555433211000 0000 0
Q ss_pred ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 454 YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
.. .+.....++.+++.+||+.||++|||++++++.|+
T Consensus 222 -------------~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 -------------HQ-LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -------------cc-CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 01122356899999999999999999999999874
No 196
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-38 Score=312.33 Aligned_cols=244 Identities=22% Similarity=0.348 Sum_probs=199.4
Q ss_pred CceecccCceEEEEEEe-CCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 230 NRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.+.||+|++|.||++.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 103 (297)
T cd06656 24 FEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 103 (297)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCH
Confidence 34679999999999996 46999999999876555567788999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.. ..+++.++..++.|++.||.|||+. +++||||||+|||++.++.++|+|||++.......... .
T Consensus 104 ~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~--~ 173 (297)
T cd06656 104 TDVVTE-----TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--S 173 (297)
T ss_pred HHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCccCc--C
Confidence 999853 4588999999999999999999999 99999999999999999999999999987654332211 1
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...+++.|+|||.+.+..++.++||||||+++|+|++|..||...+.... .. ... .......
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~--~~-------------~~~---~~~~~~~ 235 (297)
T cd06656 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LY-------------LIA---TNGTPEL 235 (297)
T ss_pred cccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh--ee-------------eec---cCCCCCC
Confidence 22378899999999988899999999999999999999999976443210 00 000 0000011
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
..+...+..+.+++.+||+.||++||++++|++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 236 QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112335567899999999999999999999997
No 197
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=8.5e-39 Score=307.57 Aligned_cols=250 Identities=27% Similarity=0.437 Sum_probs=192.8
Q ss_pred eecccCceEEEEEEeC----CCCEEEEEEeccc-chhcHHHHHHHHHHHhhcCCCcEeeeeeEEe-eCCceEEEEeeccC
Q 010309 232 LLGDSKTGGTYSGILP----DGSRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCY-DHGDRYIVYEFVVN 305 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~lv~e~~~~ 305 (513)
+||+|+||.||+|... ++..||+|.+... .....+.+.+|+.+++.++||||+++++++. .++..++||||+.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 5799999999999853 2457999998643 2344567889999999999999999999876 45567999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
++|.+++... ...+++..++.++.|++.||+|||+. +++||||||+|||++.++.+||+|||+++.........
T Consensus 82 ~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 82 GDLRNFIRSE---THNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 9999999642 23467788899999999999999999 99999999999999999999999999997654321111
Q ss_pred --ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 386 --RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSG-RRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 386 --~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
......++..|+|||.+.+..++.++||||||+++|||++| .+||...+.. +.........
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~------~~~~~~~~~~---------- 219 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF------DITVYLLQGR---------- 219 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHHhcCC----------
Confidence 11112256789999999888899999999999999999995 5566543321 1111111000
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
....+...+..+.+++.+||+.+|++||++.+|++.|+++.
T Consensus 220 ----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 220 ----RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred ----CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 00001123457999999999999999999999999998764
No 198
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=291.98 Aligned_cols=245 Identities=20% Similarity=0.336 Sum_probs=199.4
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch----hc----HHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEE
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF----QR----KKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIV 299 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~----~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv 299 (513)
.++||.|..+.|-+...+ +|..+|+|++..... .. .+.-.+|+.+|+++ -||+|+++.++++.+...++|
T Consensus 22 keilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlV 101 (411)
T KOG0599|consen 22 KEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLV 101 (411)
T ss_pred HHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhh
Confidence 457799999999888754 688999999863211 11 24457899999998 699999999999999999999
Q ss_pred EeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCC
Q 010309 300 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVP 379 (513)
Q Consensus 300 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~ 379 (513)
+|.|+.|.|.++|.. .-.+++...+.|++|+..|+.|||.. +||||||||+|||+|++.++||+|||++..+.
T Consensus 102 Fdl~prGELFDyLts----~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGFa~~l~ 174 (411)
T KOG0599|consen 102 FDLMPRGELFDYLTS----KVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGFACQLE 174 (411)
T ss_pred hhhcccchHHHHhhh----heeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccceeeccC
Confidence 999999999999964 46799999999999999999999999 99999999999999999999999999999886
Q ss_pred ccccccceeecCccccccccccccc------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccc
Q 010309 380 WEVMQERTVMAGGTYGYLAPEFVYR------NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHR 453 (513)
Q Consensus 380 ~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 453 (513)
.... ....+|||+|.|||.+.- ..|+...|+||.|||+|.|+.|.+||...... . ...++.+++
T Consensus 175 ~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm-----l--MLR~ImeGk 244 (411)
T KOG0599|consen 175 PGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM-----L--MLRMIMEGK 244 (411)
T ss_pred Cchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH-----H--HHHHHHhcc
Confidence 5433 233569999999998852 36888999999999999999999999653221 1 111222222
Q ss_pred ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 454 YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+.- ......+++..+.+||.+||+.||.+|.|++|+|.
T Consensus 245 yqF----------~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 245 YQF----------RSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred ccc----------CCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 210 22234567888999999999999999999999986
No 199
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.1e-38 Score=305.74 Aligned_cols=247 Identities=26% Similarity=0.449 Sum_probs=198.2
Q ss_pred CceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHH
Q 010309 230 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 309 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 309 (513)
.+.||+|++|.||++.+.++..+|+|.+.... .....+.+|++++++++||||+++++++......++||||+++++|.
T Consensus 9 ~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 87 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLS 87 (256)
T ss_pred EeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHH
Confidence 35679999999999998778899999987543 34567899999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceee
Q 010309 310 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 389 (513)
Q Consensus 310 ~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 389 (513)
+++... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+........... ..
T Consensus 88 ~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~-~~ 160 (256)
T cd05112 88 DYLRAQ---RGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS-TG 160 (256)
T ss_pred HHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCccccc-CC
Confidence 998642 24588999999999999999999999 999999999999999999999999999876543221111 11
Q ss_pred cCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 390 AGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 390 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
..++..|+|||.+.+..++.++||||||+++|||++ |..||....... ... ...... ....
T Consensus 161 ~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~---~~~~~~---~~~~--------- 222 (256)
T cd05112 161 TKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE---VVE---TINAGF---RLYK--------- 222 (256)
T ss_pred CccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---HHH---HHhCCC---CCCC---------
Confidence 124678999999988889999999999999999998 999987544221 111 100000 0000
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
+...+..+.+|+.+||+.+|++|||+.++++.|.
T Consensus 223 --~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 223 --PRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred --CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1113467999999999999999999999999874
No 200
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=6.7e-39 Score=307.06 Aligned_cols=246 Identities=22% Similarity=0.317 Sum_probs=198.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEeccc-chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.+.||+|+||.||++... +++.||+|.++.. .....+.+.+|+.+++.++||||+++++.+.+.+..++||||+++++
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 84 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGD 84 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCc
Confidence 457899999999999965 5889999998643 23345678899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++.. .....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||.+..........
T Consensus 85 l~~~~~~--~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~-- 157 (255)
T cd08219 85 LMQKIKL--QRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA-- 157 (255)
T ss_pred HHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccccccc--
Confidence 9998864 2234588999999999999999999999 99999999999999999999999999997664332211
Q ss_pred eecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCC
Q 010309 388 VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSS 467 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (513)
....+++.|+|||++.+..++.++|+||||+++|+|++|..||...+... . .... .....
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~---~---~~~~-~~~~~------------- 217 (255)
T cd08219 158 CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN---L---ILKV-CQGSY------------- 217 (255)
T ss_pred ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH---H---HHHH-hcCCC-------------
Confidence 11237889999999988889999999999999999999999997543211 1 1110 00000
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 468 DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 468 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
...+...+..+.+++.+||+.||++||++.+|+..
T Consensus 218 ~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 218 KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 00112345578999999999999999999999865
No 201
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.2e-39 Score=330.25 Aligned_cols=248 Identities=20% Similarity=0.235 Sum_probs=193.7
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||.||++... +++.||||++.+... .....+.+|+.+|+.++||||+++++.+.+.+..++||||+++
T Consensus 6 ~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~ 85 (376)
T cd05598 6 IKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 85 (376)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCC
Confidence 456799999999999964 589999999975422 2345688999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc--
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM-- 383 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~-- 383 (513)
|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++..+.....
T Consensus 86 g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 86 GDMMSLLIR----LGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 999999964 34688999999999999999999999 999999999999999999999999999753210000
Q ss_pred ---------------------------------------ccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHH
Q 010309 384 ---------------------------------------QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIV 424 (513)
Q Consensus 384 ---------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell 424 (513)
........||+.|+|||++.+..++.++|||||||++|||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 00001224899999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCC---CHHHHHH
Q 010309 425 SGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRP---RMSHVVH 501 (513)
Q Consensus 425 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~evl~ 501 (513)
+|+.||.......... ...... ... ........++++.++|.+|+ .+|.+|+ ++.++++
T Consensus 239 ~G~~Pf~~~~~~~~~~------~i~~~~-------~~~----~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 239 VGQPPFLADTPAETQL------KVINWE-------TTL----HIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred hCCCCCCCCCHHHHHH------HHhccC-------ccc----cCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 9999998655321110 000000 000 00111224566888999876 5999999 8888885
Q ss_pred H
Q 010309 502 Q 502 (513)
Q Consensus 502 ~ 502 (513)
.
T Consensus 301 h 301 (376)
T cd05598 301 H 301 (376)
T ss_pred C
Confidence 3
No 202
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.3e-39 Score=319.30 Aligned_cols=237 Identities=23% Similarity=0.306 Sum_probs=189.8
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcC-CCcEeeeeeEEeeCCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLH-HPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
.++||+|+||.||++... +|+.||+|++.+.. ....+.+..|..++..+. |++|+++++++.+.+..|+||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~ 84 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVN 84 (323)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCC
Confidence 357899999999999965 58999999997642 223356778888888885 5788889999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.........
T Consensus 85 ~g~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~ 157 (323)
T cd05615 85 GGDLMYHIQQ----VGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT 157 (323)
T ss_pred CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCCCcc
Confidence 9999998854 34689999999999999999999999 9999999999999999999999999998754322211
Q ss_pred cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 385 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+... ... .... ..
T Consensus 158 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~~---~i~~-~~----------- 217 (323)
T cd05615 158 --TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE---LFQ---SIME-HN----------- 217 (323)
T ss_pred --ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH---HHH---HHHh-CC-----------
Confidence 122338999999999998899999999999999999999999997654321 111 1000 00
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRM 496 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 496 (513)
...+...+.++.+++.+||+.||.+|++.
T Consensus 218 ---~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 218 ---VSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 00112245678999999999999999985
No 203
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.9e-39 Score=325.68 Aligned_cols=261 Identities=18% Similarity=0.214 Sum_probs=196.1
Q ss_pred ccCCceecccCceEEEEEEeC---CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 227 SEGNRLLGDSKTGGTYSGILP---DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
+...+.||+|+||.||++... .+..||+|.+... ....+|+.+|++++||||+++++++......++|||++
T Consensus 94 y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 168 (392)
T PHA03207 94 YNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKY 168 (392)
T ss_pred eEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhc
Confidence 344567799999999999753 3678999988643 23568999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
. ++|.+++.. ...+++..++.++.||+.||.|||+. +|+||||||+|||++.++.++|+|||++........
T Consensus 169 ~-~~l~~~l~~----~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 169 K-CDLFTYVDR----SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred C-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 5 688888842 35689999999999999999999999 999999999999999999999999999976654332
Q ss_pred ccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccc----------
Q 010309 384 QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHR---------- 453 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------- 453 (513)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.....................
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~ 320 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTN 320 (392)
T ss_pred cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchh
Confidence 2222233489999999999999999999999999999999999999976543221111111111000000
Q ss_pred -------ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 454 -------YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 454 -------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+.....+.. ...........+.++.++|.+||..||++|||+.|++.
T Consensus 321 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 321 LCKHFKQYAIVLRPPY-TIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred HHHHHHhhcccccCCc-cccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000000 00000001123457889999999999999999999986
No 204
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-41 Score=304.16 Aligned_cols=241 Identities=23% Similarity=0.373 Sum_probs=204.4
Q ss_pred ecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHHH
Q 010309 233 LGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 311 (513)
Q Consensus 233 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 311 (513)
||+|+||.||+|.++ .|..||||.+.-. .+.+++.+|+.+++++..|++|++||.+.....+++|||||..|+..+.
T Consensus 41 LGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI 118 (502)
T KOG0574|consen 41 LGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDI 118 (502)
T ss_pred hcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHH
Confidence 599999999999975 5999999999765 4678899999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeecC
Q 010309 312 LHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG 391 (513)
Q Consensus 312 l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 391 (513)
++. .++++++.++..+++..++||+|||.. .-+|||||+.|||++.+|.+||+|||.+-.+........ ...
T Consensus 119 ~R~---R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRN--TVI 190 (502)
T KOG0574|consen 119 MRA---RRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRN--TVI 190 (502)
T ss_pred HHH---hcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhC--ccc
Confidence 974 347899999999999999999999999 899999999999999999999999999987765433222 233
Q ss_pred cccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCc
Q 010309 392 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPE 471 (513)
Q Consensus 392 gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (513)
||+.|||||++..-.|+.++||||||++..||..|++||.+..+.. .++ +-+. ...+....+
T Consensus 191 GTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR--AIF---------------MIPT-~PPPTF~KP 252 (502)
T KOG0574|consen 191 GTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR--AIF---------------MIPT-KPPPTFKKP 252 (502)
T ss_pred cCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc--eeE---------------eccC-CCCCCCCCh
Confidence 9999999999999999999999999999999999999998765431 000 0000 000111224
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 472 AGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 472 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
...+.++.+++++||-.+|++|-|+.++++
T Consensus 253 E~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 253 EEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred HhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 567888999999999999999999999886
No 205
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.2e-38 Score=307.59 Aligned_cols=251 Identities=25% Similarity=0.401 Sum_probs=199.7
Q ss_pred CceecccCceEEEEEEeC----CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILP----DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
.+.||+|+||.||+|... .+..+|+|.++... ....+.+.+|+.++++++||||+++++++..++..++||||++
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYME 88 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCC
Confidence 457899999999999863 23479999987543 2335678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+++|.+++... ...+++.++..++.|++.||+|||+. +++|+||||+|||++.++.++|+|||++.........
T Consensus 89 ~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd05066 89 NGSLDAFLRKH---DGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 162 (267)
T ss_pred CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccccccce
Confidence 99999999642 24589999999999999999999999 9999999999999999999999999999876543221
Q ss_pred cce-eecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 385 ERT-VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 385 ~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
... ....++..|+|||.+.+..++.++||||||+++||+++ |..||....... ..... .. . ..
T Consensus 163 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~~~---~~-~-----~~--- 227 (267)
T cd05066 163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIKAI---EE-G-----YR--- 227 (267)
T ss_pred eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHHHH---hC-C-----Cc---
Confidence 111 11113568999999998889999999999999999887 999987654321 11100 00 0 00
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
.......++.+.+++.+||+.+|.+||++.++++.|+++
T Consensus 228 -----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 -----LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -----CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 001122456789999999999999999999999999875
No 206
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5e-39 Score=321.54 Aligned_cols=260 Identities=27% Similarity=0.366 Sum_probs=198.7
Q ss_pred ccCCceecccCceEEEEEEe------CCCCEEEEEEecccc-hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeC-CceE
Q 010309 227 SEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRSS-FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDH-GDRY 297 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~-~~~~ 297 (513)
+...+.||+|+||.||+|.. .+++.||||+++... ......+.+|+.++.++ +||||+++++++... ...+
T Consensus 9 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~ 88 (343)
T cd05103 9 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 88 (343)
T ss_pred hcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceE
Confidence 34456789999999999973 347899999997643 23346788999999999 789999999988654 4678
Q ss_pred EEEeeccCCCHHHHhccCCC------------------------------------------------------------
Q 010309 298 IVYEFVVNGPLDRWLHHIPR------------------------------------------------------------ 317 (513)
Q Consensus 298 lv~e~~~~gsL~~~l~~~~~------------------------------------------------------------ 317 (513)
+||||+++|+|.+++.....
T Consensus 89 lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (343)
T cd05103 89 VIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQ 168 (343)
T ss_pred EEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhh
Confidence 99999999999999864211
Q ss_pred ---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeecCccc
Q 010309 318 ---GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY 394 (513)
Q Consensus 318 ---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~ 394 (513)
....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++................++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd05103 169 EDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 245 (343)
T ss_pred hhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCc
Confidence 012467888899999999999999999 99999999999999999999999999998653322111111222567
Q ss_pred ccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHH
Q 010309 395 GYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAG 473 (513)
Q Consensus 395 ~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (513)
.|+|||.+.+..++.++||||||+++|+|++ |..||....... ... .. ...... ... +..
T Consensus 246 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~---~~-~~~~~~------------~~~-~~~ 306 (343)
T cd05103 246 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFC---RR-LKEGTR------------MRA-PDY 306 (343)
T ss_pred ceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH--HHH---HH-HhccCC------------CCC-CCC
Confidence 8999999988889999999999999999997 999986543210 010 00 110000 000 111
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcC
Q 010309 474 VVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQ 508 (513)
Q Consensus 474 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 508 (513)
.++++.+++.+||+.||++|||+.+|++.|+.+.+
T Consensus 307 ~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 307 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 34568999999999999999999999999988754
No 207
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=7.3e-39 Score=342.95 Aligned_cols=258 Identities=22% Similarity=0.298 Sum_probs=200.1
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
..+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 6 Ii~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~e 85 (932)
T PRK13184 6 IIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIE 85 (932)
T ss_pred EEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCC
Confidence 3457799999999999975 589999999975422 234678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccccccc
Q 010309 305 NGPLDRWLHHIPR-------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF 377 (513)
Q Consensus 305 ~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~ 377 (513)
+++|.+++..... ....+++..++.++.||+.||+|||+. +|+||||||+|||++.++.++|+|||++..
T Consensus 86 GGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFGLAk~ 162 (932)
T PRK13184 86 GYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGAAIF 162 (932)
T ss_pred CCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecCccee
Confidence 9999999864211 123456778899999999999999999 999999999999999999999999999986
Q ss_pred CCccccc----------------cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchh
Q 010309 378 VPWEVMQ----------------ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSI 441 (513)
Q Consensus 378 ~~~~~~~----------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~ 441 (513)
....... .......||+.|+|||++.+..++.++|||||||++|||+||..||...+.....
T Consensus 163 i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~-- 240 (932)
T PRK13184 163 KKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS-- 240 (932)
T ss_pred cccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh--
Confidence 6211100 0011124899999999999999999999999999999999999999764321100
Q ss_pred HHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHhcCc
Q 010309 442 FEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRP-RMSHVVHQLQQLA 507 (513)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~ 507 (513)
... ....+. ...+....++.+.+++.+||+.||++|| +++++++.|+...
T Consensus 241 --------~~~---~i~~P~-----~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 241 --------YRD---VILSPI-----EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred --------hhh---hccChh-----hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 000 000000 0011124556789999999999999995 6777877776653
No 208
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1e-38 Score=311.11 Aligned_cols=247 Identities=20% Similarity=0.271 Sum_probs=195.8
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchh---cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ---RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.++||+|+||+||++... +++.||+|.+...... ....+.+|+.+++.++|+||+++.+.+..++..++||||+++
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05632 5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNG 84 (285)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccC
Confidence 356899999999999874 6889999999754322 234578899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++.........
T Consensus 85 ~~L~~~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~- 158 (285)
T cd05632 85 GDLKFHIYNM--GNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESI- 158 (285)
T ss_pred ccHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcc-
Confidence 9999888642 234699999999999999999999999 9999999999999999999999999998765432211
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
....|+..|+|||++.+..++.++|+||||+++|||++|..||........... ...... ...
T Consensus 159 --~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~---~~~~~~-----~~~------- 221 (285)
T cd05632 159 --RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREE---VDRRVL-----ETE------- 221 (285)
T ss_pred --cCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHhhh-----ccc-------
Confidence 122389999999999888899999999999999999999999976543211000 000000 000
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHH
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRPR-----MSHVVH 501 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 501 (513)
.......+..+.+|+.+||+.||++||+ +.++++
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 222 --EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred --cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 0011234556899999999999999999 667665
No 209
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.5e-38 Score=311.46 Aligned_cols=244 Identities=23% Similarity=0.373 Sum_probs=199.6
Q ss_pred CceecccCceEEEEEEe-CCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 230 NRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.+.||.|++|.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++|+||+++++|
T Consensus 24 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 103 (296)
T cd06655 24 YEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSL 103 (296)
T ss_pred EEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcH
Confidence 34679999999999986 46899999999766555567889999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.. ..+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.......... .
T Consensus 104 ~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~--~ 173 (296)
T cd06655 104 TDVVTE-----TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKR--S 173 (296)
T ss_pred HHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccccC--C
Confidence 998853 3589999999999999999999999 99999999999999999999999999987654332211 1
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...++..|+|||.+.+..++.++|||||||++|+|++|+.||...+.... .. .... .. .+ ..
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~--~~----~~~~-~~-----~~------~~ 235 (296)
T cd06655 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LY----LIAT-NG-----TP------EL 235 (296)
T ss_pred CcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HH----HHHh-cC-----Cc------cc
Confidence 22378899999999888899999999999999999999999976543210 00 0000 00 00 00
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
..+...++.+.++|.+||..||++||++.+|++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 236 QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 112234567899999999999999999999986
No 210
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-40 Score=324.70 Aligned_cols=246 Identities=23% Similarity=0.347 Sum_probs=202.6
Q ss_pred CceecccCceEEEEEEeCC-CCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 230 NRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
..+||+|.||+||.|++.+ ...+|||-+........+.+..|+.+.++|+|.|||+++|.+.+++.+-|.||.++||+|
T Consensus 580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred eEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 3478999999999999754 567999999888777778899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEec-CCCCeEEecccccccCCcccccc
Q 010309 309 DRWLHHIPRGGRSL--DWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD-EEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 309 ~~~l~~~~~~~~~l--~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~-~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
.++|+..- +++ ++..+-.+.+||++||.|||++ .|||||||-+|||++ -.|.+||+|||.++.+..-..-.
T Consensus 660 SsLLrskW---GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~T 733 (1226)
T KOG4279|consen 660 SSLLRSKW---GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCT 733 (1226)
T ss_pred HHHHHhcc---CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCccc
Confidence 99997532 445 7888889999999999999999 999999999999995 56789999999999876433222
Q ss_pred ceeecCcccccccccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 386 RTVMAGGTYGYLAPEFVYRN--ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
. ...||..|||||++..+ .|+.++|||||||++.||.||++||-...... ..++. --.-
T Consensus 734 E--TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq-AAMFk----------------VGmy 794 (1226)
T KOG4279|consen 734 E--TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ-AAMFK----------------VGMY 794 (1226)
T ss_pred c--ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh-Hhhhh----------------hcce
Confidence 2 23399999999999875 58899999999999999999999997543320 00000 0000
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.. -...+...+.+...+|.+|+.+||.+||++.++|+
T Consensus 795 Kv-HP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 795 KV-HPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ec-CCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 00 11224578889999999999999999999999986
No 211
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=9.6e-39 Score=308.43 Aligned_cols=254 Identities=22% Similarity=0.353 Sum_probs=190.4
Q ss_pred eecccCceEEEEEEeCCC---CEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 232 LLGDSKTGGTYSGILPDG---SRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.||+|+||.||+|...++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++.+.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 479999999999985443 356677776543 3345789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++.........+++..+..++.||+.||+|||+. +++||||||+|||++.++.++|+|||++............
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 9999975433334577788899999999999999999 9999999999999999999999999998643222111111
Q ss_pred eecCccccccccccccc-------CCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhccccccccc
Q 010309 388 VMAGGTYGYLAPEFVYR-------NELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLD 459 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (513)
....++..|+|||++.. ..++.++||||||+++|||++ |..||...+.. ... ..... .......+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~---~~~---~~~~~-~~~~~~~~ 231 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR---EVL---NHVIK-DQQVKLFK 231 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH---HHH---HHHHh-hcccccCC
Confidence 12337889999998753 245789999999999999997 56787654321 111 11111 11111222
Q ss_pred ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 460 PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
+.+ ....++.+.+++..|| .+|++||++++|++.|.
T Consensus 232 ~~~--------~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 232 PQL--------ELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred Ccc--------CCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 221 1124457888999999 67999999999999875
No 212
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=8.4e-39 Score=309.13 Aligned_cols=252 Identities=28% Similarity=0.393 Sum_probs=199.9
Q ss_pred CCceecccCceEEEEEEeCC----CCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 229 GNRLLGDSKTGGTYSGILPD----GSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
..+.||+|++|.||+|...+ ...||||...... ....+.+.+|+.++++++||||+++++++.+ +..++||||+
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~ 88 (270)
T cd05056 10 LGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELA 88 (270)
T ss_pred eeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcC
Confidence 34678999999999998643 3479999987654 3455689999999999999999999998875 5678999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
++++|.+++... ...+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 89 ~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 162 (270)
T cd05056 89 PLGELRSYLQVN---KYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY 162 (270)
T ss_pred CCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecccccc
Confidence 999999999642 24589999999999999999999999 999999999999999999999999999986644322
Q ss_pred ccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 384 QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
.... ...++..|+|||.+....++.++||||||+++|||++ |..||...+.... .. .......
T Consensus 163 ~~~~-~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~---~~---~~~~~~~--------- 226 (270)
T cd05056 163 YKAS-KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV---IG---RIENGER--------- 226 (270)
T ss_pred eecC-CCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH---HH---HHHcCCc---------
Confidence 1111 1124568999999988889999999999999999996 9999976543211 00 0000000
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcC
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQ 508 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 508 (513)
. ..+...+..+.+++.+|+..+|++|||+.++++.|+++..
T Consensus 227 ----~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 227 ----L-PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred ----C-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0 0112345679999999999999999999999999988754
No 213
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=9.5e-39 Score=308.99 Aligned_cols=244 Identities=23% Similarity=0.381 Sum_probs=192.3
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeC------CceEEEEee
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDH------GDRYIVYEF 302 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~------~~~~lv~e~ 302 (513)
+.||+|+||.||+|... +++.||+|++.... .....+.+|+.++.++ +||||+++++++... ...++||||
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~ 90 (272)
T cd06637 12 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 90 (272)
T ss_pred HheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEc
Confidence 45799999999999964 58899999987553 3456788999999998 799999999998753 357999999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~ 382 (513)
+++++|.+++... ....+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+|||++.......
T Consensus 91 ~~~~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~ 165 (272)
T cd06637 91 CGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 165 (272)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCceeccccc
Confidence 9999999998752 234689999999999999999999999 99999999999999999999999999998654322
Q ss_pred cccceeecCcccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccc
Q 010309 383 MQERTVMAGGTYGYLAPEFVY-----RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLEL 457 (513)
Q Consensus 383 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (513)
.. .....|++.|+|||++. +..++.++|||||||++|||++|..||......... . . ....
T Consensus 166 ~~--~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~-----~-~-~~~~----- 231 (272)
T cd06637 166 GR--RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL-----F-L-IPRN----- 231 (272)
T ss_pred cc--CCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH-----H-H-HhcC-----
Confidence 11 12233888999999986 335788999999999999999999999654321100 0 0 0000
Q ss_pred ccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 458 LDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.. ........+..+.+|+.+||+.||.+|||+.++++
T Consensus 232 ~~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 232 PA-------PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CC-------CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 00 11111234567999999999999999999999975
No 214
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.5e-38 Score=305.16 Aligned_cols=237 Identities=27% Similarity=0.441 Sum_probs=189.9
Q ss_pred eecccCceEEEEEEeCCCC-----------EEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEE
Q 010309 232 LLGDSKTGGTYSGILPDGS-----------RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVY 300 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 300 (513)
.||+|+||.||+|...+.. .|++|.+...... ...+.+|+.++++++||||+++++++.. ...++||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 5799999999999975432 5888887655433 6788999999999999999999999988 7889999
Q ss_pred eeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC-------CeEEeccc
Q 010309 301 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF-------GAHLMGVG 373 (513)
Q Consensus 301 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~-------~~kl~Dfg 373 (513)
||+++|+|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 80 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 80 EYVKFGPLDVFLHRE---KNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred EcCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCC
Confidence 999999999999752 22689999999999999999999999 999999999999999887 79999999
Q ss_pred ccccCCccccccceeecCcccccccccccccC--CCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhh
Q 010309 374 LSKFVPWEVMQERTVMAGGTYGYLAPEFVYRN--ELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQ 450 (513)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 450 (513)
++....... ...++..|+|||++... .++.++||||||+++|||++ |..|+...+........ .
T Consensus 154 ~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~-------~ 220 (259)
T cd05037 154 IPITVLSRE------ERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFY-------Q 220 (259)
T ss_pred ccccccccc------ccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHH-------h
Confidence 998654311 12266789999999876 78999999999999999999 57777655322111110 0
Q ss_pred cccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 451 SHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
.. ... . .+ ....+.+++.+||..+|.+|||+.+|++.|+
T Consensus 221 ~~-------~~~----~-~~---~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 DQ-------HRL----P-MP---DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred cC-------CCC----C-CC---CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 000 0 00 1157899999999999999999999999874
No 215
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=298.18 Aligned_cols=263 Identities=21% Similarity=0.347 Sum_probs=208.5
Q ss_pred HHHHHHHhhCcccCCceecccCceEEEEEE-eCCCCEEEEEEecccchhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeC
Q 010309 216 TEELRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDH 293 (513)
Q Consensus 216 ~~~l~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 293 (513)
++++-.++. ++||+|+++.|-.++ +.+|..+|||++.+.....+..+.+|++++.+. .|+||++++++|+++
T Consensus 75 F~d~YkLt~------e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 75 FEDMYKLTS------ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred HHHHHHhHH------HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 566666663 468999999999887 568999999999988777889999999999999 599999999999999
Q ss_pred CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCC---eEEe
Q 010309 294 GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG---AHLM 370 (513)
Q Consensus 294 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~---~kl~ 370 (513)
..+|||||.|.||+|..+|.+ .+.+++.++..+.++|+.||.|||.+ ||.||||||+|||...... +||+
T Consensus 149 ~~FYLVfEKm~GGplLshI~~----~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiC 221 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQK----RKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKIC 221 (463)
T ss_pred ceEEEEEecccCchHHHHHHH----hhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeee
Confidence 999999999999999999864 46799999999999999999999999 9999999999999976544 7999
Q ss_pred cccccccCCcc-----ccccceeecCcccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccc--c
Q 010309 371 GVGLSKFVPWE-----VMQERTVMAGGTYGYLAPEFVY-----RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVC--W 438 (513)
Q Consensus 371 Dfg~~~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~--~ 438 (513)
||.+..-.... ........++|+..|||||+.. ...|+.++|.||||||||-|++|.+||.+.-..+ |
T Consensus 222 DfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGW 301 (463)
T KOG0607|consen 222 DFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGW 301 (463)
T ss_pred ccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCc
Confidence 99987644221 1222334456889999999864 2357899999999999999999999998764321 1
Q ss_pred c---hhHHhhh---HHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 439 Q---SIFEWAT---PLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 439 ~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. .-..... .-++++.+ ++ ++.....++.+..++|..+|..||..|.++.++++
T Consensus 302 drGe~Cr~CQ~~LFesIQEGkY-eF---------PdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 302 DRGEVCRVCQNKLFESIQEGKY-EF---------PDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred cCCCccHHHHHHHHHHHhccCC-cC---------ChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 0 0000000 01111111 00 22234568899999999999999999999999886
No 216
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1e-38 Score=310.04 Aligned_cols=254 Identities=22% Similarity=0.387 Sum_probs=201.4
Q ss_pred CceecccCceEEEEEEeCC-CC----EEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 230 NRLLGDSKTGGTYSGILPD-GS----RVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~-~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
.+.||+|+||.||+|...+ |. .||+|.+..... .....+.+|+.++++++||||+++++++.. ...++||||+
T Consensus 12 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 90 (279)
T cd05057 12 IKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLM 90 (279)
T ss_pred cceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecC
Confidence 4578999999999998643 33 699998876543 345678899999999999999999999887 7889999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
++|+|.+++.. ....+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||+++.......
T Consensus 91 ~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~ 164 (279)
T cd05057 91 PLGCLLDYVRN---HKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK 164 (279)
T ss_pred CCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccccCccc
Confidence 99999999864 234589999999999999999999998 999999999999999999999999999987653322
Q ss_pred ccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 384 QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
........++..|+|||.+....++.++||||||+++||+++ |+.||.......... ......
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-------~~~~~~--------- 228 (279)
T cd05057 165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPD-------LLEKGE--------- 228 (279)
T ss_pred ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHH-------HHhCCC---------
Confidence 111111114568999999988889999999999999999999 999997654321111 111000
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCCC
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQPP 510 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 510 (513)
....+...+..+.+++.+||..||++||++.++++.|+++...|
T Consensus 229 ----~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 229 ----RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred ----CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 00011123456889999999999999999999999999876554
No 217
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.3e-38 Score=307.27 Aligned_cols=246 Identities=21% Similarity=0.304 Sum_probs=195.2
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHH
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 309 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 309 (513)
+.||+|+||.||+|... +++.||+|.++.........+.+|+.+++.++||||+++++.+...+..++||||+++++|.
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQ 94 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHH
Confidence 45799999999999864 58899999997665445567889999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceee
Q 010309 310 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 389 (513)
Q Consensus 310 ~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 389 (513)
+++.. ...+++.+++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......... ...
T Consensus 95 ~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~--~~~ 165 (267)
T cd06645 95 DIYHV----TGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK--RKS 165 (267)
T ss_pred HHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcccc--ccc
Confidence 99854 34689999999999999999999999 9999999999999999999999999998765432111 112
Q ss_pred cCcccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 390 AGGTYGYLAPEFVY---RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 390 ~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
..|+..|+|||++. ...++.++|||||||++|+|++|..||....... .... .... ....+...
T Consensus 166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~--~~~~-----~~~~---~~~~~~~~--- 232 (267)
T cd06645 166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR--ALFL-----MTKS---NFQPPKLK--- 232 (267)
T ss_pred ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh--hHHh-----hhcc---CCCCCccc---
Confidence 23889999999874 4567889999999999999999999986543211 0000 0000 00001000
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.....+..+.+++.+||+.+|++||++++|++
T Consensus 233 ---~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 233 ---DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ---ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 01123456899999999999999999999875
No 218
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.8e-38 Score=315.60 Aligned_cols=264 Identities=18% Similarity=0.250 Sum_probs=193.4
Q ss_pred ceeccc--CceEEEEEEe-CCCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 231 RLLGDS--KTGGTYSGIL-PDGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 231 ~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+||+| +|++||++.. .+|+.||||++.... ......+.+|+.+++.++||||+++++++..++..++||||+++
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 83 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 83 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCC
Confidence 467999 7899999986 468999999997642 22345678899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc-
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ- 384 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~- 384 (513)
|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.++++||+...........
T Consensus 84 ~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 84 GSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 99999986422 24589999999999999999999999 9999999999999999999999999865433211100
Q ss_pred ----cceeecCccccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhh----c---
Q 010309 385 ----ERTVMAGGTYGYLAPEFVYR--NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQ----S--- 451 (513)
Q Consensus 385 ----~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~----~--- 451 (513)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||........ .......... .
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH--HHHHhcCCccccccccch
Confidence 00111226778999999976 4588999999999999999999999975432210 0000000000 0
Q ss_pred --cc-------------ccc--c---ccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 452 --HR-------------YLE--L---LDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 452 --~~-------------~~~--~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.. ..+ . ..+..............++.+.+|+.+||+.||++|||+++|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 00 000 0 00000000001112245678999999999999999999999986
No 219
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.7e-38 Score=302.86 Aligned_cols=244 Identities=24% Similarity=0.381 Sum_probs=199.2
Q ss_pred CceecccCceEEEEEEeCC-CCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 230 NRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.+.||+|++|.||+|...+ ++.||+|.+..... .+++.+|++++++++||||+++++.+.+....++++||+++++|
T Consensus 8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L 85 (256)
T cd06612 8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSV 85 (256)
T ss_pred hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcH
Confidence 4457999999999999765 88999999976532 67899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......... ..
T Consensus 86 ~~~l~~---~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~--~~ 157 (256)
T cd06612 86 SDIMKI---TNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK--RN 157 (256)
T ss_pred HHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCccc--cc
Confidence 999863 235689999999999999999999999 9999999999999999999999999999876543211 11
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...++..|+|||++.+..++.++||||||+++|+|++|+.||........ ... .. ....+ ..
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~--~~~-----~~-----~~~~~------~~ 219 (256)
T cd06612 158 TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA--IFM-----IP-----NKPPP------TL 219 (256)
T ss_pred cccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh--hhh-----hc-----cCCCC------CC
Confidence 22278899999999888899999999999999999999999976433210 000 00 00000 01
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
..+...+..+.+++.+||+.||++|||+.+|++
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 220 SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 112235567999999999999999999999985
No 220
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.1e-38 Score=308.77 Aligned_cols=246 Identities=23% Similarity=0.348 Sum_probs=196.5
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.+.||+|+||.||+|... ++..||+|.+........+.+.+|+.+++.++||||+++++.+..++..++||||+++++|
T Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 96 (292)
T cd06644 17 IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAV 96 (292)
T ss_pred hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcH
Confidence 445799999999999975 4899999999877666677889999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
..++.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.......... .
T Consensus 97 ~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~--~ 168 (292)
T cd06644 97 DAIMLE---LDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRR--D 168 (292)
T ss_pred HHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccccccc--c
Confidence 888753 234689999999999999999999999 99999999999999999999999999987543221111 1
Q ss_pred ecCcccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 389 MAGGTYGYLAPEFVY-----RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
...+++.|+|||++. ...++.++||||||+++|||++|..||...+... ........ ..+
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~------~~~--- 233 (292)
T cd06644 169 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAKS------EPP--- 233 (292)
T ss_pred eecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH------HHHHHhcC------CCc---
Confidence 223788999999985 3446789999999999999999999987543210 00000000 000
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....+...+.++.+++.+||+.||++||+++++++
T Consensus 234 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 234 ---TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ---cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00112234567899999999999999999999986
No 221
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.9e-38 Score=306.34 Aligned_cols=245 Identities=22% Similarity=0.312 Sum_probs=194.5
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHH
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 309 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 309 (513)
.+||+|+||.||+|... ++..||+|.+........+.+.+|+.+++.++|+||+++++++..++..++|+||+++++|.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS 93 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence 46799999999999964 57889999998776666778999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecC-CCCeEEecccccccCCccccccc
Q 010309 310 RWLHHIPRGGRSL--DWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE-EFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 310 ~~l~~~~~~~~~l--~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+++... ...+ ++..+..++.|++.||+|||+. +|+||||||+||+++. ++.++|+|||.+.........
T Consensus 94 ~~l~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~-- 165 (268)
T cd06624 94 ALLRSK---WGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPC-- 165 (268)
T ss_pred HHHHHh---cccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCc--
Confidence 998642 1234 7888999999999999999999 9999999999999976 678999999998765432211
Q ss_pred eeecCcccccccccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 387 TVMAGGTYGYLAPEFVYRNE--LTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
.....+++.|+|||++.... ++.++||||||+++|+|++|..||........ ..+.... ....
T Consensus 166 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~---~~~~~~~----------~~~~-- 230 (268)
T cd06624 166 TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA---AMFKVGM----------FKIH-- 230 (268)
T ss_pred cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh---hHhhhhh----------hccC--
Confidence 11123788999999986643 78899999999999999999999865432110 0000000 0000
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.. .+...++++.+++.+||+.+|++|||+.++++
T Consensus 231 --~~-~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 231 --PE-IPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred --CC-CCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 11 12235567999999999999999999999985
No 222
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2e-38 Score=307.25 Aligned_cols=253 Identities=26% Similarity=0.383 Sum_probs=198.4
Q ss_pred CceecccCceEEEEEEeC------CCCEEEEEEecccchh-cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 230 NRLLGDSKTGGTYSGILP------DGSRVAVKRLKRSSFQ-RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
.+.||+|+||.||+|+.+ +.+.|++|.+...... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 89 (275)
T cd05046 10 ITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEY 89 (275)
T ss_pred eeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEe
Confidence 346799999999999964 2467999998765433 356799999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccccccc
Q 010309 303 VVNGPLDRWLHHIPRG-----GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF 377 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~ 377 (513)
+++++|.+++...... ...+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+|||++..
T Consensus 90 ~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~~~~~~ 166 (275)
T cd05046 90 TDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLLSLSKD 166 (275)
T ss_pred cCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcccccccc
Confidence 9999999999753311 12689999999999999999999999 999999999999999999999999999875
Q ss_pred CCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccc
Q 010309 378 VPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLE 456 (513)
Q Consensus 378 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (513)
........ .....++..|+|||.+.+..++.++||||||+++|+|++ |..||....... .... .......
T Consensus 167 ~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~---~~~~----~~~~~~~- 237 (275)
T cd05046 167 VYNSEYYK-LRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE---VLNR----LQAGKLE- 237 (275)
T ss_pred cCcccccc-cCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH---HHHH----HHcCCcC-
Confidence 43222111 111125678999999988888999999999999999999 888886543221 1110 0000000
Q ss_pred cccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 457 LLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
.......+..+.+++.+||+.+|++|||+.++++.|.+
T Consensus 238 -----------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 238 -----------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred -----------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 00011244579999999999999999999999998863
No 223
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-38 Score=317.31 Aligned_cols=257 Identities=26% Similarity=0.399 Sum_probs=201.3
Q ss_pred cCCceecccCceEEEEEEeC--------CCCEEEEEEecccc-hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceE
Q 010309 228 EGNRLLGDSKTGGTYSGILP--------DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRY 297 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 297 (513)
...+.||+|+||.||++... .+..||+|.++... ....+.+.+|+.+++++ +||||+++++++...+..+
T Consensus 15 ~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 94 (334)
T cd05100 15 TLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 94 (334)
T ss_pred eecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceE
Confidence 44567899999999999742 12369999887542 23456789999999999 8999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCCC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC
Q 010309 298 IVYEFVVNGPLDRWLHHIPR------------GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 365 (513)
Q Consensus 298 lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~ 365 (513)
++|||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+|||++.++
T Consensus 95 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~~~~ 171 (334)
T cd05100 95 VLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVTEDN 171 (334)
T ss_pred EEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCC
Confidence 99999999999999865321 224588899999999999999999999 999999999999999999
Q ss_pred CeEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHh
Q 010309 366 GAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEW 444 (513)
Q Consensus 366 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~ 444 (513)
.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||...+.... .
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---~-- 246 (334)
T cd05100 172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL---F-- 246 (334)
T ss_pred cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH---H--
Confidence 999999999986543221111111224567999999998899999999999999999998 8888876443211 1
Q ss_pred hhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 445 ATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
.. ...... .. .+...+.++.+++.+||+.+|++|||+.++++.|+++.
T Consensus 247 -~~-~~~~~~------------~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 247 -KL-LKEGHR------------MD-KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred -HH-HHcCCC------------CC-CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 11 110000 00 11123457999999999999999999999999998776
No 224
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.6e-39 Score=323.50 Aligned_cols=240 Identities=23% Similarity=0.284 Sum_probs=187.1
Q ss_pred ecccCceEEEEEEeC-CCCEEEEEEecccchh---cHHHHHHHHHHHhhc---CCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 233 LGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ---RKKEFYSEIGRFARL---HHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 233 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
||+|+||.||+|... +++.||||++.+.... ....+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999975 5899999999754222 223455666676655 699999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|..++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.++|+|||++.........
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~- 152 (330)
T cd05586 81 GELFWHLQK----EGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT- 152 (330)
T ss_pred ChHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC-
Confidence 999988854 35689999999999999999999999 9999999999999999999999999998754322211
Q ss_pred ceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 386 RTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
.....||+.|+|||++.+. .++.++|||||||++|+|++|+.||...+... .. .. .....
T Consensus 153 -~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~---~~---~~-i~~~~----------- 213 (330)
T cd05586 153 -TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ---MY---RN-IAFGK----------- 213 (330)
T ss_pred -ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH---HH---HH-HHcCC-----------
Confidence 1223489999999998764 47899999999999999999999997644321 11 00 00000
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCC----CHHHHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRP----RMSHVVH 501 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP----s~~evl~ 501 (513)
...+....++++.+++.+||+.||.+|| ++.++++
T Consensus 214 --~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 214 --VRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred --CCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 0111122456789999999999999998 4566554
No 225
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.7e-38 Score=341.46 Aligned_cols=256 Identities=20% Similarity=0.316 Sum_probs=196.3
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--CceEEEEeec
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH--GDRYIVYEFV 303 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lv~e~~ 303 (513)
..+.||+|+||.||++... .+..||+|.+.... ......+..|+.+|++|+||||+++++++... ..+||||||+
T Consensus 17 Il~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~ 96 (1021)
T PTZ00266 17 VIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFC 96 (1021)
T ss_pred EEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCC
Confidence 3456799999999999975 47789999987542 23356789999999999999999999988654 4689999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC----CCceEcCCCCCceEecCC---------------
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVK----PHVVHRDIRASNVLLDEE--------------- 364 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~----~~ivH~Dikp~NIll~~~--------------- 364 (513)
++++|.++|.........+++..++.|+.||+.||+|||+... .+||||||||+||||+.+
T Consensus 97 ~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~n 176 (1021)
T PTZ00266 97 DAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLN 176 (1021)
T ss_pred CCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccC
Confidence 9999999997543334579999999999999999999998510 259999999999999642
Q ss_pred --CCeEEecccccccCCccccccceeecCccccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccch
Q 010309 365 --FGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR--NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQS 440 (513)
Q Consensus 365 --~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~ 440 (513)
..+||+|||++......... ....||+.|+|||++.+ ..++.++||||||||||||+||..||...+.. ..
T Consensus 177 g~~iVKLsDFGlAr~l~~~s~~---~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~--~q 251 (1021)
T PTZ00266 177 GRPIAKIGDFGLSKNIGIESMA---HSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNF--SQ 251 (1021)
T ss_pred CCCceEEccCCccccccccccc---cccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcH--HH
Confidence 34899999999866433221 12238999999999864 45789999999999999999999999754321 11
Q ss_pred hHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHH--HHHhcCc
Q 010309 441 IFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVV--HQLQQLA 507 (513)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl--~~L~~~~ 507 (513)
+.. ..... ...+....+.++.+||..||+.+|.+||++.++| ..+..+.
T Consensus 252 li~----~lk~~--------------p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~ 302 (1021)
T PTZ00266 252 LIS----ELKRG--------------PDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG 302 (1021)
T ss_pred HHH----HHhcC--------------CCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence 111 00000 0111122456799999999999999999999999 4555443
No 226
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.3e-38 Score=310.37 Aligned_cols=262 Identities=21% Similarity=0.364 Sum_probs=200.0
Q ss_pred HHHHHHHhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhc-CCCcEeeeeeEEe--
Q 010309 216 TEELRSITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCY-- 291 (513)
Q Consensus 216 ~~~l~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~-- 291 (513)
.+.+..+.++|... +.||+|+||.||++... +++.+|+|++.... .....+.+|+.+++.+ +||||+++++++.
T Consensus 10 ~~~~~~~~~~~~~~-~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 10 FDSFPDPSDTWEII-ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred eecCCCcccceeee-eeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 34455566666554 46799999999999864 58899999886532 2345688899999999 6999999999874
Q ss_pred ---eCCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeE
Q 010309 292 ---DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 368 (513)
Q Consensus 292 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~k 368 (513)
.++..++||||+++++|.+++.........+++..+..++.|++.||.|||+. +++||||||+||+++.++.++
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEE
Confidence 34568999999999999998864333445689999999999999999999999 999999999999999999999
Q ss_pred EecccccccCCccccccceeecCccccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHH
Q 010309 369 LMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR-----NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFE 443 (513)
Q Consensus 369 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~ 443 (513)
|+|||++......... .....|++.|+|||++.. ..++.++|||||||++|||++|+.||....... .+..
T Consensus 165 l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~--~~~~ 240 (286)
T cd06638 165 LVDFGVSAQLTSTRLR--RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR--ALFK 240 (286)
T ss_pred EccCCceeecccCCCc--cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH--HHhh
Confidence 9999998765432211 112238899999998853 447889999999999999999999987643211 0000
Q ss_pred hhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 444 WATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
. . ....+.. ..+...+..+.+++.+||+.||++|||+.||++.
T Consensus 241 ----~-~-----~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 241 ----I-P-----RNPPPTL------HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ----c-c-----ccCCCcc------cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 0 0 0000000 0011234569999999999999999999999874
No 227
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=8.7e-39 Score=306.87 Aligned_cols=250 Identities=29% Similarity=0.427 Sum_probs=196.4
Q ss_pred CCceecccCceEEEEEEeCC-CCEEEEEEecccchhcHH--HHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 229 GNRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKK--EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
..+.||+|+||+||++.... ++.||+|++......... ...+|+.++++++||||+++++++.+....++|||++++
T Consensus 3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~ 82 (260)
T PF00069_consen 3 LVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPG 82 (260)
T ss_dssp EEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETT
T ss_pred EeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccc
Confidence 34678999999999999765 568999999877543332 345699999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
++|.+++.. ...+++..+..++.|++.||.+||+. +++|+||||+||+++.++.++|+|||.+....... .
T Consensus 83 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~--~ 153 (260)
T PF00069_consen 83 GSLQDYLQK----NKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENN--E 153 (260)
T ss_dssp EBHHHHHHH----HSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTT--S
T ss_pred ccccccccc----cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc--c
Confidence 999999972 35689999999999999999999999 99999999999999999999999999997641111 1
Q ss_pred ceeecCcccccccccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 386 RTVMAGGTYGYLAPEFVY-RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
......++..|+|||++. +...+.++||||||+++|+|++|..||.................. ......
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~--- 223 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKR-------PLPSSS--- 223 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHT-------HHHHHT---
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc-------cccccc---
Confidence 122233889999999998 788899999999999999999999999865211111111100000 000000
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. ........+.+++.+||+.||++||++.++++
T Consensus 224 --~--~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 224 --Q--QSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp --T--SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred --c--ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 00011267999999999999999999999985
No 228
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.8e-38 Score=302.90 Aligned_cols=249 Identities=22% Similarity=0.325 Sum_probs=200.9
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
..+.||+|++|.||++... +++.+|+|.+........+.+.+|+.++++++||||+++++++.+.+..+++|||+++++
T Consensus 7 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~ 86 (262)
T cd06613 7 LIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGS 86 (262)
T ss_pred EEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCc
Confidence 3456799999999999974 578999999987655566889999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++... ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++......... .
T Consensus 87 l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~--~ 158 (262)
T cd06613 87 LQDIYQVT---RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAK--R 158 (262)
T ss_pred HHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhhhc--c
Confidence 99988642 25689999999999999999999999 9999999999999999999999999998865432211 1
Q ss_pred eecCcccccccccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 388 VMAGGTYGYLAPEFVYRN---ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
....++..|+|||.+.+. .++.++||||||+++|||+||+.||...+... .... .... .....
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~--~~~~-----~~~~---~~~~~---- 224 (262)
T cd06613 159 KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR--ALFL-----ISKS---NFPPP---- 224 (262)
T ss_pred ccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHH-----HHhc---cCCCc----
Confidence 122378889999998776 78899999999999999999999997654321 0000 0000 00000
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
........+.++.+++.+||+.+|.+|||+++|+.
T Consensus 225 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 225 --KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred --cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 01112345678999999999999999999999974
No 229
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.8e-38 Score=311.96 Aligned_cols=264 Identities=17% Similarity=0.220 Sum_probs=194.9
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
..+.||+|+||.||+|... +++.||+|.++... ......+.+|+.+++.++||||+++++++...+..++||||++ +
T Consensus 10 ~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~ 88 (301)
T cd07873 10 KLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-K 88 (301)
T ss_pred EeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-c
Confidence 3456799999999999875 58899999987543 2234567889999999999999999999999999999999996 5
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. ....+++..+..++.|++.||+|||+. +++|+||||+|||++.++.++|+|||++..........
T Consensus 89 ~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~- 161 (301)
T cd07873 89 DLKQYLDD---CGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY- 161 (301)
T ss_pred CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcc-
Confidence 89888864 234688999999999999999999999 99999999999999999999999999997643322111
Q ss_pred eeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccc------
Q 010309 387 TVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLD------ 459 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 459 (513)
....+++.|+|||++.+. .++.++||||||+++|||+||++||...+.......................+.
T Consensus 162 -~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 162 -SNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred -cccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 112268899999988654 578899999999999999999999976543211111000000000000000000
Q ss_pred ccccCCCCC---CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 460 PLISSLSSD---IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 460 ~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
......... ......++.+.+||.+||+.||.+|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000000 001124567899999999999999999999997
No 230
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6e-39 Score=323.83 Aligned_cols=252 Identities=19% Similarity=0.225 Sum_probs=194.6
Q ss_pred hCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEE
Q 010309 224 KNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIV 299 (513)
Q Consensus 224 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 299 (513)
++|.. .+.||+|+||.||++... +++.||+|++.+.. ......+.+|..+++.++||||+++++.+.+++..++|
T Consensus 43 ~~y~i-~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (371)
T cd05622 43 EDYEV-VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 121 (371)
T ss_pred hhcEE-EEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 44444 457799999999999975 58899999986532 22345678899999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCC
Q 010309 300 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVP 379 (513)
Q Consensus 300 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~ 379 (513)
|||+++|+|.+++.. ..+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++....
T Consensus 122 ~Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~ 193 (371)
T cd05622 122 MEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 193 (371)
T ss_pred EcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence 999999999999864 3488899999999999999999999 99999999999999999999999999998764
Q ss_pred ccccccceeecCcccccccccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccc
Q 010309 380 WEVMQERTVMAGGTYGYLAPEFVYRN----ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYL 455 (513)
Q Consensus 380 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (513)
...... .....||+.|+|||++.+. .++.++|||||||++|||++|..||...+... . ..........
T Consensus 194 ~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~---~---~~~i~~~~~~- 265 (371)
T cd05622 194 KEGMVR-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG---T---YSKIMNHKNS- 265 (371)
T ss_pred cCCccc-ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH---H---HHHHHcCCCc-
Confidence 332211 1123489999999998754 37889999999999999999999997654311 0 1111110000
Q ss_pred ccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q 010309 456 ELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSM--RPRMSHVVHQ 502 (513)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 502 (513)
+ ........+..+.++|.+||..+|.+ ||+++++++.
T Consensus 266 ------~----~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 266 ------L----TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred ------c----cCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 0 00111235667899999999844433 7899988873
No 231
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.6e-38 Score=307.73 Aligned_cols=267 Identities=24% Similarity=0.372 Sum_probs=201.5
Q ss_pred CceecccCceEEEEEEeC-----CCCEEEEEEecccchh-cHHHHHHHHHHHhhcCCCcEeeeeeEEee--CCceEEEEe
Q 010309 230 NRLLGDSKTGGTYSGILP-----DGSRVAVKRLKRSSFQ-RKKEFYSEIGRFARLHHPNLVAVKGCCYD--HGDRYIVYE 301 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lv~e 301 (513)
.+.||+|+||.||++... ++..||||++...... ..+.+.+|+++++.++||||+++++++.. ....++|||
T Consensus 9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 88 (284)
T cd05038 9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIME 88 (284)
T ss_pred heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEe
Confidence 356799999999999853 3689999999866443 46789999999999999999999999887 557899999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
|+++++|.+++... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+......
T Consensus 89 ~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05038 89 YLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVLPED 162 (284)
T ss_pred cCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccccccC
Confidence 99999999999642 23589999999999999999999999 9999999999999999999999999999876532
Q ss_pred cccc-ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 382 VMQE-RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 382 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
.... ......++..|+|||.+.+..++.++||||||+++|||+||..|+......... ...............+.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05038 163 KDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR-MIGIAQGQMIVTRLLELLKE 241 (284)
T ss_pred CcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc-ccccccccccHHHHHHHHHc
Confidence 2111 111112456799999998888999999999999999999999998653321100 00000000000000000000
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
.. ....+..++.++.+++.+||+.+|++|||+.||+++|+++.
T Consensus 242 ~~----~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 242 GE----RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred CC----cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 00 01111234467999999999999999999999999998763
No 232
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=5.2e-38 Score=304.81 Aligned_cols=243 Identities=20% Similarity=0.342 Sum_probs=198.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.+.||.|+||.||+|... ++..||||.+.... ......+.+|+.++++++||||+++++++.+++..++||||+++++
T Consensus 9 ~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (277)
T cd06640 9 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGS 88 (277)
T ss_pred hhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCc
Confidence 345799999999999975 58899999987543 3445678899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++.. ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++......... .
T Consensus 89 L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~--~ 158 (277)
T cd06640 89 ALDLLRA-----GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--R 158 (277)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCccc--c
Confidence 9999853 4588999999999999999999999 9999999999999999999999999999766433211 1
Q ss_pred eecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCC
Q 010309 388 VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSS 467 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (513)
....++..|+|||++.+..++.++|+||||+++|||+||..||........... .. . ...
T Consensus 159 ~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~-------~~---------~----~~~ 218 (277)
T cd06640 159 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL-------IP---------K----NNP 218 (277)
T ss_pred ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhh-------hh---------c----CCC
Confidence 122378889999999888899999999999999999999999876543210000 00 0 001
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 468 DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 468 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
.......+..+.+++.+||+.+|++||+++++++.
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 219 PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 11223467789999999999999999999999764
No 233
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.6e-38 Score=306.40 Aligned_cols=242 Identities=21% Similarity=0.344 Sum_probs=198.0
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
+.||.|++|.||+|... +++.||+|.+.... ......+.+|+.+++.++||||+++++++.++...++|+||+++++|
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 86 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSC 86 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcH
Confidence 45799999999999975 58899999997653 33446788999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.. ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.......... .
T Consensus 87 ~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~--~ 156 (274)
T cd06609 87 LDLLKP-----GKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKR--N 156 (274)
T ss_pred HHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccccccc--c
Confidence 999864 2689999999999999999999999 99999999999999999999999999998775432211 1
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...+++.|+|||++.+..++.++||||||+++|+|+||..||...+.... . . .... ... ..
T Consensus 157 ~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~---~---~-~~~~-----~~~-------~~ 217 (274)
T cd06609 157 TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV---L---F-LIPK-----NNP-------PS 217 (274)
T ss_pred cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH---H---H-Hhhh-----cCC-------CC
Confidence 22378889999999988899999999999999999999999976442110 0 0 0000 000 11
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.....++..+.+++.+||..+|++|||++++++
T Consensus 218 ~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 218 LEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred CcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 111125567999999999999999999999976
No 234
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=6.8e-39 Score=320.92 Aligned_cols=199 Identities=24% Similarity=0.301 Sum_probs=170.9
Q ss_pred ccCCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcC-C-----CcEeeeeeEEeeCCceEEE
Q 010309 227 SEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLH-H-----PNLVAVKGCCYDHGDRYIV 299 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~nIv~l~~~~~~~~~~~lv 299 (513)
++..++||+|.||.|.++.+. +++.||||+++... .-..+...|+.+|..|+ | -|+|+++++|...++.|||
T Consensus 188 Y~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciV 266 (586)
T KOG0667|consen 188 YEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIV 266 (586)
T ss_pred EEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeee
Confidence 344678999999999999964 59999999998653 33456678999999996 4 4899999999999999999
Q ss_pred EeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC--CeEEeccccccc
Q 010309 300 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF--GAHLMGVGLSKF 377 (513)
Q Consensus 300 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~--~~kl~Dfg~~~~ 377 (513)
+|.+ ..+|.++|+.. .-..++...++.|+.||+.||.+||+. +|||+||||+||||.... .+||+|||.|..
T Consensus 267 fELL-~~NLYellK~n--~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 267 FELL-STNLYELLKNN--KFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred ehhh-hhhHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccccc
Confidence 9999 66999999863 345699999999999999999999999 999999999999996543 699999999997
Q ss_pred CCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccc
Q 010309 378 VPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVC 437 (513)
Q Consensus 378 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~ 437 (513)
...... ...-+..|+|||++.+.+|+.+.||||||||+.||++|.+.|.+.++.+
T Consensus 341 ~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~D 395 (586)
T KOG0667|consen 341 ESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYD 395 (586)
T ss_pred cCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHH
Confidence 754433 1226778999999999999999999999999999999999998876543
No 235
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4e-38 Score=323.33 Aligned_cols=260 Identities=20% Similarity=0.176 Sum_probs=190.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.+.||+|+||.||++... .++.||||.... ..+.+|+.+|++++||||+++++++...+..++|||++ .++|
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~-~~~L 246 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY-RSDL 246 (461)
T ss_pred EEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc-CCCH
Confidence 456899999999999975 478999996432 23568999999999999999999999999999999999 5788
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++... ...+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++............
T Consensus 247 ~~~l~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 320 (461)
T PHA03211 247 YTYLGAR---LRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY 320 (461)
T ss_pred HHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence 8888542 24699999999999999999999999 99999999999999999999999999998654332221122
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcccc-----chhHHhhhHHhh-ccccccccc---
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCW-----QSIFEWATPLVQ-SHRYLELLD--- 459 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~--- 459 (513)
...||+.|+|||++.+..++.++|||||||+||||++|..|+........ ..+......... ...+.....
T Consensus 321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l 400 (461)
T PHA03211 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRL 400 (461)
T ss_pred ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHH
Confidence 23489999999999999999999999999999999998876543321110 111111110000 000000000
Q ss_pred -----cc----ccCCCCCCC---cHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 460 -----PL----ISSLSSDIP---EAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 460 -----~~----~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
.. ......... ....+..+.+||.+||+.||.+|||+.|+|+.
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 000000000 01234578899999999999999999999863
No 236
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=5.5e-38 Score=310.73 Aligned_cols=199 Identities=19% Similarity=0.326 Sum_probs=160.0
Q ss_pred CceecccCceEEEEEEeC---CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEee--CCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILP---DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD--HGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lv~e~~~ 304 (513)
...||+|+||.||+|... ++..||+|.+.... ....+.+|+.++++++||||+++++++.. +...++||||+.
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 346799999999999964 35789999987543 23467889999999999999999999854 456799999985
Q ss_pred CCCHHHHhccCC-----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEe----cCCCCeEEeccccc
Q 010309 305 NGPLDRWLHHIP-----RGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL----DEEFGAHLMGVGLS 375 (513)
Q Consensus 305 ~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll----~~~~~~kl~Dfg~~ 375 (513)
++|.+++.... .....+++..+..++.||+.||.|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 57877764221 1223588999999999999999999999 99999999999999 55678999999999
Q ss_pred ccCCcccccc-ceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCC
Q 010309 376 KFVPWEVMQE-RTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVD 434 (513)
Q Consensus 376 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~ 434 (513)
+......... ......+|+.|+|||++.+. .++.++|||||||++|||+||++||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~ 220 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence 8764332111 11122378999999998764 57899999999999999999999997543
No 237
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.5e-38 Score=305.55 Aligned_cols=250 Identities=22% Similarity=0.366 Sum_probs=198.4
Q ss_pred CceecccCceEEEEEEeCC--CCEEEEEEecccc----------hhcHHHHHHHHHHHhh-cCCCcEeeeeeEEeeCCce
Q 010309 230 NRLLGDSKTGGTYSGILPD--GSRVAVKRLKRSS----------FQRKKEFYSEIGRFAR-LHHPNLVAVKGCCYDHGDR 296 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~~~~~ 296 (513)
.+.||+|+||.||+|.... ++.+|+|.+.... .....++.+|+.++.+ ++||||+++++++.+.+..
T Consensus 5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 84 (269)
T cd08528 5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRL 84 (269)
T ss_pred hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeE
Confidence 3467999999999999765 6889999886321 1223557788888875 6999999999999999999
Q ss_pred EEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCceEcCCCCCceEecCCCCeEEeccccc
Q 010309 297 YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD-KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLS 375 (513)
Q Consensus 297 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~ 375 (513)
++||||+++++|.+++.........+++..++.++.|++.||.|||+ . +++|+||+|+||+++.++.++|+|||.+
T Consensus 85 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 161 (269)
T cd08528 85 YIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITDFGLA 161 (269)
T ss_pred EEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEecccce
Confidence 99999999999999886543445679999999999999999999996 5 8999999999999999999999999999
Q ss_pred ccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccc
Q 010309 376 KFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYL 455 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (513)
....... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||...+... ....... ..
T Consensus 162 ~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~------~~~~~~~-~~-- 229 (269)
T cd08528 162 KQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS------LATKIVE-AV-- 229 (269)
T ss_pred eeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH------HHHHHhh-cc--
Confidence 8765432 1122337889999999998889999999999999999999999986543211 0111000 00
Q ss_pred ccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 456 ELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
. ........++.+.+++.+||+.||++||++.|+.++|+
T Consensus 230 ------~----~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 230 ------Y----EPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ------C----CcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 0 00111124567999999999999999999999999876
No 238
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.5e-38 Score=308.57 Aligned_cols=241 Identities=22% Similarity=0.364 Sum_probs=196.4
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++||||+++++.+...+..++||||+++++|
T Consensus 10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (277)
T cd06642 10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSA 89 (277)
T ss_pred HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcH
Confidence 35799999999999864 57899999987543 23446789999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.. ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......... .
T Consensus 90 ~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~--~ 159 (277)
T cd06642 90 LDLLKP-----GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR--N 159 (277)
T ss_pred HHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcchhh--h
Confidence 998853 4588999999999999999999999 99999999999999999999999999998665332211 1
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...++..|+|||++.+..++.++||||||+++|||++|..|+.......... ... ....+
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-------~~~-----~~~~~-------- 219 (277)
T cd06642 160 TFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF-------LIP-----KNSPP-------- 219 (277)
T ss_pred cccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh-------hhh-----cCCCC--------
Confidence 1237889999999998889999999999999999999999987543321000 000 00000
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
......+..+.+++.+||+.+|++||++.++++
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 220 TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 111234567999999999999999999999997
No 239
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.6e-38 Score=308.03 Aligned_cols=261 Identities=22% Similarity=0.334 Sum_probs=194.3
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccch--hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
+.||+|++|.||+|... ++..||||.++.... .....+.+|+.++++++||||+++++++.+++..++||||++ ++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~ 84 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MD 84 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CC
Confidence 46799999999999975 689999999865422 234678899999999999999999999999999999999996 68
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++..... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......... .
T Consensus 85 l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~--~ 158 (285)
T cd07861 85 LKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV--Y 158 (285)
T ss_pred HHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCccc--c
Confidence 9888865332 35689999999999999999999999 9999999999999999999999999998765432111 1
Q ss_pred eecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHH-------hhc----cccc
Q 010309 388 VMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPL-------VQS----HRYL 455 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~-------~~~----~~~~ 455 (513)
....+++.|+|||++.+. .++.++||||||+++|+|+||++||....... ......... +.. ....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (285)
T cd07861 159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID--QLFRIFRILGTPTEDVWPGVTSLPDYK 236 (285)
T ss_pred cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHhCCCChhhhhcchhhHHHH
Confidence 112268899999988654 57889999999999999999999997654321 000000000 000 0000
Q ss_pred ccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 456 ELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.......... ........++++.++|.+||+.||++|||+.+|++
T Consensus 237 ~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 237 NTFPKWKKGS-LRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhccccCcch-hHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000 00001124567899999999999999999999975
No 240
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.4e-38 Score=303.93 Aligned_cols=247 Identities=26% Similarity=0.439 Sum_probs=196.9
Q ss_pred CceecccCceEEEEEEeCCCCEEEEEEecccch------hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 230 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSF------QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
.+.||+|+||.||+|...+++.+|||.+..... .....+.+|+.++++++|+||+++++++.+.+..++|+||+
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (265)
T cd06631 5 GEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFV 84 (265)
T ss_pred cceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecC
Confidence 456899999999999988899999999864321 12356889999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
++++|.+++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++........
T Consensus 85 ~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 85 PGGSISSILNR----FGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 99999999964 24588999999999999999999999 999999999999999999999999999876532111
Q ss_pred ----ccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccc
Q 010309 384 ----QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLD 459 (513)
Q Consensus 384 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (513)
........++..|+|||++.+..++.++||||||+++|+|++|..||...+... ... ..... ... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--~~~----~~~~~---~~~-~ 227 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA--AMF----YIGAH---RGL-M 227 (265)
T ss_pred cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH--HHH----Hhhhc---cCC-C
Confidence 111112237889999999998889999999999999999999999997543211 000 00000 000 0
Q ss_pred ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 460 PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+ ..+...+.++.++|.+||+.+|++||++.++++
T Consensus 228 ~--------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 228 P--------RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred C--------CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 011234567899999999999999999999885
No 241
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.2e-38 Score=302.21 Aligned_cols=243 Identities=29% Similarity=0.459 Sum_probs=195.6
Q ss_pred CCceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 229 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
..+.||+|+||.||++.. +++.||+|.++... ..+.+.+|+.+++.++||||+++++++... ..++||||+++++|
T Consensus 10 ~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L 85 (254)
T cd05083 10 LGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNL 85 (254)
T ss_pred eeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCH
Confidence 346789999999999985 78889999986542 346788999999999999999999998654 57999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++... ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~l~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~----- 155 (254)
T cd05083 86 VNFLRTR--GRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD----- 155 (254)
T ss_pred HHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccCC-----
Confidence 9999752 234689999999999999999999999 999999999999999999999999999875432211
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSS 467 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (513)
....+..|+|||.+.+..++.++|+||||+++|||++ |+.||...+..... . ...... .
T Consensus 156 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~---~----~~~~~~-------------~ 215 (254)
T cd05083 156 NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK---E----CVEKGY-------------R 215 (254)
T ss_pred CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHH---H----HHhCCC-------------C
Confidence 1124567999999988889999999999999999998 99998765432111 0 111000 0
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 468 DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 468 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
..+....+..+.+++.+||+.+|++||++++|++.|++
T Consensus 216 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 216 MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 01112345678999999999999999999999999874
No 242
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=5.7e-39 Score=323.39 Aligned_cols=247 Identities=19% Similarity=0.220 Sum_probs=192.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||.||++... +++.||||+++... ......+.+|+.++..++||||+++++.+.+.+..++||||+++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~g 85 (360)
T cd05627 6 LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPG 85 (360)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCC
Confidence 457899999999999975 58999999997542 22345678899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc-
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ- 384 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~- 384 (513)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+|||++.........
T Consensus 86 g~L~~~l~~----~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 86 GDMMTLLMK----KDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred ccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999864 35689999999999999999999999 9999999999999999999999999998754321100
Q ss_pred --------------------------------cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 010309 385 --------------------------------ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQA 432 (513)
Q Consensus 385 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~ 432 (513)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 001123489999999999999999999999999999999999999976
Q ss_pred CCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCC---HHHHHH
Q 010309 433 VDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPR---MSHVVH 501 (513)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 501 (513)
.+.... ........ ..+ ...+....++++.+||.+++. ||.+|++ ++++++
T Consensus 239 ~~~~~~------~~~i~~~~-------~~~----~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 239 ETPQET------YRKVMNWK-------ETL----VFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKS 292 (360)
T ss_pred CCHHHH------HHHHHcCC-------Cce----ecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence 543211 00000000 000 000111245678899999774 9999985 555554
No 243
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.3e-38 Score=313.21 Aligned_cols=255 Identities=23% Similarity=0.402 Sum_probs=198.3
Q ss_pred CCceecccCceEEEEEEeC-CCC----EEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGS----RVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
..+.||+|+||.||+|... +|. .||+|.+..... .....+.+|+.+++.++||||+++++++... ..++++||
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~ 89 (303)
T cd05110 11 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQL 89 (303)
T ss_pred eccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeeehh
Confidence 3456899999999999863 343 579998875532 2234688999999999999999999998754 56799999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~ 382 (513)
+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~g~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~ 163 (303)
T cd05110 90 MPHGCLLDYVHEH---KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 163 (303)
T ss_pred cCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccccCcc
Confidence 9999999998642 24588999999999999999999999 99999999999999999999999999998765332
Q ss_pred cccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhccccccccccc
Q 010309 383 MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPL 461 (513)
Q Consensus 383 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (513)
.........++..|+|||.+.+..++.++||||||+++|||++ |..||....... ... .......
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~---~~~----~~~~~~~------- 229 (303)
T cd05110 164 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE---IPD----LLEKGER------- 229 (303)
T ss_pred cccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHHCCCC-------
Confidence 2211112225678999999988889999999999999999997 899987643221 111 1111100
Q ss_pred ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcCCC
Q 010309 462 ISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQPP 510 (513)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 510 (513)
. ..+...+..+.+++.+||..+|++||+++++++.|+.+...+
T Consensus 230 ~------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 230 L------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred C------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 0 001123456899999999999999999999999998876543
No 244
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.2e-38 Score=313.96 Aligned_cols=188 Identities=19% Similarity=0.325 Sum_probs=159.3
Q ss_pred ccCCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 227 SEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
+...+.||+|+||.||+|... +++.||+|+.... ....|+.++++++||||+++++++...+..++|||++ .
T Consensus 68 y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~ 140 (357)
T PHA03209 68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY-S 140 (357)
T ss_pred cEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc-C
Confidence 344567799999999999975 4778999976433 2356899999999999999999999999999999999 5
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
++|.+++.. ....+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++.........
T Consensus 141 ~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~- 213 (357)
T PHA03209 141 SDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAF- 213 (357)
T ss_pred CcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccCccc-
Confidence 688888853 235689999999999999999999999 9999999999999999999999999999754322111
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPA 430 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~ 430 (513)
....||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 214 --~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 214 --LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred --ccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 1223899999999999999999999999999999999865554
No 245
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.7e-38 Score=303.26 Aligned_cols=245 Identities=24% Similarity=0.447 Sum_probs=196.5
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchh---------cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEE
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ---------RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIV 299 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 299 (513)
..+||+|++|.||+|... +++.||+|.+...... ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 5 ~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (267)
T cd06628 5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIF 84 (267)
T ss_pred cceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEE
Confidence 357899999999999864 5889999988654222 125678899999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCC
Q 010309 300 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVP 379 (513)
Q Consensus 300 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~ 379 (513)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||.++...
T Consensus 85 ~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 85 LEYVPGGSVAALLNN----YGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred EEecCCCCHHHHHHh----ccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 999999999999964 24688999999999999999999999 99999999999999999999999999998765
Q ss_pred cccccc----ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccc
Q 010309 380 WEVMQE----RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYL 455 (513)
Q Consensus 380 ~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (513)
...... ......++..|+|||.+.+..++.++||||||+++|+|++|..||...+.. .... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~----~~~------ 225 (267)
T cd06628 158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL--QAIF----KIG------ 225 (267)
T ss_pred cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH--HHHH----HHh------
Confidence 321111 111223788999999998888999999999999999999999999764321 0100 000
Q ss_pred ccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 456 ELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....+ . .+...+..+.++|.+||+.||.+||++.+|++
T Consensus 226 ~~~~~-------~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 226 ENASP-------E-IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ccCCC-------c-CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 00001 1 11234567999999999999999999999985
No 246
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.6e-38 Score=316.37 Aligned_cols=250 Identities=21% Similarity=0.235 Sum_probs=192.2
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||.||++... +++.||||++.+.. ....+.+.+|..++..++|+||+++++++.+.+..++||||+++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g 85 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVG 85 (331)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCC
Confidence 456899999999999965 58999999997532 22345688899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++..........
T Consensus 86 ~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 86 GDLLTLLSK---FEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred CcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 999999964 234689999999999999999999999 99999999999999999999999999987654332211
Q ss_pred ceeecCccccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 386 RTVMAGGTYGYLAPEFVYR-----NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
. ....||+.|+|||++.. ..++.++|||||||++|||++|+.||...... +.............
T Consensus 160 ~-~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~------~~~~~i~~~~~~~~---- 228 (331)
T cd05597 160 S-NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHKEHFQ---- 228 (331)
T ss_pred c-cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH------HHHHHHHcCCCccc----
Confidence 1 12238999999999863 45788999999999999999999999764321 11111111000000
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCC--CCCCHHHHHHH
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPS--MRPRMSHVVHQ 502 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~--~RPs~~evl~~ 502 (513)
+ ... ....++.+.+++.+||..+++ .||+++++++.
T Consensus 229 -~---~~~--~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 -F---PPD--VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred -C---CCc--cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 0 000 112456789999998865443 37899888864
No 247
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.1e-38 Score=318.56 Aligned_cols=265 Identities=20% Similarity=0.277 Sum_probs=194.2
Q ss_pred HhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC-----
Q 010309 222 ITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH----- 293 (513)
Q Consensus 222 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----- 293 (513)
+.++|.. .+.||+|+||.||++... .++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQN-LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeE-EEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 3445544 456799999999999964 58899999997542 23346788999999999999999999987643
Q ss_pred -CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecc
Q 010309 294 -GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGV 372 (513)
Q Consensus 294 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 372 (513)
...|+||||+++ +|.+.+. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 170 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 170 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHH------hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeC
Confidence 356999999964 7777764 3478899999999999999999999 9999999999999999999999999
Q ss_pred cccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccch-hHHh-------
Q 010309 373 GLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQS-IFEW------- 444 (513)
Q Consensus 373 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~-~~~~------- 444 (513)
|+++........ ....+|+.|+|||++.+..++.++|||||||++|||++|+.||...+...... ....
T Consensus 171 G~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 247 (364)
T cd07875 171 GLARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE 247 (364)
T ss_pred CCccccCCCCcc---cCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 999865433211 12238899999999999999999999999999999999999997654321110 0000
Q ss_pred ----hhH----Hhhc-ccc-----cccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 445 ----ATP----LVQS-HRY-----LELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 445 ----~~~----~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
... .... ... ........... ...........+.+||.+||+.||.+|||+.++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA-DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HHHhhhHHHHHHHhhCCCcCCCChHhhCccccccc-cccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 0000 000 00000000000 00001113457899999999999999999999987
No 248
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3e-38 Score=317.60 Aligned_cols=267 Identities=20% Similarity=0.273 Sum_probs=194.6
Q ss_pred HhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC-----
Q 010309 222 ITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH----- 293 (513)
Q Consensus 222 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----- 293 (513)
+.++|.. .+.||+|+||.||++... .++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQN-LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeE-EEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 4445544 456799999999999864 58899999997542 23346778899999999999999999988654
Q ss_pred -CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecc
Q 010309 294 -GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGV 372 (513)
Q Consensus 294 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 372 (513)
...++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Df 163 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 163 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeC
Confidence 346999999965 6766664 3488899999999999999999999 9999999999999999999999999
Q ss_pred cccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcccc-chhHHh-------
Q 010309 373 GLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCW-QSIFEW------- 444 (513)
Q Consensus 373 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~-~~~~~~------- 444 (513)
|+++........ ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.... ......
T Consensus 164 g~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (355)
T cd07874 164 GLARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240 (355)
T ss_pred cccccCCCcccc---CCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 999865433211 122388999999999988999999999999999999999999976542210 000000
Q ss_pred --------hhHHhhc-ccccccccccc--cCCC--CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 445 --------ATPLVQS-HRYLELLDPLI--SSLS--SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 445 --------~~~~~~~-~~~~~~~~~~~--~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
....... ........+.. .... ........+.++.+||.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0000000 00000000000 0000 000111234578999999999999999999999973
No 249
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=4.6e-38 Score=305.66 Aligned_cols=246 Identities=24% Similarity=0.371 Sum_probs=197.6
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHH
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 309 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 309 (513)
+.||.|++|.||++... ++..||+|++........+.+.+|+.++++++||||+++++.+...+..++||||+++++|.
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALD 90 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHH
Confidence 34699999999999974 58999999998766566678999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceee
Q 010309 310 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 389 (513)
Q Consensus 310 ~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 389 (513)
+++... ...+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||++.......... ..
T Consensus 91 ~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~--~~ 162 (280)
T cd06611 91 SIMLEL---ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR--DT 162 (280)
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccccccc--ce
Confidence 998642 34699999999999999999999999 99999999999999999999999999987654322211 12
Q ss_pred cCcccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 390 AGGTYGYLAPEFVY-----RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 390 ~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
..+++.|+|||++. ...++.++||||||+++|||++|+.||...+... .. ... ... ..+.+
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~--~~----~~~-~~~-----~~~~~-- 228 (280)
T cd06611 163 FIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR--VL----LKI-LKS-----EPPTL-- 228 (280)
T ss_pred eecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH--HH----HHH-hcC-----CCCCc--
Confidence 23788999999875 3456789999999999999999999997654321 00 000 000 00000
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
..+...+.++.+++.+||+.+|.+||++.++++.
T Consensus 229 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 229 ----DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ----CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 1112345678999999999999999999999863
No 250
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.8e-38 Score=310.32 Aligned_cols=243 Identities=23% Similarity=0.371 Sum_probs=197.7
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHH
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 310 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 310 (513)
.||+|+||.||++... ++..||||.+........+.+.+|+.+++.++||||+++++.+...+..++||||+++++|.+
T Consensus 29 ~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~ 108 (292)
T cd06658 29 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTD 108 (292)
T ss_pred cccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHH
Confidence 4799999999999864 588999999976655556778999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeec
Q 010309 311 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 390 (513)
Q Consensus 311 ~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 390 (513)
++.. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||++.......... ...
T Consensus 109 ~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~--~~~ 178 (292)
T cd06658 109 IVTH-----TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR--KSL 178 (292)
T ss_pred HHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccC--cee
Confidence 8853 3588999999999999999999999 99999999999999999999999999987654322211 112
Q ss_pred CcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCC
Q 010309 391 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIP 470 (513)
Q Consensus 391 ~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (513)
.++..|+|||.+.+..++.++||||||+++|||++|+.||...+... ..... ...+.+.. . .
T Consensus 179 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~---~~~~~---------~~~~~~~~----~--~ 240 (292)
T cd06658 179 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ---AMRRI---------RDNLPPRV----K--D 240 (292)
T ss_pred ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHH---------HhcCCCcc----c--c
Confidence 37889999999988889999999999999999999999997543311 00000 00111111 0 0
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 471 EAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 471 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
....+..+.+++.+||..||++|||++++++.
T Consensus 241 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 241 SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11245578899999999999999999999974
No 251
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=318.28 Aligned_cols=238 Identities=24% Similarity=0.391 Sum_probs=198.3
Q ss_pred ecccCceEEEEEEe-CCCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 233 LGDSKTGGTYSGIL-PDGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 233 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
||.|+||.||-|+. .+.+.||||.+.-.. ...-.++.+|+..|++++|||++.+-|++..+...+|||||| -|+-
T Consensus 34 IGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC-lGSA 112 (948)
T KOG0577|consen 34 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC-LGSA 112 (948)
T ss_pred hcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH-hccH
Confidence 59999999999996 468899999997543 334478999999999999999999999999999999999999 5677
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.-. .+++.+..+..|..+.+.||+|||+. +.||||||+.|||+++.|.|||+|||.+....+..
T Consensus 113 sDlleVh---kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn------ 180 (948)
T KOG0577|consen 113 SDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN------ 180 (948)
T ss_pred HHHHHHH---hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCchh------
Confidence 7777532 36799999999999999999999999 99999999999999999999999999998765432
Q ss_pred ecCcccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 389 MAGGTYGYLAPEFVY---RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
...|||.|||||++. .+.|+-++||||||++..||.-.++|+..++.. .......+. .
T Consensus 181 sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM------SALYHIAQN-------------e 241 (948)
T KOG0577|consen 181 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQN-------------E 241 (948)
T ss_pred cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH------HHHHHHHhc-------------C
Confidence 234999999999986 478999999999999999999999998776432 111111111 1
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
++.....+.+..+.+|+..||+.-|.+|||.++++.-
T Consensus 242 sPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 242 SPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred CCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 1223345678889999999999999999999999864
No 252
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.6e-38 Score=307.11 Aligned_cols=250 Identities=23% Similarity=0.346 Sum_probs=199.1
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
+.||+|++|+||++... +|+.||+|++.... ....+.+.+|+++++.++||||+++++.+...+..++||||+++++|
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 90 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSL 90 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCH
Confidence 46799999999999964 58899999886542 33457889999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.. ...+++..+..++.+++.||.|||+.. +++|+||||+||+++.++.++|+|||++........ .
T Consensus 91 ~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~----~ 160 (284)
T cd06620 91 DRIYKK----GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA----D 160 (284)
T ss_pred HHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhcc----C
Confidence 998854 346899999999999999999999732 899999999999999999999999999875432211 1
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcccc-----chhHHhhhHHhhccccccccccccc
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCW-----QSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
...++..|+|||++.+..++.++|||||||++|+|+||..||........ ..+.+...... .
T Consensus 161 ~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------------~ 227 (284)
T cd06620 161 TFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIV-------------Q 227 (284)
T ss_pred ccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHh-------------h
Confidence 22388999999999888899999999999999999999999986543210 11111111111 0
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQL 503 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 503 (513)
......+....+..+.+|+.+||+.||++|||+.|+++..
T Consensus 228 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 228 EPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred ccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0011122223566799999999999999999999999753
No 253
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.6e-38 Score=310.04 Aligned_cols=242 Identities=21% Similarity=0.351 Sum_probs=197.3
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHH
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 310 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 310 (513)
.||+|+||.||++... +++.||+|.+........+.+.+|+.++..++||||+++++++..++..++||||+++++|..
T Consensus 28 ~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~ 107 (297)
T cd06659 28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTD 107 (297)
T ss_pred hcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHH
Confidence 4699999999999864 689999999976555556778899999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeec
Q 010309 311 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 390 (513)
Q Consensus 311 ~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 390 (513)
++.. ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.......... ...
T Consensus 108 ~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~--~~~ 177 (297)
T cd06659 108 IVSQ-----TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR--KSL 177 (297)
T ss_pred HHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccc--cce
Confidence 8753 4589999999999999999999999 99999999999999999999999999987554332211 123
Q ss_pred CcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCC
Q 010309 391 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIP 470 (513)
Q Consensus 391 ~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (513)
.++..|+|||++.+..++.++||||||+++|||++|+.||...+.... + .. .... ..... ..
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~----~~-~~~~-----~~~~~------~~ 239 (297)
T cd06659 178 VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA--M----KR-LRDS-----PPPKL------KN 239 (297)
T ss_pred ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--H----HH-Hhcc-----CCCCc------cc
Confidence 388999999999888899999999999999999999999975443211 0 00 0000 00000 00
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 471 EAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 471 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....+..+.+++.+||+.+|++||+++++++
T Consensus 240 ~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 240 AHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 1123456899999999999999999999998
No 254
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6.8e-38 Score=303.17 Aligned_cols=254 Identities=26% Similarity=0.406 Sum_probs=196.9
Q ss_pred CceecccCceEEEEEEeC----CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCC------ceE
Q 010309 230 NRLLGDSKTGGTYSGILP----DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG------DRY 297 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------~~~ 297 (513)
.++||+|+||.||+|... +++.||||++.... ....+++.+|+.+++.++||||+++++++.... ..+
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 83 (273)
T cd05074 4 GRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPM 83 (273)
T ss_pred hhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceE
Confidence 456899999999999853 36889999997542 234567889999999999999999999886542 237
Q ss_pred EEEeeccCCCHHHHhccCC--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccccc
Q 010309 298 IVYEFVVNGPLDRWLHHIP--RGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLS 375 (513)
Q Consensus 298 lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~ 375 (513)
+++||+.+|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 84 VILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred EEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECccccc
Confidence 8999999999998875321 1223578999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccc
Q 010309 376 KFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRY 454 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (513)
+...............+++.|++||.+....++.++||||||+++|||++ |.+||...+... .... ......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~---~~~~----~~~~~~ 233 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE---IYNY----LIKGNR 233 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH---HHHH----HHcCCc
Confidence 86643322111112225678999999988889999999999999999999 888887544321 1111 000000
Q ss_pred cccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 455 LELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
. ......+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 234 -------~------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 234 -------L------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -------C------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 00112345799999999999999999999999999876
No 255
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.7e-38 Score=307.34 Aligned_cols=262 Identities=25% Similarity=0.401 Sum_probs=201.0
Q ss_pred CHHHHHHHhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhc-CCCcEeeeeeEEee
Q 010309 215 TTEELRSITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYD 292 (513)
Q Consensus 215 ~~~~l~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 292 (513)
..+++..++++|.... .||+|+||.||++... +++.+|+|++.... .....+.+|+.+++++ +||||+++++++..
T Consensus 13 ~~~~~~~~~~~y~~~~-~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 13 GLESLGDPTDTWEIIE-TIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hcccCCCCCCCeEEEE-EeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 3345555566665544 5699999999999974 68899999986542 2345678899999999 89999999999875
Q ss_pred C-----CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCe
Q 010309 293 H-----GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 367 (513)
Q Consensus 293 ~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~ 367 (513)
. +..++||||+++++|.+++.........+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCE
Confidence 4 357999999999999998865433446789999999999999999999999 99999999999999999999
Q ss_pred EEecccccccCCccccccceeecCcccccccccccccC-----CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhH
Q 010309 368 HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRN-----ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIF 442 (513)
Q Consensus 368 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~ 442 (513)
||+|||++.......... ....++..|+|||++... .++.++|||||||++|||++|++||...+.. ..+.
T Consensus 168 kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~--~~~~ 243 (291)
T cd06639 168 KLVDFGVSAQLTSTRLRR--NTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV--KTLF 243 (291)
T ss_pred EEeecccchhcccccccc--cCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH--HHHH
Confidence 999999988654322211 112378899999988643 3678999999999999999999999765431 1111
Q ss_pred HhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 443 EWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.. .. .. .+.+ ..+......+.++|.+||+.+|++||++.++++
T Consensus 244 ~~----~~-~~-----~~~~------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 244 KI----PR-NP-----PPTL------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HH----hc-CC-----CCCC------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 00 00 00 0000 011223456999999999999999999999985
No 256
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.8e-39 Score=322.16 Aligned_cols=249 Identities=20% Similarity=0.341 Sum_probs=197.8
Q ss_pred hCcccCCceecccCceEEEEEEeC-CCCEEEEEEeccc----chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCc--e
Q 010309 224 KNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS----SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGD--R 296 (513)
Q Consensus 224 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~--~ 296 (513)
..|.....+||+|+|-+||+|.+. +|..||--.++.. +....+.|..|+.+|+.|+||||+++|.++.+... .
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~i 118 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTI 118 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCcee
Confidence 445555668999999999999974 4777875555432 23445789999999999999999999999988765 7
Q ss_pred EEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC-CCeEEeccccc
Q 010309 297 YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE-FGAHLMGVGLS 375 (513)
Q Consensus 297 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~~ 375 (513)
.+|+|.+..|+|..|+++. +.++...+..|++||++||.|||++ .|+|+|||||.+||||+.+ |.|||+|+|+|
T Consensus 119 n~iTEL~TSGtLr~Y~kk~----~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLA 193 (632)
T KOG0584|consen 119 NFITELFTSGTLREYRKKH----RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLA 193 (632)
T ss_pred eeeeecccCCcHHHHHHHh----ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHH
Confidence 8899999999999999753 5688899999999999999999997 7889999999999999765 77999999999
Q ss_pred ccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccc
Q 010309 376 KFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYL 455 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (513)
.......... ..|||.|||||++. ..|+...||||||+.++||+|+..||..-... .+ +...+..+..
T Consensus 194 tl~r~s~aks----vIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~--AQ----IYKKV~SGiK- 261 (632)
T KOG0584|consen 194 TLLRKSHAKS----VIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP--AQ----IYKKVTSGIK- 261 (632)
T ss_pred HHhhccccce----eccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH--HH----HHHHHHcCCC-
Confidence 9875443222 33999999999886 78999999999999999999999999754332 11 1111111111
Q ss_pred ccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 456 ELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+.....--.+++++||.+||.. .++|||+.|+|+
T Consensus 262 -----------P~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 262 -----------PAALSKVKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred -----------HHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 1111111245799999999999 999999999986
No 257
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.6e-38 Score=316.61 Aligned_cols=264 Identities=19% Similarity=0.282 Sum_probs=192.4
Q ss_pred HhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC-----
Q 010309 222 ITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH----- 293 (513)
Q Consensus 222 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----- 293 (513)
+.++|.. .+.||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||+++++++...
T Consensus 13 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 13 VPERYQN-LTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhh-heecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 4444444 456799999999999864 68899999997542 22345678899999999999999999987643
Q ss_pred -CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecc
Q 010309 294 -GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGV 372 (513)
Q Consensus 294 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 372 (513)
...++++|++ +++|.+++.. ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC-----QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3468999988 7899888753 4599999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCccccccceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccc-hhHHhhh----
Q 010309 373 GLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQ-SIFEWAT---- 446 (513)
Q Consensus 373 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~-~~~~~~~---- 446 (513)
|++....... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..... .+.....
T Consensus 163 g~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07878 163 GLARQADDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSP 237 (343)
T ss_pred ccceecCCCc-----CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 9998654321 11238899999999876 56889999999999999999999999764422100 0000000
Q ss_pred ---HHhhcccccccccccccCCCCCC---CcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 447 ---PLVQSHRYLELLDPLISSLSSDI---PEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 447 ---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
...........+. .+....... .....++.+.+|+.+||+.||.+|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 238 EVLKKISSEHARKYIQ-SLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHHHhcchhhHHHHhh-ccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000000 000000000 00112345789999999999999999999995
No 258
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=8.6e-38 Score=299.48 Aligned_cols=248 Identities=29% Similarity=0.467 Sum_probs=199.0
Q ss_pred CceecccCceEEEEEEeCC-----CCEEEEEEecccchh-cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 230 NRLLGDSKTGGTYSGILPD-----GSRVAVKRLKRSSFQ-RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
.+.||.|+||.||++...+ +..||+|.+...... ..+.+.+|+..+..++|+||+++++++.+.+..+++|||+
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~ 83 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYM 83 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEecc
Confidence 3467999999999999754 488999999766433 5678999999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
++++|.+++.... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 84 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 84 EGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred CCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 9999999986421 12289999999999999999999999 999999999999999999999999999987654422
Q ss_pred ccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 384 QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
.... ...+++.|+|||.+.+..++.++||||||+++|+|++ |.+||...+.. ..... ......
T Consensus 159 ~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~---~~~~~----~~~~~~-------- 222 (258)
T smart00219 159 YKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE---EVLEY----LKKGYR-------- 222 (258)
T ss_pred cccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH----HhcCCC--------
Confidence 2111 1226789999999988889999999999999999998 78888654321 11111 010000
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQL 503 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 503 (513)
.. .....+.++.+++.+||+.||++|||+.++++.|
T Consensus 223 ----~~-~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 223 ----LP-KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ----CC-CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 00 1112456799999999999999999999999865
No 259
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=9.4e-38 Score=299.22 Aligned_cols=247 Identities=23% Similarity=0.311 Sum_probs=199.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.++||.|+||.||.+... +++.+++|.+.... ......+.+|+.++++++|+||+++++++.+.+..++||||++++
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (256)
T cd08221 5 IRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGG 84 (256)
T ss_pred eeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCC
Confidence 457899999999998854 58899999986542 344567889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.... ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++.........
T Consensus 85 ~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~-- 157 (256)
T cd08221 85 TLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSM-- 157 (256)
T ss_pred cHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccccc--
Confidence 9999997532 35689999999999999999999999 9999999999999999999999999999866443311
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....+++.|+|||.+.+..++.++||||||+++|||++|..||...+... ...... ... .
T Consensus 158 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------~~~~~~-~~~--------~---- 218 (256)
T cd08221 158 AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN------LVVKIV-QGN--------Y---- 218 (256)
T ss_pred ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHH-cCC--------C----
Confidence 112237899999999988888999999999999999999999987543211 111110 000 0
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQL 503 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 503 (513)
. ......+.++.+++.+||+.+|.+||++.++++.+
T Consensus 219 ~-~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 219 T-PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred C-CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 0 01123456799999999999999999999998753
No 260
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.2e-37 Score=298.57 Aligned_cols=246 Identities=22% Similarity=0.329 Sum_probs=196.2
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC-CceEEEEeecc
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH-GDRYIVYEFVV 304 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-~~~~lv~e~~~ 304 (513)
..+.||+|++|.||++... +++.||+|.+.... ....+.+.+|+.++++++|||++++++.+... ...++||||++
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (257)
T cd08223 4 FVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCE 83 (257)
T ss_pred EEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccC
Confidence 3457899999999999965 47899999997542 23446788999999999999999999987644 45789999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+++|.+++... ....+++.++..++.|++.||++||+. +++|+||||+||+++.++.++|+|||++.........
T Consensus 84 ~~~l~~~l~~~--~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~ 158 (257)
T cd08223 84 GGDLYHKLKEQ--KGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDM 158 (257)
T ss_pred CCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccCCc
Confidence 99999998652 235689999999999999999999999 9999999999999999999999999999766432211
Q ss_pred cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 385 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
.....+++.|+|||++.+..++.++||||||+++|+|++|+.||...+.. ........ .. +
T Consensus 159 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~------~~~~~~~~-~~--------~-- 219 (257)
T cd08223 159 --ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN------SLVYRIIE-GK--------L-- 219 (257)
T ss_pred --cccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHh-cC--------C--
Confidence 11223788999999999888999999999999999999999998754321 11111111 00 0
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. ..+...++.+.+++.+||+.||++||++.++++
T Consensus 220 --~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 220 --P-PMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred --C-CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 112235567999999999999999999999985
No 261
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=7.6e-38 Score=304.41 Aligned_cols=256 Identities=23% Similarity=0.386 Sum_probs=196.2
Q ss_pred HHHHHhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhc-CCCcEeeeeeEEee---
Q 010309 218 ELRSITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYD--- 292 (513)
Q Consensus 218 ~l~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~--- 292 (513)
++....+.|.. .+.||.|+||.||+|... +++.||+|++.... .....+..|+.++.++ +||||+++++++..
T Consensus 10 ~~~~~~~~~~~-~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 87 (282)
T cd06636 10 ALRDPAGIFEL-VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSP 87 (282)
T ss_pred hhcChhhhhhh-heeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccc
Confidence 33333444443 456799999999999974 58899999986543 3345688899999998 79999999999853
Q ss_pred ---CCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEE
Q 010309 293 ---HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHL 369 (513)
Q Consensus 293 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl 369 (513)
.+..+++|||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|
T Consensus 88 ~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 88 PGHDDQLWLVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred cCCCCEEEEEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEE
Confidence 456799999999999999986522 34588889999999999999999999 9999999999999999999999
Q ss_pred ecccccccCCccccccceeecCcccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHh
Q 010309 370 MGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY-----RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEW 444 (513)
Q Consensus 370 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~ 444 (513)
+|||++......... .....+++.|+|||.+. ...++.++||||||+++|||++|..||....... ....
T Consensus 163 ~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~--~~~~- 237 (282)
T cd06636 163 VDFGVSAQLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR--ALFL- 237 (282)
T ss_pred eeCcchhhhhccccC--CCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh--hhhh-
Confidence 999998765322111 11223888999999886 3457889999999999999999999996543210 0000
Q ss_pred hhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 445 ATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
..... ........++..+.+||.+||+.||.+||++.||++
T Consensus 238 ------------~~~~~----~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 238 ------------IPRNP----PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ------------HhhCC----CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00000 011112235667999999999999999999999974
No 262
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.9e-38 Score=302.72 Aligned_cols=247 Identities=26% Similarity=0.444 Sum_probs=199.8
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
+.||+|++|.||++... +++.||+|.+.... ......+.+|++++++++||||+++++.+...+..++|+||+++++|
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 86 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSL 86 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcH
Confidence 45799999999999975 58999999987653 23456789999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD-KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
.+++.... ..+++..+..++.|++.||+|||+ . +++|+||||+||+++.++.++|+|||.+..........
T Consensus 87 ~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~-- 158 (265)
T cd06605 87 DKILKEVQ---GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT-- 158 (265)
T ss_pred HHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc--
Confidence 99996522 568999999999999999999999 8 99999999999999999999999999987654322111
Q ss_pred eecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCC
Q 010309 388 VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSS 467 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (513)
..++..|+|||.+.+..++.++||||||+++|+|++|..||...+... ....+....... ....
T Consensus 159 --~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~-------------~~~~ 222 (265)
T cd06605 159 --FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP-DGIFELLQYIVN-------------EPPP 222 (265)
T ss_pred --ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHHHhc-------------CCCC
Confidence 337889999999998899999999999999999999999997653210 111111111111 1111
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 468 DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 468 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
..+....+.++.++|.+||..||++|||+.+++.
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 223 RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 1222225677999999999999999999999985
No 263
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=9.2e-38 Score=302.16 Aligned_cols=250 Identities=24% Similarity=0.396 Sum_probs=194.8
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchh----------cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEE
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ----------RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYI 298 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 298 (513)
.+.||.|++|.||+|... +|+.||+|.++..... ..+.+.+|+.+++.++||||+++++++...+..++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (272)
T cd06629 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSI 85 (272)
T ss_pred cceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEE
Confidence 457899999999999864 6899999988642110 12457889999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccC
Q 010309 299 VYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 378 (513)
Q Consensus 299 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~ 378 (513)
||||+++++|.+++... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus 86 v~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 86 FLEYVPGGSIGSCLRTY----GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred EEecCCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 99999999999998642 4689999999999999999999999 9999999999999999999999999999865
Q ss_pred CccccccceeecCcccccccccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccc
Q 010309 379 PWEVMQERTVMAGGTYGYLAPEFVYRNE--LTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLE 456 (513)
Q Consensus 379 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (513)
.............++..|+|||.+.... ++.++|+||||+++|+|++|..||...+.. ....+ ......
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~----~~~~~~--- 229 (272)
T cd06629 159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI--AAMFK----LGNKRS--- 229 (272)
T ss_pred cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH--HHHHH----hhcccc---
Confidence 4322111122233788999999987654 789999999999999999999998643321 01110 000000
Q ss_pred cccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 457 LLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.... .......++..+.+++.+||+.+|++|||+++|++
T Consensus 230 --~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 230 --APPI----PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred --CCcC----CccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 0000 01111234567999999999999999999999985
No 264
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-39 Score=318.17 Aligned_cols=248 Identities=24% Similarity=0.350 Sum_probs=204.6
Q ss_pred CceecccCceEEEEEEeCC--CC--EEEEEEecccchh-cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILPD--GS--RVAVKRLKRSSFQ-RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
.++||+|.||.|++|.|.. |+ .||||.++..... ...+|++|+.+|.+|+|||+++|||+..+ ....||||+++
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap 193 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP 193 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence 4578999999999999853 43 6999999877554 56899999999999999999999999887 67889999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
.|+|.+.|++ .....|.......++.|||.||.||.++ ++|||||..+|+||-..-.+||+|||+.+.+......
T Consensus 194 lGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 194 LGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred cchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 9999999986 3446688889999999999999999999 9999999999999999889999999999988654332
Q ss_pred cce-eecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 385 ERT-VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 385 ~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
... ....-...|.|||.+....++.+||||+|||+||||+| |..||-+.....+.+. +|.
T Consensus 269 Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~----------------iD~-- 330 (1039)
T KOG0199|consen 269 YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKN----------------IDA-- 330 (1039)
T ss_pred eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHh----------------ccc--
Confidence 211 11124678999999999999999999999999999999 8889887654321111 110
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQL 503 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 503 (513)
......+..++++++++++.||..+|++|||+..|.+.+
T Consensus 331 --~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 331 --GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred --cccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 001223456889999999999999999999999998433
No 265
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.4e-37 Score=302.98 Aligned_cols=263 Identities=19% Similarity=0.261 Sum_probs=195.8
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|++|.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++......++||||++++
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 85 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHT 85 (286)
T ss_pred eeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCcc
Confidence 456799999999999976 58999999986542 223456789999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|..++.. ...+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++..........
T Consensus 86 ~l~~~~~~----~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~- 157 (286)
T cd07847 86 VLNELEKN----PRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY- 157 (286)
T ss_pred HHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCcccc-
Confidence 88887643 34589999999999999999999999 99999999999999999999999999998765432111
Q ss_pred eeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHH-hhhHH-------hhccccc-c
Q 010309 387 TVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFE-WATPL-------VQSHRYL-E 456 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~-~~~~~-------~~~~~~~-~ 456 (513)
....++..|+|||.+.+ ..++.++||||||+++|+|++|..||.+....+...... ..... ....... .
T Consensus 158 -~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07847 158 -TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKG 236 (286)
T ss_pred -cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccc
Confidence 11226788999999876 457889999999999999999999998654321110000 00000 0000000 0
Q ss_pred cccccccCCCC-CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 457 LLDPLISSLSS-DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 457 ~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
...+....... .......+..+.+|+.+||+.||++||++.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 237 LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00000000000 0000123567899999999999999999999875
No 266
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1e-37 Score=299.05 Aligned_cols=243 Identities=26% Similarity=0.447 Sum_probs=196.6
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc-----hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-----FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
.+.||+|++|.||+|... +++.|++|.+.... ....+.+.+|+.+++.++||||+++++++.+....++|+||+
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELV 84 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEec
Confidence 457899999999999976 78999999986543 123467889999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
++++|.+++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++........
T Consensus 85 ~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~ 157 (258)
T cd06632 85 PGGSLAKLLKK----YGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF 157 (258)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecccccc
Confidence 99999999864 24588999999999999999999999 999999999999999999999999999886543321
Q ss_pred ccceeecCcccccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 384 QERTVMAGGTYGYLAPEFVYRNE-LTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
.....++..|+|||.+.... ++.++|+||||+++|+|++|..||...... ... ........ .
T Consensus 158 ---~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~--~~~----~~~~~~~~--------~ 220 (258)
T cd06632 158 ---AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV--AAV----FKIGRSKE--------L 220 (258)
T ss_pred ---ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH--HHH----HHHHhccc--------C
Confidence 11223788999999987766 899999999999999999999999764421 001 00000000 0
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. ..+...++.+.+++.+||+.+|++||++.+++.
T Consensus 221 ----~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 ----P-PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ----C-CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0 011224567899999999999999999999985
No 267
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.8e-38 Score=313.82 Aligned_cols=250 Identities=19% Similarity=0.229 Sum_probs=192.0
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||.||++..+ +++.||+|++.+.. ......+.+|+.++..++|+||+++++.+.+.+..++||||+++
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~ 85 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVG 85 (332)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCC
Confidence 456799999999999975 47889999996532 12234578899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|.+++... ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++.........
T Consensus 86 g~L~~~l~~~---~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~- 158 (332)
T cd05623 86 GDLLTLLSKF---EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV- 158 (332)
T ss_pred CcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCCcc-
Confidence 9999999642 34689999999999999999999999 9999999999999999999999999998765332211
Q ss_pred ceeecCcccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 386 RTVMAGGTYGYLAPEFVY-----RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
......||+.|+|||++. ...++.++|||||||++|||++|+.||...+... .......... ..
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~------~~~~i~~~~~--~~--- 227 (332)
T cd05623 159 QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHKE--RF--- 227 (332)
T ss_pred eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH------HHHHHhCCCc--cc---
Confidence 111234899999999986 3467889999999999999999999997654321 1111111000 00
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSM--RPRMSHVVHQ 502 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 502 (513)
.. + ......+.++.+|+.+|+..+|.+ |++++++++.
T Consensus 228 ~~----p-~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 228 QF----P-AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred cC----C-CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 00 0 001234667899999998665444 6889988764
No 268
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-39 Score=318.57 Aligned_cols=243 Identities=23% Similarity=0.366 Sum_probs=201.5
Q ss_pred ecccCceEEEEEEeCC-CCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHHH
Q 010309 233 LGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 311 (513)
Q Consensus 233 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 311 (513)
||.|+||.||+|..++ +-..|.|++...+....++++-|++||..+.||+||+|++.|+..+.++|+.|||.||..+.+
T Consensus 40 LGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDai 119 (1187)
T KOG0579|consen 40 LGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAI 119 (1187)
T ss_pred hcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHH
Confidence 5999999999999765 445678888877777889999999999999999999999999999999999999999999988
Q ss_pred hccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeecC
Q 010309 312 LHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG 391 (513)
Q Consensus 312 l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 391 (513)
+.. -++.+.+.++.-+++|++.||.|||++ +|||||||+.|||++-+|.++|+|||.+...... ........
T Consensus 120 mlE---L~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t--~qkRDsFI 191 (1187)
T KOG0579|consen 120 MLE---LGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST--RQKRDSFI 191 (1187)
T ss_pred HHH---hccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhH--Hhhhcccc
Confidence 864 347799999999999999999999999 9999999999999999999999999998765432 22233445
Q ss_pred cccccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 392 GTYGYLAPEFVY-----RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 392 gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
|||.|||||+.. ..+|+.++||||||++|.||..+.+|....++.. -+...+ . +..+
T Consensus 192 GTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMR--VllKia-----K-----------SePP 253 (1187)
T KOG0579|consen 192 GTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMR--VLLKIA-----K-----------SEPP 253 (1187)
T ss_pred CCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHH--HHHHHh-----h-----------cCCC
Confidence 999999999875 4689999999999999999999999976554321 111000 0 0001
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....+...+..+.+++.+||..||..||++.++++
T Consensus 254 TLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 254 TLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred cccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 11224456778999999999999999999999986
No 269
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.8e-37 Score=299.21 Aligned_cols=245 Identities=22% Similarity=0.366 Sum_probs=190.6
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc-----hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--CceEEEEe
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-----FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH--GDRYIVYE 301 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lv~e 301 (513)
.++||+|+||.||+|... ++..||+|.+.... ......+.+|+.+++.++||||+++++++.+. ...++++|
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e 86 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFME 86 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEe
Confidence 457799999999999874 58999999986432 12335688899999999999999999988753 56789999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
|+++++|.+++.. ...+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 87 ~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd06651 87 YMPGGSVKDQLKA----YGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 159 (266)
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccccccc
Confidence 9999999999864 24588999999999999999999999 9999999999999999999999999998765432
Q ss_pred ccc-cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 382 VMQ-ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 382 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
... .......++..|+|||++.+..++.++||||||+++|||++|+.||...+... .. ..... ....+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~--~~----~~~~~-----~~~~~ 228 (266)
T cd06651 160 CMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA--AI----FKIAT-----QPTNP 228 (266)
T ss_pred cccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH--HH----HHHhc-----CCCCC
Confidence 111 11112237889999999988889999999999999999999999997543210 00 00000 00001
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
..+...++.+.+++ +||..+|++||+++||++
T Consensus 229 --------~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 229 --------QLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred --------CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 11223455677787 688899999999999975
No 270
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-37 Score=303.53 Aligned_cols=248 Identities=22% Similarity=0.399 Sum_probs=195.5
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEeccc-chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.+.||+|+||.||++... ++..||+|.+... .......+.+|+.++++++||||+++++.+...+..++||||+++++
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGS 85 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCC
Confidence 346799999999999975 6899999998754 22334678899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|..++... .....+++..+..++.|++.||.|||+.. +++|+||||+||+++.++.++|+|||++.........
T Consensus 86 l~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~--- 159 (286)
T cd06622 86 LDKLYAGG-VATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAK--- 159 (286)
T ss_pred HHHHHHhc-cccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccc---
Confidence 99988642 12346899999999999999999999632 8999999999999999999999999998765332211
Q ss_pred eecCcccccccccccccCC------CCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccc
Q 010309 388 VMAGGTYGYLAPEFVYRNE------LTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPL 461 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~~------~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (513)
...+++.|+|||.+.+.. ++.++|||||||++|+|++|..||....... ....... .....
T Consensus 160 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~---------~~~~~ 226 (286)
T cd06622 160 -TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN---IFAQLSA---------IVDGD 226 (286)
T ss_pred -cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh---HHHHHHH---------HhhcC
Confidence 123788999999986543 4789999999999999999999996543211 1110000 00000
Q ss_pred ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 462 ISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. ... +..++.++.++|.+||+.+|++||+++++++
T Consensus 227 ~----~~~-~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 227 P----PTL-PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred C----CCC-CcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 0 111 2236678999999999999999999999987
No 271
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=9.9e-38 Score=303.66 Aligned_cols=247 Identities=25% Similarity=0.439 Sum_probs=191.4
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccch-hcHHHHHHHHHH-HhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF-QRKKEFYSEIGR-FARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
+.||+|+||.||++... +|+.||||+++.... .....+..|+.+ ++.++||||+++++++..++..++||||++ ++
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~ 85 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TS 85 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-cc
Confidence 45799999999999975 599999999976532 234456667665 566689999999999999999999999995 68
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++.........+++..++.++.|++.||+|||++. +++||||||+||+++.++.+||+|||++.........
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~--- 160 (283)
T cd06617 86 LDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK--- 160 (283)
T ss_pred HHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccccccccc---
Confidence 98888654444467999999999999999999999753 8999999999999999999999999999865432211
Q ss_pred eecCccccccccccccc----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 388 VMAGGTYGYLAPEFVYR----NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~----~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
....++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||...... ...+ ..... .
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~----~~~~~---------~--- 223 (283)
T cd06617 161 TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-FQQL----KQVVE---------E--- 223 (283)
T ss_pred ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-HHHH----HHHHh---------c---
Confidence 11237889999998865 45688999999999999999999998653221 0111 11000 0
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.....+...+++++.++|.+||..+|++||+++++++
T Consensus 224 -~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 224 -PSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred -CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011122235677999999999999999999999986
No 272
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-38 Score=310.53 Aligned_cols=259 Identities=20% Similarity=0.283 Sum_probs=204.6
Q ss_pred HHHHHhhCcccCCceecccCceEEEEEEeCCCCEEEEEEeccc--chhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCC
Q 010309 218 ELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRS--SFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHG 294 (513)
Q Consensus 218 ~l~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 294 (513)
++..+.+..++.-+.||+||.+.||++...+.+.||+|.+... +.+....|.+|+..|.+| .|.+||+|++|-..++
T Consensus 354 ~~i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~ 433 (677)
T KOG0596|consen 354 EIIKVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDG 433 (677)
T ss_pred eeEEECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCc
Confidence 4445555566666788999999999999988899999987543 445567899999999999 5999999999999999
Q ss_pred ceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccc
Q 010309 295 DRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGL 374 (513)
Q Consensus 295 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 374 (513)
.+|||||+= ..+|..+|.+. ...++.-.++.+..|++.|+.++|.+ ||||.||||.|+|+-.. .+||+|||+
T Consensus 434 ~lYmvmE~G-d~DL~kiL~k~---~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVkG-~LKLIDFGI 505 (677)
T KOG0596|consen 434 YLYMVMECG-DIDLNKILKKK---KSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVKG-RLKLIDFGI 505 (677)
T ss_pred eEEEEeecc-cccHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEee-eEEeeeech
Confidence 999999986 67999999752 23344347888999999999999999 99999999999999664 799999999
Q ss_pred cccCCccccccceeecCcccccccccccccC-----------CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHH
Q 010309 375 SKFVPWEVMQERTVMAGGTYGYLAPEFVYRN-----------ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFE 443 (513)
Q Consensus 375 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~ 443 (513)
|..+..+.........+||+.||+||.+... ..+.+|||||||||||+|+.|+.||..... ..
T Consensus 506 A~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-----~~- 579 (677)
T KOG0596|consen 506 ANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-----QI- 579 (677)
T ss_pred hcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-----HH-
Confidence 9998877766666666799999999998642 256789999999999999999999975321 11
Q ss_pred hhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 444 WATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.++..+.++...-..+..++ ..++.++++.||..||.+|||+.+||+
T Consensus 580 --------aKl~aI~~P~~~Iefp~~~~---~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 580 --------AKLHAITDPNHEIEFPDIPE---NDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred --------HHHHhhcCCCccccccCCCC---chHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 11223333322111122222 123999999999999999999999986
No 273
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.2e-37 Score=298.39 Aligned_cols=245 Identities=20% Similarity=0.344 Sum_probs=197.7
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEeccc--chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|+||.||++... +|+.||+|.+... .....+++.+|+.++++++||||+++++++...+..++||||++++
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGG 84 (256)
T ss_pred EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCC
Confidence 356799999999999864 6889999998653 2234467899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. .....+++.+++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...........
T Consensus 85 ~l~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (256)
T cd08218 85 DLYKKINA--QRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR 159 (256)
T ss_pred cHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence 99998864 2234578999999999999999999999 999999999999999999999999999986644322111
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
...+++.|+|||++.+...+.++|+||||+++++|++|+.||...+.. +....... . ..
T Consensus 160 --~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~~~-~--------~~---- 218 (256)
T cd08218 160 --TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK------NLVLKIIR-G--------SY---- 218 (256)
T ss_pred --hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH------HHHHHHhc-C--------CC----
Confidence 122788899999998888999999999999999999999998754321 11111100 0 00
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. ..+...+.++.++|.+||+.+|++||++.+|++
T Consensus 219 ~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 219 P-PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred C-CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0 011234567999999999999999999999986
No 274
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.2e-37 Score=324.08 Aligned_cols=263 Identities=16% Similarity=0.207 Sum_probs=187.0
Q ss_pred hCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcC------CCcEeeeeeEEeeC-Cc
Q 010309 224 KNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLH------HPNLVAVKGCCYDH-GD 295 (513)
Q Consensus 224 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~nIv~l~~~~~~~-~~ 295 (513)
++|. ..+.||+|+||.||+|... .++.||||+++... .....+..|+.++..++ |.+|+++++++... .+
T Consensus 129 ~~y~-i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~ 206 (467)
T PTZ00284 129 QRFK-ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH 206 (467)
T ss_pred CcEE-EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence 3443 4457799999999999964 57899999996532 22344566777776664 45689999988765 56
Q ss_pred eEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCceEcCCCCCceEecCCC---------
Q 010309 296 RYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD-KVKPHVVHRDIRASNVLLDEEF--------- 365 (513)
Q Consensus 296 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dikp~NIll~~~~--------- 365 (513)
.++|||++ +++|.+++.. ...+++..+..|+.||+.||+|||+ . +|+||||||+|||++.++
T Consensus 207 ~~iv~~~~-g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~~~~~ 278 (467)
T PTZ00284 207 MCIVMPKY-GPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDPVTNR 278 (467)
T ss_pred EEEEEecc-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCccccccccc
Confidence 78999988 7788888854 2469999999999999999999997 6 999999999999998765
Q ss_pred -------CeEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcccc
Q 010309 366 -------GAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCW 438 (513)
Q Consensus 366 -------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~ 438 (513)
.+||+|||.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+....
T Consensus 279 ~~~~~~~~vkl~DfG~~~~~~~~-----~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~ 353 (467)
T PTZ00284 279 ALPPDPCRVRICDLGGCCDERHS-----RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEH 353 (467)
T ss_pred ccCCCCceEEECCCCccccCccc-----cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 4999999987643221 1123489999999999999999999999999999999999999987654322
Q ss_pred chhHHhhhH----Hhhc----cccccccc------cccc-----CCCCC--CCcHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 010309 439 QSIFEWATP----LVQS----HRYLELLD------PLIS-----SLSSD--IPEAGVVQKVVDLVYACTQHVPSMRPRMS 497 (513)
Q Consensus 439 ~~~~~~~~~----~~~~----~~~~~~~~------~~~~-----~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 497 (513)
...+..... .+.. ....++.+ +... ..... .......+.+.+||.+||+.||.+|||++
T Consensus 354 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~ 433 (467)
T PTZ00284 354 LHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNAR 433 (467)
T ss_pred HHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHH
Confidence 221111100 0000 00000000 0000 00000 00011245688999999999999999999
Q ss_pred HHHH
Q 010309 498 HVVH 501 (513)
Q Consensus 498 evl~ 501 (513)
|+++
T Consensus 434 e~L~ 437 (467)
T PTZ00284 434 QMTT 437 (467)
T ss_pred HHhc
Confidence 9987
No 275
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.1e-38 Score=313.38 Aligned_cols=249 Identities=20% Similarity=0.223 Sum_probs=191.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||.||+++.. +++.||+|++.+.. ......+.+|..++..++|+||+++++++.+.+..|+||||+++
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~g 85 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVG 85 (331)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCC
Confidence 456799999999999975 58899999997532 22334578899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++..........
T Consensus 86 g~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 86 GDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred CcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence 9999999642 24689999999999999999999999 99999999999999999999999999997654332211
Q ss_pred ceeecCccccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 386 RTVMAGGTYGYLAPEFVYR-----NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
.....||+.|+|||++.+ +.++.++||||||+++|||++|+.||...+... .............
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~------~~~~i~~~~~~~~---- 228 (331)
T cd05624 160 -SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHEERFQ---- 228 (331)
T ss_pred -eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH------HHHHHHcCCCccc----
Confidence 112348999999999875 467889999999999999999999997644211 1111111000000
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCC--CCCHHHHHH
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSM--RPRMSHVVH 501 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 501 (513)
. ... ....++++.+++.+||..++++ |++++++++
T Consensus 229 -~---p~~--~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 229 -F---PSH--ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred -C---CCc--cccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 0 000 1124567999999999876554 467888764
No 276
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.7e-37 Score=298.61 Aligned_cols=246 Identities=21% Similarity=0.320 Sum_probs=198.0
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEee--CCceEEEEeeccC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYD--HGDRYIVYEFVVN 305 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lv~e~~~~ 305 (513)
+.||.|++|.||++... ++..||+|.+.... ....+.+.+|+.++++++||||+++++++.. ....+++|||+++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~ 85 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEG 85 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccC
Confidence 45799999999999864 68899999987542 2335678899999999999999999998764 3457999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHh-----cCCCCCceEcCCCCCceEecCCCCeEEecccccccCCc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLH-----DKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 380 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH-----~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~ 380 (513)
++|.+++.........+++..++.++.|++.||+||| +. +++|+||+|+||+++.++.+||+|||++.....
T Consensus 86 ~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~ 162 (265)
T cd08217 86 GDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLAKILGH 162 (265)
T ss_pred CCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEecccccccccC
Confidence 9999999764444567999999999999999999999 77 999999999999999999999999999987654
Q ss_pred cccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 381 EVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 381 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
..... ....+++.|+|||.+.+..++.++||||||+++|+|++|..||...+.. .+.. ......
T Consensus 163 ~~~~~--~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~----~~~~~~------- 226 (265)
T cd08217 163 DSSFA--KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL---QLAS----KIKEGK------- 226 (265)
T ss_pred Ccccc--cccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH---HHHH----HHhcCC-------
Confidence 33211 1123789999999999888999999999999999999999999765421 1111 011000
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....+...+..+.+++.+||+.+|++||++.+|++
T Consensus 227 ------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 227 ------FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred ------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 00112235567999999999999999999999986
No 277
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.3e-37 Score=299.94 Aligned_cols=255 Identities=23% Similarity=0.343 Sum_probs=197.7
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--CceEEEEeeccCC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDH--GDRYIVYEFVVNG 306 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lv~e~~~~g 306 (513)
+.||.|++|.||++... +++.+|+|.+..... .....+.+|++++++++||||+++++++.+. +..++||||++++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~ 86 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGG 86 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCC
Confidence 45699999999999974 588999999975432 3456789999999999999999999998654 4679999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.........+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.........
T Consensus 87 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-- 161 (287)
T cd06621 87 SLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG-- 161 (287)
T ss_pred CHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccccccc--
Confidence 99998765434456689999999999999999999999 9999999999999999999999999998765432211
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
...++..|+|||.+.+..++.++||||||+++|+|++|..||....... ....+....... .. .+.+..
T Consensus 162 --~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~-~~-----~~~~~~-- 230 (287)
T cd06621 162 --TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPP-LGPIELLSYIVN-MP-----NPELKD-- 230 (287)
T ss_pred --cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCC-CChHHHHHHHhc-CC-----chhhcc--
Confidence 1237788999999988899999999999999999999999997653210 011111111000 00 000100
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
........++.+.+++.+||+.+|++|||+.||++
T Consensus 231 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 231 EPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 00001234677999999999999999999999987
No 278
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.6e-37 Score=299.82 Aligned_cols=243 Identities=21% Similarity=0.370 Sum_probs=195.3
Q ss_pred CceecccCceEEEEEEe-CCCCEEEEEEecccc-hhcHHHHHHHHHHHhhcC---CCcEeeeeeEEeeCCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLH---HPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
.+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.++++++ ||||+++++++......++||||++
T Consensus 6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06917 6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAE 85 (277)
T ss_pred hhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCC
Confidence 34679999999999996 468999999987542 334567889999999996 9999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+++|.+++.. ..+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.........
T Consensus 86 ~~~L~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06917 86 GGSVRTLMKA-----GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK 157 (277)
T ss_pred CCcHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc
Confidence 9999999853 3689999999999999999999999 9999999999999999999999999999876543321
Q ss_pred cceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 385 ERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
. ....|+..|+|||.+.++ .++.++||||||+++|+|++|..||.......... .. .....
T Consensus 158 ~--~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~-------~~-----~~~~~---- 219 (277)
T cd06917 158 R--STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM-------LI-----PKSKP---- 219 (277)
T ss_pred c--ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh-------cc-----ccCCC----
Confidence 1 122388899999988654 46889999999999999999999997643321000 00 00000
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
........+.++.+++.+||+.||++||++.++++
T Consensus 220 ---~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 220 ---PRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred ---CCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 11111124567999999999999999999999986
No 279
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=8.6e-38 Score=304.33 Aligned_cols=261 Identities=19% Similarity=0.227 Sum_probs=192.3
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch--hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|++|.||+|... +|+.||+|+++.... .....+.+|+.++++++||||+++++++.+.+..++|+||++ +
T Consensus 5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 83 (284)
T cd07839 5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-Q 83 (284)
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-C
Confidence 356799999999999975 689999999975422 223567889999999999999999999999999999999996 5
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. ....+++..++.++.||+.||.|||+. +++|+||||+||+++.++.++|+|||++..........
T Consensus 84 ~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~- 156 (284)
T cd07839 84 DLKKYFDS---CNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCY- 156 (284)
T ss_pred CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCc-
Confidence 78887753 234689999999999999999999999 99999999999999999999999999998654322111
Q ss_pred eeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcc------ccccccc
Q 010309 387 TVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSH------RYLELLD 459 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 459 (513)
....+++.|+|||++.+. .++.++||||||+++|+|+||..|+....+.. ............. ......+
T Consensus 157 -~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07839 157 -SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD--DQLKRIFRLLGTPTEESWPGVSKLPD 233 (284)
T ss_pred -CCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH--HHHHHHHHHhCCCChHHhHHhhhccc
Confidence 112368899999998764 46899999999999999999998865433211 1100000000000 0000000
Q ss_pred c-cccCCCC----CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 460 P-LISSLSS----DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 460 ~-~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. ....... .......++++.+++.+||+.||.+|||++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 234 YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0 0000000 0011234567899999999999999999999985
No 280
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.5e-37 Score=307.51 Aligned_cols=248 Identities=24% Similarity=0.300 Sum_probs=197.5
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchh---cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ---RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|++|.||++... +++.||+|.+...... ..+.+.+|++++..++||||+++++.+.+.+..++||||+.+
T Consensus 6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPG 85 (316)
T ss_pred eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCC
Confidence 356799999999999975 4899999999765332 346788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
++|.+++.. .....+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++..........
T Consensus 86 ~~L~~~~~~--~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 86 GELFRLLQR--QPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred CCHHHHHHh--CCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 999999864 2235689999999999999999999999 99999999999999999999999999987653221100
Q ss_pred ---------------------------ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcccc
Q 010309 386 ---------------------------RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCW 438 (513)
Q Consensus 386 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~ 438 (513)
......|+..|+|||++.+..++.++||||||+++|+|++|..||...+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~- 239 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE- 239 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH-
Confidence 0001237888999999998889999999999999999999999997654321
Q ss_pred chhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCC----HHHHHH
Q 010309 439 QSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPR----MSHVVH 501 (513)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~ 501 (513)
.+ .. ...... ........++.+.+++.+||+.||++||| ++++++
T Consensus 240 -~~----~~---------~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 240 -TF----SN---------ILKKEV----TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred -HH----HH---------HhcCCc----cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 00 00 000000 00011125678999999999999999999 777776
No 281
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.5e-37 Score=300.65 Aligned_cols=250 Identities=22% Similarity=0.380 Sum_probs=196.4
Q ss_pred cCCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCc------eEEE
Q 010309 228 EGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGD------RYIV 299 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~------~~lv 299 (513)
+..+.||+|++|.||+|... +++.+++|++..... ..+.+.+|+.+++++ .||||+++++++..... .++|
T Consensus 9 ~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv 87 (275)
T cd06608 9 ELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLV 87 (275)
T ss_pred eheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEE
Confidence 33467799999999999975 578999999876543 446789999999999 79999999999976554 7999
Q ss_pred EeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCC
Q 010309 300 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVP 379 (513)
Q Consensus 300 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~ 379 (513)
|||+++++|.+++.........+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~ 164 (275)
T cd06608 88 MELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQLD 164 (275)
T ss_pred EEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCccceecc
Confidence 999999999999875433346789999999999999999999999 99999999999999999999999999987654
Q ss_pred ccccccceeecCccccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccc
Q 010309 380 WEVMQERTVMAGGTYGYLAPEFVYR-----NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRY 454 (513)
Q Consensus 380 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (513)
..... .....++..|+|||++.. ..++.++||||||+++|+|++|..||...... ..... ..
T Consensus 165 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~----~~----- 231 (275)
T cd06608 165 STLGR--RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM--RALFK----IP----- 231 (275)
T ss_pred cchhh--hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH--HHHHH----hh-----
Confidence 32211 112237889999998754 34678899999999999999999999754321 01100 00
Q ss_pred cccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 455 LELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....+ ........++.+.+|+.+||..||++|||+.++++
T Consensus 232 -~~~~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 232 -RNPPP------TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred -ccCCC------CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 00000 11112235678999999999999999999999985
No 282
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=3.6e-37 Score=296.30 Aligned_cols=247 Identities=23% Similarity=0.420 Sum_probs=202.1
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.+.||+|++|.||++... +++.||||++..... .....+.+|+..+.+++||||+++++++...+..++||||+++++
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGS 85 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCc
Confidence 457899999999999976 499999999977643 346789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD-KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
|.+++... ..+++..+..++.|++.||+|||+ . +++|+||+|+||+++.++.++|+|||.+...........
T Consensus 86 L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 158 (264)
T cd06623 86 LADLLKKV----GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCN 158 (264)
T ss_pred HHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCCCccc
Confidence 99999642 568999999999999999999999 8 999999999999999999999999999987654332211
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
...++..|+|||.+.+..++.++||||||+++|+|+||..||................ ....
T Consensus 159 --~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~------------~~~~---- 220 (264)
T cd06623 159 --TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC------------DGPP---- 220 (264)
T ss_pred --ceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh------------cCCC----
Confidence 1227889999999988889999999999999999999999997664311111111111 0000
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
...+....+..+.+++.+||+.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 221 PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 11111115567999999999999999999999987
No 283
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.2e-37 Score=301.68 Aligned_cols=244 Identities=23% Similarity=0.362 Sum_probs=198.2
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.+.||+|++|.||++... +++.||+|++........+.+.+|+.+++.++||||+++++++...+..++|+||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L 103 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence 347899999999999964 6889999998765555566788999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.. ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||.+.......... .
T Consensus 104 ~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~--~ 173 (285)
T cd06648 104 TDIVTH-----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRR--K 173 (285)
T ss_pred HHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCccc--c
Confidence 999864 4588999999999999999999999 99999999999999999999999999887554322111 1
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...+++.|+|||.+.+..++.++||||||+++|||++|..||...+.... ...... ...+.. .
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~------~~~~~~------~~~~~~----~- 236 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA------MKRIRD------NLPPKL----K- 236 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH------HHHHHh------cCCCCC----c-
Confidence 22378899999999888899999999999999999999999876432110 110000 000000 0
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.....+..+.+++.+||+.+|++||++.++++
T Consensus 237 -~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 237 -NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred -ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 01124567999999999999999999999996
No 284
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=3.3e-37 Score=297.13 Aligned_cols=253 Identities=22% Similarity=0.334 Sum_probs=200.4
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.+.||.|++|.||+|... ++..+|+|++.... ....+.+.+|+.+++.++|+||+++++.+...+..++|||++++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~ 85 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGS 85 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCc
Confidence 456799999999999964 58899999997543 2345788999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc--
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE-- 385 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~-- 385 (513)
|.+++..... ...+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++..........
T Consensus 86 l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~ 161 (267)
T cd06610 86 LLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRK 161 (267)
T ss_pred HHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccccc
Confidence 9999965221 24689999999999999999999999 99999999999999999999999999987665432221
Q ss_pred ceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 386 RTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
......++..|+|||++... .++.++|+||||+++|+|++|+.||...+... ...... .. ..+..
T Consensus 162 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~--~~~~~~----~~------~~~~~-- 227 (267)
T cd06610 162 VRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK--VLMLTL----QN------DPPSL-- 227 (267)
T ss_pred ccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh--hHHHHh----cC------CCCCc--
Confidence 11222378899999998876 78899999999999999999999997654321 111100 00 00001
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.........++.+.+++.+||+.||++||++.+|++
T Consensus 228 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 228 -ETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred -CCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 011112345678999999999999999999999985
No 285
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3.4e-37 Score=301.60 Aligned_cols=245 Identities=22% Similarity=0.348 Sum_probs=198.8
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.+.||+|+||.||++... ++..||+|.+........+.+.+|+.+++.++||||+++++.+...+..++|+||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L 103 (293)
T cd06647 24 FEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSL 103 (293)
T ss_pred eeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcH
Confidence 356799999999999864 6889999998765555567789999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.. ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......... .
T Consensus 104 ~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~--~ 173 (293)
T cd06647 104 TDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--S 173 (293)
T ss_pred HHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccccc--c
Confidence 999864 3578899999999999999999999 99999999999999999999999999987654332211 1
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...+++.|+|||.+....++.++||||||+++|++++|+.||...+....... ... . .....
T Consensus 174 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~------~~~--------~----~~~~~ 235 (293)
T cd06647 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IAT--------N----GTPEL 235 (293)
T ss_pred cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee------hhc--------C----CCCCC
Confidence 12378899999999888889999999999999999999999976443210000 000 0 00011
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
......+..+.+++.+||+.+|++||++.+++..
T Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 236 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1122345679999999999999999999999974
No 286
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.9e-37 Score=297.89 Aligned_cols=249 Identities=19% Similarity=0.335 Sum_probs=197.3
Q ss_pred CceecccCceEEEEEEe-CCCCEEEEEEecccch------hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 230 NRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSF------QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
.++||+|++|.||++.. .+++.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~ 84 (268)
T cd06630 5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEW 84 (268)
T ss_pred cceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEec
Confidence 35679999999999985 5689999999975421 1246788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC-CeEEecccccccCCcc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF-GAHLMGVGLSKFVPWE 381 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~-~~kl~Dfg~~~~~~~~ 381 (513)
+++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++ .++|+|||.+......
T Consensus 85 ~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 85 MAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred cCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 999999999864 24688999999999999999999999 999999999999998776 5999999999876543
Q ss_pred cccc--ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccc
Q 010309 382 VMQE--RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLD 459 (513)
Q Consensus 382 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (513)
.... ......++..|+|||.+.+..++.++||||||+++|+|++|..||.......... .......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~---~~~~~~~--------- 225 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA---LIFKIAS--------- 225 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH---HHHHHhc---------
Confidence 2111 1111237889999999988888999999999999999999999996543211111 0000000
Q ss_pred ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 460 PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.......+...++++.+++.+||+.+|++||++.++++
T Consensus 226 ----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 226 ----ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ----cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 00011122345678999999999999999999999984
No 287
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.7e-37 Score=297.24 Aligned_cols=244 Identities=20% Similarity=0.300 Sum_probs=196.7
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|++|.||++... +++.+|||.+.... ......+.+|+.+++.++||||+++++.+...+..++||||++++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd08220 5 IRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGG 84 (256)
T ss_pred EEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCC
Confidence 456899999999999864 68899999987543 234567889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC-CeEEecccccccCCcccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF-GAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~-~~kl~Dfg~~~~~~~~~~~~ 385 (513)
+|.+++... ....+++..+..++.|++.||+|||++ +++|+||+|+||+++.++ .+||+|||.+..........
T Consensus 85 ~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 85 TLAEYIQKR--CNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred CHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence 999999652 234589999999999999999999999 999999999999998654 57999999998765432211
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
...++..|+|||.+.+..++.++||||||+++|+|++|..||...+... ... .... ...
T Consensus 160 ---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~---~~~---~~~~---------~~~--- 218 (256)
T cd08220 160 ---TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA---LVL---KIMS---------GTF--- 218 (256)
T ss_pred ---ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH---HHH---HHHh---------cCC---
Confidence 1237889999999988888999999999999999999999997654321 110 0000 000
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. ..+...+..+.+++.+||+.+|++|||+.++++
T Consensus 219 -~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 219 -A-PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -C-CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0 011224567999999999999999999999985
No 288
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.4e-37 Score=302.37 Aligned_cols=262 Identities=19% Similarity=0.267 Sum_probs=192.1
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
..+.||+|++|.||+|... +++.||||.+..... .....+.+|+.++++++||||+++++++.+.+..++||||+. +
T Consensus 9 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 87 (291)
T cd07844 9 KLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-T 87 (291)
T ss_pred EEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC-C
Confidence 3457799999999999975 689999999875432 223457789999999999999999999999999999999997 4
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++... ...+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.+||+|||+++.........
T Consensus 88 ~L~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~- 160 (291)
T cd07844 88 DLKQYMDDC---GGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY- 160 (291)
T ss_pred CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCCccc-
Confidence 999988642 24689999999999999999999999 99999999999999999999999999987543221111
Q ss_pred eeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhc---cc---------
Q 010309 387 TVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQS---HR--------- 453 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~--------- 453 (513)
....++..|+|||++.+ ..++.++||||||+++|+|++|+.||....... ............ ..
T Consensus 161 -~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 161 -SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE--DQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred -cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH--HHHHHHHHhcCCCChhhhhhhhhccc
Confidence 11126788999999875 457899999999999999999999997554210 000000000000 00
Q ss_pred ccccccccc--cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 454 YLELLDPLI--SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 454 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
......... ...............+.+++.+||+.+|++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000000000 000000001111257889999999999999999999875
No 289
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.3e-37 Score=297.10 Aligned_cols=245 Identities=22% Similarity=0.348 Sum_probs=191.8
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc-----hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--CceEEEEe
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-----FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH--GDRYIVYE 301 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lv~e 301 (513)
.++||+|+||.||+|... ++..||||.+.... ....+.+.+|+.++++++||||+++++++.+. ...++|||
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFME 86 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEE
Confidence 457899999999999974 58999999886421 12245788899999999999999999988764 45789999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
|+++++|.+++.. ...+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 87 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 87 HMPGGSIKDQLKS----YGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred ecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 9999999999864 23578899999999999999999999 9999999999999999999999999999865432
Q ss_pred ccc-cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 382 VMQ-ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 382 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
... .......++..|+|||++.+..++.++||||||+++|||++|+.||...+... .. ..... .+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~----~~~~~--------~~ 225 (265)
T cd06652 160 CLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA--AI----FKIAT--------QP 225 (265)
T ss_pred cccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH--HH----HHHhc--------CC
Confidence 111 11112237889999999988889999999999999999999999997543210 00 00000 00
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. ....+...+..+.+++.+|+. +|++||++++|++
T Consensus 226 ~-----~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 226 T-----NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred C-----CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0 111123456678899999995 9999999999985
No 290
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.5e-37 Score=303.23 Aligned_cols=264 Identities=18% Similarity=0.216 Sum_probs=196.0
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchh-----cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ-----RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
.+.||+|++|.||+|... +++.||||.+...... ....+..|+++++.++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM 84 (298)
T ss_pred eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc
Confidence 346799999999999975 5899999999765432 2355778999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
+++|.+++... ...+++..+..++.||++||+|||++ +++|+||+|+||+++.++.++|+|||++........
T Consensus 85 -~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 157 (298)
T cd07841 85 -ETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR 157 (298)
T ss_pred -CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCCCc
Confidence 99999999642 13699999999999999999999999 999999999999999999999999999987654321
Q ss_pred ccceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccc-hhHHhhhHH-----hhcccccc
Q 010309 384 QERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQ-SIFEWATPL-----VQSHRYLE 456 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~ 456 (513)
.. ....+++.|+|||.+.+ ..++.++||||||+++|||++|.+||......... ......... ........
T Consensus 158 ~~--~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (298)
T cd07841 158 KM--THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPD 235 (298)
T ss_pred cc--cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccc
Confidence 11 11126778999998865 45789999999999999999998887654432110 110000000 00000000
Q ss_pred cccccc-cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 457 LLDPLI-SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 457 ~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
...... ............+.++.++|.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 236 YVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000 0000000112345789999999999999999999999984
No 291
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2e-37 Score=301.95 Aligned_cols=261 Identities=18% Similarity=0.241 Sum_probs=196.7
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|++|.||+|... +|+.||+|++.... ......+.+|+.++++++||||+++++++...+..++||||+ ++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~ 83 (286)
T cd07832 5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PS 83 (286)
T ss_pred EeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CC
Confidence 356799999999999974 68999999997653 233467899999999999999999999999999999999999 99
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++... ...+++.+++.++.||+.||+|||+. +++|+||||+||+++.++.++|+|||++..........
T Consensus 84 ~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~- 156 (286)
T cd07832 84 DLSEVLRDE---ERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRL- 156 (286)
T ss_pred CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCc-
Confidence 999998642 25699999999999999999999999 99999999999999999999999999998765432111
Q ss_pred eeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhc------------cc
Q 010309 387 TVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQS------------HR 453 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------------~~ 453 (513)
.....++..|+|||.+.+. .++.++||||||+++|||++|.+||........ .......... ..
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 157 YSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ---LAIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred cccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH---HHHHHHHcCCCChHHHhhccCcch
Confidence 1122378899999998654 468999999999999999999888865443211 1111000000 00
Q ss_pred ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 454 YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
......+..............+..+.+++.+||+.||++|||++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000000000000000123478999999999999999999999985
No 292
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=4.3e-37 Score=298.39 Aligned_cols=242 Identities=21% Similarity=0.366 Sum_probs=196.6
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.+.||+|+||.||+|... ++..||||.+.... ......+.+|+.++.+++||||+++++.+..++..++||||+++++
T Consensus 9 ~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 88 (277)
T cd06641 9 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 88 (277)
T ss_pred heeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCc
Confidence 446799999999999864 68899999986543 2334678899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++.. ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++..........
T Consensus 89 l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~-- 158 (277)
T cd06641 89 ALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-- 158 (277)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchhhh--
Confidence 9999853 4589999999999999999999999 99999999999999999999999999987654332111
Q ss_pred eecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCC
Q 010309 388 VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSS 467 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (513)
....++..|+|||.+.+...+.++|+||||+++|+|++|..||....... . ... ..... .
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~---~---~~~-~~~~~-------------~ 218 (277)
T cd06641 159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK---V---LFL-IPKNN-------------P 218 (277)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH---H---HHH-HhcCC-------------C
Confidence 11237888999999988888999999999999999999999987543211 0 000 00000 0
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 468 DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 468 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.......+.++.+++.+||+.+|.+||++.++++
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 219 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0111234567899999999999999999999998
No 293
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.1e-37 Score=304.87 Aligned_cols=251 Identities=20% Similarity=0.283 Sum_probs=196.4
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||.||++... .++.||+|.+..... ...+.+.+|+.+++.++||||+++++.+..++..++||||+++
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g 85 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEG 85 (305)
T ss_pred eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCC
Confidence 356799999999999975 478999999876532 2345788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc--
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM-- 383 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~-- 383 (513)
++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||+++.......
T Consensus 86 ~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 86 GDCATLLKN----IGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 999999954 24689999999999999999999999 999999999999999999999999999874211100
Q ss_pred -----------ccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcc
Q 010309 384 -----------QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSH 452 (513)
Q Consensus 384 -----------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 452 (513)
........++..|+|||.+.+..++.++||||||+++|||++|..||.+..... +.. .... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~---~~~---~~~~-~ 231 (305)
T cd05609 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE---LFG---QVIS-D 231 (305)
T ss_pred ccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHH---HHHh-c
Confidence 000011236788999999988889999999999999999999999997543221 111 0000 0
Q ss_pred cccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 453 RYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
....+ . .....+.++.++|.+||+.||++||++.++++.|+.
T Consensus 232 ---~~~~~-------~-~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 232 ---DIEWP-------E-GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred ---ccCCC-------C-ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 00000 0 011345678999999999999999997777766654
No 294
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.8e-37 Score=297.06 Aligned_cols=242 Identities=21% Similarity=0.281 Sum_probs=195.5
Q ss_pred ecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 233 LGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 233 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
||.|++|.||+++.. +++.||+|++..... ...+.+.+|+.+++.++||||+++++.+.+++..++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 599999999999975 489999999975432 2346789999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++........ ..
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~---~~ 150 (262)
T cd05572 81 WTILRD----RGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK---TW 150 (262)
T ss_pred HHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc---cc
Confidence 999964 24589999999999999999999999 999999999999999999999999999987654321 11
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...++..|+|||.+.+..++.++|+||||+++|+|++|..||....... ............ ..
T Consensus 151 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~-------------~~ 213 (262)
T cd05572 151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIYNDILKGNG-------------KL 213 (262)
T ss_pred cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHHHHHhccCC-------------CC
Confidence 2237889999999988889999999999999999999999997655311 010110000000 00
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPR-----MSHVVH 501 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 501 (513)
..+...++++.++|.+||+.+|++||+ +.|+++
T Consensus 214 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 214 EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 111122567999999999999999999 777765
No 295
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=284.19 Aligned_cols=244 Identities=23% Similarity=0.399 Sum_probs=195.6
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccch-hcHHHHHHHHHHHhhcC-CCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLH-HPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.||.|..|.|++.+.. .|...|||.+.+... ...++++..+.++.+.+ .|.||+.+|+|..+...++.||.| ..-+
T Consensus 99 dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM-s~C~ 177 (391)
T KOG0983|consen 99 DLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM-STCA 177 (391)
T ss_pred hhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH-HHHH
Confidence 4699999999999965 589999999987643 34467788888777664 899999999999999999999998 4456
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
+.++.. ...++++..+-++...+++||.||-+++ +|+|||+||+|||+|..|++||+|||++-.+.....+....
T Consensus 178 ekLlkr---ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsA 252 (391)
T KOG0983|consen 178 EKLLKR---IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSA 252 (391)
T ss_pred HHHHHH---hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccccccccc
Confidence 666653 3467999999999999999999999876 99999999999999999999999999998876554443332
Q ss_pred ecCccccccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 389 MAGGTYGYLAPEFVYR---NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~---~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
|.+.|||||.+.- ..|+.++||||||++|+||.||..||.+.+.+ ++......+ -..+.+
T Consensus 253 ---GC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-----Fe~ltkvln------~ePP~L--- 315 (391)
T KOG0983|consen 253 ---GCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-----FEVLTKVLN------EEPPLL--- 315 (391)
T ss_pred ---CCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-----HHHHHHHHh------cCCCCC---
Confidence 8899999999864 46888999999999999999999999875432 111111111 011222
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....++++.+.+++..||..|+.+||...++++
T Consensus 316 ---~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 316 ---PGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred ---CcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 112337889999999999999999999999886
No 296
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=6.3e-37 Score=301.80 Aligned_cols=241 Identities=24% Similarity=0.391 Sum_probs=192.6
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|+.+++.++||||+++.+++.+.+..++||||+.
T Consensus 20 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~- 98 (307)
T cd06607 20 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL- 98 (307)
T ss_pred heeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-
Confidence 346799999999999975 589999999864422 234578899999999999999999999999999999999996
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|.+++... ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 99 g~l~~~~~~~---~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~--- 169 (307)
T cd06607 99 GSASDILEVH---KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN--- 169 (307)
T ss_pred CCHHHHHHHc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCCC---
Confidence 5777776532 24689999999999999999999999 99999999999999999999999999987654321
Q ss_pred ceeecCcccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 386 RTVMAGGTYGYLAPEFVY---RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
...++..|+|||++. ...++.++||||||+++|||+||..||...+.... ...... .
T Consensus 170 ---~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~------~~~~~~-~---------- 229 (307)
T cd06607 170 ---SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQ-N---------- 229 (307)
T ss_pred ---CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH------HHHHhc-C----------
Confidence 123788999999874 35678899999999999999999999876543210 000000 0
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
..........+..+.+++.+||+.||++||++.+|+..
T Consensus 230 --~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 230 --DSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred --CCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00111223456789999999999999999999999873
No 297
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.3e-37 Score=298.68 Aligned_cols=241 Identities=20% Similarity=0.248 Sum_probs=187.0
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccchh---cHHHHHHHHHHHh---hcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ---RKKEFYSEIGRFA---RLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~---~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
+||+|+||.||++... +++.||+|.+.+.... ....+.+|..++. ..+||||+.+++.+...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 3799999999999974 5899999998754221 1233444444333 3479999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+++|.+++.. ...+++..+..++.|++.||+|||+. +|+|+||||+|||++.++.++|+|||++........
T Consensus 81 ~~~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~- 152 (279)
T cd05633 81 GGDLHYHLSQ----HGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 152 (279)
T ss_pred CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc-
Confidence 9999998854 34699999999999999999999999 999999999999999999999999999875533221
Q ss_pred cceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 385 ERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
....|+..|+|||.+.. ..++.++||||||+++|+|++|..||............. ... ..
T Consensus 153 ---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~----~~~------~~----- 214 (279)
T cd05633 153 ---HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR----MTL------TV----- 214 (279)
T ss_pred ---cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHH----Hhh------cC-----
Confidence 12238999999998864 567899999999999999999999997654321111100 000 00
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRP-----RMSHVVH 501 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 501 (513)
....+...+.++.++|.+||+.||++|| |++++++
T Consensus 215 ---~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 215 ---NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred ---CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 0011223566799999999999999999 5998887
No 298
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=4.3e-37 Score=298.41 Aligned_cols=244 Identities=21% Similarity=0.279 Sum_probs=193.0
Q ss_pred ecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 233 LGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 233 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
||+|+||+||++... +|+.||+|.+..... .....+.+|+.++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 599999999999864 589999999975422 2344567899999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++... ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+......... .
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~---~ 152 (277)
T cd05577 81 KYHIYNV--GEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKI---K 152 (277)
T ss_pred HHHHHHc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcc---c
Confidence 9998652 224689999999999999999999999 9999999999999999999999999998765432111 1
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...++..|+|||++.+..++.++||||||+++|+|++|+.||............ .. . .. .. ..
T Consensus 153 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~------~~-~----~~-~~-----~~ 215 (277)
T cd05577 153 GRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEEL------KR-R----TL-EM-----AV 215 (277)
T ss_pred cccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHH------Hh-c----cc-cc-----cc
Confidence 123778999999998888999999999999999999999999765431100000 00 0 00 00 00
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRP-----RMSHVVH 501 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 501 (513)
..+...++.+.++|.+||+.||++|| ++.++++
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 216 EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 11122466799999999999999999 6666764
No 299
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=302.49 Aligned_cols=255 Identities=22% Similarity=0.288 Sum_probs=211.2
Q ss_pred HHHHHhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC
Q 010309 218 ELRSITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDH 293 (513)
Q Consensus 218 ~l~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 293 (513)
|++.++.+.....++||+|+||.||..... +|+.+|.|.+.+... ......++|-.+|.+++.+.||.+-..+++.
T Consensus 178 E~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTk 257 (591)
T KOG0986|consen 178 ELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETK 257 (591)
T ss_pred HhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCC
Confidence 556677777788899999999999998854 699999999876533 2345678899999999999999999999999
Q ss_pred CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccc
Q 010309 294 GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVG 373 (513)
Q Consensus 294 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 373 (513)
+.+++|+..|.||+|.-+|.+. ++..++++.++.++.+|+.||.+||+. +||.|||||+|||+|+.|+++|+|+|
T Consensus 258 d~LClVLtlMNGGDLkfHiyn~--g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLG 332 (591)
T KOG0986|consen 258 DALCLVLTLMNGGDLKFHIYNH--GNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLG 332 (591)
T ss_pred CceEEEEEeecCCceeEEeecc--CCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccc
Confidence 9999999999999999998763 346799999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccc
Q 010309 374 LSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHR 453 (513)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 453 (513)
+|..+......... .||.+|||||++.++.|+...|-|||||+||||+.|..||....+.. ..
T Consensus 333 LAvei~~g~~~~~r---vGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv--------k~------ 395 (591)
T KOG0986|consen 333 LAVEIPEGKPIRGR---VGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV--------KR------ 395 (591)
T ss_pred eEEecCCCCccccc---cCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh--------hH------
Confidence 99988765544333 39999999999999999999999999999999999999997543210 00
Q ss_pred ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 010309 454 YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMS 497 (513)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 497 (513)
+-++.+.... ....+..+++++.+|....|..||++|....
T Consensus 396 --eEvdrr~~~~-~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 396 --EEVDRRTLED-PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred --HHHHHHHhcc-hhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 0111111111 2223356888999999999999999996443
No 300
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2e-37 Score=302.05 Aligned_cols=263 Identities=24% Similarity=0.294 Sum_probs=194.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchh--cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ--RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|++|.||+|... +++.||+|++...... ..+.+.+|+++++.++||||+++++++..++..++||||++++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 85 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHT 85 (286)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCcc
Confidence 456799999999999975 5899999998654322 3457889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|..+... ...+++..++.++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++..........
T Consensus 86 ~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~- 157 (286)
T cd07846 86 VLDDLEKY----PNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY- 157 (286)
T ss_pred HHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcccc-
Confidence 99887643 23589999999999999999999999 99999999999999999999999999988654332211
Q ss_pred eeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCcccc-chhHHhhhHHhhccc----ccccccc
Q 010309 387 TVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCW-QSIFEWATPLVQSHR----YLELLDP 460 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~ 460 (513)
....++..|+|||++.+. .++.++||||||+++|||++|++||......+. ..+............ .......
T Consensus 158 -~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07846 158 -TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAG 236 (286)
T ss_pred -CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhc
Confidence 112278899999998753 468899999999999999999999875443210 000000000000000 0000000
Q ss_pred cc-cCCCCC----CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 461 LI-SSLSSD----IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 461 ~~-~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.. ...... ......+..+.+|+.+||+.+|++||++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 237 MRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred cccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00 000000 001134677999999999999999999999885
No 301
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=5.9e-37 Score=298.80 Aligned_cols=245 Identities=22% Similarity=0.358 Sum_probs=199.2
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
...||+|++|.||+|... ++..||+|++..... ..+.+.+|+++++.++|+||+++++.+...+..++|+||+++++|
T Consensus 24 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 102 (286)
T cd06614 24 LEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSL 102 (286)
T ss_pred hHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcH
Confidence 356799999999999986 689999999976543 567788999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.......... .
T Consensus 103 ~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~--~ 174 (286)
T cd06614 103 TDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKR--N 174 (286)
T ss_pred HHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhh--c
Confidence 99997522 3799999999999999999999999 99999999999999999999999999987654332111 1
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...++..|+|||.+.+..++.++||||||+++|+|++|..||...+.... . ..... .. . ...
T Consensus 175 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~--~----~~~~~-~~--------~---~~~ 236 (286)
T cd06614 175 SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA--L----FLITT-KG--------I---PPL 236 (286)
T ss_pred cccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH--H----HHHHh-cC--------C---CCC
Confidence 12277899999999888899999999999999999999999875443210 0 00000 00 0 011
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.....++..+.++|.+||+.+|.+||++.++++
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 237 KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred cchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 111224567999999999999999999999985
No 302
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-37 Score=309.01 Aligned_cols=246 Identities=21% Similarity=0.327 Sum_probs=203.9
Q ss_pred CcccCCceecccCceEEEEEEeC-CCCEEEEEEecccchhc--HHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEe
Q 010309 225 NFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQR--KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYE 301 (513)
Q Consensus 225 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 301 (513)
+++...+.||+|.|+.|.+|+.. ++..||||.+.+..... .+.+.+|+++|..|+|||||+++.+......+|+|||
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~e 135 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVME 135 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEE
Confidence 34555667899999999999964 59999999998874433 3558999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
|+.+|.+.+++.+ ...+.+..+..++.|+.+|++|||++ +|+|||||++||||+.+.++||+|||++..+...
T Consensus 136 ya~~ge~~~yl~~----~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 136 YASGGELFDYLVK----HGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred eccCchhHHHHHh----cccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeeccc
Confidence 9999999999975 34566688999999999999999999 9999999999999999999999999999988754
Q ss_pred ccccceeecCcccccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 382 VMQERTVMAGGTYGYLAPEFVYRNEL-TTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 382 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
... ...+|++.|.|||++.+..| ++.+|+||+|++||-|+.|..||++..-.+.. ..
T Consensus 209 ~~l---qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr-------------------~r 266 (596)
T KOG0586|consen 209 LML---QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELR-------------------PR 266 (596)
T ss_pred ccc---cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccccc-------------------ch
Confidence 433 34559999999999998876 57999999999999999999999875432111 11
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.+.+... -+.-.+.++.++|+++|-.+|.+|++++++.+
T Consensus 267 vl~gk~r--Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 267 VLRGKYR--IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred heeeeec--ccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 1111001 11224556889999999999999999999876
No 303
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=7.1e-37 Score=294.39 Aligned_cols=248 Identities=27% Similarity=0.426 Sum_probs=198.1
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchh--cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ--RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|++|.||+|... +++.||+|.++..... ..+.+.+|+.+++.++|+||+++++.+...+..++|+||++++
T Consensus 5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGG 84 (264)
T ss_pred eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCC
Confidence 456799999999999964 6899999999766443 5678899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++...........
T Consensus 85 ~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 85 TLEELLEH----GRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred cHHHHHhh----cCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 99999864 24578899999999999999999999 999999999999999999999999999987654322211
Q ss_pred e--eecCcccccccccccccCC---CCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccc
Q 010309 387 T--VMAGGTYGYLAPEFVYRNE---LTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPL 461 (513)
Q Consensus 387 ~--~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (513)
. ....++..|+|||++.+.. .+.++||||||+++|+|++|..||...+.. .... ..... . ..+.
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-~~~~----~~~~~-~-----~~~~ 226 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-FQIM----FHVGA-G-----HKPP 226 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-HHHH----HHHhc-C-----CCCC
Confidence 1 1123788999999998766 789999999999999999999999754321 0000 00000 0 0000
Q ss_pred ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 462 ISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+ ......++.+.+++.+||+.+|++|||+.+++.
T Consensus 227 ~------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 227 I------PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred C------CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 111123567889999999999999999999874
No 304
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.2e-36 Score=301.10 Aligned_cols=246 Identities=23% Similarity=0.400 Sum_probs=194.2
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||.||++... ++..||+|.+..... .....+.+|+.++++++|||++++++++.+++..++||||+.
T Consensus 30 ~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 108 (317)
T cd06635 30 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL- 108 (317)
T ss_pred hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-
Confidence 345799999999999964 688999999875422 234578899999999999999999999999999999999996
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 109 g~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~--- 179 (317)
T cd06635 109 GSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPAN--- 179 (317)
T ss_pred CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCcc---
Confidence 578777653 235689999999999999999999999 99999999999999999999999999987543221
Q ss_pred ceeecCcccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 386 RTVMAGGTYGYLAPEFVY---RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
...+++.|+|||++. .+.++.++||||||+++|||++|..||...+... .. ....... .
T Consensus 180 ---~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~----~~~~~~~---------~ 241 (317)
T cd06635 180 ---SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--AL----YHIAQNE---------S 241 (317)
T ss_pred ---cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH--HH----HHHHhcc---------C
Confidence 123788999999874 4568899999999999999999999987643211 00 0000000 0
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
........++.+.+++.+||+.+|.+||++.++++.+-.+.
T Consensus 242 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 242 ----PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred ----CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 11112234567999999999999999999999998654333
No 305
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=7e-37 Score=299.36 Aligned_cols=262 Identities=22% Similarity=0.271 Sum_probs=193.3
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccchh--cHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--CceEEEEeeccC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ--RKKEFYSEIGRFARLHHPNLVAVKGCCYDH--GDRYIVYEFVVN 305 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lv~e~~~~ 305 (513)
+.||+|++|.||+|... +++.+|+|.++..... ....+.+|+.++++++||||+++++++... +..++||||++
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~- 89 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE- 89 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC-
Confidence 45799999999999975 5889999999754322 234567899999999999999999998877 88999999996
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
++|.+++... ...+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++..........
T Consensus 90 ~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 163 (293)
T cd07843 90 HDLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPY 163 (293)
T ss_pred cCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccCCcccc
Confidence 5999888642 23689999999999999999999999 99999999999999999999999999998765432111
Q ss_pred ceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccch-hHHhh-------hHHhhccc-c-
Q 010309 386 RTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQS-IFEWA-------TPLVQSHR-Y- 454 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~-~~~~~-------~~~~~~~~-~- 454 (513)
....+++.|+|||.+.+. .++.++||||||+++|+|++|.+||.......... +.... .+...... .
T Consensus 164 --~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (293)
T cd07843 164 --TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAK 241 (293)
T ss_pred --ccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhc
Confidence 112267889999998764 46889999999999999999999997654321110 00000 00000000 0
Q ss_pred -cccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 455 -LELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 455 -~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
...............+....++.+.++|.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 242 KKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000000000011111113667899999999999999999999985
No 306
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2e-37 Score=297.35 Aligned_cols=243 Identities=21% Similarity=0.311 Sum_probs=197.8
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||.|+||.||++... +++.||+|.+.+... ...+.+.+|++++++++||||+++++.+.+++..++|+||+.+
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 84 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLG 84 (258)
T ss_pred EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCC
Confidence 457899999999999975 589999999976432 3457889999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+.........
T Consensus 85 ~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~- 156 (258)
T cd05578 85 GDLRYHLSQ----KVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLT- 156 (258)
T ss_pred CCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCccc-
Confidence 999999964 24689999999999999999999999 9999999999999999999999999999876543211
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+......+. ..... .
T Consensus 157 --~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----~~~~~--------~----- 217 (258)
T cd05578 157 --TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIR----AKQET--------A----- 217 (258)
T ss_pred --cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHH----HHhcc--------c-----
Confidence 1223788999999998888999999999999999999999999866532111111 00000 0
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCCCH--HHHH
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRPRM--SHVV 500 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl 500 (513)
....+...+..+.++|.+||+.||.+||++ +|++
T Consensus 218 -~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 218 -DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 111122345779999999999999999999 5554
No 307
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-38 Score=285.79 Aligned_cols=255 Identities=20% Similarity=0.271 Sum_probs=203.7
Q ss_pred HHhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeC----C
Q 010309 221 SITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDH----G 294 (513)
Q Consensus 221 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~----~ 294 (513)
.++.+|....++||-|-.|.|-....+ +++++|+|++... ...++|+++.-.. .|||||.+++++++. .
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 467778888889999999999988864 6899999998543 4456788766555 699999999998753 4
Q ss_pred ceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecC---CCCeEEec
Q 010309 295 DRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE---EFGAHLMG 371 (513)
Q Consensus 295 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~---~~~~kl~D 371 (513)
.+.+|||.|+||.|...+++ ++...+++.++-.|.+||..|+.|||+. +|.||||||+|+|.+. |-.+||+|
T Consensus 133 cLLiVmE~meGGeLfsriq~--~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtD 207 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQD--RGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTD 207 (400)
T ss_pred eeEeeeecccchHHHHHHHH--cccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecc
Confidence 56899999999999999976 4557799999999999999999999999 9999999999999964 44589999
Q ss_pred ccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhc
Q 010309 372 VGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQS 451 (513)
Q Consensus 372 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 451 (513)
||+|+..... ......+-|+.|.|||++...+|+...|+||+||++|-|++|.+||.......+. .-.+..+..
T Consensus 208 fGFAK~t~~~---~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ais---pgMk~rI~~ 281 (400)
T KOG0604|consen 208 FGFAKETQEP---GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS---PGMKRRIRT 281 (400)
T ss_pred cccccccCCC---ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCC---hhHHhHhhc
Confidence 9999876532 2334456899999999999999999999999999999999999999765432111 001111111
Q ss_pred ccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 452 HRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+.+ ..+.......++...++|+.+|..+|.+|.|++++++
T Consensus 282 gqy----------~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 282 GQY----------EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred cCc----------cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 110 0123334578899999999999999999999999986
No 308
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=6.3e-37 Score=299.27 Aligned_cols=239 Identities=23% Similarity=0.324 Sum_probs=195.4
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|++|.||++... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 85 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPG 85 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCC
Confidence 457899999999999975 58999999997542 23346788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+|||++.++.+||+|||++......
T Consensus 86 ~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---- 154 (290)
T cd05580 86 GELFSHLRK----SGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---- 154 (290)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----
Confidence 999999864 25689999999999999999999999 9999999999999999999999999999876443
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
.....+++.|+|||.+.+...+.++||||||+++|+|++|..||...+.. .... ... ... .
T Consensus 155 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~---~~~-~~~------~----- 215 (290)
T cd05580 155 -TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI---QIYE---KIL-EGK------V----- 215 (290)
T ss_pred -CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---HHHH---HHh-cCC------c-----
Confidence 11223889999999998888899999999999999999999999765421 0000 000 000 0
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRP-----RMSHVVH 501 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 501 (513)
..+...+..+.+++.+||+.||.+|| +++++++
T Consensus 216 ---~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 216 ---RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ---cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 01112356789999999999999999 7777763
No 309
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=6.6e-37 Score=298.58 Aligned_cols=265 Identities=23% Similarity=0.282 Sum_probs=196.8
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
..+.||+|++|.||+|... +++.||||.++... ....+.+.+|++++++++|+||+++++++...+..++||||+++
T Consensus 5 ~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~ 84 (288)
T cd07833 5 VLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVER 84 (288)
T ss_pred EEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCC
Confidence 3456799999999999975 58899999987542 23346789999999999999999999999999999999999988
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
+.|..++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++..........
T Consensus 85 ~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 157 (288)
T cd07833 85 TLLELLEAS----PGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPASP 157 (288)
T ss_pred CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccc
Confidence 777665532 34589999999999999999999999 99999999999999999999999999998765443211
Q ss_pred ceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccc-hhHHhhhHHhhccccccccccccc
Q 010309 386 RTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQ-SIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
. ....++..|+|||++.+. .++.++||||||+++|+|++|.+||......... ...................++...
T Consensus 158 ~-~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07833 158 L-TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFA 236 (288)
T ss_pred c-cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccc
Confidence 1 112378889999999887 7899999999999999999999999764332100 000000000000000000000000
Q ss_pred C-----CC-----CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 464 S-----LS-----SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 464 ~-----~~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. .. ....+..++.++.+||.+||+.+|++|||++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 237 GVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0 00 00011123678999999999999999999999875
No 310
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=7.6e-37 Score=298.85 Aligned_cols=243 Identities=22% Similarity=0.353 Sum_probs=197.2
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHH
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 309 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 309 (513)
..||+|++|.||++... +++.||||.+..........+.+|+.+++.++|+||+++++.+...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 35799999999999874 68999999987655555677899999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceee
Q 010309 310 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 389 (513)
Q Consensus 310 ~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 389 (513)
+++.. ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++......... ...
T Consensus 106 ~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~--~~~ 175 (292)
T cd06657 106 DIVTH-----TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKS 175 (292)
T ss_pred HHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccccc--ccc
Confidence 98753 3588999999999999999999999 9999999999999999999999999998765432211 112
Q ss_pred cCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCC
Q 010309 390 AGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDI 469 (513)
Q Consensus 390 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (513)
..+++.|+|||.+.+..++.++|+||||+++|+|++|..||...+....... .. ......+.
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~-------~~-----~~~~~~~~------ 237 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM-------IR-----DNLPPKLK------ 237 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-------HH-----hhCCcccC------
Confidence 2378899999999888889999999999999999999999876433211100 00 00011110
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 470 PEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 470 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.....+..+.+++.+||+.||.+||++.++++
T Consensus 238 ~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 238 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 01123456889999999999999999999987
No 311
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=4.7e-37 Score=299.11 Aligned_cols=257 Identities=21% Similarity=0.291 Sum_probs=193.4
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch--hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||.|++|.||+|+.. +|+.||||.+..... .....+.+|++++++++||||+++++++.+.+..++||||+. +
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~ 83 (284)
T cd07860 5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q 83 (284)
T ss_pred eeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-c
Confidence 346799999999999975 689999999875432 233578899999999999999999999999999999999995 6
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++... ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++..........
T Consensus 84 ~l~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~- 157 (284)
T cd07860 84 DLKKFMDAS--PLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 157 (284)
T ss_pred CHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccc-
Confidence 898888652 235689999999999999999999999 99999999999999999999999999987654322111
Q ss_pred eeecCcccccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhc--------------
Q 010309 387 TVMAGGTYGYLAPEFVYRNE-LTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQS-------------- 451 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-------------- 451 (513)
....+++.|+|||++.+.. ++.++||||||+++|||+||+.||...+... ............
T Consensus 158 -~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 158 -THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred -ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 1122678899999887644 5889999999999999999999997644321 111100000000
Q ss_pred -ccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 452 -HRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 452 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
..+.......... .....++++.++|.+||+.||++|||++++++
T Consensus 235 ~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 235 KPSFPKWARQDFSK-----VVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HhhcccccccCHHH-----HcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0000000000000 00123467889999999999999999999984
No 312
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.4e-36 Score=296.83 Aligned_cols=262 Identities=18% Similarity=0.218 Sum_probs=190.5
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.+.||+|+||.||+|... +|+.||+|++..... .....+.+|+.+++.++|+||+++++++..++..++||||+. ++
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~ 88 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TD 88 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CC
Confidence 456799999999999864 689999999975432 223467889999999999999999999999999999999995 67
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++.. ....+++..+..++.|++.||.|||+. +|+|+||||+|||++.++.++|+|||+++.........
T Consensus 89 l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~-- 160 (291)
T cd07870 89 LAQYMIQ---HPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY-- 160 (291)
T ss_pred HHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC--
Confidence 7776643 124578888999999999999999999 99999999999999999999999999987643322111
Q ss_pred eecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhh-----------HHhhccccc
Q 010309 388 VMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWAT-----------PLVQSHRYL 455 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 455 (513)
....+++.|+|||++.+. .++.++||||||+++|||++|..||...+... ..+..... .........
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07870 161 SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF-EQLEKIWTVLGVPTEDTWPGVSKLPNYK 239 (291)
T ss_pred CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH-HHHHHHHHHcCCCChhhhhhhhhccccc
Confidence 112268899999998754 57889999999999999999999997654321 11100000 000000000
Q ss_pred ccccccc-cC-CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 456 ELLDPLI-SS-LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 456 ~~~~~~~-~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....... .. ..........+..+.+++.+|+..||++|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 240 PEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred chhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000000 00 0000000012457889999999999999999999874
No 313
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=9.8e-37 Score=306.34 Aligned_cols=266 Identities=20% Similarity=0.304 Sum_probs=196.2
Q ss_pred HhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEeccc--chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC-----
Q 010309 222 ITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH----- 293 (513)
Q Consensus 222 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----- 293 (513)
+.+.|.. .+.||+|+||.||+|... +|+.||||.+... .......+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~-~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQN-LKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEE-EEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 4455554 456799999999999964 6899999998653 223345678899999999999999999988644
Q ss_pred -CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecc
Q 010309 294 -GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGV 372 (513)
Q Consensus 294 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 372 (513)
...++||||+. ++|.+.+.. .++...+..++.|++.||+|||+. +++||||||+||+++.++.+||+||
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Df 162 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQM------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 162 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccC
Confidence 35699999995 588887742 288999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcccc-chhHH--------
Q 010309 373 GLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCW-QSIFE-------- 443 (513)
Q Consensus 373 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~-~~~~~-------- 443 (513)
|++......... ....++..|+|||.+.+..++.++||||||+++|+|++|+.||...+.... ..+..
T Consensus 163 g~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
T cd07850 163 GLARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDE 239 (353)
T ss_pred ccceeCCCCCCC---CCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 999866433221 112378899999999999999999999999999999999999976543110 00000
Q ss_pred ---hhh----HHhhcc------cccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 444 ---WAT----PLVQSH------RYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 444 ---~~~----~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
... ...... .+.+..................+..+.++|.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 240 FMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000 000000 0001111111000011112234667899999999999999999999985
No 314
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.3e-36 Score=298.87 Aligned_cols=267 Identities=18% Similarity=0.256 Sum_probs=193.4
Q ss_pred ceecccCceEEEEEEeC---CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--CceEEEEee
Q 010309 231 RLLGDSKTGGTYSGILP---DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH--GDRYIVYEF 302 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lv~e~ 302 (513)
+.||+|++|.||+|... +++.||+|.+.... ......+.+|+.++.+++||||+++++++.+. +..++||||
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 85 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDY 85 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeC
Confidence 45799999999999975 47899999998742 23346778899999999999999999999988 789999999
Q ss_pred ccCCCHHHHhccCCCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecC----CCCeEEeccccccc
Q 010309 303 VVNGPLDRWLHHIPRG-GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE----EFGAHLMGVGLSKF 377 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~----~~~~kl~Dfg~~~~ 377 (513)
+++ +|.+++...... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++..
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~ 161 (316)
T cd07842 86 AEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGLARL 161 (316)
T ss_pred CCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCccccc
Confidence 964 677766543322 23789999999999999999999999 9999999999999999 89999999999987
Q ss_pred CCccccc-cceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccch------hHHhhhHHh
Q 010309 378 VPWEVMQ-ERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQS------IFEWATPLV 449 (513)
Q Consensus 378 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~------~~~~~~~~~ 449 (513)
....... .......+++.|+|||++.+. .++.++||||||+++|+|++|.+||.......... .........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (316)
T cd07842 162 FNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVL 241 (316)
T ss_pred cCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHh
Confidence 6433221 111122378889999988764 57899999999999999999999997654432000 000000000
Q ss_pred h------------cccccccccccccCCCC-CCC----cH--HHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 450 Q------------SHRYLELLDPLISSLSS-DIP----EA--GVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 450 ~------------~~~~~~~~~~~~~~~~~-~~~----~~--~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. ........+........ ... .. ..+.++.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 242 GTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred CCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0 00000000000000000 000 00 23457899999999999999999999985
No 315
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.7e-36 Score=289.10 Aligned_cols=245 Identities=24% Similarity=0.390 Sum_probs=200.3
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.+.||+|++|.||++... +++.+++|++..........+.+|+.++++++||||+++++++...+..++++||+++++|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L 84 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSL 84 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcH
Confidence 346799999999999975 6899999999876555667899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++... ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+........ ..
T Consensus 85 ~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~ 155 (253)
T cd05122 85 KDLLKST---NQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---RN 155 (253)
T ss_pred HHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc---cc
Confidence 9998652 25689999999999999999999998 999999999999999999999999999987654332 11
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...++..|+|||.+.+..++.++||||||+++|+|++|..||...+...... .. ...... ..
T Consensus 156 ~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~------~~-~~~~~~-----------~~ 217 (253)
T cd05122 156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF------KI-ATNGPP-----------GL 217 (253)
T ss_pred ceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH------HH-HhcCCC-----------Cc
Confidence 2237889999999988888999999999999999999999987653211000 00 000000 00
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
......+..+.+++.+||+.||++|||+.++++
T Consensus 218 ~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 218 RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 011112567999999999999999999999985
No 316
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=6.1e-37 Score=299.01 Aligned_cols=249 Identities=23% Similarity=0.403 Sum_probs=190.4
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcC-CCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLH-HPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.||+|+||.||++... +++.||+|.+.... ......+.+|+.++.++. ||||+++++++..++..+++|||+. ++|
T Consensus 11 ~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~-~~l 89 (288)
T cd06616 11 EIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD-ISL 89 (288)
T ss_pred HhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc-CCH
Confidence 5799999999999964 58999999997543 234567889999999996 9999999999999999999999985 466
Q ss_pred HHHhccC-CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 309 DRWLHHI-PRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 309 ~~~l~~~-~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
.++.... ......+++..+..++.|++.||+|||+.. +++||||||+||+++.++.++|+|||++..........
T Consensus 90 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~-- 165 (288)
T cd06616 90 DKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKT-- 165 (288)
T ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccc--
Confidence 5543211 122356999999999999999999999632 89999999999999999999999999987654322111
Q ss_pred eecCcccccccccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 388 VMAGGTYGYLAPEFVYRN---ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
...+++.|+|||++.+. .++.++||||||+++|||++|+.||..... ..+....... ...+.+
T Consensus 166 -~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~------~~~~~~-- 231 (288)
T cd06616 166 -RDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-----VFDQLTQVVK------GDPPIL-- 231 (288)
T ss_pred -cccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-----HHHHHhhhcC------CCCCcC--
Confidence 12378899999998766 688999999999999999999999875431 1111111000 000111
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.......++.++.+|+.+||+.||++|||+++|++
T Consensus 232 --~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 232 --SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred --CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01111235678999999999999999999999986
No 317
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.2e-36 Score=297.87 Aligned_cols=264 Identities=19% Similarity=0.239 Sum_probs=191.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch--hcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCc-----eEEEE
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGD-----RYIVY 300 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~-----~~lv~ 300 (513)
.+.||+|+||.||+|... +++.||||.++.... .....+.+|+.+++.+ +||||+++++++...+. .|+||
T Consensus 6 ~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~ 85 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVF 85 (295)
T ss_pred eeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEe
Confidence 456799999999999975 689999999865422 2335788899999999 46999999999887666 79999
Q ss_pred eeccCCCHHHHhccCCCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecC-CCCeEEecccccccC
Q 010309 301 EFVVNGPLDRWLHHIPRG-GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE-EFGAHLMGVGLSKFV 378 (513)
Q Consensus 301 e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~Dfg~~~~~ 378 (513)
||+++ +|.+++...... ...+++..++.++.||+.||.|||+. +++||||||+||+++. ++.+||+|||++...
T Consensus 86 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~ 161 (295)
T cd07837 86 EYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLGRAF 161 (295)
T ss_pred eccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecccceec
Confidence 99975 898888653322 35689999999999999999999999 9999999999999998 889999999998765
Q ss_pred CccccccceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhh--ccccc
Q 010309 379 PWEVMQERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQ--SHRYL 455 (513)
Q Consensus 379 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~ 455 (513)
....... ....+++.|+|||++.+ ..++.++||||||+++|+|++|..||...+... ........... .....
T Consensus 162 ~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 237 (295)
T cd07837 162 SIPVKSY--THEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ--QLLHIFKLLGTPTEQVWP 237 (295)
T ss_pred CCCcccc--CCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHhCCCChhhCc
Confidence 3321111 11126788999998865 457899999999999999999999997654321 11100000000 00000
Q ss_pred cc---cc----ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 456 EL---LD----PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 456 ~~---~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.. .. +..............++++.++|.+||+.||.+||++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 00 000000000001135677999999999999999999999875
No 318
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3.4e-37 Score=296.49 Aligned_cols=246 Identities=20% Similarity=0.317 Sum_probs=196.0
Q ss_pred ecccCceEEEEEEeCC-CCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 233 LGDSKTGGTYSGILPD-GSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 233 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
||.|++|.||++.... |+.||+|.+..... ...+.+.+|+.++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 5899999999999864 99999999976543 3456788999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc----
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ---- 384 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~---- 384 (513)
.+++... ..+++..+..++.||+.||+|||+. +++|+||+|+||+++.++.++|+|||++.........
T Consensus 81 ~~~l~~~----~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLENV----GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 9999642 3689999999999999999999999 9999999999999999999999999998765432110
Q ss_pred --cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccc
Q 010309 385 --ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLI 462 (513)
Q Consensus 385 --~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
.......++..|+|||.......+.++||||||+++|+|++|..||....... ... .... ...
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~---~~~---~~~~-~~~-------- 218 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE---IFQ---NILN-GKI-------- 218 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH---HHH---HHhc-CCc--------
Confidence 01122237788999999988888999999999999999999999997554221 110 0000 000
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 463 SSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 463 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
........+..+.+++.+||+.+|.+|||+.++.+.|+
T Consensus 219 ----~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 219 ----EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred ----CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 00000113567999999999999999999966665554
No 319
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.2e-36 Score=292.32 Aligned_cols=243 Identities=21% Similarity=0.254 Sum_probs=188.7
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccchh---cHHHHHHHHHHH-hhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ---RKKEFYSEIGRF-ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l-~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.||+|++|.||+|... +|+.||||++.+.... ....+..|..++ ...+||||+++++++...+..++|+||++++
T Consensus 3 ~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 82 (260)
T cd05611 3 PISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGG 82 (260)
T ss_pred cCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCC
Confidence 4799999999999874 5899999999764322 223344555444 4458999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----- 150 (260)
T cd05611 83 DCASLIKT----LGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN----- 150 (260)
T ss_pred CHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceecccc-----
Confidence 99999864 24689999999999999999999999 9999999999999999999999999998764321
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
....++..|+|||.+.+..++.++||||||+++|+|++|..||...+... ... .. ..... . .
T Consensus 151 -~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~---~~-~~~~~----~--~---- 212 (260)
T cd05611 151 -KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA---VFD---NI-LSRRI----N--W---- 212 (260)
T ss_pred -ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH---HHH---HH-Hhccc----C--C----
Confidence 11237889999999988888999999999999999999999997644321 111 00 00000 0 0
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
.......+++.+.+++.+||+.||++||++.++.+.|.
T Consensus 213 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 213 PEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred CCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 00011134567999999999999999998766655443
No 320
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.2e-36 Score=288.39 Aligned_cols=247 Identities=25% Similarity=0.374 Sum_probs=200.8
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch--hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--CceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDH--GDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lv~e~~~ 304 (513)
.+.||+|++|.||+|... +++.|++|++..... ...+.+.+|+.++++++||||+++++.+... +..++|+||++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 84 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVS 84 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecC
Confidence 457899999999999976 689999999976543 4467889999999999999999999999988 88999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+++|.+++... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+.........
T Consensus 85 ~~~L~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 85 GGSLSSLLKKF----GKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred CCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 99999999652 3789999999999999999999999 9999999999999999999999999999877654321
Q ss_pred cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccC
Q 010309 385 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISS 464 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (513)
.......++..|+|||.+.....+.++||||||+++|+|++|..||...+.. .......... ..
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~--------~~--- 221 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP-----MAALYKIGSS--------GE--- 221 (260)
T ss_pred ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-----HHHHHhcccc--------CC---
Confidence 1112233788999999998888999999999999999999999999765411 0001000000 00
Q ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 465 LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 465 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....+...+..+.+++.+|++.||++||++.++++
T Consensus 222 --~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 222 --PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred --CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 01111233667999999999999999999999985
No 321
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=4.7e-36 Score=289.45 Aligned_cols=249 Identities=20% Similarity=0.239 Sum_probs=190.3
Q ss_pred HHHHHhhCcccCCce-ecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCC
Q 010309 218 ELRSITKNFSEGNRL-LGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHG 294 (513)
Q Consensus 218 ~l~~~~~~~~~~~~~-lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 294 (513)
+.....+++.....+ ||+|+||.||++..+ ++..+|+|.+........ |+.....+ +||||+++++.+...+
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCC
Confidence 334444454444433 699999999999964 688999999875432211 22222222 7999999999999999
Q ss_pred ceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC-CeEEeccc
Q 010309 295 DRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF-GAHLMGVG 373 (513)
Q Consensus 295 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~-~~kl~Dfg 373 (513)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++ .++|+|||
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg 155 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKK----EGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYG 155 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCc
Confidence 99999999999999999964 23799999999999999999999999 999999999999999998 99999999
Q ss_pred ccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccc
Q 010309 374 LSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHR 453 (513)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 453 (513)
++....... ...++..|+|||++.+..++.++||||||+++|||++|..||........ ....+...
T Consensus 156 ~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~------ 222 (267)
T PHA03390 156 LCKIIGTPS------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL-DLESLLKR------ 222 (267)
T ss_pred cceecCCCc------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh-hHHHHHHh------
Confidence 987654322 12378899999999988899999999999999999999999975433210 00010000
Q ss_pred ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCC-HHHHHH
Q 010309 454 YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPR-MSHVVH 501 (513)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 501 (513)
... ........++.+.++|.+||+.+|.+||+ ++++++
T Consensus 223 ----~~~------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 223 ----QQK------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ----hcc------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 000 00111245677999999999999999996 588874
No 322
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2.4e-36 Score=294.02 Aligned_cols=264 Identities=21% Similarity=0.265 Sum_probs=195.0
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch-hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.+.||.|++|.||+|+.. +|..||||.++.... .....+.+|+.++++++||||+++++++.+.+..++||||+++ +
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~ 83 (284)
T cd07836 5 LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-D 83 (284)
T ss_pred eeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-c
Confidence 346799999999999975 588999999976532 2346678899999999999999999999999999999999975 8
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++..... ...+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||++..........
T Consensus 84 l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~-- 157 (284)
T cd07836 84 LKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTF-- 157 (284)
T ss_pred HHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccc--
Confidence 8888864322 34689999999999999999999999 99999999999999999999999999997654321111
Q ss_pred eecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccch-hHHhhh--------HHhhccccccc
Q 010309 388 VMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQS-IFEWAT--------PLVQSHRYLEL 457 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~-~~~~~~--------~~~~~~~~~~~ 457 (513)
....++..|+|||++.+. .++.++||||||+++|+|++|+.||...+...... ...... .......+...
T Consensus 158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07836 158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPT 237 (284)
T ss_pred ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccc
Confidence 112267889999988664 56889999999999999999999997655321111 110000 00000000000
Q ss_pred ccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 458 LDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
...... ..........+..+.+++.+||+.||.+||++.++++
T Consensus 238 ~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 238 FPRYPP-QDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred ccCCCh-HHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000 0000001124567899999999999999999999984
No 323
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3.4e-36 Score=293.21 Aligned_cols=264 Identities=19% Similarity=0.242 Sum_probs=195.0
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--CceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH--GDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lv~e~~~ 304 (513)
.+.||+|++|.||+|... +++.+|+|++.... ......+.+|+.+++.++|||++++++++... +..++||||++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 83 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD 83 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc
Confidence 346799999999999975 48899999998663 23346788999999999999999999999988 88999999996
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
++|.+++... ...+++..++.++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++.........
T Consensus 84 -~~l~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~ 156 (287)
T cd07840 84 -HDLTGLLDSP---EVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA 156 (287)
T ss_pred -ccHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc
Confidence 4898888642 24689999999999999999999999 9999999999999999999999999999876544321
Q ss_pred cceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccc----
Q 010309 385 ERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLD---- 459 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 459 (513)
.. ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...+........................+
T Consensus 157 ~~-~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07840 157 DY-TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWF 235 (287)
T ss_pred cc-cccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhh
Confidence 11 11226788999998765 4578999999999999999999999976553211110000000000000000000
Q ss_pred ----cc--ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 460 ----PL--ISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 460 ----~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+. ............++..+.+++.+||+.+|++||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 236 ENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00 0000000000112667999999999999999999999985
No 324
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1e-36 Score=291.98 Aligned_cols=245 Identities=20% Similarity=0.375 Sum_probs=195.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|++|.||++... +|..||+|.+.... ....+.+.+|+.+++.++|+||+++++.+...+..++|+||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGG 84 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCC
Confidence 356799999999999975 58899999986542 234467889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCC-eEEecccccccCCcccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG-AHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~-~kl~Dfg~~~~~~~~~~~~ 385 (513)
+|.+++... ....+++..+..++.|++.||.|||+. +++|+||||+||++++++. +||+|||.+.........
T Consensus 85 ~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~- 158 (257)
T cd08225 85 DLMKRINRQ--RGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMEL- 158 (257)
T ss_pred cHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCccc-
Confidence 999998652 234579999999999999999999999 9999999999999998854 699999999876433211
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
.....|++.|+|||++.+..++.++|+||||+++|||++|..||...+.. ........ ....+ .
T Consensus 159 -~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~-----~~~~~----~ 222 (257)
T cd08225 159 -AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH------QLVLKICQ-----GYFAP----I 222 (257)
T ss_pred -ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHhc-----ccCCC----C
Confidence 11223888999999998888999999999999999999999998754321 11111110 00000 0
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....+..+.+++.+||+.+|++|||+.+|++
T Consensus 223 -----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 223 -----SPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -----CCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1123457999999999999999999999985
No 325
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.2e-36 Score=289.53 Aligned_cols=247 Identities=22% Similarity=0.372 Sum_probs=201.7
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch--hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||.|++|.||++... ++..||+|++..... .....+.+|+++++.++|||++++++.+...+..++|+|+++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~ 84 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGG 84 (258)
T ss_pred EeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCC
Confidence 356799999999999975 589999999976533 45567899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.........+++..+..++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||.+.........
T Consensus 85 ~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-- 159 (258)
T cd08215 85 DLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL-- 159 (258)
T ss_pred cHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCcce--
Confidence 99999976443346799999999999999999999999 9999999999999999999999999999876543311
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....+++.|+|||.+.+..++.++|+||||+++++|++|..||...+.. .. ...... . ..
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---~~---~~~~~~-~--------~~---- 220 (258)
T cd08215 160 AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL---EL---ALKILK-G--------QY---- 220 (258)
T ss_pred ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH---HH---HHHHhc-C--------CC----
Confidence 11223788999999998888999999999999999999999998654421 11 111100 0 01
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.. .+...+..+.+++.+||+.+|++|||+.++++
T Consensus 221 ~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 221 PP-IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CC-CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 11134567999999999999999999999985
No 326
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.7e-36 Score=295.07 Aligned_cols=262 Identities=22% Similarity=0.292 Sum_probs=194.3
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch--hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||.|++|.||+|... +|..||+|++..... .....+.+|+.+++.++||||+++++++.+.+..+++|||++ +
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~ 82 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-L 82 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-c
Confidence 346799999999999964 699999999875432 223568899999999999999999999999999999999994 6
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.... ...+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++..........
T Consensus 83 ~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~- 156 (283)
T cd07835 83 DLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTY- 156 (283)
T ss_pred CHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcccc-
Confidence 8999886522 24689999999999999999999999 99999999999999999999999999997654322111
Q ss_pred eeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhc--------cccccc
Q 010309 387 TVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQS--------HRYLEL 457 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 457 (513)
....++..|+|||++.+. .++.++||||||+++|+|++|++||...+... .+.......... ....+.
T Consensus 157 -~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 157 -THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID--QLFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred -CccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChHHhhhhhhchhh
Confidence 111267889999988664 56889999999999999999999997654321 111100000000 000000
Q ss_pred ccccccC--CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 458 LDPLISS--LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 458 ~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....... ..........+..+.+++.+||+.||++|||++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 234 KPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000 0000001224467899999999999999999999985
No 327
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-37 Score=309.67 Aligned_cols=272 Identities=23% Similarity=0.335 Sum_probs=200.1
Q ss_pred cCCceecccCceEEEEEEe-CCCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCC------ceEEE
Q 010309 228 EGNRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG------DRYIV 299 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------~~~lv 299 (513)
+..+.||+|+||.||+|+. ..|+.||||.++... ....+...+|+++|++|+|||||++.++-++.. ...+|
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 3455789999999999995 569999999998754 344577889999999999999999999865543 45899
Q ss_pred EeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEec--CCC--CeEEeccccc
Q 010309 300 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD--EEF--GAHLMGVGLS 375 (513)
Q Consensus 300 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~--~~~--~~kl~Dfg~~ 375 (513)
||||.+|||+..|.+ +.+...|++.+.+.++.++..||.|||++ +|+||||||.||++- .+| ..||+|||.|
T Consensus 96 mEyC~gGsL~~~L~~-PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNS-PENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EeecCCCcHHHHhcC-cccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 999999999999976 45567899999999999999999999999 999999999999993 333 3699999999
Q ss_pred ccCCccccccceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccc
Q 010309 376 KFVPWEVMQERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRY 454 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (513)
+.++.... .....||..|.+||++.. ..|+..+|.|||||++|+.+||..||..........-+.|....-.....
T Consensus 172 rel~d~s~---~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v 248 (732)
T KOG4250|consen 172 RELDDNSL---FTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGV 248 (732)
T ss_pred ccCCCCCe---eeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCce
Confidence 98876542 223349999999999984 78899999999999999999999999765433110001111100000000
Q ss_pred -----cccccccccC--CC-CCCCcHHHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHhcC
Q 010309 455 -----LELLDPLISS--LS-SDIPEAGVVQKVVDLVYACTQHVPSMRP--RMSHVVHQLQQL 506 (513)
Q Consensus 455 -----~~~~~~~~~~--~~-~~~~~~~~~~~l~~li~~cl~~dP~~RP--s~~evl~~L~~~ 506 (513)
.+.-.+.... ++ +..........+-..+..+|..+|++|- ...+....+..+
T Consensus 249 ~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dI 310 (732)
T KOG4250|consen 249 AIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDI 310 (732)
T ss_pred eEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHH
Confidence 0000010000 00 1111234555677888899999999998 555555554433
No 328
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.7e-36 Score=301.09 Aligned_cols=271 Identities=16% Similarity=0.232 Sum_probs=197.7
Q ss_pred HhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccchhc--------------HHHHHHHHHHHhhcCCCcEeee
Q 010309 222 ITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQR--------------KKEFYSEIGRFARLHHPNLVAV 286 (513)
Q Consensus 222 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~nIv~l 286 (513)
+.+.|....++||+|+||.||+|... +++.||||.+....... ...+.+|+++++.++||||+++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 85 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGL 85 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeee
Confidence 34456666678899999999999965 68999999986543221 1257789999999999999999
Q ss_pred eeEEeeCCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCC
Q 010309 287 KGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 366 (513)
Q Consensus 287 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~ 366 (513)
++++...+..++||||+. ++|.+++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~ 157 (335)
T PTZ00024 86 VDVYVEGDFINLVMDIMA-SDLKKVVDR----KIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGI 157 (335)
T ss_pred eEEEecCCcEEEEEeccc-cCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCC
Confidence 999999999999999996 689998853 34589999999999999999999999 9999999999999999999
Q ss_pred eEEecccccccCCcccc------------ccceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCC
Q 010309 367 AHLMGVGLSKFVPWEVM------------QERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAV 433 (513)
Q Consensus 367 ~kl~Dfg~~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~ 433 (513)
++|+|||++........ ........++..|+|||.+.+. .++.++||||||+++|||++|.+||...
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 237 (335)
T PTZ00024 158 CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE 237 (335)
T ss_pred EEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999976541110 0111112267789999998764 4689999999999999999999999766
Q ss_pred Cccccch-hHHhhhHHhhcccccccc-----cccccCCCCC--CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 434 DSVCWQS-IFEWATPLVQSHRYLELL-----DPLISSLSSD--IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 434 ~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+...... +....... ....+.... .+........ ......+.++.+++.+||+.+|++|||+++++.
T Consensus 238 ~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 238 NEIDQLGRIFELLGTP-NEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred CHHHHHHHHHHHhCCC-chhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 5421110 00000000 000000000 0000000000 000123567899999999999999999999986
No 329
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.8e-36 Score=293.27 Aligned_cols=257 Identities=18% Similarity=0.187 Sum_probs=189.6
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcC-CCcEeeeeeEEeeC--CceEEEEeeccC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLH-HPNLVAVKGCCYDH--GDRYIVYEFVVN 305 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~--~~~~lv~e~~~~ 305 (513)
+.||+|+||.||+|... +++.||+|+++... ........+|+.++.++. ||||+++++++.+. +..++||||++
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~- 83 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD- 83 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-
Confidence 45799999999999964 68999999987642 222334567888899885 99999999999987 88999999996
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
++|.+++... ...+++..+..++.|++.||.|||+. +++||||+|+||+++. +.+||+|||++..........
T Consensus 84 ~~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~ 156 (282)
T cd07831 84 MNLYELIKGR---KRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT 156 (282)
T ss_pred ccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence 5888777542 24689999999999999999999999 9999999999999999 999999999998764332211
Q ss_pred ceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhh-----------ccc
Q 010309 386 RTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQ-----------SHR 453 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-----------~~~ 453 (513)
. ..++..|+|||++.. ..++.++|||||||++|||++|..||...+..+. ......... ...
T Consensus 157 ~---~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 157 E---YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ---IAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred C---CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH---HHHHHHHcCCCCHHHHHhhcccc
Confidence 1 227889999997654 5578899999999999999999999976543211 111110000 000
Q ss_pred ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 454 YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
......+..............+..+.++|.+||+.+|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000000000000000001235678999999999999999999999985
No 330
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.1e-36 Score=298.42 Aligned_cols=263 Identities=17% Similarity=0.239 Sum_probs=191.4
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchh--cHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--CceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ--RKKEFYSEIGRFARLHHPNLVAVKGCCYDH--GDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lv~e~~~ 304 (513)
.+.||+|+||.||+|... +|+.||+|+++..... ....+.+|+.++++++|+||+++++++... +..++||||+.
T Consensus 12 ~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 91 (309)
T cd07845 12 LNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE 91 (309)
T ss_pred eeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC
Confidence 446799999999999975 5899999998754322 233567899999999999999999998765 46799999996
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
++|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.........
T Consensus 92 -~~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~ 164 (309)
T cd07845 92 -QDLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP 164 (309)
T ss_pred -CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecCCccCC
Confidence 5888888642 25689999999999999999999999 9999999999999999999999999999876533211
Q ss_pred cceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccc-----c
Q 010309 385 ERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLEL-----L 458 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 458 (513)
. ....++..|+|||.+.+ ..++.++||||||+++|||++|.+||...+....................... .
T Consensus 165 ~--~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
T cd07845 165 M--TPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLV 242 (309)
T ss_pred C--CcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccccc
Confidence 1 11125778999999865 45789999999999999999999999765543211111000000000000000 0
Q ss_pred cc-cccCCC-CC--CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 459 DP-LISSLS-SD--IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 459 ~~-~~~~~~-~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.. .+.... .. ......++.+.++|.+||+.||++|||++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 243 GKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred ccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00 000000 00 000123667899999999999999999999986
No 331
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.8e-36 Score=298.11 Aligned_cols=260 Identities=19% Similarity=0.227 Sum_probs=191.4
Q ss_pred cccCceEEEEEEeCCCCEEEEEEeccc--chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHHH
Q 010309 234 GDSKTGGTYSGILPDGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 311 (513)
Q Consensus 234 g~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 311 (513)
|.|+++.||++.. +++.||||++... .....+.+.+|+.+++.++||||+++++++.+.+..+++|||+++++|.++
T Consensus 11 ~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~ 89 (314)
T cd08216 11 EDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDL 89 (314)
T ss_pred cCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHH
Confidence 4445555555544 6999999999764 334457899999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc-----ccc
Q 010309 312 LHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM-----QER 386 (513)
Q Consensus 312 l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~-----~~~ 386 (513)
+... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+........ ...
T Consensus 90 l~~~--~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~ 164 (314)
T cd08216 90 LKTH--FPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDF 164 (314)
T ss_pred HHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccccccccc
Confidence 9753 234588999999999999999999999 999999999999999999999999998875532211 111
Q ss_pred eeecCccccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHH----hhccc-------
Q 010309 387 TVMAGGTYGYLAPEFVYR--NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPL----VQSHR------- 453 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~----~~~~~------- 453 (513)
.....++..|+|||++.. ..++.++||||||+++|||++|..||....... ...+..... .....
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
T cd08216 165 PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKVRGTVPCLLDKSTYPLYEDS 242 (314)
T ss_pred cccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhccCccccccCchhhhcCC
Confidence 112226778999999876 357889999999999999999999998654321 111110000 00000
Q ss_pred ccc----cccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 454 YLE----LLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 454 ~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
... ...+..............+.++.+|+.+||+.||++|||++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 000 000111001111223356678999999999999999999999987
No 332
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.6e-36 Score=292.07 Aligned_cols=241 Identities=19% Similarity=0.260 Sum_probs=187.3
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccchh---cHHHHHHHH---HHHhhcCCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ---RKKEFYSEI---GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~---~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
+||+|+||.||++... +++.||+|.+.+.... ....+..|. ..+....||||+++++++.+.+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 3799999999999864 5889999998764322 122233443 34444589999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.........
T Consensus 81 g~~L~~~l~~----~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~ 153 (278)
T cd05606 81 GGDLHYHLSQ----HGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 153 (278)
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCc
Confidence 9999998853 34699999999999999999999999 9999999999999999999999999998765432211
Q ss_pred cceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 385 ERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
...|+..|+|||++.++ .++.++||||||+++|||++|+.||............ .... ...
T Consensus 154 ----~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~----~~~~------~~~---- 215 (278)
T cd05606 154 ----ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID----RMTL------TMA---- 215 (278)
T ss_pred ----CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH----HHhh------ccC----
Confidence 22389999999998754 6889999999999999999999999765332111100 0000 000
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRP-----RMSHVVH 501 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 501 (513)
.. .+...+.++.+++.+||..+|.+|| ++.++++
T Consensus 216 ---~~-~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 216 ---VE-LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred ---CC-CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 01 1112356799999999999999999 9999985
No 333
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=3.7e-36 Score=299.05 Aligned_cols=262 Identities=18% Similarity=0.262 Sum_probs=191.4
Q ss_pred eccc--CceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 233 LGDS--KTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 233 lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
||+| +||+||++... +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++||||+.+++
T Consensus 6 ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~ 85 (328)
T cd08226 6 IGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGS 85 (328)
T ss_pred hCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCC
Confidence 4666 99999999974 69999999987542 2234678899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc-
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER- 386 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~- 386 (513)
|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+|||++.++.++++||+.+...........
T Consensus 86 l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 86 ANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred HHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 999987532 24589999999999999999999999 999999999999999999999999986543321111000
Q ss_pred ----eeecCcccccccccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhH-------------
Q 010309 387 ----TVMAGGTYGYLAPEFVYRN--ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATP------------- 447 (513)
Q Consensus 387 ----~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~------------- 447 (513)
.....++..|+|||++.+. .++.++||||||+++|||++|..||....... ........
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ--MLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH--HHHHHhcCCCCCCccccccch
Confidence 0011245679999998764 47899999999999999999999997654321 00000000
Q ss_pred ---Hhhc--ccc----c-cccc-----ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 448 ---LVQS--HRY----L-ELLD-----PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 448 ---~~~~--~~~----~-~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.... ... . .... ..............++..+.+|+.+||+.||++|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0000 000 0 0000 000000011112346778999999999999999999999985
No 334
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.8e-36 Score=290.07 Aligned_cols=245 Identities=23% Similarity=0.331 Sum_probs=200.6
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|++|.||++... +++.+|+|.+.... ......+.+|+.+++.++||||+++++++.+....++||||++++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFG 84 (256)
T ss_pred eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCC
Confidence 346799999999999864 68899999987542 233467788999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.........+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++.........
T Consensus 85 ~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~-- 159 (256)
T cd08530 85 DLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK-- 159 (256)
T ss_pred CHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccCCcc--
Confidence 99999876444446789999999999999999999999 9999999999999999999999999999876544111
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
...++..|+|||.+.+..++.++|+||||+++|+|++|+.||...+...... ...... .
T Consensus 160 --~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~-------~~~~~~--------~---- 218 (256)
T cd08530 160 --TQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRY-------KVQRGK--------Y---- 218 (256)
T ss_pred --cccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------HHhcCC--------C----
Confidence 1237889999999998889999999999999999999999997654321100 000000 0
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.. .....+.++.+++.+||+.+|++||++.++++
T Consensus 219 ~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 219 PP-IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CC-CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11 11245677999999999999999999999985
No 335
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.8e-37 Score=319.03 Aligned_cols=274 Identities=16% Similarity=0.182 Sum_probs=185.2
Q ss_pred HhhCcccCCceecccCceEEEEEEeCC--CCEEEEEEe--------------cc---cchhcHHHHHHHHHHHhhcCCCc
Q 010309 222 ITKNFSEGNRLLGDSKTGGTYSGILPD--GSRVAVKRL--------------KR---SSFQRKKEFYSEIGRFARLHHPN 282 (513)
Q Consensus 222 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~--------------~~---~~~~~~~~~~~E~~~l~~l~h~n 282 (513)
...+|.. .+.||+|+||.||++.... +..+++|.+ .+ ........+.+|+.+|++++|||
T Consensus 146 ~~~~Y~i-i~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 146 FLAHFRV-IDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhccEE-EeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 3444544 3466999999999987532 222222211 11 11123456889999999999999
Q ss_pred EeeeeeEEeeCCceEEEEeeccCCCHHHHhccCC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEe
Q 010309 283 LVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIP-RGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL 361 (513)
Q Consensus 283 Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll 361 (513)
|+++++++...+..|+|+|++ +++|.+++.... ..........+..++.||+.||.|||++ +|+||||||+|||+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl 300 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFL 300 (501)
T ss_pred cCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 999999999999999999999 457777764321 1122344667888999999999999999 99999999999999
Q ss_pred cCCCCeEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCC-CCCCCccccch
Q 010309 362 DEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRP-AQAVDSVCWQS 440 (513)
Q Consensus 362 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p-~~~~~~~~~~~ 440 (513)
+.++.+||+|||++..+........ ....||..|+|||++.+..++.++|||||||++|||++|..+ +.........+
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~ 379 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKEREAFD-YGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ 379 (501)
T ss_pred CCCCCEEEEeCCCceecCccccccc-ccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence 9999999999999987653322111 123389999999999999999999999999999999998754 43322221112
Q ss_pred hHHhhhHHhh-cccc-------cccccc-ccc----CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 441 IFEWATPLVQ-SHRY-------LELLDP-LIS----SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 441 ~~~~~~~~~~-~~~~-------~~~~~~-~~~----~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+......... ...+ .+.+.. ... ...........+..+.++|.+||+.||++|||+.|+++
T Consensus 380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 2111110000 0000 000000 000 00000001123456788999999999999999999986
No 336
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3.3e-36 Score=296.92 Aligned_cols=265 Identities=18% Similarity=0.226 Sum_probs=189.4
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch--hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCc--------eEE
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGD--------RYI 298 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~--------~~l 298 (513)
.+.||+|++|.||+|... +++.||||.+..... .....+.+|+.++++++||||+++++++...+. .++
T Consensus 17 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 96 (310)
T cd07865 17 LAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYL 96 (310)
T ss_pred EEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEE
Confidence 456799999999999975 589999999865422 223456789999999999999999999876543 499
Q ss_pred EEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccC
Q 010309 299 VYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 378 (513)
Q Consensus 299 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~ 378 (513)
||||+. ++|.+++.. ....+++..++.++.|++.||+|||++ +++|+||||+||+++.++.+||+|||++...
T Consensus 97 v~e~~~-~~l~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 169 (310)
T cd07865 97 VFEFCE-HDLAGLLSN---KNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLARAF 169 (310)
T ss_pred EEcCCC-cCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCcccc
Confidence 999995 588887753 224689999999999999999999999 9999999999999999999999999999866
Q ss_pred Ccccccc--ceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccc
Q 010309 379 PWEVMQE--RTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYL 455 (513)
Q Consensus 379 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (513)
....... ......++..|+|||.+.+. .++.++||||||+++|||++|..||...+.....................
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (310)
T cd07865 170 SLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWP 249 (310)
T ss_pred cCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcc
Confidence 4332211 11112367889999988664 46889999999999999999999997654321111111110000000000
Q ss_pred -----cccc------ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 456 -----ELLD------PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 456 -----~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
...+ ...............+..+.+||.+||+.||.+|||++++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 250 GVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred cccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0000 000000000000012346789999999999999999999985
No 337
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=4.4e-36 Score=293.86 Aligned_cols=264 Identities=19% Similarity=0.244 Sum_probs=190.4
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch--hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|++|.||+|... +|+.||+|.+..... .....+.+|++++++++||||+++++++.+.+..++||||++ +
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 85 (294)
T PLN00009 7 VEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-L 85 (294)
T ss_pred EEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-c
Confidence 346799999999999975 689999999865432 234578899999999999999999999999999999999995 5
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecC-CCCeEEecccccccCCcccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE-EFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
+|.+++.. .....+++..+..++.||+.||+|||++ +++|+||+|+||+++. ++.+||+|||++..........
T Consensus 86 ~l~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~ 160 (294)
T PLN00009 86 DLKKHMDS--SPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTF 160 (294)
T ss_pred cHHHHHHh--CCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCCcccc
Confidence 88887754 2233468888999999999999999999 9999999999999985 4568999999997653321111
Q ss_pred ceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCcccc-chhHHhhh-H---Hhhc-ccccccc
Q 010309 386 RTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCW-QSIFEWAT-P---LVQS-HRYLELL 458 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~-~~~~~~~~-~---~~~~-~~~~~~~ 458 (513)
....+++.|+|||++.+. .++.++||||||+++|+|+||.+||...+.... ........ + .+.. ....+..
T Consensus 161 --~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (294)
T PLN00009 161 --THEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYK 238 (294)
T ss_pred --ccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhh
Confidence 112267899999988664 578999999999999999999999976543210 00000000 0 0000 0000000
Q ss_pred c--ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 459 D--PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 459 ~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. +..............++++.+++.+||+.+|++||++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 239 SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 000000000001124567899999999999999999999986
No 338
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1e-35 Score=290.01 Aligned_cols=262 Identities=21% Similarity=0.301 Sum_probs=192.5
Q ss_pred CceecccCceEEEEEEeCC-CCEEEEEEecccch--hcHHHHHHHHHHHhhc---CCCcEeeeeeEEeeCCc-----eEE
Q 010309 230 NRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSF--QRKKEFYSEIGRFARL---HHPNLVAVKGCCYDHGD-----RYI 298 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~-----~~l 298 (513)
.+.||+|++|.||+|.... ++.||+|.++.... .....+.+|+.++.++ +||||+++++++...+. .++
T Consensus 4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 83 (287)
T cd07838 4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTL 83 (287)
T ss_pred EEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEE
Confidence 3467999999999999864 89999999975422 1234566787777665 69999999999998776 899
Q ss_pred EEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccC
Q 010309 299 VYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 378 (513)
Q Consensus 299 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~ 378 (513)
+|||+. ++|.+++.... ...+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus 84 ~~e~~~-~~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 84 VFEHVD-QDLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARIY 157 (287)
T ss_pred Eehhcc-cCHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcceec
Confidence 999996 58988886522 23589999999999999999999999 9999999999999999999999999999876
Q ss_pred CccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccc-hhHHhhhHHhhccccccc
Q 010309 379 PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQ-SIFEWATPLVQSHRYLEL 457 (513)
Q Consensus 379 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 457 (513)
........ ..++..|+|||++.+..++.++||||||+++|||++|.+||......+.. ...+..... ........
T Consensus 158 ~~~~~~~~---~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 233 (287)
T cd07838 158 SFEMALTS---VVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLP-SEEEWPRN 233 (287)
T ss_pred cCCccccc---ccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCC-ChHhcCCC
Confidence 44322111 12678899999999888999999999999999999999998765432111 111000000 00000000
Q ss_pred c---cccccCCCC---CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 458 L---DPLISSLSS---DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 458 ~---~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
. ......... .......++.+.+++.+||+.||++||++++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0 000000000 0011235677899999999999999999999984
No 339
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=3.9e-36 Score=292.29 Aligned_cols=259 Identities=22% Similarity=0.285 Sum_probs=196.5
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccchh--cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ--RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
+.||+|++|.||++... +++.+++|.+...... ....+.+|+.++++++||||+++++++..++..++|+||+++ +
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~ 83 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-D 83 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-C
Confidence 46799999999999975 6889999998765332 356788999999999999999999999999999999999965 8
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||.+......... .
T Consensus 84 l~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~--~ 155 (283)
T cd05118 84 LYKLIKDR---QRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP--Y 155 (283)
T ss_pred HHHHHHhh---cccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc--c
Confidence 88887642 25789999999999999999999999 9999999999999999999999999999876543311 1
Q ss_pred eecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhc---cccccccc----
Q 010309 388 VMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQS---HRYLELLD---- 459 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---- 459 (513)
....++..|+|||.+.+. .++.++||||||+++|+|+||+.||...+....... ....... ........
T Consensus 156 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd05118 156 THYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK---IFRTLGTPDPEVWPKFTSLARN 232 (283)
T ss_pred cCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHcCCCchHhcccchhhhhh
Confidence 112277889999998876 788999999999999999999999976543211100 0000000 00000000
Q ss_pred -----ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 460 -----PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 460 -----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+..............+.++.++|.+||+.||.+||++++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 233 YKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000000000011245778999999999999999999999985
No 340
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=4.7e-36 Score=293.62 Aligned_cols=261 Identities=14% Similarity=0.193 Sum_probs=184.6
Q ss_pred HhhCcccCCceecccCceEEEEEEeCC----CCEEEEEEecccchhc--H---------HHHHHHHHHHhhcCCCcEeee
Q 010309 222 ITKNFSEGNRLLGDSKTGGTYSGILPD----GSRVAVKRLKRSSFQR--K---------KEFYSEIGRFARLHHPNLVAV 286 (513)
Q Consensus 222 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~--~---------~~~~~E~~~l~~l~h~nIv~l 286 (513)
+..+.+...++||+|+||.||+|...+ +..+|+|+........ . .....+...+..+.|+||+++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 333445566788999999999999654 4566777543322111 0 112233445667789999999
Q ss_pred eeEEeeCC----ceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEec
Q 010309 287 KGCCYDHG----DRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 362 (513)
Q Consensus 287 ~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~ 362 (513)
++++.... ..++++|++. .++.+.+.. ....++..+..++.|++.||+|||+. +|+||||||+|||++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~ 160 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKLV-ENTKEIFKR----IKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVD 160 (294)
T ss_pred EEeeeEecCCceEEEEEEehhc-cCHHHHHHh----hccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc
Confidence 99766543 3378888873 467666643 13357888999999999999999999 999999999999999
Q ss_pred CCCCeEEecccccccCCcccc-----ccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccc
Q 010309 363 EEFGAHLMGVGLSKFVPWEVM-----QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVC 437 (513)
Q Consensus 363 ~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~ 437 (513)
.++.++|+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++|..||.......
T Consensus 161 ~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~ 240 (294)
T PHA02882 161 GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG 240 (294)
T ss_pred CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch
Confidence 999999999999986542211 111122348999999999999999999999999999999999999998763221
Q ss_pred cchhHHhhh-HHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 438 WQSIFEWAT-PLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 438 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
....... .... .+..... .....+..+.+++..|++.+|++||+++++++.|+
T Consensus 241 --~~~~~~~~~~~~-----~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 241 --NLIHAAKCDFIK-----RLHEGKI-------KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred --HHHHHhHHHHHH-----Hhhhhhh-------ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 1110000 0000 0000000 01123467999999999999999999999998764
No 341
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=8.2e-36 Score=294.57 Aligned_cols=239 Identities=23% Similarity=0.391 Sum_probs=189.5
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
+.||+|++|.||+|+.. +++.||+|.+..... .....+.+|+.+++.++|||++++++++.+.+..++||||+. +
T Consensus 27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 105 (313)
T cd06633 27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-G 105 (313)
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-C
Confidence 44799999999999964 588999999875422 233568889999999999999999999999999999999995 5
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++.......
T Consensus 106 ~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~---- 175 (313)
T cd06633 106 SASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPAN---- 175 (313)
T ss_pred CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCCCC----
Confidence 77777753 235689999999999999999999999 99999999999999999999999999986532211
Q ss_pred eeecCcccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 387 TVMAGGTYGYLAPEFVY---RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
...++..|+|||++. ...++.++||||||+++|+|++|..||...+.... ....... ..
T Consensus 176 --~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~------~~~~~~~-~~--------- 237 (313)
T cd06633 176 --SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQN-DS--------- 237 (313)
T ss_pred --CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHHhc-CC---------
Confidence 123788999999984 35678899999999999999999999876543210 0000000 00
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
........+..+.+|+.+||+.+|.+||++.+++.
T Consensus 238 ---~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 238 ---PTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred ---CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111223456899999999999999999999985
No 342
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2e-36 Score=302.05 Aligned_cols=266 Identities=21% Similarity=0.293 Sum_probs=192.8
Q ss_pred hCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC-----Cce
Q 010309 224 KNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH-----GDR 296 (513)
Q Consensus 224 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 296 (513)
++|. ..+.||+|++|.||+|... +|+.||||++.... ......+.+|+.++++++||||+++++++... ...
T Consensus 5 ~~y~-i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 5 PRYQ-NLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred cceE-EEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 3443 3457799999999999864 68999999996432 22345678899999999999999999987654 357
Q ss_pred EEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccc
Q 010309 297 YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK 376 (513)
Q Consensus 297 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~ 376 (513)
++|+||+. ++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.
T Consensus 84 ~lv~e~~~-~~l~~~~~~-----~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 84 YIVQELME-TDLYKLIKT-----QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEEehhcc-cCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccccee
Confidence 99999995 588887753 4699999999999999999999999 99999999999999999999999999997
Q ss_pred cCCccccccc-eeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhc---
Q 010309 377 FVPWEVMQER-TVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQS--- 451 (513)
Q Consensus 377 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--- 451 (513)
.......... .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...+.... ..........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~---~~~~~~~~~~~~~ 231 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQ---LNLILGVLGTPSQ 231 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCCH
Confidence 6543221111 112237889999998754 4688999999999999999999999976432110 0000000000
Q ss_pred cccccccccc----ccCCC--CCCC----cHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 452 HRYLELLDPL----ISSLS--SDIP----EAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 452 ~~~~~~~~~~----~~~~~--~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
.....+.... +.... ...+ ....+.++.+++.+||+.||++|||+.++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000000 00000 0000 01235679999999999999999999999974
No 343
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=333.89 Aligned_cols=254 Identities=28% Similarity=0.455 Sum_probs=201.4
Q ss_pred HhhCcccCCceecccCceEEEEEEe-CCCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEE
Q 010309 222 ITKNFSEGNRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYI 298 (513)
Q Consensus 222 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 298 (513)
++-+..... .||.|.||.||.|.. .+|...|+|-++... ......+.+|..+|..|+|||+|+++|+-.+.+..+|
T Consensus 1233 V~~rWqrg~-~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1233 VTFRWQRGN-FIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred ceeeecccc-ccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 343444444 459999999999995 468999999886543 2334678899999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccC
Q 010309 299 VYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 378 (513)
Q Consensus 299 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~ 378 (513)
.||||++|+|.+.+.. ++..++.....+..|++.|++|||++ |||||||||.||+|+.+|.+|++|||.|...
T Consensus 1312 FMEyC~~GsLa~ll~~----gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEH----GRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred HHHHhccCcHHHHHHh----cchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEe
Confidence 9999999999999964 35577777788899999999999999 9999999999999999999999999999887
Q ss_pred Ccccc--ccceeecCcccccccccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccc
Q 010309 379 PWEVM--QERTVMAGGTYGYLAPEFVYRN---ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHR 453 (513)
Q Consensus 379 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 453 (513)
..... ........||+.|||||++.+. ....+.||||+|||+.||+||+.||...+.. |+-++. +..+.
T Consensus 1385 ~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-~aIMy~-----V~~gh 1458 (1509)
T KOG4645|consen 1385 KNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-WAIMYH-----VAAGH 1458 (1509)
T ss_pred cCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-hHHHhH-----HhccC
Confidence 65421 1111122399999999999764 3567899999999999999999999876642 111111 11111
Q ss_pred ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 454 YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
.+..|. ..+.+-.++|.+||+.||++|.++.|+++.
T Consensus 1459 ------------~Pq~P~-~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1459 ------------KPQIPE-RLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred ------------CCCCch-hhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 122233 378889999999999999999999988863
No 344
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=6.7e-36 Score=294.55 Aligned_cols=244 Identities=24% Similarity=0.390 Sum_probs=192.4
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEeccc---chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRS---SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
+.||+|++|.||+|... ++..||+|.+... ......++.+|+.+++.++|+|++++++++...+..++||||+. |
T Consensus 21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 99 (308)
T cd06634 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-G 99 (308)
T ss_pred HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-C
Confidence 35699999999999964 5789999998643 22234568889999999999999999999999999999999996 6
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. ....+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||++.......
T Consensus 100 ~l~~~~~~---~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~---- 169 (308)
T cd06634 100 SASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN---- 169 (308)
T ss_pred CHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCcc----
Confidence 88777653 234589999999999999999999999 99999999999999999999999999987654321
Q ss_pred eeecCcccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 387 TVMAGGTYGYLAPEFVY---RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
...+++.|+|||.+. ...++.++||||||+++|+|++|..||...+.... ...... ..
T Consensus 170 --~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~~~~~~-~~---------- 230 (308)
T cd06634 170 --XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQ-NE---------- 230 (308)
T ss_pred --cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH------HHHHhh-cC----------
Confidence 123788999999874 35678899999999999999999999865432110 000000 00
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
.........+..+.+||.+||+.+|++||+++++++..--.
T Consensus 231 --~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~ 271 (308)
T cd06634 231 --SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL 271 (308)
T ss_pred --CCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccc
Confidence 01111223556789999999999999999999999764433
No 345
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=9.6e-36 Score=286.80 Aligned_cols=246 Identities=23% Similarity=0.357 Sum_probs=192.8
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEeccc-----chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--CceEEEE
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS-----SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH--GDRYIVY 300 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lv~ 300 (513)
..++||+|++|.||+|... ++..||+|.+... .......+.+|+.++++++||||+++++++.+. +..++|+
T Consensus 6 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~ 85 (264)
T cd06653 6 LGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFV 85 (264)
T ss_pred eeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEE
Confidence 3557899999999999964 5899999988532 123345788999999999999999999998764 4578999
Q ss_pred eeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCc
Q 010309 301 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 380 (513)
Q Consensus 301 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~ 380 (513)
||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++....
T Consensus 86 e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 86 EYMPGGSIKDQLKA----YGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQT 158 (264)
T ss_pred EeCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence 99999999999864 24588999999999999999999999 999999999999999999999999999986543
Q ss_pred cccc-cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccc
Q 010309 381 EVMQ-ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLD 459 (513)
Q Consensus 381 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (513)
.... .......++..|+|||++.+..++.++|+||||+++|+|++|+.||...... .... .....
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~----~~~~~-------- 224 (264)
T cd06653 159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM--AAIF----KIATQ-------- 224 (264)
T ss_pred ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH--HHHH----HHHcC--------
Confidence 2111 1111223788999999998888899999999999999999999999754321 0110 00000
Q ss_pred ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 460 PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+ .....+...++.+.+++.+||+ +|..||++.+++.
T Consensus 225 ~-----~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 225 P-----TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred C-----CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 0 0111223456779999999999 5799999998875
No 346
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=7.3e-36 Score=290.54 Aligned_cols=263 Identities=20% Similarity=0.320 Sum_probs=193.0
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch-hcHHHHHHHHHHHhhcC-CCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLH-HPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|++|.||+|... +++.||||++..... .......+|+..+++++ ||||+++++++.+++..++||||+ ++
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 82 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EG 82 (283)
T ss_pred heeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CC
Confidence 346799999999999975 478999999875432 22334567999999998 999999999999999999999999 88
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++... ....+++..+..++.|++.+|.|||++ +++|+||+|+||+++.++.++|+|||++...........
T Consensus 83 ~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (283)
T cd07830 83 NLYQLMKDR--KGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTD 157 (283)
T ss_pred CHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCC
Confidence 999888642 234689999999999999999999999 999999999999999999999999999986643322111
Q ss_pred eeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccc-hhHHhhhHH-----hhccccccccc
Q 010309 387 TVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQ-SIFEWATPL-----VQSHRYLELLD 459 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~ 459 (513)
..++..|+|||++.. ..++.++|+||||++++||++|++||......... ......... ...........
T Consensus 158 ---~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 158 ---YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred ---CCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 227888999998854 45789999999999999999999999765432110 000000000 00000000000
Q ss_pred ccccCCCCCC---CcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 460 PLISSLSSDI---PEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 460 ~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.......... .....+..+.+++.+||+.||++|||++|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0000000000 00012467999999999999999999999975
No 347
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.2e-35 Score=284.03 Aligned_cols=243 Identities=26% Similarity=0.447 Sum_probs=198.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch--hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|++|.||++... +++.|++|.+..... ...+.+.+|++++++++|||++++++++.+.+..++||||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENG 84 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCC
Confidence 457899999999999865 578999999987643 34578899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+.........
T Consensus 85 ~L~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-- 155 (254)
T cd06627 85 SLRQIIKK----FGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD-- 155 (254)
T ss_pred cHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCccc--
Confidence 99999864 25689999999999999999999999 9999999999999999999999999999876543321
Q ss_pred eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 387 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
.....++..|+|||.+.+..++.++||||||+++|+|++|..||...+.. ..... ... ..
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~--~~~~~----~~~-~~------------- 215 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM--AALFR----IVQ-DD------------- 215 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH--HHHHH----Hhc-cC-------------
Confidence 11223788999999998878899999999999999999999998754321 00000 000 00
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....+...++.+.+++.+||+.+|++|||+.+++.
T Consensus 216 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 216 HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 00111234567999999999999999999999984
No 348
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=4.7e-36 Score=293.96 Aligned_cols=246 Identities=23% Similarity=0.419 Sum_probs=189.0
Q ss_pred CceecccCceEEEEEEeCC-CCEEEEEEecccch-hcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSF-QRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.+.||+|++|.||+|...+ ++.||||.++.... .....+..|+.++.++ .||||+++++++.+....++||||+ ++
T Consensus 20 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~ 98 (296)
T cd06618 20 LGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELM-ST 98 (296)
T ss_pred eeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeecc-Cc
Confidence 4567999999999999865 89999999976432 2345567777777776 4999999999999999999999998 45
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD-KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
+|.+++... ...+++..+..++.|++.||+|||+ . +|+||||+|+||+++.++.+||+|||++..........
T Consensus 99 ~l~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~ 172 (296)
T cd06618 99 CLDKLLKRI---QGPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKT 172 (296)
T ss_pred CHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECccccchhccCCCccc
Confidence 777776542 2468999999999999999999997 5 89999999999999999999999999987654322211
Q ss_pred ceeecCcccccccccccccCC----CCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccc
Q 010309 386 RTVMAGGTYGYLAPEFVYRNE----LTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPL 461 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (513)
...++..|+|||.+.+.. ++.++||||||+++|+|++|+.||...... .+......... .+.
T Consensus 173 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~~------~~~ 238 (296)
T cd06618 173 ---RSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-----FEVLTKILQEE------PPS 238 (296)
T ss_pred ---CCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-----HHHHHHHhcCC------CCC
Confidence 122778899999987553 788999999999999999999998653221 11111111100 000
Q ss_pred ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 462 ISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
. .....++.++.+|+.+||+.||++||+++++++.
T Consensus 239 ~------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 239 L------PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred C------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 0011245679999999999999999999999864
No 349
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.4e-35 Score=291.44 Aligned_cols=268 Identities=21% Similarity=0.244 Sum_probs=192.2
Q ss_pred CcccCCceecccCceEEEEEEeC-CCCEEEEEEecccch--hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCC-------
Q 010309 225 NFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG------- 294 (513)
Q Consensus 225 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------- 294 (513)
+|.. .+.||+|++|.||+|... +|+.||||+++.... .....+.+|+.+++.++||||+++++++.+..
T Consensus 8 ~~~~-~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~ 86 (302)
T cd07864 8 KFDI-IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK 86 (302)
T ss_pred hhhe-eeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence 3433 346799999999999975 588999999975432 23356788999999999999999999987655
Q ss_pred ---ceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEec
Q 010309 295 ---DRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 371 (513)
Q Consensus 295 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 371 (513)
..++|+||+++ +|..++.. ....+++..++.++.|++.||+|||+. +|+|+||||+||++++++.+||+|
T Consensus 87 ~~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 87 DKGAFYLVFEYMDH-DLMGLLES---GLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred cCCcEEEEEcccCc-cHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCc
Confidence 78999999975 77777653 234689999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCccccccceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhh
Q 010309 372 VGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQ 450 (513)
Q Consensus 372 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 450 (513)
||++........... ....++..|+|||.+.+ ..++.++||||||+++|||++|++||....................
T Consensus 160 fg~~~~~~~~~~~~~-~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 238 (302)
T cd07864 160 FGLARLYNSEESRPY-TNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPC 238 (302)
T ss_pred ccccccccCCccccc-ccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 999987654322111 11125778999998865 3568899999999999999999999975443211110000000000
Q ss_pred cccccccc--------cccccCCC-CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 451 SHRYLELL--------DPLISSLS-SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 451 ~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
...+..+. +....... ........+..+.+++.+||+.||++||++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 239 PAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred hhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000000 00000000 00000123567999999999999999999999985
No 350
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.8e-36 Score=300.17 Aligned_cols=264 Identities=21% Similarity=0.262 Sum_probs=191.6
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEeccc--chhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeC--CceEEEEeec
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS--SFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDH--GDRYIVYEFV 303 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~--~~~~lv~e~~ 303 (513)
.+.||+|+||.||+|... +++.||||++... .......+.+|+.+++++ +||||+++++++... ...++||||+
T Consensus 12 ~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~ 91 (337)
T cd07852 12 LQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYM 91 (337)
T ss_pred hHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEeccc
Confidence 346799999999999975 5889999988643 223345677899999999 999999999998654 3579999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
+ ++|.+++.. ..+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||++........
T Consensus 92 ~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~ 162 (337)
T cd07852 92 E-TDLHAVIRA-----NILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE 162 (337)
T ss_pred c-cCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence 6 599988853 2688899999999999999999999 999999999999999999999999999986643321
Q ss_pred c---cceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhH--------Hhhc
Q 010309 384 Q---ERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATP--------LVQS 451 (513)
Q Consensus 384 ~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~--------~~~~ 451 (513)
. .......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||................. ....
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (337)
T cd07852 163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKS 242 (337)
T ss_pred cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHh
Confidence 1 11112237889999998765 4578899999999999999999999976543211100000000 0000
Q ss_pred ccccccccccccCCC--CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 452 HRYLELLDPLISSLS--SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 452 ~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
......++....... ........+.++.++|.+||+.||++|||+.++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 243 PFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000001100000000 000011145679999999999999999999999974
No 351
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=3.8e-36 Score=300.15 Aligned_cols=263 Identities=21% Similarity=0.267 Sum_probs=192.4
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEeccc--chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC-----CceEEEEe
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH-----GDRYIVYE 301 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~~lv~e 301 (513)
.+.||+|+||.||++... +++.||||.+... .......+.+|+.+++.++||||+++++++... ...++|+|
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 89 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYE 89 (337)
T ss_pred EEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEe
Confidence 457799999999999964 6899999998753 223345678899999999999999999987654 34799999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
|+. ++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus 90 ~~~-~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 90 LMD-TDLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred CCC-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 995 689888853 35699999999999999999999999 9999999999999999999999999999866433
Q ss_pred ccccceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHH-hhh-------HHhhcc
Q 010309 382 VMQERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFE-WAT-------PLVQSH 452 (513)
Q Consensus 382 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~-~~~-------~~~~~~ 452 (513)
... .....++..|+|||.+.. ..++.++||||||+++|+|++|++||...+......... ... ......
T Consensus 162 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07858 162 GDF--MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNE 239 (337)
T ss_pred ccc--ccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCch
Confidence 211 112237889999998865 468899999999999999999999997653211110000 000 000000
Q ss_pred cccccccccccCCCC--CCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 453 RYLELLDPLISSLSS--DIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 453 ~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
.....+......... .......++++.++|.+||+.||++|||++++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 240 KARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 000000000000000 00012356779999999999999999999999874
No 352
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=283.76 Aligned_cols=256 Identities=23% Similarity=0.337 Sum_probs=208.1
Q ss_pred cCCceecccCceEEEEEEeC------CCCEEEEEEeccc-chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC-CceEEE
Q 010309 228 EGNRLLGDSKTGGTYSGILP------DGSRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH-GDRYIV 299 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-~~~~lv 299 (513)
...-++-+|.||.||+|.+. +.+.|-+|.++.. +.-....+..|.-.+..+.|||+.++.+++.+. ...+++
T Consensus 287 ~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~ 366 (563)
T KOG1024|consen 287 RLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVL 366 (563)
T ss_pred echhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEE
Confidence 34456799999999999754 3456778888654 333456788999999999999999999998764 567899
Q ss_pred EeeccCCCHHHHhccC----CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccccc
Q 010309 300 YEFVVNGPLDRWLHHI----PRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLS 375 (513)
Q Consensus 300 ~e~~~~gsL~~~l~~~----~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~ 375 (513)
+.++.-|+|..||... +...+.++..+...++.|++.|++|||++ ++||.||.++|.+||+..++||+|=.++
T Consensus 367 y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltDsaLS 443 (563)
T KOG1024|consen 367 YPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTDSALS 443 (563)
T ss_pred EeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEeccchhc
Confidence 9999999999999732 23446688889999999999999999999 9999999999999999999999999999
Q ss_pred ccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccc
Q 010309 376 KFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRY 454 (513)
Q Consensus 376 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (513)
+.+-....+........+..||+||.+....|+.++|||||||+||||+| |+.|+...++.+....... ..
T Consensus 444 RDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkd------Gy-- 515 (563)
T KOG1024|consen 444 RDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKD------GY-- 515 (563)
T ss_pred cccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhc------cc--
Confidence 98766554443333336788999999999999999999999999999999 9999988776543322211 11
Q ss_pred cccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 455 LELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
....+.++++++..++.-||..+|++||++++++.-|.+.
T Consensus 516 ------------RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 516 ------------RLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred ------------eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 1112345778899999999999999999999999988764
No 353
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3.8e-36 Score=299.81 Aligned_cols=262 Identities=20% Similarity=0.312 Sum_probs=192.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEee----CCceEEEEee
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYD----HGDRYIVYEF 302 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~lv~e~ 302 (513)
.+.||+|++|.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 89 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDL 89 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEeh
Confidence 456799999999999964 59999999997542 2334677889999999999999999998763 3467999999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~ 382 (513)
+. ++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~-~~l~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 90 ME-SDLHHIIHS----DQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP 161 (334)
T ss_pred hh-hhHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence 95 689888853 34589999999999999999999999 99999999999999999999999999997654322
Q ss_pred cccc--eeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhH-----Hh---hc
Q 010309 383 MQER--TVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATP-----LV---QS 451 (513)
Q Consensus 383 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~-----~~---~~ 451 (513)
.... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...+............. .. ..
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 241 (334)
T cd07855 162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS 241 (334)
T ss_pred cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence 1111 111237889999998865 4578999999999999999999999976543211110000000 00 00
Q ss_pred ccccccccccccCCCCCCC----cHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 452 HRYLELLDPLISSLSSDIP----EAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....+..+. ... ....+ ....++++.++|.+||+.+|++|||+++++.
T Consensus 242 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 242 DRVRKYIQN-LPR-KQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhHHHHHhh-ccc-CCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 000000000 000 00000 1224678999999999999999999999887
No 354
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-37 Score=296.41 Aligned_cols=244 Identities=22% Similarity=0.367 Sum_probs=201.6
Q ss_pred CceecccCceEEEEEEe-CCCCEEEEEEecccch--hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 230 NRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
.++||+|.||+||-|+. ++|+.||||++.+... +...++++|+.||++++||.||.+.-.|+..+..++|||.+ +|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 45789999999999996 4799999999987533 44578999999999999999999999999999999999999 45
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC---CCeEEecccccccCCcccc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE---FGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~---~~~kl~Dfg~~~~~~~~~~ 383 (513)
+..+.|.. .....+++..-..++.||+.||.|||.+ +|+|+||||+|||+.+. -++||+|||+++.......
T Consensus 648 DMLEMILS--sEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF 722 (888)
T KOG4236|consen 648 DMLEMILS--SEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF 722 (888)
T ss_pred hHHHHHHH--hhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchhhh
Confidence 65555543 3456799999999999999999999999 99999999999999654 4599999999999876554
Q ss_pred ccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 384 QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
... ..||+.|.|||++.+..|...-|+||.|||+|--++|..||....+. .+ .++.. .+
T Consensus 723 Rrs---VVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI-----nd----QIQNA---aF------ 781 (888)
T KOG4236|consen 723 RRS---VVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI-----ND----QIQNA---AF------ 781 (888)
T ss_pred hhh---hcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccch-----hH----Hhhcc---cc------
Confidence 433 33999999999999999999999999999999999999999764331 11 11111 11
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
..+..|..+++++.++||..+|+..-.+|-|.+.-+.
T Consensus 782 -MyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 782 -MYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred -ccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 1244566788899999999999999999999887653
No 355
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.4e-35 Score=289.35 Aligned_cols=252 Identities=21% Similarity=0.230 Sum_probs=196.1
Q ss_pred CceecccCceEEEEEEe----CCCCEEEEEEecccch----hcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEE
Q 010309 230 NRLLGDSKTGGTYSGIL----PDGSRVAVKRLKRSSF----QRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVY 300 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~ 300 (513)
.+.||+|++|.||++.. .+++.||||++++... ...+.+.+|+.++.++ +||||+++++.+......++||
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 84 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLIL 84 (288)
T ss_pred EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEE
Confidence 45689999999999984 3578999999975422 2335678999999999 6999999999999999999999
Q ss_pred eeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCc
Q 010309 301 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 380 (513)
Q Consensus 301 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~ 380 (513)
||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 85 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 85 DYVNGGELFTHLYQ----REHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred ecCCCCcHHHHHhh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence 99999999998853 24688999999999999999999999 999999999999999999999999999876543
Q ss_pred cccccceeecCcccccccccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccc
Q 010309 381 EVMQERTVMAGGTYGYLAPEFVYRNE--LTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELL 458 (513)
Q Consensus 381 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (513)
..... .....++..|+|||.+.+.. .+.++||||||+++|||++|..||....... ...+.......
T Consensus 158 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~-------- 226 (288)
T cd05583 158 EEEER-AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--SQSEISRRILK-------- 226 (288)
T ss_pred ccccc-cccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--hHHHHHHHHHc--------
Confidence 32211 11223788999999987654 7889999999999999999999986432211 00111111000
Q ss_pred cccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 459 DPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
. ....+...+..+.+++.+||+.||++|||+.++.+.|+..
T Consensus 227 -~------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 227 -S------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred -c------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 0 0001122445789999999999999999998888777643
No 356
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.2e-35 Score=288.33 Aligned_cols=247 Identities=20% Similarity=0.255 Sum_probs=192.1
Q ss_pred CceecccCceEEEEEEe----CCCCEEEEEEecccch----hcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEE
Q 010309 230 NRLLGDSKTGGTYSGIL----PDGSRVAVKRLKRSSF----QRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVY 300 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~ 300 (513)
.+.||+|+||.||++.. .+|..||+|++..... ...+.+.+|+.++.++ +|+||+++++.+..+...++||
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLIL 84 (290)
T ss_pred eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEE
Confidence 45679999999999986 3689999999975422 2346678899999999 6999999999999999999999
Q ss_pred eeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCc
Q 010309 301 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 380 (513)
Q Consensus 301 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~ 380 (513)
||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++||||+|+|||++.++.+||+|||++.....
T Consensus 85 e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 85 DYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence 99999999999864 34688999999999999999999999 999999999999999999999999999986543
Q ss_pred cccccceeecCcccccccccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccc
Q 010309 381 EVMQERTVMAGGTYGYLAPEFVYRN--ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELL 458 (513)
Q Consensus 381 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (513)
..... .....++..|+|||.+... .++.++||||||+++|+|++|..||....... ............
T Consensus 158 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~--~~~~~~~~~~~~------- 227 (290)
T cd05613 158 DEVER-AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN--SQAEISRRILKS------- 227 (290)
T ss_pred ccccc-cccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc--cHHHHHHHhhcc-------
Confidence 32211 1122378899999998753 46789999999999999999999986432210 111111110000
Q ss_pred cccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHH
Q 010309 459 DPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRP-----RMSHVVH 501 (513)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 501 (513)
....+...++.+.+++.+||+.||++|| ++++++.
T Consensus 228 --------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 228 --------EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred --------CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 0001122456789999999999999997 6777765
No 357
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.5e-35 Score=296.60 Aligned_cols=272 Identities=19% Similarity=0.300 Sum_probs=197.7
Q ss_pred cCHHHHHHHhhCcccCCceecccCceEEEEEEe-CCCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEE
Q 010309 214 FTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCC 290 (513)
Q Consensus 214 ~~~~~l~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~ 290 (513)
....++..+.++|... +.||+|+||.||++.. .+++.||+|++.... ....+.+.+|+.++.+++||||+++++++
T Consensus 7 ~~~~~~~~~~~~y~~~-~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~ 85 (345)
T cd07877 7 ELNKTIWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF 85 (345)
T ss_pred hHHHHHhhccCceEEE-EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeee
Confidence 3455667777777654 5679999999999985 468999999997542 22346688899999999999999999988
Q ss_pred eeC------CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC
Q 010309 291 YDH------GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE 364 (513)
Q Consensus 291 ~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~ 364 (513)
... ...+++++++ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 86 ~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~ 156 (345)
T cd07877 86 TPARSLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNED 156 (345)
T ss_pred eecccccccccEEEEehhc-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCC
Confidence 643 3468888887 7899888753 3589999999999999999999999 99999999999999999
Q ss_pred CCeEEecccccccCCccccccceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccch-hH
Q 010309 365 FGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQS-IF 442 (513)
Q Consensus 365 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~-~~ 442 (513)
+.+||+|||++....... ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...+...... ..
T Consensus 157 ~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~ 231 (345)
T cd07877 157 CELKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 231 (345)
T ss_pred CCEEEecccccccccccc-----cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 999999999987653221 11237889999998866 467889999999999999999999996544321100 00
Q ss_pred Hhh-------hHHhhccc---ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 443 EWA-------TPLVQSHR---YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 443 ~~~-------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
... ........ ....+...... .........++++.++|.+||+.||.+||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 232 RLVGTPGAELLKKISSESARNYIQSLTQMPKM-NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred HHhCCCCHHHHhhcccHhHHHHHHHhcccCCc-chhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 000 00000000 00000000000 000000123557899999999999999999999886
No 358
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.3e-35 Score=296.85 Aligned_cols=266 Identities=17% Similarity=0.274 Sum_probs=191.4
Q ss_pred hCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCC------
Q 010309 224 KNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG------ 294 (513)
Q Consensus 224 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 294 (513)
.+|.. ...||+|++|.||+|... +|+.||||++.... ......+.+|+.+++.++||||+++++++....
T Consensus 15 ~~y~~-~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 15 ERYTS-LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred cceEE-EEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 45543 467799999999999964 68999999987542 222456889999999999999999999987543
Q ss_pred ceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccc
Q 010309 295 DRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGL 374 (513)
Q Consensus 295 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 374 (513)
..++|+||+. .+|..++. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 94 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred eEEEEecccc-cCHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 4599999995 47776652 3589999999999999999999999 999999999999999999999999999
Q ss_pred cccCCccccccceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhh-------
Q 010309 375 SKFVPWEVMQERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWAT------- 446 (513)
Q Consensus 375 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~------- 446 (513)
+........ ...++..|+|||.+.+ ..++.++||||||+++|||++|+.||...+............
T Consensus 164 ~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (342)
T cd07879 164 ARHADAEMT-----GYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEF 238 (342)
T ss_pred CcCCCCCCC-----CceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 876532211 1226788999999876 468899999999999999999999998654211000000000
Q ss_pred -HHhhcccccccccccccCCCCCCC---cHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--HhcC
Q 010309 447 -PLVQSHRYLELLDPLISSLSSDIP---EAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ--LQQL 506 (513)
Q Consensus 447 -~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~ 506 (513)
.............. ......... ....+..+.+||.+||+.||++||++++++.. ++..
T Consensus 239 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 239 VQKLEDKAAKSYIKS-LPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred HHHhcccchHHHHhh-cCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 00000000000000 000000000 01234568899999999999999999999853 5444
No 359
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=7.4e-36 Score=297.27 Aligned_cols=273 Identities=21% Similarity=0.266 Sum_probs=201.3
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCC-----ceEEEE
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG-----DRYIVY 300 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~lv~ 300 (513)
..+.||.|++|.||+|... +++.||||.+.... ....+.+.+|+.+++.++||||+++++++...+ ..|+||
T Consensus 4 i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~ 83 (330)
T cd07834 4 LLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVT 83 (330)
T ss_pred eeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEe
Confidence 3457899999999999975 48999999997653 334567899999999999999999999988775 789999
Q ss_pred eeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCc
Q 010309 301 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 380 (513)
Q Consensus 301 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~ 380 (513)
||++ ++|.+++.. ...+++..++.++.|++.||+|||+. +|+|+||||+|||++.++.++|+|||++.....
T Consensus 84 e~~~-~~l~~~l~~----~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 84 ELME-TDLHKVIKS----PQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred cchh-hhHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 9996 589888853 24799999999999999999999999 999999999999999999999999999987654
Q ss_pred cccc-cceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHH--------hh
Q 010309 381 EVMQ-ERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPL--------VQ 450 (513)
Q Consensus 381 ~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~--------~~ 450 (513)
.... .......++..|+|||.+.+. .++.++||||||+++|+|++|.+||...+.............. ..
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 235 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFIT 235 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcc
Confidence 3210 011112278889999999887 7899999999999999999999999776532111100000000 00
Q ss_pred cccccccccccccC--CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--HhcCcCC
Q 010309 451 SHRYLELLDPLISS--LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ--LQQLAQP 509 (513)
Q Consensus 451 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~~~ 509 (513)
.....+.+...... ..........+..+.+++.+||+.+|.+||++++++.. ++++..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 236 SEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred ccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 00000000000000 00000011245679999999999999999999999983 5554443
No 360
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.2e-35 Score=288.20 Aligned_cols=244 Identities=20% Similarity=0.329 Sum_probs=196.9
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcC-CCcEeeeeeEEeeCCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLH-HPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
.+.||+|++|.||++... +++.||+|++.... ....+.+.+|+.++.+++ ||||+++++++...+..++|||+++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAP 85 (280)
T ss_pred eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCC
Confidence 456799999999999975 69999999997632 233467889999999998 9999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
+++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.........
T Consensus 86 ~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 86 NGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 9999999964 24699999999999999999999999 9999999999999999999999999999876543221
Q ss_pred ------------------cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhh
Q 010309 385 ------------------ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWAT 446 (513)
Q Consensus 385 ------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~ 446 (513)
.......++..|+|||.+....++.++||||||++++++++|..||...... ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~--- 232 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY---LTFQ--- 232 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH---HHHH---
Confidence 1111223678999999998888999999999999999999999999865421 0000
Q ss_pred HHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCH----HHHHH
Q 010309 447 PLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRM----SHVVH 501 (513)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~ 501 (513)
.... . ....+...++.+.+++.+||+.+|++||++ +++++
T Consensus 233 ~~~~---------~------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 233 KILK---------L------EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHh---------c------CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 0000 0 001112335679999999999999999999 77664
No 361
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=8.2e-36 Score=298.25 Aligned_cols=269 Identities=21% Similarity=0.294 Sum_probs=192.5
Q ss_pred CCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--------------
Q 010309 229 GNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH-------------- 293 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-------------- 293 (513)
..+.||.|+||.||+|... +|+.||+|.+........+.+.+|+.++++++||||+++++++...
T Consensus 9 ~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~ 88 (342)
T cd07854 9 DLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTEL 88 (342)
T ss_pred EEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccccccc
Confidence 3456799999999999974 5899999999776555667889999999999999999999876554
Q ss_pred CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecC-CCCeEEecc
Q 010309 294 GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE-EFGAHLMGV 372 (513)
Q Consensus 294 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~Df 372 (513)
...++||||++ ++|.+++.. ..+++..++.++.||+.||.|||+. +++||||||+||+++. ++.++|+||
T Consensus 89 ~~~~lv~e~~~-~~L~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 89 NSVYIVQEYME-TDLANVLEQ-----GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred ceEEEEeeccc-ccHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEECCc
Confidence 35789999996 589888753 3589999999999999999999999 9999999999999974 556899999
Q ss_pred cccccCCcccccc-ceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhh
Q 010309 373 GLSKFVPWEVMQE-RTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQ 450 (513)
Q Consensus 373 g~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 450 (513)
|.+.......... ......++..|+|||.+.. ..++.++|||||||++|+|++|+.||................+...
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07854 160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR 239 (342)
T ss_pred ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 9997653321111 1111236888999998754 4578899999999999999999999976543211110000000000
Q ss_pred c---cccccccccccc--CCCCCCC----cHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH--HHhcC
Q 010309 451 S---HRYLELLDPLIS--SLSSDIP----EAGVVQKVVDLVYACTQHVPSMRPRMSHVVH--QLQQL 506 (513)
Q Consensus 451 ~---~~~~~~~~~~~~--~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~ 506 (513)
. ............ ......+ ....+.++.+|+.+||+.||.+|||+++++. .++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence 0 000000000000 0000000 0124567899999999999999999999984 44433
No 362
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=315.27 Aligned_cols=255 Identities=27% Similarity=0.424 Sum_probs=204.3
Q ss_pred CceecccCceEEEEEEeC----C----CCEEEEEEecccc-hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEE
Q 010309 230 NRLLGDSKTGGTYSGILP----D----GSRVAVKRLKRSS-FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIV 299 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~----~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv 299 (513)
.+.||+|.||.|++|... . ...||||.++... ..+.+.+..|+++|..+ .||||+.++|+|...+..++|
T Consensus 301 ~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v 380 (609)
T KOG0200|consen 301 GKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVI 380 (609)
T ss_pred cceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEE
Confidence 447899999999999843 1 4579999998653 34567899999999999 799999999999999999999
Q ss_pred EeeccCCCHHHHhccCC---CC-------C--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCe
Q 010309 300 YEFVVNGPLDRWLHHIP---RG-------G--RSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 367 (513)
Q Consensus 300 ~e~~~~gsL~~~l~~~~---~~-------~--~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~ 367 (513)
+||+..|+|.++|+..+ .. . ..++..+.+.++.|||.|++||++. ++|||||.++|||++.+..+
T Consensus 381 ~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~~~~~~ 457 (609)
T KOG0200|consen 381 VEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLITKNKVI 457 (609)
T ss_pred EEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEecCCCEE
Confidence 99999999999998654 00 0 2388999999999999999999999 99999999999999999999
Q ss_pred EEecccccccCCccccccceeec-CcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhh
Q 010309 368 HLMGVGLSKFVPWEVMQERTVMA-GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWA 445 (513)
Q Consensus 368 kl~Dfg~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 445 (513)
||+|||+++.............. .-...|||||.+....++.+||||||||+||||+| |..||.+.... ..+.+
T Consensus 458 kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~--~~l~~-- 533 (609)
T KOG0200|consen 458 KIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT--EELLE-- 533 (609)
T ss_pred EEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH--HHHHH--
Confidence 99999999965544333211111 02456999999999999999999999999999999 88998763311 11111
Q ss_pred hHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 446 TPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
....+. ....+..+.+++.++|+.||+.+|++||++.++.+.|+.+
T Consensus 534 --~l~~G~-------------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 534 --FLKEGN-------------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred --HHhcCC-------------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 111111 1122344577899999999999999999999999999874
No 363
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.9e-35 Score=293.75 Aligned_cols=265 Identities=22% Similarity=0.323 Sum_probs=194.7
Q ss_pred HHhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEee-CCce
Q 010309 221 SITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYD-HGDR 296 (513)
Q Consensus 221 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~ 296 (513)
.++++|.. .+.||.|+||.||++... +++.||||++.+.. ....+.+.+|+.+++.++||||+++++++.. ....
T Consensus 7 ~~~~~y~~-~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 7 EITNRYVD-LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred ccccceEE-EEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 34555544 467799999999999865 68999999886532 2234678899999999999999999999876 5678
Q ss_pred EEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccc
Q 010309 297 YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK 376 (513)
Q Consensus 297 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~ 376 (513)
++|+||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+.
T Consensus 86 ~lv~e~~-~~~L~~~~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 86 YFVTELL-GTDLHRLLTS-----RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEEeehh-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 9999998 6689888853 4578888999999999999999999 99999999999999999999999999987
Q ss_pred cCCccccccceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccch-hHHhhh-------H
Q 010309 377 FVPWEVMQERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQS-IFEWAT-------P 447 (513)
Q Consensus 377 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~-~~~~~~-------~ 447 (513)
....... ...++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.......... +.+... .
T Consensus 157 ~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd07856 157 IQDPQMT-----GYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVIN 231 (328)
T ss_pred ccCCCcC-----CCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 5432211 1226788999998766 568999999999999999999999997654311000 000000 0
Q ss_pred HhhcccccccccccccCCCCCCCc----HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 448 LVQSHRYLELLDPLISSLSSDIPE----AGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
........+.+..... ....+. ...++.+.++|.+||+.+|++|||+++++..
T Consensus 232 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 232 TICSENTLRFVQSLPK--REPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hccchhhHHHHhhccc--cCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000000000 000010 1235679999999999999999999999864
No 364
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.4e-35 Score=284.89 Aligned_cols=246 Identities=19% Similarity=0.291 Sum_probs=192.4
Q ss_pred CceecccCceEEEEEEeCC-CCEEEEEEecccc-----hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 230 NRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSS-----FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
.+.||+|+||.||++.... +..+++|+++... ......+..|+.+++.++||||+++++++.+....++||||+
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (260)
T cd08222 5 QQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYC 84 (260)
T ss_pred eeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeC
Confidence 4568999999999998643 4556666665321 123345778999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
++++|.+++.........+++..++.++.|++.||.|||+. +++|+||+|+||+++. +.++|+|||++........
T Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~ 160 (260)
T cd08222 85 EGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCD 160 (260)
T ss_pred CCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecCCCcc
Confidence 99999998865444456799999999999999999999999 9999999999999986 4699999999876543221
Q ss_pred ccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccccccc
Q 010309 384 QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 384 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
. .....+++.|+|||.+.+..++.++|+||||+++|+|++|..||...... ........ ..
T Consensus 161 ~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~------~~~~~~~~---------~~-- 221 (260)
T cd08222 161 L--ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL------SVVLRIVE---------GP-- 221 (260)
T ss_pred c--ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHc---------CC--
Confidence 1 11223788999999998888899999999999999999999998643321 11111000 00
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....+...+.++.++|.+||+.||++||++.++++
T Consensus 222 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 222 ---TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ---CCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 00112345678999999999999999999999985
No 365
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.4e-35 Score=286.58 Aligned_cols=261 Identities=21% Similarity=0.305 Sum_probs=195.7
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
+.||+|++|.||+|+.. +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||++ ++
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~ 83 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MD 83 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cC
Confidence 46799999999999975 49999999998653 2334677889999999999999999999999999999999997 59
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++.... ..+++..+..++.|++.||+|||+. +|+|+||+|+||+++.++.++|+|||.+..........
T Consensus 84 l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~-- 155 (282)
T cd07829 84 LKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTY-- 155 (282)
T ss_pred HHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcccc--
Confidence 999997521 4699999999999999999999999 99999999999999999999999999998764432211
Q ss_pred eecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccc-hhHHhh-------hHHhhccc-cccc
Q 010309 388 VMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQ-SIFEWA-------TPLVQSHR-YLEL 457 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~-~~~~~~-------~~~~~~~~-~~~~ 457 (513)
....++..|+|||.+.+. .++.++||||||+++|||++|.+||......... .+.... ........ ....
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (282)
T cd07829 156 THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPT 235 (282)
T ss_pred CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccc
Confidence 111256789999998776 7899999999999999999999999765432110 000000 00000000 0000
Q ss_pred ccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 458 LDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
........ ........+..+.+++.+||+.||++||++++++.
T Consensus 236 ~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 236 FPKFPPKD-LEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccCccc-hHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00000000 00001123567999999999999999999999985
No 366
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.3e-35 Score=281.46 Aligned_cols=236 Identities=25% Similarity=0.323 Sum_probs=192.1
Q ss_pred ecccCceEEEEEEeC-CCCEEEEEEecccchh---cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 233 LGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ---RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 233 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
||.|++|.||++... +++.+|+|++...... ....+..|+.++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 599999999999975 4899999999765332 345788999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+........ ...
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~~ 151 (250)
T cd05123 81 FSHLSK----EGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS--RTN 151 (250)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCC--ccc
Confidence 999964 23689999999999999999999998 999999999999999999999999999987644321 112
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
...++..|+|||...+...+.++|+||||+++|+|++|..||...+.. .... .... . ..
T Consensus 152 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~---~~~~---~~~~---------~------~~ 210 (250)
T cd05123 152 TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK---EIYE---KILK---------D------PL 210 (250)
T ss_pred CCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHHH---HHhc---------C------CC
Confidence 223788999999998888899999999999999999999999755431 1111 0000 0 00
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSH 498 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 498 (513)
..+...+..+.+++.+||..||++||++.+
T Consensus 211 ~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 211 RFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 111122567899999999999999999944
No 367
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=278.73 Aligned_cols=262 Identities=23% Similarity=0.413 Sum_probs=202.3
Q ss_pred cccCHHHHHHHhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccch-hcHHHHHHHHHHHhhc-CCCcEeeeee
Q 010309 212 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF-QRKKEFYSEIGRFARL-HHPNLVAVKG 288 (513)
Q Consensus 212 ~~~~~~~l~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~ 288 (513)
..|+.+.|+.+. .||.|+||+|++-.++ .|+..|||+++.... .+.++++.|.+...+- +.||||++||
T Consensus 59 ~~F~~~~Lqdlg--------~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyG 130 (361)
T KOG1006|consen 59 HTFTSDNLQDLG--------EIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYG 130 (361)
T ss_pred cccccchHHHHH--------HhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhh
Confidence 345555555432 4699999999998864 699999999987644 5567888898876655 7899999999
Q ss_pred EEeeCCceEEEEeeccCCCHHHHhccC-CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCe
Q 010309 289 CCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 367 (513)
Q Consensus 289 ~~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~ 367 (513)
.+..++..+|.||+| ..||+.+.... ......+++..+-+|..-.+.||.||-... .|||||+||+|||++..|.+
T Consensus 131 a~F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~v 207 (361)
T KOG1006|consen 131 ALFSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDV 207 (361)
T ss_pred hhhcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCE
Confidence 999999999999999 55776554211 123456899999999999999999998764 89999999999999999999
Q ss_pred EEecccccccCCccccccceeecCccccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhh
Q 010309 368 HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR--NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWA 445 (513)
Q Consensus 368 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~ 445 (513)
||+|||++-.+..+.... ...|...|||||.+.. ..|+.+|||||||++|||+.||..||...+ ++++..
T Consensus 208 KLCDFGIcGqLv~SiAkT---~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-----svfeql 279 (361)
T KOG1006|consen 208 KLCDFGICGQLVDSIAKT---VDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-----SVFEQL 279 (361)
T ss_pred eeecccchHhHHHHHHhh---hccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-----HHHHHH
Confidence 999999998765443222 2238889999999864 358899999999999999999999998654 344444
Q ss_pred hHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 446 TPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
........ |.+ .........+..+.++|..||.+|-++||+..++++
T Consensus 280 ~~Vv~gdp------p~l---~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 280 CQVVIGDP------PIL---LFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred HHHHcCCC------Cee---cCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 43333211 111 111222346778999999999999999999999875
No 368
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.4e-35 Score=294.94 Aligned_cols=265 Identities=18% Similarity=0.288 Sum_probs=193.3
Q ss_pred HHhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCC---
Q 010309 221 SITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG--- 294 (513)
Q Consensus 221 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--- 294 (513)
++.++|.. .+.||+|++|.||++... ++..||||++.... ......+.+|+.+++.++||||+++++++....
T Consensus 12 ~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 12 EVPDRYRD-LKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred ccccceEE-EEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 34445544 456799999999999854 68999999986532 223456889999999999999999999987654
Q ss_pred ---ceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEec
Q 010309 295 ---DRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 371 (513)
Q Consensus 295 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 371 (513)
..++||||+ +++|.+++.. ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++|+|
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~d 161 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKH-----EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILD 161 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 358999999 7799888753 4689999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCccccccceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCcccc-chhHHhh----
Q 010309 372 VGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCW-QSIFEWA---- 445 (513)
Q Consensus 372 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~-~~~~~~~---- 445 (513)
||++........ ...+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.... .......
T Consensus 162 fg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 236 (343)
T cd07880 162 FGLARQTDSEMT-----GYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPS 236 (343)
T ss_pred cccccccccCcc-----ccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 999986543211 1237889999999876 4578999999999999999999999976543210 0000000
Q ss_pred ---hHHhhcccccccccccccCCCCC---CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 446 ---TPLVQSHRYLELLDPLISSLSSD---IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 446 ---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
............... +...... ......+..+.++|.+||+.||++|||+.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 237 KEFVQKLQSEDAKNYVKK-LPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHHHhhcchhHHHHHHh-ccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000000000 0000000 001123456899999999999999999999983
No 369
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.4e-35 Score=312.55 Aligned_cols=254 Identities=24% Similarity=0.324 Sum_probs=185.2
Q ss_pred HHhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccc-hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC-----
Q 010309 221 SITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS-FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH----- 293 (513)
Q Consensus 221 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----- 293 (513)
+...+|.+. ++||+||||.||+++.+ ||+.||||++.... ......+.+|+..|++|+|||||+++..+.+.
T Consensus 476 RY~~DFEEL-~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 476 RYLNDFEEL-ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hHhhhhHHH-HHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 455566554 47799999999999965 89999999997653 23346788999999999999999986543110
Q ss_pred --------------------------------------------------------------------------------
Q 010309 294 -------------------------------------------------------------------------------- 293 (513)
Q Consensus 294 -------------------------------------------------------------------------------- 293 (513)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ----------------------------------CceEEEEeeccCCCHHHHhccCCCCCCCC-CHHHHHHHHHHHHHHH
Q 010309 294 ----------------------------------GDRYIVYEFVVNGPLDRWLHHIPRGGRSL-DWAMRMKVATTLAQGI 338 (513)
Q Consensus 294 ----------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l-~~~~~~~i~~qi~~~L 338 (513)
..+||-||||+..+|.+++.... .. .....++++++|+.||
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~----~~~~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH----FNSQRDEAWRLFREILEGL 710 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc----cchhhHHHHHHHHHHHHHH
Confidence 01267889998888888876421 11 4567889999999999
Q ss_pred HHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCC----c------------cccccceeecCccccccccccc
Q 010309 339 AFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVP----W------------EVMQERTVMAGGTYGYLAPEFV 402 (513)
Q Consensus 339 ~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~----~------------~~~~~~~~~~~gt~~y~aPE~~ 402 (513)
+|+|++ |||||||||.|||+|++..|||+|||++.... . .......+...||.-|+|||++
T Consensus 711 aYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999999 99999999999999999999999999998721 0 0111122233499999999999
Q ss_pred ccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHH
Q 010309 403 YRN---ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVV 479 (513)
Q Consensus 403 ~~~---~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 479 (513)
.+. .|+.|+|+||||||++||+. ||...- +.+..+. ++-+..+... .+ ...+..+.-.
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM--------ERa~iL~------~LR~g~iP~~-~~-f~~~~~~~e~ 848 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSM--------ERASILT------NLRKGSIPEP-AD-FFDPEHPEEA 848 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCchH--------HHHHHHH------hcccCCCCCC-cc-cccccchHHH
Confidence 764 49999999999999999996 565421 1111111 1111111110 01 1122334567
Q ss_pred HHHHHhcCCCCCCCCCHHHHHH
Q 010309 480 DLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 480 ~li~~cl~~dP~~RPs~~evl~ 501 (513)
.+|.+|++.||++||||.|+|.
T Consensus 849 slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 849 SLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHHHhcCCCccCCCHHHHhh
Confidence 8999999999999999999985
No 370
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=6.2e-35 Score=287.94 Aligned_cols=269 Identities=19% Similarity=0.223 Sum_probs=190.0
Q ss_pred CcccCCceecccCceEEEEEEeC-CCCEEEEEEecccchh--cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCC-------
Q 010309 225 NFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ--RKKEFYSEIGRFARLHHPNLVAVKGCCYDHG------- 294 (513)
Q Consensus 225 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------- 294 (513)
+|.. .+.||+|++|.||+|... +++.||||++...... ....+.+|+++++.++||||+++++++.+..
T Consensus 9 ~y~~-~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 87 (311)
T cd07866 9 DYEI-LGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKR 87 (311)
T ss_pred cEEE-EEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccC
Confidence 4443 446799999999999965 5899999998654322 2346788999999999999999999876543
Q ss_pred -ceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccc
Q 010309 295 -DRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVG 373 (513)
Q Consensus 295 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 373 (513)
..++|+||+.+ +|...+.. ....+++..+..++.|+++||+|||+. +++|+||||+||++++++.++|+|||
T Consensus 88 ~~~~lv~~~~~~-~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 88 GSVYMVTPYMDH-DLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred ceEEEEEecCCc-CHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCc
Confidence 35999999954 67776653 235699999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCccccccc---------eeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHH
Q 010309 374 LSKFVPWEVMQER---------TVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFE 443 (513)
Q Consensus 374 ~~~~~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~ 443 (513)
++........... .....+++.|+|||.+.+. .++.++||||||+++|||++|++||.+.+.........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9986543221111 0111267889999987654 57899999999999999999999997655432111100
Q ss_pred hhhHH-----hh-ccccccccc-ccccCCCCCC--CcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 444 WATPL-----VQ-SHRYLELLD-PLISSLSSDI--PEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 444 ~~~~~-----~~-~~~~~~~~~-~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
..... .. ........+ .......... ......+.+.+++.+||+.||.+|||+.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 00000 00 000000000 0000000000 00112357899999999999999999999874
No 371
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=8.1e-35 Score=289.98 Aligned_cols=263 Identities=18% Similarity=0.224 Sum_probs=188.2
Q ss_pred CceecccCceEEEEEEeC-C--CCEEEEEEecccc--hhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeC----CceEEE
Q 010309 230 NRLLGDSKTGGTYSGILP-D--GSRVAVKRLKRSS--FQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDH----GDRYIV 299 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~----~~~~lv 299 (513)
.+.||+|+||.||++... . +..||+|.+.... ....+.+.+|+.+++++ +||||+++++..... ...+++
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 84 (332)
T cd07857 5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLY 84 (332)
T ss_pred EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEE
Confidence 456899999999999964 3 7799999987532 22346778899999999 599999999875432 456889
Q ss_pred EeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCC
Q 010309 300 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVP 379 (513)
Q Consensus 300 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~ 379 (513)
+|++. ++|.+++.. ...+++..++.++.||+.||.|||+. +++||||||+|||++.++.+||+|||++....
T Consensus 85 ~e~~~-~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 85 EELME-ADLHQIIRS----GQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred Eeccc-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 99985 689888853 35689999999999999999999999 99999999999999999999999999998654
Q ss_pred cccccc--ceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccch-hHHhhh-------HH
Q 010309 380 WEVMQE--RTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQS-IFEWAT-------PL 448 (513)
Q Consensus 380 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~-~~~~~~-------~~ 448 (513)
...... ......|+..|+|||++.+ ..++.++||||||+++|+|++|.+||...+...... ...... ..
T Consensus 157 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T cd07857 157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSR 236 (332)
T ss_pred cccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 322111 1112237889999998765 468899999999999999999999997654321100 000000 00
Q ss_pred hhcccccccccccccCCCCC---CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 449 VQSHRYLELLDPLISSLSSD---IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
............ ....... ......+..+.+++.+||+.||++|||+.+++.
T Consensus 237 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 237 IGSPKAQNYIRS-LPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hhhhhHHHHHHh-ccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000000 0000000 000112457999999999999999999999875
No 372
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-36 Score=274.96 Aligned_cols=235 Identities=23% Similarity=0.279 Sum_probs=196.3
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchhcHH---HHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKK---EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
-++||+|.||.|.+.+-+ .++.+|+|++++.....++ .-..|-++|+..+||.+..+-..|...+.+++||||+.|
T Consensus 173 LKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanG 252 (516)
T KOG0690|consen 173 LKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANG 252 (516)
T ss_pred HHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccC
Confidence 467899999999999854 6999999999987544433 346788999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|.|.-+|.+ .+.+++...+.+...|++||.|||++ +||.||||.+|.|+|.+|++||+|||+++.--.. ..
T Consensus 253 GeLf~HLsr----er~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~--g~ 323 (516)
T KOG0690|consen 253 GELFFHLSR----ERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY--GD 323 (516)
T ss_pred ceEeeehhh----hhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcccc--cc
Confidence 999888854 46799999999999999999999999 9999999999999999999999999999854322 23
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
.....+|||.|.|||++....|..+.|-|.+||++|||++|+.||...+.. .+++... ..
T Consensus 324 t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~---kLFeLIl--~e--------------- 383 (516)
T KOG0690|consen 324 TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE---KLFELIL--ME--------------- 383 (516)
T ss_pred eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh---HHHHHHH--hh---------------
Confidence 344567999999999999999999999999999999999999999876643 2222111 00
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCC
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRP 494 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP 494 (513)
....+...+++...|+..+|..||.+|.
T Consensus 384 -d~kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 384 -DLKFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred -hccCCccCCHHHHHHHHHHhhcChHhhc
Confidence 1122345667899999999999999994
No 373
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=7.3e-36 Score=272.30 Aligned_cols=202 Identities=19% Similarity=0.316 Sum_probs=165.5
Q ss_pred cCCceecccCceEEEEEEeCC-----CCEEEEEEecccch--hcHHHHHHHHHHHhhcCCCcEeeeeeEEee-CCceEEE
Q 010309 228 EGNRLLGDSKTGGTYSGILPD-----GSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYD-HGDRYIV 299 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~lv 299 (513)
+..+.||+|.||.||+|+..+ ...+|||.++.... .-.....+|+.+++.++||||+.+..++.+ +...+++
T Consensus 27 e~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~ 106 (438)
T KOG0666|consen 27 EGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLL 106 (438)
T ss_pred hccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEE
Confidence 445567999999999997432 33799999976522 123557799999999999999999999988 7788999
Q ss_pred EeeccCCCHHHHhccCC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC----CCeEEecccc
Q 010309 300 YEFVVNGPLDRWLHHIP-RGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE----FGAHLMGVGL 374 (513)
Q Consensus 300 ~e~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~----~~~kl~Dfg~ 374 (513)
+||.+. +|...|+..+ ...+.++...+..|+.||+.|+.|||++ =|+||||||.|||+..+ |.|||+|||+
T Consensus 107 fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaDlGl 182 (438)
T KOG0666|consen 107 FDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIADLGL 182 (438)
T ss_pred ehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeecccH
Confidence 999966 8888886433 2346799999999999999999999999 89999999999999877 8999999999
Q ss_pred cccCCcccccc-ceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCC
Q 010309 375 SKFVPWEVMQE-RTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAV 433 (513)
Q Consensus 375 ~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~ 433 (513)
++.+......- ......-|..|.|||++.+. .||++.||||.|||+.||+|-.+.|.+.
T Consensus 183 aR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 183 ARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred HHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 99876543221 11122268999999999885 5899999999999999999999888764
No 374
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=8.4e-35 Score=275.59 Aligned_cols=220 Identities=19% Similarity=0.171 Sum_probs=176.7
Q ss_pred cCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHHHhcc
Q 010309 236 SKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHH 314 (513)
Q Consensus 236 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 314 (513)
|.+|.||++... +++.||+|++.... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 889999999974 68899999997653 233455555566799999999999999999999999999999999864
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeecCccc
Q 010309 315 IPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY 394 (513)
Q Consensus 315 ~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~ 394 (513)
...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+........ ...++.
T Consensus 79 ----~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~-----~~~~~~ 146 (237)
T cd05576 79 ----FLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCD-----GEAVEN 146 (237)
T ss_pred ----hcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccccc-----cCCcCc
Confidence 23589999999999999999999999 999999999999999999999999998866543211 122567
Q ss_pred ccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHH
Q 010309 395 GYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGV 474 (513)
Q Consensus 395 ~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (513)
.|+|||.+.+..++.++||||+|+++|||++|..|+...... .. .... .. .+...
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------------~~-----~~~~-------~~-~~~~~ 201 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG------------IN-----THTT-------LN-IPEWV 201 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------------cc-----cccc-------cC-CcccC
Confidence 799999998888899999999999999999999886532110 00 0000 00 11224
Q ss_pred HHHHHHHHHHhcCCCCCCCCCHH
Q 010309 475 VQKVVDLVYACTQHVPSMRPRMS 497 (513)
Q Consensus 475 ~~~l~~li~~cl~~dP~~RPs~~ 497 (513)
++.+.+++.+||+.||++||++.
T Consensus 202 ~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 202 SEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred CHHHHHHHHHHccCCHHHhcCCC
Confidence 56799999999999999999973
No 375
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.6e-35 Score=294.80 Aligned_cols=265 Identities=19% Similarity=0.317 Sum_probs=193.9
Q ss_pred HhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEeccc--chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCc---
Q 010309 222 ITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGD--- 295 (513)
Q Consensus 222 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~--- 295 (513)
+.++|.. .+.||+|++|.||+|... +++.||||++... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 13 ~~~~y~~-~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQN-LSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEE-EEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 3445543 456799999999999975 5889999998753 22234567889999999999999999998876654
Q ss_pred ---eEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecc
Q 010309 296 ---RYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGV 372 (513)
Q Consensus 296 ---~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 372 (513)
.++|+||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~df 162 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDF 162 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccc
Confidence 89999999 6799998863 4689999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCccccccceeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccc-hhHHhhh----
Q 010309 373 GLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQ-SIFEWAT---- 446 (513)
Q Consensus 373 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~-~~~~~~~---- 446 (513)
|++....... ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......... .+.+...
T Consensus 163 g~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 237 (343)
T cd07851 163 GLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDE 237 (343)
T ss_pred cccccccccc-----cCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Confidence 9998654321 11237888999998865 36788999999999999999999999764432110 0000000
Q ss_pred HHh---hcccccccccccccCCCCCC--CcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 447 PLV---QSHRYLELLDPLISSLSSDI--PEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 447 ~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
... ........+........... .....++++.+++.+||+.||++|||+.+|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 238 ELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 000 00000000000000000000 00123668999999999999999999999976
No 376
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-35 Score=245.36 Aligned_cols=261 Identities=19% Similarity=0.225 Sum_probs=194.0
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccch--hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.||+|.||+||+|+.. +++.||+|.++..+. .......+|+-+|+.++|.|||+++++...+...-+|+||| ..+|
T Consensus 9 kigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c-dqdl 87 (292)
T KOG0662|consen 9 KIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDL 87 (292)
T ss_pred hhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh-hHHH
Confidence 3599999999999964 588999999976532 23467889999999999999999999999999999999999 5588
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
..+... -++.++.+.++.++.|++.||.|.|++ ++.||||||.|.||+.+|.+||+|||+++.+.....-...
T Consensus 88 kkyfds---lng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipvrcysa- 160 (292)
T KOG0662|consen 88 KKYFDS---LNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA- 160 (292)
T ss_pred HHHHHh---cCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeec-
Confidence 888864 346799999999999999999999999 9999999999999999999999999999987644321111
Q ss_pred ecCcccccccccccccC-CCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHhhcccccc---ccccccc
Q 010309 389 MAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLVQSHRYLE---LLDPLIS 463 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 463 (513)
..-|..|.+|.++.+. -|+...|+||.|||+.|+.. |++.|.+.+-......+-+......+..+.. +.+....
T Consensus 161 -evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~y 239 (292)
T KOG0662|consen 161 -EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPY 239 (292)
T ss_pred -eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCccc
Confidence 1268899999999875 47899999999999999987 6666766554322211111111111111111 1111110
Q ss_pred CCCC-CCCcHH----HHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 464 SLSS-DIPEAG----VVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 464 ~~~~-~~~~~~----~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
...+ .....+ ....=++++.+.|.-+|..|.++++.++
T Consensus 240 p~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 240 PIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 0000 000111 2233478999999999999999999875
No 377
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-36 Score=269.07 Aligned_cols=263 Identities=19% Similarity=0.262 Sum_probs=193.1
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEecccch--hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC--------CceEEEE
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDH--------GDRYIVY 300 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--------~~~~lv~ 300 (513)
.||+|.||.||+|+.+ +|+.||+|++-.+.. .-.....+|+++|..|.|+|++.++++|... ..+|+||
T Consensus 24 kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf 103 (376)
T KOG0669|consen 24 KIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVF 103 (376)
T ss_pred hcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeH
Confidence 5699999999999965 478899987643321 2235678999999999999999999988642 3479999
Q ss_pred eeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCc
Q 010309 301 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 380 (513)
Q Consensus 301 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~ 380 (513)
.+|+. +|..+|.+ ....++..++.+++.++..||.|+|+. .|+|||+||.|+||+.++.+||+|||+++.+..
T Consensus 104 ~~ceh-DLaGlLsn---~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar~fs~ 176 (376)
T KOG0669|consen 104 DFCEH-DLAGLLSN---RKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLARAFST 176 (376)
T ss_pred HHhhh-hHHHHhcC---ccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccccceec
Confidence 99965 89998864 235689999999999999999999999 999999999999999999999999999987654
Q ss_pred ccccc--ceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccc--
Q 010309 381 EVMQE--RTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYL-- 455 (513)
Q Consensus 381 ~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 455 (513)
..... ......-|..|.+||.+.+. .|+++.|||..|||+.||+|+.+.+++.++.....++.....-....-+.
T Consensus 177 ~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~ 256 (376)
T KOG0669|consen 177 SKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNV 256 (376)
T ss_pred ccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCc
Confidence 33221 11122258999999999874 68999999999999999999999998876543222222111110000000
Q ss_pred ---ccc-----ccc----ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 456 ---ELL-----DPL----ISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 456 ---~~~-----~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.+. .|. .+.+.....+..-.++..+|+.++|..||.+||++++++.
T Consensus 257 d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 257 DNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred ccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 000 000 0000011111122347889999999999999999999986
No 378
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-35 Score=276.64 Aligned_cols=262 Identities=19% Similarity=0.240 Sum_probs=197.4
Q ss_pred cCCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcC-C-C----cEeeeeeEEeeCCceEEEE
Q 010309 228 EGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLH-H-P----NLVAVKGCCYDHGDRYIVY 300 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~----nIv~l~~~~~~~~~~~lv~ 300 (513)
....++|+|.||.|-...+. .+..||||+++... .-.+..+-|+++|+++. + | -+|.+.++|.-.++.+||+
T Consensus 92 ~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivf 170 (415)
T KOG0671|consen 92 EIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVF 170 (415)
T ss_pred ehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEE
Confidence 33456799999999998864 37899999997653 34556678999999993 2 2 3788999999999999999
Q ss_pred eeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecC-----------------
Q 010309 301 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE----------------- 363 (513)
Q Consensus 301 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~----------------- 363 (513)
|.+ |-|+.++|.. .+-.+++...++.|+.|++.+++|||+. +++|-||||+|||+.+
T Consensus 171 ell-G~S~~dFlk~--N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r 244 (415)
T KOG0671|consen 171 ELL-GLSTFDFLKE--NNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVCFIR 244 (415)
T ss_pred ecc-ChhHHHHhcc--CCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCccceec
Confidence 998 7799999975 4456799999999999999999999999 9999999999999832
Q ss_pred ---CCCeEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccch
Q 010309 364 ---EFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQS 440 (513)
Q Consensus 364 ---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~ 440 (513)
+..++|+|||.|....... .....|..|.|||++.+-.++.++||||+||||+||.||...|+..+..+...
T Consensus 245 ~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLa 319 (415)
T KOG0671|consen 245 PLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLA 319 (415)
T ss_pred cCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHH
Confidence 3458999999998654332 12237899999999999999999999999999999999999999887654333
Q ss_pred hHHhhhHHhhcccccc----------ccc---ccccC----CC--------CCCCcHHHHHHHHHHHHHhcCCCCCCCCC
Q 010309 441 IFEWATPLVQSHRYLE----------LLD---PLISS----LS--------SDIPEAGVVQKVVDLVYACTQHVPSMRPR 495 (513)
Q Consensus 441 ~~~~~~~~~~~~~~~~----------~~~---~~~~~----~~--------~~~~~~~~~~~l~~li~~cl~~dP~~RPs 495 (513)
+.+.+........+.. -++ ....+ .. .-........+|.+|+++||..||.+|+|
T Consensus 320 MMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiT 399 (415)
T KOG0671|consen 320 MMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRIT 399 (415)
T ss_pred HHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccccc
Confidence 3332211110000000 000 00000 00 00112234567999999999999999999
Q ss_pred HHHHHH
Q 010309 496 MSHVVH 501 (513)
Q Consensus 496 ~~evl~ 501 (513)
+.|++.
T Consensus 400 l~EAL~ 405 (415)
T KOG0671|consen 400 LREALS 405 (415)
T ss_pred HHHHhc
Confidence 999985
No 379
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-35 Score=276.37 Aligned_cols=234 Identities=24% Similarity=0.307 Sum_probs=193.6
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccchh---cHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ---RKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+||+|+||.|.+|..+ +.+.+|||+++++-.. +.+--+.|-++|... +-|.++++..++..-+.+|.||||+.|
T Consensus 355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnG 434 (683)
T KOG0696|consen 355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNG 434 (683)
T ss_pred EEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecC
Confidence 47899999999999865 4678999999886332 223345677787777 578999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|-..+++ -..+.+..+..++..||-||-|||++ +|+.||||.+|||+|.+|++||+|||+++..-.. ..
T Consensus 435 GDLMyhiQQ----~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~--~~ 505 (683)
T KOG0696|consen 435 GDLMYHIQQ----VGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD--GV 505 (683)
T ss_pred chhhhHHHH----hcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccccC--Cc
Confidence 999888864 35688889999999999999999999 9999999999999999999999999999854333 23
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
.+...+||+.|+|||++...+|+.++|-|||||+||||+.|.+||++.++.+.-+.+ .+.
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI---------------~eh----- 565 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAI---------------MEH----- 565 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH---------------HHc-----
Confidence 344567999999999999999999999999999999999999999998765321111 111
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCC
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRP 494 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP 494 (513)
.-..+...+.+...+....|...|.+|.
T Consensus 566 -nvsyPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 566 -NVSYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred -cCcCcccccHHHHHHHHHHhhcCCcccc
Confidence 2233456777899999999999999994
No 380
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-34 Score=289.55 Aligned_cols=231 Identities=25% Similarity=0.294 Sum_probs=187.6
Q ss_pred eecccCceEEEEEEe-CCCCEEEEEEecccchhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeeccCCCHH
Q 010309 232 LLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 309 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 309 (513)
-+|.|+|+.|-.+.. .+++..++|++.+. ..+..+|+.++... +||||+++.+++.+..+.|+|||.+.++-|.
T Consensus 329 ~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell 404 (612)
T KOG0603|consen 329 ELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELL 404 (612)
T ss_pred ccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHH
Confidence 369999999998885 46889999999765 22345677666665 7999999999999999999999999999887
Q ss_pred HHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEe-cCCCCeEEecccccccCCcccccccee
Q 010309 310 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL-DEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 310 ~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll-~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
+.+.. .+.....+..|+.+|+.|+.|||++ |+|||||||+|||+ ++.++++|+|||.++..... ..
T Consensus 405 ~ri~~-----~~~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-----~~ 471 (612)
T KOG0603|consen 405 RRIRS-----KPEFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-----CD 471 (612)
T ss_pred HHHHh-----cchhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh-----hc
Confidence 76643 2223377888999999999999999 99999999999999 58899999999999877654 22
Q ss_pred ecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 389 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
..+-|..|.|||++....|++++|+||||++||+|++|+.||...... ..+. ..+. ..
T Consensus 472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~----~~i~----------------~~ 529 (612)
T KOG0603|consen 472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIH----TRIQ----------------MP 529 (612)
T ss_pred ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHHH----Hhhc----------------CC
Confidence 334688999999999999999999999999999999999999865442 0110 0000 11
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.....+++..++|+.+||+.||.+||++.++..
T Consensus 530 ~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 530 KFSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 112457788999999999999999999999875
No 381
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.4e-33 Score=303.93 Aligned_cols=140 Identities=24% Similarity=0.372 Sum_probs=125.6
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||+|+||.||+|... +++.||||+++.... .....+..|+.++..++||||+++++++...+..||||||+.+
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g 88 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIG 88 (669)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCC
Confidence 456799999999999975 589999999976432 2246788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK 376 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~ 376 (513)
++|.+++.. ...+++..++.++.||+.||+|||.. +|+||||||+|||++.++.+||+|||+++
T Consensus 89 ~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 89 GDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999864 24588999999999999999999999 99999999999999999999999999986
No 382
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=286.38 Aligned_cols=235 Identities=21% Similarity=0.280 Sum_probs=199.0
Q ss_pred eecccCceEEEEEEeCCCC-EEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 232 LLGDSKTGGTYSGILPDGS-RVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
-||-|+||.|=++..+... .+|+|.+++.. ....+.+..|-.+|...+.|.||++|..|.+....|++||-|-||.
T Consensus 427 TLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGE 506 (732)
T KOG0614|consen 427 TLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGE 506 (732)
T ss_pred hcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCch
Confidence 3699999999999875433 48999998753 3445668889999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|...|++ +..++......++..+++|++|||++ +||.|||||+|.+++.+|-+||.|||+|+.+... ..+
T Consensus 507 lWTiLrd----Rg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g---~KT 576 (732)
T KOG0614|consen 507 LWTILRD----RGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG---RKT 576 (732)
T ss_pred hhhhhhh----cCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccC---Cce
Confidence 9999964 56799999999999999999999999 9999999999999999999999999999987654 345
Q ss_pred eecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCC
Q 010309 388 VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSS 467 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (513)
...+||+.|.|||++.+...+.++|.||||+++|||++|.+||++.++...-+++ ++++..
T Consensus 577 wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~I-------------------LkGid~ 637 (732)
T KOG0614|consen 577 WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLI-------------------LKGIDK 637 (732)
T ss_pred eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH-------------------Hhhhhh
Confidence 5677999999999999999999999999999999999999999988764222211 111112
Q ss_pred CCCcHHHHHHHHHHHHHhcCCCCCCCCC
Q 010309 468 DIPEAGVVQKVVDLVYACTQHVPSMRPR 495 (513)
Q Consensus 468 ~~~~~~~~~~l~~li~~cl~~dP~~RPs 495 (513)
-..+..+.....+||+++...+|.+|..
T Consensus 638 i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 638 IEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 2234456667899999999999999975
No 383
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=302.40 Aligned_cols=252 Identities=21% Similarity=0.222 Sum_probs=201.5
Q ss_pred hhCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccc---hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEE
Q 010309 223 TKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYI 298 (513)
Q Consensus 223 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 298 (513)
..+|.. -++||+|+||.|..++.+ +++.||+|++.+.. .....-|..|-.+|..-+.+-|+.+.-.|.+..++|+
T Consensus 74 ~~Dfei-lKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYl 152 (1317)
T KOG0612|consen 74 AEDFEI-LKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYL 152 (1317)
T ss_pred HHhhHH-HHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEE
Confidence 334433 467899999999999975 58899999998742 2344668889999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccC
Q 010309 299 VYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 378 (513)
Q Consensus 299 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~ 378 (513)
|||||+||+|-.++.+. ..+++..++.++..|+.||+-||+. |+|||||||+|||||..|++||+|||.+-.+
T Consensus 153 VMdY~pGGDlltLlSk~----~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 153 VMDYMPGGDLLTLLSKF----DRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKM 225 (1317)
T ss_pred EEecccCchHHHHHhhc----CCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhc
Confidence 99999999999999752 2699999999999999999999999 9999999999999999999999999999888
Q ss_pred CccccccceeecCccccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccc
Q 010309 379 PWEVMQERTVMAGGTYGYLAPEFVYR-----NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHR 453 (513)
Q Consensus 379 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 453 (513)
..+...... ...|||.|++||++.. +.|+..+|-||+||++|||+.|..||...+- ++-........
T Consensus 226 ~~dG~V~s~-~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl------veTY~KIm~hk- 297 (1317)
T KOG0612|consen 226 DADGTVRSS-VAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL------VETYGKIMNHK- 297 (1317)
T ss_pred CCCCcEEec-cccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH------HHHHHHHhchh-
Confidence 755443332 3449999999999862 5789999999999999999999999975432 22111111110
Q ss_pred ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCC---HHHHHH
Q 010309 454 YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPR---MSHVVH 501 (513)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 501 (513)
..+ ..+....++++..+||.+.+. +|+.|.. ++++..
T Consensus 298 ------~~l----~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 298 ------ESL----SFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred ------hhc----CCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 011 111234478899999999885 7888987 777653
No 384
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=3.7e-33 Score=264.17 Aligned_cols=238 Identities=25% Similarity=0.378 Sum_probs=192.4
Q ss_pred CceEEEEEEeC-CCCEEEEEEecccchhc-HHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHHHhcc
Q 010309 237 KTGGTYSGILP-DGSRVAVKRLKRSSFQR-KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHH 314 (513)
Q Consensus 237 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 314 (513)
+||.||+|... +|+.+|+|++....... .+.+.+|++.+++++|+||+++++.+......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999986 48999999998765444 67899999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeecCccc
Q 010309 315 IPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY 394 (513)
Q Consensus 315 ~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~ 394 (513)
. ..+++..+..++.+++.+|.|||+. +++|+||+|+||+++.++.++|+|||.+........ .....++.
T Consensus 81 ~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~ 150 (244)
T smart00220 81 R----GRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGL---LTTFVGTP 150 (244)
T ss_pred c----cCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeeccccc---cccccCCc
Confidence 2 2389999999999999999999999 999999999999999999999999999987654321 11223788
Q ss_pred ccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHH
Q 010309 395 GYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGV 474 (513)
Q Consensus 395 ~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (513)
.|+|||.+....++.++||||||+++++|++|..||...... ....+.. ...... ........
T Consensus 151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~--~~~~~~~----~~~~~~-----------~~~~~~~~ 213 (244)
T smart00220 151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL--LELFKKI----GKPKPP-----------FPPPEWKI 213 (244)
T ss_pred CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHH----hccCCC-----------CccccccC
Confidence 999999998888899999999999999999999998763221 1111110 000000 00000014
Q ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 475 VQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 475 ~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+.++.+++.+||..+|++||++.++++
T Consensus 214 ~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 214 SPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred CHHHHHHHHHHccCCchhccCHHHHhh
Confidence 467999999999999999999999986
No 385
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-34 Score=272.02 Aligned_cols=251 Identities=22% Similarity=0.316 Sum_probs=194.3
Q ss_pred ceecccCceEEEEEEe-CCCCEEEEEEecccc-------hhcHHHHHHHHHHHhhcCCCcEeeeeeEEee-CCceEEEEe
Q 010309 231 RLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSS-------FQRKKEFYSEIGRFARLHHPNLVAVKGCCYD-HGDRYIVYE 301 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~lv~e 301 (513)
.+||+|+|+.||+|.+ ...+.||||+-.... ..-.+...+|..|.+.|.||.||++|+++.- .+.++-|+|
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLE 548 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLE 548 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeee
Confidence 4689999999999995 457889999865321 1112456789999999999999999999874 467789999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecC---CCCeEEecccccccC
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE---EFGAHLMGVGLSKFV 378 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~---~~~~kl~Dfg~~~~~ 378 (513)
||+|.+|+-+|.. .+.+++.+++.|+.||+.||.||.+. +++|||-||||.|||+-+ -|.+||.|||+++.+
T Consensus 549 YceGNDLDFYLKQ----hklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIM 623 (775)
T KOG1151|consen 549 YCEGNDLDFYLKQ----HKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIM 623 (775)
T ss_pred ecCCCchhHHHHh----hhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhhc
Confidence 9999999999954 56799999999999999999999986 789999999999999954 467999999999998
Q ss_pred Ccccccc-----ceeecCcccccccccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHh
Q 010309 379 PWEVMQE-----RTVMAGGTYGYLAPEFVYRN----ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLV 449 (513)
Q Consensus 379 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (513)
..+.... .+....||..|++||.+.-+ ..+.|.||||+|||+|..+.|+.||...... +. ..
T Consensus 624 dddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ--Qd-------IL 694 (775)
T KOG1151|consen 624 DDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ--QD-------IL 694 (775)
T ss_pred cCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH--HH-------HH
Confidence 7654332 12234499999999988643 4688999999999999999999999764321 11 11
Q ss_pred hcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 450 QSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+...+.....- ...+....+.+..++|++||+..-++|....++..
T Consensus 695 qeNTIlkAtEV------qFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 695 QENTILKATEV------QFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred hhhchhcceec------cCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 22222111111 11122345678999999999999999988877653
No 386
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-33 Score=285.71 Aligned_cols=247 Identities=23% Similarity=0.360 Sum_probs=202.6
Q ss_pred cCCceecccCceEEEEEEe-CCCCEEEEEEecccchhcHHHHHHHHHHHhhc-CCCcEeeeeeEEee-----CCceEEEE
Q 010309 228 EGNRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYD-----HGDRYIVY 300 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~-----~~~~~lv~ 300 (513)
+....||.|.+|.||+++. ++++.+|||++.... ...+++..|.++|+.+ .|||++.++|++.. ++.++|||
T Consensus 22 ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVM 100 (953)
T KOG0587|consen 22 EIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVM 100 (953)
T ss_pred EEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEe
Confidence 4455789999999999994 579999999987653 4456788899999988 79999999999874 56789999
Q ss_pred eeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCc
Q 010309 301 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 380 (513)
Q Consensus 301 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~ 380 (513)
|||.+||..+++++.. +..+.|..+..|++.++.||.+||.+ .++|||||-.|||++.++.|||.|||.+..++.
T Consensus 101 EfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSaQlds 175 (953)
T KOG0587|consen 101 EFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDS 175 (953)
T ss_pred eccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeeeeeec
Confidence 9999999999998754 67899999999999999999999999 999999999999999999999999999987765
Q ss_pred cccccceeecCcccccccccccccC-----CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccc
Q 010309 381 EVMQERTVMAGGTYGYLAPEFVYRN-----ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYL 455 (513)
Q Consensus 381 ~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (513)
..... ....||+.|||||++.-. .|+..+|+||||++..||.-|.+|+.++.+.. .+
T Consensus 176 T~grR--nT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr--aL-------------- 237 (953)
T KOG0587|consen 176 TVGRR--NTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR--AL-------------- 237 (953)
T ss_pred ccccc--cCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh--hh--------------
Confidence 43332 233499999999999643 46778999999999999999999998766531 11
Q ss_pred ccccccccCCC-CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 456 ELLDPLISSLS-SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 456 ~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
-++...-+ ....+..-++++.++|..||..|-.+||++.++++
T Consensus 238 ---F~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 238 ---FLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ---ccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 01110001 11124567889999999999999999999999885
No 387
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=3e-34 Score=292.45 Aligned_cols=250 Identities=24% Similarity=0.330 Sum_probs=189.9
Q ss_pred hCcccCCceecccCceE-EEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEe
Q 010309 224 KNFSEGNRLLGDSKTGG-TYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYE 301 (513)
Q Consensus 224 ~~~~~~~~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e 301 (513)
+.+....+++|.|+.|+ ||+|.. +|+.||||++-.. ...-..+|+..|+.- +|||||++++.-.++...||..|
T Consensus 508 k~~~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 508 KLFFSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eeeeccHHHcccCCCCcEEEEEee-CCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 44555567889999875 799999 8999999998544 234568999999988 79999999999889999999999
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecC---C--CCeEEecccccc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE---E--FGAHLMGVGLSK 376 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~---~--~~~kl~Dfg~~~ 376 (513)
.| ..+|.+++...............+.++.|+++||++||+. +||||||||.||||+. + ..++|+|||+++
T Consensus 584 LC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 584 LC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred Hh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 99 5699999976311111111144577899999999999998 9999999999999976 3 468999999999
Q ss_pred cCCccccccc-eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCccccchhHHhhhHHhhcccc
Q 010309 377 FVPWEVMQER-TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSG-RRPAQAVDSVCWQSIFEWATPLVQSHRY 454 (513)
Q Consensus 377 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (513)
.+......-. .....||-+|+|||++....-+.++||||+||++|+.++| .+||.+.-.. .........-
T Consensus 660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R--------~~NIl~~~~~ 731 (903)
T KOG1027|consen 660 KLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--------QANILTGNYT 731 (903)
T ss_pred ccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh--------hhhhhcCccc
Confidence 9876543222 2234499999999999998888899999999999999995 9999764321 0000000000
Q ss_pred cccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 455 LELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.. .-.+..+. +..+||.+|++++|..||++.+|+.
T Consensus 732 L~----------~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 732 LV----------HLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ee----------eeccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 00 00111112 7899999999999999999999974
No 388
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=243.51 Aligned_cols=198 Identities=25% Similarity=0.444 Sum_probs=168.7
Q ss_pred eecccCceEEEEEEe-CCCCEEEEEEeccc-chhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 232 LLGDSKTGGTYSGIL-PDGSRVAVKRLKRS-SFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
-||+|++|.|-+-++ .+|+..|+|.+... ..+..+++.+|+.+..+. ..|.+|.++|........++.||.| ..||
T Consensus 53 elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M-~tSl 131 (282)
T KOG0984|consen 53 ELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM-DTSL 131 (282)
T ss_pred hhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh-hhhH
Confidence 469999999987775 47999999999765 334567788899887766 7999999999999999999999999 5688
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccccee
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 388 (513)
+.+-.+.-+.+..+++..+-+|+..++.||.|||++. .++|||+||+|||++.+|++|++|||++-.+..+.....
T Consensus 132 dkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~-- 207 (282)
T KOG0984|consen 132 DKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTM-- 207 (282)
T ss_pred HHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHH--
Confidence 8877665566788999999999999999999999985 999999999999999999999999999987765433221
Q ss_pred ecCccccccccccccc----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCc
Q 010309 389 MAGGTYGYLAPEFVYR----NELTTKSDVYSFGVLLLEIVSGRRPAQAVDS 435 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~----~~~~~~sDvwSlGvil~elltg~~p~~~~~~ 435 (513)
..|...|||||.+.. ..|+.+|||||||+++.||.+++.||.....
T Consensus 208 -daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 208 -DAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred -hcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 227889999998853 3689999999999999999999999986543
No 389
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.2e-32 Score=278.57 Aligned_cols=263 Identities=17% Similarity=0.168 Sum_probs=177.1
Q ss_pred hCcccCCceecccCceEEEEEEe-----------------CCCCEEEEEEecccchhcHHH--------------HHHHH
Q 010309 224 KNFSEGNRLLGDSKTGGTYSGIL-----------------PDGSRVAVKRLKRSSFQRKKE--------------FYSEI 272 (513)
Q Consensus 224 ~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E~ 272 (513)
++|.. .++||+|+||.||+|.. .+++.||||++........++ ...|+
T Consensus 145 d~F~i-~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 145 DDFQL-RDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred cCceE-eeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 34444 45679999999999964 235689999987543322223 33466
Q ss_pred HHHhhcCCCcE-----eeeeeEEee--------CCceEEEEeeccCCCHHHHhccCCC--------------------CC
Q 010309 273 GRFARLHHPNL-----VAVKGCCYD--------HGDRYIVYEFVVNGPLDRWLHHIPR--------------------GG 319 (513)
Q Consensus 273 ~~l~~l~h~nI-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~--------------------~~ 319 (513)
.++.+++|.++ +++++++.. .+..+|||||+++++|.++++.... ..
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777766554 667777653 3567999999999999999864211 01
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeecCcccccccc
Q 010309 320 RSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAP 399 (513)
Q Consensus 320 ~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aP 399 (513)
..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.......... .....+++.|+||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~-~~~g~~tp~Y~aP 379 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFN-PLYGMLDPRYSPP 379 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccC-ccccCCCcceeCh
Confidence 2356778899999999999999999 99999999999999999999999999997654322111 1112257899999
Q ss_pred cccccCCC----------------------CchhhHHHHHHHHHHHHcCCC-CCCCCCccccchhHH--hhhHHhhcccc
Q 010309 400 EFVYRNEL----------------------TTKSDVYSFGVLLLEIVSGRR-PAQAVDSVCWQSIFE--WATPLVQSHRY 454 (513)
Q Consensus 400 E~~~~~~~----------------------~~~sDvwSlGvil~elltg~~-p~~~~~~~~~~~~~~--~~~~~~~~~~~ 454 (513)
|.+..... ..+.||||+||++|+|++|.. |+....... ..+.. .....+.
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~-~~~~~~~~~~~~~r---- 454 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFN-TELRQYDNDLNRWR---- 454 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhh-hHHhhccchHHHHH----
Confidence 98754321 124699999999999999875 665322110 00000 0000000
Q ss_pred cccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCC---CCCCCHHHHHH
Q 010309 455 LELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVP---SMRPRMSHVVH 501 (513)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~ 501 (513)
....... ........++...+|+.+||..+| .+|+|++|+|+
T Consensus 455 -~~~~~~~----~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 455 -MYKGQKY----DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred -hhcccCC----CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 0000000 001112345678999999999876 68999999985
No 390
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=3.8e-32 Score=285.80 Aligned_cols=262 Identities=14% Similarity=0.134 Sum_probs=161.6
Q ss_pred cCCceecccCceEEEEEEeC-C----CCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeE------EeeCCce
Q 010309 228 EGNRLLGDSKTGGTYSGILP-D----GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDR 296 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~------~~~~~~~ 296 (513)
+..+.||+|+||.||+|.+. + +..||||++..... .+....| .+....+.+++.++.. .......
T Consensus 135 ~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (566)
T PLN03225 135 VLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDEY 210 (566)
T ss_pred EEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccccCCce
Confidence 44567899999999999975 4 68999999865421 1111111 1122222222222211 2456678
Q ss_pred EEEEeeccCCCHHHHhccCCCC----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceE
Q 010309 297 YIVYEFVVNGPLDRWLHHIPRG----------------GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 360 (513)
Q Consensus 297 ~lv~e~~~~gsL~~~l~~~~~~----------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIl 360 (513)
++|+||+.+++|.+++...... ........+..++.||+.||.|||+. +|+||||||+|||
T Consensus 211 ~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~NIL 287 (566)
T PLN03225 211 WLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQNII 287 (566)
T ss_pred EEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHHHEE
Confidence 9999999999999988642100 01112345668999999999999999 9999999999999
Q ss_pred ecC-CCCeEEecccccccCCccccccceeecCcccccccccccccC----------------------CCCchhhHHHHH
Q 010309 361 LDE-EFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRN----------------------ELTTKSDVYSFG 417 (513)
Q Consensus 361 l~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~sDvwSlG 417 (513)
++. ++.+||+|||+++.+........ ....+++.|+|||.+... .++.++||||||
T Consensus 288 l~~~~~~~KL~DFGlA~~l~~~~~~~~-~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlG 366 (566)
T PLN03225 288 FSEGSGSFKIIDLGAAADLRVGINYIP-KEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAG 366 (566)
T ss_pred EeCCCCcEEEEeCCCccccccccccCC-cccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHH
Confidence 986 57899999999986543322111 122388999999966422 234467999999
Q ss_pred HHHHHHHcCCCCCCCCCccccchhHHhhhHH-hhcccccccccccccC-CCCCC-CcHHHHHHHHHHHHHhcCCCCCCCC
Q 010309 418 VLLLEIVSGRRPAQAVDSVCWQSIFEWATPL-VQSHRYLELLDPLISS-LSSDI-PEAGVVQKVVDLVYACTQHVPSMRP 494 (513)
Q Consensus 418 vil~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~li~~cl~~dP~~RP 494 (513)
|+||||+++..|+.... ..+....... .....+...+.+.... ..... ..........+||.+||+.||++||
T Consensus 367 viL~el~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ 442 (566)
T PLN03225 367 LIFLQMAFPNLRSDSNL----IQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRI 442 (566)
T ss_pred HHHHHHHhCcCCCchHH----HHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCC
Confidence 99999999776643211 0110000000 0000000000100000 00000 0000122456899999999999999
Q ss_pred CHHHHHH
Q 010309 495 RMSHVVH 501 (513)
Q Consensus 495 s~~evl~ 501 (513)
|+.++++
T Consensus 443 ta~e~L~ 449 (566)
T PLN03225 443 SAKAALA 449 (566)
T ss_pred CHHHHhC
Confidence 9999987
No 391
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=4.1e-32 Score=268.14 Aligned_cols=242 Identities=21% Similarity=0.247 Sum_probs=188.9
Q ss_pred ccCCceecccCceEEEEEEe-CCCCEEEEEEecccchhc---HHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEee
Q 010309 227 SEGNRLLGDSKTGGTYSGIL-PDGSRVAVKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 302 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 302 (513)
....+-||-|+||+|.++.. ++...+|.|.+++.+.-. ...+..|-.||..-..+-||+||-.|.+.+.+|+||+|
T Consensus 631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdY 710 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY 710 (1034)
T ss_pred eEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEec
Confidence 34455689999999999984 457789999998764333 34467789999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~ 382 (513)
++||++-.+|-+ ...+++..++.++..+..|+++.|.. |+|||||||+|||||.+|++||.|||++.-+....
T Consensus 711 IPGGDmMSLLIr----mgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 711 IPGGDMMSLLIR----MGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred cCCccHHHHHHH----hccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceecc
Confidence 999999998854 35689999999999999999999999 99999999999999999999999999986442110
Q ss_pred c--------cc--------------------------------ceeecCcccccccccccccCCCCchhhHHHHHHHHHH
Q 010309 383 M--------QE--------------------------------RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLE 422 (513)
Q Consensus 383 ~--------~~--------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~e 422 (513)
. +. ......||+.|+|||++....++..+|-||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 0 00 0001128999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCccccc-hhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCC
Q 010309 423 IVSGRRPAQAVDSVCWQ-SIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRP 494 (513)
Q Consensus 423 lltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 494 (513)
|+.|++||-...+.+.+ .++.|... + ...+....+.++.++|.++. -+++.|.
T Consensus 864 m~~g~~pf~~~tp~~tq~kv~nw~~~----------l--------~~~~~~~ls~e~~~li~kLc-~sad~RL 917 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGETQYKVINWRNF----------L--------HIPYQGNLSKEALDLIQKLC-CSADSRL 917 (1034)
T ss_pred HhhCCCCccCCCCCcceeeeeehhhc----------c--------ccccccccCHHHHHHHHHHh-cChhhhh
Confidence 99999999876654322 22222211 1 12223345667778877654 3566664
No 392
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.6e-33 Score=249.71 Aligned_cols=265 Identities=19% Similarity=0.255 Sum_probs=194.1
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEeccc--chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCC-----ceEEEEe
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG-----DRYIVYE 301 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~lv~e 301 (513)
.+-||-|+||.||...++ +|+.||+|++... +....+.+.+|+++|..++|.|++..+++..-.. +.|+++|
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE 137 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE 137 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence 456899999999999974 6999999998653 3344578999999999999999999999876543 4578899
Q ss_pred eccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 302 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 302 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
.| ..+|..++- ....++...+.-++.||+.||.|||+. +|.||||||.|.|++++..+||+|||+++.....
T Consensus 138 Lm-QSDLHKIIV----SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 138 LM-QSDLHKIIV----SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HH-Hhhhhheec----cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchh
Confidence 88 557877774 346688888999999999999999999 9999999999999999999999999999976544
Q ss_pred ccccceeecCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhH--Hh------hcc
Q 010309 382 VMQERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATP--LV------QSH 452 (513)
Q Consensus 382 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~--~~------~~~ 452 (513)
.....+ ...-|..|.|||++++. .|+.+.||||.|||+.||+..+..|+...+....+++..... .. -++
T Consensus 210 ~~~hMT-qEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG 288 (449)
T KOG0664|consen 210 DRLNMT-HEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG 288 (449)
T ss_pred hhhhhH-HHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence 322211 12257899999999975 689999999999999999999999987665433222211100 00 000
Q ss_pred ccccccc-----ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 010309 453 RYLELLD-----PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQL 503 (513)
Q Consensus 453 ~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 503 (513)
....++. +.+.-+.....+..-..+...+..+++..||.+|.+.++.+..+
T Consensus 289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 0001111 11111111111112233567888999999999999998887643
No 393
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=245.57 Aligned_cols=242 Identities=23% Similarity=0.293 Sum_probs=190.4
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchh---cHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQ---RKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
-++||+|+|+.|..+++. +.+.+|+|++++.-.. +.+-.+.|-.+..+. +||.+|.+..+|..+..+++|.||++
T Consensus 255 l~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ 334 (593)
T KOG0695|consen 255 LRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVN 334 (593)
T ss_pred eeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEec
Confidence 357899999999999964 5789999999876333 334456777777766 79999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 384 (513)
||+|--++++ .+.++++.++.+...|..||.|||+. ||+.||||.+|||+|..|++||+|+|+.+.--.. .
T Consensus 335 ggdlmfhmqr----qrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l~~--g 405 (593)
T KOG0695|consen 335 GGDLMFHMQR----QRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP--G 405 (593)
T ss_pred Ccceeeehhh----hhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCCCC--C
Confidence 9999766643 46799999999999999999999999 9999999999999999999999999999854332 2
Q ss_pred cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcc-ccchhHHhhhHHhhccccccccccccc
Q 010309 385 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSV-CWQSIFEWATPLVQSHRYLELLDPLIS 463 (513)
Q Consensus 385 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
..+...+|||.|+|||++.+..|....|-|+|||+++||+.|+.||+-.... ..++.-++.-..+ +...+
T Consensus 406 d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi--------lekqi- 476 (593)
T KOG0695|consen 406 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI--------LEKQI- 476 (593)
T ss_pred cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH--------hhhcc-
Confidence 3344567999999999999999999999999999999999999999743211 1111112211111 11111
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCC
Q 010309 464 SLSSDIPEAGVVQKVVDLVYACTQHVPSMRP 494 (513)
Q Consensus 464 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 494 (513)
..+...+.....+++.-|++||.+|.
T Consensus 477 -----riprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 477 -----RIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred -----cccceeehhhHHHHHHhhcCCcHHhc
Confidence 11223444577888999999999995
No 394
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-30 Score=250.37 Aligned_cols=129 Identities=19% Similarity=0.261 Sum_probs=108.5
Q ss_pred ccCCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcC-----C---CcEeeeeeEEee----C
Q 010309 227 SEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLH-----H---PNLVAVKGCCYD----H 293 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~nIv~l~~~~~~----~ 293 (513)
+...+.||-|.|++||++.+. +.+.||+|+.+.. ..-.+..+.|+++|++++ | .+||+|++.|.. +
T Consensus 80 Y~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG 158 (590)
T KOG1290|consen 80 YHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNG 158 (590)
T ss_pred EEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCC
Confidence 344456799999999999964 5788999999765 244567789999999983 3 469999999975 4
Q ss_pred CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEe
Q 010309 294 GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL 361 (513)
Q Consensus 294 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll 361 (513)
.+.+||+|++ |.+|..+|.. ..-+.++...+.+|++||+.||.|||..| +|||-||||+|||+
T Consensus 159 ~HVCMVfEvL-GdnLLklI~~--s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 159 QHVCMVFEVL-GDNLLKLIKY--SNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred cEEEEEehhh-hhHHHHHHHH--hCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 5789999999 7788888875 33467999999999999999999999998 99999999999998
No 395
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=2.8e-31 Score=232.62 Aligned_cols=253 Identities=19% Similarity=0.284 Sum_probs=191.6
Q ss_pred eecccCceEEEEEE-eCCCCEEEEEEecccchhcHHHHHHHHHHHhhcC-CCcEeeeeeEEeeC--CceEEEEeeccCCC
Q 010309 232 LLGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLH-HPNLVAVKGCCYDH--GDRYIVYEFVVNGP 307 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~--~~~~lv~e~~~~gs 307 (513)
.+|+|.+++||.|. ..++++++||++++. ..+.+.+|+++|+.|. ||||++++++..++ ....|++||+.+.+
T Consensus 45 k~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~D 121 (338)
T KOG0668|consen 45 KVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTD 121 (338)
T ss_pred HHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhcccc
Confidence 45999999999998 457899999999764 4567899999999996 99999999998875 45689999999998
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC-CCeEEecccccccCCccccccc
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE-FGAHLMGVGLSKFVPWEVMQER 386 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~~~~~~~~~~~~~ 386 (513)
+..+. ..++...++.++.+++.||.|+|++ ||.|||+||.|++||.. -.++|+|.|+|.+.........
T Consensus 122 fk~ly-------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnV 191 (338)
T KOG0668|consen 122 FKQLY-------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 191 (338)
T ss_pred HHHHh-------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCCCceeee
Confidence 88766 3488889999999999999999999 99999999999999865 4599999999988765443322
Q ss_pred eeecCccccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhc------cccccccc
Q 010309 387 TVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQS------HRYLELLD 459 (513)
Q Consensus 387 ~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 459 (513)
. ..+..|.-||++.. ..|+.+-|+|||||+|..|+..+.||....+. ..+++..+.-+-.. .++.-.++
T Consensus 192 R---VASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN-~DQLVkIakVLGt~el~~Yl~KY~i~Ld 267 (338)
T KOG0668|consen 192 R---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVKIAKVLGTDELYAYLNKYQIDLD 267 (338)
T ss_pred e---eehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCC-HHHHHHHHHHhChHHHHHHHHHHccCCC
Confidence 2 26678899999875 45788999999999999999999998654432 22333222211100 00111122
Q ss_pred ccccC------------CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 460 PLISS------------LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 460 ~~~~~------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+.... ........-.++++.+|+.+.|..|-++|||+.|.+.
T Consensus 268 p~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 268 PQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred hhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 22111 0011111223578999999999999999999999874
No 396
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.97 E-value=1e-31 Score=260.19 Aligned_cols=272 Identities=17% Similarity=0.175 Sum_probs=204.0
Q ss_pred HHHhhCcccCCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcC------CCcEeeeeeEEee
Q 010309 220 RSITKNFSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLH------HPNLVAVKGCCYD 292 (513)
Q Consensus 220 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~nIv~l~~~~~~ 292 (513)
.++..+.++.....|+|-|++|.+|... .|..||||+|..... -.+.=+.|+++|++|+ --|+++|+..|..
T Consensus 427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 427 GELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred hhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 3444455555556799999999999965 488999999986532 2344568999999995 3579999999999
Q ss_pred CCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC-CCeEEec
Q 010309 293 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE-FGAHLMG 371 (513)
Q Consensus 293 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~D 371 (513)
.+++|||+|-+ ..+|.++|....+ +..|....+..++.|+..||..|-.. +|+|.||||+|||+++. ..+||||
T Consensus 506 knHLClVFE~L-slNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCD 580 (752)
T KOG0670|consen 506 KNHLCLVFEPL-SLNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCD 580 (752)
T ss_pred cceeEEEehhh-hchHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeecc
Confidence 99999999998 6799999987543 35688899999999999999999988 99999999999999875 4589999
Q ss_pred ccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhH----
Q 010309 372 VGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATP---- 447 (513)
Q Consensus 372 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~---- 447 (513)
||.|............ -+..|.|||++.+.+|+...|+||+||+||||.||+..|.+.+......++.....
T Consensus 581 fGSA~~~~eneitPYL----VSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~ 656 (752)
T KOG0670|consen 581 FGSASFASENEITPYL----VSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPN 656 (752)
T ss_pred CccccccccccccHHH----HHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcH
Confidence 9999887655433322 35679999999999999999999999999999999999988765543333221111
Q ss_pred -Hhhcccc---------------------------cccccc------cccC-CCCCCCcHHHHHHHHHHHHHhcCCCCCC
Q 010309 448 -LVQSHRY---------------------------LELLDP------LISS-LSSDIPEAGVVQKVVDLVYACTQHVPSM 492 (513)
Q Consensus 448 -~~~~~~~---------------------------~~~~~~------~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~ 492 (513)
++..+.+ ...+.| .+.. .............+.+|+.+||..||++
T Consensus 657 KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~K 736 (752)
T KOG0670|consen 657 KMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEK 736 (752)
T ss_pred HHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhh
Confidence 1100000 001111 0000 0001112346678999999999999999
Q ss_pred CCCHHHHHH
Q 010309 493 RPRMSHVVH 501 (513)
Q Consensus 493 RPs~~evl~ 501 (513)
|.|..++|.
T Consensus 737 Rit~nqAL~ 745 (752)
T KOG0670|consen 737 RITVNQALK 745 (752)
T ss_pred cCCHHHHhc
Confidence 999999875
No 397
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=1.7e-29 Score=233.27 Aligned_cols=211 Identities=29% Similarity=0.498 Sum_probs=182.9
Q ss_pred ecccCceEEEEEEeCC-CCEEEEEEecccchh-cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHH
Q 010309 233 LGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQ-RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 310 (513)
Q Consensus 233 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 310 (513)
||+|.+|.||++...+ ++.+++|++...... ..+.+.+|+..++.+.|++|+++++++......++++|++.+++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 5899999999999854 899999999866432 34679999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecC-CCCeEEecccccccCCccccccceee
Q 010309 311 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE-EFGAHLMGVGLSKFVPWEVMQERTVM 389 (513)
Q Consensus 311 ~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~ 389 (513)
++.... ..++...+..++.+++.+|++||+. +++|+||+|.||+++. ++.++|+|||.+........ ....
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~ 152 (215)
T cd00180 81 LLKENE---GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKT 152 (215)
T ss_pred HHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhc
Confidence 986421 4689999999999999999999999 9999999999999999 89999999999987654321 1111
Q ss_pred cCcccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCC
Q 010309 390 AGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSD 468 (513)
Q Consensus 390 ~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (513)
..+...|++||.+... ..+.++|+|++|+++++|
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------- 187 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------- 187 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------
Confidence 2277889999999877 788999999999999998
Q ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 010309 469 IPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQL 503 (513)
Q Consensus 469 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 503 (513)
..+.+++.+|++.||++||++.++++.|
T Consensus 188 -------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 2488999999999999999999998643
No 398
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=2.8e-30 Score=237.17 Aligned_cols=255 Identities=20% Similarity=0.296 Sum_probs=185.7
Q ss_pred eecccCceEEEEEEeC-CCCEEEEEEeccc--chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeC------CceEEEEee
Q 010309 232 LLGDSKTGGTYSGILP-DGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDH------GDRYIVYEF 302 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~~~lv~e~ 302 (513)
.+|.|.- .|-.+.+. .+++||+|.+... .....+...+|+.++..++|+||++++.++.-. .+.|+|||+
T Consensus 24 p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~ 102 (369)
T KOG0665|consen 24 PIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMEL 102 (369)
T ss_pred ccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHh
Confidence 3577776 55555532 5899999988654 223346788999999999999999999998644 356999999
Q ss_pred ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccc
Q 010309 303 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 303 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~ 382 (513)
| ..+|...+. -.++-..+..|+.|++.|+.|||+. +|+||||||+||++..+..+||.|||+++......
T Consensus 103 m-~~nl~~vi~------~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~ 172 (369)
T KOG0665|consen 103 M-DANLCQVIL------MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDF 172 (369)
T ss_pred h-hhHHHHHHH------HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccCccc
Confidence 9 668988885 3477889999999999999999999 99999999999999999999999999998765441
Q ss_pred cccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccc-cchhHH---------------hhh
Q 010309 383 MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVC-WQSIFE---------------WAT 446 (513)
Q Consensus 383 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~-~~~~~~---------------~~~ 446 (513)
. ......|..|.|||++.+..+.+.+||||+||++.||++|...|.+.+... |.++.+ .+.
T Consensus 173 ~---mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r 249 (369)
T KOG0665|consen 173 M---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVR 249 (369)
T ss_pred c---cCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHH
Confidence 1 111227889999999999889999999999999999999999987654321 111111 011
Q ss_pred HHh------hcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 447 PLV------QSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 447 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
... ....+.+.+...+-....+ .+.--...+.+++.+||-.||++|.|++++|+
T Consensus 250 ~yv~~~~~y~~~~f~~~fpD~~f~~~~e-~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 250 NYVENRPQYQAISFSELFPDSLFPVVLE-GSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHhhcChHhhccchhhhCCccccccccc-CCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 110 0011111111111000000 01123346889999999999999999999986
No 399
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-30 Score=255.22 Aligned_cols=190 Identities=24% Similarity=0.336 Sum_probs=162.9
Q ss_pred ceecccCceEEEEEEeCC-CCEEEEEEecccchh--------cHHHHHHHHHHHhhcC---CCcEeeeeeEEeeCCceEE
Q 010309 231 RLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQ--------RKKEFYSEIGRFARLH---HPNLVAVKGCCYDHGDRYI 298 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~l 298 (513)
+.+|+|+||.|+++.++. ...|+||.+.++..- ..-.+-.|+.||..|+ |+||++++++|++++.+||
T Consensus 567 q~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl 646 (772)
T KOG1152|consen 567 QPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYL 646 (772)
T ss_pred eeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEE
Confidence 456999999999999764 668999999765321 1123556999999997 9999999999999999999
Q ss_pred EEeec-cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccccccc
Q 010309 299 VYEFV-VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF 377 (513)
Q Consensus 299 v~e~~-~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~ 377 (513)
+||-- ++.+|.++|.. ...+++.++..|++||+.|+++||++ +|||||||-+||.++.+|-+||+|||.+..
T Consensus 647 ~te~hg~gIDLFd~IE~----kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 647 ETEVHGEGIDLFDFIEF----KPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFGSAAY 719 (772)
T ss_pred EecCCCCCcchhhhhhc----cCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeeccchhh
Confidence 99975 46689999964 45699999999999999999999999 999999999999999999999999999987
Q ss_pred CCccccccceeecCcccccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCC
Q 010309 378 VPWEVMQERTVMAGGTYGYLAPEFVYRNEL-TTKSDVYSFGVLLLEIVSGRRPAQ 431 (513)
Q Consensus 378 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvil~elltg~~p~~ 431 (513)
....... ...||..|.|||++.+.+| ...-|||++|++||.++....||.
T Consensus 720 ~ksgpfd----~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 720 TKSGPFD----VFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hcCCCcc----eeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 6554333 2339999999999999887 467899999999999999998875
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=2.2e-30 Score=257.85 Aligned_cols=246 Identities=22% Similarity=0.320 Sum_probs=198.8
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHH
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 309 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 309 (513)
..+|+|.+|.||++++. .++..|+|+++.....+..-+++|+-+++..+||||+.++|.+...+..++.||||.+|+|.
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQ 100 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQ 100 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCccc
Confidence 35699999999999964 68999999999877677788899999999999999999999999999999999999999998
Q ss_pred HHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceee
Q 010309 310 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 389 (513)
Q Consensus 310 ~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 389 (513)
+.-+ ...++++.++..+.+..+.||+|||++ +-+|||||-.|||+++.+.+|++|||.+-.+...... ...
T Consensus 101 diy~----~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitati~K--rks 171 (829)
T KOG0576|consen 101 DIYH----VTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAK--RKS 171 (829)
T ss_pred ceee----ecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhhhhh--hhc
Confidence 8664 357899999999999999999999999 9999999999999999999999999998766543222 223
Q ss_pred cCcccccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCC
Q 010309 390 AGGTYGYLAPEFVY---RNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLS 466 (513)
Q Consensus 390 ~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (513)
..||+.|||||+.. .+.|...+|||++|+...|+---.+|.....+. +.++-..+. ..++.
T Consensus 172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm--r~l~LmTkS---------~~qpp----- 235 (829)
T KOG0576|consen 172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM--RALFLMTKS---------GFQPP----- 235 (829)
T ss_pred ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH--HHHHHhhcc---------CCCCC-----
Confidence 44999999999874 467899999999999999998888886544332 111111111 11110
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 467 SDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 467 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.......-.+.+.+|++.+|..+|.+||+++.+|.
T Consensus 236 ~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 236 TLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred cccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 01112234567899999999999999999998765
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=6.6e-28 Score=225.75 Aligned_cols=196 Identities=29% Similarity=0.449 Sum_probs=168.9
Q ss_pred CceecccCceEEEEEEeCC-CCEEEEEEecccchh-cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 230 NRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQ-RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
.+.||+|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++.+......++++|++++++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 83 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGD 83 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCC
Confidence 3467999999999999865 899999999876544 56789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccce
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 387 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 387 (513)
|.+++.... ..+++..+..++.+++.+|.+||+. +++|+||+|+||+++.++.++|+|||.+......... ..
T Consensus 84 L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-~~ 156 (225)
T smart00221 84 LFDYLRKKG---GKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA-LL 156 (225)
T ss_pred HHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-cc
Confidence 999986422 1188999999999999999999999 9999999999999999999999999999876543210 11
Q ss_pred eecCccccccccccc-ccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 010309 388 VMAGGTYGYLAPEFV-YRNELTTKSDVYSFGVLLLEIVSGRRPAQA 432 (513)
Q Consensus 388 ~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlGvil~elltg~~p~~~ 432 (513)
....++..|++||.+ ....++.++|||+||+++++|++|+.||..
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 112267889999998 666778899999999999999999999965
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.4e-29 Score=224.81 Aligned_cols=248 Identities=21% Similarity=0.299 Sum_probs=183.4
Q ss_pred cCCceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhc-CCCcEeeeeeE-EeeCCceEEEEeecc
Q 010309 228 EGNRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGC-CYDHGDRYIVYEFVV 304 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~-~~~~~~~~lv~e~~~ 304 (513)
..++.||+|.||.+-++.++ ..+.+|+|.+.+. ....++|.+|...--.| .|.||+.-|++ |+..+.+++++||++
T Consensus 27 ~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP 105 (378)
T KOG1345|consen 27 TINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAP 105 (378)
T ss_pred hHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCc
Confidence 34567899999999999975 5788999999776 35678899999776666 58999998776 566677889999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEe-cC-CCCeEEecccccccCCccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL-DE-EFGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll-~~-~~~~kl~Dfg~~~~~~~~~ 382 (513)
.|+|.+-+.. ..+.+.....++.|+++||.|+|++ ++||||||.+|||| +. ..++||+|||.++......
T Consensus 106 ~gdL~snv~~-----~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV 177 (378)
T KOG1345|consen 106 RGDLRSNVEA-----AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV 177 (378)
T ss_pred cchhhhhcCc-----ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccCcee
Confidence 9999887753 4588889999999999999999999 99999999999999 33 3479999999998664332
Q ss_pred cccceeecCcccccccccccccC-----CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccc
Q 010309 383 MQERTVMAGGTYGYLAPEFVYRN-----ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLEL 457 (513)
Q Consensus 383 ~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (513)
... .-+..|.|||..... ...+.+|||.||+++|..+||++|++..... .....+|.. +.....
T Consensus 178 ~~~-----~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~-d~~Y~~~~~--w~~rk~--- 246 (378)
T KOG1345|consen 178 KYL-----EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM-DKPYWEWEQ--WLKRKN--- 246 (378)
T ss_pred hhh-----hhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc-CchHHHHHH--HhcccC---
Confidence 211 145679999977532 3467899999999999999999999843221 122222211 111111
Q ss_pred ccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 458 LDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
+.+ +.. -..+++.+.++.++-|.++|++|-...++.+.
T Consensus 247 --~~~----P~~-F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 247 --PAL----PKK-FNPFSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred --ccC----chh-hcccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 111 000 11245678899999999999999555554443
No 403
>cd03599 CLECT_DGCR2_like C-type lectin-like domain (CTLD) of the type found in DGCR2, an integral membrane protein deleted in DiGeorge Syndrome (DGS). CLECT_DGCR2_like: C-type lectin-like domain (CTLD) of the type found in DGCR2, an integral membrane protein deleted in DiGeorge Syndrome (DGS). CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. DGS is also known velo-cardio-facial syndrome (VCFS). DGS is a genetic abnormality that results in malformations of the heart, face, and limbs and is associated with schizophrenia and depressive disorders. DGCR2 is a candidate for involvement in the pathogenesis of DGS since the DGCR2 gene lies within the minimal DGS critical region (MDGRC) of 22q11, which when deleted gives rise to DGS, and the DGCR2 gene is in close proximity to the balanced translocation breakpoint in a DGS patient having a balanced translocation.
Probab=99.96 E-value=1.5e-28 Score=211.09 Aligned_cols=124 Identities=19% Similarity=0.321 Sum_probs=102.7
Q ss_pred CCCCCcccCCCC--eeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCC---------CCCeEEeee---
Q 010309 9 CPPDWIINEEKS--KCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKN---------VNGCWVGGR--- 74 (513)
Q Consensus 9 Cp~~w~~~~~~~--~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~---------~~~~WiGl~--- 74 (513)
||+||. .|++ +||+++.+.+||.+|+.+|+++||+||+|+|.+|++||.+++.+. ...+||||+
T Consensus 1 CP~gw~--~~~~~~~CYk~~~~~~tw~dA~~~C~~~Gg~Lasi~s~~e~~fl~~l~~~~~~~~~~~~~~~~~WIGL~~~~ 78 (153)
T cd03599 1 CPSGWH--HYEGTASCYKVYLSGENYWDAVQTCQKVNGSLATFTTDQELQFILAQEWDFDERVFGRKDQCKFWVGYQYVI 78 (153)
T ss_pred CCCchh--ccCCCCeEEEEeCCcCCHHHHHHHHHHcCCEEcCCCCHHHHHHHHHHHHhhcccccccccCCCEEEeecccc
Confidence 999999 7988 899999999999999999999999999999999999999998421 146999995
Q ss_pred -ecCCCCCCceEEc-CCCCCccCCcc----cCCCCCCCCCCCCCCCCcCCCceeEeec---------CCCcccccccCCC
Q 010309 75 -SINTTVGLSWKWS-DNMSKWNESIH----AVGSFNSSCTSLPCHVHATVDLCTLVSN---------GSRSLVTERCNTS 139 (513)
Q Consensus 75 -~~~~~~~~~w~W~-dg~~~~~~~~~----~~~~~~~~~~~~~c~~~~~~~~C~~~~~---------~~~~w~d~~C~~~ 139 (513)
+.+...+|.|+|+ ||+++.|.+|. +++| ++ ++|+|+.+.. ....|+|..|...
T Consensus 79 ~~~~~~~eg~w~WsddGs~~~y~~w~~~w~~geP-----------n~-~~e~C~~~~~~~~~~~~~~~~~~W~d~~C~~~ 146 (153)
T cd03599 79 TNRNHSLEGRWEVAYKGSMEVFLPPEPIFATGMS-----------TN-DNVFCAQLQCFQIPSLRERGLHSWHAENCYEK 146 (153)
T ss_pred cccCcccCCeEEEecCCccceecCccccCCCCCC-----------CC-CCCCCeEEEeeccccccccccCeeeCccCCCC
Confidence 2255678999999 59998877664 4444 22 5678888852 3357999999999
Q ss_pred CCccccc
Q 010309 140 HPFICMV 146 (513)
Q Consensus 140 ~~~iC~~ 146 (513)
.+||||+
T Consensus 147 ~~fiCq~ 153 (153)
T cd03599 147 SSFLCKR 153 (153)
T ss_pred CcceeCC
Confidence 9999984
No 404
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=1e-28 Score=235.17 Aligned_cols=267 Identities=25% Similarity=0.330 Sum_probs=193.1
Q ss_pred HHhhCcccCCceecccCceEEEEEEeC----CCCEEEEEEecccchhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCc
Q 010309 221 SITKNFSEGNRLLGDSKTGGTYSGILP----DGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGD 295 (513)
Q Consensus 221 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 295 (513)
.+.+.|...+ .||+|.|++||++.+. ..+.||+|.+...+ ....+.+|++.|..+ -+.||+++.+++...+.
T Consensus 33 ~~~~~~~~v~-kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 33 FISNAYKVVN-KIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhc-cccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 3444444444 5599999999999953 46789999997663 456689999999999 59999999999999999
Q ss_pred eEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC-CCeEEecccc
Q 010309 296 RYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE-FGAHLMGVGL 374 (513)
Q Consensus 296 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~ 374 (513)
..+|+||+++.+..++... ++...+..+++.++.||.++|.+ |||||||||.|+|.+.. +.-.|.|||+
T Consensus 110 v~ivlp~~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred eEEEecccCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechh
Confidence 9999999999999998853 77899999999999999999999 99999999999999865 4578999999
Q ss_pred cccCCccc------------------------------------------cccceeecCcccccccccccccC-CCCchh
Q 010309 375 SKFVPWEV------------------------------------------MQERTVMAGGTYGYLAPEFVYRN-ELTTKS 411 (513)
Q Consensus 375 ~~~~~~~~------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~s 411 (513)
+....... .........||++|.|||++..- .-++++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 97211000 00000112289999999999764 468899
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhh---------------H--Hhhccc---ccc------ccc-ccccC
Q 010309 412 DVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWAT---------------P--LVQSHR---YLE------LLD-PLISS 464 (513)
Q Consensus 412 DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---------------~--~~~~~~---~~~------~~~-~~~~~ 464 (513)
||||.|||++-+++++.||....... ..+.+.+. . +++... ..+ -++ ..+..
T Consensus 260 Diws~GVI~Lslls~~~PFf~a~dd~-~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~ 338 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFFKAKDDA-DALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYK 338 (418)
T ss_pred ceeeccceeehhhccccccccCcccc-chHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccc
Confidence 99999999999999999986543321 11111000 0 000000 000 000 00000
Q ss_pred -----CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 465 -----LSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 465 -----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
..........+..+.+|+.+|+..||.+|.|+++.|+
T Consensus 339 ~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 339 SRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 0011111223457899999999999999999999885
No 405
>cd03588 CLECT_CSPGs C-type lectin-like domain (CTLD) of the type found in chondroitin sulfate proteoglycan core proteins. CLECT_CSPGs: C-type lectin-like domain (CTLD) of the type found in chondroitin sulfate proteoglycan core proteins (CSPGs) in human and chicken aggrecan, frog brevican, and zebra fish dermacan. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with hyaluronan (HA). These aggregates contribute to the tissue's load bearing properties. Aggregates having other CSPGs substituting for aggrecan may contribute to the structural integrity of many different tissues. Xenopus brevican is expressed in the notochord and the brain during early embryogenesis. Zebra fish dermacan is expressed in dermal bones and may play a role in dermal bone development. CSPGs do contain LINK domain(s) which bind HA. These LINK domains are considered by one classif
Probab=99.95 E-value=1.5e-27 Score=201.54 Aligned_cols=122 Identities=23% Similarity=0.471 Sum_probs=106.5
Q ss_pred CCCCCcccCCCCeeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCCCCCeEEeeeecCCCCCCceEEcC
Q 010309 9 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKWSD 88 (513)
Q Consensus 9 Cp~~w~~~~~~~~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~~~~~WiGl~~~~~~~~~~w~W~d 88 (513)
||+||+ .|+++||+|+.+.++|.+|++.|+.+||+||+|+|.+|++||.++.. ..+||||+ +...++.|+|+|
T Consensus 1 Cp~gw~--~~~~~Cy~~~~~~~sw~~A~~~C~~~gg~La~i~s~~e~~fl~~~~~---~~~WIGl~--~~~~~~~~~W~d 73 (124)
T cd03588 1 CEEGWD--KFQGHCYRHFPDRETWEDAERRCREQQGHLSSIVTPEEQEFVNNNAQ---DYQWIGLN--DRTIEGDFRWSD 73 (124)
T ss_pred CCccce--ecCCEEEEEECCccCHHHHHHHHHhcCCEEeccCCHHHHHHHHHhcc---CcEEecce--ecCCCCceEeCC
Confidence 999999 89999999999999999999999999999999999999999998764 46899999 666779999999
Q ss_pred CCCCccCCcccCCCCCCCCCCCCCCCCcCCCceeEee-cCCCcccccccCCCCCccccc
Q 010309 89 NMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVS-NGSRSLVTERCNTSHPFICMV 146 (513)
Q Consensus 89 g~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~C~~~~-~~~~~w~d~~C~~~~~~iC~~ 146 (513)
|+++.|.+|.+++|.+. ..+.++|+.+. ...+.|++..|....+|||+.
T Consensus 74 g~~~~~~~W~~~~p~~~---------~~~~~~Cv~~~~~~~~~W~d~~C~~~~~fICe~ 123 (124)
T cd03588 74 GHPLQFENWRPNQPDNF---------FATGEDCVVMIWHEEGEWNDVPCNYHLPFTCKK 123 (124)
T ss_pred CCcccccCcCCCCCCCC---------CCCCCCeEEEecCCCCeEcCCCCCCCCeeeeeC
Confidence 99999999999988321 12345788874 345679999999999999985
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.94 E-value=5.9e-28 Score=266.57 Aligned_cols=196 Identities=21% Similarity=0.262 Sum_probs=139.6
Q ss_pred hcCC-CcEeeeeeEE-------eeCCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 010309 277 RLHH-PNLVAVKGCC-------YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH 348 (513)
Q Consensus 277 ~l~h-~nIv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ 348 (513)
.++| +||+++++++ .....+++++|++ +++|.++|.. ....+++.+++.++.||+.||+|||++ +
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---g 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN---PDRSVDAFECFHVFRQIVEIVNAAHSQ---G 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc---ccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 3455 5788888877 2334567888987 6799999963 235699999999999999999999999 9
Q ss_pred ceEcCCCCCceEecC-------------------CCCeEEecccccccCCcccc--------------ccceeecCcccc
Q 010309 349 VVHRDIRASNVLLDE-------------------EFGAHLMGVGLSKFVPWEVM--------------QERTVMAGGTYG 395 (513)
Q Consensus 349 ivH~Dikp~NIll~~-------------------~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~gt~~ 395 (513)
|+||||||+||||+. ++.+|++|||+++....... ........||+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 999999999999954 44566677777654221000 000011237888
Q ss_pred cccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHH
Q 010309 396 YLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVV 475 (513)
Q Consensus 396 y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (513)
|+|||++.+..++.++|||||||+||||++|.+|+..... ... .... ..+.+.. ....
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-----~~~---~~~~-----~~~~~~~---------~~~~ 238 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-----TMS---SLRH-----RVLPPQI---------LLNW 238 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-----HHH---HHHH-----hhcChhh---------hhcC
Confidence 9999999999999999999999999999999888643211 000 0000 0000000 0112
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 476 QKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 476 ~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
....+++.+||++||.+||++.||++
T Consensus 239 ~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 239 PKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHHHHhCCCChhhCcChHHHhh
Confidence 34678899999999999999999985
No 407
>cd03597 CLECT_attractin_like C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP). CLECT_attractin_like: C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP). CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. Mouse AtrN (the product of the mahogany gene) has been shown to bind Agouti protein and to function in agouti-induced pigmentation and obesity. Mutations in AtrN have also been shown to cause spongiform encephalopathy and hypomyelination in rats and hamsters. The cytoplasmic region of mouse ALP has been shown to binds to melanocortin receptor (MCR4). Signaling through MCR4 plays a role in appetite suppression. Attractin may have therapeutic potential in the treatment of obesity. Human attractin (hAtrN) has been shown to be expressed on activated T cells and released extracellularly. The
Probab=99.94 E-value=4.6e-27 Score=199.25 Aligned_cols=120 Identities=20% Similarity=0.356 Sum_probs=102.4
Q ss_pred CCCCCcccCCCCeeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCC-----CCCeEEeeeecCCCCCCc
Q 010309 9 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKN-----VNGCWVGGRSINTTVGLS 83 (513)
Q Consensus 9 Cp~~w~~~~~~~~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~-----~~~~WiGl~~~~~~~~~~ 83 (513)
||+||. .++++||+++...++|.+|+.+|+++||+||+|++.+|++||.+++.+. ...+||||+ |.. +|.
T Consensus 1 Cp~gw~--~~~~~Cy~~~~~~~tw~~A~~~C~~~g~~La~i~~~~E~~fi~~~~~~~~~~~~~~~~WIGl~--d~~-~g~ 75 (129)
T cd03597 1 CGEGWH--LVGNSCLKINTARESYDNAKLYCRNLNAVLASLTTQKKVEFVLKELQKHQMTKQKLTPWVGLR--KIN-VSY 75 (129)
T ss_pred CCCcCE--EcCCEEEEEEcCCCCHHHHHHHHHHcCCEEcCCCCHHHHHHHHHHHHhhcccCCCCceEEeee--cCC-CCc
Confidence 999999 7999999999999999999999999999999999999999999877542 246999999 554 588
Q ss_pred eEEcCCCCC--ccCCcccCCCCCCCCCCCCCCCCcCCCceeEeecC-CCcccccccCCC-CCccccc
Q 010309 84 WKWSDNMSK--WNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNG-SRSLVTERCNTS-HPFICMV 146 (513)
Q Consensus 84 w~W~dg~~~--~~~~~~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~-~~~w~d~~C~~~-~~~iC~~ 146 (513)
|.|+||+++ .|++|.+++|++ .++|+.+... ..+|+|..|... ..|||++
T Consensus 76 w~W~Dgs~~~~~~~~W~~geP~~-------------~~~C~~~~~~~~~~w~d~~C~~~~~~~iCe~ 129 (129)
T cd03597 76 WCWEDMSPFTNTTLQWLPGEPSD-------------AGFCGYLEEPAVSGLKANPCTNPVNGSVCER 129 (129)
T ss_pred eEECCCCCCCCccccCCCCCCCC-------------cccEEEEcccccCccccCCcCCCCcceeecC
Confidence 999999987 467899999832 1478887533 446999999998 6999974
No 408
>cd03589 CLECT_CEL-1_like C-type lectin-like domain (CTLD) of the type found in CEL-1 from Cucumaria echinata and Echinoidin from Anthocidaris crassispina. CLECT_CEL-1_like: C-type lectin-like domain (CTLD) of the type found in CEL-1 from Cucumaria echinata and Echinoidin from Anthocidaris crassispina. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. The CEL-1 CTLD binds three calcium ions and has a high specificity for N-acteylgalactosamine (GalNAc). CEL-1 exhibits strong cytotoxicity which is inhibited by GalNAc. This protein may play a role as a toxin defending against predation. Echinoidin is found in the coelomic fluid of the sea urchin and is specific for GalBeta1-3GalNAc. Echinoidin has a cell adhesive activity towards human cancer cells which is not mediated through the CTLD. Both CEL-1 and Echinoidin are multimeric proteins comprised of multiple dimers linked by disulfide bonds.
Probab=99.94 E-value=8.9e-27 Score=200.87 Aligned_cols=124 Identities=23% Similarity=0.468 Sum_probs=107.6
Q ss_pred CCCCCcccCCCCeeEEEECCCCChHHHHHHHhhc-----CCEEeeeCCHHHHHHHHHHhCCC-----CCCeEEeeeecCC
Q 010309 9 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEI-----GGHLAALTSYEEEHSAQKLCGKN-----VNGCWVGGRSINT 78 (513)
Q Consensus 9 Cp~~w~~~~~~~~Cy~~~~~~~~w~~a~~~C~~~-----~~~L~~i~~~~e~~f~~~~~~~~-----~~~~WiGl~~~~~ 78 (513)
||+||+ .|+++||+++...++|.+|+..|+.+ ||+||+|+|.+|++||.+++... ...+||||+ +.
T Consensus 1 Cp~gw~--~~~~~Cy~~~~~~~~w~~A~~~C~~~~~~g~~~~La~i~s~~e~~~l~~~~~~~~~~~~~~~~WiGl~--~~ 76 (137)
T cd03589 1 CPTFWT--AFGGYCYRFFGDRLTWEEAELRCRSFSIPGLIAHLVSIHSQEENDFVYDLFESSRGPDTPYGLWIGLH--DR 76 (137)
T ss_pred CCcchh--hhCCEEEEEeCCCcCHHHHHHHHHhhcCCCCCceEcccCCHHHHHHHHHHHhhccccCCCCcEEEeee--cC
Confidence 999999 89999999999999999999999987 69999999999999999988632 457999999 66
Q ss_pred CCCCceEEcCCCCCccCCcccCCCCCCCCCCCCCCCCcCCCceeEeecC---CCcccccccCCCCCccccc
Q 010309 79 TVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNG---SRSLVTERCNTSHPFICMV 146 (513)
Q Consensus 79 ~~~~~w~W~dg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~---~~~w~d~~C~~~~~~iC~~ 146 (513)
..++.|+|+||+++.|++|.+++|.+. .+.++|+.+... .+.|++.+|....+|||+.
T Consensus 77 ~~~~~~~W~dG~~~~~~~W~~~~P~~~----------~~~~~C~~~~~~~~~~~~W~d~~C~~~~~fIC~~ 137 (137)
T cd03589 77 TSEGPFEWTDGSPVDFTKWAGGQPDNY----------GGNEDCVQMWRRGDAGQSWNDMPCDAVFPYICKM 137 (137)
T ss_pred CccCceEeCCcCcCCcCCcCCCCCCCC----------CCCCCceeeecCCCCCCeecCCCCCCCcceeeeC
Confidence 678999999999999999999998321 245688888654 3469999999999999983
No 409
>cd03596 CLECT_tetranectin_like C-type lectin-like domain (CTLD) of the type found in the tetranectin (TN), cartilage derived C-type lectin (CLECSF1), and stem cell growth factor (SCGF). CLECT_tetranectin_like: C-type lectin-like domain (CTLD) of the type found in the tetranectin (TN), cartilage derived C-type lectin (CLECSF1), and stem cell growth factor (SCGF). CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. TN binds to plasminogen and stimulates activation of plasminogen, playing a key role in the regulation of proteolytic processes. The TN CTLD binds two calcium ions. Its calcium free form binds to various kringle-like protein ligands. Two residues involved in the coordination of calcium are critical for the binding of TN to the fourth kringle (K4) domain of plasminogen (Plg K4). TN binds the kringle 1-4 form of angiostatin (AST K1-4). AST K1-4 is a fragment of Plg, commonly found in cancer tissues. TN inhibits the bin
Probab=99.94 E-value=1e-26 Score=197.88 Aligned_cols=122 Identities=16% Similarity=0.286 Sum_probs=105.9
Q ss_pred CCCCCcccCCCCeeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCC---CCCeEEeeeecCCCCCCceE
Q 010309 9 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKN---VNGCWVGGRSINTTVGLSWK 85 (513)
Q Consensus 9 Cp~~w~~~~~~~~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~---~~~~WiGl~~~~~~~~~~w~ 85 (513)
||.||. .+++||+++.++++|.+|+..|++.||+||+|+|.+|++||.+++... ...+||||+ |...++.|+
T Consensus 1 c~~g~~---~~~~CY~~~~~~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WiGl~--~~~~~~~w~ 75 (129)
T cd03596 1 CLKGTK---IHKKCYLVSEETKHYHEASEDCIARGGTLATPRDSDENDALRDYVKASVPGNWEVWLGIN--DMVAEGKWV 75 (129)
T ss_pred CCCCcE---ECCEEEEEecccCCHHHHHHHHHhcCCeEecCCCHHHHHHHHHHHHhccCCCCcEEEecc--ccCccCeEE
Confidence 999997 789999999999999999999999999999999999999999877532 347999999 777789999
Q ss_pred EcCCCCCccCCccc---CCCCCCCCCCCCCCCCcCCCceeEeecC-CCcccccccCCCCCccccc
Q 010309 86 WSDNMSKWNESIHA---VGSFNSSCTSLPCHVHATVDLCTLVSNG-SRSLVTERCNTSHPFICMV 146 (513)
Q Consensus 86 W~dg~~~~~~~~~~---~~~~~~~~~~~~c~~~~~~~~C~~~~~~-~~~w~d~~C~~~~~~iC~~ 146 (513)
|+||+++.|++|.+ ++|+ +.+.++|+.+... .+.|++..|....+|||+.
T Consensus 76 w~dG~~~~~~~W~~~~~~~p~-----------~~~~~~Cv~l~~~~~~~W~d~~C~~~~~fICe~ 129 (129)
T cd03596 76 DVNGSPISYFNWEREITAQPD-----------GGKRENCVALSSSAQGKWFDEDCRREKPYVCEF 129 (129)
T ss_pred eCCCCCccccccCCCCCCCCC-----------CCCCCCCEEEccCCCCcCcCccCCCCCceeccC
Confidence 99999999999997 5551 2345689898654 5679999999999999974
No 410
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=1.3e-26 Score=208.93 Aligned_cols=167 Identities=23% Similarity=0.274 Sum_probs=126.1
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|+|.+++... +..+++.+++.++.|++.||+|||+. + ||+|||++.++.+|+ ||++.......
T Consensus 1 GsL~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--- 63 (176)
T smart00750 1 VSLADILEVR---GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ--- 63 (176)
T ss_pred CcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc---
Confidence 6899999642 35699999999999999999999998 6 999999999999999 99987654321
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
..||+.|+|||++.+..++.++|||||||++|||+||+.||...... ............ .. .+.
T Consensus 64 ----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~--~~~~~~~~~~~~-----~~-~~~---- 127 (176)
T smart00750 64 ----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL--SAILEILLNGMP-----AD-DPR---- 127 (176)
T ss_pred ----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh--cHHHHHHHHHhc-----cC-Ccc----
Confidence 13889999999999999999999999999999999999999654321 111111100000 00 000
Q ss_pred CCCCCcHHHHH--HHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Q 010309 466 SSDIPEAGVVQ--KVVDLVYACTQHVPSMRPRMSHVVHQLQQL 506 (513)
Q Consensus 466 ~~~~~~~~~~~--~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 506 (513)
.......... ++.+++.+||+.||.+||++.++++.+..+
T Consensus 128 -~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 128 -DRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred -ccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 0011223333 699999999999999999999999987654
No 411
>cd03590 CLECT_DC-SIGN_like C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR). CLECT_DC-SIGN_like: C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR). This group also contains proteins similar to hepatic asialoglycoprotein receptor (ASGP-R) and langerin in human. These proteins are type II membrane proteins with a CTLD ectodomain. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. DC-SIGN is thought to mediate the initial contact between dendritic cells and resting T cells, and may also mediate the rolling of DCs on epithelium. DC-SIGN and DC-SIGNR bind to oligosaccharides present on human tissues, as well as, on path
Probab=99.93 E-value=7.3e-26 Score=192.19 Aligned_cols=124 Identities=25% Similarity=0.516 Sum_probs=108.5
Q ss_pred CCCCCcccCCCCeeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCCCCCeEEeeeecCCCCCCceEEcC
Q 010309 9 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKWSD 88 (513)
Q Consensus 9 Cp~~w~~~~~~~~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~~~~~WiGl~~~~~~~~~~w~W~d 88 (513)
||.||. .|+++||+++...++|.+|+..|+.+||+||+|+|.+|++||.+++. ....+||||+ +...++.|+|+|
T Consensus 1 Cp~~w~--~~~~~Cy~~~~~~~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-~~~~~WiGl~--~~~~~~~~~W~d 75 (126)
T cd03590 1 CPTNWK--SFQSSCYFFSTEKKSWEESRQFCEDMGAHLVIINSQEEQEFISKILS-GNRSYWIGLS--DEETEGEWKWVD 75 (126)
T ss_pred CCCCce--EeCCEEEEEeCCCcCHHHHHHHHHhCCCEEEeeCCHHHHHHHHHHhC-CCCCEEEeee--cCCCcCCeEecC
Confidence 999999 79999999999999999999999999999999999999999999985 3468999999 655679999999
Q ss_pred CCCC--ccCCcccCCCCCCCCCCCCCCCCcCCCceeEeecCCCcccccccCCCCCccccc
Q 010309 89 NMSK--WNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNGSRSLVTERCNTSHPFICMV 146 (513)
Q Consensus 89 g~~~--~~~~~~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~~~~w~d~~C~~~~~~iC~~ 146 (513)
|+++ .|.+|.+++|.+... +.++|+.+....+.|.+..|....+|||+.
T Consensus 76 g~~~~~~~~~W~~~~p~~~~~---------~~~~C~~~~~~~~~w~~~~C~~~~~fiCek 126 (126)
T cd03590 76 GTPLNSSKTFWHPGEPNNWGG---------GGEDCAELVYDSGGWNDVPCNLEYRWICEK 126 (126)
T ss_pred CCCCCCccCCcCCCcCCCCCC---------CCCCCEEEECCCCcEeCcCCCCCEeeeeeC
Confidence 9998 899999988833211 356788886655689999999999999983
No 412
>PHA02642 C-type lectin-like protein; Provisional
Probab=99.93 E-value=9.4e-26 Score=200.76 Aligned_cols=123 Identities=21% Similarity=0.480 Sum_probs=104.3
Q ss_pred CCCcCCCCCCCcccCCCCeeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCCCCCeEEeeeecCCCCCC
Q 010309 3 KDWKAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNGCWVGGRSINTTVGL 82 (513)
Q Consensus 3 ~~~~~~Cp~~w~~~~~~~~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~~~~~WiGl~~~~~~~~~ 82 (513)
...+.+||.||. .|+++||+|+.+.++|.+|+..|+++||+||+|++++|++||.++.. ...+||||+ +...++
T Consensus 82 ~~k~~~CP~gW~--~~~~kCYyfs~~~ksW~eA~~~C~s~ga~La~I~seeE~~FL~~~~~--~~~yWIGLs--d~~~e~ 155 (216)
T PHA02642 82 TIKYVTCPKGWI--GFGYKCFYFSEDSKNWTFGNTFCTSLGATLVKVETEEELNFLKRYKD--SSDHWIGLN--RESSNH 155 (216)
T ss_pred CcccCCCCCcCE--EECCEEEEEeCcccCHHHHHHHHhhCCCeEeeECCHHHHHHHHHhhc--CCeEEEEeE--eCCCCC
Confidence 345789999999 89999999999999999999999999999999999999999998865 457999999 555679
Q ss_pred ceEEcCCCCCccCCcccCCCCCCCCCCCCCCCCcCCCceeEeecCCCcccccccCCCCCccccccccC
Q 010309 83 SWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNGSRSLVTERCNTSHPFICMVEHEN 150 (513)
Q Consensus 83 ~w~W~dg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~~~~w~d~~C~~~~~~iC~~~~~~ 150 (513)
.|+|+||+++.+..|..+ .++|+.+.. .++.+..|.....|||+.....
T Consensus 156 ~W~WvDGS~~n~~~~i~G-----------------~g~CAyLs~--~~i~s~~C~~~~~wIC~K~l~~ 204 (216)
T PHA02642 156 PWKWADNSNYNASFVITG-----------------TGECAYLND--IRISSSRVYANRKWICSKTYTN 204 (216)
T ss_pred ceEECCCCccCcceeccC-----------------CCceEEEeC--CceEccCcCCCceEEeeeeccc
Confidence 999999998776665322 235766644 4799999999999999986544
No 413
>cd03594 CLECT_REG-1_like C-type lectin-like domain (CTLD) of the type found in Human REG-1 (lithostathine), REG-4, and avian eggshell-specific proteins: ansocalcin, structhiocalcin-1(SCA-1), and -2(SCA-2). CLECT_REG-1_like: C-type lectin-like domain (CTLD) of the type found in Human REG-1 (lithostathine), REG-4, and avian eggshell-specific proteins: ansocalcin, structhiocalcin-1(SCA-1), and -2(SCA-2). CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. REG-1 is a proliferating factor which participates in various kinds of tissue regeneration including pancreatic beta-cell regeneration, regeneration of intestinal mucosa, regeneration of motor neurons, and perhaps in tissue regeneration of damaged heart. REG-1 may play a role on the pathophysiology of Alzheimer's disease and in the development of gastric cancers. Its expression is correlated with reduced survival from early-stage colorectal cancer. REG-1 also binds and aggregates
Probab=99.93 E-value=1e-25 Score=192.05 Aligned_cols=122 Identities=27% Similarity=0.625 Sum_probs=105.2
Q ss_pred CCCCCcccCCCCeeEEEECCCCChHHHHHHHhhc--CCEEeeeCCHHHHHHHHHHhCCC---CCCeEEeeeecCCCCCCc
Q 010309 9 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEI--GGHLAALTSYEEEHSAQKLCGKN---VNGCWVGGRSINTTVGLS 83 (513)
Q Consensus 9 Cp~~w~~~~~~~~Cy~~~~~~~~w~~a~~~C~~~--~~~L~~i~~~~e~~f~~~~~~~~---~~~~WiGl~~~~~~~~~~ 83 (513)
||+||. .|+++||+++.+.++|.+|+..|+.+ ||+||+|+|.+|++||.+++... ...+||||+ +...++.
T Consensus 1 Cp~gw~--~~~~~Cy~~~~~~~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WiGl~--~~~~~~~ 76 (129)
T cd03594 1 CPKGWL--PYKGNCYGYFRQPLSWSDAELFCQKYGPGAHLASIHSPAEAAAIASLISSYQKAYQPVWIGLH--DPQQSRG 76 (129)
T ss_pred CCCCCE--ecCCEeeeEeccCcCHHHHHHHHHhcCCCceEcccCCHHHHHHHHHHHHhhccCCccEEEeec--cCCCCCc
Confidence 999999 89999999999999999999999998 59999999999999999988542 347999999 6666689
Q ss_pred eEEcCCCCCccCCcccCCCCCCCCCCCCCCCCcCCCceeEeecCC--CcccccccCCCCCccccc
Q 010309 84 WKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNGS--RSLVTERCNTSHPFICMV 146 (513)
Q Consensus 84 w~W~dg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~~--~~w~d~~C~~~~~~iC~~ 146 (513)
|+|+||+++.|.+|.+++|. .+.++|+.+...+ ..|++..|....+|||+.
T Consensus 77 ~~W~dg~~~~~~~W~~~~p~------------~~~~~Cv~~~~~~~~~~W~~~~C~~~~~fICe~ 129 (129)
T cd03594 77 WEWSDGSKLDYRSWDRNPPY------------ARGGYCAELSRSTGFLKWNDANCEERNPFICKY 129 (129)
T ss_pred eEeCCCCcceecccCCCCCC------------CCCCCceEEEecCCCCeEECCCCCCCceeeeeC
Confidence 99999999999999988871 1245788886543 269999999999999974
No 414
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2e-26 Score=207.06 Aligned_cols=243 Identities=23% Similarity=0.432 Sum_probs=189.5
Q ss_pred ecccCceEEEEEEeCCCCEEEEEEecccc--hhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHH
Q 010309 233 LGDSKTGGTYSGILPDGSRVAVKRLKRSS--FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 310 (513)
Q Consensus 233 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 310 (513)
|.+...|+.|+|++ .|..+++|++.-.. .....+|..|.-.|+.+.||||+.+++.|..+.+..++..||+.|+|..
T Consensus 198 l~e~hsgelwrgrw-qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslyn 276 (448)
T KOG0195|consen 198 LAESHSGELWRGRW-QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYN 276 (448)
T ss_pred hccCCCcccccccc-cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHH
Confidence 57888999999999 56677888876442 2334679999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEe--cccccccCCcccccccee
Q 010309 311 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM--GVGLSKFVPWEVMQERTV 388 (513)
Q Consensus 311 ~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~--Dfg~~~~~~~~~~~~~~~ 388 (513)
.|+. ..+..++..++.+++.+++.|++|||+. .+-|.---|....|++|++.+++|+ |--++. ...
T Consensus 277 vlhe--~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsf---------qe~ 344 (448)
T KOG0195|consen 277 VLHE--QTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSF---------QEV 344 (448)
T ss_pred HHhc--CccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeee---------ecc
Confidence 9986 4455678889999999999999999997 3334445689999999999988774 222211 011
Q ss_pred ecCcccccccccccccCCCC---chhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 389 MAGGTYGYLAPEFVYRNELT---TKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 389 ~~~gt~~y~aPE~~~~~~~~---~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
...-.+.||+||.+...+-+ .++|+|||+++||||.|...||.+..+.+..- .-.+.++
T Consensus 345 gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm------------------kialegl 406 (448)
T KOG0195|consen 345 GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM------------------KIALEGL 406 (448)
T ss_pred ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh------------------hhhhccc
Confidence 11156889999999876543 57899999999999999999998876542111 0112222
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCc
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLA 507 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 507 (513)
+..+| .+.+..+.+|+.-|++.||.+||.++.|+-.|+++.
T Consensus 407 rv~ip-pgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 407 RVHIP-PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred cccCC-CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 23333 357778999999999999999999999999998764
No 415
>cd03593 CLECT_NK_receptors_like C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs). CLECT_NK_receptors_like: C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs), including proteins similar to oxidized low density lipoprotein (OxLDL) receptor (LOX-1), CD94, CD69, NKG2-A and -D, osteoclast inhibitory lectin (OCIL), dendritic cell-associated C-type lectin-1 (dectin-1), human myeloid inhibitory C-type lectin-like receptor (MICL), mast cell-associated functional antigen (MAFA), killer cell lectin-like receptors: subfamily F, member 1 (KLRF1) and subfamily B, member 1 (KLRB1), and lys49 receptors. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. NKRs are variously associated with activation or inhibition of natural killer (NK) cells. Activating NKRs stimulate cytolysis by NK cells of virally infected or transformed cells; inhibitory NKRs block cytolysis up
Probab=99.93 E-value=1.9e-25 Score=186.71 Aligned_cols=116 Identities=25% Similarity=0.551 Sum_probs=100.9
Q ss_pred CCCCCcccCCCCeeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCCCCCeEEeeeecCCCCCCceEEcC
Q 010309 9 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKWSD 88 (513)
Q Consensus 9 Cp~~w~~~~~~~~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~~~~~WiGl~~~~~~~~~~w~W~d 88 (513)
||+||+ .|+++||+++.+.++|.+|+..|+.+||+||+|+|.+|++||.+++. ...+||||+ +...++.|.|+|
T Consensus 1 Cp~gw~--~~~~~Cy~~~~~~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~--~~~~WiGl~--~~~~~~~~~W~d 74 (116)
T cd03593 1 CPKDWI--CYGNKCYYFSMEKKTWNESKEACSSKNSSLLKIDDEEELEFLQSQIG--SSSYWIGLS--REKSEKPWKWID 74 (116)
T ss_pred CCCcCE--EeCCEEEEEEcCCCCHHHHHHHHHhCCCcEEEECCHHHHHHHHHhcC--CCceEEEEe--ecCCCCCeEccC
Confidence 999999 89999999999999999999999999999999999999999999874 567999999 555679999999
Q ss_pred CCCCccCCcccCCCCCCCCCCCCCCCCcCCCceeEeecCCCcccccccCCCCCccccc
Q 010309 89 NMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNGSRSLVTERCNTSHPFICMV 146 (513)
Q Consensus 89 g~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~~~~w~d~~C~~~~~~iC~~ 146 (513)
|+++. +|..++|++ ..++|+.+... .|.+..|....+|||+.
T Consensus 75 g~~~~--~~~~~~~~~------------~~~~C~~~~~~--~w~~~~C~~~~~~IC~k 116 (116)
T cd03593 75 GSPLN--NLFNIRGST------------KSGNCAYLSST--GIYSEDCSTKKRWICEK 116 (116)
T ss_pred CCccc--ccccccCCC------------CCCCceEEcCC--cEEcccCCcCceeeeeC
Confidence 99876 676666521 34578887554 79999999999999974
No 416
>cd03598 CLECT_EMBP_like C-type lectin-like domain (CTLD) of the type found in the human proteins, eosinophil major basic protein (EMBP) and prepro major basic protein homolog (MBPH). CLECT_EMBP_like: C-type lectin-like domain (CTLD) of the type found in the human proteins, eosinophil major basic protein (EMBP) and prepro major basic protein homolog (MBPH). CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. Eosinophils and basophils carry out various functions in allergic, parasitic, and inflammatory diseases. EMBP is stored in eosinophil crystalloid granules and is released upon degranulation. EMBP is also expressed in basophils. The proform of EMBP is expressed in placental X cells and breast tissue and increases significantly during human pregnancy. EMBP has cytotoxic properties and damages bacteria and mammalian cells, in vitro, as well as, helminth parasites. EMBP deposition has been observed in the inflamed tissue of all
Probab=99.91 E-value=2.4e-24 Score=179.90 Aligned_cols=115 Identities=18% Similarity=0.395 Sum_probs=99.1
Q ss_pred CeeEEEECCCCChHHHHHHHhhc-CCEEeeeCCHHHHHHHHHHhCCC-CCCeEEeeeecCCCCCCceEEcCCCCCccCCc
Q 010309 20 SKCFGYIGNFRSWDESETYCKEI-GGHLAALTSYEEEHSAQKLCGKN-VNGCWVGGRSINTTVGLSWKWSDNMSKWNESI 97 (513)
Q Consensus 20 ~~Cy~~~~~~~~w~~a~~~C~~~-~~~L~~i~~~~e~~f~~~~~~~~-~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~~ 97 (513)
++||+|+...++|.+|+..|+.+ ||+||+|+|++|++||.+++... ...+||||++.+...++.|.|+||+++.|.+|
T Consensus 1 ~~Cy~~~~~~~t~~~A~~~C~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~WiGl~~~~~~~~~~~~W~dg~~~~y~~W 80 (117)
T cd03598 1 GRCYRFVKSPRTFRDAQVICRRCYRGNLASIHSFAFNYRVQRLVSTLNQAQVWIGGIITGKGRCRRFSWVDGSVWNYAYW 80 (117)
T ss_pred CceEEEecCCCCHHHHHHHhhcCCCceEeeecChhHhHHHHHHHhCCCCCCEEEeeEcCCCCcCCeeEeCCCCccCcCCC
Confidence 47999999999999999999995 99999999999999999998543 45799999944225679999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCcCCCceeEeecCCCcccccccCCCCCccccc
Q 010309 98 HAVGSFNSSCTSLPCHVHATVDLCTLVSNGSRSLVTERCNTSHPFICMV 146 (513)
Q Consensus 98 ~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~~~~w~d~~C~~~~~~iC~~ 146 (513)
.+++|.+ +.++|+.+....+.|++..|....+|||++
T Consensus 81 ~~g~p~~------------~~~~Cv~~~~~~g~W~~~~C~~~~~fiC~~ 117 (117)
T cd03598 81 APGQPGN------------RRGHCVELCTRGGHWRRAHCKLRRPFICSY 117 (117)
T ss_pred CCCCCCC------------CCCCcEEEeCCCCeECCCcCCCCceeeecC
Confidence 9998832 345788887656789999999999999974
No 417
>PHA02953 IEV and EEV membrane glycoprotein; Provisional
Probab=99.91 E-value=1.1e-24 Score=190.15 Aligned_cols=117 Identities=15% Similarity=0.238 Sum_probs=95.5
Q ss_pred cCCCCCCCcccCCCCeeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCCCCCeEEeeeecCCCCCCceE
Q 010309 6 KAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNGCWVGGRSINTTVGLSWK 85 (513)
Q Consensus 6 ~~~Cp~~w~~~~~~~~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~~~~~WiGl~~~~~~~~~~w~ 85 (513)
..+||+||. .|+++||+++.+.++|.+|+.+|+.+||+|++++ +|+.|+..+.. ...+||||+ | .+|.|.
T Consensus 44 ~~~CP~GW~--~~~~~CYk~f~~~~tW~~A~~~C~~~Gg~L~~~~--~e~~fv~~~~~--~~~~WIGL~--d--~eg~W~ 113 (170)
T PHA02953 44 PSACAKGWI--PYDNYCYLDTNIQLSTYGAVYLCNKYRARLPKPN--FRHLKVLSLTY--GKDFWVSLK--K--KNNRWL 113 (170)
T ss_pred cCcCcccCh--hhCCEEEEEECCcCCHHHHHHHHHhcCCCCCCCc--HHHHHHHHhcc--CCCEEEeEE--C--CCCceE
Confidence 368999999 8999999999999999999999999999998877 67888887754 446999999 6 578999
Q ss_pred EcCCC-CCccCC------cccCCCCCCCCCCCCCCCCcCCCceeEeecCCCcccccccCCCCCcccccc
Q 010309 86 WSDNM-SKWNES------IHAVGSFNSSCTSLPCHVHATVDLCTLVSNGSRSLVTERCNTSHPFICMVE 147 (513)
Q Consensus 86 W~dg~-~~~~~~------~~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~~~~w~d~~C~~~~~~iC~~~ 147 (513)
|.||+ .+.|++ |. ++| +.+.|+|+.+.. +.|+|..|....+|||+.+
T Consensus 114 w~Dggs~~~y~~~~~~~~w~-~~~------------~~~~e~C~~~~~--~~W~d~~C~~~~~fICqk~ 167 (170)
T PHA02953 114 DINTNKTVDMNKNTELKKIK-SKT------------KNDNEACYIYKS--GELKETVCNSVNYIICVKR 167 (170)
T ss_pred eCCCCeeecccccccccccc-CCC------------CCCCCCceEEeC--CeEEeccCCCCcEEEEEEe
Confidence 99975 455554 33 222 225578987754 4799999999999999864
No 418
>cd03591 CLECT_collectin_like C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1). CLECT_collectin_like: C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1). CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. The CTLDs of these collectins bind carbohydrates on surfaces (e.g. pathogens, allergens, necrotic, or apoptotic cells) and mediate functions associated with killing and phagocytosis. MBPs recognize high mannose oligosaccharides in a calcium dependent manner, bind to a broad range of pathogens, and trigger cell killing by activating the complement pathway. MBP also acts directly as an opsonin. SP-A and SP-D in addition to functioning as host defense components, a
Probab=99.91 E-value=3.3e-24 Score=178.22 Aligned_cols=114 Identities=18% Similarity=0.247 Sum_probs=100.1
Q ss_pred CeeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCCCCCeEEeeeecCCCCCCceEEcCCCCCccCCccc
Q 010309 20 SKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHA 99 (513)
Q Consensus 20 ~~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~~~~ 99 (513)
.+||+++.++++|.+|+.+|+.+||+||+|+|.+|+.||.+++......+||||+ +...++.|+|+||+++.|++|.+
T Consensus 1 ~k~y~~~~~~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~WiGl~--~~~~~~~~~w~dg~~~~y~~W~~ 78 (114)
T cd03591 1 EKIFVTNGEEKNFDDAQKLCSEAGGTLAMPRNAAENAAIASYVKKGNTYAFIGIT--DLETEGQFVYLDGGPLTYTNWKP 78 (114)
T ss_pred CcEEEeCCceeCHHHHHHHHhhcCCEEecCCCHHHHHHHHHHHhcCCccEEEecc--cCCcCCcEEeCCCCCcccCCcCC
Confidence 3799999999999999999999999999999999999999999754567999999 66678999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCcCCCceeEeecCCCcccccccCCCCCccccc
Q 010309 100 VGSFNSSCTSLPCHVHATVDLCTLVSNGSRSLVTERCNTSHPFICMV 146 (513)
Q Consensus 100 ~~~~~~~~~~~~c~~~~~~~~C~~~~~~~~~w~d~~C~~~~~~iC~~ 146 (513)
++|.+ .++.++|+.+. .++.|++.+|....+|||+.
T Consensus 79 ~ep~~----------~~~~~~Cv~~~-~~~~W~~~~C~~~~~fICe~ 114 (114)
T cd03591 79 GEPNN----------AGGGEDCVEMY-TSGKWNDVACNLTRLFVCEF 114 (114)
T ss_pred CCCCC----------CCCCCCeEEEC-CCCcCcCccCCCCeeEEeeC
Confidence 98832 12356899987 45689999999999999974
No 419
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=2.5e-23 Score=205.59 Aligned_cols=260 Identities=17% Similarity=0.174 Sum_probs=192.8
Q ss_pred ccCCceecccCceEEEEEEeCCC--CEEEEEEecccchhcHHHHHHHHHHHhhcCC----CcEeeeeeEE-eeCCceEEE
Q 010309 227 SEGNRLLGDSKTGGTYSGILPDG--SRVAVKRLKRSSFQRKKEFYSEIGRFARLHH----PNLVAVKGCC-YDHGDRYIV 299 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~nIv~l~~~~-~~~~~~~lv 299 (513)
+...+.||+|+||.||++..... ..+|+|............+..|..++..+.. +++..+++.. ......++|
T Consensus 20 ~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iV 99 (322)
T KOG1164|consen 20 YKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIV 99 (322)
T ss_pred eEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEE
Confidence 34456789999999999997553 4799998876533333367888888888863 6889999888 477788999
Q ss_pred EeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC-----CCeEEecccc
Q 010309 300 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE-----FGAHLMGVGL 374 (513)
Q Consensus 300 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~-----~~~kl~Dfg~ 374 (513)
|+.+ |.+|.++..... .+.++..+++.|+.|++.+|.+||+. |++||||||+|+++... ..+.|.|||+
T Consensus 100 M~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 100 MSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred Eecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 9998 889999876533 57799999999999999999999999 99999999999999765 3589999999
Q ss_pred cccCC--ccccc------cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhh
Q 010309 375 SKFVP--WEVMQ------ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWAT 446 (513)
Q Consensus 375 ~~~~~--~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~ 446 (513)
++... ..... .......||..|+++.+..+...+.+.|+||++.++.|++.|..|+...........+....
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~ 253 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP 253 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence 99322 22110 10122349999999999999999999999999999999999999987654321111110000
Q ss_pred HHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcC
Q 010309 447 PLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQ 508 (513)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 508 (513)
. ...... .....+.++.++...+-+.+..++|....+...|+....
T Consensus 254 ~-------~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~ 299 (322)
T KOG1164|consen 254 R-------KLLTDR---------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD 299 (322)
T ss_pred h-------hhcccc---------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence 0 000000 011123456667777777899999999999988765543
No 420
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=7e-24 Score=209.05 Aligned_cols=164 Identities=15% Similarity=0.130 Sum_probs=124.3
Q ss_pred HhhCcccCCceecccCceEEEEEEeC--CCCEEEEEEeccc-----chhcHHHHHHHHHHHhhcCCCcEee-eeeEEeeC
Q 010309 222 ITKNFSEGNRLLGDSKTGGTYSGILP--DGSRVAVKRLKRS-----SFQRKKEFYSEIGRFARLHHPNLVA-VKGCCYDH 293 (513)
Q Consensus 222 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~-l~~~~~~~ 293 (513)
+..+|. ..+.||+|+||.||+|... +++.||||++... .....+.+.+|+++|++++|+||++ +++ .
T Consensus 16 ~~~~Y~-~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----~ 90 (365)
T PRK09188 16 LSARFV-ETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----T 90 (365)
T ss_pred ccCCce-EccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----c
Confidence 334444 4567799999999999864 5778899987533 1123466899999999999999985 443 2
Q ss_pred CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCC-CCCceEecCCCCeEEecc
Q 010309 294 GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDI-RASNVLLDEEFGAHLMGV 372 (513)
Q Consensus 294 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Di-kp~NIll~~~~~~kl~Df 372 (513)
+..+|||||++|++|.. +. . .. ...++.|++.||.|||+. +|+|||| ||+|||++.++.+||+||
T Consensus 91 ~~~~LVmE~~~G~~L~~-~~---~----~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHL-AR---P----HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred CCcEEEEEccCCCCHHH-hC---c----cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEEC
Confidence 56899999999999963 21 0 11 146789999999999999 9999999 999999999999999999
Q ss_pred cccccCCccccccc------eeecCccccccccccccc
Q 010309 373 GLSKFVPWEVMQER------TVMAGGTYGYLAPEFVYR 404 (513)
Q Consensus 373 g~~~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~ 404 (513)
|+++.......... .....+++.|+|||.+..
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99997654321111 012237888999998864
No 421
>cd03603 CLECT_VCBS A bacterial subgroup of the C-type lectin-like (CTLD) domain; a subgroup of bacterial protein domains homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. CLECT_VCBS: A bacterial subgroup of the C-type lectin-like (CTLD) domain; a subgroup of bacterial protein domains homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. Many CTLDs are calcium-dependent carbohydrate binding modules; other CTLDs bind protein ligands, lipids, and inorganic surfaces including CaCO3 and ice. Bacterial CTLDs within this group are functionally uncharacterized. Animal C-type lectins are involved in such functions as extracellular matrix organization, endocytosis, complement activation, pathogen recognition, and cell-cell interactions. CTLDs may bind a variety of carbohydrate ligands including mannose, N-acetylglucosamine, galactose, N-acetylgalactosamine, and fucose. CTLDs associate with each other through several different surface
Probab=99.90 E-value=1.4e-23 Score=175.22 Aligned_cols=113 Identities=17% Similarity=0.330 Sum_probs=97.9
Q ss_pred eeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCCCCCeEEeeeecCCCCCCceEEcCCCCCccCCcccC
Q 010309 21 KCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAV 100 (513)
Q Consensus 21 ~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~~~~~ 100 (513)
+||+|+.++++|.+|+..|+++||+||+|+|++|++||.+++. ....+||||+ +...++.|+|+||+++.|.+|.++
T Consensus 1 ~~Y~~~~~~~sw~~A~~~C~~~g~~La~I~s~~E~~fv~~~~~-~~~~~WiG~~--~~~~~~~w~W~dg~~~~~~~W~~~ 77 (118)
T cd03603 1 HFYKFVDGGMTWEAAQTLAESLGGHLVTINSAEENDWLLSNFG-GYGASWIGAS--DAATEGTWKWSDGEESTYTNWGSG 77 (118)
T ss_pred CeEEEeCCCcCHHHHHHHHHHcCCEEcccCCHHHHHHHHHHhc-cCCCEEEeee--cCCCCCceEeCCCCcCCCCCcCCC
Confidence 6999999999999999999999999999999999999999986 3457999999 655679999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcCCCceeEeec---CCCcccccccC-CCCCcccc
Q 010309 101 GSFNSSCTSLPCHVHATVDLCTLVSN---GSRSLVTERCN-TSHPFICM 145 (513)
Q Consensus 101 ~~~~~~~~~~~c~~~~~~~~C~~~~~---~~~~w~d~~C~-~~~~~iC~ 145 (513)
+|.+ +..+.|+|+.+.. ..+.|+|..|. ....|||+
T Consensus 78 eP~~---------~~~~~~~Cv~~~~~~~~~~~W~d~~C~~~~~~~iCe 117 (118)
T cd03603 78 EPHN---------NGGGNEDYAAINHFPGISGKWNDLANSYNTLGYVIE 117 (118)
T ss_pred CCCC---------CCCCCcCeEEeecCCCCCCcCccCCCCccccceEEe
Confidence 8821 1234578988854 45689999999 99999996
No 422
>cd03601 CLECT_TC14_like C-type lectin-like domain (CTLD) of the type found in lectins TC14, TC14-2, TC14-3, and TC14-4 from the budding tunicate Polyandrocarpa misakiensis and PfG6 from the Acorn worm. CLECT_TC14_like: C-type lectin-like domain (CTLD) of the type found in lectins TC14, TC14-2, TC14-3, and TC14-4 from the budding tunicate Polyandrocarpa misakiensis and PfG6 from the Acorn worm. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. TC14 is homodimeric. The CTLD of TC14 binds D-galactose and D-fucose. TC14 is expressed constitutively by multipotent epithelial and mesenchymal cells and plays in role during budding, in inducing the aggregation of undifferentiated mesenchymal cells to give rise to epithelial forming tissue. TC14-2 and TC14-3 shows calcium-dependent galactose binding activity. TC14-3 is a cytostatic factor which blocks cell growth and dedifferentiation of the atrial epithelium during asexual reproducti
Probab=99.90 E-value=1.3e-23 Score=175.76 Aligned_cols=112 Identities=19% Similarity=0.311 Sum_probs=91.1
Q ss_pred EEEECCCCChHHHHHHHhhcCCEEeeeCCHHH--HHHHHHHhCCCCCCeEEeeeecCC-CCCCceEEcCCCCC--ccCCc
Q 010309 23 FGYIGNFRSWDESETYCKEIGGHLAALTSYEE--EHSAQKLCGKNVNGCWVGGRSINT-TVGLSWKWSDNMSK--WNESI 97 (513)
Q Consensus 23 y~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e--~~f~~~~~~~~~~~~WiGl~~~~~-~~~~~w~W~dg~~~--~~~~~ 97 (513)
|+|+.++++|.+|+.+|+.+||+||+|+|.+| .++|..........+||||+ |. ..+|.|+|+||+++ .|++|
T Consensus 3 ~~~~~~~~~w~~A~~~C~~~G~~La~i~s~~e~~~~~i~~~~~~~~~~~WIGl~--d~~~~~g~~~W~dG~~~~~~y~~W 80 (119)
T cd03601 3 ILCSDETMNYAKAGAFCRSRGMRLASLAMRDSEMRDAILAFTLVKGHGYWVGAD--NLQDGEYDFLWNDGVSLPTDSDLW 80 (119)
T ss_pred EEEcCCcCCHHHHHHHHHhcCCEEeeecCHHHHHHHHHHhccccCCccEEEEec--cCCCCCCCeEeCCCCCcCCCCCcc
Confidence 89999999999999999999999999999887 33333321111346999999 76 67899999999997 68999
Q ss_pred ccCCCCCCCCCCCCCCCCcCCCceeEeecCCCcccccccCCCCCccccc
Q 010309 98 HAVGSFNSSCTSLPCHVHATVDLCTLVSNGSRSLVTERCNTSHPFICMV 146 (513)
Q Consensus 98 ~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~~~~w~d~~C~~~~~~iC~~ 146 (513)
.+++|++ .++.|+|+.+....+.|+|..|....+|||+.
T Consensus 81 ~~geP~~----------~~~~e~Cv~~~~~~~~W~d~~C~~~~~fICek 119 (119)
T cd03601 81 APNEPSN----------PQSRQLCVQLWSKYNLLDDEYCGRAKRVICEK 119 (119)
T ss_pred CCCcCcC----------cCCCcCCeEEeCCCCCEeCccCCCCceeeecC
Confidence 9999832 12457899887656789999999999999974
No 423
>PHA03097 C-type lectin-like protein; Provisional
Probab=99.90 E-value=2.2e-23 Score=180.65 Aligned_cols=115 Identities=16% Similarity=0.394 Sum_probs=95.4
Q ss_pred CcCCCCCCCcccCCCCeeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCCCCCeEEeeeecCCCCCCce
Q 010309 5 WKAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNGCWVGGRSINTTVGLSW 84 (513)
Q Consensus 5 ~~~~Cp~~w~~~~~~~~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~~~~~WiGl~~~~~~~~~~w 84 (513)
....||.||. .|+++||+|+.+.++|.+|+..|+++||+||+|++++|++||.+++. ...|||||+ |.. .
T Consensus 42 ~~~~CP~gW~--~~~~~CY~~s~~~~sW~~A~~~C~~~g~~La~I~~~~E~~fi~~~~~--~~~~WIGL~--d~~--~-- 111 (157)
T PHA03097 42 SGLNCRSGWV--GYNNKCYTFSENITNKHLAIERCADMDGILTLIDDQKEVLFVSRYKG--GQDLWIGIE--KKK--G-- 111 (157)
T ss_pred cCCCCCCCce--eeCCEEEEEecCCCcHHHHHHHHHhCCCEEeeeCCHHHHHHHHHhcC--CCCEEEeee--cCC--C--
Confidence 3457999999 89999999999999999999999999999999999999999999876 457999999 543 2
Q ss_pred EEcCCCCCccCCcccCCCCCCCCCCCCCCCCcCCCceeEeecCCCcccccccCCCCCccccccc
Q 010309 85 KWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNGSRSLVTERCNTSHPFICMVEH 148 (513)
Q Consensus 85 ~W~dg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~~~~w~d~~C~~~~~~iC~~~~ 148 (513)
|+||++..+ +|+. +.++|+|+.+... .|+|..|.....|||+.+.
T Consensus 112 -W~dgs~~~~-~~~~---------------~~~~e~Cv~i~~~--~w~d~~C~~~~~~ICek~~ 156 (157)
T PHA03097 112 -DDDDREVLD-KVVK---------------PPKSGKCAYLKDK--TIISSNCNATKGWICFDRL 156 (157)
T ss_pred -ccCCCcccc-cccC---------------CCCCCCEEEEECC--cEEeCCCCCCeeEEEeecC
Confidence 999987543 3321 1235679887554 5999999999999999864
No 424
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.90 E-value=6.4e-22 Score=195.60 Aligned_cols=258 Identities=27% Similarity=0.387 Sum_probs=193.6
Q ss_pred CceecccCceEEEEEEeCCCCEEEEEEecccchh---cHHHHHHHHHHHhhcCCC-cEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQ---RKKEFYSEIGRFARLHHP-NLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||.|+||.||++... ..+++|.+...... ....+.+|+.++..+.|+ +|+++++.+......+++++++.+
T Consensus 5 ~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 82 (384)
T COG0515 5 LRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDG 82 (384)
T ss_pred EEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCC
Confidence 346799999999999986 88999999766433 367899999999999988 799999999777778999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC-CeEEecccccccCCccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF-GAHLMGVGLSKFVPWEVMQ 384 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~-~~kl~Dfg~~~~~~~~~~~ 384 (513)
++|.+++...... ..+.......++.|++.++.|+|+. +++||||||+||+++..+ .++++|||.+.........
T Consensus 83 ~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 83 GSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9999777542211 3689999999999999999999999 999999999999999988 6999999999865443322
Q ss_pred c----ceeecCccccccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCcc-ccchhHHhhhHHhhcccccc
Q 010309 385 E----RTVMAGGTYGYLAPEFVYR---NELTTKSDVYSFGVLLLEIVSGRRPAQAVDSV-CWQSIFEWATPLVQSHRYLE 456 (513)
Q Consensus 385 ~----~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlGvil~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 456 (513)
. ......++..|+|||.+.+ ..++...|+||+|++++++++|..||...... ........... ....
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~- 233 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILE----LPTP- 233 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHh----cCCc-
Confidence 1 1223348999999999987 57889999999999999999999997655431 00011111100 0000
Q ss_pred cccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 010309 457 LLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQ 502 (513)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 502 (513)
...... ..... ......+.+++..++..+|..|.+..+....
T Consensus 234 ~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 SLASPL---SPSNP-ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccccc---Ccccc-chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000 00000 2233568899999999999999998877653
No 425
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=2.4e-24 Score=226.05 Aligned_cols=256 Identities=18% Similarity=0.207 Sum_probs=187.7
Q ss_pred cccCCceecccCceEEEEEEeC-CCCEEEEEEec----cc-chh-cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEE
Q 010309 226 FSEGNRLLGDSKTGGTYSGILP-DGSRVAVKRLK----RS-SFQ-RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYI 298 (513)
Q Consensus 226 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~----~~-~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 298 (513)
+.....++|.|++|.|+..... .....+.|... .. ... ....+..|+-+-..|+|||++..+..+.+....+-
T Consensus 319 y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~ 398 (601)
T KOG0590|consen 319 YGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQ 398 (601)
T ss_pred cCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchh
Confidence 4445678899999988777643 33334444332 11 111 11226678888888999999998888877777767
Q ss_pred EEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccC
Q 010309 299 VYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 378 (513)
Q Consensus 299 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~ 378 (513)
+||||++ +|..++.. ...+...++..++.|++.|++|||+. ||.||||||+|++++.++.+||+|||.+..+
T Consensus 399 ~mE~~~~-Dlf~~~~~----~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf 470 (601)
T KOG0590|consen 399 SMEYCPY-DLFSLVMS----NGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVF 470 (601)
T ss_pred hhhcccH-HHHHHHhc----ccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceee
Confidence 7999999 99999864 24688889999999999999999999 9999999999999999999999999999876
Q ss_pred Cccccc--cceeecCcccccccccccccCCCCc-hhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccc
Q 010309 379 PWEVMQ--ERTVMAGGTYGYLAPEFVYRNELTT-KSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYL 455 (513)
Q Consensus 379 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~-~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (513)
...... .......|+..|+|||++.+..|.+ ..||||.|+++..|++|+.||........+. . .........
T Consensus 471 ~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-~----~~~~~~~~~ 545 (601)
T KOG0590|consen 471 RYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-K----TNNYSDQRN 545 (601)
T ss_pred ccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-h----hhccccccc
Confidence 544332 2233344889999999999998876 5799999999999999999997654332111 0 000000000
Q ss_pred ccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 456 ELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.. ..........+.+.+.+|.+||+.||.+|.|+++|++
T Consensus 546 ~~-------~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 546 IF-------EGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cc-------cChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00 0011122345667899999999999999999999986
No 426
>cd03592 CLECT_selectins_like C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels). CLECT_selectins_like: C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels). CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. P- E- and L-sels are cell adhesion receptors that mediate the initial attachment, tethering, and rolling of lymphocytes on inflamed vascular walls enabling subsequent lymphocyte adhesion and transmigration. L- sel is expressed constitutively on most leukocytes. P-sel is stored in the Weibel-Palade bodies of endothelial cells and in the alpha granules of platlets. E- sels are present on endothelial cells. Following platelet and/or endothelial cell activation P- sel is rapidly translocated to the cell surface and E-sel exp
Probab=99.90 E-value=2.8e-23 Score=173.04 Aligned_cols=111 Identities=19% Similarity=0.307 Sum_probs=96.1
Q ss_pred EEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCC-CCCeEEeeeecCCCCCCceEEcCCCCCccCCcccCC
Q 010309 23 FGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKN-VNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVG 101 (513)
Q Consensus 23 y~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~-~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~~~~~~ 101 (513)
|+|+.++++|.+|+.+|+.+||+||+|+|++|++||.+++... ...|||||+ +...++.|.|+||+++.|.+|.+++
T Consensus 3 Y~~~~~~~~w~~A~~~C~~~g~~La~i~s~~e~~~i~~~~~~~~~~~~WiG~~--~~~~~~~W~~~dg~~~~y~~W~~ge 80 (115)
T cd03592 3 YHYSTEKMTFNEAVKYCKSRGTDLVAIQNAEENALLNGFALKYNLGYYWIDGN--DINNEGTWVDTDKKELEYKNWAPGE 80 (115)
T ss_pred EEEcCCccCHHHHHHHHHHcCCeEeecCCHHHHHHHHHHHHhcCCCCEEEeCc--cCCccCeEEeCCCCcccccccCCCC
Confidence 8999999999999999999999999999999999999986543 347999999 6666789999999999999999998
Q ss_pred CCCCCCCCCCCCCCcCCCceeEeecC-CCcccccccCCCCCccccc
Q 010309 102 SFNSSCTSLPCHVHATVDLCTLVSNG-SRSLVTERCNTSHPFICMV 146 (513)
Q Consensus 102 ~~~~~~~~~~c~~~~~~~~C~~~~~~-~~~w~d~~C~~~~~~iC~~ 146 (513)
|.+ .+.++|+.+... .+.|++.+|....+|||++
T Consensus 81 P~~-----------~~~~~Cv~~~~~~~g~W~d~~C~~~~~fICe~ 115 (115)
T cd03592 81 PNN-----------GRNENCLEIYIKDNGKWNDEPCSKKKSAICYT 115 (115)
T ss_pred CCC-----------CCCCCceEEccCCCCCCcCcCCCCCccceeCC
Confidence 832 224678888653 5689999999999999984
No 427
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=99.89 E-value=3.5e-23 Score=235.76 Aligned_cols=135 Identities=19% Similarity=0.321 Sum_probs=113.3
Q ss_pred CCCcCCCCCCCcccCCCCeeEEEECCCCChHHHHHHHhhc-CCEEeeeCCHHHHHHHHHHhCCC-CCCeEEeeeecCCCC
Q 010309 3 KDWKAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEI-GGHLAALTSYEEEHSAQKLCGKN-VNGCWVGGRSINTTV 80 (513)
Q Consensus 3 ~~~~~~Cp~~w~~~~~~~~Cy~~~~~~~~w~~a~~~C~~~-~~~L~~i~~~~e~~f~~~~~~~~-~~~~WiGl~~~~~~~ 80 (513)
+.+...||+||...+++++||+++.+.++|.+|+..|+++ |||||+|+|.+|++||.+++... ...+||||+ |...
T Consensus 312 ~~~~~~CP~GW~~f~~~g~CYk~~~e~~TW~dAe~~C~s~GGAhLAsI~S~eEn~FL~~lv~~s~~~~vWIGLs--D~~~ 389 (2740)
T TIGR00864 312 KASHPHCPKDGEIFEENGHCFQIVPEEAAWLDAQEQCLARAGAALAIVDNDALQNFLARKVTHSLDRGVWIGFS--DVNG 389 (2740)
T ss_pred cccCCCCCCCCeecCCCCEEEEEeCCccCHHHHHHHhhccCCeEEecCCCHHHHHHHHHHhhccCCccEEEeee--CCCC
Confidence 3455789999974356899999999999999999999999 69999999999999999988643 346999999 7666
Q ss_pred CCc--eEEcCCCCC-ccCCcccCCCCCCCCCCCCCCCCcCCCceeEeecCCCcccccccCCCCCccccccccCc
Q 010309 81 GLS--WKWSDNMSK-WNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNGSRSLVTERCNTSHPFICMVEHENK 151 (513)
Q Consensus 81 ~~~--w~W~dg~~~-~~~~~~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~~~~w~d~~C~~~~~~iC~~~~~~~ 151 (513)
+|. |+|+||+++ .|.+|.+++|+ |.+.|+|+.+... +.|+|..|....+|||+.++...
T Consensus 390 EG~g~WvWsDGS~l~~YtnW~pGEPN-----------n~~~EdCV~l~~~-g~WND~~Cs~~~~FICE~~~~~~ 451 (2740)
T TIGR00864 390 AEKGPAHQGEAFEAEECEEGLAGEPH-----------PARAEHCVRLDPR-GQCNSDLCNAPHAYVCELNPGGP 451 (2740)
T ss_pred CCceeeEECCCCcccCccCcCCCCCC-----------CCCCCCCEEEcCC-CCEEccCCCCCeeEEeEECCCCc
Confidence 665 999999997 69999999983 2344789887543 56999999999999999866554
No 428
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=1.9e-22 Score=186.53 Aligned_cols=255 Identities=16% Similarity=0.211 Sum_probs=191.7
Q ss_pred CCceecccCceEEEEEE-eCCCCEEEEEEecccchhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 229 GNRLLGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
..+.||+|.||.++.|+ +-++++||||.-...+ +.-++..|.+..+.| ..++|...|-+-.++.+..||+|++ |.
T Consensus 32 VGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GP 108 (449)
T KOG1165|consen 32 VGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GP 108 (449)
T ss_pred eccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-Cc
Confidence 35566999999999999 3579999999765543 445788899888888 5789999999888998999999999 88
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC-----CeEEecccccccCCcc
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF-----GAHLMGVGLSKFVPWE 381 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~-----~~kl~Dfg~~~~~~~~ 381 (513)
||++++.- .++.++..++..++.|++.-++|+|++ .+|.|||||+|+||...+ .+.++|||+++.....
T Consensus 109 SLEDLFD~---CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 109 SLEDLFDL---CGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred CHHHHHHH---hcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 99998863 357799999999999999999999999 999999999999996433 4899999999977554
Q ss_pred ccccc-----eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccc
Q 010309 382 VMQER-----TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLE 456 (513)
Q Consensus 382 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (513)
.+... .....||.+||+--...+..-+.+-|+=|||-++.+.|-|..||++..........+.+...-....
T Consensus 183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~--- 259 (449)
T KOG1165|consen 183 KTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTP--- 259 (449)
T ss_pred cccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCC---
Confidence 33221 1223499999999998899999999999999999999999999998765433222221111000000
Q ss_pred cccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 457 LLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
......+++.++..-+.-.-..+-.+-|..+-+...+..
T Consensus 260 ----------i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~d 298 (449)
T KOG1165|consen 260 ----------IEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDD 298 (449)
T ss_pred ----------HHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 011112345566666666666677777777665554443
No 429
>smart00034 CLECT C-type lectin (CTL) or carbohydrate-recognition domain (CRD). Many of these domains function as calcium-dependent carbohydrate binding modules.
Probab=99.88 E-value=1.8e-22 Score=171.04 Aligned_cols=121 Identities=23% Similarity=0.586 Sum_probs=104.4
Q ss_pred CCCCCcccCCCCeeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCC---CCCeEEeeeecCCCCCCceE
Q 010309 9 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKN---VNGCWVGGRSINTTVGLSWK 85 (513)
Q Consensus 9 Cp~~w~~~~~~~~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~---~~~~WiGl~~~~~~~~~~w~ 85 (513)
||+||. .++++||+++....+|.+|+..|+.+||+||+|++.+|++||.+++... ...+||||+ +....+.|+
T Consensus 1 Cp~~w~--~~~~~Cy~~~~~~~~~~~A~~~C~~~~~~La~i~~~~e~~~i~~~~~~~~~~~~~~WiG~~--~~~~~~~~~ 76 (126)
T smart00034 1 CPSGWI--SYGGKCYKFSTEKKTWADAQAFCQSLGAHLASIHSEAENDFVASLLKNSGSNSDYYWIGLS--DPDSNGSWQ 76 (126)
T ss_pred CCcchh--hhCCEEEEEECCccCHHHHHHHHHhcCCEEcccCCHHHHHHHHHHHHhhcCCCCCEEEecC--ccCcCCCeE
Confidence 999999 7999999999999999999999999999999999999999999998753 568999999 445578999
Q ss_pred EcCCCC-CccCCcccCCCCCCCCCCCCCCCCcCCCceeEeecCC-CcccccccCCCCCcccc
Q 010309 86 WSDNMS-KWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNGS-RSLVTERCNTSHPFICM 145 (513)
Q Consensus 86 W~dg~~-~~~~~~~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~~-~~w~d~~C~~~~~~iC~ 145 (513)
|+||++ ..|.+|.++ + +....++|+.+.... +.|.+.+|....+|||+
T Consensus 77 W~dg~~~~~~~~w~~~-~-----------~~~~~~~C~~~~~~~~~~w~~~~C~~~~~~ICe 126 (126)
T smart00034 77 WSDGSGPVNYSNWAPG-E-----------PNGGSGDCVVLSTSGGGKWNDVSCTSKLPFVCE 126 (126)
T ss_pred ECCCCCCCCccccCCC-C-----------CCCCCCCCEEEecCCCCcccCCCCCCCcccccC
Confidence 999998 678898877 3 122445788886654 57999999999999996
No 430
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=2.3e-22 Score=178.10 Aligned_cols=200 Identities=20% Similarity=0.282 Sum_probs=163.3
Q ss_pred cCCceecccCceEEEEEE-eCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCC-CcEeeeeeEEeeCCceEEEEeeccC
Q 010309 228 EGNRLLGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHH-PNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
...+.||+|+||.+|.|. ..+|..||||+-... ....++.-|.++...|++ ..|..+..+..+.....+||+.+ |
T Consensus 18 ~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-G 94 (341)
T KOG1163|consen 18 KLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-G 94 (341)
T ss_pred EEEEeecCCchhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-C
Confidence 344567999999999999 467999999987544 234567889999999975 67888888888889999999999 8
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC---CCeEEecccccccCCccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE---FGAHLMGVGLSKFVPWEV 382 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~---~~~kl~Dfg~~~~~~~~~ 382 (513)
.+|.+++.-. .+.++..+++-++-|++.-++|+|.+ +++||||||+|.|+.-+ ..+.|+|||+|+...+..
T Consensus 95 PsLEdLfnfC---~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~ 168 (341)
T KOG1163|consen 95 PSLEDLFNFC---SRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR 168 (341)
T ss_pred ccHHHHHHHH---hhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence 8999988643 36699999999999999999999999 99999999999999643 458999999998765432
Q ss_pred cccc-----eeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCcc
Q 010309 383 MQER-----TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSV 436 (513)
Q Consensus 383 ~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~ 436 (513)
.... .....||.+|.+--...+-.-+..-|+=|+|.+|.++.-|..||++....
T Consensus 169 t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~ 227 (341)
T KOG1163|consen 169 TRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA 227 (341)
T ss_pred ccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence 2111 11223899999888777777788899999999999999999999987654
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88 E-value=2.3e-22 Score=182.50 Aligned_cols=138 Identities=17% Similarity=0.156 Sum_probs=107.9
Q ss_pred ceecccCceEEEEEEeCCCCEEEEEEecccchh--c-------H-----------------HHHHHHHHHHhhcCCCcEe
Q 010309 231 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQ--R-------K-----------------KEFYSEIGRFARLHHPNLV 284 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~E~~~l~~l~h~nIv 284 (513)
..||+|++|.||+|...+|++||||+++..... . . ....+|+..+.++.++++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 468999999999999888999999999754211 1 0 1224599999999877764
Q ss_pred eeeeEEeeCCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCceEcCCCCCceEecC
Q 010309 285 AVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFL-HDKVKPHVVHRDIRASNVLLDE 363 (513)
Q Consensus 285 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~~~~ivH~Dikp~NIll~~ 363 (513)
....+. ....+|||||+++++|...+.. ...++...+..++.|++.+|.+| |+. +|+||||||+|||++.
T Consensus 83 ~p~~~~--~~~~~iVmE~i~g~~l~~~~~~----~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~~ 153 (190)
T cd05147 83 CPEPIL--LKSHVLVMEFIGDDGWAAPRLK----DAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYHD 153 (190)
T ss_pred CCcEEE--ecCCEEEEEEeCCCCCcchhhh----cCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEEC
Confidence 433322 2234899999998877654321 24688999999999999999999 688 9999999999999984
Q ss_pred CCCeEEecccccccC
Q 010309 364 EFGAHLMGVGLSKFV 378 (513)
Q Consensus 364 ~~~~kl~Dfg~~~~~ 378 (513)
+.++|+|||++...
T Consensus 154 -~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 -GKLYIIDVSQSVEH 167 (190)
T ss_pred -CcEEEEEccccccC
Confidence 68999999999754
No 432
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.88 E-value=2.6e-23 Score=218.14 Aligned_cols=249 Identities=21% Similarity=0.233 Sum_probs=179.6
Q ss_pred CceecccCceEEEEEEeCCCCEEEEEEecccc-hhcHHHH---HHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 230 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSS-FQRKKEF---YSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~---~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
.+.||++.|=.|.++++++|. |+||++-+.. .-....+ ..|++ ...++|||.+++.-+.......|||-+|..
T Consensus 28 ~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvk- 104 (1431)
T KOG1240|consen 28 VENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVK- 104 (1431)
T ss_pred ecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHh-
Confidence 345799999999999998887 9999986553 2233334 34444 555699999999888778888899999994
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccC--Ccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV--PWEVM 383 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~--~~~~~ 383 (513)
.+|.+.|.. +.-+...+.+-|+.|++.||.-+|.. ||+|||||.+||||++-+-+.|+||..-+.. +.+..
T Consensus 105 hnLyDRlST----RPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 105 HNLYDRLST----RPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred hhhhhhhcc----chHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 489888853 34577778888999999999999999 9999999999999999988999999876532 22222
Q ss_pred cccee---ecCccccccccccccc----------CC-CCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHH
Q 010309 384 QERTV---MAGGTYGYLAPEFVYR----------NE-LTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPL 448 (513)
Q Consensus 384 ~~~~~---~~~gt~~y~aPE~~~~----------~~-~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 448 (513)
..... ....-..|+|||.+.. .+ .+++.||||+||++.||++ |++||.- .++..+...-
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L------SQL~aYr~~~ 251 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL------SQLLAYRSGN 251 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH------HHHHhHhccC
Confidence 22111 1113357999998753 12 5788999999999999998 6888753 2222221110
Q ss_pred hhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCcC
Q 010309 449 VQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAQ 508 (513)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 508 (513)
. ......+ ..+. ...+++++..|++.||++|.++++.|+.-..+.-
T Consensus 252 --~----~~~e~~L----e~Ie----d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~F 297 (1431)
T KOG1240|consen 252 --A----DDPEQLL----EKIE----DVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLVF 297 (1431)
T ss_pred --c----cCHHHHH----HhCc----CccHHHHHHHHHccCchhccCHHHHHHhhhcccc
Confidence 0 0011111 0111 1248899999999999999999999998665543
No 433
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.88 E-value=2.1e-22 Score=184.69 Aligned_cols=175 Identities=10% Similarity=0.109 Sum_probs=135.2
Q ss_pred HHHHhhCcccCCceecccCceEEEEEEeCCCCEEEEEEecccchhcHH---------HHHHHHHHHhhcCCCcEeeeeeE
Q 010309 219 LRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKK---------EFYSEIGRFARLHHPNLVAVKGC 289 (513)
Q Consensus 219 l~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~---------~~~~E~~~l~~l~h~nIv~l~~~ 289 (513)
+..+..+-+...++||.|+||.||+... ++..+|||++......... .+.+|+..+.+++||+|..+.++
T Consensus 25 ~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~ 103 (232)
T PRK10359 25 FDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF 103 (232)
T ss_pred HHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence 4455666667778999999999999766 6779999999765332222 26889999999999999999888
Q ss_pred EeeC--------CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEe
Q 010309 290 CYDH--------GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL 361 (513)
Q Consensus 290 ~~~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll 361 (513)
+... +..+|||||++|.+|.++.. +++ ....+++.+|..+|+. |++||||||+||++
T Consensus 104 ~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili 168 (232)
T PRK10359 104 YLLAERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIV 168 (232)
T ss_pred eeecccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEE
Confidence 6643 35789999999999988642 222 2456999999999999 99999999999999
Q ss_pred cCCCCeEEecccccccCCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHH
Q 010309 362 DEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIV 424 (513)
Q Consensus 362 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell 424 (513)
+.++ ++|+|||............ .++....+..++|+||||+++..+.
T Consensus 169 ~~~g-i~liDfg~~~~~~e~~a~d--------------~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 169 SKNG-LRIIDLSGKRCTAQRKAKD--------------RIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred eCCC-EEEEECCCcccccchhhHH--------------HHHHHhHhcccccccceeEeehHHH
Confidence 9988 9999999887553221111 1334455667899999999887654
No 434
>cd03602 CLECT_1 C-type lectin (CTL)/C-type lectin-like (CTLD) domain subgroup 1; a subgroup of protein domains homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. CLECT_1: C-type lectin (CTL)/C-type lectin-like (CTLD) domain subgroup 1; a subgroup of protein domains homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. Many CTLDs are calcium-dependent carbohydrate binding modules; other CTLDs bind protein ligands, lipids, and inorganic surfaces including CaCO3 and ice. Animal C-type lectins are involved in such functions as extracellular matrix organization, endocytosis, complement activation, pathogen recognition, and cell-cell interactions. CTLDs may bind a variety of carbohydrate ligands including mannose, N-acetylglucosamine, galactose, N-acetylgalactosamine, and fucose. CTLDs associate with each other through several different surfaces to form dimers, trimers, or tetramers from which ligand-binding sites project in differe
Probab=99.87 E-value=3.3e-22 Score=164.57 Aligned_cols=108 Identities=22% Similarity=0.480 Sum_probs=93.7
Q ss_pred eeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCCCCCeEEeeeecCCCCCCceEEcCCCCCccCCcccC
Q 010309 21 KCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAV 100 (513)
Q Consensus 21 ~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~~~~~ 100 (513)
.||+++.++++|.+|+.+|+.+||+||+|+|.+|++||.+++......+||||+ +. ++.|.|+||++..|.+|.++
T Consensus 1 ~~y~~~~~~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~WiGl~--~~--~~~~~W~dg~~~~~~~w~~~ 76 (108)
T cd03602 1 RTFYLVNESKTWSEAQQYCRENYTDLATVQNQEDNALLSNLSRVSNSAAWIGLY--RD--VDSWRWSDGSESSFRNWNTF 76 (108)
T ss_pred CceEEeccccCHHHHHHHHHHHCCccCeecCHHHHHHHHHHHhccCCcEEEEEE--CC--CCceEEcCCCCCccCccCCC
Confidence 489999999999999999999999999999999999999998533568999999 43 68999999999999999887
Q ss_pred CCCCCCCCCCCCCCCcCCCceeEeecCCCcccccccCCCCCccccc
Q 010309 101 GSFNSSCTSLPCHVHATVDLCTLVSNGSRSLVTERCNTSHPFICMV 146 (513)
Q Consensus 101 ~~~~~~~~~~~c~~~~~~~~C~~~~~~~~~w~d~~C~~~~~~iC~~ 146 (513)
+|. ..++|+.+... +.|++..|....+|||+.
T Consensus 77 ~~~-------------~~~~C~~~~~~-~~w~~~~C~~~~~fIC~~ 108 (108)
T cd03602 77 QPF-------------GQGDCATMYSS-GRWYAALCSALKPFICYD 108 (108)
T ss_pred CCC-------------CCCCeeEECcC-CeECcccCCCCcCEeccC
Confidence 641 23578888654 689999999999999973
No 435
>cd03595 CLECT_chondrolectin_like C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin. CLECT_chondrolectin_like: C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. CHODL is predominantly expressed in muscle cells and is associated with T-cell maturation. Various alternatively spliced isoforms have been of CHODL have been identified. The transmembrane form of CHODL is localized in the ER-Golgi apparatus. Layilin is widely expressed in different cell types. The extracellular CTLD of layilin binds hyaluronan (HA), a major constituent of the extracellular matrix (ECM). The cytoplasmic tail of layilin binds various members of the band 4.1/ERM superfamily (talin, radixin, and merlin). The ERM proteins are cytoskeleton-membrane l
Probab=99.87 E-value=5.9e-22 Score=172.41 Aligned_cols=116 Identities=17% Similarity=0.348 Sum_probs=95.3
Q ss_pred CCCCeeEEEE-----CCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCC---CCCeEEeeeecCCCC--------
Q 010309 17 EEKSKCFGYI-----GNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKN---VNGCWVGGRSINTTV-------- 80 (513)
Q Consensus 17 ~~~~~Cy~~~-----~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~---~~~~WiGl~~~~~~~-------- 80 (513)
.|+++||+++ ..+++|.+|+..|+.+||+||+|+|++|++||.+++... ...+||||+ +...
T Consensus 7 ~~~~~Cy~~~~~~~~~~~~tw~~A~~~C~~~g~~LasI~s~~E~~~i~~~i~~~~~~~~~~WIGl~--~~~~~~~~~~~~ 84 (149)
T cd03595 7 GTEKPCYKIAYFQDSRRRLNFEEARQACREDGGELLSIESENEQKLIERFIQTLRASDGDFWIGLR--RSSQYNVTSSAC 84 (149)
T ss_pred CCCCccEEEEEEeccccccCHHHHHHHHHHcCCEECccCCHHHHHHHHHHHHhhcCCCCcEEEEeE--CCCCcccccccc
Confidence 3569999864 789999999999999999999999999999999887532 457999999 4433
Q ss_pred CCceEEcCCCCCccCCcccCCCCCCCCCCCCCCCCcCCCceeEeecC-----------CCcccccccCCCCCccccc
Q 010309 81 GLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNG-----------SRSLVTERCNTSHPFICMV 146 (513)
Q Consensus 81 ~~~w~W~dg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~-----------~~~w~d~~C~~~~~~iC~~ 146 (513)
++.|.|+||+++.|.+|.+++|.+ +.++|+.+... ...|+|..|....+|||+.
T Consensus 85 ~~~~~W~dG~~~~y~~W~~~eP~~------------~~~~Cv~l~~~~~~~~~~~~~~~~~W~d~~C~~~~~fICe~ 149 (149)
T cd03595 85 SSLYYWLDGSISTFRNWYVDEPSC------------GSEVCVVMYHQPSAPAGQGGPYLFQWNDDNCNMKNNFICKY 149 (149)
T ss_pred CCccEEcCCCccCccCCCCCCCCC------------cccCCEEEEecCCCCcCcCcccCCCccCCCCCCCcccccCC
Confidence 256999999999999999998832 34578877532 2369999999999999974
No 436
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.86 E-value=4.8e-21 Score=174.49 Aligned_cols=139 Identities=17% Similarity=0.169 Sum_probs=110.5
Q ss_pred ceecccCceEEEEEEeCCCCEEEEEEecccchh--c------------------------HHHHHHHHHHHhhcCCCcEe
Q 010309 231 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQ--R------------------------KKEFYSEIGRFARLHHPNLV 284 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~h~nIv 284 (513)
+.||+|++|.||+|...+|+.||||+++..... . ...+..|...+.++.|++|.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999878999999999764211 0 12235789999999999875
Q ss_pred eeeeEEeeCCceEEEEeeccCCCHHHH-hccCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCceEcCCCCCceEec
Q 010309 285 AVKGCCYDHGDRYIVYEFVVNGPLDRW-LHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD-KVKPHVVHRDIRASNVLLD 362 (513)
Q Consensus 285 ~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dikp~NIll~ 362 (513)
....+... ..+|||||++++++... +. ...++......++.|++.+|.+||+ . ||+||||||+|||++
T Consensus 83 ~p~~~~~~--~~~lVmE~~~g~~~~~~~l~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 83 VPEPILLK--KNVLVMEFIGDDGSPAPRLK-----DVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CceEEEec--CCEEEEEEecCCCchhhhhh-----hccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 44443332 34899999988865433 32 2457788999999999999999999 8 999999999999999
Q ss_pred CCCCeEEecccccccCCc
Q 010309 363 EEFGAHLMGVGLSKFVPW 380 (513)
Q Consensus 363 ~~~~~kl~Dfg~~~~~~~ 380 (513)
++.++|+|||++.....
T Consensus 153 -~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 -DGKPYIIDVSQAVELDH 169 (190)
T ss_pred -CCCEEEEEcccceecCC
Confidence 78999999999986643
No 437
>cd03600 CLECT_thrombomodulin_like C-type lectin-like domain (CTLD) of the type found in human thrombomodulin(TM), Endosialin, C14orf27, and C1qR. CLECT_thrombomodulin_like: C-type lectin-like domain (CTLD) of the type found in human thrombomodulin(TM), Endosialin, C14orf27, and C1qR. CTLD refers to a domain homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. In these thrombomodulin-like proteins the residues involved in coordinating Ca2+ in the classical MBP-A CTLD are not conserved. TM exerts anti-fibrinolytic and anti-inflammatory activity. TM also regulates blood coagulation in the anticoagulant protein C pathway. In this pathway, the procoagulant properties of thrombin (T) are lost when it binds TM. TM also plays a key role in tumor biology. It is expressed on endothelial cells and on several type of tumor cell including squamous cell carcinoma. Loss of TM expression correlates with advanced stage and poor prognosis. Loss of function of TM func
Probab=99.86 E-value=3.9e-21 Score=166.07 Aligned_cols=118 Identities=18% Similarity=0.303 Sum_probs=94.5
Q ss_pred CCCeeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCC-------CCCeEEeeeecCC------CCCCce
Q 010309 18 EKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKN-------VNGCWVGGRSINT------TVGLSW 84 (513)
Q Consensus 18 ~~~~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~-------~~~~WiGl~~~~~------~~~~~w 84 (513)
.+++||+++...++|.+|+.+|+.+||+||+|+|.+|++||..++... ...+||||++... ..++.|
T Consensus 2 ~~~~Cy~~~~~~~sw~~A~~~C~~~gg~La~i~s~~E~~~v~~~l~~~~~~~~~~~~~~WIGl~~~~~~~~~~~~~~~~f 81 (141)
T cd03600 2 VSDACYTLHPQKLTFLEAQRSCIELGGNLATVRSGEEADVVSLLLAAGPGRHGRGSLRLWIGLQREPRQCSDPSLPLRGF 81 (141)
T ss_pred CCCceEEEeCCccCHHHHHHHHHhhCCEeeecCCHHHHHHHHHHHhhccccccCCCccEEEeEecCcccCccccccCCcc
Confidence 367899999999999999999999999999999999999999988643 3479999994211 234789
Q ss_pred EEcCCCC-CccCCcccCCCCCCCCCCCCCCCCcCCCceeEeecCC-----CcccccccCCC-CCccccc
Q 010309 85 KWSDNMS-KWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNGS-----RSLVTERCNTS-HPFICMV 146 (513)
Q Consensus 85 ~W~dg~~-~~~~~~~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~~-----~~w~d~~C~~~-~~~iC~~ 146 (513)
.|+||++ ..|++|.++ |+ +.+ +.++|+.+.... ..|+|.+|... ..|||+.
T Consensus 82 ~W~d~~~~~~y~~W~~~-p~-n~~---------~~~~Cv~l~~~~~~~~~~~W~d~~C~~~~~~fIC~~ 139 (141)
T cd03600 82 SWVTGDQDTDFSNWLQE-PA-GTC---------TSPRCVALSAAGSTPDNLKWKDGPCSARADGYLCKF 139 (141)
T ss_pred EECCCCCCCCccccccC-CC-CCC---------CCCccEEEEccCCCCCCCccccCCcCCCCCCeEEee
Confidence 9999865 578899887 52 222 346788886543 46999999998 4799986
No 438
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.85 E-value=5.1e-21 Score=180.81 Aligned_cols=231 Identities=18% Similarity=0.183 Sum_probs=148.0
Q ss_pred CCceecccCceEEEEEEeCC-CCEEEEEEecccc---hhcHHHHHHHHHHHhhcCC----------CcEeeeeeEEee--
Q 010309 229 GNRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSS---FQRKKEFYSEIGRFARLHH----------PNLVAVKGCCYD-- 292 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h----------~nIv~l~~~~~~-- 292 (513)
...+||.|+++.||.+++.+ |+++|||++.... ....+++.+|.-....+.+ -.++..++...-
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 35678999999999999864 8999999985432 2234666666655544322 122222222211
Q ss_pred -------C---C-----ceEEEEeeccCCCHHHHhcc---CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCC
Q 010309 293 -------H---G-----DRYIVYEFVVNGPLDRWLHH---IPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDI 354 (513)
Q Consensus 293 -------~---~-----~~~lv~e~~~~gsL~~~l~~---~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Di 354 (513)
. + ..+++|+-+ .+||.+++.. .......+....++.+..|+++.+++||+. |++|+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-
T ss_pred CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEeccc
Confidence 1 1 236788877 6688887542 222223344555677789999999999999 9999999
Q ss_pred CCCceEecCCCCeEEecccccccCCccccccceeecCcccccccccccccC--------CCCchhhHHHHHHHHHHHHcC
Q 010309 355 RASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRN--------ELTTKSDVYSFGVLLLEIVSG 426 (513)
Q Consensus 355 kp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~sDvwSlGvil~elltg 426 (513)
+|+|+|++.+|.+.|+||+........... ...+..|.|||..... .++.+.|.|+||+++|.|++|
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRC-----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEEG-----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceeec-----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 999999999999999999887765433221 1255779999977432 468899999999999999999
Q ss_pred CCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCC
Q 010309 427 RRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMR 493 (513)
Q Consensus 427 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 493 (513)
..||........... .. ... . +.++.+..||..+|+.||.+|
T Consensus 247 ~lPf~~~~~~~~~~~-------------------~f----~~C-~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADPEW-------------------DF----SRC-R-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTSGG-------------------GG----TTS-S----HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccccc-------------------cc----hhc-C-CcCHHHHHHHHHHccCCcccC
Confidence 999986543211100 11 111 2 677889999999999999988
No 439
>PHA02867 C-type lectin protein; Provisional
Probab=99.85 E-value=2.9e-21 Score=165.93 Aligned_cols=114 Identities=18% Similarity=0.403 Sum_probs=91.9
Q ss_pred CCcCCCCCCCcccCCCCeeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCCCCCeEEeeeecCCCCCCc
Q 010309 4 DWKAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNGCWVGGRSINTTVGLS 83 (513)
Q Consensus 4 ~~~~~Cp~~w~~~~~~~~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~~~~~WiGl~~~~~~~~~~ 83 (513)
..+++||.||. .|+++||+|+.+.++|.+|+..|..+||+||+|++++|++||.++.. ..|||||+ +.. .
T Consensus 44 ~~~~~CP~gWi--~~~~~CY~fs~~~~tW~~A~~~C~~~ga~La~I~s~eE~~Fl~~~~~---~~~WIGLs--~~~---~ 113 (167)
T PHA02867 44 YFSKVCPDEWI--GYNSKCYYFTINETNWNDSKKLCDVMDSSLIRFDNIETLNFVSRYGK---GSYWIDIN--QNR---K 113 (167)
T ss_pred CcCCCCCCCCE--EECCEEEEEeccccCHHHHHHHHhhCCCEECCcCCHHHHHHHHHcCC---CCEEEEEE--eCC---C
Confidence 45789999999 89999999999999999999999999999999999999999998754 47999999 432 3
Q ss_pred eEEcCCCCCccCCcccCCCCCCCCCCCCCCCCcCCCceeEeecCCCcccccccCCCCCcccccccc
Q 010309 84 WKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNGSRSLVTERCNTSHPFICMVEHE 149 (513)
Q Consensus 84 w~W~dg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~~~~w~d~~C~~~~~~iC~~~~~ 149 (513)
|.|.+++.. . +. .+.++|+.+..+ ...+.+|.....+||+.+..
T Consensus 114 ~~~~~~s~~-----~-~~--------------~~~~~Ca~i~~~--~i~s~~C~~~~~wIC~K~~~ 157 (167)
T PHA02867 114 IPGINFSLY-----Y-EQ--------------GVNDICLLFDTS--NIIEMSCIFHERTICVKEDR 157 (167)
T ss_pred CCCccCcee-----e-ec--------------CCCCcEEEEeCC--eEEeecccCCcEEEEEccCc
Confidence 455554332 1 11 133467777554 79999999999999998754
No 440
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.84 E-value=7e-21 Score=191.04 Aligned_cols=217 Identities=23% Similarity=0.382 Sum_probs=164.0
Q ss_pred HhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCc-eEcC
Q 010309 275 FARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHV-VHRD 353 (513)
Q Consensus 275 l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i-vH~D 353 (513)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ....+++.....++++++.||+|||+. +| .|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeee
Confidence 4578999999999999999999999999999999999975 346689999999999999999999987 55 9999
Q ss_pred CCCCceEecCCCCeEEecccccccCCccccccceeecCcccccccccccccC-------CCCchhhHHHHHHHHHHHHcC
Q 010309 354 IRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRN-------ELTTKSDVYSFGVLLLEIVSG 426 (513)
Q Consensus 354 ikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwSlGvil~elltg 426 (513)
+++.|.++|....+||+|||+.................-..-|.|||.+... ..+.+.||||||++++|+++.
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred eccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 9999999999999999999999877531111111111134569999998763 146779999999999999999
Q ss_pred CCCCCCCCcccc-chhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Q 010309 427 RRPAQAVDSVCW-QSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQ 505 (513)
Q Consensus 427 ~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 505 (513)
..||........ ..++.... . .....+.|.+.. .....+++..++..||..+|.+||++++|-..++.
T Consensus 155 ~~~~~~~~~~~~~~eii~~~~---~--~~~~~~rP~i~~------~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~ 223 (484)
T KOG1023|consen 155 SGPFDLRNLVEDPDEIILRVK---K--GGSNPFRPSIEL------LNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLT 223 (484)
T ss_pred cCccccccccCChHHHHHHHH---h--cCCCCcCcchhh------hhhcchHHHHHHHHhcccChhhCccHHHHHhhhhh
Confidence 999976433211 11111111 1 111222222211 11344579999999999999999999999998876
Q ss_pred CcC
Q 010309 506 LAQ 508 (513)
Q Consensus 506 ~~~ 508 (513)
+..
T Consensus 224 ~~~ 226 (484)
T KOG1023|consen 224 INK 226 (484)
T ss_pred hcc
Confidence 654
No 441
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.84 E-value=2.6e-22 Score=201.08 Aligned_cols=230 Identities=26% Similarity=0.278 Sum_probs=183.5
Q ss_pred ecccCceEEEEEE----eCCCCEEEEEEecccchhc--HHHHHHHHHHHhhcC-CCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 233 LGDSKTGGTYSGI----LPDGSRVAVKRLKRSSFQR--KKEFYSEIGRFARLH-HPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 233 lg~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
+|+|+||.|++.. .+.|..+|+|++++..... ......|-.++...+ ||.++++...+..+...++++++..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 6999999999866 3357889999987653222 124456777888886 99999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcccccc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 385 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 385 (513)
|.|...+.+ ...+.+.....+...++.+++++|.. +|+|||+|++||+++.+|++++.|||+++..-.....
T Consensus 82 g~lft~l~~----~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~- 153 (612)
T KOG0603|consen 82 GDLFTRLSK----EVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA- 153 (612)
T ss_pred chhhhcccc----CCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc-
Confidence 999887743 35577788888899999999999999 9999999999999999999999999999876443322
Q ss_pred ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCC
Q 010309 386 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSL 465 (513)
Q Consensus 386 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (513)
+||..|||||++. .....+|-||||++++||+||..||.... ... ++..
T Consensus 154 -----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~----------~~~---------Il~~----- 202 (612)
T KOG0603|consen 154 -----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDT----------MKR---------ILKA----- 202 (612)
T ss_pred -----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHH----------HHH---------Hhhh-----
Confidence 5899999999997 56788999999999999999999998610 000 0000
Q ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHH
Q 010309 466 SSDIPEAGVVQKVVDLVYACTQHVPSMRPRM--SHVVHQ 502 (513)
Q Consensus 466 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl~~ 502 (513)
....+...+..+.+++..++..+|..|.-. ..+.+.
T Consensus 203 -~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~ei 240 (612)
T KOG0603|consen 203 -ELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEI 240 (612)
T ss_pred -ccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHH
Confidence 122355677889999999999999999754 344443
No 442
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=3.8e-20 Score=166.13 Aligned_cols=186 Identities=12% Similarity=0.005 Sum_probs=139.1
Q ss_pred CceecccCceEEEEEEeCCCCEEEEEEecccchhc----HHHHHHHHHHHhhcC-CCcEeeeeeEEeeCCceEEEEeecc
Q 010309 230 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQR----KKEFYSEIGRFARLH-HPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
...|++|+||+||.+.. .+.+++.+.+.....-. ...+.+|+++|++|. |++|++++++ +..+++|||+.
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~ 81 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA 81 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence 34689999999997776 78889988887653311 235789999999995 5889999886 45699999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCC-CCCceEecCCCCeEEecccccccCCcccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDI-RASNVLLDEEFGAHLMGVGLSKFVPWEVM 383 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Di-kp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 383 (513)
|.+|...+.. ....++.|++.+|.++|+. ||+|||| ||+|||++.++.++|+|||++........
T Consensus 82 G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 82 GAAMYQRPPR-----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred CccHHhhhhh-----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 9998654311 1135788999999999999 9999999 79999999999999999999986543321
Q ss_pred c----c-------ceeecCcccccccccccccC-CCC-chhhHHHHHHHHHHHHcCCCCCCCCC
Q 010309 384 Q----E-------RTVMAGGTYGYLAPEFVYRN-ELT-TKSDVYSFGVLLLEIVSGRRPAQAVD 434 (513)
Q Consensus 384 ~----~-------~~~~~~gt~~y~aPE~~~~~-~~~-~~sDvwSlGvil~elltg~~p~~~~~ 434 (513)
. . .......++.|++|+...-. ..+ ...+-++.|.-+|.++|+..+.....
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 0 0 00011156677777744322 233 56789999999999999998875543
No 443
>PRK10345 hypothetical protein; Provisional
Probab=99.83 E-value=5.5e-20 Score=168.37 Aligned_cols=134 Identities=17% Similarity=0.240 Sum_probs=106.0
Q ss_pred CceecccCceEEEEEEeC-CCCEEEEEEecccchhcHHHHHHHHHHHhhc-----CCCcEeeeeeEEeeCC---ceE-EE
Q 010309 230 NRLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-----HHPNLVAVKGCCYDHG---DRY-IV 299 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~nIv~l~~~~~~~~---~~~-lv 299 (513)
.++||+|++|.||. ++ ++.. +||++........+.+.+|+.+++.+ .||||++++|+++++. ..+ +|
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 45789999999996 43 4444 79998765445567899999999999 5799999999998874 323 78
Q ss_pred Eee--ccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHH-HHHhcCCCCCceEcCCCCCceEecC----CCCeEEecc
Q 010309 300 YEF--VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI-AFLHDKVKPHVVHRDIRASNVLLDE----EFGAHLMGV 372 (513)
Q Consensus 300 ~e~--~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L-~~LH~~~~~~ivH~Dikp~NIll~~----~~~~kl~Df 372 (513)
+|| +.+++|.+++.+ ..+++. ..++.|++.++ +|||++ +|+||||||+|||++. +..++|+||
T Consensus 84 ~e~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred ecCCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 999 557999999964 235555 35678888787 999999 9999999999999974 347999995
Q ss_pred cccc
Q 010309 373 GLSK 376 (513)
Q Consensus 373 g~~~ 376 (513)
+.+.
T Consensus 154 ~G~~ 157 (210)
T PRK10345 154 IGES 157 (210)
T ss_pred CCCc
Confidence 5443
No 444
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.81 E-value=1.1e-19 Score=172.13 Aligned_cols=197 Identities=23% Similarity=0.328 Sum_probs=141.0
Q ss_pred CCCcEeeeeeEEeeC---------------------------CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHH
Q 010309 279 HHPNLVAVKGCCYDH---------------------------GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVA 331 (513)
Q Consensus 279 ~h~nIv~l~~~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~ 331 (513)
+|||||++.+.|.+. ...|+||..++ .+|.+++-. ...+.....-++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~-----~~~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT-----RHRSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc-----CCCchHHHHHHH
Confidence 599999999887642 23489999884 589999964 446677788899
Q ss_pred HHHHHHHHHHhcCCCCCceEcCCCCCceEe--cCCC--CeEEecccccccCCcc----ccccceeecCcccccccccccc
Q 010309 332 TTLAQGIAFLHDKVKPHVVHRDIRASNVLL--DEEF--GAHLMGVGLSKFVPWE----VMQERTVMAGGTYGYLAPEFVY 403 (513)
Q Consensus 332 ~qi~~~L~~LH~~~~~~ivH~Dikp~NIll--~~~~--~~kl~Dfg~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~ 403 (513)
.|+++|+.|||.+ ||.|||+|++|||+ |+|. .+.|+|||++-.-+.. ..........|...-||||+..
T Consensus 348 aQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 348 AQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 9999999999999 99999999999999 3443 3689999987543321 1112222344788899999986
Q ss_pred cCC--C----CchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHH
Q 010309 404 RNE--L----TTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQK 477 (513)
Q Consensus 404 ~~~--~----~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (513)
..+ . -.|+|.|+.|.+.||+++...||...-+.. .+...+.+ ..+..+ +..+++.
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~-----------L~~r~Yqe---~qLPal-----p~~vpp~ 485 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML-----------LDTRTYQE---SQLPAL-----PSRVPPV 485 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe-----------echhhhhh---hhCCCC-----cccCChH
Confidence 532 1 248999999999999999999997632211 00011111 111111 2234566
Q ss_pred HHHHHHHhcCCCCCCCCCHHHHHHHH
Q 010309 478 VVDLVYACTQHVPSMRPRMSHVVHQL 503 (513)
Q Consensus 478 l~~li~~cl~~dP~~RPs~~evl~~L 503 (513)
+.+++...|+.||++|++..-....|
T Consensus 486 ~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 486 ARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHHHHHHHhcCCccccCCccHHHhHH
Confidence 99999999999999999977665554
No 445
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=1.9e-19 Score=192.90 Aligned_cols=192 Identities=19% Similarity=0.210 Sum_probs=151.7
Q ss_pred cCCceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcC---CCcEeeeeeEEeeCCceEEEEeecc
Q 010309 228 EGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLH---HPNLVAVKGCCYDHGDRYIVYEFVV 304 (513)
Q Consensus 228 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~lv~e~~~ 304 (513)
...+.||+|+||.||+|...+|+.||+|+=+....-+ |.--.+++.+|+ -+.|..+...+.-.+.-+||+||.+
T Consensus 701 ~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~ 777 (974)
T KOG1166|consen 701 CISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSP 777 (974)
T ss_pred EEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccc
Confidence 3356789999999999998889999999887653221 111222333333 2445556666666778899999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecC-------CCCeEEeccccccc
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE-------EFGAHLMGVGLSKF 377 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~-------~~~~kl~Dfg~~~~ 377 (513)
.|+|.+++. ..+.+++...+.++.|++..+++||.. +|||+||||+|.||.. ...++|+|||.+-.
T Consensus 778 ~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siD 850 (974)
T KOG1166|consen 778 YGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSID 850 (974)
T ss_pred cccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEeccccee
Confidence 999999996 457799999999999999999999999 9999999999999932 34589999999976
Q ss_pred CCccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCC
Q 010309 378 VPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRP 429 (513)
Q Consensus 378 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p 429 (513)
+..-.....-....+|-.+--+|+..+.+++.+.|.|.|+.+++-||.|+.-
T Consensus 851 m~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 851 MKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred eeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 6433333222333478889999999999999999999999999999999754
No 446
>smart00090 RIO RIO-like kinase.
Probab=99.78 E-value=2e-18 Score=162.05 Aligned_cols=141 Identities=16% Similarity=0.150 Sum_probs=109.8
Q ss_pred cccCCceecccCceEEEEEE--eCCCCEEEEEEecccchh------------------------cHHHHHHHHHHHhhcC
Q 010309 226 FSEGNRLLGDSKTGGTYSGI--LPDGSRVAVKRLKRSSFQ------------------------RKKEFYSEIGRFARLH 279 (513)
Q Consensus 226 ~~~~~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 279 (513)
.+...+.||+|++|.||+|. ..+|+.||||+++..... ....+..|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35556788999999999998 568999999998754210 0123568999999997
Q ss_pred CC--cEeeeeeEEeeCCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-ceEcCCCC
Q 010309 280 HP--NLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH-VVHRDIRA 356 (513)
Q Consensus 280 h~--nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~-ivH~Dikp 356 (513)
+. .++++++. ...++||||+++.+|...+.. ...+.......++.|++.+|.+||+. + ++||||||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK----DVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccc----cCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 53 34444442 235899999999888665422 23456667789999999999999999 9 99999999
Q ss_pred CceEecCCCCeEEecccccccC
Q 010309 357 SNVLLDEEFGAHLMGVGLSKFV 378 (513)
Q Consensus 357 ~NIll~~~~~~kl~Dfg~~~~~ 378 (513)
+||+++ ++.++|+|||.+...
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhcc
Confidence 999999 788999999998754
No 447
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.78 E-value=2.3e-18 Score=158.38 Aligned_cols=131 Identities=20% Similarity=0.299 Sum_probs=107.6
Q ss_pred eecccCceEEEEEEeCCCCEEEEEEecccch--------hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 232 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSF--------QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
+||+|++|.||+|.. +|..|++|+...... .....+.+|++++..+.|+++.....+....+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 379999999999996 678999998654321 11256778999999999887665555556677789999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccC
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 378 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~ 378 (513)
+|++|.+++... . . .++.+++.+|.+||+. +++|+|++|+||+++ ++.++++|||++...
T Consensus 80 ~g~~l~~~~~~~----~-~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEG----N-D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhc----H-H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 999999887531 1 0 7899999999999999 999999999999999 789999999998764
No 448
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=3e-18 Score=159.12 Aligned_cols=133 Identities=19% Similarity=0.309 Sum_probs=113.3
Q ss_pred eecccCceEEEEEEeCCCCEEEEEEecccchh--------cHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 232 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQ--------RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
.||+|++|.||+|.. +|..|+||+....... ....+.+|+.++..+.|++|.....++...+..++||||+
T Consensus 3 ~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 81 (211)
T PRK14879 3 LIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI 81 (211)
T ss_pred ccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence 579999999999988 7888999987643211 1245788999999999999887777777778889999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccccccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF 377 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~ 377 (513)
+|++|.+++... .. .+..++.+++.+|.+||+. +++|+|++|+|||++ ++.++|+|||.+..
T Consensus 82 ~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 82 EGEPLKDLINSN-------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999988531 12 7889999999999999999 999999999999999 77899999999875
No 449
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.75 E-value=1.6e-17 Score=152.54 Aligned_cols=137 Identities=16% Similarity=0.149 Sum_probs=107.8
Q ss_pred ccCCceecccCceEEEEEEeCCCCEEEEEEecccchh----------------------cHHHHHHHHHHHhhcCCCc--
Q 010309 227 SEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQ----------------------RKKEFYSEIGRFARLHHPN-- 282 (513)
Q Consensus 227 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~h~n-- 282 (513)
+...+.||+|+||.||++..++|+.||||++...... ....+..|+.++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 4445678999999999999888999999987643210 1123677889999998774
Q ss_pred EeeeeeEEeeCCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEec
Q 010309 283 LVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 362 (513)
Q Consensus 283 Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~ 362 (513)
+++.++ ....++||||+++++|...... .....++.+++.++.++|+. +++|+||||+||+++
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~ 159 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVD 159 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEc
Confidence 444443 3456899999999998765420 23567889999999999999 999999999999999
Q ss_pred CCCCeEEecccccccCCc
Q 010309 363 EEFGAHLMGVGLSKFVPW 380 (513)
Q Consensus 363 ~~~~~kl~Dfg~~~~~~~ 380 (513)
.++.++|+|||.+.....
T Consensus 160 ~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 160 DDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCCcEEEEECCccccCCC
Confidence 999999999999976543
No 450
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.73 E-value=1.3e-18 Score=171.42 Aligned_cols=174 Identities=18% Similarity=0.322 Sum_probs=127.6
Q ss_pred ceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccc
Q 010309 295 DRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGL 374 (513)
Q Consensus 295 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 374 (513)
..||.|++|...+|.++|.... .....++...+.++.|++.|+.| + +.+|+|+||.||++..+..+||.|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~-~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRR-TGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCC-cccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 4689999999999999997533 34557788899999999999999 6 999999999999999999999999999
Q ss_pred cccCCccc----cccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCccccchhHHhhhHHh
Q 010309 375 SKFVPWEV----MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVS-GRRPAQAVDSVCWQSIFEWATPLV 449 (513)
Q Consensus 375 ~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 449 (513)
........ .........||..||+||.+.+..|+.++||||||+||+||++ -..++...
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~---------------- 466 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI---------------- 466 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH----------------
Confidence 98765544 1111222239999999999999999999999999999999998 22222110
Q ss_pred hcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHH
Q 010309 450 QSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSH 498 (513)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 498 (513)
....++-+..+.. .. ..-.+.-..|+.+++...|.+||++.+
T Consensus 467 --~t~~d~r~g~ip~----~~-~~d~p~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 467 --ATLTDIRDGIIPP----EF-LQDYPEEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred --HhhhhhhcCCCCh----HH-hhcCcHHHHHHHHhcCCCcccCchHHH
Confidence 0011111111110 00 011123468999999999999994443
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.73 E-value=3.2e-17 Score=173.02 Aligned_cols=133 Identities=18% Similarity=0.246 Sum_probs=108.7
Q ss_pred CCceecccCceEEEEEEeCCCCEEEEEEe-ccc-ch------hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEE
Q 010309 229 GNRLLGDSKTGGTYSGILPDGSRVAVKRL-KRS-SF------QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVY 300 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~-~~~-~~------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 300 (513)
..++||+|+||.||+|.+... .+++|+. .+. .. ...+.+.+|++++..++|++|+....+.......++||
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 415 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVM 415 (535)
T ss_pred ccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEE
Confidence 356789999999999987544 4444433 221 11 12356889999999999999988887777777889999
Q ss_pred eeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccC
Q 010309 301 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 378 (513)
Q Consensus 301 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~ 378 (513)
||+++++|.+++. ....++.+++.+|.+||+. +++||||||+|||+ .++.++|+|||+++..
T Consensus 416 E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 416 EYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999998874 3467899999999999999 99999999999999 5678999999999753
No 452
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.72 E-value=3.4e-18 Score=179.91 Aligned_cols=204 Identities=21% Similarity=0.299 Sum_probs=140.7
Q ss_pred CCceecccCceEEEEEEeCC-CCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCC
Q 010309 229 GNRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 307 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 307 (513)
..+++..|++|.||..+++. .+++|+| +.+... +.+- ++.....|.+| |+
T Consensus 87 ~IklisngAygavylvrh~~trqrfa~k-iNkq~l-----ilRn--ilt~a~npfvv---------------------gD 137 (1205)
T KOG0606|consen 87 TIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-----ILRN--ILTFAGNPFVV---------------------GD 137 (1205)
T ss_pred eeEeeccCCCCceeeeeccccccchhhc-ccccch-----hhhc--cccccCCccee---------------------ch
Confidence 35688999999999998754 6788884 332211 1111 22333344433 45
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc------
Q 010309 308 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE------ 381 (513)
Q Consensus 308 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~------ 381 (513)
-...++. -+.++.. ++.+++|||+. +|+|||+||+|.+|+.-|++|+.|||+++..-..
T Consensus 138 c~tllk~----~g~lPvd--------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~ 202 (1205)
T KOG0606|consen 138 CATLLKN----IGPLPVD--------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLK 202 (1205)
T ss_pred hhhhccc----CCCCcch--------hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhh
Confidence 5554532 2334432 27899999999 9999999999999999999999999999753211
Q ss_pred ------cccc-ceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccc
Q 010309 382 ------VMQE-RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRY 454 (513)
Q Consensus 382 ------~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (513)
..++ .....+||+.|+|||++....|...+|-|++|+|+||.+.|..||.+..+++....+ .. ....+
T Consensus 203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~v---is--d~i~w 277 (1205)
T KOG0606|consen 203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV---IS--DDIEW 277 (1205)
T ss_pred hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhh---hh--hhccc
Confidence 1111 112335999999999999999999999999999999999999999988765321111 00 00000
Q ss_pred cccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCC
Q 010309 455 LELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRP 494 (513)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 494 (513)
.+. ....++++.+++.++|+.+|..|-
T Consensus 278 ------------pE~-dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 278 ------------PEE-DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred ------------ccc-CcCCCHHHHHHHHHHHHhChHhhc
Confidence 000 123456799999999999999995
No 453
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.68 E-value=3.6e-16 Score=147.14 Aligned_cols=137 Identities=21% Similarity=0.217 Sum_probs=107.2
Q ss_pred CCceec-ccCceEEEEEEeCCCCEEEEEEecccc-------------hhcHHHHHHHHHHHhhcCCCcE--eeeeeEEee
Q 010309 229 GNRLLG-DSKTGGTYSGILPDGSRVAVKRLKRSS-------------FQRKKEFYSEIGRFARLHHPNL--VAVKGCCYD 292 (513)
Q Consensus 229 ~~~~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~nI--v~l~~~~~~ 292 (513)
...+|| .|+.|+||.+.. ++..+|||.+.... ......+.+|+.++..|.|++| +..+++...
T Consensus 35 ~~~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 35 QARVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred cCceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 345778 899999999988 57889999885421 1223567889999999988775 667766443
Q ss_pred CCc----eEEEEeeccC-CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCe
Q 010309 293 HGD----RYIVYEFVVN-GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 367 (513)
Q Consensus 293 ~~~----~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~ 367 (513)
... .++|||++++ .+|.+++.. ..++.. .+.+++.+|.+||+. ||+|+||||+|||++.++.+
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~-----~~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v 181 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQE-----APLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKF 181 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhc-----CCCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCE
Confidence 322 2599999997 699988853 234543 357899999999999 99999999999999998899
Q ss_pred EEecccccccC
Q 010309 368 HLMGVGLSKFV 378 (513)
Q Consensus 368 kl~Dfg~~~~~ 378 (513)
+|+|||.+...
T Consensus 182 ~LIDfg~~~~~ 192 (239)
T PRK01723 182 WLIDFDRGELR 192 (239)
T ss_pred EEEECCCcccC
Confidence 99999998753
No 454
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.68 E-value=2.8e-16 Score=142.90 Aligned_cols=135 Identities=19% Similarity=0.213 Sum_probs=97.9
Q ss_pred ceecccCceEEEEEEeCCCCEEEEEEecccchh--cHHH----------------------HHHHHHHHhhcCCC--cEe
Q 010309 231 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQ--RKKE----------------------FYSEIGRFARLHHP--NLV 284 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~h~--nIv 284 (513)
+.||+|+||.||+|...+|+.||||++...... .... ...|...+..+.+. .+.
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 82 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP 82 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence 467999999999999888999999998754211 1111 13566666666433 244
Q ss_pred eeeeEEeeCCceEEEEeeccCCCHHH-HhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCceEcCCCCCceEec
Q 010309 285 AVKGCCYDHGDRYIVYEFVVNGPLDR-WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD-KVKPHVVHRDIRASNVLLD 362 (513)
Q Consensus 285 ~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dikp~NIll~ 362 (513)
+.++. ...++||||++++++.. .+.. .... ..+..++.+++.++.++|. . +|+|+||||+||+++
T Consensus 83 ~~~~~----~~~~lv~e~~~g~~~~~~~l~~-----~~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~ 149 (187)
T cd05119 83 KPIDL----NRHVLVMEFIGGDGIPAPRLKD-----VRLL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD 149 (187)
T ss_pred ceEec----CCCEEEEEEeCCCCccChhhhh-----hhhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE
Confidence 44443 34689999999854421 1111 0011 5678899999999999999 7 999999999999999
Q ss_pred CCCCeEEecccccccCC
Q 010309 363 EEFGAHLMGVGLSKFVP 379 (513)
Q Consensus 363 ~~~~~kl~Dfg~~~~~~ 379 (513)
++.++|+|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 8899999999997554
No 455
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.65 E-value=1.1e-15 Score=133.36 Aligned_cols=134 Identities=18% Similarity=0.152 Sum_probs=113.2
Q ss_pred ceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCC--CcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 231 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHH--PNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
+.||+|.++.||++... +..+++|....... ...+.+|+.++..++| .++++++++....+..+++|||++++.+
T Consensus 4 ~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 4 KLLKGGLTNRVYLLGTK-DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred eecccccccceEEEEec-CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 45799999999999984 48899999876533 5678899999999976 5899999988888889999999988776
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccC
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 378 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~ 378 (513)
..+ +......++.+++.+|++||.....+++|+|++|+||+++..+.+++.|||.+...
T Consensus 81 ~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 81 DEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 432 55667788999999999999864447999999999999999889999999998753
No 456
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.64 E-value=2.1e-17 Score=173.88 Aligned_cols=249 Identities=20% Similarity=0.233 Sum_probs=186.8
Q ss_pred ceecccCceEEEEEEeCC--CCEEEEEEecccc--hhcHHHHHHHHHHHhhcC-CCcEeeeeeEEeeCCceEEEEeeccC
Q 010309 231 RLLGDSKTGGTYSGILPD--GSRVAVKRLKRSS--FQRKKEFYSEIGRFARLH-HPNLVAVKGCCYDHGDRYIVYEFVVN 305 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~ 305 (513)
+-||+|+++.|-...... ...+|+|.+.... .........|..+-..+. |+|++.+++...+.+..+++++|..+
T Consensus 26 ~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g 105 (601)
T KOG0590|consen 26 RSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDG 105 (601)
T ss_pred ccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcccc
Confidence 347999999998877533 4567777665442 222344555777777776 99999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCceEcCCCCCceEecCCC-CeEEecccccccCCc-cc
Q 010309 306 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLH-DKVKPHVVHRDIRASNVLLDEEF-GAHLMGVGLSKFVPW-EV 382 (513)
Q Consensus 306 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~~~~ivH~Dikp~NIll~~~~-~~kl~Dfg~~~~~~~-~~ 382 (513)
+++.+.+.. ......+...+-.++.|+..++.|+| .. ++.|+||||+|.+++..+ ..+++|||+|..+.. ..
T Consensus 106 ~~~f~~i~~--~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g 180 (601)
T KOG0590|consen 106 GSLFSKISH--PDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNG 180 (601)
T ss_pred ccccccccc--CCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccccccCC
Confidence 999887731 12224666677789999999999999 77 999999999999999999 999999999998776 44
Q ss_pred cccceeecCc-ccccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccc
Q 010309 383 MQERTVMAGG-TYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDP 460 (513)
Q Consensus 383 ~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (513)
........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+....... ..+......
T Consensus 181 ~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~--------------~~~~~~~~~ 246 (601)
T KOG0590|consen 181 AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD--------------GRYSSWKSN 246 (601)
T ss_pred cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc--------------ccceeeccc
Confidence 4444444557 9999999999874 45678999999999999999999987654432 011111111
Q ss_pred cccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Q 010309 461 LISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVV 500 (513)
Q Consensus 461 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 500 (513)
. ......+.........+++.+++..+|..|.+.+++.
T Consensus 247 ~--~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 247 K--GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred c--cccccCccccCChhhhhcccccccCCchhcccccccc
Confidence 0 0001222334556688999999999999999988875
No 457
>cd00037 CLECT C-type lectin (CTL)/C-type lectin-like (CTLD) domain. CLECT: C-type lectin (CTL)/C-type lectin-like (CTLD) domain; protein domains homologous to the carbohydrate-recognition domains (CRDs) of the C-type lectins. This group is chiefly comprised of eukaryotic CTLDs, but contains some, as yet functionally uncharacterized, bacterial CTLDs. Many CTLDs are calcium-dependent carbohydrate binding modules; other CTLDs bind protein ligands, lipids, and inorganic surfaces, including CaCO3 and ice. Animal C-type lectins are involved in such functions as extracellular matrix organization, endocytosis, complement activation, pathogen recognition, and cell-cell interactions. For example: mannose-binding lectin and lung surfactant proteins A and D bind carbohydrates on surfaces (e.g. pathogens, allergens, necrotic, and apoptotic cells) and mediate functions associated with killing and phagocytosis; P (platlet)-, E (endothelial)-, and L (leukocyte)- selectins (sels) mediate the initia
Probab=99.64 E-value=1.5e-15 Score=125.96 Aligned_cols=113 Identities=26% Similarity=0.550 Sum_probs=93.2
Q ss_pred eeEEEECCCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCC-CCCCeEEeeeecCCCCCCceEEcCCCC-CccCCcc
Q 010309 21 KCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGK-NVNGCWVGGRSINTTVGLSWKWSDNMS-KWNESIH 98 (513)
Q Consensus 21 ~Cy~~~~~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~-~~~~~WiGl~~~~~~~~~~w~W~dg~~-~~~~~~~ 98 (513)
.||+++....+|.+|+..|+.+||+|++|++.+|++||.+++.. ....+|||+++ ....+.|.|+||++ ..+.+|.
T Consensus 1 ~Cy~~~~~~~~~~~A~~~C~~~~~~L~~~~~~~e~~~i~~~~~~~~~~~~wvg~~~--~~~~~~~~~~~~~~~~~~~~w~ 78 (116)
T cd00037 1 SCYKFSTEKLTWEEAQEYCRSLGGHLASIHSEEENDFLASLLKKSSSSDVWIGLND--LSSEGTWKWSDGSPLVDYTNWA 78 (116)
T ss_pred CCEEEcCCccCHHHHHHHHHHcCCEEcccCCHHHHHHHHHHHhCCCCCCEEEcccc--cCcCCCeEecCCCccccccCCC
Confidence 49999999999999999999999999999999999999999852 25579999994 33468999999988 6778888
Q ss_pred cCCCCCCCCCCCCCCCCcCCCceeEeecC-CCcccccccCCCCCccccc
Q 010309 99 AVGSFNSSCTSLPCHVHATVDLCTLVSNG-SRSLVTERCNTSHPFICMV 146 (513)
Q Consensus 99 ~~~~~~~~~~~~~c~~~~~~~~C~~~~~~-~~~w~d~~C~~~~~~iC~~ 146 (513)
+++|. ....++|+.+... ...|.+.+|....+++|+.
T Consensus 79 ~~~~~-----------~~~~~~C~~~~~~~~~~~~~~~C~~~~~~iC~~ 116 (116)
T cd00037 79 PGEPN-----------PGGSEDCVVLSSSSDGKWNDVSCSSKLPFICEK 116 (116)
T ss_pred CCCcC-----------CCCCCCeeEEccCCCCCccCCCCCCCceeeecC
Confidence 87761 2233467777554 3579999999999999974
No 458
>PHA02911 C-type lectin-like protein; Provisional
Probab=99.60 E-value=3.3e-15 Score=128.32 Aligned_cols=107 Identities=22% Similarity=0.563 Sum_probs=79.3
Q ss_pred CcCCCCCCCcccCCCCeeEEEECCCCCh--HHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCCCCCeEEeeeecCCCCCC
Q 010309 5 WKAPCPPDWIINEEKSKCFGYIGNFRSW--DESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNGCWVGGRSINTTVGL 82 (513)
Q Consensus 5 ~~~~Cp~~w~~~~~~~~Cy~~~~~~~~w--~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~~~~~WiGl~~~~~~~~~ 82 (513)
.-.+||.+|. .|+++||+|+...++| ..|+++|..+||+|+. ++.+|++||++ +|.|+. +
T Consensus 99 ~~~pC~~nW~--~H~nkCYlFS~~s~sWsW~~Srr~C~~kGATLLk-~sdEELeFIqn--------~wkGks-------~ 160 (213)
T PHA02911 99 SEPICSRDWI--NHMGICLLSLGEEVGFRMEIAKRFCEKKDADLIG-KIDEEKKALEN--------IWTGND-------H 160 (213)
T ss_pred CCCCCchhhH--hhCCEEEEEeccccccchhHHHHHHHhcCCEecc-CcHHHHHHHHH--------HHhccc-------c
Confidence 3468999999 8999999999995555 8899999999999999 88899999985 466663 5
Q ss_pred ceEEcCCCCCccCCcccCCCCCCCCCCCCCCCCcCCCceeEeecC----CCcccccccCCCCCccccccc
Q 010309 83 SWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNG----SRSLVTERCNTSHPFICMVEH 148 (513)
Q Consensus 83 ~w~W~dg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~C~~~~~~----~~~w~d~~C~~~~~~iC~~~~ 148 (513)
.|.|+||.. . +-..+. .-+|+.+... .+...+.+|.....|||+...
T Consensus 161 ~~fWID~r~-n------gSt~n~------------s~sCA~Is~~~~~~~~~V~sesCs~~~~wICqK~~ 211 (213)
T PHA02911 161 SRFWIDNRA-A------ASTFDP------------VNECAIGTQNHIPEVPEVLKSPCDERHSFICIKKD 211 (213)
T ss_pred ceEEecCcc-c------cceecC------------CCCeEEEEcccccCCCceEccccCCCceEEEEecc
Confidence 677777621 0 000000 1136666542 246888999999999999864
No 459
>PF00059 Lectin_C: Lectin C-type domain; InterPro: IPR001304 Lectins occur in plants, animals, bacteria and viruses. Initially described for their carbohydrate-binding activity [], they are now recognised as a more diverse group of proteins, some of which are involved in protein-protein, protein-lipid or protein-nucleic acid interactions []. There are at least twelve structural families of lectins: C-type lectins, which are Ca+-dependent. S-type (galectins), a widespread family of glycan-binding proteins []. I-type, which have an immunoglobulin-like fold and can recognise sialic acids, other sugars and glycosaminoglycans []. P-type, which bind phosphomannosyl receptors []. Pentraxins []. (Trout) egg lectins. Calreticulin and calnexin, which act as molecular chaperones of the endoplasmic reticulum []. ERGIC-53 and VIP-36 []. Discoidins []. Eel aggutinins (fucolectins) []. Annexin lectins []. Fibrinogen-type lectins, which includes ficolins, tachylectins 5A and 5B, and Limax flavus (Spotted garden slug) agglutinin (these proteins have clear distinctions from one another, but they share a homologous fibrinogen-like domain used for carbohydrate binding). Also unclassified orphan lectins, including amphoterin, Cel-II, complement factor H, thrombospondin, sailic acid-binding lectins, adherence lectin, and cytokins (such as tumour necrosis factor and several interleukins). C-type lectins can be further divided into seven subgroups based on additional non-lectin domains and gene structure: (I) hyalectans, (II) asialoglycoprotein receptors, (III) collectins, (IV) selectins, (V) NK group transmembrane receptors, (VI) macrophage mannose receptors, and (VII) simple (single domain) lectins []. Therefore, lectins are a diverse group of proteins, both in terms of structure and activity. Carbohydrate binding ability may have evolved independently and sporadically in numerous unrelated families, where each evolved a structure that was conserved to fulfil some other activity and function. In general, animal lectins act as recognition molecules within the immune system, their functions involving defence against pathogens, cell trafficking, immune regulation and the prevention of autoimmunity [].; GO: 0005488 binding; PDB: 1T8D_A 2H2T_B 1T8C_A 2H2R_A 1TN3_A 1RJH_A 1HTN_A 3G8K_B 2E3X_B 1UMR_D ....
Probab=99.57 E-value=2.3e-15 Score=122.83 Aligned_cols=100 Identities=25% Similarity=0.528 Sum_probs=79.0
Q ss_pred CCCChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhCCCCCCeEEeeeecCCCCCCceEEcCCCCCcc----CCcccCCCC
Q 010309 28 NFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKWSDNMSKWN----ESIHAVGSF 103 (513)
Q Consensus 28 ~~~~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~~~~~~~WiGl~~~~~~~~~~w~W~dg~~~~~----~~~~~~~~~ 103 (513)
++++|.+|+..|+.+||+||+|++.+|++||.+++. ....+|||+. ....+.|.|+||++..+ .+| .
T Consensus 1 e~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~-~~~~~Wig~~---~~~~~~~~w~~~~~~~~~~~~~~w---~-- 71 (105)
T PF00059_consen 1 EPMTWEEAQQYCQSMGAHLASINSEEENDFIQSQLK-SNESYWIGLD---SDNNGTWKWIDGSPNSPENFYTNW---N-- 71 (105)
T ss_dssp EEEEHHHHHHHHHHTTSEEB-GSSHHHHHHHHHHHH-SSSEEEEEEE---SSSTSEEEETTSSBSSSTTBSGCB---S--
T ss_pred CCCCHHHHHHHHhcCCCEEeEeCCHHHhhhhhhccc-ccceeeeeee---ccccceeccccCCCcccccccccc---c--
Confidence 367999999999999999999999999999999985 3568999992 22458999999987653 344 1
Q ss_pred CCCCCCCCCCCCcCCCceeEe-ecCCCcccccccCCCCCccccc
Q 010309 104 NSSCTSLPCHVHATVDLCTLV-SNGSRSLVTERCNTSHPFICMV 146 (513)
Q Consensus 104 ~~~~~~~~c~~~~~~~~C~~~-~~~~~~w~d~~C~~~~~~iC~~ 146 (513)
.....++|+.+ ....+.|.+.+|....+|||+.
T Consensus 72 ----------~~~~~~~C~~~~~~~~~~w~~~~C~~~~~fiCek 105 (105)
T PF00059_consen 72 ----------PPNDSENCAYIYYSSSGKWNDVPCSEKYPFICEK 105 (105)
T ss_dssp ----------SGGSSEEEEEEGCSTTTEEEEEETTSEEEEEEEE
T ss_pred ----------cCCCCCCeEEEEEcCCCeEEeeCCCCCeeEEeeC
Confidence 12344578888 4455679999999999999974
No 460
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.56 E-value=4e-15 Score=138.20 Aligned_cols=206 Identities=19% Similarity=0.286 Sum_probs=145.4
Q ss_pred HHHHhhcCCCcEeeeeeEEeeC-----CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 010309 272 IGRFARLHHPNLVAVKGCCYDH-----GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVK 346 (513)
Q Consensus 272 ~~~l~~l~h~nIv~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ 346 (513)
+.-|-++.|.|||++..++.+. ....++.|||..|+|..+|++..+....+......+++.||++||.|||+. .
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 4456667899999999887654 345889999999999999998877788899999999999999999999995 7
Q ss_pred CCceEcCCCCCceEecCCCCeEEecccccccCCcc--ccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHH
Q 010309 347 PHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE--VMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIV 424 (513)
Q Consensus 347 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell 424 (513)
|.|+|+++..+-|++..++-+|+.--.-......- ..........+-++|.|||.-.....+.++|||+||+..+||.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 88999999999999998887877432211111100 0011111222678899999877777888999999999999999
Q ss_pred cCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 425 SGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 425 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
.+..--...... ...+ +.+...+.++... .-+.++.+|++..|+.||+|.+++-
T Consensus 277 ilEiq~tnseS~-----------~~~e----e~ia~~i~~len~--------lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 277 ILEIQSTNSESK-----------VEVE----ENIANVIIGLENG--------LQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred HheeccCCCcce-----------eehh----hhhhhheeeccCc--------cccCcCcccccCCCCCCcchhhhhc
Confidence 876542221110 0000 0011111111111 1246788999999999999998864
No 461
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.53 E-value=6.2e-14 Score=143.28 Aligned_cols=140 Identities=19% Similarity=0.200 Sum_probs=100.3
Q ss_pred ceecccCceEEEEEEeCCCCEEEEEEecccchhc----------------------------------------HHHHHH
Q 010309 231 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQR----------------------------------------KKEFYS 270 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~~~ 270 (513)
+.||.|++|.||+|++++|+.||||+.+...... +-++.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 4689999999999999999999999986542110 012455
Q ss_pred HHHHHhhcC-----CCcEeeeeeEE-eeCCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHH-HHHHHhc
Q 010309 271 EIGRFARLH-----HPNLVAVKGCC-YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQ-GIAFLHD 343 (513)
Q Consensus 271 E~~~l~~l~-----h~nIv~l~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~-~L~~LH~ 343 (513)
|+..+.++. +++| .+-.++ ...+..+|||||++|++|.++..... ... ....++.+++. .+..+|.
T Consensus 203 Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~---~~~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 203 EAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE---AGL---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHh---cCC---CHHHHHHHHHHHHHHHHHh
Confidence 666665552 3433 322232 22455799999999999988764311 112 23456666665 4788898
Q ss_pred CCCCCceEcCCCCCceEecCCCCeEEecccccccCCc
Q 010309 344 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 380 (513)
Q Consensus 344 ~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~ 380 (513)
. |++|+|++|.||+++.++.++++|||++..++.
T Consensus 276 ~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 D---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred C---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 8 999999999999999999999999999987754
No 462
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.48 E-value=3.4e-14 Score=143.17 Aligned_cols=242 Identities=18% Similarity=0.213 Sum_probs=178.2
Q ss_pred eecc--cCceEEEEEEe---CCCCEEEEEEecc--cchhcHHHHHHHHHHHhhc-CCCcEeeeeeEEeeCCceEEEEeec
Q 010309 232 LLGD--SKTGGTYSGIL---PDGSRVAVKRLKR--SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 232 ~lg~--G~~g~Vy~~~~---~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
-+|. |.+|.||.+.. .++..+|+|.-+. ........=.+|+....++ .|+|.++.+..+...+..++-+|++
T Consensus 121 ~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~ 200 (524)
T KOG0601|consen 121 RTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELC 200 (524)
T ss_pred ccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeeeccc
Confidence 4688 99999999986 3588899998433 2223334445677766777 5999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHH----HHHHHhcCCCCCceEcCCCCCceEecCC-CCeEEecccccccC
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQ----GIAFLHDKVKPHVVHRDIRASNVLLDEE-FGAHLMGVGLSKFV 378 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~----~L~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~~~~~ 378 (513)
+.+|..+.+. ....++...++.++.+... ||.++|+. +++|-|+||.||++..+ ...+++|||+...+
T Consensus 201 -~~sl~~~~~~---~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i 273 (524)
T KOG0601|consen 201 -GESLQSYCHT---PCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDFGLVSKI 273 (524)
T ss_pred -cchhHHhhhc---ccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCcceeEEc
Confidence 5788887764 2344778888888888888 99999999 99999999999999999 88999999999887
Q ss_pred Cccccccce---eecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccc
Q 010309 379 PWEVMQERT---VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYL 455 (513)
Q Consensus 379 ~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (513)
......... ....|...|++||+. .+-++..+|||++|.++.+..++..+....-...|.++..+.
T Consensus 274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~---------- 342 (524)
T KOG0601|consen 274 SDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY---------- 342 (524)
T ss_pred cCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc----------
Confidence 655422211 111367789999977 456788999999999999999988776543222122111100
Q ss_pred ccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 010309 456 ELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 501 (513)
+ ........+.++...+..|++.+|-.|++.+.+..
T Consensus 343 ------i----p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 343 ------I----PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ------C----chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0 11111122344666899999999999999877653
No 463
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.45 E-value=1.5e-12 Score=132.61 Aligned_cols=167 Identities=23% Similarity=0.264 Sum_probs=128.9
Q ss_pred eCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCCCHHHHhccCCCCCCCCCHH
Q 010309 246 LPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA 325 (513)
Q Consensus 246 ~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~ 325 (513)
..++.+|.|...+...........+.++.|+.++||||+++++.++..+..|||+|.+. .|..++.. +...
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-------l~~~ 104 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-------LGKE 104 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-------hHHH
Confidence 34688999998877655344567788999999999999999999999999999999984 46777754 4466
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeecCcccccccccccccC
Q 010309 326 MRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRN 405 (513)
Q Consensus 326 ~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 405 (513)
.....+.||+.||.|||+.+ +++|++|.-+.|+++..|..||++|.++......... ......-..|..|+.+...
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~--~~~~~~~~s~~~P~~~~~s 180 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAP--AKSLYLIESFDDPEEIDPS 180 (690)
T ss_pred HHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcc--cccchhhhcccChhhcCcc
Confidence 67778999999999999765 9999999999999999999999999988654322210 0000022346666654322
Q ss_pred CCCchhhHHHHHHHHHHHHcCC
Q 010309 406 ELTTKSDVYSFGVLLLEIVSGR 427 (513)
Q Consensus 406 ~~~~~sDvwSlGvil~elltg~ 427 (513)
. ...|.|-||++++|++.|.
T Consensus 181 ~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 181 E--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred c--cchhhhhHHHHHHHHhCcc
Confidence 2 4569999999999999993
No 464
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.42 E-value=2.3e-13 Score=140.63 Aligned_cols=148 Identities=16% Similarity=0.164 Sum_probs=96.9
Q ss_pred HhhCcccCCceecccCceEEEEEEeCC-CCEEEEEEecccchhc----------------------------------H-
Q 010309 222 ITKNFSEGNRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQR----------------------------------K- 265 (513)
Q Consensus 222 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~----------------------------------~- 265 (513)
+...|.. +-||+|++|.||+|++++ |+.||||++++.-... .
T Consensus 118 ~F~~fd~--~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~ 195 (537)
T PRK04750 118 WFDDFDI--KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEK 195 (537)
T ss_pred HHHhcCh--hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHH
Confidence 3344554 467999999999999987 9999999997541100 0
Q ss_pred -----HHHHHHHHHHhhcC----CCcEeeeeeEEee-CCceEEEEeeccCCCHHHHh--ccCCCCCCCCCHHHHHHHHHH
Q 010309 266 -----KEFYSEIGRFARLH----HPNLVAVKGCCYD-HGDRYIVYEFVVNGPLDRWL--HHIPRGGRSLDWAMRMKVATT 333 (513)
Q Consensus 266 -----~~~~~E~~~l~~l~----h~nIv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l--~~~~~~~~~l~~~~~~~i~~q 333 (513)
-++.+|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+.+.++- .........+....+..++.|
T Consensus 196 ~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q 275 (537)
T PRK04750 196 TLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ 275 (537)
T ss_pred HHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 12344555555442 3333333333332 45678999999999998743 211000112333334444444
Q ss_pred HHHHHHHHhcCCCCCceEcCCCCCceEecCCC----CeEEecccccccCCcc
Q 010309 334 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF----GAHLMGVGLSKFVPWE 381 (513)
Q Consensus 334 i~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~----~~kl~Dfg~~~~~~~~ 381 (513)
+. .. |++|+|+||.||+++.++ .+++.|||+...++..
T Consensus 276 if-------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 276 VF-------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred HH-------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 43 45 999999999999999888 8999999999877543
No 465
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.38 E-value=1.7e-12 Score=115.94 Aligned_cols=129 Identities=14% Similarity=0.043 Sum_probs=95.2
Q ss_pred eecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcE-eeeeeEEeeCCceEEEEeeccCCCHHH
Q 010309 232 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNL-VAVKGCCYDHGDRYIVYEFVVNGPLDR 310 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lv~e~~~~gsL~~ 310 (513)
.|+.|.++.||++.. .+..|++|+...... ....+.+|+.++..+.+.++ .+++... ....++|||+++|.++..
T Consensus 5 ~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 5 PLKGGMTNKNYRVEV-ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLT 80 (170)
T ss_pred ecCCcccCceEEEEE-CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccc
Confidence 468999999999987 478899999865432 23356789999998865444 3455443 334589999999988753
Q ss_pred HhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCceEcCCCCCceEecCCCCeEEeccccccc
Q 010309 311 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV--KPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF 377 (513)
Q Consensus 311 ~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~ 377 (513)
.. . ....++.+++.+|+.||+.. ...++|+|++|.||+++ ++.++++||+.+..
T Consensus 81 ~~---------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 81 ED---------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cc---------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 20 1 11345678999999999982 11259999999999999 56899999998764
No 466
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.36 E-value=9.6e-12 Score=111.94 Aligned_cols=135 Identities=15% Similarity=0.121 Sum_probs=99.0
Q ss_pred eecccCceEEEEEEeCC-------CCEEEEEEecccc----------------------hhcHHHH----HHHHHHHhhc
Q 010309 232 LLGDSKTGGTYSGILPD-------GSRVAVKRLKRSS----------------------FQRKKEF----YSEIGRFARL 278 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~----------------------~~~~~~~----~~E~~~l~~l 278 (513)
.||.|--+.||.|...+ +..+|||+.+... ....+.+ .+|++.|+++
T Consensus 4 ~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~rl 83 (197)
T cd05146 4 CISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKRM 83 (197)
T ss_pred ccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 57999999999998653 4799999875210 0012233 3799999998
Q ss_pred CC--CcEeeeeeEEeeCCceEEEEeeccCCCHHH-HhccCCCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCceEcCC
Q 010309 279 HH--PNLVAVKGCCYDHGDRYIVYEFVVNGPLDR-WLHHIPRGGRSLDWAMRMKVATTLAQGIAFL-HDKVKPHVVHRDI 354 (513)
Q Consensus 279 ~h--~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~~~~ivH~Di 354 (513)
.. -++++++++ ...+|||||+.+..+.. .+.+ ..++......+..+++.+|..| |.. +++|+||
T Consensus 84 ~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd-----~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL 151 (197)
T cd05146 84 QKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD-----AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL 151 (197)
T ss_pred HHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc-----cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 43 466666654 46789999997654321 2221 2355566778889999999999 788 9999999
Q ss_pred CCCceEecCCCCeEEecccccccCC
Q 010309 355 RASNVLLDEEFGAHLMGVGLSKFVP 379 (513)
Q Consensus 355 kp~NIll~~~~~~kl~Dfg~~~~~~ 379 (513)
++.|||++. +.+.|+|||.+....
T Consensus 152 s~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEEC-CcEEEEECCCceeCC
Confidence 999999974 579999999887553
No 467
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.24 E-value=6.6e-12 Score=126.78 Aligned_cols=248 Identities=17% Similarity=0.182 Sum_probs=174.7
Q ss_pred HHhhCcccCCceecccCceEEEEEEeC--CCCEEEEEEecccchhcHHH--HHHHHHHHhhc-CCCcEeeeeeEEeeCCc
Q 010309 221 SITKNFSEGNRLLGDSKTGGTYSGILP--DGSRVAVKRLKRSSFQRKKE--FYSEIGRFARL-HHPNLVAVKGCCYDHGD 295 (513)
Q Consensus 221 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 295 (513)
..+.+|.+.. .||.|.|+.|+..... ++..|++|.+.+.......+ -..|+.+...+ .|.+++..+..+.....
T Consensus 262 ~~~~df~~v~-~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 262 CKLTDFGLVS-KISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eecCCcceeE-EccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 3445566554 4599999999987743 58899999887653333222 24566666666 68899998888888888
Q ss_pred eEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCC-CCeEEecccc
Q 010309 296 RYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE-FGAHLMGVGL 374 (513)
Q Consensus 296 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~ 374 (513)
.|+-.||++++++...+. ....+++...+.+..|++.++.++|+. .++|+|+||+||++..+ +..++.|||.
T Consensus 341 ~~ip~e~~~~~s~~l~~~----~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~ 413 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSV----TSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGC 413 (524)
T ss_pred ccCchhhhcCcchhhhhH----HHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccc
Confidence 889999999998876552 234577788899999999999999999 99999999999999886 7789999999
Q ss_pred cccCCccccccceeecCccccc-ccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccc
Q 010309 375 SKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHR 453 (513)
Q Consensus 375 ~~~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 453 (513)
...+....... ...+..| .+|+......+-.+.|++|||..+.+.+++...-......
T Consensus 414 ~t~~~~~~~~~----~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~----------------- 472 (524)
T KOG0601|consen 414 WTRLAFSSGVF----HHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS----------------- 472 (524)
T ss_pred ccccceecccc----cccccccccchhhccccccccccccccccccccccccCcccCcccccc-----------------
Confidence 87533222111 1123334 3555555667888999999999999999987543221110
Q ss_pred ccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 010309 454 YLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQ 504 (513)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 504 (513)
..+....+ ...+ +....+..+.+.+...++..||.+.++....+
T Consensus 473 -~~i~~~~~----p~~~--~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 473 -LTIRSGDT----PNLP--GLKLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred -eeeecccc----cCCC--chHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 01111111 1111 12256778888999999999999988765443
No 468
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.23 E-value=7.9e-11 Score=109.95 Aligned_cols=142 Identities=25% Similarity=0.278 Sum_probs=109.7
Q ss_pred ceecccCceEEEEEEeCCCCEEEEEEecccch-hcHHHHHHHHHHHhhcCC--CcEeeeeeEEeeC---CceEEEEeecc
Q 010309 231 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHH--PNLVAVKGCCYDH---GDRYIVYEFVV 304 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~---~~~~lv~e~~~ 304 (513)
+.|+.|..+.||++...+|+.+++|....... .....+.+|+++++.+.+ .++.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 35799999999999987778999999865432 234578899999999965 3456677776553 25689999999
Q ss_pred CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------
Q 010309 305 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV--------------------------------------- 345 (513)
Q Consensus 305 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--------------------------------------- 345 (513)
|.++.+.+.. ..++......++.+++.+|..||+..
T Consensus 84 G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 84 GRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 9888765421 34677778888888888888888531
Q ss_pred --------------CCCceEcCCCCCceEecC--CCCeEEeccccccc
Q 010309 346 --------------KPHVVHRDIRASNVLLDE--EFGAHLMGVGLSKF 377 (513)
Q Consensus 346 --------------~~~ivH~Dikp~NIll~~--~~~~kl~Dfg~~~~ 377 (513)
...++|+|+.|.||+++. ++.+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 235799999999999998 56689999998864
No 469
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.23 E-value=1.2e-10 Score=101.13 Aligned_cols=130 Identities=20% Similarity=0.250 Sum_probs=100.2
Q ss_pred eecccCceEEEEEEeCCCCEEEEEEecccch--------hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeec
Q 010309 232 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSF--------QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 303 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 303 (513)
++++|+-+.+|.+.+ -|.++++|.-.+... -....-.+|+.++.++.--.|...+=+..+.+...|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDF-LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeec-cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 568999999999976 455677775432211 11245678999999986555555555556778888999999
Q ss_pred cCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccccccc
Q 010309 304 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF 377 (513)
Q Consensus 304 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~ 377 (513)
+|..|.+++... ...++..+-.-+.-||.. +|+|+||.++||++..+. +.++|||++..
T Consensus 82 ~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA-----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc-----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999999888641 245677777788889999 999999999999998874 99999999974
No 470
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.21 E-value=1.6e-10 Score=99.82 Aligned_cols=142 Identities=19% Similarity=0.221 Sum_probs=105.4
Q ss_pred CceecccCceEEEEEEeCCCCEEEEEEec-cc-------chhcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEe
Q 010309 230 NRLLGDSKTGGTYSGILPDGSRVAVKRLK-RS-------SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYE 301 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~-~~-------~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 301 (513)
-.++-+|+-+.|+++.+ .|+...||.-. +. ..-..+...+|+++|.++.--.|.-..-++.+...-.|+||
T Consensus 12 l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 12 LELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred ceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 34789999999999998 78887787532 21 11123567889999999865555544455667777789999
Q ss_pred eccC-CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCC---eEEeccccccc
Q 010309 302 FVVN-GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG---AHLMGVGLSKF 377 (513)
Q Consensus 302 ~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~---~kl~Dfg~~~~ 377 (513)
|++| .++.+++...-. ..........++.+|-..+.-||.. +|+|+||..+||++.+++. +.++|||++..
T Consensus 91 ~~~g~~~vk~~i~~~~~--~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTME--DESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred eccchhHHHHHHHHHcc--CcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 9976 478888865322 2223333367889999999999999 9999999999999966543 58999999864
No 471
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.13 E-value=1.5e-09 Score=107.56 Aligned_cols=218 Identities=16% Similarity=0.196 Sum_probs=153.4
Q ss_pred CceEEEEEEe-CCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEeeeeeEEee----CCceEEEEeeccC-CCHHH
Q 010309 237 KTGGTYSGIL-PDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD----HGDRYIVYEFVVN-GPLDR 310 (513)
Q Consensus 237 ~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~lv~e~~~~-gsL~~ 310 (513)
.-.+.|++.. .||..|++|+++............-+++++++.|+|||++.+++.. +..+++|++|+++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 4467899885 4799999999954433333333455788999999999999999873 4567999999986 46766
Q ss_pred HhccCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCC
Q 010309 311 WLHHIP-----------RGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVP 379 (513)
Q Consensus 311 ~l~~~~-----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~ 379 (513)
+-.... ..+...++..++.++.|+..||.++|+. |+.-+-|.|.+||++.+.+++|+..|+...+.
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeec
Confidence 543221 2234578899999999999999999999 99999999999999999999999888877654
Q ss_pred ccccccceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhccccccccc
Q 010309 380 WEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLD 459 (513)
Q Consensus 380 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (513)
.+.. |-+.+ -.+-|.=.||.+++.|.||..--...+.. ++. .
T Consensus 445 ~d~~----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~--~~s-----------~------ 486 (655)
T KOG3741|consen 445 EDPT----------------EPLES---QQQNDLRDLGLLLLALATGTENSNRTDST--QSS-----------H------ 486 (655)
T ss_pred CCCC----------------cchhH---HhhhhHHHHHHHHHHHhhcccccccccch--HHH-----------H------
Confidence 3320 11111 23579999999999999996442111110 000 0
Q ss_pred ccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 010309 460 PLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQL 503 (513)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 503 (513)
........+.++++++.-....++++ -++.+++..+
T Consensus 487 -------~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 487 -------LTRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred -------HHHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence 00012245566778888888888876 5677776543
No 472
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.11 E-value=2.4e-11 Score=129.01 Aligned_cols=242 Identities=19% Similarity=0.176 Sum_probs=163.3
Q ss_pred ceecccCceEEEEEEeC-CCCEEEEEEecccch---hcHHHHHHHHHHHhhcCCCcEeeeeeEEeeCCceEEEEeeccCC
Q 010309 231 RLLGDSKTGGTYSGILP-DGSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 306 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 306 (513)
+-+.+|.++.++.+.-. .|...++|+...... .+.+....+-.++-..+||-++...-.+......+||++|+.++
T Consensus 810 ~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~ 889 (1205)
T KOG0606|consen 810 KPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGG 889 (1205)
T ss_pred ccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccC
Confidence 35678889988877632 243344444432211 11122233333333345677776555555677889999999999
Q ss_pred CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCcc-----
Q 010309 307 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE----- 381 (513)
Q Consensus 307 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~----- 381 (513)
+|...|+.. ...+..-.+..+..+..++++||.. .+.|+|++|.|+++..++..+++|||.......-
T Consensus 890 ~~~Skl~~~----~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~ 962 (1205)
T KOG0606|consen 890 DLPSKLHNS----GCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTD 962 (1205)
T ss_pred CchhhhhcC----CCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccccccccCcCC
Confidence 999988752 2455556667777889999999998 8999999999999999999999999843221100
Q ss_pred ----------------c----cc----cceeecCcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCccc
Q 010309 382 ----------------V----MQ----ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVC 437 (513)
Q Consensus 382 ----------------~----~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~ 437 (513)
. .. .......+|+.|.+||.+.+......+|.|++|++++|.++|.+||......
T Consensus 963 ~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq- 1041 (1205)
T KOG0606|consen 963 LSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQ- 1041 (1205)
T ss_pred cccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchh-
Confidence 0 00 0011223899999999999999999999999999999999999999876542
Q ss_pred cchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 010309 438 WQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPRMS 497 (513)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 497 (513)
+.+ ..++..... -..-+...+.+..+++...+..+|.+|..+.
T Consensus 1042 --~~f------------~ni~~~~~~---~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1042 --QIF------------ENILNRDIP---WPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred --hhh------------hccccCCCC---CCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 111 111111110 0111234556788999999999999997765
No 473
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.07 E-value=8.5e-10 Score=99.01 Aligned_cols=125 Identities=24% Similarity=0.302 Sum_probs=83.3
Q ss_pred EEEEEEeCCCCEEEEEEecccc--h------------------------hcHHHHHHHHHHHhhcCCC--cEeeeeeEEe
Q 010309 240 GTYSGILPDGSRVAVKRLKRSS--F------------------------QRKKEFYSEIGRFARLHHP--NLVAVKGCCY 291 (513)
Q Consensus 240 ~Vy~~~~~~~~~vavK~~~~~~--~------------------------~~~~~~~~E~~~l~~l~h~--nIv~l~~~~~ 291 (513)
.||.|...+|..+|||+.+... . .......+|++.|.++..- ++++++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899999899999999875320 0 0013467899999999765 566666542
Q ss_pred eCCceEEEEeecc--CCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHH-HhcCCCCCceEcCCCCCceEecCCCCeE
Q 010309 292 DHGDRYIVYEFVV--NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAF-LHDKVKPHVVHRDIRASNVLLDEEFGAH 368 (513)
Q Consensus 292 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~-LH~~~~~~ivH~Dikp~NIll~~~~~~k 368 (513)
..+|||||++ |..+..+... .++......++.+++..+.. +|.. ||+|+||.+.|||++++ .+.
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~------~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDV------DLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHC------GGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred ---CCEEEEEecCCCccchhhHHhc------cccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 4579999998 6555443321 11234456677888885555 5687 99999999999999988 899
Q ss_pred EecccccccC
Q 010309 369 LMGVGLSKFV 378 (513)
Q Consensus 369 l~Dfg~~~~~ 378 (513)
|+|||.+...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999988654
No 474
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.06 E-value=3.6e-09 Score=100.72 Aligned_cols=141 Identities=13% Similarity=0.128 Sum_probs=102.0
Q ss_pred ceecccCceEEEEEEeCCCCEEEEEEecccchh-----------cHHHHHHHHHHHhhcCCCc--EeeeeeEEee-----
Q 010309 231 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQ-----------RKKEFYSEIGRFARLHHPN--LVAVKGCCYD----- 292 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~----- 292 (513)
+++-......|++... +|+.|.||+....... ....+.+|...+.+|...+ .++++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4455555566777766 7889999977543311 1124778998888884333 3334444433
Q ss_pred CCceEEEEeeccCC-CHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecC-------C
Q 010309 293 HGDRYIVYEFVVNG-PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE-------E 364 (513)
Q Consensus 293 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~-------~ 364 (513)
....+||+|++++. +|.+++.... ....+......++.+++..+.-||.. ||+|+|+++.|||++. +
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCC
Confidence 23468999999876 8999885321 23456677889999999999999999 9999999999999975 4
Q ss_pred CCeEEeccccccc
Q 010309 365 FGAHLMGVGLSKF 377 (513)
Q Consensus 365 ~~~kl~Dfg~~~~ 377 (513)
..+.|+||+.+..
T Consensus 182 ~~~~LIDl~r~~~ 194 (268)
T PRK15123 182 LKLSVIDLHRAQI 194 (268)
T ss_pred ceEEEEECCcccc
Confidence 6789999998864
No 475
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.98 E-value=5.2e-09 Score=101.34 Aligned_cols=267 Identities=17% Similarity=0.160 Sum_probs=161.9
Q ss_pred CCceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhc-CCCcEeeeeeE----Ee--e-CCceEEEE
Q 010309 229 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGC----CY--D-HGDRYIVY 300 (513)
Q Consensus 229 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~----~~--~-~~~~~lv~ 300 (513)
..+-||+|+-+.+|..- +-...+.|+..........+... .|... .||-+..-+.+ .. + ....-++|
T Consensus 15 ~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~aqk~a---~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQAQKVA---ELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecc--hhhchhheeecCCCchHHHHHHH---HhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 34567999999999643 22234567776553332222222 22333 45543321111 11 1 12256777
Q ss_pred eeccCCC-HHHHhcc--CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEeccccccc
Q 010309 301 EFVVNGP-LDRWLHH--IPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF 377 (513)
Q Consensus 301 e~~~~gs-L~~~l~~--~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~ 377 (513)
..+.+.- ...++.- .++.-....|...+..++.++.+.+-||.. |.+-+|+.++|+|+++++.+.|.|-..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccceee
Confidence 7776542 2222221 112224578899999999999999999999 999999999999999999999988654333
Q ss_pred CCccccccceeecCcccccccccccc-----cCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCcccc-chhHHhhhHHhh
Q 010309 378 VPWEVMQERTVMAGGTYGYLAPEFVY-----RNELTTKSDVYSFGVLLLEIVSG-RRPAQAVDSVCW-QSIFEWATPLVQ 450 (513)
Q Consensus 378 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg-~~p~~~~~~~~~-~~~~~~~~~~~~ 450 (513)
... ........|...|.+||.-. +-..+...|.|.||+++++++.| ++||++...... ..-.+ ..+.
T Consensus 167 ~~n---g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E---~~Ia 240 (637)
T COG4248 167 NAN---GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE---TDIA 240 (637)
T ss_pred ccC---CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch---hhhh
Confidence 221 11222334889999999764 23456789999999999999986 999987532100 00000 0011
Q ss_pred ccccccccc--ccccCCCCCCCcHHHHHHHHHHHHHhcCCC--CCCCCCHHHHHHHHhcCcCC
Q 010309 451 SHRYLELLD--PLISSLSSDIPEAGVVQKVVDLVYACTQHV--PSMRPRMSHVVHQLQQLAQP 509 (513)
Q Consensus 451 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~d--P~~RPs~~evl~~L~~~~~~ 509 (513)
.+.+...-+ .-+...+...+-.-.++.+..|..+|+... +.-|||++..+..|..+...
T Consensus 241 ~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~ 303 (637)
T COG4248 241 HGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ 303 (637)
T ss_pred cceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence 111111111 111122233444556678888999998753 56899999998888766543
No 476
>PF05473 Herpes_UL45: UL45 protein; InterPro: IPR008646 This family consists several UL45 proteins and homologues found in the herpes simplex virus family. The herpes simplex virus UL45 gene encodes an 18 kDa virion envelope protein whose function remains unknown. It has been suggested that the 18 kDa UL45 gene product is required for efficient growth in the central nervous system at low doses and may play an important role under the conditions of a naturally acquired infection []. The Equine herpesvirus 1 UL45 protein represents a type II membrane glycoprotein which has found to be non-essential for EHV-1 growth in vitro but deletion reduces the viruses' replication efficiency [].
Probab=98.92 E-value=3.3e-09 Score=95.48 Aligned_cols=58 Identities=19% Similarity=0.507 Sum_probs=51.1
Q ss_pred CCcCCCCCCCcccCCCCeeEEEECCCC-ChHHHHHHHhhcCCEEeeeCCHHHHHHHHHHhC
Q 010309 4 DWKAPCPPDWIINEEKSKCFGYIGNFR-SWDESETYCKEIGGHLAALTSYEEEHSAQKLCG 63 (513)
Q Consensus 4 ~~~~~Cp~~w~~~~~~~~Cy~~~~~~~-~w~~a~~~C~~~~~~L~~i~~~~e~~f~~~~~~ 63 (513)
+.+++||+||. .|+++||+|+...+ +|.+|+..|++++++|+.+++.+....+.....
T Consensus 80 ~~~~~CP~~Wi--~~~~~Cy~~~~~~~~t~~eA~~~C~~~~s~L~~~~~~~~L~~ll~~~~ 138 (200)
T PF05473_consen 80 LGCGPCPKGWI--GYNNSCYRFSNSPKKTWEEARNICAAYNSTLANVNNAKSLLELLDVLN 138 (200)
T ss_pred ccCCCCCccce--eeCCEEEEEeCCCCcCHHHHHHHHHhcCCcCCCchhHHHHHHHHHHhc
Confidence 35789999999 89999999999998 999999999999999999988887766666543
No 477
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.83 E-value=8.1e-10 Score=113.37 Aligned_cols=152 Identities=21% Similarity=0.283 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccc-------eeecCcccccccccccc
Q 010309 331 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQER-------TVMAGGTYGYLAPEFVY 403 (513)
Q Consensus 331 ~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~ 403 (513)
+.+++.||.|+|... ++||++|.|++|.++.++..||+.|+.+........... .........|.|||++.
T Consensus 105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 345569999999875 999999999999999999999999998865543111000 00111356799999999
Q ss_pred cCCCCchhhHHHHHHHHHHHH-cCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHH
Q 010309 404 RNELTTKSDVYSFGVLLLEIV-SGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLV 482 (513)
Q Consensus 404 ~~~~~~~sDvwSlGvil~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 482 (513)
+...+.++|+||+|+++|.+. .|+.-+............ ....+.. ........+.++.+=+
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~------------~~~~~~~-----~~~~s~~~p~el~~~l 245 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS------------RNLLNAG-----AFGYSNNLPSELRESL 245 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhh------------hcccccc-----cccccccCcHHHHHHH
Confidence 888889999999999999999 455554433211100000 0001111 1111234567899999
Q ss_pred HHhcCCCCCCCCCHHHHHH
Q 010309 483 YACTQHVPSMRPRMSHVVH 501 (513)
Q Consensus 483 ~~cl~~dP~~RPs~~evl~ 501 (513)
.+++..++.-||++.++..
T Consensus 246 ~k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 246 KKLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred HHHhcCCcccCcchhhhhc
Confidence 9999999999998777654
No 478
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.81 E-value=3.6e-08 Score=91.02 Aligned_cols=132 Identities=19% Similarity=0.219 Sum_probs=96.0
Q ss_pred CceecccCceEEEEEEeCCCCEEEEEEecccc----------------------hhcHHHHHHHHHHHhhcCCC--cEee
Q 010309 230 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSS----------------------FQRKKEFYSEIGRFARLHHP--NLVA 285 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~E~~~l~~l~h~--nIv~ 285 (513)
...||-|--+.||.|..++|.++|||.-+... .......++|.++|.+|... .+++
T Consensus 96 G~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~ 175 (304)
T COG0478 96 GTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPK 175 (304)
T ss_pred ccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCCC
Confidence 45679999999999999999999999754211 01123467899999999654 6666
Q ss_pred eeeEEeeCCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC
Q 010309 286 VKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 365 (513)
Q Consensus 286 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~ 365 (513)
.+++ +...+|||+++|-.|... +++....-.++..|+.-+.-+-.. |+||+|+.+=||+++++|
T Consensus 176 P~~~----nRHaVvMe~ieG~eL~~~---------r~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~dg 239 (304)
T COG0478 176 PIAW----NRHAVVMEYIEGVELYRL---------RLDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTEDG 239 (304)
T ss_pred cccc----ccceeeeehcccceeecc---------cCcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecCC
Confidence 6553 566799999988655432 122334444555555555555566 999999999999999999
Q ss_pred CeEEeccccccc
Q 010309 366 GAHLMGVGLSKF 377 (513)
Q Consensus 366 ~~kl~Dfg~~~~ 377 (513)
.+.++||--+..
T Consensus 240 ~~~vIDwPQ~v~ 251 (304)
T COG0478 240 DIVVIDWPQAVP 251 (304)
T ss_pred CEEEEeCccccc
Confidence 999999976653
No 479
>PRK09902 hypothetical protein; Provisional
Probab=98.77 E-value=2e-07 Score=84.27 Aligned_cols=138 Identities=13% Similarity=0.087 Sum_probs=103.4
Q ss_pred cccCceEEEEEEeCCCCEEEEEEeccc---c---hhcHHHHHHHHHHHhhcCC--CcEeeeeeEEeeC----CceEEEEe
Q 010309 234 GDSKTGGTYSGILPDGSRVAVKRLKRS---S---FQRKKEFYSEIGRFARLHH--PNLVAVKGCCYDH----GDRYIVYE 301 (513)
Q Consensus 234 g~G~~g~Vy~~~~~~~~~vavK~~~~~---~---~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~----~~~~lv~e 301 (513)
|.||.+.|++... +|..+-+|+-... + ......|.+|+..|.+|.. -.+.++...-... -..+||+|
T Consensus 27 ~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe 105 (216)
T PRK09902 27 RRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTE 105 (216)
T ss_pred CCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEE
Confidence 7899999999887 5557889976421 1 2356789999999999953 2244444221111 12489999
Q ss_pred eccC-CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCC--eEEeccccccc
Q 010309 302 FVVN-GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG--AHLMGVGLSKF 377 (513)
Q Consensus 302 ~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~--~kl~Dfg~~~~ 377 (513)
-+++ -+|.+++.+. ...+.+......++.+++..+.-||+. |+.|+|+.+.|||++.++. ++++||.-++.
T Consensus 106 ~L~g~~~L~~~l~~~--~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 106 DMAGFISIADWYAQH--AVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred eCCCCccHHHHHhcC--CcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 7753 5898888542 223567778889999999999999999 9999999999999986667 99999987764
No 480
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.76 E-value=7.4e-08 Score=88.72 Aligned_cols=124 Identities=25% Similarity=0.251 Sum_probs=91.1
Q ss_pred CCCEEEEEEecccch-------hcHHHHHHHHHHHhhcCC--CcEeeeeeEEeeCC----ceEEEEeeccCC-CHHHHhc
Q 010309 248 DGSRVAVKRLKRSSF-------QRKKEFYSEIGRFARLHH--PNLVAVKGCCYDHG----DRYIVYEFVVNG-PLDRWLH 313 (513)
Q Consensus 248 ~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~----~~~lv~e~~~~g-sL~~~l~ 313 (513)
.++.+.+|.....-. .......+|...+..|.. -.+++.+++.+... ..++|+|++++. +|.+++.
T Consensus 31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~ 110 (206)
T PF06293_consen 31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ 110 (206)
T ss_pred cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence 355666665432211 233567888888888743 33455556555432 348999999874 7999886
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCC---CeEEecccccccC
Q 010309 314 HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF---GAHLMGVGLSKFV 378 (513)
Q Consensus 314 ~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~---~~kl~Dfg~~~~~ 378 (513)
... ..+......++.+++..++-||.. ||+|+|+++.|||++.+. .+.++||+.++..
T Consensus 111 ~~~----~~~~~~~~~ll~~l~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 111 QWE----QLDPSQRRELLRALARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred hhc----ccchhhHHHHHHHHHHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 421 266677889999999999999999 999999999999999887 7999999987754
No 481
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.70 E-value=1.5e-07 Score=97.17 Aligned_cols=143 Identities=15% Similarity=0.160 Sum_probs=93.3
Q ss_pred ceecccCceEEEEEEeCCCCEEEEEEecccchhc----------------------------------------HHHHHH
Q 010309 231 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQR----------------------------------------KKEFYS 270 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~~~ 270 (513)
.-|+.++-|.||+|++++|+.||||+.++.-... +-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 4579999999999999999999999986431100 012345
Q ss_pred HHHHHhhcC-----CCcEeeeeeEEeeCCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 010309 271 EIGRFARLH-----HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV 345 (513)
Q Consensus 271 E~~~l~~l~-----h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 345 (513)
|+..+.+++ .|+|.-..=+.+-.+...|+|||++|..+.+...... ..++...+.....++. +..+-..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~---~g~d~k~ia~~~~~~f--~~q~~~d- 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS---AGIDRKELAELLVRAF--LRQLLRD- 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh---cCCCHHHHHHHHHHHH--HHHHHhc-
Confidence 665555552 3433222222233466789999999998888753211 2344333222222211 2222234
Q ss_pred CCCceEcCCCCCceEecCCCCeEEecccccccCCcc
Q 010309 346 KPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 346 ~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 381 (513)
|+.|.|..|.||+++.++.+.+.|||+...++..
T Consensus 285 --gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 285 --GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred --CccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 9999999999999999999999999999877643
No 482
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.54 E-value=1.4e-06 Score=81.36 Aligned_cols=139 Identities=14% Similarity=0.205 Sum_probs=85.8
Q ss_pred eecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCc--EeeeeeEEeeCCceEEEEeeccCCC-H
Q 010309 232 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPN--LVAVKGCCYDHGDRYIVYEFVVNGP-L 308 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~~~~~lv~e~~~~gs-L 308 (513)
.||+|..+.||+. .+..+++|...... ......+|.++++.+..-. +.+.+++....+...+|||+++|.+ +
T Consensus 8 ~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 8 QTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 5799999999983 35568899886543 3456789999999885433 4667777777777889999998863 2
Q ss_pred HHHh---------------------ccCCCCCCCCCHHHHHHHHH----------HHHH-HHHHHhcC-CCCCceEcCCC
Q 010309 309 DRWL---------------------HHIPRGGRSLDWAMRMKVAT----------TLAQ-GIAFLHDK-VKPHVVHRDIR 355 (513)
Q Consensus 309 ~~~l---------------------~~~~~~~~~l~~~~~~~i~~----------qi~~-~L~~LH~~-~~~~ivH~Dik 355 (513)
...+ +........++... ..+.. .+.. ...+|... ..+.++|+|+.
T Consensus 83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~-~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~ 161 (226)
T TIGR02172 83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYK-EKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ 161 (226)
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHH-HHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence 1111 11100111111100 00000 0111 12222211 13367899999
Q ss_pred CCceEecCCCCeEEeccccccc
Q 010309 356 ASNVLLDEEFGAHLMGVGLSKF 377 (513)
Q Consensus 356 p~NIll~~~~~~kl~Dfg~~~~ 377 (513)
|.||++++++ +.|+||+.+..
T Consensus 162 ~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 162 IGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCcEEEcCCC-cEEEechhcCc
Confidence 9999999887 99999998764
No 483
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.43 E-value=2.4e-06 Score=78.39 Aligned_cols=154 Identities=19% Similarity=0.196 Sum_probs=102.2
Q ss_pred cCHHHHHHHhhCc--ccCCceecccCceEEEEEEeCCCCEEEEEEecccchh-------------------cHHH-----
Q 010309 214 FTTEELRSITKNF--SEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQ-------------------RKKE----- 267 (513)
Q Consensus 214 ~~~~~l~~~~~~~--~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------------~~~~----- 267 (513)
.+.+.+..+.... .+....|+.|--+.||+|...++..+|||+++..... ...+
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 3444555554332 2233456778888999999888999999998643111 0111
Q ss_pred HHHHHHHHhhcC--CCcEeeeeeEEeeCCceEEEEeeccCCCH-HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC
Q 010309 268 FYSEIGRFARLH--HPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDK 344 (513)
Q Consensus 268 ~~~E~~~l~~l~--h~nIv~l~~~~~~~~~~~lv~e~~~~gsL-~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~ 344 (513)
..+|+..|.++. +-.+.+.+++. +..|||||+....+ .-.|. .-++...+...+..++++.+.-|-..
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~Lk-----Dv~~e~~e~~~~~~~~v~~~~~l~~~ 185 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLK-----DVPLELEEAEGLYEDVVEYMRRLYKE 185 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcc-----cCCcCchhHHHHHHHHHHHHHHHHHh
Confidence 256888888873 44455555443 34699999954311 11111 12233446777888898888888773
Q ss_pred CCCCceEcCCCCCceEecCCCCeEEecccccccCC
Q 010309 345 VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVP 379 (513)
Q Consensus 345 ~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~ 379 (513)
+ ++||+||+.=|||+. ++.+.++|+|-|....
T Consensus 186 a--~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 186 A--GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred c--CcccccchhhheEEE-CCeEEEEECccccccC
Confidence 2 999999999999999 7789999999887654
No 484
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.42 E-value=2.7e-06 Score=77.21 Aligned_cols=140 Identities=14% Similarity=0.192 Sum_probs=89.8
Q ss_pred HHhhCcccCCceecccCceEEEEEEeCCCCEEEEEEecccchhcHHH---------HHHHHHHHhhcCC---CcEeeeee
Q 010309 221 SITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKE---------FYSEIGRFARLHH---PNLVAVKG 288 (513)
Q Consensus 221 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h---~nIv~l~~ 288 (513)
.+.++-....+++-......|.+-.. +|..+++|..+.......+. ..+++..+.+++. ..++.++.
T Consensus 27 ~i~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl 105 (229)
T PF06176_consen 27 KILDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL 105 (229)
T ss_pred HHHhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence 33444444445666766677766666 78999999887653222222 2334444444432 22222222
Q ss_pred EEee-----CCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecC
Q 010309 289 CCYD-----HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE 363 (513)
Q Consensus 289 ~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~ 363 (513)
+.+. ....+|+|||++|..|.++.. +++ .++..+.+++.-||.. |++|+|..|.|++++.
T Consensus 106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~ 170 (229)
T PF06176_consen 106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSN 170 (229)
T ss_pred eeeeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEEC
Confidence 2221 234568999999988866432 222 2456677889999999 9999999999999986
Q ss_pred CCCeEEeccccccc
Q 010309 364 EFGAHLMGVGLSKF 377 (513)
Q Consensus 364 ~~~~kl~Dfg~~~~ 377 (513)
+ .++++||+..+.
T Consensus 171 ~-~i~iID~~~k~~ 183 (229)
T PF06176_consen 171 N-GIRIIDTQGKRM 183 (229)
T ss_pred C-cEEEEECccccc
Confidence 6 599999987653
No 485
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.33 E-value=1.9e-07 Score=95.19 Aligned_cols=180 Identities=17% Similarity=0.127 Sum_probs=132.0
Q ss_pred ecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCc-EeeeeeEEeeCCceEEEEeeccCC-CHHH
Q 010309 233 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPN-LVAVKGCCYDHGDRYIVYEFVVNG-PLDR 310 (513)
Q Consensus 233 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~lv~e~~~~g-sL~~ 310 (513)
+++|+++.+++.+....+....+.+... ....-++++|.+++||| .+..++-+..++...++++++.++ +-..
T Consensus 250 fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~ 324 (829)
T KOG0576|consen 250 FVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSAL 324 (829)
T ss_pred HHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccc
Confidence 4889999999887544444446665433 34556888999999999 777777777778889999999776 2211
Q ss_pred HhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEecCCCCeEEecccccccCCccccccceeec
Q 010309 311 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 390 (513)
Q Consensus 311 ~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 390 (513)
.. ......+...+...+.+.-..+|++||+. .=+|+| ||+.++ +..+..||+....+.... .....
T Consensus 325 ~~---~~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~---~~~t~ 390 (829)
T KOG0576|consen 325 EM---TVSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM---KPRTA 390 (829)
T ss_pred cC---ChhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCccc---ccccC
Confidence 11 11122344555666777788999999987 568888 887766 478999999988776543 22233
Q ss_pred CcccccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCC
Q 010309 391 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQ 431 (513)
Q Consensus 391 ~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~ 431 (513)
.+++.++|||+...+.+..+.|+|++|+-..++.-|.+|-.
T Consensus 391 ~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 391 IGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred CCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 48999999999999999999999999987777777777644
No 486
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.29 E-value=8.5e-06 Score=77.23 Aligned_cols=140 Identities=17% Similarity=0.153 Sum_probs=85.6
Q ss_pred cccCc-eEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcC-CCcEeeeeeEEeeCCceEEEEeeccCCCHHHH
Q 010309 234 GDSKT-GGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLH-HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 311 (513)
Q Consensus 234 g~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 311 (513)
..|.. ..||+.... +..++||+..... ...+.+|+.++..+. +--+.+++++....+..++|||+++|.+|...
T Consensus 7 ~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 7 TEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred CCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 34444 789999764 5789999886543 345678888888883 44566777777766678999999999877643
Q ss_pred h-------------------ccCCCCCCCCCHH--HHHHHHH--------------------HHHHHHHHHhc----CCC
Q 010309 312 L-------------------HHIPRGGRSLDWA--MRMKVAT--------------------TLAQGIAFLHD----KVK 346 (513)
Q Consensus 312 l-------------------~~~~~~~~~l~~~--~~~~i~~--------------------qi~~~L~~LH~----~~~ 346 (513)
. +..+....++... ....... .+...+..|-. ...
T Consensus 83 ~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 162 (244)
T cd05150 83 WEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEED 162 (244)
T ss_pred hcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCc
Confidence 2 1111111111100 0000000 01111222211 113
Q ss_pred CCceEcCCCCCceEecCCCCeEEeccccccc
Q 010309 347 PHVVHRDIRASNVLLDEEFGAHLMGVGLSKF 377 (513)
Q Consensus 347 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~ 377 (513)
+.++|+|+.|.|||++.+..+.|+||+.+..
T Consensus 163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred eEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 4689999999999999987788999987753
No 487
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.28 E-value=4.4e-06 Score=86.10 Aligned_cols=141 Identities=16% Similarity=0.106 Sum_probs=90.8
Q ss_pred ceecccCceEEEEEEeCCCCEEEEEEecccchhc-------------------------------------HHHHHHHHH
Q 010309 231 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQR-------------------------------------KKEFYSEIG 273 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~~~E~~ 273 (513)
+-||.-+.|.||+|++++|+.||||+-++.-... +-+|.+|++
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 3579999999999999999999999876431100 012344544
Q ss_pred HHhhc----CCCc------EeeeeeEEeeCCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 010309 274 RFARL----HHPN------LVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 343 (513)
Q Consensus 274 ~l~~l----~h~n------Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~ 343 (513)
-..++ .|-+ |.+++-. -.....|+||||+|..+.+.-.- ....++...+..-+.+...-+-+-
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~--~st~RVLtME~~~G~~i~Dl~~i---~~~gi~~~~i~~~l~~~~~~qIf~-- 319 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWD--LSTKRVLTMEYVDGIKINDLDAI---DKRGISPHDILNKLVEAYLEQIFK-- 319 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhh--cCcceEEEEEecCCccCCCHHHH---HHcCCCHHHHHHHHHHHHHHHHHh--
Confidence 33333 3444 3333332 23467899999999877654321 123466555444444333222222
Q ss_pred CCCCCceEcCCCCCceEecC----CCCeEEecccccccCCcc
Q 010309 344 KVKPHVVHRDIRASNVLLDE----EFGAHLMGVGLSKFVPWE 381 (513)
Q Consensus 344 ~~~~~ivH~Dikp~NIll~~----~~~~kl~Dfg~~~~~~~~ 381 (513)
. |++|+|=.|.||+++. ++.+.+-|||+.......
T Consensus 320 ~---GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 320 T---GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred c---CCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 2 9999999999999984 667999999999876543
No 488
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.28 E-value=1e-05 Score=75.85 Aligned_cols=142 Identities=17% Similarity=0.203 Sum_probs=82.8
Q ss_pred eecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCC--cEeeeeeEEee---CCceEEEEeeccCC
Q 010309 232 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHP--NLVAVKGCCYD---HGDRYIVYEFVVNG 306 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--nIv~l~~~~~~---~~~~~lv~e~~~~g 306 (513)
.|+.|..+.||+....+ ..+++|..... .....+.+|..+++.+... .+.+++..... ....+++|+++++.
T Consensus 4 ~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~ 80 (239)
T PF01636_consen 4 PLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR 80 (239)
T ss_dssp EEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred cCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence 46899999999999866 69999998655 4556778888888888422 35566654322 33468999999998
Q ss_pred CHHH----------------Hhc---cCCCCCCCCCHHH---------HHHH------------HHHHHH-HHHHHhc--
Q 010309 307 PLDR----------------WLH---HIPRGGRSLDWAM---------RMKV------------ATTLAQ-GIAFLHD-- 343 (513)
Q Consensus 307 sL~~----------------~l~---~~~~~~~~l~~~~---------~~~i------------~~qi~~-~L~~LH~-- 343 (513)
++.. .+. ........+.... .... ...+.. .+..++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (239)
T PF01636_consen 81 PLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALL 160 (239)
T ss_dssp EHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhh
Confidence 8777 111 1100111111100 0000 111222 2333332
Q ss_pred --CCCCCceEcCCCCCceEec-CCCCeEEecccccc
Q 010309 344 --KVKPHVVHRDIRASNVLLD-EEFGAHLMGVGLSK 376 (513)
Q Consensus 344 --~~~~~ivH~Dikp~NIll~-~~~~~kl~Dfg~~~ 376 (513)
.....++|+|+.|.|||++ +++.+-|+||+.+.
T Consensus 161 ~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 161 PKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred ccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 1234799999999999999 55566799998764
No 489
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.20 E-value=3.8e-05 Score=69.64 Aligned_cols=134 Identities=18% Similarity=0.291 Sum_probs=95.5
Q ss_pred CceecccCceEEEEEEeCCCCEEEEEEecccc----------------hhcHHHHHHHHHHHhhcC------CCcEeeee
Q 010309 230 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSS----------------FQRKKEFYSEIGRFARLH------HPNLVAVK 287 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~E~~~l~~l~------h~nIv~l~ 287 (513)
..+||+|+.-.||. +++.....||+..... ....++..+|+.....+. +.+|.+++
T Consensus 6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred CcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 44789999999996 4567778899987664 122456667776666555 88999999
Q ss_pred eEEeeCCceEEEEeeccC------CCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCCCCceEe
Q 010309 288 GCCYDHGDRYIVYEFVVN------GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL 361 (513)
Q Consensus 288 ~~~~~~~~~~lv~e~~~~------gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dikp~NIll 361 (513)
|+.+++-..-+|+|.+.+ .+|.+++.+ ..++. ... ..+-.-..||-+. +|+.+||+|.||++
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~-----~~~~~-~~~---~~L~~f~~~l~~~---~Iv~~dl~~~NIv~ 151 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKE-----GGLTE-ELR---QALDEFKRYLLDH---HIVIRDLNPHNIVV 151 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHc-----CCccH-HHH---HHHHHHHHHHHHc---CCeecCCCcccEEE
Confidence 999999999999998753 368888853 33555 333 3334445677777 89999999999999
Q ss_pred cCCC----CeEEec-cccccc
Q 010309 362 DEEF----GAHLMG-VGLSKF 377 (513)
Q Consensus 362 ~~~~----~~kl~D-fg~~~~ 377 (513)
.... .+.|+| ||....
T Consensus 152 ~~~~~~~~~lvlIDG~G~~~~ 172 (199)
T PF10707_consen 152 QRRDSGEFRLVLIDGLGEKEL 172 (199)
T ss_pred EecCCCceEEEEEeCCCCccc
Confidence 5432 466666 555443
No 490
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.11 E-value=1.3e-05 Score=72.36 Aligned_cols=105 Identities=18% Similarity=0.178 Sum_probs=81.8
Q ss_pred HHHHHHHhhcCC-CcEeeeeeEEeeCCceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 010309 269 YSEIGRFARLHH-PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKP 347 (513)
Q Consensus 269 ~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~ 347 (513)
..|.-+|+.+++ +++++++|+| ..++|.||...+++...-... ..-...+|..+.+|+.++++.+.+|++....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l-~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRPL-SQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCcccccccccc-ccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 358888888865 6999999998 346899999877654210000 0113478999999999999999999985444
Q ss_pred CceEcCCCCCceEecCCCCeEEecccccccC
Q 010309 348 HVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 378 (513)
Q Consensus 348 ~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~~ 378 (513)
.+.-.|++|+|+-+++++++|++|.+.....
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 6888999999999999999999999887654
No 491
>PLN02876 acyl-CoA dehydrogenase
Probab=98.10 E-value=4e-05 Score=85.42 Aligned_cols=149 Identities=18% Similarity=0.266 Sum_probs=92.5
Q ss_pred ceecccCceEEEEEEeCCC---CEEEEEEecccc-hhcHHHHHHHHHHHhhcC-CCcE--eeeeeEEeeC---CceEEEE
Q 010309 231 RLLGDSKTGGTYSGILPDG---SRVAVKRLKRSS-FQRKKEFYSEIGRFARLH-HPNL--VAVKGCCYDH---GDRYIVY 300 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~nI--v~l~~~~~~~---~~~~lv~ 300 (513)
+.|+.|.+..+|+....++ ..+++|+..... ......+.+|+++|+.+. |++| ++++.++.+. +..|+||
T Consensus 44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVM 123 (822)
T PLN02876 44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIM 123 (822)
T ss_pred EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEE
Confidence 4568999999999887554 468888765432 223457889999999995 6654 7778877664 4679999
Q ss_pred eeccCCCHHH--------------------Hh---ccCCCC-------CCCCC--HHHHHHHH---------------HH
Q 010309 301 EFVVNGPLDR--------------------WL---HHIPRG-------GRSLD--WAMRMKVA---------------TT 333 (513)
Q Consensus 301 e~~~~gsL~~--------------------~l---~~~~~~-------~~~l~--~~~~~~i~---------------~q 333 (513)
||++|..+.+ .| +..... +.+.. ..++..+. ..
T Consensus 124 E~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~ 203 (822)
T PLN02876 124 EYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNPK 203 (822)
T ss_pred EecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCChh
Confidence 9998764321 11 111000 00111 11121111 11
Q ss_pred HHHHHHHHhcCCC--------CCceEcCCCCCceEecCC-CC-eEEecccccccCC
Q 010309 334 LAQGIAFLHDKVK--------PHVVHRDIRASNVLLDEE-FG-AHLMGVGLSKFVP 379 (513)
Q Consensus 334 i~~~L~~LH~~~~--------~~ivH~Dikp~NIll~~~-~~-~kl~Dfg~~~~~~ 379 (513)
+...+.+|..+.. +.+||+|+++.|||++.+ .. +-|.|+.++..-+
T Consensus 204 ~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~Gd 259 (822)
T PLN02876 204 MLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGN 259 (822)
T ss_pred HHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCC
Confidence 2334566644321 359999999999999853 33 5789999887543
No 492
>PRK10593 hypothetical protein; Provisional
Probab=98.10 E-value=7.2e-05 Score=72.93 Aligned_cols=76 Identities=9% Similarity=0.034 Sum_probs=56.2
Q ss_pred CceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCC---CcEeeeeeEEee---CCceEEEEeec
Q 010309 230 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHH---PNLVAVKGCCYD---HGDRYIVYEFV 303 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~nIv~l~~~~~~---~~~~~lv~e~~ 303 (513)
.+-||.|..+.||+....++ .+++|..+.. .....+..|+..|+.|.- -.++++++++.. .+..+||||++
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i 95 (297)
T PRK10593 19 VECISEQPYAALWALYDSQG-NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERL 95 (297)
T ss_pred eeecCCccceeEEEEEcCCC-CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEecc
Confidence 34579999999999987555 4777875431 134578899999988842 467888887754 36689999999
Q ss_pred cCCCH
Q 010309 304 VNGPL 308 (513)
Q Consensus 304 ~~gsL 308 (513)
++.++
T Consensus 96 ~G~~~ 100 (297)
T PRK10593 96 RGVSV 100 (297)
T ss_pred CCEec
Confidence 98765
No 493
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.07 E-value=4.1e-05 Score=66.60 Aligned_cols=127 Identities=17% Similarity=0.212 Sum_probs=87.7
Q ss_pred CceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCCcEee-eeeEEeeCCceEEEEeeccCCCH
Q 010309 230 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVA-VKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 230 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~-l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.+.|++|.+|.||++.+ .|..+|+|+-+.+ .....+..|+++|..+.-.++.+ ++.+ +..++.|||+.|-.|
T Consensus 27 ~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~y----g~~~i~me~i~G~~L 99 (201)
T COG2112 27 EKELAKGTTSVVYLGEW-RGGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFY----GEDFIRMEYIDGRPL 99 (201)
T ss_pred hhhhhcccccEEEEeec-cCceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEe----chhhhhhhhhcCcch
Confidence 34679999999999998 5668999987655 35678999999999997665543 3333 233466999988888
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceEcCCC-CCceEecCCCCeEEeccccccc
Q 010309 309 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIR-ASNVLLDEEFGAHLMGVGLSKF 377 (513)
Q Consensus 309 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dik-p~NIll~~~~~~kl~Dfg~~~~ 377 (513)
.+.-.. .+...+ ..++..---|-.. ||-|+.|. |..++|..+..+.|+||..|..
T Consensus 100 ~~~~~~-------~~rk~l----~~vlE~a~~LD~~---GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 100 GKLEIG-------GDRKHL----LRVLEKAYKLDRL---GIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhc-------ccHHHH----HHHHHHHHHHHHh---ccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 765431 122333 3344443344455 89999886 4555555555899999998874
No 494
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.98 E-value=2.5e-05 Score=85.32 Aligned_cols=197 Identities=18% Similarity=0.153 Sum_probs=136.8
Q ss_pred HHHHHHHHHhhcCCCcEeeeeeEEeeCCce----EEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 010309 267 EFYSEIGRFARLHHPNLVAVKGCCYDHGDR----YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLH 342 (513)
Q Consensus 267 ~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~----~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH 342 (513)
...-|+..+.++.|+|++.++.+..+.... .+..|++..-++...+.. -..++....+.+..++..||.|+|
T Consensus 228 ~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~----v~~i~~~~~r~~~~~~~~GL~~~h 303 (1351)
T KOG1035|consen 228 TTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS----VGSIPLETLRILHQKLLEGLAYLH 303 (1351)
T ss_pred HHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh----ccccCHHHHHHHHHHHhhhHHHHH
Confidence 345577788888999999999887654332 345577877788777754 356888899999999999999999
Q ss_pred cCCCCCceEcCCCCC---ceEecCCCCeEEe--cccccccCCccccccceeecCcccccccccccccCCCCc--hhhHHH
Q 010309 343 DKVKPHVVHRDIRAS---NVLLDEEFGAHLM--GVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTT--KSDVYS 415 (513)
Q Consensus 343 ~~~~~~ivH~Dikp~---NIll~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~--~sDvwS 415 (513)
+. ...|.-+..+ +--.+..+.+.++ ||+.+............. -+..+.|||......+.. ..|+|.
T Consensus 304 ~~---~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~---~~~~~~~~e~~~~~~~~~~r~~dL~~ 377 (1351)
T KOG1035|consen 304 SL---SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDL---LAEIRNADEDLKENTAKKSRLTDLWC 377 (1351)
T ss_pred Hh---ccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhc---CccccccccccccccchhhhhhHHHH
Confidence 98 6666655555 4445566666666 888888765443322221 455678888877665544 479999
Q ss_pred HHHHHHHHHcCCCCCCCCCccccchhHHhhhHHhhcccccccccccccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCC
Q 010309 416 FGVLLLEIVSGRRPAQAVDSVCWQSIFEWATPLVQSHRYLELLDPLISSLSSDIPEAGVVQKVVDLVYACTQHVPSMRPR 495 (513)
Q Consensus 416 lGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 495 (513)
+|..+..+..|..+-..... ....+ +........+...+|+..++++|++
T Consensus 378 lgll~~~~~~~~~i~~~~~~----------------------~~~~l--------~~~~~~~~~d~~~~~~~~~~~~Rl~ 427 (1351)
T KOG1035|consen 378 LGLLLLQLSQGEDISEKSAV----------------------PVSLL--------DVLSTSELLDALPKCLDEDSEERLS 427 (1351)
T ss_pred HHHHHhhhhhcCcccccccc----------------------hhhhh--------ccccchhhhhhhhhhcchhhhhccc
Confidence 99999999988765321110 00111 0011114778889999999999999
Q ss_pred HHHHHHHH
Q 010309 496 MSHVVHQL 503 (513)
Q Consensus 496 ~~evl~~L 503 (513)
+.+++...
T Consensus 428 ~~~ll~~~ 435 (1351)
T KOG1035|consen 428 ALELLTHP 435 (1351)
T ss_pred hhhhhhch
Confidence 99998644
No 495
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.95 E-value=6.7e-05 Score=70.68 Aligned_cols=71 Identities=14% Similarity=0.109 Sum_probs=44.4
Q ss_pred ecccCce-EEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCC---cEeeeeeEEeeC---CceEEEEeeccC
Q 010309 233 LGDSKTG-GTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHP---NLVAVKGCCYDH---GDRYIVYEFVVN 305 (513)
Q Consensus 233 lg~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~~~---~~~~lv~e~~~~ 305 (513)
|+.|+.. .||+. +..+++|..+.. .....+.+|+++|..+... .+.++++..... ...+++|++++|
T Consensus 5 ~~~gG~~n~vy~~----~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G 78 (235)
T cd05155 5 VDSGGTDNATFRL----GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEG 78 (235)
T ss_pred ccCCCcccceEEc----CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecC
Confidence 4666665 58875 345778875542 2345788999999887532 344444433322 234889999998
Q ss_pred CCHH
Q 010309 306 GPLD 309 (513)
Q Consensus 306 gsL~ 309 (513)
.++.
T Consensus 79 ~~l~ 82 (235)
T cd05155 79 ETAT 82 (235)
T ss_pred CCCC
Confidence 7763
No 496
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.81 E-value=0.00024 Score=66.85 Aligned_cols=72 Identities=13% Similarity=0.013 Sum_probs=47.6
Q ss_pred eecccCceEEEEEEeCC--CCEEEEEEecccchhcHHHHHHHHHHHhhcCC-CcEeeeeeEEeeCCceEEEEeeccCCCH
Q 010309 232 LLGDSKTGGTYSGILPD--GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHH-PNLVAVKGCCYDHGDRYIVYEFVVNGPL 308 (513)
Q Consensus 232 ~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lv~e~~~~gsL 308 (513)
.|..|-...+|+....+ +..|++|+...... ...+..+|+.++..+.. .-.+++++... ..++|||++|.++
T Consensus 5 ~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~-~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~l 79 (235)
T cd05157 5 RFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE-LIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRTL 79 (235)
T ss_pred EcCCcccceEEEEEcCCCCCCeEEEEEccCCcc-ceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCcC
Confidence 45788888999998764 67899997764321 12234578888888843 33344444332 2489999998765
No 497
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.80 E-value=0.00035 Score=70.30 Aligned_cols=75 Identities=17% Similarity=0.024 Sum_probs=54.0
Q ss_pred ceecccCceEEEEEEeCCC-CEEEEEEeccc------c-hhcHHHHHHHHHHHhhcC---CCcEeeeeeEEeeCCceEEE
Q 010309 231 RLLGDSKTGGTYSGILPDG-SRVAVKRLKRS------S-FQRKKEFYSEIGRFARLH---HPNLVAVKGCCYDHGDRYIV 299 (513)
Q Consensus 231 ~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~------~-~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~lv 299 (513)
+.||.|.+..||++...+| +.|+||+-... . ....+....|.+.|..+. -.++++++.+ +.+..++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence 3579999999999998777 48999985421 1 123456777888888762 3467777776 44667899
Q ss_pred EeeccCCC
Q 010309 300 YEFVVNGP 307 (513)
Q Consensus 300 ~e~~~~gs 307 (513)
||++++..
T Consensus 110 ME~L~~~~ 117 (401)
T PRK09550 110 MEDLSDHK 117 (401)
T ss_pred EecCCCcc
Confidence 99997643
No 498
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.80 E-value=0.00024 Score=69.84 Aligned_cols=161 Identities=15% Similarity=0.195 Sum_probs=91.2
Q ss_pred cCHHHHHHHhhCcccC----CceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCC--cEeeee
Q 010309 214 FTTEELRSITKNFSEG----NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHP--NLVAVK 287 (513)
Q Consensus 214 ~~~~~l~~~~~~~~~~----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--nIv~l~ 287 (513)
.+.+++..+...|... .+.++.|....+|+....+| .+++|+..... ..+.+..|+.++..|... .+++++
T Consensus 7 ~~~~~l~~~l~~y~~~~~~~i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i 83 (307)
T TIGR00938 7 VSDEEMSSFLDGYDLGELLSLKGIAEGVENSNYLLTTDVG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPV 83 (307)
T ss_pred CCHHHHHHHHHhcCCCCceeccccCCccccceEEEEeCCC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 3456777766665432 34567777789999876444 67889875532 234455677777776322 234443
Q ss_pred eEE------eeCCceEEEEeeccCCCHH-----------HHh---ccCCC----CCC---C-CCHHHHH-----------
Q 010309 288 GCC------YDHGDRYIVYEFVVNGPLD-----------RWL---HHIPR----GGR---S-LDWAMRM----------- 328 (513)
Q Consensus 288 ~~~------~~~~~~~lv~e~~~~gsL~-----------~~l---~~~~~----~~~---~-l~~~~~~----------- 328 (513)
... ...+..++++||++|..+. ..+ +.... ... . -.|....
T Consensus 84 ~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~ 163 (307)
T TIGR00938 84 KSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLE 163 (307)
T ss_pred cCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccC
Confidence 321 1235568999999885431 111 11000 000 0 0111100
Q ss_pred -HHHHHHHHHHHHHhc----CCCCCceEcCCCCCceEecCCCCeEEeccccccc
Q 010309 329 -KVATTLAQGIAFLHD----KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF 377 (513)
Q Consensus 329 -~i~~qi~~~L~~LH~----~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~ 377 (513)
.....+...++++.. ....+++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 164 ~~~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 164 AHMGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 011223344555542 2244899999999999999887678999998753
No 499
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.75 E-value=0.00043 Score=62.31 Aligned_cols=120 Identities=27% Similarity=0.392 Sum_probs=84.3
Q ss_pred CceecccCc-eEEEEEEeCCCCEEEEEEecc---cc-------h-----------hcHHHHHHHHHHHhhcC---CCcE-
Q 010309 230 NRLLGDSKT-GGTYSGILPDGSRVAVKRLKR---SS-------F-----------QRKKEFYSEIGRFARLH---HPNL- 283 (513)
Q Consensus 230 ~~~lg~G~~-g~Vy~~~~~~~~~vavK~~~~---~~-------~-----------~~~~~~~~E~~~l~~l~---h~nI- 283 (513)
-+.||.|.- |.||++.. +|+.+|+|++.. .. . .....|..|.+...+|+ +.++
T Consensus 42 lefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~e~~~ 120 (207)
T PF13095_consen 42 LEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGREGLW 120 (207)
T ss_pred eeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccccCce
Confidence 346799999 99999999 788999999432 00 0 11234778888777773 4566
Q ss_pred -eeeeeEEeeC------------------CceEEEEeeccCCCHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC
Q 010309 284 -VAVKGCCYDH------------------GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDK 344 (513)
Q Consensus 284 -v~l~~~~~~~------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~ 344 (513)
|+.+|+..-. ....||.||++... .+... -+.+|.+-|..+|..
T Consensus 121 Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-------------~~~~~----~~~~~~~dl~~~~k~ 183 (207)
T PF13095_consen 121 AVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-------------PLQIR----DIPQMLRDLKILHKL 183 (207)
T ss_pred EEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-------------ccchh----HHHHHHHHHHHHHHC
Confidence 8999987432 11257777765432 12222 345677778889999
Q ss_pred CCCCceEcCCCCCceEecCCCCeEEeccccc
Q 010309 345 VKPHVVHRDIRASNVLLDEEFGAHLMGVGLS 375 (513)
Q Consensus 345 ~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~ 375 (513)
+|+-+|+++.|.. .-+|+|||.+
T Consensus 184 ---gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 184 ---GIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred ---CeeeccCcccccc-----CCEEEecccC
Confidence 9999999999986 4589999865
No 500
>PRK05231 homoserine kinase; Provisional
Probab=97.68 E-value=0.0013 Score=65.05 Aligned_cols=160 Identities=16% Similarity=0.183 Sum_probs=86.1
Q ss_pred cCHHHHHHHhhCcccC----CceecccCceEEEEEEeCCCCEEEEEEecccchhcHHHHHHHHHHHhhcCCC--cEeeee
Q 010309 214 FTTEELRSITKNFSEG----NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHP--NLVAVK 287 (513)
Q Consensus 214 ~~~~~l~~~~~~~~~~----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--nIv~l~ 287 (513)
.+.+++..+...|... .+.|+.|....+|+....+| .+++|++... ..+.+..|+.++..|... .+.+.+
T Consensus 7 ls~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~~~---~~~~l~~~~~~l~~L~~~glpvP~~i 82 (319)
T PRK05231 7 VSDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQG-EYVLTLFERL---TAEDLPFFLGLMQHLAARGVPVPAPV 82 (319)
T ss_pred CCHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCC-cEEEEEeccC---ChHHhHHHHHHHHHHHHCCCCCCcce
Confidence 4566676666555431 23356777788999887555 6899987621 233444555555555211 122333
Q ss_pred e------EEeeCCceEEEEeeccCCCHH-----------HHhccCCCC----------CCCCCH-HHHH-----------
Q 010309 288 G------CCYDHGDRYIVYEFVVNGPLD-----------RWLHHIPRG----------GRSLDW-AMRM----------- 328 (513)
Q Consensus 288 ~------~~~~~~~~~lv~e~~~~gsL~-----------~~l~~~~~~----------~~~l~~-~~~~----------- 328 (513)
. +....+..++++||++|..+. ..|.+.... ...+.+ ....
T Consensus 83 ~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (319)
T PRK05231 83 ARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQ 162 (319)
T ss_pred eCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhH
Confidence 2 112245678999999886431 111111000 001111 1111
Q ss_pred -HHHHH-HHHHHHHHhcC----CCCCceEcCCCCCceEecCCCCeEEeccccccc
Q 010309 329 -KVATT-LAQGIAFLHDK----VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF 377 (513)
Q Consensus 329 -~i~~q-i~~~L~~LH~~----~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~~~~ 377 (513)
..+.+ +...++.+... ...+++|+|+.|.||+++.+...-|+||+.+..
T Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 163 AALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred HHHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 01111 11222333211 344899999999999999765568999998864
Done!