Your job contains 1 sequence.
>010311
MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF
CHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRM
LYCHDFPATDLAYDRNQYAAHASERDDTSSESSSFLQDRLYSESDKPYANETSRFVRQNG
DVTPVRCNIGRSKEYKPSGYLKVKGESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPG
AFESPSGDPVNEPFYVGNSRWSNSPEVPEIDKPRALGTRYEVDSSKMDLQDSYIDENLNS
KRSDYAGTKSHNQLKQKSPLLHYSNFSPHQNSSLNAYEDSTPVYDGNHCYSLSSKHDAEW
MGLNSVMNHHEPHGGKTNSEEAKPLLNDNHVVSSKMVRNSNYFTRPSNFTLGISKSLDAK
DKGTSTKMAKVKKLYKEKKAIKGLRDPVSVKTHLNNEMNVVKRLKGELPQRDYIAKASYA
EIPRWTNPIKGSAAEMPSSFSEDETAETNSSME
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010311
(513 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2032505 - symbol:HB-1 "homeobox-1" species:370... 166 3.8e-16 3
TAIR|locus:2167628 - symbol:RLT2 "RINGLET 2" species:3702... 144 2.0e-12 3
UNIPROTKB|F1MZR4 - symbol:LOC516179 "Uncharacterized prot... 124 5.1e-07 1
UNIPROTKB|F1NYF2 - symbol:NKX6-2 "Uncharacterized protein... 113 7.8e-06 1
UNIPROTKB|F1P4U9 - symbol:HOXD8 "Homeobox protein Hox-D8"... 110 1.6e-05 1
UNIPROTKB|Q02814 - symbol:CHOX-CAD2 "Homeobox protein CHO... 110 1.6e-05 1
UNIPROTKB|F1MCF6 - symbol:CDX1 "Uncharacterized protein" ... 109 2.1e-05 1
RGD|621233 - symbol:Cdx1 "caudal type homeo box 1" specie... 109 2.1e-05 1
UNIPROTKB|Q05095 - symbol:Cdx1 "Homeobox protein CDX-1" s... 109 2.1e-05 1
ZFIN|ZDB-GENE-010108-2 - symbol:vent "ventral expressed h... 118 2.3e-05 1
WB|WBGene00003024 - symbol:lin-39 species:6239 "Caenorhab... 126 2.5e-05 1
ZFIN|ZDB-GENE-040718-178 - symbol:nkx6.1 "NK6 transcripti... 127 3.3e-05 1
UNIPROTKB|F1NHM4 - symbol:CDX4 "Uncharacterized protein" ... 107 3.4e-05 1
UNIPROTKB|D6RAR5 - symbol:D6RAR5 "Uncharacterized protein... 107 3.4e-05 1
UNIPROTKB|Q9C056 - symbol:NKX6-2 "Homeobox protein Nkx-6.... 125 4.2e-05 1
WB|WBGene00003102 - symbol:mab-5 species:6239 "Caenorhabd... 120 5.1e-05 1
UNIPROTKB|F1P4U7 - symbol:HOXD11 "Homeobox protein Hox-D1... 105 5.7e-05 1
UNIPROTKB|F6R243 - symbol:CDX1 "Homeobox protein CDX-1" s... 105 5.7e-05 1
UNIPROTKB|J9P485 - symbol:EMX2 "Uncharacterized protein" ... 104 7.3e-05 1
UNIPROTKB|A8MWF9 - symbol:MEOX1 "Homeobox protein MOX-1" ... 103 9.3e-05 1
UNIPROTKB|F1RSD4 - symbol:PRRX1 "Uncharacterized protein"... 103 9.3e-05 1
UNIPROTKB|J9P8I3 - symbol:NKX6-2 "Uncharacterized protein... 122 9.6e-05 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 110 9.8e-05 1
RGD|1307280 - symbol:Nkx6-2 "NK6 homeobox 2" species:1011... 121 0.00012 1
MGI|MGI:88360 - symbol:Cdx1 "caudal type homeobox 1" spec... 109 0.00012 2
ZFIN|ZDB-GENE-010108-1 - symbol:vox "ventral homeobox" sp... 120 0.00014 1
UNIPROTKB|P24340 - symbol:HOXD9 "Homeobox protein Hox-D9"... 101 0.00015 1
UNIPROTKB|P24341 - symbol:HOXD10 "Homeobox protein Hox-D1... 101 0.00015 1
UNIPROTKB|I3LF97 - symbol:I3LF97 "Uncharacterized protein... 101 0.00015 1
RGD|1595784 - symbol:Hoxc9 "homeobox C9" species:10116 "R... 101 0.00015 1
UNIPROTKB|P18866 - symbol:Hoxc8 "Homeobox protein Hox-C8"... 101 0.00015 1
WB|WBGene00000430 - symbol:ceh-5 species:6239 "Caenorhabd... 101 0.00015 1
UNIPROTKB|P87381 - symbol:POU2F3 "POU" species:9031 "Gall... 108 0.00019 1
UNIPROTKB|F1NHF8 - symbol:CDX4 "Uncharacterized protein" ... 100 0.00020 1
UNIPROTKB|I3LRX4 - symbol:I3LRX4 "Uncharacterized protein... 100 0.00020 1
UNIPROTKB|P97273 - symbol:TITF1 "Thyroid transcription fa... 100 0.00020 1
UNIPROTKB|G3V567 - symbol:PAX6 "Paired box protein Pax-6"... 89 0.00021 2
UNIPROTKB|F1NNC8 - symbol:TLX1 "T-cell leukemia homeobox ... 102 0.00024 1
UNIPROTKB|F1NE15 - symbol:LOC100858551 "Uncharacterized p... 99 0.00025 1
UNIPROTKB|F1NVB2 - symbol:TLX3 "T-cell leukemia homeobox ... 99 0.00025 1
UNIPROTKB|H9L2H7 - symbol:Gga.20677 "Uncharacterized prot... 99 0.00025 1
UNIPROTKB|H9L2H8 - symbol:Gga.20677 "Uncharacterized prot... 99 0.00025 1
FB|FBgn0051481 - symbol:pb "proboscipedia" species:7227 "... 109 0.00027 3
UNIPROTKB|F1NZJ4 - symbol:HOXD8 "Homeobox protein Hox-D8"... 110 0.00029 1
ZFIN|ZDB-GENE-980526-330 - symbol:cdx4 "caudal type homeo... 118 0.00032 1
RGD|1587253 - symbol:Hoxa7 "homeobox A7" species:10116 "R... 98 0.00032 1
UNIPROTKB|P09634 - symbol:Hoxa7 "Homeobox protein Hox-A7"... 98 0.00032 1
FB|FBgn0015524 - symbol:otp "orthopedia" species:7227 "Dr... 120 0.00034 1
UNIPROTKB|E1BGM6 - symbol:HOXB2 "Uncharacterized protein"... 102 0.00035 3
DICTYBASE|DDB_G0284293 - symbol:hbx10 "putative homeobox ... 109 0.00035 2
UNIPROTKB|F1MJX0 - symbol:CDX2 "Uncharacterized protein" ... 102 0.00036 1
FB|FBgn0040318 - symbol:HGTX "HGTX" species:7227 "Drosoph... 122 0.00037 1
UNIPROTKB|E2RRG1 - symbol:NKX6-1 "Uncharacterized protein... 117 0.00037 1
UNIPROTKB|F1LWY9 - symbol:F1LWY9 "Uncharacterized protein... 111 0.00038 1
UNIPROTKB|F6Q274 - symbol:F6Q274 "Uncharacterized protein... 106 0.00040 2
UNIPROTKB|H9L184 - symbol:Gga.48067 "Uncharacterized prot... 97 0.00041 1
UNIPROTKB|F6USR4 - symbol:MEOX2 "Uncharacterized protein"... 106 0.00044 1
UNIPROTKB|F1NNJ9 - symbol:NKX6-2 "Uncharacterized protein... 116 0.00044 1
UNIPROTKB|P14839 - symbol:HOXB6 "Homeobox protein Hox-B6"... 96 0.00053 1
UNIPROTKB|I3L383 - symbol:HOXB8 "Homeobox protein Hox-B8"... 96 0.00053 1
UNIPROTKB|H0YJ33 - symbol:CDX2 "Homeobox protein CDX-2" s... 106 0.00053 1
UNIPROTKB|P51783 - symbol:HOXA9 "Homeobox protein Hox-A9"... 107 0.00055 1
UNIPROTKB|Q60554 - symbol:NKX6-1 "Homeobox protein Nkx-6.... 117 0.00059 1
MGI|MGI:1206039 - symbol:Nkx6-1 "NK6 homeobox 1" species:... 117 0.00059 1
RGD|69318 - symbol:Nkx6-1 "NK6 homeobox 1" species:10116 ... 117 0.00059 1
UNIPROTKB|E1BNQ7 - symbol:NKX6-1 "Uncharacterized protein... 117 0.00060 1
UNIPROTKB|P78426 - symbol:NKX6-1 "Homeobox protein Nkx-6.... 117 0.00060 1
UNIPROTKB|P23459 - symbol:HOXD8 "Homeobox protein Hox-D8"... 110 0.00062 1
WB|WBGene00000437 - symbol:ceh-13 species:6239 "Caenorhab... 111 0.00065 1
UNIPROTKB|P15142 - symbol:CHOX-7 "Homeobox protein CHOX-7... 95 0.00067 1
UNIPROTKB|F1SHT6 - symbol:F1SHT6 "Uncharacterized protein... 95 0.00067 1
UNIPROTKB|G3ECA1 - symbol:HoxA10 "Homebox A10" species:98... 95 0.00067 1
RGD|1586211 - symbol:Hoxb8 "homeo box B8" species:10116 "... 95 0.00067 1
RGD|1588601 - symbol:Hoxd3 "homeo box D3" species:10116 "... 95 0.00067 1
UNIPROTKB|P18867 - symbol:Hoxd3 "Homeobox protein Hox-D3"... 95 0.00067 1
UNIPROTKB|I3L5U0 - symbol:POU2F3 "Uncharacterized protein... 111 0.00071 2
UNIPROTKB|F1P2W4 - symbol:NKX6-2 "Uncharacterized protein... 113 0.00075 1
RGD|1305100 - symbol:Pbx4 "pre-B-cell leukemia homeobox 4... 115 0.00077 2
UNIPROTKB|F1NE14 - symbol:LOC100858551 "Uncharacterized p... 107 0.00079 1
UNIPROTKB|Q98924 - symbol:HOXA9 "Homeobox protein Hox-A9"... 107 0.00079 1
UNIPROTKB|Q90Z54 - symbol:CDXB "Uncharacterized protein" ... 113 0.00085 1
UNIPROTKB|F1NC59 - symbol:F1NC59 "Uncharacterized protein... 94 0.00086 1
RGD|1586210 - symbol:Hoxc4 "homeo box C4" species:10116 "... 94 0.00086 1
UNIPROTKB|P18865 - symbol:Hoxc4 "Homeobox protein Hox-C4"... 94 0.00086 1
TAIR|locus:2030913 - symbol:HDG12 "homeodomain GLABROUS 1... 119 0.00092 1
WB|WBGene00004011 - symbol:pha-2 species:6239 "Caenorhabd... 106 0.00097 1
>TAIR|locus:2032505 [details] [associations]
symbol:HB-1 "homeobox-1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 EMBL:CP002684 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010228
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 IPI:IPI00539857
RefSeq:NP_174164.2 UniGene:At.27788 PRIDE:F4HY56
EnsemblPlants:AT1G28420.1 GeneID:839740 KEGG:ath:AT1G28420
OMA:ESHLRIM Uniprot:F4HY56
Length = 1705
Score = 166 (63.5 bits), Expect = 3.8e-16, Sum P(3) = 3.8e-16
Identities = 27/55 (49%), Positives = 44/55 (80%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ KTP Q+ LEK Y+E KYP+E +++++E++ L+++Q+ WFCHRRLK+K+
Sbjct: 42 KRQMKTPFQLETLEKVYSEEKYPSEATRAELSEKLDLSDRQLQMWFCHRRLKDKK 96
Score = 125 (49.1 bits), Expect = 3.8e-16, Sum P(3) = 3.8e-16
Identities = 34/86 (39%), Positives = 46/86 (53%)
Query: 162 SESD-KPYANETSRFVRQNGDVTPVRCNIGRSKEY-KPSGYLKVKGESENAAISAVKRQL 219
SES PY+N F +G + R + + KPS Y + AI ++ QL
Sbjct: 137 SESGCSPYSNSRRNFA--SGSSSS-RAELDEYETMGKPS-YESRLSTMVHRAIVCIEAQL 192
Query: 220 GRHYREDGPPLGVDFDPLPPGAFESP 245
G R+DGP LG++FDPLPPGAF +P
Sbjct: 193 GEPLRDDGPILGMEFDPLPPGAFGTP 218
Score = 69 (29.3 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 38/172 (22%), Positives = 70/172 (40%)
Query: 206 ESENAAISAVKRQLGRHYREDGP----PLGVDFDPLPPGAFESPSGDPVNEPFYVGNSRW 261
E A +A+K+Q+ + D L +D L ES G P+ + +
Sbjct: 975 EDRMEAANALKKQMWAEAQLDNSCMRDVLKLDLQNLASSKTESTIGLPIIQSSTRERDSF 1034
Query: 262 SNSPEVPEIDKPRALGTRYEVDSSKMDLQDSYIDENLNSKRSDYAGTKSHNQLKQ----K 317
P +D+ + L D K + + I+++ N + +YA +S +QLK K
Sbjct: 1035 DRDPS-QLLDETKPLEDLSN-DLHKSSAERALINQDANISQENYASKRSRSQLKSYIGHK 1092
Query: 318 SPLLH-YSNFSPHQNSSLNAY-EDSTPVYDGNHCYSLS--SKHDAEWMGLNS 365
+ ++ Y + Q+ N Y + V + C L HD +W+ ++S
Sbjct: 1093 AEEVYPYRSLPLGQDRRHNRYWHFAVSVSKSDPCSRLLFVELHDGKWLLIDS 1144
Score = 46 (21.3 bits), Expect = 3.8e-16, Sum P(3) = 3.8e-16
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 452 THLNNEM-NVVKRLKGELPQRDYIAKASYAEIPR-WTNPIKGSAAEMPSSFSEDETAETN 509
+HL N M N+V+ E+ + + + ++ +I W +A E P ED ET
Sbjct: 1549 SHLVNRMANIVRPKSEEVEEDEEEEEQTFRDINEDW------AAGETPREMEEDWANETP 1602
Query: 510 SSM 512
+ M
Sbjct: 1603 NRM 1605
Score = 38 (18.4 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 264 SPEVPEIDKPRALGTRYEVDSSKMDLQDSYIDENLNSKRSDYAGTKS 310
S V E+ P A G+ E DS +S NS+R+ +G+ S
Sbjct: 113 SASVNEL--PAAAGSVPEQDSRSDSGSESGCSPYSNSRRNFASGSSS 157
>TAIR|locus:2167628 [details] [associations]
symbol:RLT2 "RINGLET 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 EMBL:AB005239 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0010228 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00536771 RefSeq:NP_199231.1 UniGene:At.24988
ProteinModelPortal:Q9FFH1 SMR:Q9FFH1 PRIDE:Q9FFH1
EnsemblPlants:AT5G44180.1 GeneID:834441 KEGG:ath:AT5G44180
TAIR:At5g44180 HOGENOM:HOG000241585 InParanoid:Q9FFH1 OMA:AFHDYDP
PhylomeDB:Q9FFH1 ProtClustDB:CLSN2715588 ArrayExpress:Q9FFH1
Genevestigator:Q9FFH1 Uniprot:Q9FFH1
Length = 1694
Score = 144 (55.7 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 24/59 (40%), Positives = 41/59 (69%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
E KR+ KT AQ+ LE Y+ YP+E +++ ++ ++ L+++Q+ WFCHRRLKE++
Sbjct: 16 ESKSKRKMKTAAQLEVLENTYSAEPYPSEAIRADLSVKLNLSDRQLQMWFCHRRLKERK 74
Score = 115 (45.5 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
+E AI V+ QLG R++GP LG++FDPLPPGAF P
Sbjct: 136 AEVRAIGYVEAQLGERLRDNGPVLGMEFDPLPPGAFGMP 174
Score = 43 (20.2 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 444 LRDPVSVKTHLNNEMNVVKRLKGELPQRDYIAKASYAEIPRWTNPIKGSAA 494
L+D S + + E N+++ L + + A+Y + WT+P G +
Sbjct: 1415 LKDKES-EDFVGLETNILRNLHEKDVMETPVQVAAYKQEENWTDPGLGGVS 1464
>UNIPROTKB|F1MZR4 [details] [associations]
symbol:LOC516179 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0045687 "positive regulation of glial cell differentiation"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0022010 "central nervous system
myelination" evidence=IEA] [GO:0021913 "regulation of transcription
from RNA polymerase II promoter involved in ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0010455
"positive regulation of cell fate commitment" evidence=IEA]
[GO:0010454 "negative regulation of cell fate commitment"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0050885 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0022010 GO:GO:0031018 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0021913 GO:GO:0045687
GO:GO:0045686 GO:GO:0010455 GO:GO:0010454 GO:GO:0021912
EMBL:DAAA02046415 IPI:IPI00838790 Ensembl:ENSBTAT00000045009
OMA:WDDEKIT Uniprot:F1MZR4
Length = 151
Score = 124 (48.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 41/132 (31%), Positives = 65/132 (49%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 18 LDKDGKKKHSRPTFSGQQTFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 77
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDY-RSIDPR---EVQSRM 120
K KR + + A +QD + ++ GS D +Y R +DP E +R+
Sbjct: 78 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDD-------EYNRPLDPNWDDEKITRL 130
Query: 121 LYCHDFPATDLA 132
L H P LA
Sbjct: 131 LKKHRAPNLALA 142
>UNIPROTKB|F1NYF2 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454
EMBL:AADN02047157 EMBL:AADN02047158 IPI:IPI00600245
Ensembl:ENSGALT00000018301 Uniprot:F1NYF2
Length = 133
Score = 113 (44.8 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 36/120 (30%), Positives = 61/120 (50%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 17 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 76
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCH 124
K KR + + A + D + +++ S +D K D S D E +R+L H
Sbjct: 77 KWRKRHAAEMASAKKKHDSETEKLKE--SSDNEDDDEYNKPLDPNSDD--EKITRLLKKH 132
>UNIPROTKB|F1P4U9 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 IPI:IPI00576774 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 Ensembl:ENSGALT00000015083
ArrayExpress:F1P4U9 Uniprot:F1P4U9
Length = 148
Score = 110 (43.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ +GLTE+QV WF +RR+K K+ + + F +Q+
Sbjct: 66 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPASKQE 125
Query: 83 RSSGVIQDRGSGLRQDSCGS 102
G + L D S
Sbjct: 126 GKEGEAKKETHDLEDDRAES 145
>UNIPROTKB|Q02814 [details] [associations]
symbol:CHOX-CAD2 "Homeobox protein CHOX-CAD2" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG291290 OrthoDB:EOG42FSK7
EMBL:L06621 IPI:IPI00576916 PIR:PC1228 ProteinModelPortal:Q02814
SMR:Q02814 InParanoid:Q02814 Uniprot:Q02814
Length = 60
Score = 110 (43.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 15 KRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
K +Y+ T Q + LEK ++ ++Y T KS++A +GL+E+QV WF +RR KE+++
Sbjct: 1 KEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKSWFQNRRAKERKI 59
>UNIPROTKB|F1MCF6 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
OMA:MTIKEEY Uniprot:F1MCF6
Length = 118
Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 15 KRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K +Y+ T Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE++++
Sbjct: 7 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN 66
>RGD|621233 [details] [associations]
symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
ArrayExpress:Q05095 Genevestigator:Q05095
GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 15 KRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K +Y+ T Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE++++
Sbjct: 5 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN 64
>UNIPROTKB|Q05095 [details] [associations]
symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 15 KRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K +Y+ T Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE++++
Sbjct: 5 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN 64
>ZFIN|ZDB-GENE-010108-2 [details] [associations]
symbol:vent "ventral expressed homeobox" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI] [GO:0042661
"regulation of mesodermal cell fate specification" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-010108-2 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0009953 HSSP:P06602 GO:GO:0042661 eggNOG:NOG150160
GeneTree:ENSGT00610000086217 OrthoDB:EOG44TP97 EMBL:CABZ01072677
EMBL:AF255044 EMBL:AF277077 IPI:IPI00511939 RefSeq:NP_571775.1
UniGene:Dr.106743 STRING:Q9DGM9 Ensembl:ENSDART00000017456
GeneID:64810 KEGG:dre:64810 CTD:64810 HOGENOM:HOG000206355
InParanoid:Q9DGM9 OMA:RRMRTKF NextBio:20901999 Uniprot:Q9DGM9
Length = 170
Score = 118 (46.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/70 (35%), Positives = 45/70 (64%)
Query: 1 MHSEENKVSLEKNIKRRYK-TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
+ S++++V +N + R K T Q+ LEK +++H+Y + ++AE++ L+E QV W
Sbjct: 52 VESDDSEVEAGQNRRVRTKFTCDQISGLEKSFSKHRYLGATQRRKIAEKLHLSETQVKTW 111
Query: 60 FCHRRLKEKR 69
F +RR+K KR
Sbjct: 112 FQNRRMKLKR 121
>WB|WBGene00003024 [details] [associations]
symbol:lin-39 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040026
"positive regulation of vulval development" evidence=IGI;IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0016477
"cell migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0040025 "vulval development" evidence=IEP]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0051302 "regulation of cell division" evidence=IMP] [GO:0045026
"plasma membrane fusion" evidence=IMP] [GO:0007265 "Ras protein
signal transduction" evidence=IEP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0018991 GO:GO:0007411 GO:GO:0007265 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311
GO:GO:0040025 GO:GO:0040027 GO:GO:0040026 GO:GO:0042659
GO:GO:0051302 EMBL:FO080423 GeneTree:ENSGT00700000104189
GO:GO:0045026 eggNOG:NOG236516 EMBL:L19639 EMBL:L19248 PIR:B40722
RefSeq:NP_001021164.1 UniGene:Cel.19645 ProteinModelPortal:P34684
SMR:P34684 IntAct:P34684 MINT:MINT-114843 STRING:P34684
EnsemblMetazoa:C07H6.7.1 EnsemblMetazoa:C07H6.7.2 GeneID:176068
KEGG:cel:CELE_C07H6.7 UCSC:C07H6.7.2 CTD:176068 WormBase:C07H6.7
HOGENOM:HOG000113332 InParanoid:P34684 OMA:KEFHTHK NextBio:890972
Uniprot:P34684
Length = 253
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+HS EK + Y T QV+ LEK ++ HKY T + + +VA + LTE+QV WF
Sbjct: 155 VHSTTGGSRGEKRQRTAY-TRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWF 213
Query: 61 CHRRLKEKRLSVDE 74
+RR+K K+ + D+
Sbjct: 214 QNRRMKHKKENKDK 227
>ZFIN|ZDB-GENE-040718-178 [details] [associations]
symbol:nkx6.1 "NK6 transcription factor related,
locus 1 (Drosophila)" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0045165
"cell fate commitment" evidence=IMP] [GO:0003310 "pancreatic A cell
differentiation" evidence=IGI;IMP] [GO:0003309 "type B pancreatic
cell differentiation" evidence=IGI;IMP] [GO:0031018 "endocrine
pancreas development" evidence=IGI;IMP] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IGI;IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-040718-178 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0021522 GO:GO:0000976 GO:GO:0045165 GO:GO:0003310
GO:GO:0003309 HOGENOM:HOG000060127 HOVERGEN:HBG070987 KO:K08030
EMBL:BC076337 IPI:IPI00997948 RefSeq:NP_001002475.1
UniGene:Dr.79658 ProteinModelPortal:Q6DGK5 SMR:Q6DGK5 GeneID:436748
KEGG:dre:436748 CTD:436748 InParanoid:Q6DGK5 NextBio:20831186
Uniprot:Q6DGK5
Length = 312
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 36/115 (31%), Positives = 61/115 (53%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+N V L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 175 QNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 234
Query: 61 CHRRLK-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDY-RSIDP 113
+RR K KR + + A +QD + + +G+ +D DY + +DP
Sbjct: 235 QNRRTKWRKRHAAEMASAKKKQDSETERL--KGASENEDD-----DDDYNKPLDP 282
>UNIPROTKB|F1NHM4 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
Uniprot:F1NHM4
Length = 60
Score = 107 (42.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 15 KRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
K +Y+ T Q + LEK ++ ++Y T KS++A +GL+E+QV WF +RR KE+++
Sbjct: 1 KEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKERKI 59
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 107 (42.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 49 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 108
Query: 75 A 75
A
Sbjct: 109 A 109
>UNIPROTKB|Q9C056 [details] [associations]
symbol:NKX6-2 "Homeobox protein Nkx-6.2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0050885 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0022010
GO:GO:0031018 GO:GO:0000976 EMBL:CH471211 GO:GO:0021913
GO:GO:0045687 HSSP:P13297 EMBL:AL392043 GO:GO:0045686 GO:GO:0010455
GO:GO:0010454 eggNOG:NOG265304 HOGENOM:HOG000060127
HOVERGEN:HBG070987 OrthoDB:EOG4JT064 GO:GO:0021912 EMBL:AF184215
EMBL:BC101635 EMBL:BC104823 IPI:IPI00028161 RefSeq:NP_796374.1
UniGene:Hs.134013 ProteinModelPortal:Q9C056 SMR:Q9C056
STRING:Q9C056 PhosphoSite:Q9C056 DMDM:158564033 PRIDE:Q9C056
Ensembl:ENST00000368592 GeneID:84504 KEGG:hsa:84504 UCSC:uc001llr.2
CTD:84504 GeneCards:GC10M134598 HGNC:HGNC:19321 MIM:605955
neXtProt:NX_Q9C056 PharmGKB:PA134896334 InParanoid:Q9C056 KO:K09350
OMA:GPAGFKA PhylomeDB:Q9C056 GenomeRNAi:84504 NextBio:74300
Bgee:Q9C056 CleanEx:HS_NKX6-2 Genevestigator:Q9C056 Uniprot:Q9C056
Length = 277
Score = 125 (49.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 31/94 (32%), Positives = 52/94 (55%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 142 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 201
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQD 98
K KR +V+ A +QD + ++ GS D
Sbjct: 202 KWRKRHAVEMASAKKKQDSDAEKLKVGGSDAEDD 235
>WB|WBGene00003102 [details] [associations]
symbol:mab-5 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0051179 "localization" evidence=IMP]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IGI;IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 KO:K09311 GO:GO:0000122
GO:GO:0030334 GO:GO:0045138 eggNOG:NOG238660 GO:GO:0050679
GO:GO:0042659 GO:GO:0051179 EMBL:FO080429
GeneTree:ENSGT00700000104189 EMBL:M22751 EMBL:AF277990 PIR:S44615
RefSeq:NP_498695.1 UniGene:Cel.18387 ProteinModelPortal:P10038
SMR:P10038 IntAct:P10038 MINT:MINT-1123728 STRING:P10038
EnsemblMetazoa:C08C3.3 GeneID:176091 KEGG:cel:CELE_C08C3.3
UCSC:C08C3.3 CTD:176091 WormBase:C08C3.3 InParanoid:P10038
OMA:TSANFGE NextBio:891072 Uniprot:P10038
Length = 200
Score = 120 (47.3 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K ++ Y +Q + LEK ++ HKY T + + +++E + LTE+QV WF +RR+K K+ +
Sbjct: 118 KRTRQTYSR-SQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKKEA 176
Query: 72 VDEAFVGGRQDRSSGVIQD 90
E GG + QD
Sbjct: 177 KGE---GGSNESDEESNQD 192
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 105 (42.0 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 3 SEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCH 62
S + V KR T Q+ LE+ + + Y +E + Q++ + LT++QV WF +
Sbjct: 28 SNSSAVPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQN 87
Query: 63 RRLKEKRLSVD--EAFVG 78
RR+KEK+L+ D + F G
Sbjct: 88 RRMKEKKLNRDRLQYFTG 105
>UNIPROTKB|F6R243 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 EMBL:AADN02028624 IPI:IPI00819151
ProteinModelPortal:F6R243 Ensembl:ENSGALT00000040457 Uniprot:F6R243
Length = 117
Score = 105 (42.0 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 15 KRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K +Y+ T Q + LEK ++ +Y T K+++A +GLTE+QV WF +RR KE++++
Sbjct: 6 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKERKVN 65
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 104 (41.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K I+ + +P+Q++ LE + ++ Y + Q+A + LTE QV WF +RR K KR
Sbjct: 37 KRIRTAF-SPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQK 95
Query: 72 VDE 74
++E
Sbjct: 96 LEE 98
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 103 (41.3 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 27/88 (30%), Positives = 44/88 (50%)
Query: 3 SEENKVSLEKNIKRRYK----TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
++EN+ E + K R + T Q+ LE + H Y T + ++A + L+E+QV
Sbjct: 43 NQENRGKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKV 102
Query: 59 WFCHRRLKEKRLSVDEAFVGGRQDRSSG 86
WF +RR+K KR+ + QD G
Sbjct: 103 WFQNRRMKWKRVKGGQPISPNGQDPEDG 130
>UNIPROTKB|F1RSD4 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104279
EMBL:CU138499 Ensembl:ENSSSCT00000006879 Uniprot:F1RSD4
Length = 141
Score = 103 (41.3 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 21/69 (30%), Positives = 40/69 (57%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
++SEE K ++ + + + +Q+ ALE+ + YP ++ +A ++ LTE +V WF
Sbjct: 6 LNSEEKKKRKQRRNRTTFNS-SQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWF 64
Query: 61 CHRRLKEKR 69
+RR K +R
Sbjct: 65 QNRRAKFRR 73
>UNIPROTKB|J9P8I3 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 OMA:GPAGFKA EMBL:AAEX03015714
Ensembl:ENSCAFT00000048528 Uniprot:J9P8I3
Length = 281
Score = 122 (48.0 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 40/128 (31%), Positives = 65/128 (50%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 147 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 206
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDY-RSIDPR---EVQSRM 120
K KR + + A +QD + ++ GS D +Y R +DP E +R+
Sbjct: 207 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDD-------EYNRPLDPNSDDEKITRL 259
Query: 121 LYCHDFPA 128
L H PA
Sbjct: 260 LKKHK-PA 266
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 110 (43.8 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 5 ENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
EN S KN K+R T QV LEK + +K ++K Q++ Q+GL ++QV+ WF ++R
Sbjct: 2 ENSQSQGKNKKKRL-TQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKR 60
Query: 65 LKEKRLSVD 73
+ K S++
Sbjct: 61 ARFKTQSLE 69
>RGD|1307280 [details] [associations]
symbol:Nkx6-2 "NK6 homeobox 2" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0010454 "negative regulation of
cell fate commitment" evidence=IEA;ISO] [GO:0010455 "positive
regulation of cell fate commitment" evidence=IEA;ISO] [GO:0021912
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord motor neuron fate specification"
evidence=IEA;ISO] [GO:0021913 "regulation of transcription from RNA
polymerase II promoter involved in ventral spinal cord interneuron
specification" evidence=IEA;ISO] [GO:0022010 "central nervous
system myelination" evidence=IEA;ISO] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0031018 "endocrine pancreas
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045686 "negative regulation of glial
cell differentiation" evidence=IEA;ISO] [GO:0045687 "positive
regulation of glial cell differentiation" evidence=IEA;ISO]
[GO:0048709 "oligodendrocyte differentiation" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:1307280
GO:GO:0005634 GO:GO:0050885 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0022010 GO:GO:0031018 GO:GO:0000976 EMBL:CH473953
GeneTree:ENSGT00680000099625 GO:GO:0021913 GO:GO:0045687
GO:GO:0045686 GO:GO:0010455 GO:GO:0010454 OrthoDB:EOG4JT064
GO:GO:0021912 CTD:84504 KO:K09350 OMA:GPAGFKA IPI:IPI00779623
RefSeq:NP_001101028.1 UniGene:Rn.222182 SMR:D3ZZX2
Ensembl:ENSRNOT00000054887 GeneID:309095 KEGG:rno:309095
UCSC:RGD:1307280 NextBio:660104 Uniprot:D3ZZX2
Length = 277
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 30/94 (31%), Positives = 51/94 (54%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 142 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 201
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQD 98
K KR + + A +QD + ++ GS D
Sbjct: 202 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDD 235
>MGI|MGI:88360 [details] [associations]
symbol:Cdx1 "caudal type homeobox 1" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0060349 "bone morphogenesis" evidence=IGI;IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:88360 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000976
GO:GO:0060349 eggNOG:NOG291290 KO:K09312 CTD:1044
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
OMA:YSHVEPG EMBL:M37163 EMBL:M80463 EMBL:BC019986 IPI:IPI00109616
PIR:A49303 RefSeq:NP_034010.3 UniGene:Mm.144448
ProteinModelPortal:P18111 SMR:P18111 STRING:P18111
PhosphoSite:P18111 PRIDE:P18111 Ensembl:ENSMUST00000025521
GeneID:12590 KEGG:mmu:12590 UCSC:uc008fbj.2 InParanoid:P18111
NextBio:281734 Bgee:P18111 CleanEx:MM_CDX1 Genevestigator:P18111
GermOnline:ENSMUSG00000024619 Uniprot:P18111
Length = 268
Score = 109 (43.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 15 KRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K +Y+ T Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE++++
Sbjct: 154 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN 213
Score = 52 (23.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 227 GPPLGVDFDPLPPGAFESPSGDPVNEPF 254
GPPLG P G +PS PV E F
Sbjct: 240 GPPLG-SLCPTNAGLLGTPSPVPVKEEF 266
Score = 44 (20.5 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 214 AVKRQLGRHYREDGPPLGVDFDPLPPGAFESPSGDPV 250
A +R++ + ++ PL PLP +PSG P+
Sbjct: 207 AKERKVNKKKQQQQQPLPPTQLPLPLDGTPTPSGPPL 243
>ZFIN|ZDB-GENE-010108-1 [details] [associations]
symbol:vox "ventral homeobox" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI] [GO:0042661
"regulation of mesodermal cell fate specification" evidence=IGI]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-010108-1 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009953
GO:GO:0000976 GO:GO:0042661 EMBL:BC092695 IPI:IPI00629975
UniGene:Dr.82511 STRING:Q568V6 HOGENOM:HOG000170671
HOVERGEN:HBG098403 InParanoid:Q568V6 ArrayExpress:Q568V6
Uniprot:Q568V6
Length = 265
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFC 61
H E K + I+ ++ TP Q+ LEK +N+HKY + + A ++GL+E Q+ WF
Sbjct: 132 HDAE-KDGATRRIRTKF-TPEQIDKLEKIFNKHKYLDAGERVKTALKLGLSETQIRTWFQ 189
Query: 62 HRRLKEKR 69
+RR+K KR
Sbjct: 190 NRRMKLKR 197
>UNIPROTKB|P24340 [details] [associations]
symbol:HOXD9 "Homeobox protein Hox-D9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231180 eggNOG:NOG288226
OrthoDB:EOG4SXNCJ IPI:IPI00814164 PIR:S14797 UniGene:Gga.12699
ProteinModelPortal:P24340 SMR:P24340 STRING:P24340
InParanoid:P24340 Uniprot:P24340
Length = 60
Score = 101 (40.6 bits), Expect = 0.00015, P = 0.00015
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K++S
Sbjct: 4 KRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMS 60
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 101 (40.6 bits), Expect = 0.00015, P = 0.00015
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
KR T Q + LEK + + Y T E + ++++ + LT++QV WF +RR+K K++S
Sbjct: 24 KRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMS 80
>UNIPROTKB|I3LF97 [details] [associations]
symbol:I3LF97 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060847
"endothelial cell fate specification" evidence=IEA] [GO:0060442
"branching involved in prostate gland morphogenesis" evidence=IEA]
[GO:0048844 "artery morphogenesis" evidence=IEA] [GO:0048839 "inner
ear development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045840 "positive regulation of mitosis" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0030510 "regulation of BMP signaling
pathway" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003281
"ventricular septum development" evidence=IEA] [GO:0001894 "tissue
homeostasis" evidence=IEA] [GO:0001886 "endothelial cell
morphogenesis" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00670000097683 Ensembl:ENSSSCT00000022309
Uniprot:I3LF97
Length = 100
Score = 101 (40.6 bits), Expect = 0.00015, P = 0.00015
Identities = 21/63 (33%), Positives = 40/63 (63%)
Query: 9 SLEKNIKRRYK-TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
S + K+R T Q+ LE+ Y +K+ T++ + +++ L+E+QV+ WF +RR+KE
Sbjct: 30 SYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKE 89
Query: 68 KRL 70
K++
Sbjct: 90 KKV 92
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 101 (40.6 bits), Expect = 0.00015, P = 0.00015
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ +GLTE+QV WF +RR+K K+ + + G R +
Sbjct: 26 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDE 85
Query: 83 RSSGVIQDRGS 93
+++ G+
Sbjct: 86 EK---VEEEGN 93
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 101 (40.6 bits), Expect = 0.00015, P = 0.00015
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ +GLTE+QV WF +RR+K K+ + + G R +
Sbjct: 26 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDE 85
Query: 83 RSSGVIQDRGS 93
+++ G+
Sbjct: 86 EK---VEEEGN 93
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 101 (40.6 bits), Expect = 0.00015, P = 0.00015
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 7 KVSLEKNIK-RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
K+ LE+ + R T Q+ LE+ +N Y + ++++AE +GL++ QV WF +RR
Sbjct: 29 KLDLERPKRPRTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRT 88
Query: 66 KEKRL 70
K+K++
Sbjct: 89 KQKKI 93
>UNIPROTKB|P87381 [details] [associations]
symbol:POU2F3 "POU" species:9031 "Gallus gallus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000327 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR010982 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00157
PROSITE:PS00027 PROSITE:PS00465 PROSITE:PS50071 PROSITE:PS51179
SMART:SM00352 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 HSSP:P14859 InterPro:IPR013847 PRINTS:PR00028
GeneTree:ENSGT00700000104117 eggNOG:NOG267922 HOVERGEN:HBG008230
EMBL:AADN02041864 EMBL:U77715 IPI:IPI00822114 STRING:P87381
Ensembl:ENSGALT00000040842 HOGENOM:HOG000201019 Uniprot:P87381
Length = 154
Score = 108 (43.1 bits), Expect = 0.00019, P = 0.00019
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 15 KRRYKTPAQV---MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
KR+ +T + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR KEKR+S
Sbjct: 73 KRKKRTSIETNIRSTLEKRFQDNPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQKEKRIS 132
>UNIPROTKB|F1NHF8 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
IPI:IPI00819450 Ensembl:ENSGALT00000039481 Uniprot:F1NHF8
Length = 60
Score = 100 (40.3 bits), Expect = 0.00020, P = 0.00020
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
T Q + LEK ++ ++Y T KS++A + L+E+QV WF +RR KE++L
Sbjct: 9 TDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAKERKL 59
>UNIPROTKB|I3LRX4 [details] [associations]
symbol:I3LRX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 Ensembl:ENSSSCT00000029259 OMA:PVHVNRI
Uniprot:I3LRX4
Length = 116
Score = 100 (40.3 bits), Expect = 0.00020, P = 0.00020
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
E+ + ++ T Q++ LEK ++ KY + +SQ+A + L+E QV WF +RR K KR+
Sbjct: 1 ERRRRGQHXTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRV 60
Query: 71 SVDEA 75
A
Sbjct: 61 KAGNA 65
>UNIPROTKB|P97273 [details] [associations]
symbol:TITF1 "Thyroid transcription factor 1" species:10141
"Cavia porcellus" [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007411 GO:GO:0021766 GO:GO:0001764
GO:GO:0045893 GO:GO:0005654 GO:GO:0033327 GO:GO:0043565
GO:GO:0006644 GO:GO:0045944 GO:GO:0007626 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0003705 GO:GO:0000122 GO:GO:0030336 GO:GO:0044212
GO:GO:0009725 GO:GO:0060510 GO:GO:0021983 GO:GO:0007492
GO:GO:0021877 GO:GO:0048709 GO:GO:0021759 GO:GO:0021892
GO:GO:0030512 GO:GO:0060441 GO:GO:0010719 GO:GO:0021795
GO:GO:0030878 GO:GO:0060430 GO:GO:0021798 GO:GO:0060486
eggNOG:NOG328614 HOGENOM:HOG000231923 HOVERGEN:HBG006689
GO:GO:0031128 GO:GO:0042696 EMBL:U82718 ProteinModelPortal:P97273
SMR:P97273 STRING:P97273 InParanoid:P97273 Uniprot:P97273
Length = 112
Score = 100 (40.3 bits), Expect = 0.00020, P = 0.00020
Identities = 32/95 (33%), Positives = 43/95 (45%)
Query: 22 AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQ 81
AQV LE+ + + KY + + +A I LT QV WF + R K KR + D+A Q
Sbjct: 11 AQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQQLQ 70
Query: 82 DRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREV 116
S G G G C +Q +S PR V
Sbjct: 71 QDSGG-----GGGGGGAGCPQQQQAQQQS--PRRV 98
>UNIPROTKB|G3V567 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002052 "positive regulation
of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
ProteinModelPortal:G3V567 SMR:G3V567 Ensembl:ENST00000530373
ArrayExpress:G3V567 Bgee:G3V567 Uniprot:G3V567
Length = 128
Score = 89 (36.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
K L++N R T Q+ ALEK + YP + ++A +I L E ++ WF +RR K
Sbjct: 6 KRKLQRN--RTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 63
Query: 67 EKR 69
+R
Sbjct: 64 WRR 66
Score = 47 (21.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 454 LNNEMNVVKRLKGELPQRDYIAKASYAEIPRWTNPIKGSAAEMPSSFSEDETAETNS 510
L N+ +P + + Y IP+ T P+ S+ S +TA TN+
Sbjct: 70 LRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPV--SSFTSGSMLGRTDTALTNT 124
>UNIPROTKB|F1NNC8 [details] [associations]
symbol:TLX1 "T-cell leukemia homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048645 "organ formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008284 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0045165
GeneTree:ENSGT00700000104454 IPI:IPI00573767 EMBL:AADN02030793
Ensembl:ENSGALT00000012707 OMA:XLISELE ArrayExpress:F1NNC8
Uniprot:F1NNC8
Length = 141
Score = 102 (41.0 bits), Expect = 0.00024, P = 0.00024
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFC 61
H +N+ +K R T Q+ LEK ++ KY ++ +A+ + +T+ QV WF
Sbjct: 2 HPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQ 61
Query: 62 HRRLKEKRLSVDE 74
+RR K +R + +E
Sbjct: 62 NRRTKWRRQTAEE 74
>UNIPROTKB|F1NE15 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00821899
Ensembl:ENSGALT00000018034 Uniprot:F1NE15
Length = 60
Score = 99 (39.9 bits), Expect = 0.00025, P = 0.00025
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++
Sbjct: 4 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKIN 60
>UNIPROTKB|F1NVB2 [details] [associations]
symbol:TLX3 "T-cell leukemia homeobox protein 3"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104454 EMBL:AADN02035942 IPI:IPI00814284
Ensembl:ENSGALT00000003427 OMA:LAFPIAR ArrayExpress:F1NVB2
Uniprot:F1NVB2
Length = 136
Score = 99 (39.9 bits), Expect = 0.00025, P = 0.00025
Identities = 24/88 (27%), Positives = 45/88 (51%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFC 61
H +N+ ++ R + Q+ LEK ++ KY ++ +A+ + +T+ QV WF
Sbjct: 1 HPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQ 60
Query: 62 HRRLKEKRLSVDEAFVGGRQDRSSGVIQ 89
+RR K +R + +E RQ S ++Q
Sbjct: 61 NRRTKWRRQTAEER-EAERQQASRLMLQ 87
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 99 (39.9 bits), Expect = 0.00025, P = 0.00025
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
KR T Q + LEK + + Y T E + ++++ I LT++QV WF +RR+K K+++
Sbjct: 24 KRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMN 80
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 99 (39.9 bits), Expect = 0.00025, P = 0.00025
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
KR T Q + LEK + + Y T E + ++++ I LT++QV WF +RR+K K+++
Sbjct: 28 KRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMN 84
>FB|FBgn0051481 [details] [associations]
symbol:pb "proboscipedia" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;NAS] [GO:0007381
"specification of segmental identity, labial segment"
evidence=IMP;NAS] [GO:0007382 "specification of segmental identity,
maxillary segment" evidence=IMP;NAS] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0048728 "proboscis development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AE001572
eggNOG:NOG321520 GO:GO:0048728 GO:GO:0007381 EMBL:S94723
EMBL:S94709 EMBL:S94714 EMBL:S94717 EMBL:S94719 EMBL:X63729
EMBL:X63728 PIR:S20881 RefSeq:NP_476669.3 RefSeq:NP_996161.1
RefSeq:NP_996162.1 RefSeq:NP_996163.1 UniGene:Dm.5646
ProteinModelPortal:P31264 SMR:P31264 STRING:P31264
EnsemblMetazoa:FBtr0089276 GeneID:40826 KEGG:dme:Dmel_CG31481
UCSC:CG31481-RA CTD:40826 FlyBase:FBgn0051481
GeneTree:ENSGT00700000104446 InParanoid:P31264 KO:K09302
OMA:FEAPPIN OrthoDB:EOG4H189X PhylomeDB:P31264 GenomeRNAi:40826
NextBio:820784 Bgee:P31264 GermOnline:CG31481 GO:GO:0007382
Uniprot:P31264
Length = 782
Score = 109 (43.4 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 194 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 253
Query: 68 KRLSVDEAFVGGRQDRSSG 86
KR ++ + +D G
Sbjct: 254 KRQTLSKTDDEDNKDSLKG 272
Score = 64 (27.6 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 28/110 (25%), Positives = 46/110 (41%)
Query: 304 DYAGTKSHNQLKQKSPLLHYSNFSPHQNSSLNAYEDSTPVYDGNHCY-SLSSKHDAEWMG 362
++A + HN K LH SP + SS N +++S +H Y + + + +
Sbjct: 503 EFAASPHHNP-HNKQQALHGEYLSP-KPSSANFHQNSQQQQQNDHFYYNYNDTNGTPY-- 558
Query: 363 LNSVMNHHEPHGGKTNSEEAKPLLNDNHVVSSKMVRNSNYFTRPSNFTLG 412
LN HH H + + ++ + NHV + N PSNF G
Sbjct: 559 LNHQQQHH--HHAQHHQQQQH---HQNHVADFEGPVNG-----PSNFNNG 598
Score = 39 (18.8 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 283 DSSKMDLQDSYIDENLNSKRS 303
DS K D D D N NSK+S
Sbjct: 268 DSLKGD--DDQSDSNSNSKKS 286
>UNIPROTKB|F1NZJ4 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AADN02020025 EMBL:AADN02020026
EMBL:AADN02020027 EMBL:AADN02020028 EMBL:AADN02020029
EMBL:AADN02020030 IPI:IPI00818317 Ensembl:ENSGALT00000038689
ArrayExpress:F1NZJ4 Uniprot:F1NZJ4
Length = 168
Score = 110 (43.8 bits), Expect = 0.00029, P = 0.00029
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ +GLTE+QV WF +RR+K K+ + + F +Q+
Sbjct: 86 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPASKQE 145
Query: 83 RSSGVIQDRGSGLRQDSCGS 102
G + L D S
Sbjct: 146 GKEGEAKKETHDLEDDRAES 165
>ZFIN|ZDB-GENE-980526-330 [details] [associations]
symbol:cdx4 "caudal type homeo box transcription
factor 4" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0001756
"somitogenesis" evidence=IGI] [GO:0009952 "anterior/posterior
pattern specification" evidence=IGI;IMP] [GO:0048793 "pronephros
development" evidence=IGI;IMP] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IGI] [GO:0031016 "pancreas development"
evidence=IGI;IMP] [GO:0048617 "embryonic foregut morphogenesis"
evidence=IMP] [GO:0021906 "hindbrain-spinal cord boundary
formation" evidence=IMP] [GO:0021903 "rostrocaudal neural tube
patterning" evidence=IGI] [GO:0009948 "anterior/posterior axis
specification" evidence=IGI] [GO:0030097 "hemopoiesis"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-330
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GO:GO:0001756 GO:GO:0030097 GO:GO:0031016 GO:GO:0048384
GO:GO:0000976 GO:GO:0009948 GO:GO:0048617 GO:GO:0048793
HOGENOM:HOG000115975 HOVERGEN:HBG005302 GO:GO:0021906 EMBL:X66958
IPI:IPI00489697 PIR:S25706 UniGene:Dr.11836
ProteinModelPortal:Q90262 SMR:Q90262 InParanoid:Q90262
NextBio:20933345 ArrayExpress:Q90262 Uniprot:Q90262
Length = 300
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 31/83 (37%), Positives = 49/83 (59%)
Query: 15 KRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K +Y+ T Q + LEK ++ ++Y T KS++A +GL+E+QV WF +RR KE++L
Sbjct: 151 KEKYRVVYTDHQRLELEKEFHFNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKLI 210
Query: 72 VDEAFVGGRQDRSSGVIQ-DRGS 93
+ G+ D S G + D GS
Sbjct: 211 KKKL---GQSDGSGGSVHSDPGS 230
>RGD|1587253 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001525 "angiogenesis"
evidence=ISO] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=ISO] [GO:0002686 "negative regulation of
leukocyte migration" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=ISO] [GO:0045656 "negative
regulation of monocyte differentiation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO] [GO:0048863 "stem cell
differentiation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 98 (39.6 bits), Expect = 0.00032, P = 0.00032
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R+ T Q + LEK ++ ++Y T ++A + LTE+Q+ WF +RR+K K+ DE+
Sbjct: 9 RQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKKEHKDES 68
>UNIPROTKB|P09634 [details] [associations]
symbol:Hoxa7 "Homeobox protein Hox-A7" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 98 (39.6 bits), Expect = 0.00032, P = 0.00032
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R+ T Q + LEK ++ ++Y T ++A + LTE+Q+ WF +RR+K K+ DE+
Sbjct: 9 RQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKKEHKDES 68
>FB|FBgn0015524 [details] [associations]
symbol:otp "orthopedia" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0007417 "central nervous system development"
evidence=NAS] [GO:0007379 "segment specification" evidence=NAS]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0046331 "lateral inhibition"
evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:AE013599
GO:GO:0007275 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046331 InterPro:IPR003654
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0000976
eggNOG:NOG256838 EMBL:BT023887 EMBL:BT030422 RefSeq:NP_001036563.1
RefSeq:NP_001097388.2 UniGene:Dm.14052 ProteinModelPortal:P56672
SMR:P56672 DIP:DIP-17198N MINT:MINT-743840 STRING:P56672
EnsemblMetazoa:FBtr0290289 GeneID:37364 KEGG:dme:Dmel_CG10036
UCSC:CG10036-RC CTD:23440 FlyBase:FBgn0015524 InParanoid:P56672
OMA:HAGVNSF OrthoDB:EOG4J6Q7G PhylomeDB:P56672 GenomeRNAi:37364
NextBio:803284 Bgee:P56672 GermOnline:CG10036 Uniprot:P56672
Length = 409
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 6 NKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCH 62
N S+++ ++R++T PAQ+ LE+ +++ YP M+ ++A +IGLTE +V WF +
Sbjct: 100 NNNSMQQQDQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQN 159
Query: 63 RRLK-EKRLSVDEAF 76
RR K +KR F
Sbjct: 160 RRAKWKKRKKTTNVF 174
>UNIPROTKB|E1BGM6 [details] [associations]
symbol:HOXB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048857 "neural
nucleus development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0021612 "facial nerve
structural organization" evidence=IEA] [GO:0021570 "rhombomere 4
development" evidence=IEA] [GO:0021569 "rhombomere 3 development"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0002011 "morphogenesis of an
epithelial sheet" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0048704 GO:GO:0002011
GO:GO:0021612 GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569
GO:GO:0021570 CTD:3212 OMA:RAAWEAC GO:GO:0048857 EMBL:DAAA02049068
IPI:IPI00706154 RefSeq:NP_001178264.1 UniGene:Bt.17183
Ensembl:ENSBTAT00000013159 GeneID:616129 KEGG:bta:616129
NextBio:20899975 Uniprot:E1BGM6
Length = 354
Score = 102 (41.0 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+ ++ Y T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K KR
Sbjct: 141 RRLRTAY-TNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKR 197
Score = 55 (24.4 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 27/79 (34%), Positives = 35/79 (44%)
Query: 216 KRQLGRHYREDGPPLGVDFDPLPPGAFESPSGDPVNEP---------FYVGNSRWSNSPE 266
KRQ +H RE PP D +P PGA + +G+P EP + +PE
Sbjct: 196 KRQT-QH-RE--PP---DGEPACPGALRN-TGEPAEEPVASPGRPSVLQASRAACCLTPE 247
Query: 267 V----PEIDKPRALGTRYE 281
V P + PRAL R E
Sbjct: 248 VAQGPPGVSGPRALAARVE 266
Score = 41 (19.5 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 468 LPQRDYIAKASYAEIPRWTNPIKGSAAEMPSSFSEDE 504
LP + A S ++ +P + + P FSE+E
Sbjct: 302 LPDLSFFAADSCLQLSGGLSPSLQGSLDSPVPFSEEE 338
>DICTYBASE|DDB_G0284293 [details] [associations]
symbol:hbx10 "putative homeobox transcription factor"
species:44689 "Dictyostelium discoideum" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 dictyBase:DDB_G0284293 GO:GO:0007275 GO:GO:0005634
GenomeReviews:CM000153_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AAFI02000064 eggNOG:COG5576
RefSeq:XP_638704.1 HSSP:P20263 ProteinModelPortal:Q54PU1
EnsemblProtists:DDB0220476 GeneID:8624535 KEGG:ddi:DDB_G0284293
InParanoid:Q54PU1 OMA:DNIVPSI Uniprot:Q54PU1
Length = 638
Score = 109 (43.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 20/58 (34%), Positives = 39/58 (67%)
Query: 13 NIKRRYKT-PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
N K+R +T P Q+ LE+ + K P+++++ ++A Q+G++ ++V WF ++R K KR
Sbjct: 301 NKKKRQRTSPEQLAILEQIFETDKMPSQQIRVRLANQLGMSSRRVQIWFQNKRAKVKR 358
Score = 59 (25.8 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 23/109 (21%), Positives = 44/109 (40%)
Query: 236 PLPPGAFESPSGDPVNEPFYVGNSRWSNSPEVPEIDKPRALGTRYEVDSSKMDLQD-SYI 294
P PP SP+ + NS S+ P P+I + + + + K + D S
Sbjct: 525 PSPPSIVPSPNKKTKQMGGFSLNSTASSLPSFPQI---KLNSSSKHIPTDKQNNSDFSNF 581
Query: 295 DENLNSKRSDYAGTKSHNQLKQKSPLLHYSNFSPHQNSSLNAYEDSTPV 343
+ N N+ ++ ++N + +N S + N+ N + D P+
Sbjct: 582 NNNNNNNNNNNNNNNNNNNINNNGNNNSNNNDSNNNNNKSN-FSDYQPL 629
>UNIPROTKB|F1MJX0 [details] [associations]
symbol:CDX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060711 "labyrinthine layer development" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0045197 "establishment or maintenance of
epithelial cell apical/basal polarity" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001829 "trophectodermal cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0017053
GO:GO:0003714 GO:GO:0009952 GO:GO:0045597 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0001829
GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
GO:GO:0000976 GO:GO:0060711 GO:GO:0045197 EMBL:DAAA02033157
IPI:IPI00838985 Ensembl:ENSBTAT00000047376 Uniprot:F1MJX0
Length = 142
Score = 102 (41.0 bits), Expect = 0.00036, P = 0.00036
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 15 KRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K +Y+ T Q + LEK ++ +Y T K+++A +GL+E+QV WF +RR KE++++
Sbjct: 22 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKIN 81
>FB|FBgn0040318 [details] [associations]
symbol:HGTX "HGTX" species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IGI;IMP] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0070491
"repressing transcription factor binding" evidence=IPI] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:AE014296
GO:GO:0030182 GO:GO:0045944 GO:GO:0007417 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0003705
GO:GO:0000122 GO:GO:0000976 eggNOG:NOG265304 RefSeq:NP_001137954.1
UniGene:Dm.3490 ProteinModelPortal:B7Z056 SMR:B7Z056 STRING:B7Z056
GeneID:53446 KEGG:dme:Dmel_CG13475 CTD:53446 FlyBase:FBgn0040318
OMA:VHAHAMA OrthoDB:EOG447D8J PhylomeDB:B7Z056 GenomeRNAi:53446
NextBio:841198 Bgee:B7Z056 Uniprot:B7Z056
Length = 605
Score = 122 (48.0 bits), Expect = 0.00037, P = 0.00037
Identities = 37/126 (29%), Positives = 61/126 (48%)
Query: 3 SEENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
S ++ S +K+ K+++ P Q+ ALEK + + KY ++++A +G++E QV
Sbjct: 471 SHQHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKV 530
Query: 59 WFCHRRLK-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQ 117
WF +RR K KR + + A +QD D G G C T D S+D E
Sbjct: 531 WFQNRRTKWRKRHAAEMATAKRKQD-------DMG-GDNDGDCSETMDSDNESLDMGESP 582
Query: 118 SRMLYC 123
++ C
Sbjct: 583 AQNKRC 588
>UNIPROTKB|E2RRG1 [details] [associations]
symbol:NKX6-1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 OMA:TPLYPAY EMBL:AAEX03016734
Ensembl:ENSCAFT00000014553 NextBio:20861334 Uniprot:E2RRG1
Length = 288
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 149 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 208
Query: 61 CHRRLK-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQ 117
+RR K K+ + + A +QD + ++ +D K D S D + Q
Sbjct: 209 QNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD-DYNKPLDPNSDDEKITQ 265
>UNIPROTKB|F1LWY9 [details] [associations]
symbol:F1LWY9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0048705 GeneTree:ENSGT00700000104332 IPI:IPI00957183
Ensembl:ENSRNOT00000067861 Uniprot:F1LWY9
Length = 181
Score = 111 (44.1 bits), Expect = 0.00038, P = 0.00038
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ + LTE+QV WF +RR+K K+ + + F R +
Sbjct: 99 QTLELEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQNRRMKWKKENNRDKFPASRPE 158
Query: 83 RSSGVIQDRGSGLRQDSC-GST 103
G + SGL +D G T
Sbjct: 159 AKDGDPKKEVSGLEEDGAEGPT 180
>UNIPROTKB|F6Q274 [details] [associations]
symbol:F6Q274 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
OrthoDB:EOG4TTGJP EMBL:CU498958 Ensembl:ENSSSCT00000011554
OMA:CGSEDED Uniprot:F6Q274
Length = 280
Score = 106 (42.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+K K R T Q+ LEK + KY + + Q+A+Q+GLT QV WF +RR K KR
Sbjct: 123 KKRRKSRTFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKR 181
Score = 51 (23.0 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 19/82 (23%), Positives = 33/82 (40%)
Query: 173 SRFVRQNGDVTPVRCNIGRSKEYKPSGYLKVKG----ESENAAISAVKRQLGRHYREDGP 228
+R + D+ ++ ++ K+ PSG + + E + A GR G
Sbjct: 174 NRRAKLKRDLEEMKADVESPKKLGPSGQMDIVALAELEQNSEAAGGGGGGCGRAKSRPGS 233
Query: 229 PLGVDFDPLPPGAFESPSGDPV 250
P LPPGA ++P P+
Sbjct: 234 PA------LPPGAPQAPGAGPL 249
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 97 (39.2 bits), Expect = 0.00041, P = 0.00041
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
K + Y T QV+ LEK ++ ++Y T + ++A + L+E+Q+ WF +RR+K K+
Sbjct: 11 KRSRTAY-TRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKK 67
>UNIPROTKB|F6USR4 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
IPI:IPI00821029 ProteinModelPortal:F6USR4
Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
Length = 154
Score = 106 (42.4 bits), Expect = 0.00044, P = 0.00044
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 3 SEENKVSLEKNIKRRYK----TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
S+E E N K R + T Q+ LE + H Y T + ++A + LTE+QV
Sbjct: 24 SQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKV 83
Query: 59 WFCHRRLKEKRLSVDEAFVGGRQ 81
WF +RR+K KR+ + R+
Sbjct: 84 WFQNRRMKWKRVKGGQQGAAARE 106
>UNIPROTKB|F1NNJ9 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454 CTD:84504
KO:K09350 OMA:GPAGFKA EMBL:AADN02047157 EMBL:AADN02047158
IPI:IPI00604205 RefSeq:NP_001186477.1 UniGene:Gga.2725
Ensembl:ENSGALT00000017097 GeneID:395591 KEGG:gga:395591
NextBio:20815664 Uniprot:F1NNJ9
Length = 278
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 39/128 (30%), Positives = 66/128 (51%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 145 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 204
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCH 124
K KR + + A + D + +++ S +D K D S D E +R+L H
Sbjct: 205 KWRKRHAAEMASAKKKHDSETEKLKE--SSDNEDDDEYNKPLDPNSDD--EKITRLLKKH 260
Query: 125 DFPATDLA 132
+T+LA
Sbjct: 261 K--STNLA 266
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 96 (38.9 bits), Expect = 0.00053, P = 0.00053
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
R+ T Q + LEK ++ ++Y T + ++A + LTE+Q+ WF +RR+K K+
Sbjct: 11 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKK 64
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 96 (38.9 bits), Expect = 0.00053, P = 0.00053
Identities = 24/88 (27%), Positives = 45/88 (51%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ +GLTE+QV WF +RR+K K+ + + F + +
Sbjct: 6 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCE 65
Query: 83 RSSGVIQDRGSGLRQDSCGSTKQGDYRS 110
+ Q G ++GD ++
Sbjct: 66 QEELEKQKLERAPEAADEGDAQKGDKKN 93
>UNIPROTKB|H0YJ33 [details] [associations]
symbol:CDX2 "Homeobox protein CDX-2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AL591024 HGNC:HGNC:1806 Ensembl:ENST00000548877
Uniprot:H0YJ33
Length = 156
Score = 106 (42.4 bits), Expect = 0.00053, P = 0.00053
Identities = 23/66 (34%), Positives = 42/66 (63%)
Query: 9 SLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
S++ K +Y+ T Q + LEK ++ +Y T K+++A +GL+E+QV WF +RR
Sbjct: 23 SVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRA 82
Query: 66 KEKRLS 71
KE++++
Sbjct: 83 KERKIN 88
>UNIPROTKB|P51783 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:10141 "Cavia
porcellus" [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
GO:GO:0045638 HOGENOM:HOG000294138 HOVERGEN:HBG016849
OrthoDB:EOG4D26QZ EMBL:X13536 PIR:A48428 ProteinModelPortal:P51783
SMR:P51783 Uniprot:P51783
Length = 162
Score = 107 (42.7 bits), Expect = 0.00055, P = 0.00055
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 99 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 158
Query: 75 A 75
A
Sbjct: 159 A 159
>UNIPROTKB|Q60554 [details] [associations]
symbol:NKX6-1 "Homeobox protein Nkx-6.1" species:10036
"Mesocricetus auratus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0031016 "pancreas development" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0051594 "detection of glucose" evidence=IDA]
[GO:0072560 "type B pancreatic cell maturation" evidence=IMP]
[GO:2000078 "positive regulation of type B pancreatic cell
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0051091 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0000976 GO:GO:2000078 GO:GO:0051594
HOVERGEN:HBG070987 GO:GO:0072560 EMBL:X81409 PIR:I48188
ProteinModelPortal:Q60554 SMR:Q60554 Uniprot:Q60554
Length = 364
Score = 117 (46.2 bits), Expect = 0.00059, P = 0.00059
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
Query: 61 CHRRLK-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQ 117
+RR K K+ + + A +QD + ++ +D K D S D + Q
Sbjct: 285 QNRRTKWRKKHAAEMATAKKKQDSETERLKGTSENEEEDD-DYNKPLDPNSDDEKITQ 341
>MGI|MGI:1206039 [details] [associations]
symbol:Nkx6-1 "NK6 homeobox 1" species:10090 "Mus musculus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;TAS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007224 "smoothened signaling pathway" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0021912
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord motor neuron fate specification"
evidence=IGI] [GO:0021913 "regulation of transcription from RNA
polymerase II promoter involved in ventral spinal cord interneuron
specification" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IGI;IMP]
[GO:0031018 "endocrine pancreas development" evidence=IGI;IMP]
[GO:0032024 "positive regulation of insulin secretion"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0044424 "intracellular part" evidence=IDA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IDA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IGI] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IGI] [GO:0048709
"oligodendrocyte differentiation" evidence=IGI]
Reactome:REACT_13641 InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:1206039
GO:GO:0005829 GO:GO:0005634 GO:GO:0042493 GO:GO:0008283
GO:GO:0032024 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
Reactome:REACT_127416 GO:GO:0035094 GO:GO:0045666 GO:GO:0031018
GO:GO:0000976 GO:GO:0071375 GO:GO:0007224 GO:GO:0048709
GO:GO:0003323 GO:GO:0071345 GeneTree:ENSGT00680000099625
GO:GO:0021913 GO:GO:0045687 GO:GO:0045686 CTD:4825 eggNOG:NOG265304
HOGENOM:HOG000060127 HOVERGEN:HBG070987 KO:K08030 OMA:TPLYPAY
OrthoDB:EOG4JT064 GO:GO:0021912 EMBL:AF357883 EMBL:BC138019
EMBL:BC138020 EMBL:AF291666 IPI:IPI00117513 RefSeq:NP_659204.1
UniGene:Mm.193072 ProteinModelPortal:Q99MA9 SMR:Q99MA9
STRING:Q99MA9 PhosphoSite:Q99MA9 PRIDE:Q99MA9
Ensembl:ENSMUST00000044125 GeneID:18096 KEGG:mmu:18096
UCSC:uc008yim.1 InParanoid:B2RQP4 NextBio:293251 Bgee:Q99MA9
Genevestigator:Q99MA9 GermOnline:ENSMUSG00000035187 Uniprot:Q99MA9
Length = 365
Score = 117 (46.2 bits), Expect = 0.00059, P = 0.00059
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 226 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 285
Query: 61 CHRRLK-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQ 117
+RR K K+ + + A +QD + ++ +D K D S D + Q
Sbjct: 286 QNRRTKWRKKHAAEMATAKKKQDSETERLKGTSEN-EEDDDDYNKPLDPNSDDEKITQ 342
>RGD|69318 [details] [associations]
symbol:Nkx6-1 "NK6 homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003323 "type B pancreatic cell
development" evidence=IEP] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0007224
"smoothened signaling pathway" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA;ISO] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA;ISO] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=ISO] [GO:0031018
"endocrine pancreas development" evidence=ISO] [GO:0032024 "positive
regulation of insulin secretion" evidence=IMP] [GO:0035094 "response
to nicotine" evidence=IEP] [GO:0042493 "response to drug"
evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0044424 "intracellular part" evidence=ISO]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA;ISO] [GO:0045687 "positive regulation
of glial cell differentiation" evidence=IEA;ISO] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA;ISO] [GO:0071345
"cellular response to cytokine stimulus" evidence=IEP] [GO:0071375
"cellular response to peptide hormone stimulus" evidence=IEP]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:69318 GO:GO:0005634 GO:GO:0022008 GO:GO:0042493
GO:GO:0008283 GO:GO:0043565 GO:GO:0032024 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0035094 GO:GO:0045666
GO:GO:0000976 GO:GO:0071375 GO:GO:0007224 GO:GO:0048709
GO:GO:0003323 GO:GO:0071345 GeneTree:ENSGT00680000099625
GO:GO:0021913 GO:GO:0045687 GO:GO:0045686 CTD:4825 eggNOG:NOG265304
HOGENOM:HOG000060127 HOVERGEN:HBG070987 KO:K08030 OMA:TPLYPAY
OrthoDB:EOG4JT064 GO:GO:0021912 EMBL:AF004431 IPI:IPI00212312
RefSeq:NP_113925.1 UniGene:Rn.11387 ProteinModelPortal:O35762
SMR:O35762 STRING:O35762 Ensembl:ENSRNOT00000002928 GeneID:65193
KEGG:rno:65193 InParanoid:O35762 NextBio:614120
Genevestigator:O35762 GermOnline:ENSRNOG00000002149 Uniprot:O35762
Length = 365
Score = 117 (46.2 bits), Expect = 0.00059, P = 0.00059
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 226 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 285
Query: 61 CHRRLK-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQ 117
+RR K K+ + + A +QD + ++ +D K D S D + Q
Sbjct: 286 QNRRTKWRKKHAAEMATAKKKQDSETERLKGTSEN-EEDDDDYNKPLDPNSDDEKITQ 342
>UNIPROTKB|E1BNQ7 [details] [associations]
symbol:NKX6-1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0045687
"positive regulation of glial cell differentiation" evidence=IEA]
[GO:0045686 "negative regulation of glial cell differentiation"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0021913 "regulation of transcription
from RNA polymerase II promoter involved in ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0045666
GO:GO:0031018 GO:GO:0000976 GO:GO:0007224 GO:GO:0048709
GeneTree:ENSGT00680000099625 GO:GO:0021913 GO:GO:0045687
GO:GO:0045686 CTD:4825 KO:K08030 OMA:TPLYPAY GO:GO:0021912
EMBL:DAAA02018306 IPI:IPI00696939 RefSeq:NP_001193167.1
UniGene:Bt.112406 Ensembl:ENSBTAT00000003266 GeneID:616211
KEGG:bta:616211 NextBio:20900018 Uniprot:E1BNQ7
Length = 366
Score = 117 (46.2 bits), Expect = 0.00060, P = 0.00060
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 223 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 282
Query: 61 CHRRLK-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQ 117
+RR K K+ + + A +QD + ++ +D K D S D + Q
Sbjct: 283 QNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD-DYNKPLDPNSDDEKITQ 339
>UNIPROTKB|P78426 [details] [associations]
symbol:NKX6-1 "Homeobox protein Nkx-6.1" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0021912
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord motor neuron fate specification"
evidence=IEA] [GO:0021913 "regulation of transcription from RNA
polymerase II promoter involved in ventral spinal cord interneuron
specification" evidence=IEA] [GO:0032024 "positive regulation of
insulin secretion" evidence=IEA] [GO:0035094 "response to nicotine"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0071345
"cellular response to cytokine stimulus" evidence=IEA] [GO:0071375
"cellular response to peptide hormone stimulus" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=TAS] [GO:0031018
"endocrine pancreas development" evidence=TAS] [GO:2000078
"positive regulation of type B pancreatic cell development"
evidence=ISS] [GO:0072560 "type B pancreatic cell maturation"
evidence=ISS] [GO:0051594 "detection of glucose" evidence=ISS]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0031016 "pancreas
development" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 Reactome:REACT_111045
GO:GO:0051091 GO:GO:0042493 GO:GO:0008283 GO:GO:0045944
GO:GO:0032024 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0009887 GO:GO:0035094 GO:GO:0045666
GO:GO:0000976 GO:GO:0071375 GO:GO:0007224 GO:GO:0048709
GO:GO:2000078 GO:GO:0071345 GO:GO:0021913 GO:GO:0051594
GO:GO:0045687 GO:GO:0045686 EMBL:U66799 EMBL:U66797 EMBL:U66798
EMBL:AC096766 IPI:IPI00019774 RefSeq:NP_006159.2 UniGene:Hs.546270
ProteinModelPortal:P78426 SMR:P78426 STRING:P78426
PhosphoSite:P78426 DMDM:288558819 PRIDE:P78426 DNASU:4825
Ensembl:ENST00000295886 GeneID:4825 KEGG:hsa:4825 UCSC:uc003hpa.1
CTD:4825 GeneCards:GC04M085339 HGNC:HGNC:7839 HPA:HPA036774
MIM:602563 neXtProt:NX_P78426 PharmGKB:PA31646 eggNOG:NOG265304
HOGENOM:HOG000060127 HOVERGEN:HBG070987 InParanoid:P78426 KO:K08030
OMA:TPLYPAY OrthoDB:EOG4JT064 PhylomeDB:P78426 GenomeRNAi:4825
NextBio:18584 ArrayExpress:P78426 Bgee:P78426 CleanEx:HS_NKX6-1
Genevestigator:P78426 GermOnline:ENSG00000163623 GO:GO:0021912
GO:GO:0072560 Uniprot:P78426
Length = 367
Score = 117 (46.2 bits), Expect = 0.00060, P = 0.00060
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
Query: 61 CHRRLK-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQ 117
+RR K K+ + + A +QD + ++ +D K D S D + Q
Sbjct: 285 QNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDD-DYNKPLDPNSDDEKITQ 341
>UNIPROTKB|P23459 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X57158
IPI:IPI00576774 PIR:I50145 RefSeq:NP_997060.1 UniGene:Gga.3187
ProteinModelPortal:P23459 SMR:P23459 GeneID:396301 KEGG:gga:396301
CTD:3234 NextBio:20816351 Uniprot:P23459
Length = 188
Score = 110 (43.8 bits), Expect = 0.00062, P = 0.00062
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ +GLTE+QV WF +RR+K K+ + + F +Q+
Sbjct: 106 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPASKQE 165
Query: 83 RSSGVIQDRGSGLRQDSCGS 102
G + L D S
Sbjct: 166 GKEGEAKKETHDLEDDRAES 185
>WB|WBGene00000437 [details] [associations]
symbol:ceh-13 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0040007
GO:GO:0007411 GO:GO:0002119 GO:GO:0043565 GO:GO:0016358
GO:GO:0010171 GO:GO:0040018 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009790
GO:GO:0016337 GO:GO:0007413 GeneTree:ENSGT00700000104189
EMBL:X17077 EMBL:FO080424 PIR:S09505 RefSeq:NP_498655.1
ProteinModelPortal:P17488 SMR:P17488 STRING:P17488
EnsemblMetazoa:R13A5.5 GeneID:176069 KEGG:cel:CELE_R13A5.5
UCSC:R13A5.5 CTD:176069 WormBase:R13A5.5 eggNOG:NOG236971
HOGENOM:HOG000018801 InParanoid:P17488 KO:K09301 OMA:QHNTYKW
NextBio:890976 Uniprot:P17488
Length = 202
Score = 111 (44.1 bits), Expect = 0.00065, P = 0.00065
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 5 ENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
+ KV E R T Q+ LEK ++ KY ++++A + L E QV WF +RR
Sbjct: 107 KKKVIDENGTNRTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKIWFQNRR 166
Query: 65 LKEKRLSVDEAFV 77
+KEK+ ++AF+
Sbjct: 167 MKEKKREKEKAFL 179
>UNIPROTKB|P15142 [details] [associations]
symbol:CHOX-7 "Homeobox protein CHOX-7" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:X16159 IPI:IPI00683482 PIR:S05005
UniGene:Gga.190 ProteinModelPortal:P15142 SMR:P15142
HOVERGEN:HBG100178 Uniprot:P15142
Length = 124
Score = 95 (38.5 bits), Expect = 0.00068, P = 0.00067
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 12 KNIKRRYK-TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
K+ +RR T Q++ LEK ++ KY + +SQ+A + L+E QV WF +RR K KR+
Sbjct: 23 KSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRI 82
>UNIPROTKB|F1SHT6 [details] [associations]
symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:CU480612
ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
OMA:RRYEISQ Uniprot:F1SHT6
Length = 93
Score = 95 (38.5 bits), Expect = 0.00068, P = 0.00067
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
KR T Q + LEK + + Y T E + +++ + LT++QV WF +RR+K K+++
Sbjct: 22 KRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMN 78
>UNIPROTKB|G3ECA1 [details] [associations]
symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
Length = 94
Score = 95 (38.5 bits), Expect = 0.00068, P = 0.00067
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
KR T Q + LEK + + Y T E + +++ + LT++QV WF +RR+K K+++
Sbjct: 23 KRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMN 79
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 95 (38.5 bits), Expect = 0.00068, P = 0.00067
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAF 76
Q + LEK + + Y T + + +V+ +GLTE+QV WF +RR+K K+ + + F
Sbjct: 22 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKF 75
>RGD|1588601 [details] [associations]
symbol:Hoxd3 "homeo box D3" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0007160 "cell-matrix adhesion" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 95 (38.5 bits), Expect = 0.00068, P = 0.00067
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T AQ++ LEK ++ ++Y + ++A + LTE+Q+ WF +RR+K K+
Sbjct: 19 TSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKK 68
>UNIPROTKB|P18867 [details] [associations]
symbol:Hoxd3 "Homeobox protein Hox-D3" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 95 (38.5 bits), Expect = 0.00068, P = 0.00067
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T AQ++ LEK ++ ++Y + ++A + LTE+Q+ WF +RR+K K+
Sbjct: 19 TSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKK 68
>UNIPROTKB|I3L5U0 [details] [associations]
symbol:POU2F3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043922 "negative
regulation by host of viral transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042060 "wound healing" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000327
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR010982
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00157 PROSITE:PS00027
PROSITE:PS00465 PROSITE:PS50071 PROSITE:PS51179 SMART:SM00352
SMART:SM00389 GO:GO:0005737 GO:GO:0030216 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0042060 Gene3D:1.10.260.40 SUPFAM:SSF47413
InterPro:IPR013847 PRINTS:PR00028 GO:GO:0043922
GeneTree:ENSGT00700000104117 EMBL:CU595407
Ensembl:ENSSSCT00000023401 Uniprot:I3L5U0
Length = 221
Score = 111 (44.1 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 15 KRRYKTPAQV---MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
KR+ +T + + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR KEKR++
Sbjct: 66 KRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRIN 125
Query: 72 VDEAFVGGRQDRSSGVIQDRGS 93
A SS ++ GS
Sbjct: 126 CPVATPIKSPMYSSRLVSPSGS 147
Score = 38 (18.4 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 484 RWTNPIKGSAAEMPSSFSEDETAETNSS 511
R ++P G A PS+ + A NSS
Sbjct: 175 RPSSPGSGLHASSPSASQNNSKAAVNSS 202
>UNIPROTKB|F1P2W4 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099625 EMBL:AADN02047157
EMBL:AADN02047158 IPI:IPI00822098 Ensembl:ENSGALT00000038553
Uniprot:F1P2W4
Length = 250
Score = 113 (44.8 bits), Expect = 0.00075, P = 0.00075
Identities = 36/120 (30%), Positives = 61/120 (50%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 123 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 182
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCH 124
K KR + + A + D + +++ S +D K D S D E +R+L H
Sbjct: 183 KWRKRHAAEMASAKKKHDSETEKLKE--SSDNEDDDEYNKPLDPNSDD--EKITRLLKKH 238
>RGD|1305100 [details] [associations]
symbol:Pbx4 "pre-B-cell leukemia homeobox 4" species:10116
"Rattus norvegicus" [GO:0001741 "XY body" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
InterPro:IPR001356 InterPro:IPR005542 InterPro:IPR009057
Pfam:PF00046 Pfam:PF03792 PROSITE:PS50071 SMART:SM00389 RGD:1305100
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001741 GeneTree:ENSGT00390000016426
EMBL:CH474031 OrthoDB:EOG45HRXQ CTD:80714 KO:K15611 OMA:CHRMKSA
IPI:IPI00364631 RefSeq:NP_001101869.1 UniGene:Rn.89526
Ensembl:ENSRNOT00000014265 GeneID:361131 KEGG:rno:361131
UCSC:RGD:1305100 NextBio:675316 Uniprot:D4AA41
Length = 379
Score = 115 (45.5 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 36/104 (34%), Positives = 57/104 (54%)
Query: 10 LEKNIKRR-YKTPAQVMALEKFYNE--HKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
L+ KRR + A + E FY+ + YP+EE K ++A + G+T QVS WF ++R++
Sbjct: 214 LDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEETKEELARKGGITVSQVSNWFGNKRIR 273
Query: 67 EKRLS---VDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGD 107
K+ + +EA + ++S V + R SG Q SC ST D
Sbjct: 274 YKKNTGKFQEEATM--YTGKTSTVTKTRVSG-GQTSCQSTPSPD 314
Score = 43 (20.2 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 228 PPLGVDFDPLPPGAFE-SPSGDPVNEPFYVGNSRWSNS 264
PP GV PL G+++ + + P + P G+S NS
Sbjct: 340 PPGGVCLQPLAHGSWQRATTSQPSSSP--AGDSGSFNS 375
>UNIPROTKB|F1NE14 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00682592
Ensembl:ENSGALT00000018035 Uniprot:F1NE14
Length = 169
Score = 107 (42.7 bits), Expect = 0.00079, P = 0.00079
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 106 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 165
Query: 75 A 75
A
Sbjct: 166 A 166
>UNIPROTKB|Q98924 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
HOVERGEN:HBG016849 HOGENOM:HOG000231180 EMBL:X97750 IPI:IPI00583350
UniGene:Gga.649 ProteinModelPortal:Q98924 SMR:Q98924 STRING:Q98924
InParanoid:Q98924 Uniprot:Q98924
Length = 169
Score = 107 (42.7 bits), Expect = 0.00079, P = 0.00079
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 106 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 165
Query: 75 A 75
A
Sbjct: 166 A 166
>UNIPROTKB|Q90Z54 [details] [associations]
symbol:CDXB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GeneTree:ENSGT00530000063388 GO:GO:0000976 eggNOG:NOG291290
KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 CTD:1046
EMBL:AADN02013531 EMBL:AADN02013532 EMBL:AF353624 IPI:IPI00575574
RefSeq:NP_989945.1 UniGene:Gga.49855 SMR:Q90Z54
Ensembl:ENSGALT00000012401 GeneID:395320 KEGG:gga:395320
InParanoid:Q90Z54 OMA:YHHVPNM NextBio:20815405 Uniprot:Q90Z54
Length = 263
Score = 113 (44.8 bits), Expect = 0.00085, P = 0.00085
Identities = 30/83 (36%), Positives = 49/83 (59%)
Query: 15 KRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K +Y+ T Q + LEK ++ ++Y T KS++A +GL+E+QV WF +RR KE+++
Sbjct: 152 KEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKERKII 211
Query: 72 VDEAFVGGRQDRSSGVIQ-DRGS 93
+ + D S G +Q D GS
Sbjct: 212 KKKI---SQFDGSGGSVQSDSGS 231
>UNIPROTKB|F1NC59 [details] [associations]
symbol:F1NC59 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 OMA:RRYEISQ EMBL:AADN02000989
IPI:IPI00822649 Ensembl:ENSGALT00000037820 Uniprot:F1NC59
Length = 59
Score = 94 (38.1 bits), Expect = 0.00086, P = 0.00086
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
KR T Q + LEK + + Y T E + +++ + LT++QV WF +RR+K K+++
Sbjct: 3 KRCPYTKHQTLELEKEFLFNMYLTRERRLEISRTVHLTDRQVKIWFQNRRMKLKKMN 59
>RGD|1586210 [details] [associations]
symbol:Hoxc4 "homeo box C4" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA;ISO]
[GO:0051216 "cartilage development" evidence=IEA;ISO] [GO:0071837
"HMG box domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 94 (38.1 bits), Expect = 0.00086, P = 0.00086
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
QV+ LEK ++ ++Y T + ++A + L+E+Q+ WF +RR+K K+
Sbjct: 22 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 68
>UNIPROTKB|P18865 [details] [associations]
symbol:Hoxc4 "Homeobox protein Hox-C4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 94 (38.1 bits), Expect = 0.00086, P = 0.00086
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
QV+ LEK ++ ++Y T + ++A + L+E+Q+ WF +RR+K K+
Sbjct: 22 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 68
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 119 (46.9 bits), Expect = 0.00092, P = 0.00092
Identities = 23/66 (34%), Positives = 42/66 (63%)
Query: 3 SEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCH 62
SE K + +K R+ TP Q+ LE +NE ++P E+ ++Q++ ++GL +Q+ WF +
Sbjct: 13 SETEKKNKKKKRFHRH-TPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPRQIKFWFQN 71
Query: 63 RRLKEK 68
RR ++K
Sbjct: 72 RRTQKK 77
>WB|WBGene00004011 [details] [associations]
symbol:pha-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043282 "pharyngeal muscle development"
evidence=IMP] [GO:0042755 "eating behavior" evidence=IMP]
[GO:0042694 "muscle cell fate specification" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI;IMP] [GO:0002119 "nematode larval development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0002119 GO:GO:0042694 GO:GO:0030036 GO:GO:0040014
GO:GO:0042755 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887
GO:GO:0000976 GeneTree:ENSGT00680000099625 GO:GO:0043282 KO:K08024
EMBL:FO081140 RefSeq:NP_508131.3 ProteinModelPortal:Q21578
SMR:Q21578 EnsemblMetazoa:M6.3 GeneID:187454 KEGG:cel:CELE_M6.3
UCSC:M6.3 CTD:187454 WormBase:M6.3 InParanoid:Q21578 OMA:DEDEMPN
NextBio:935326 ArrayExpress:Q21578 Uniprot:Q21578
Length = 166
Score = 106 (42.4 bits), Expect = 0.00097, P = 0.00097
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVD----EA 75
T Q ALE ++ HKY + + + ++A+ + L+E+QV WF +RR K +R+ D +
Sbjct: 84 TNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNRRAKWRRVRKDGEDEDE 143
Query: 76 FVGGRQDRSSGVIQ 89
G RS G +Q
Sbjct: 144 MPNGASARSLGQLQ 157
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.128 0.373 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 513 485 0.00081 119 3 11 23 0.49 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 86
No. of states in DFA: 612 (65 KB)
Total size of DFA: 300 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 47.25u 0.09s 47.34t Elapsed: 00:00:28
Total cpu time: 47.26u 0.09s 47.35t Elapsed: 00:00:28
Start: Thu May 9 18:01:22 2013 End: Thu May 9 18:01:50 2013