BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010311
(513 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359479221|ref|XP_002279963.2| PREDICTED: uncharacterized protein LOC100265339 [Vitis vinifera]
Length = 528
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 281/517 (54%), Positives = 355/517 (68%), Gaps = 9/517 (1%)
Query: 6 NKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
NK+ EKN KRR KTP+QV ALEKFYNEHKYPTE MKS++AE+IGLTEKQ+SGWFCHRRL
Sbjct: 12 NKICEEKNKKRRLKTPSQVQALEKFYNEHKYPTESMKSELAEEIGLTEKQISGWFCHRRL 71
Query: 66 KEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCHD 125
K+K+L DEA GRQDRSSGVIQDRGSG RQDSCGSTK GDYR IDPREV+SR Y +
Sbjct: 72 KDKKLLEDEAGANGRQDRSSGVIQDRGSGYRQDSCGSTKHGDYRHIDPREVESRRFYGQE 131
Query: 126 FPATDLAYD-RNQYAAHASERDDTSSESSSFLQDRLYSESDKPYANETSRFVRQNGDVTP 184
F A DL Y+ R+ Y + S R DTSSESSS LQDR + +++ P+ ETS+ ++G V P
Sbjct: 132 FSAGDLNYEHRSHYTGNFSGRGDTSSESSSDLQDRFFPQNEDPFDVETSKLPTRSGIVMP 191
Query: 185 VRCNIGRSKEY-KPSGYLKVKGESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFE 243
+ +++ + +PSGYLKVKGE EN AI+AVKRQLGRHYREDGPPLGV+F PLPPGAFE
Sbjct: 192 INTKGTQNRGFVRPSGYLKVKGEIENVAITAVKRQLGRHYREDGPPLGVEFQPLPPGAFE 251
Query: 244 SPSGDPVNEPFYVGNSRWSNSPEVPEIDKPRALGTRYEVDSSKMDLQDSYIDE-NLNSKR 302
S D +EP+YVGNS S SP+ P + KP +L TRYEV SSK+ Q+S ++E N +
Sbjct: 252 SSIRDQDDEPYYVGNSIMSQSPDNPGVPKPPSLSTRYEVCSSKLASQNSCMEEANFGTMH 311
Query: 303 S-DYAGTKSHNQLKQKSPLLHYSNFSPHQNSSLNAYEDS---TPVYDGNHCYSLSSKHDA 358
D S+ QLKQK +YSN SP N S + +ED+ T + N Y + S
Sbjct: 312 GFDSRDNYSNRQLKQKGSFPNYSNLSPGWNFSKDMHEDAAGETSFVNSNKNYEMRSNPGI 371
Query: 359 EWMGLNSVMNHH-EPHGGKTNSEEAKPLLNDNHVVSSKMVRNSNYF-TRPSNFTLGISKS 416
E M L+SV N P+GGK SE+ L++ + K+V+ Y ++PSN L S S
Sbjct: 372 EGMRLSSVSNRRLHPYGGKVTSEQTDSWLHEYDDIRPKIVQQKEYLKSKPSNLILQQSGS 431
Query: 417 LDAKDKGTSTKMAKVKKLYKEKKAIKGLRDPVSVKTHLNNEMNVVKRLKGELPQRDYIAK 476
D + +G MAK++++ +E++A++ DPV K NEM V KR++ E P DY K
Sbjct: 432 CDDEGRGQLRNMAKMEEVCRERRAMREYSDPVGEKVQPTNEMRVAKRVRDESPPLDYAKK 491
Query: 477 ASYAEIPRWTNPIKGSAAEMPSSFSEDETAETNSSME 513
+S++E P W N IKGSA EMPSSFSEDETAET+SSM+
Sbjct: 492 SSFSETPTWGNQIKGSAMEMPSSFSEDETAETSSSMD 528
>gi|296083843|emb|CBI24231.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 277/517 (53%), Positives = 344/517 (66%), Gaps = 28/517 (5%)
Query: 6 NKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
NK+ EKN KRR KTP+QV ALEKFYNEHKYPTE MKS++AE+IGLTEKQ+SGWFCHRRL
Sbjct: 12 NKICEEKNKKRRLKTPSQVQALEKFYNEHKYPTESMKSELAEEIGLTEKQISGWFCHRRL 71
Query: 66 KEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCHD 125
K+K+L DEA GRQDRSSGVIQDRGSG RQDSCGSTK GDYR IDPREV+SR Y +
Sbjct: 72 KDKKLLEDEAGANGRQDRSSGVIQDRGSGYRQDSCGSTKHGDYRHIDPREVESRRFYGQE 131
Query: 126 FPATDLAYD-RNQYAAHASERDDTSSESSSFLQDRLYSESDKPYANETSRFVRQNGDVTP 184
F A DL Y+ R+ Y + S R DTSSESSS LQDR +G V P
Sbjct: 132 FSAGDLNYEHRSHYTGNFSGRGDTSSESSSDLQDR-------------------SGIVMP 172
Query: 185 VRCNIGRSKEY-KPSGYLKVKGESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFE 243
+ +++ + +PSGYLKVKGE EN AI+AVKRQLGRHYREDGPPLGV+F PLPPGAFE
Sbjct: 173 INTKGTQNRGFVRPSGYLKVKGEIENVAITAVKRQLGRHYREDGPPLGVEFQPLPPGAFE 232
Query: 244 SPSGDPVNEPFYVGNSRWSNSPEVPEIDKPRALGTRYEVDSSKMDLQDSYIDE-NLNSKR 302
S D +EP+YVGNS S SP+ P + KP +L TRYEV SSK+ Q+S ++E N +
Sbjct: 233 SSIRDQDDEPYYVGNSIMSQSPDNPGVPKPPSLSTRYEVCSSKLASQNSCMEEANFGTMH 292
Query: 303 S-DYAGTKSHNQLKQKSPLLHYSNFSPHQNSSLNAYEDS---TPVYDGNHCYSLSSKHDA 358
D S+ QLKQK +YSN SP N S + +ED+ T + N Y + S
Sbjct: 293 GFDSRDNYSNRQLKQKGSFPNYSNLSPGWNFSKDMHEDAAGETSFVNSNKNYEMRSNPGI 352
Query: 359 EWMGLNSVMNHH-EPHGGKTNSEEAKPLLNDNHVVSSKMVRNSNYF-TRPSNFTLGISKS 416
E M L+SV N P+GGK SE+ L++ + K+V+ Y ++PSN L S S
Sbjct: 353 EGMRLSSVSNRRLHPYGGKVTSEQTDSWLHEYDDIRPKIVQQKEYLKSKPSNLILQQSGS 412
Query: 417 LDAKDKGTSTKMAKVKKLYKEKKAIKGLRDPVSVKTHLNNEMNVVKRLKGELPQRDYIAK 476
D + +G MAK++++ +E++A++ DPV K NEM V KR++ E P DY K
Sbjct: 413 CDDEGRGQLRNMAKMEEVCRERRAMREYSDPVGEKVQPTNEMRVAKRVRDESPPLDYAKK 472
Query: 477 ASYAEIPRWTNPIKGSAAEMPSSFSEDETAETNSSME 513
+S++E P W N IKGSA EMPSSFSEDETAET+SSM+
Sbjct: 473 SSFSETPTWGNQIKGSAMEMPSSFSEDETAETSSSMD 509
>gi|255572213|ref|XP_002527046.1| hypothetical protein RCOM_0834050 [Ricinus communis]
gi|223533608|gb|EEF35346.1| hypothetical protein RCOM_0834050 [Ricinus communis]
Length = 643
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 265/515 (51%), Positives = 338/515 (65%), Gaps = 26/515 (5%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYN-----------------EHKYPTEEMKS 43
MHSEEN+VS EKN KR KTPAQ+MALEKFYN EH YPTEEMKS
Sbjct: 22 MHSEENRVSFEKNTKRILKTPAQIMALEKFYNVMLVIMFLKGKFLAFSPEHNYPTEEMKS 81
Query: 44 QVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGST 103
+VAE+IGLTEKQVS WFCHRRLK+K S DE + GRQDRSSG+IQDRGSGLRQDSCGST
Sbjct: 82 EVAEKIGLTEKQVSSWFCHRRLKDKNKSKDETYGNGRQDRSSGIIQDRGSGLRQDSCGST 141
Query: 104 KQGDYRSIDPREVQSRMLYCHDFPATDLAYDR-NQYAAHASERDDTSSESSSFLQDRLYS 162
KQGDYR +D +EV+S+ LY H+FPA DL YDR ++Y + + DDTSSESSS LQ++L+S
Sbjct: 142 KQGDYRKVDLKEVESQRLYGHNFPAADLTYDRTSRYTGNLNAMDDTSSESSSSLQEKLFS 201
Query: 163 ESDKPYANETSRFVRQNGDVTPVRCNIGRSKEYKPSGYLKVKGESENAAISAVKRQLGRH 222
+S+ Y +TS +V QNG P + + YKPSGYLKVK E ENAAI+AVKRQLG+H
Sbjct: 202 QSEDLYDMKTSGYVTQNGANRPFVPKVSNNMGYKPSGYLKVKNEIENAAITAVKRQLGKH 261
Query: 223 YREDGPPLGVDFDPLPPGAFESPSGDPVNEPFYVGN-SRWSNSPEVPEIDKPRALGTRYE 281
YREDGPPLGV+F LPPGAF S S DP+N FYVG+ +R + P++ I K + RYE
Sbjct: 262 YREDGPPLGVEFQALPPGAFSSSSRDPINGAFYVGDLARIHSPPDISGIHKQSSTSNRYE 321
Query: 282 VDSSKMDLQDSYID-ENLNSKR-SDYAGTKSHNQLKQKSPLLHYSNFSPHQNSSLNAYED 339
+ SSKM QD+++D N N K SD KSH+QLK+KS H + SP S+++ ++
Sbjct: 322 LYSSKMSSQDTFMDGANCNLKNTSDSLDKKSHHQLKRKSTFNH-PDSSPGGKSAMDKFDG 380
Query: 340 ---STPVYDGNHCYSLSSKHDAEWMGLNSVMNHHEPHGGKTNSEEAKPLLNDNHVVSSKM 396
T ++ Y + KH+AE + + NHH GGK SE+ L+D K+
Sbjct: 381 FAAETSMHSSKRNYKMGFKHNAEGIRSDIGSNHHYLDGGKVISEQTGRWLHDYGNGGPKI 440
Query: 397 VRNSNYFTRPSNFTLGISKSLDAKDKGTSTKMAKVKKLYKEKKAIKGLRDPVSVKTHLNN 456
V+ +++ ++P N LG SK D +++ ST+ AK +KL+ E K K RD V H N
Sbjct: 441 VQGNDFMSKP-NLILGSSKFHDKEERTQSTRPAKEEKLFGEMKGTKEYRDSVRGMNHPAN 499
Query: 457 EMNVVKRLKGELPQRDYIAKASYAEIPRWTNPIKG 491
EM V KR + E Q++Y+ KAS+ I R TN KG
Sbjct: 500 EMKVSKRFRDEFCQQEYVTKASFPNIARKTNSNKG 534
>gi|224105959|ref|XP_002313994.1| predicted protein [Populus trichocarpa]
gi|222850402|gb|EEE87949.1| predicted protein [Populus trichocarpa]
Length = 471
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 248/465 (53%), Positives = 313/465 (67%), Gaps = 7/465 (1%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+H EN+VS EKN+KR KTPAQV+ALE FYNEHKYPTEEMKS++A+QIGLTEKQ+S WF
Sbjct: 7 VHFGENRVSPEKNLKRTVKTPAQVVALENFYNEHKYPTEEMKSELADQIGLTEKQISSWF 66
Query: 61 CHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRM 120
CHRRLK+KRL DE GRQDRSSG+IQDRGSGLRQDSCGSTKQGDYR++DPREV+S+
Sbjct: 67 CHRRLKDKRLR-DEVCTNGRQDRSSGIIQDRGSGLRQDSCGSTKQGDYRNLDPREVESQR 125
Query: 121 LYCHDFPATDLAYDR-NQYAAHASERDDTSSESSSFLQDRLYSESDKPYANETSRFVRQN 179
LY DF DL YDR ++Y + + D+ SS SSS LQD+ + + PY ETS+++ QN
Sbjct: 126 LYGRDFHPADLTYDRTSRYTGNVTGIDNISSGSSSSLQDKFVCQREDPYDAETSKYLAQN 185
Query: 180 GDVTPVRCNIGRSKEYKPSGYLKVKGESENAAISAVKRQLGRHYREDGPPLGVDFDPLPP 239
G P+ S YKPSGYLKVKGE ENAAI+AVK QLGRHY+EDGPPLGV+F PLPP
Sbjct: 186 GAAMPLIPKGTDSFGYKPSGYLKVKGEIENAAITAVKMQLGRHYKEDGPPLGVEFQPLPP 245
Query: 240 GAFESPSGDPVNEPFYVGNSRWSNSPEVPEIDKPRALGTRYEVDSSKMDLQDSYID-ENL 298
GAF SPS DPV+ P YVG+ SP+V + K +LG RYEV S+KM DSY + N
Sbjct: 246 GAFASPSRDPVSGPIYVGDLAQMCSPDVSGVRKQSSLGARYEVYSTKMSSHDSYTEGANC 305
Query: 299 NSKRSDYAGTKSHNQLKQKSPLLHYSNFSPHQNSSLNAYED---STPVYDGNHCYSLSSK 355
N + SD KSH+ L+QK P + SN + NS+++ +D T Y Y +SSK
Sbjct: 306 NPEPSDSHDRKSHHHLEQK-PTYNGSNSNAGGNSAMDMPDDLAGETSAYVNKRHYRMSSK 364
Query: 356 HDAEWMGLNSVMNHHEPHGGKTNSEEAKPLLNDNHVVSSKMVRNSNYFTRPSNFTLGISK 415
H E +S+ H P G + NSE+ + L+D + K+V+ +NY ++ + G K
Sbjct: 365 HGFEERRSDSLSTHLGPSGRRVNSEKTEAWLHDCDNDNPKIVQRNNYTSKHPHLMRGSGK 424
Query: 416 SLDAKDKGTSTKMAKVKKLYKEKKAIKGLRDPVSVKTHLNNEMNV 460
SLD +++ T M K KL+ E K +KG DPV VK H +E V
Sbjct: 425 SLDTEERARCTIMEKEDKLHGEMKRMKGSHDPVRVKRHPTDETTV 469
>gi|356554131|ref|XP_003545402.1| PREDICTED: uncharacterized protein LOC100803515 [Glycine max]
Length = 527
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/518 (46%), Positives = 333/518 (64%), Gaps = 13/518 (2%)
Query: 6 NKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
NKVS EKN KR+ KTPAQ+ ALE FYNEHKYPTEEMK +AE++GLTEKQ+SGWFCHRRL
Sbjct: 12 NKVSNEKNKKRKLKTPAQLKALENFYNEHKYPTEEMKLVLAEELGLTEKQISGWFCHRRL 71
Query: 66 KEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCHD 125
K+KRL DEA GRQDRSSGVIQDRGSGL QDSCGS+K D+R +DP+EV+S LY H+
Sbjct: 72 KDKRLMKDEAVANGRQDRSSGVIQDRGSGLGQDSCGSSKHADHRYLDPKEVESHGLYNHE 131
Query: 126 FPATDLAYD-RNQYAAHASERDDTSSESSSFLQDRLYSESDKPYANETSRFVRQNGDVTP 184
D+ + RN+Y + S DDTSSESSSFLQ+RL+S+ PY E SR + NG + P
Sbjct: 132 LSVADMTHGCRNRYPENVSGVDDTSSESSSFLQERLFSQGLDPYDMEPSRHLTPNGALPP 191
Query: 185 VRCNIGRSKEYKPSGYLKVKGESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFES 244
+ + +KPSGYLKVKGE E+AAI+AVK+QLGRHY EDGP LG++FD LPPGAFE
Sbjct: 192 LNPKGAVNMGHKPSGYLKVKGEIEHAAITAVKKQLGRHYLEDGPLLGIEFDLLPPGAFEC 251
Query: 245 PSGDPVNEPFYVGNSRWSNSPEVPEIDKPRALGTRYEVDSSKMDLQDSYID-ENLNSKR- 302
+ DP NEP+ N NSPE+ + ++ +RY+ +K QD +++ + S
Sbjct: 252 QTADPANEPYSATNPLLLNSPEISAAKRQPSISSRYDSYYTKFSSQDPHMEGADFGSLHE 311
Query: 303 ---SDYAGTKSHNQLKQKSPLLHYSNFSPHQNSSLNAYEDST---PVYDGNHCYSLSSKH 356
D K+ +KQ+ PL Y+N P +NS + YEDST Y+ + +S+KH
Sbjct: 312 TDFQDKQDKKARQNIKQRQPLYGYTNHFPGRNSFPDLYEDSTGEASAYNSTKSHRMSTKH 371
Query: 357 DAEWMGLNSVMNHHEPHGGKTNSEEAKPLLNDNHVVSSK-MVRNSNYFTRPSNFTLGISK 415
E M +S NH + + K ++ +L+ ++ K M R+ + ++PS+
Sbjct: 372 GVEGMRSDSASNHSDHYEEKLAVKQKGLMLHGYDNINLKNMQRSEHVKSKPSSSIRNSRV 431
Query: 416 SLDAKDKGTSTKMAKVKKLYKEKKAIKGLRDPVSVKTHLNNEMNVVKRLKGELPQRDYIA 475
+D +++G S +MAK ++++K + K V L+NE+ V KR K ++ Q+ +
Sbjct: 432 PMDTEERGLSARMAK-EEMFKGDRKAKNTYCNVDGAGMLSNEIMVAKRAKVDMLQQYNVK 490
Query: 476 KASYAEIPRWTNPIKGSAAEMPSSFSEDETAETNSSME 513
K+ AE+ + I+ SAA++PSSFSEDETA+TNSS++
Sbjct: 491 KSPVAEMEQRK--IQRSAADLPSSFSEDETADTNSSLD 526
>gi|449444877|ref|XP_004140200.1| PREDICTED: uncharacterized protein LOC101207235 [Cucumis sativus]
gi|449480977|ref|XP_004156045.1| PREDICTED: uncharacterized LOC101207235 [Cucumis sativus]
Length = 506
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 254/524 (48%), Positives = 327/524 (62%), Gaps = 37/524 (7%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
MHSEENK S EKN KR+ KTP+Q++ALEKFYNEHKYPTEEMKSQ++E++GLTEKQ+SGWF
Sbjct: 9 MHSEENKDSTEKNKKRKLKTPSQLVALEKFYNEHKYPTEEMKSQLSEELGLTEKQISGWF 68
Query: 61 CHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRM 120
CHRRLK+KR + + RQDRSSGVIQD GSGL QDSCGSTK GDY IDPREV+S+
Sbjct: 69 CHRRLKDKRFC--DTYTSVRQDRSSGVIQDHGSGLAQDSCGSTKNGDYWHIDPREVESQK 126
Query: 121 LYCHDFPATDLAYDRNQYAAHASERDDTSSESSSFLQDRLYSESDKPYANETSRFVRQNG 180
Y H+ ++ R+QY + S ++TSSESSS L+DRL S+S+ PY E SR++ G
Sbjct: 127 PYGHELATDNVLERRSQYTENVSNMENTSSESSSSLKDRLLSQSENPYDTEVSRYLTHEG 186
Query: 181 DVTPVRCNIGRSKEYKPSGYLKVKGESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPG 240
+ P S YKPSGYLKVKGE ENAAI+AVKRQLG YREDGPPLGV+F PLPPG
Sbjct: 187 AIPPSNPKALSSLRYKPSGYLKVKGEVENAAITAVKRQLGVQYREDGPPLGVEFQPLPPG 246
Query: 241 AFESPSGDPVNEPFYVGNSRWSNSPEVPEIDKPRALGTRYEVDSSKMDLQDSYIDENLNS 300
AFESP+ P ++ +YVGN SP++ + K RA+G+RYEV SS M QDSY +E +
Sbjct: 247 AFESPAKGPSHDSYYVGNPLLPRSPDILTLKKQRAVGSRYEVHSSNMSSQDSYREEAAPT 306
Query: 301 KRSDYAGTKSHN---QLKQKSPLLHYSNFSPHQNSSLNAYEDSTPVYDGNHCYSLSSKHD 357
+ ++ N QLK+ S + ++ P QNS LN YE+S G +S SSK D
Sbjct: 307 GTTCRPESQEKNSVYQLKKGSNYYNKTDTFPRQNSPLNVYEES-----GGLTFSSSSKRD 361
Query: 358 AEW--------MGLNSVMNHHEPHGGKTNSEEAKPLLNDNHVVSSKMVRNSNYFTRPSNF 409
+ +SV N+H + K SE + L+++ V+S+ S Y
Sbjct: 362 HKMNPSYNFPRSRSDSVSNNHGSYSSKIVSEPTEMQLHNHGSVASRSFYRSGY------- 414
Query: 410 TLGISKSLDAKDKGTSTKMAKVKKLYKEKKAIKGLRDPVSVKTHLNNEMNVVKRLKGELP 469
LD K KM K + E+KAI DPV K NE+ VV R + + P
Sbjct: 415 -------LDYNPK----KMPK-EMFSGEEKAINESSDPVRGKIPPTNELAVVNRCQLDFP 462
Query: 470 QRDYIAKASYAEIPRWTNPIKGSAAEMPSSFSEDETAETNSSME 513
+ DY AKAS++E P N + EMP SF+ DE +T+SS++
Sbjct: 463 RSDYAAKASFSEKPGRKNLTRRPITEMPYSFTVDEAEDTSSSLD 506
>gi|356501401|ref|XP_003519513.1| PREDICTED: uncharacterized protein LOC100805913 [Glycine max]
Length = 526
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 241/518 (46%), Positives = 330/518 (63%), Gaps = 14/518 (2%)
Query: 6 NKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
NKVS EKN KR+ KTPAQ+ ALE FYNEHKYPTEEMK +AE++GLTEKQ+SGWFCHRRL
Sbjct: 12 NKVSNEKNKKRKLKTPAQLKALEDFYNEHKYPTEEMKLVLAEELGLTEKQISGWFCHRRL 71
Query: 66 KEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCHD 125
K+KRL DEA GRQDRSSGVIQDRGSGL QDSCGS+K D+R +DP+EV+S LY H+
Sbjct: 72 KDKRLMKDEAVANGRQDRSSGVIQDRGSGLGQDSCGSSKHADHRYLDPKEVESHGLYNHE 131
Query: 126 FPATDLAY-DRNQYAAHASERDDTSSESSSFLQDRLYSESDKPYANETSRFVRQNGDVTP 184
D+ + RN Y + S DDTSSESSSFLQ+R +S+ PY E SR + NG + P
Sbjct: 132 LSVADMTHRRRNHYPENVSGVDDTSSESSSFLQER-FSQGQDPYDMEPSRHLTPNGALPP 190
Query: 185 VRCNIGRSKEYKPSGYLKVKGESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFES 244
+ +KPSGYLKVKGE E+AAI+AV++QLGRHY EDGP LG++FDPLPPGAFE
Sbjct: 191 LNPKGAVKMGHKPSGYLKVKGEIEHAAITAVRKQLGRHYLEDGPLLGIEFDPLPPGAFEC 250
Query: 245 PSGDPVNEPFYVGNSRWSNSPEVPEIDKPRALGTRYEVDSSKMDLQDSYIDEN-----LN 299
+ D NEP+ V N SNSPE+ + +L +RY+ +K QDS+++
Sbjct: 251 QTADTANEPYSVANPLLSNSPEIFAAKRQPSLSSRYDSYYTKFRSQDSHMEGADFGSLHE 310
Query: 300 SKRSDYAGTKSHNQLKQKSPLLHYSNFSPHQNSSLNAYEDST---PVYDGNHCYSLSSKH 356
S D K+ +KQ+ L Y+N P +N+ + YEDST Y+ N + +S+KH
Sbjct: 311 SDFQDKQDKKACQNIKQRQSLYGYTNNFPGRNTFPDLYEDSTGEASAYNSNKSHRMSTKH 370
Query: 357 DAEWMGLNSVMNHHEPHGGKTNSEEAKPLLNDNHVVSSKMVRNSNYF-TRPSNFTLGISK 415
E M +S NH + + K ++ +L+ ++ K ++ S + ++PS+
Sbjct: 371 GVEGMRSDSASNHSDHYEEKLTVKQKTLMLHGYDNINPKNIQRSEHVKSKPSSSIHNSRV 430
Query: 416 SLDAKDKGTSTKMAKVKKLYKEKKAIKGLRDPVSVKTHLNNEMNVVKRLKGELPQRDYIA 475
+D +++G S +MAK ++++K + K V L+NE+ V KR K ++ Q+ +
Sbjct: 431 PMDTEERGLSARMAK-EEMFKGNRKAKNTYCDVEGAGMLSNEIMVAKRAKVDMLQQYNVK 489
Query: 476 KASYAEIPRWTNPIKGSAAEMPSSFSEDETAETNSSME 513
K+ AE+ I+ S AEMPSSFSEDETA+T+SS++
Sbjct: 490 KSPVAEM--ELKKIQRSVAEMPSSFSEDETADTSSSLD 525
>gi|224055313|ref|XP_002298475.1| predicted protein [Populus trichocarpa]
gi|222845733|gb|EEE83280.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 231/479 (48%), Positives = 303/479 (63%), Gaps = 15/479 (3%)
Query: 41 MKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSC 100
MKS++A++IGLTEKQ+S WFCHRRLK+KRL DE + GRQDRSS ++ DRGSGLRQDSC
Sbjct: 1 MKSELADRIGLTEKQISSWFCHRRLKDKRLK-DEGYTNGRQDRSSSILHDRGSGLRQDSC 59
Query: 101 GSTKQGDYRSIDPREVQSRMLYCHDFPATDLAYDR-NQYAAHASERDDTSSESSSFLQDR 159
GSTKQGDYR+IDPREV+S+ LY DF DL YDR ++Y + S DD SS SSS LQD+
Sbjct: 60 GSTKQGDYRNIDPREVESQRLYGQDFHTADLTYDRTSRYTGNVSGIDDISSGSSSSLQDK 119
Query: 160 LYSESDKPYANETSRFVRQNGDVTPVRCNIGRSKEYKPSGYLKVKGESENAAISAVKRQL 219
S+ + PY ETS+++ QNG P+ S YKPSGYLKVKGE ENAAI+AVK QL
Sbjct: 120 FVSQREDPYDTETSKYLAQNGASMPLIPKGAESFGYKPSGYLKVKGEIENAAITAVKMQL 179
Query: 220 GRHYREDGPPLGVDFDPLPPGAFESPSGDPVNEPFYVGNSRWSNSPEVPEIDKPRALGTR 279
GRHY+EDGPPLGVDF LPP AF SPS DPVN P YVG+ SP+V + K +L R
Sbjct: 180 GRHYKEDGPPLGVDFQSLPPSAFASPSRDPVNGPIYVGDLVGMRSPDVSGVRKQPSLSGR 239
Query: 280 YEVDSSKMDLQDSYID-ENLNSKR-SDYAGTKSHNQLKQKSPLLHYSNFSPHQNSSLNAY 337
YEV S+KM DSY + N N + SD KS + L+QKS + SN + NS+++
Sbjct: 240 YEVYSTKMSSHDSYTEGANCNPEHGSDSHERKSRHHLEQKS-TYNVSNSNAGGNSTMDMP 298
Query: 338 ED---STPVYDGNHCYSLSSKHDAEWMGLNSVMNHHEPHGGKTNSEEAKPLLNDNHVVSS 394
+D T VY Y SSKHD E +S HH P G + E+ + L+D +
Sbjct: 299 DDLAVETSVYRSKRNYRTSSKHDFEGRRSDSFATHHGPRGRR---EKTEAWLHDCDNDNP 355
Query: 395 KMVRNSNYFTRPSNFTLGISKSLDAKDKGTSTKMAKVKKLYKEKKAIKGLRDPVSVKTHL 454
K+ R ++Y ++PS+ LG KSL +++ TK K +KLY E K +KG D V VK H
Sbjct: 356 KIARRNDYMSKPSHSILGPGKSLVTEERAPFTKTEKEEKLYGEMKRMKGSHDSVRVKRHP 415
Query: 455 NNEMNVVKRLKGELPQRDYIAKASYAEIPRWTNPIKGS----AAEMPSSFSEDETAETN 509
+E V KR + + P+++++ KAS + + R TN +G ++P+ +ET+
Sbjct: 416 RDETAVAKRFRADFPRQEHVTKASVSGMRRRTNLTEGCRHCVTWDLPTDIGRLYVSETD 474
>gi|357493979|ref|XP_003617278.1| hypothetical protein MTR_5g089870 [Medicago truncatula]
gi|355518613|gb|AET00237.1| hypothetical protein MTR_5g089870 [Medicago truncatula]
Length = 544
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 248/556 (44%), Positives = 331/556 (59%), Gaps = 61/556 (10%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ EENKVS EK KR+ KTPAQ+ LEKFY EHKYPTEE+K +AE++ LTEKQVSGWF
Sbjct: 7 LQPEENKVSAEKFPKRKLKTPAQLKGLEKFYTEHKYPTEELKLAIAEELELTEKQVSGWF 66
Query: 61 CHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRM 120
CHRRLK+KRL +EA GRQDRSSGVIQDRGSGL QDSCGS+K GDY+ +DP+EV+S
Sbjct: 67 CHRRLKDKRLLKEEANANGRQDRSSGVIQDRGSGLGQDSCGSSKHGDYKYLDPKEVESNG 126
Query: 121 LYCHDFPATDLAYD-RNQYAAHAS-ERDDTSSESSSFLQDRLYSESDKPYANETSRFVRQ 178
LY D D+ Y RN ++ + S DDTSSESSS+LQ+R+Y + PY E SR+ +
Sbjct: 127 LYNRDLSVADMTYGRRNHFSENVSGMDDDTSSESSSYLQERMYPQGQDPYEMEPSRYSKA 186
Query: 179 NGDVTPV-RCNIGRSKEYKPSGYLKVKGESENAAISAVKRQLGRHYREDGPPLGVDFDPL 237
+ P N+G YKPSGYLKVKGE E+AAI+AVK+QLGR+Y+EDGP LGV+FDPL
Sbjct: 187 LPPLNPKGAINMG----YKPSGYLKVKGEIEHAAITAVKKQLGRNYQEDGPLLGVEFDPL 242
Query: 238 PPGAFESPSGDPVNEPFYVGNSRWSNSPEVPEIDKPRALGTRYEVDSSKMDLQDSYIDEN 297
PPGAFE + + V+EP+++ + NSPE+ + L +RY+ +K QD++++
Sbjct: 243 PPGAFECQTEEAVHEPYHIADPALLNSPEISTVKSRPGLSSRYDSYYTKHGSQDTHME-- 300
Query: 298 LNSKRSDYAGTKS-HNQLKQKSPLLHYSNFS----------PHQNSSLNAYEDSTPVYDG 346
D+ H Q KQ LH + P +NSSL+ YEDST G
Sbjct: 301 ----GVDFGSLHDVHVQDKQDKKALHGTKHRQTFQSNAGRFPGRNSSLDLYEDST----G 352
Query: 347 NHCYSLSSKH--DA----EWMGLNSVMNHHEPHG---------------GKTN------S 379
Y+++ H DA E + +S NH + + TN S
Sbjct: 353 EAAYNITKNHRKDAKRGVEGIRSDSTSNHSDRYEENLPVKHSDFLQYNYENTNQKNVQRS 412
Query: 380 EEAKPLLND-NHVVSSKMVRNSNYFTRPSNFTLGISKSLDAKDKGTSTKMAKVKKLYKEK 438
A L D ++V K R+ + ++PSN S+D +++G S++M K + ++
Sbjct: 413 VHADILQYDYDNVNPKKAPRSEHIKSKPSNSIHNSRGSVDTEERGLSSRMTKDELFKGDR 472
Query: 439 KAIKGLRDPVSVKTHLNNEMNVVKRLKGELPQRDYIAKASYAEI-PRWTNPIKGSAAEMP 497
K+ K RD L+NE V KRLK Q + + AEI PR T + SAAEMP
Sbjct: 473 KSKKQYRDAGGAGM-LSNETMVAKRLKANTFQPYNMKQVPVAEIEPRKT---QRSAAEMP 528
Query: 498 SSFSEDETAETNSSME 513
SSFSEDETA+T+SS++
Sbjct: 529 SSFSEDETADTSSSLD 544
>gi|356569985|ref|XP_003553173.1| PREDICTED: uncharacterized protein LOC100812697 [Glycine max]
Length = 381
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/345 (53%), Positives = 233/345 (67%), Gaps = 4/345 (1%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
HSEENK+S+EKN KRR KTPAQ+ LE FYN++KYPTEEMKS++A+++ LTEKQ+SGWF
Sbjct: 7 FHSEENKLSMEKNKKRRLKTPAQLKGLEDFYNDNKYPTEEMKSELADELELTEKQISGWF 66
Query: 61 CHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRM 120
CHRRLK+K++ DE GR DRSSGVIQDRGSGL QDSCGSTK DYR +DP+EV+S
Sbjct: 67 CHRRLKDKKMLNDEVCANGRHDRSSGVIQDRGSGLVQDSCGSTKHVDYRYLDPKEVESHG 126
Query: 121 LYCHDFPATDLAYDRN--QYAAHASERDDTSSESSSFLQDRLYSESDKPYANETSRFVRQ 178
LY H F A D+ Y N Y + S D+TSSESSS LQDRL + Y E S +
Sbjct: 127 LYNHGFSAADMMYGHNNHHYTENDSATDNTSSESSSSLQDRLLRQGKDLYDMEPSSHLTP 186
Query: 179 NGDVTPVRCNIGRSKEYKPSGYLKVKGESENAAISAVKRQLGRHYREDGPPLGVDFDPLP 238
NG + P+ + YKPSGYLKVKG+ E+AAI+AVK+QLG+HYREDGP L V+FD +P
Sbjct: 187 NGSLPPLNIKGANNLGYKPSGYLKVKGDIEHAAITAVKKQLGKHYREDGPLLTVEFDTIP 246
Query: 239 PGAFESPSGDPVNEPFYVGNSRWSNSPEVPEIDKPRALGTRYEVDSSKMDLQDSYIDE-N 297
P AFE D NE +Y N NSPEV + K +L +RY+ +K+ QDS++D +
Sbjct: 247 PEAFECQIADLANEAYYAANPALPNSPEVSAVKKQSSLSSRYDSYFTKISSQDSHMDRGD 306
Query: 298 LNSKR-SDYAGTKSHNQLKQKSPLLHYSNFSPHQNSSLNAYEDST 341
S SD+ KS + Q+ ++N PH+NSSL+ DST
Sbjct: 307 FGSLHDSDFQDKKSFQVINQRQNFQSFTNPLPHKNSSLDLNADST 351
>gi|356524168|ref|XP_003530704.1| PREDICTED: uncharacterized protein LOC100811885 [Glycine max]
Length = 400
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 185/345 (53%), Positives = 235/345 (68%), Gaps = 4/345 (1%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ SEENK+S+EKN KRR KTPAQ+ ALE FYN++KYPTEEMKS++A+++ LTEKQ+SGWF
Sbjct: 7 LQSEENKLSMEKNKKRRLKTPAQLKALEDFYNDNKYPTEEMKSELADELELTEKQISGWF 66
Query: 61 CHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRM 120
CHRRLK+K++ DE GRQDRSSGVIQDRGSGL QDSCGSTK YR +DP+EV+S
Sbjct: 67 CHRRLKDKKMLNDEVCANGRQDRSSGVIQDRGSGLVQDSCGSTKHVHYRYLDPKEVESHG 126
Query: 121 LYCHDFPATDLAYDR--NQYAAHASERDDTSSESSSFLQDRLYSESDKPYANETSRFVRQ 178
LY H F A D+ Y ++YA + S D+TSSESSS LQDRL + PY E S V
Sbjct: 127 LYNHGFSAADITYGHKNHRYAENDSATDNTSSESSSSLQDRLLCQGQDPYDMEPSSHVTP 186
Query: 179 NGDVTPVRCNIGRSKEYKPSGYLKVKGESENAAISAVKRQLGRHYREDGPPLGVDFDPLP 238
NG + P + +KPSGYLKVKGE E+AAI+AVK+QLG+HYREDGP L V+FD +P
Sbjct: 187 NGSLLPPNTKGANNMGHKPSGYLKVKGEIEHAAITAVKKQLGKHYREDGPLLSVEFDTIP 246
Query: 239 PGAFESPSGDPVNEPFYVGNSRWSNSPEVPEIDKPRALGTRYEVDSSKMDLQDS-YIDEN 297
P AFE D NE +Y N NSPEV + K +L +RY+ +K+ QDS + +
Sbjct: 247 PEAFECQIADLANEAYYAANPALPNSPEVSAVKKQSSLSSRYDSYFTKISSQDSQMVRGD 306
Query: 298 LNSKR-SDYAGTKSHNQLKQKSPLLHYSNFSPHQNSSLNAYEDST 341
S SD+ KSH+ + Q+ ++N PH+NS L+ DST
Sbjct: 307 FGSLHDSDFQYKKSHHDINQRRNFQSFTNPLPHKNSCLDFNADST 351
>gi|334186341|ref|NP_192234.2| homeobox-leucine zipper family protein [Arabidopsis thaliana]
gi|332656897|gb|AEE82297.1| homeobox-leucine zipper family protein [Arabidopsis thaliana]
Length = 507
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 224/524 (42%), Positives = 294/524 (56%), Gaps = 45/524 (8%)
Query: 6 NKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
+K S E + KR+ KTP QVMALE FYNEHKYPTEEMK ++AE++GLTEKQVSGWFCHRRL
Sbjct: 13 DKASTENSKKRKLKTPMQVMALENFYNEHKYPTEEMKGKLAEEVGLTEKQVSGWFCHRRL 72
Query: 66 KEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCHD 125
K+KR ++ G QDRSS V+QDRGSGLRQDSCGSTKQ DY + PREV+S+ LY
Sbjct: 73 KDKRHVKEDGNAIGSQDRSSVVLQDRGSGLRQDSCGSTKQTDYWNPKPREVESQRLYM-- 130
Query: 126 FPATDLAYDRNQYAAHASERDDTSSESSSFLQDRLYSESDKPYANETSRFVRQNGDVTPV 185
+A D TSS+ SS L+ L S D E+SR+V +
Sbjct: 131 --------------GNADGEDSTSSDRSSSLRKNLVSSKDGIRDVESSRYVAHKDVIQ-- 174
Query: 186 RCNIGRSKEY-KPSGYLKVKGESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFES 244
RS Y KPSGYLKVKGESEN AI+AVKRQLGR Y+EDGPPLGV+FDPLPPGAFE
Sbjct: 175 HPQFMRSYGYNKPSGYLKVKGESENFAITAVKRQLGRQYQEDGPPLGVEFDPLPPGAFEP 234
Query: 245 PSGDPVNEPFYVGNSRWSNSPEVPEIDKPRALGTRYEVD-SSKMDLQDSYIDENLNSKRS 303
+ V+EP YVGN R + P + K G YE+ SK+ D +++ +
Sbjct: 235 QTNPIVHEPIYVGNQRRPHLPHLLGTRKSFNPGPSYELARKSKLHSPDPDSEDDEHDDDD 294
Query: 304 DYA--------GTKSHNQLKQKSPLLHYSNFSPHQNSSLNAYEDS---TPVYDGNHCYSL 352
+ KS + + KSP + N P S ++ S PV + + +
Sbjct: 295 NIMVGMEPGLRDKKSFGEPRLKSPSTSFYNSVPRHKSFKETFKGSPREIPVTNSKKGW-I 353
Query: 353 SSKHDAEWMGLNSVMNHHEPHGGKTNSEEAKPLLNDNHVVSSKMVRNSNYFTRPSNFT-L 411
SSK AE + V N G +N E + DN++ S R + Y T+ S
Sbjct: 354 SSKSWAEGSRNHLVANVQNLSG--SNIETNQSHDYDNNI--SNGGRKTGYLTKSSKLLPP 409
Query: 412 GISKSLDAKDKGTSTKMAKVKKLYKEKKAIKGLRDPVSVKTHLNNEMNVVKRLKGELPQR 471
S+S ++ D+G S+ MA + + E+ +K R+ K H +E V KR+K Q+
Sbjct: 410 SRSRSPESMDRGPSSGMAGI--YHGERNQMKMQRE----KLHSTDEPPVAKRVKHGYIQQ 463
Query: 472 DYIAK-ASYAEIPRWTNPIKGSAAEMPSSFS-EDETAETNSSME 513
Y K +SY+EI + I S E+PSS S +DET E++SSM+
Sbjct: 464 VYAPKSSSYSEILERKSQINRSGVELPSSLSGDDETDESSSSMD 507
>gi|297813979|ref|XP_002874873.1| homeobox-leucine zipper family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297320710|gb|EFH51132.1| homeobox-leucine zipper family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 480
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 215/498 (43%), Positives = 276/498 (55%), Gaps = 40/498 (8%)
Query: 25 MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQDRS 84
MALE FYNEHKYPTE+MK ++AE++GLTEKQVSGWFCHRRLK+KR ++ G QDRS
Sbjct: 1 MALENFYNEHKYPTEDMKGKLAEEVGLTEKQVSGWFCHRRLKDKRHVKEDGNAVGSQDRS 60
Query: 85 SGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCHDFPATDLAYDRNQYAAHASE 144
S V+QDRGSGLRQDSCGSTKQ DY + PREV+S+ LY Y +A
Sbjct: 61 SVVLQDRGSGLRQDSCGSTKQTDYWNPKPREVESQRLYG------------GSYMGNADG 108
Query: 145 RDDTSSESSSFLQDRLYSESDKPYANETSRFVRQNGDVTPVRCNIGRSKEY-KPSGYLKV 203
D TSS+ SS L L S D E+SR+V + + RS Y KPSGYLKV
Sbjct: 109 EDSTSSDRSSSLHKNLVSSKDGIRDVESSRYVAHKDVIQ--NPQVMRSYGYNKPSGYLKV 166
Query: 204 KGESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESPSGDPVNEPFYVGNSRWSN 263
KGESEN AI+AVKRQLGR Y+EDGPPLGV+FDPLPPGAFE + V EP YVGN R S+
Sbjct: 167 KGESENFAITAVKRQLGRQYQEDGPPLGVEFDPLPPGAFEPQTNTIVQEPIYVGNQRRSH 226
Query: 264 SPEVPEIDKPRALGTRYEVD-SSKMDLQDSYIDENLNSKRSDYA--------GTKSHNQL 314
P V K G YE+ SKM D +++ + + KS +
Sbjct: 227 PPHVLGTRKSFNPGPSYELARKSKMHSPDPDSEDDDDDDDDNIMVGMEPGLRDKKSLGEP 286
Query: 315 KQKSPLLHYSNFSPHQNS---SLNAYEDSTPVYDGNHCYSLSSKHDAEWMGLNSVMNHHE 371
++KSP + N PH S +L V + + +SSK AE N + N H
Sbjct: 287 RRKSPSPSFYNSVPHHKSFKETLKGSPREISVTNSKNG-RISSKSWAEGSRNNMIANFHN 345
Query: 372 PHGGKTNSEEAKPLLNDNHVVSSKMVRNSNYFTRPSNFT-LGISKSLDAKDKGTSTKMAK 430
G +N E + D H+ + R + Y T+ S S+S D+ D+G S+ MA
Sbjct: 346 LSG--SNIETNQSHDYDKHIFNGG--RKTGYLTKSSKLLPPSRSRSPDSMDRGPSSGMA- 400
Query: 431 VKKLYKEKKAIKGLRDPVSVKTHLNNEMNVVKRLKGELPQRDYIAKASYAEIPRWTNPIK 490
K + E+ +K R+ K H +E V KR+K Q+ Y K+SY+EI + I
Sbjct: 401 -GKYHGERNQMKTHRE----KLHSTDEPPVAKRVKHGYIQQVYAPKSSYSEILERKSQIN 455
Query: 491 GSAAEMPSSFS-EDETAE 507
S E+P+S S +DET E
Sbjct: 456 RSGVELPTSLSGDDETDE 473
>gi|147810395|emb|CAN59966.1| hypothetical protein VITISV_022759 [Vitis vinifera]
Length = 245
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 170/218 (77%), Gaps = 2/218 (0%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+HSEENK+ EKN KRR KTP+QV ALEKFYNEHKYPTE MKS++AE+IGLTEKQ+SGWF
Sbjct: 12 VHSEENKICEEKNKKRRLKTPSQVQALEKFYNEHKYPTESMKSELAEEIGLTEKQISGWF 71
Query: 61 CHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRM 120
CHRRLK+K+L DEA GRQDRSSGVIQDRGSG RQDSCGSTK GDYR IDPREV+SR
Sbjct: 72 CHRRLKDKKLLEDEAGANGRQDRSSGVIQDRGSGYRQDSCGSTKHGDYRHIDPREVESRR 131
Query: 121 LYCHDFPATDLAYD-RNQYAAHASERDDTSSESSSFLQDRLYSESDKPYANETSRFVRQN 179
Y +F A DL Y+ R+ Y + S R DTSSESSS LQDR + +++ P+ ETS+ ++
Sbjct: 132 FYGQEFSAGDLNYEHRSHYTGNFSGRGDTSSESSSDLQDRFFPQNEDPFDVETSKLPTRS 191
Query: 180 GDVTPVRCNIGRSKEY-KPSGYLKVKGESENAAISAVK 216
G V P+ +++ + +PSGYLKVKGE EN AI+AVK
Sbjct: 192 GIVXPINTKGXQNRGFVRPSGYLKVKGEIENVAITAVK 229
>gi|4262153|gb|AAD14453.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|7270195|emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20152542|emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana]
gi|111074212|gb|ABH04479.1| At4g03250 [Arabidopsis thaliana]
Length = 476
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 214/505 (42%), Positives = 281/505 (55%), Gaps = 45/505 (8%)
Query: 25 MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQDRS 84
MALE FYNEHKYPTEEMK ++AE++GLTEKQVSGWFCHRRLK+KR ++ G QDRS
Sbjct: 1 MALENFYNEHKYPTEEMKGKLAEEVGLTEKQVSGWFCHRRLKDKRHVKEDGNAIGSQDRS 60
Query: 85 SGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCHDFPATDLAYDRNQYAAHASE 144
S V+QDRGSGLRQDSCGSTKQ DY + PREV+S+ LY +A
Sbjct: 61 SVVLQDRGSGLRQDSCGSTKQTDYWNPKPREVESQRLYM----------------GNADG 104
Query: 145 RDDTSSESSSFLQDRLYSESDKPYANETSRFVRQNGDVTPVRCNIGRSKEY-KPSGYLKV 203
D TSS+ SS L+ L S D E+SR+V + RS Y KPSGYLKV
Sbjct: 105 EDSTSSDRSSSLRKNLVSSKDGIRDVESSRYVAHKDVIQ--HPQFMRSYGYNKPSGYLKV 162
Query: 204 KGESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESPSGDPVNEPFYVGNSRWSN 263
KGESEN AI+AVKRQLGR Y+EDGPPLGV+FDPLPPGAFE + V+EP YVGN R +
Sbjct: 163 KGESENFAITAVKRQLGRQYQEDGPPLGVEFDPLPPGAFEPQTNPIVHEPIYVGNQRRPH 222
Query: 264 SPEVPEIDKPRALGTRYEVD-SSKMDLQDSYIDENLNSKRSDYA--------GTKSHNQL 314
P + K G YE+ SK+ D +++ + + KS +
Sbjct: 223 LPHLLGTRKSFNPGPSYELARKSKLHSPDPDSEDDEHDDDDNIMVGMEPGLRDKKSFGEP 282
Query: 315 KQKSPLLHYSNFSPHQNSSLNAYEDS---TPVYDGNHCYSLSSKHDAEWMGLNSVMNHHE 371
+ KSP + N P S ++ S PV + + +SSK AE + V N
Sbjct: 283 RLKSPSTSFYNSVPRHKSFKETFKGSPREIPVTNSKKGW-ISSKSWAEGSRNHLVANVQN 341
Query: 372 PHGGKTNSEEAKPLLNDNHVVSSKMVRNSNYFTRPSNFT-LGISKSLDAKDKGTSTKMAK 430
G +N E + DN++ S R + Y T+ S S+S ++ D+G S+ MA
Sbjct: 342 LSG--SNIETNQSHDYDNNI--SNGGRKTGYLTKSSKLLPPSRSRSPESMDRGPSSGMAG 397
Query: 431 VKKLYKEKKAIKGLRDPVSVKTHLNNEMNVVKRLKGELPQRDYIAK-ASYAEIPRWTNPI 489
+ + E+ +K R+ K H +E V KR+K Q+ Y K +SY+EI + I
Sbjct: 398 I--YHGERNQMKMQRE----KLHSTDEPPVAKRVKHGYIQQVYAPKSSSYSEILERKSQI 451
Query: 490 KGSAAEMPSSFS-EDETAETNSSME 513
S E+PSS S +DET E++SSM+
Sbjct: 452 NRSGVELPSSLSGDDETDESSSSMD 476
>gi|294462655|gb|ADE76873.1| unknown [Picea sitchensis]
Length = 371
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 69/118 (58%), Gaps = 12/118 (10%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KRR KTP+QV ALE Y EHKYPTE MK +++ ++GL+EKQV WF HRRLK+K+
Sbjct: 19 KRRLKTPSQVEALENIYAEHKYPTESMKGKLSRELGLSEKQVQRWFRHRRLKDKK----- 73
Query: 75 AFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCHDFPATDLA 132
G ++D S D GSG S +Q R+ R + R+L D+P+ LA
Sbjct: 74 ---GKKEDPDSNEELDAGSG----SNLQQQQHVVRTELGRSEKRRLLGISDYPSAVLA 124
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 94 GLRQDSCGSTKQG-DYRSIDPREVQS-RMLYCHDFPATDLAYDRNQYAAHASERDDTSSE 151
GL+Q ++KQ ++ + ++ ++ R + HD+P+ LA + D
Sbjct: 215 GLKQAGGSNSKQAKNWNRLTAKDGENHRFVNNHDYPSAVLAAELTDRELLKGNHDIVEDP 274
Query: 152 SSSFLQDRLYSESDKPYANETSRFVRQNGDVTPVRCNIGRSKEYKPSGYLKV------KG 205
S Q+R +S Y E R ++ + + RSK + G V +
Sbjct: 275 YVSLSQERSSLQSGSSYEMEARRLPSKSLNSFEIEA---RSKRREKEGLHMVVEPLYWQQ 331
Query: 206 ESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAF 242
E+ AISAVK QLGR ++EDGP LGV+FDPLPP AF
Sbjct: 332 AVEHQAISAVKVQLGRLFQEDGPMLGVEFDPLPPDAF 368
>gi|297845788|ref|XP_002890775.1| HB-1 [Arabidopsis lyrata subsp. lyrata]
gi|297336617|gb|EFH67034.1| HB-1 [Arabidopsis lyrata subsp. lyrata]
Length = 1705
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 102/242 (42%), Gaps = 72/242 (29%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR+ KTP Q+ LEK Y+E YP+E ++ ++E++ L+++Q+ WFCHRRLK+K
Sbjct: 43 KRQMKTPFQLETLEKVYSEETYPSEATRADLSEKLDLSDRQLQMWFCHRRLKDK------ 96
Query: 75 AFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLY--CHDFPATDLA 132
K G + VQS L H+ P
Sbjct: 97 -----------------------------KDGQSKKPAKSAVQSSALASSVHELPPAGSV 127
Query: 133 YDRNQYAAHASERDDTSSESSSFLQDRLYSESDKPYANETSRFVRQNGDVTPVRCNIGRS 192
+++ R D+ SES PY+N F + + R +
Sbjct: 128 PEQDS-------RSDSGSESGC-----------SPYSNSRRNFASGS---SSSRAEL--- 163
Query: 193 KEYKPSGYLKVKGESENAAISAVKRQL-------GRHYREDGPPLGVDFDPLPPGAFESP 245
EY G K E+ + V+R + G R+DGP LG++FDPLPPGAF +P
Sbjct: 164 DEYDTMG----KASYESRLSTMVRRAIVCIEAQLGEPLRDDGPILGMEFDPLPPGAFGTP 219
Query: 246 SG 247
G
Sbjct: 220 IG 221
>gi|168004355|ref|XP_001754877.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693981|gb|EDQ80331.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 2252
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 45/57 (78%)
Query: 13 NIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
N+KRR KTP Q+ ALE+ + E +YP E ++++++ Q+ L++KQ+ WFCHRRLK+++
Sbjct: 312 NLKRRMKTPVQLEALERVFAEDRYPAEAVRAELSTQLNLSDKQLQMWFCHRRLKDRK 368
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 218 QLGRHYREDGPPLGVDFDPLPPGAF 242
QLG RE GPPLG++FDPLPPGAF
Sbjct: 541 QLGEPLREVGPPLGLEFDPLPPGAF 565
>gi|224077058|ref|XP_002305113.1| predicted protein [Populus trichocarpa]
gi|222848077|gb|EEE85624.1| predicted protein [Populus trichocarpa]
Length = 1440
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 44/55 (80%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ KTP Q+ LEK Y YP+EEM+++++E++GL+++Q+ WFCHRRLK+K+
Sbjct: 14 KRQMKTPFQLETLEKAYATETYPSEEMRAELSEKLGLSDRQLQMWFCHRRLKDKK 68
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 211 AISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
AI+ V+ QLG REDGP LG++FDPLPP AF +P
Sbjct: 140 AIACVEAQLGEPLREDGPILGMEFDPLPPDAFGTP 174
>gi|242053941|ref|XP_002456116.1| hypothetical protein SORBIDRAFT_03g030782 [Sorghum bicolor]
gi|241928091|gb|EES01236.1| hypothetical protein SORBIDRAFT_03g030782 [Sorghum bicolor]
Length = 247
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 44/59 (74%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
EK +KR KTP Q+ LEK Y +YP+E M+ +++ +IGL+++Q+ WFCHRRLK+++
Sbjct: 53 EKPVKRMMKTPYQLEVLEKTYAAEQYPSEAMRLELSAKIGLSDRQLQMWFCHRRLKDRK 111
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Query: 188 NIGRSKEYKPSGYLKVKG-------ESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPG 240
+IGR + Y+P+ + +SE I++V+ +LG REDGP LG++FDPLPPG
Sbjct: 183 DIGR-RYYEPTPIMIAPAIPSMQLTQSELRVINSVESELGEPLREDGPALGIEFDPLPPG 241
Query: 241 AFESP 245
AF +P
Sbjct: 242 AFGAP 246
>gi|186478960|ref|NP_174164.2| homeobox-1 [Arabidopsis thaliana]
gi|332192854|gb|AEE30975.1| homeobox-1 [Arabidopsis thaliana]
Length = 1705
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 44/55 (80%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ KTP Q+ LEK Y+E KYP+E +++++E++ L+++Q+ WFCHRRLK+K+
Sbjct: 42 KRQMKTPFQLETLEKVYSEEKYPSEATRAELSEKLDLSDRQLQMWFCHRRLKDKK 96
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 211 AISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
AI ++ QLG R+DGP LG++FDPLPPGAF +P
Sbjct: 184 AIVCIEAQLGEPLRDDGPILGMEFDPLPPGAFGTP 218
>gi|242053937|ref|XP_002456114.1| hypothetical protein SORBIDRAFT_03g030770 [Sorghum bicolor]
gi|241928089|gb|EES01234.1| hypothetical protein SORBIDRAFT_03g030770 [Sorghum bicolor]
Length = 1842
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 44/59 (74%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
EK +KR KTP Q+ LEK Y +YP+E M+ +++ +IGL+++Q+ WFCHRRLK+++
Sbjct: 53 EKPVKRMMKTPYQLEVLEKTYAAEQYPSEAMRLELSAKIGLSDRQLQMWFCHRRLKDRK 111
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Query: 188 NIGRSKEYKPSGYLKVKG-------ESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPG 240
+IGR + Y+P+ + +SE I++V+ QLG REDGP LGV+FDPLPPG
Sbjct: 183 DIGR-RYYEPTPIMIAPAIPSMQLTQSELRVINSVESQLGEPLREDGPALGVEFDPLPPG 241
Query: 241 AFESP 245
AF +P
Sbjct: 242 AFGAP 246
>gi|302817814|ref|XP_002990582.1| hypothetical protein SELMODRAFT_428998 [Selaginella
moellendorffii]
gi|300141750|gb|EFJ08459.1| hypothetical protein SELMODRAFT_428998 [Selaginella
moellendorffii]
Length = 1015
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 44/55 (80%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ KTP+Q+ LE+ Y E KYP+E ++S+++ Q+ LT++QV WFCHRRLK+++
Sbjct: 7 KRKMKTPSQLEILERVYAEDKYPSEIVRSELSHQLNLTDRQVKMWFCHRRLKDRK 61
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 14/65 (21%)
Query: 181 DVTPVRCNIGRSKEYKPSGYLKVKGESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPG 240
+V+P+ C + S E AAI V+ QLG REDGP LG +FDPLPPG
Sbjct: 185 NVSPLDCRLSVSPEV--------------AAIRLVEEQLGEPMREDGPILGYEFDPLPPG 230
Query: 241 AFESP 245
AF++P
Sbjct: 231 AFDTP 235
>gi|6560763|gb|AAF16763.1|AC010155_16 F3M18.14 [Arabidopsis thaliana]
Length = 1819
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 44/55 (80%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ KTP Q+ LEK Y+E KYP+E +++++E++ L+++Q+ WFCHRRLK+K+
Sbjct: 77 KRQMKTPFQLETLEKVYSEEKYPSEATRAELSEKLDLSDRQLQMWFCHRRLKDKK 131
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 211 AISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESPSG 247
AI ++ QLG R+DGP LG++FDPLPPGAF +P G
Sbjct: 219 AIVCIEAQLGEPLRDDGPILGMEFDPLPPGAFGTPIG 255
>gi|414881059|tpg|DAA58190.1| TPA: putative homeodomain-like transcription factor superfamily
protein [Zea mays]
Length = 1287
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 44/59 (74%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
EK +KR KTP Q+ LEK Y +YP+E M+ +++ +IGL+++Q+ WFCHRRLK+++
Sbjct: 52 EKPVKRMMKTPYQLEVLEKTYAVEQYPSEAMRLELSAKIGLSDRQLQMWFCHRRLKDRK 110
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 28/35 (80%)
Query: 211 AISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
I++V+ QLG REDGP LGV+FDPLPPGAF +P
Sbjct: 211 VINSVESQLGEPLREDGPALGVNFDPLPPGAFGAP 245
>gi|56201850|dbj|BAD73300.1| homeobox transcription factor-like [Oryza sativa Japonica Group]
gi|56202087|dbj|BAD73616.1| homeobox transcription factor-like [Oryza sativa Japonica Group]
gi|125527213|gb|EAY75327.1| hypothetical protein OsI_03219 [Oryza sativa Indica Group]
Length = 244
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 45/59 (76%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
EK +KR K+P Q+ LEK Y +YP+E ++++++ +IGL+++Q+ WFCHRRLK+++
Sbjct: 45 EKTVKRMMKSPYQLEVLEKTYAVEQYPSETLRAELSAKIGLSDRQLQMWFCHRRLKDRK 103
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
SE I +V+ QLG R+DGP LG+DFDPLPPG+F +P
Sbjct: 200 SELRVIHSVESQLGEPLRDDGPVLGIDFDPLPPGSFGAP 238
>gi|125571531|gb|EAZ13046.1| hypothetical protein OsJ_02964 [Oryza sativa Japonica Group]
Length = 244
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 45/59 (76%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
EK +KR K+P Q+ LEK Y +YP+E ++++++ +IGL+++Q+ WFCHRRLK+++
Sbjct: 45 EKTVKRMMKSPYQLEVLEKTYAVEQYPSETLRAELSAKIGLSDRQLQMWFCHRRLKDRK 103
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
SE I +V+ QLG R+DGP LG+DFDPLPPG+F +P
Sbjct: 200 SELRVIHSVESQLGEPLRDDGPVLGIDFDPLPPGSFGAP 238
>gi|356515148|ref|XP_003526263.1| PREDICTED: uncharacterized protein LOC100797480 [Glycine max]
Length = 1768
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 5/115 (4%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
V E KR+ KT +Q+ LEK Y YP+E ++++++ ++ L+++Q+ WFCHRRLK+
Sbjct: 14 VEGENKSKRKMKTASQLEVLEKAYAAEAYPSEALRAELSVKLSLSDRQLQMWFCHRRLKD 73
Query: 68 ---KRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSR 119
K+L D + G GV Q G+ + +D CG G + +D R++ R
Sbjct: 74 RNAKKLQNDSSLAGAPAVGEEGVEQVTGADVGRD-CG-LASGPFDHLDSRKIVPR 126
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 211 AISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
++ V+RQLG REDGP LG++FD LPP AF +P
Sbjct: 159 VVAFVERQLGEPIREDGPILGMEFDSLPPDAFGAP 193
>gi|302811657|ref|XP_002987517.1| hypothetical protein SELMODRAFT_447019 [Selaginella
moellendorffii]
gi|300144671|gb|EFJ11353.1| hypothetical protein SELMODRAFT_447019 [Selaginella
moellendorffii]
Length = 1495
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 45/57 (78%)
Query: 13 NIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
N KR+ KTP+Q+ LE+ Y E KYP+E ++++++ ++ LT++Q+ WFCHRRLK+++
Sbjct: 18 NTKRKMKTPSQLEILERVYAEDKYPSEVVRAELSTKLSLTDRQLQMWFCHRRLKDRK 74
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 208 ENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESPSGDPVNEPFYVGNSRWSNSPEV 267
E I+ V++QLG REDGP LG +FDPLPPG F++ P++ + N+ +P
Sbjct: 182 EREVITLVEQQLGEPIREDGPVLGREFDPLPPGPFDT----PIDSSTFSLNAAELKAPGA 237
Query: 268 PEIDKPR 274
PE+ R
Sbjct: 238 PELGSSR 244
>gi|302812110|ref|XP_002987743.1| hypothetical protein SELMODRAFT_447089 [Selaginella
moellendorffii]
gi|300144635|gb|EFJ11318.1| hypothetical protein SELMODRAFT_447089 [Selaginella
moellendorffii]
Length = 1182
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 45/57 (78%)
Query: 13 NIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
N KR+ KTP+Q+ LE+ Y E KYP+E ++++++ ++ LT++Q+ WFCHRRLK+++
Sbjct: 18 NTKRKMKTPSQLEILERVYAEDKYPSEVVRAELSTKLSLTDRQLQMWFCHRRLKDRK 74
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 208 ENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESPSGDPVNEPFYVGNSRWSNSPEV 267
E I+ V++QLG REDGP LG +FDPLPPG F++ P++ + N+ +P
Sbjct: 182 EREVITLVEQQLGEPIREDGPVLGREFDPLPPGPFDT----PIDSSTFSLNAAELKAPGA 237
Query: 268 PEIDKPR 274
PE+ R
Sbjct: 238 PELGSSR 244
>gi|302803753|ref|XP_002983629.1| hypothetical protein SELMODRAFT_422900 [Selaginella
moellendorffii]
gi|300148466|gb|EFJ15125.1| hypothetical protein SELMODRAFT_422900 [Selaginella
moellendorffii]
Length = 603
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 44/55 (80%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ KTP+Q+ LE+ Y E KYP+E ++S+++ Q+ LT++QV WFCHRRLK+++
Sbjct: 7 KRKMKTPSQLEILERVYAEDKYPSEIVRSELSHQLNLTDRQVKMWFCHRRLKDRK 61
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 14/65 (21%)
Query: 181 DVTPVRCNIGRSKEYKPSGYLKVKGESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPG 240
+V+P+ C + S E AAI V+ QLG REDGP LG +FDPLPPG
Sbjct: 185 NVSPLDCRLSVSPEV--------------AAIRLVEEQLGEPMREDGPILGYEFDPLPPG 230
Query: 241 AFESP 245
AF++P
Sbjct: 231 AFDTP 235
>gi|284431782|gb|ADB84632.1| homeobox protein [Oryza sativa Japonica Group]
Length = 268
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 45/59 (76%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
EK +KR K+P Q+ LEK Y +YP+E ++++++ +IGL+++Q+ WFCHRRLK+++
Sbjct: 45 EKTVKRMMKSPYQLEVLEKTYAVEQYPSETLRAELSAKIGLSDRQLQMWFCHRRLKDRK 103
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
SE I +V+ QLG R+DGP LG+DFDPLPPG+F +P
Sbjct: 200 SELRVIHSVESQLGEPLRDDGPVLGIDFDPLPPGSFGAP 238
>gi|357130694|ref|XP_003566982.1| PREDICTED: uncharacterized protein LOC100827669 [Brachypodium
distachyon]
Length = 1845
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 45/59 (76%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
EK +KR KTP Q+ LE+ Y +YP+E M+++++ +IGL+++Q+ WFCHRRLK+++
Sbjct: 47 EKPVKRMMKTPYQLDVLEQTYLAEQYPSEAMRAELSVKIGLSDRQLQMWFCHRRLKDRK 105
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 206 ESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
++E I++V+ QLG REDGP LGV+FDPLPPGAF +P
Sbjct: 199 QAELRVINSVESQLGEPLREDGPVLGVEFDPLPPGAFGAP 238
>gi|19486|emb|CAA47871.1| homeobox transcription factor Hox7 [Solanum peruvianum]
Length = 157
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K KR+ KTP Q+ LE+ Y YP+E ++++++E++GLT++Q+ WFCHRRLK+K S
Sbjct: 12 KKPKRQMKTPFQLETLERVYAMETYPSEAIRAELSEKLGLTDRQLQMWFCHRRLKDKNTS 71
>gi|255553623|ref|XP_002517852.1| homeobox protein, putative [Ricinus communis]
gi|223542834|gb|EEF44370.1| homeobox protein, putative [Ricinus communis]
Length = 1784
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 43/55 (78%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ KT +Q+ LEK Y YP+EE++++++ Q+GLT++Q+ WFCHRRLK+++
Sbjct: 26 KRKMKTASQLEILEKTYAVETYPSEELRAELSAQLGLTDRQLQMWFCHRRLKDRK 80
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
+E AI+ V+ QLG REDGP LG++FDPLPP AF +P
Sbjct: 164 AELRAIAFVEAQLGEPLREDGPILGMEFDPLPPDAFGAP 202
>gi|356546621|ref|XP_003541723.1| PREDICTED: uncharacterized protein LOC100777465 [Glycine max]
Length = 1755
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 42/55 (76%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ KTP Q+ LEK Y YP+E M+ +++E++GL+++Q+ WFCHRRLK+K+
Sbjct: 43 KRQMKTPFQLETLEKAYAVENYPSETMRVELSEKLGLSDRQLQMWFCHRRLKDKK 97
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 27/35 (77%)
Query: 211 AISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
AI+ V+ QLG REDGP LGV+FDPLPP AF +P
Sbjct: 164 AIACVEAQLGEPLREDGPILGVEFDPLPPDAFGAP 198
>gi|222632557|gb|EEE64689.1| hypothetical protein OsJ_19544 [Oryza sativa Japonica Group]
Length = 1855
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 42/56 (75%)
Query: 14 IKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+KR KTP Q+ LE+ Y E YP E M+++++ ++GLT++Q+ WFCHRRLK+++
Sbjct: 58 VKRVMKTPYQLEVLERTYTEDPYPNETMRAELSVKLGLTDRQLQMWFCHRRLKDRK 113
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
+E+ I +V+R +G REDGP LGV+FDPLPPGAF +P
Sbjct: 203 AEHRVIDSVERLIGEPLREDGPVLGVEFDPLPPGAFGAP 241
>gi|449479573|ref|XP_004155639.1| PREDICTED: uncharacterized protein LOC101230914 [Cucumis sativus]
Length = 1750
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 42/55 (76%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ KTP Q+ LEK Y YP+E +++++E++GLT++Q+ WFCHRRLK+K+
Sbjct: 32 KRQMKTPFQLETLEKAYALETYPSESTRAELSEKLGLTDRQLQMWFCHRRLKDKK 86
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 211 AISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
AI+ V+ QLG REDGP LG++FDPLPP AF +P
Sbjct: 165 AIACVESQLGEPLREDGPILGIEFDPLPPDAFGAP 199
>gi|125554370|gb|EAY99975.1| hypothetical protein OsI_21979 [Oryza sativa Indica Group]
Length = 438
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 42/56 (75%)
Query: 14 IKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+KR KTP Q+ LE+ Y E YP E M+++++ ++GLT++Q+ WFCHRRLK+++
Sbjct: 56 VKRVMKTPYQLEVLERTYTEDPYPNETMRAELSVKLGLTDRQLQMWFCHRRLKDRK 111
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
+E+ I +V+R +G REDGP LGV+FDPLPPGAF +P
Sbjct: 201 AEHRVIDSVERLIGEPLREDGPVLGVEFDPLPPGAFGAP 239
>gi|224125578|ref|XP_002329839.1| predicted protein [Populus trichocarpa]
gi|222870901|gb|EEF08032.1| predicted protein [Populus trichocarpa]
Length = 1423
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 43/55 (78%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ KTP Q+ LE Y YP++EM+++++E++GL+++Q+ WFCHRRLK+++
Sbjct: 6 KRQMKTPFQLQTLENAYATDTYPSDEMRAELSEKLGLSDRQLQMWFCHRRLKDRK 60
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESPSGDPVNEPFYVGNS 259
+E AI+ V+ QLG REDGP LG++FDPLPP AF P +P +G S
Sbjct: 128 TELRAIACVEAQLGEPLREDGPILGMEFDPLPPDAFGEPIAAITEQPKRMGYS 180
>gi|359483496|ref|XP_002273559.2| PREDICTED: uncharacterized protein LOC100247033 [Vitis vinifera]
Length = 1729
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 42/55 (76%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ KTP Q+ LE+ Y YPTE +++++E++GL+++Q+ WFCHRRLK+K+
Sbjct: 11 KRQMKTPFQLQTLERAYALEPYPTEASRAELSEKLGLSDRQLQMWFCHRRLKDKK 65
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 211 AISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
I++V+ QLG R+DGP LG++FDPLPP AF +P
Sbjct: 140 VIASVEAQLGEPLRDDGPILGMEFDPLPPDAFGAP 174
>gi|147834372|emb|CAN65380.1| hypothetical protein VITISV_028554 [Vitis vinifera]
Length = 1797
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 42/55 (76%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ KTP Q+ LE+ Y YPTE +++++E++GL+++Q+ WFCHRRLK+K+
Sbjct: 29 KRQMKTPFQLQTLERAYALEPYPTEASRAELSEKLGLSDRQLQMWFCHRRLKDKK 83
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 211 AISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
I++V+ QLG R+DGP LG++FDPLPP AF +P
Sbjct: 158 VIASVEAQLGEPLRDDGPILGMEFDPLPPDAFGAP 192
>gi|124360728|gb|ABN08705.1| DDT; Homeodomain-related [Medicago truncatula]
Length = 1795
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 41/55 (74%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ KTP Q+ LEK Y YP+E + +++E++GL+++Q+ WFCHRRLK+K+
Sbjct: 43 KRQMKTPFQLEMLEKAYALETYPSETTRIELSEKLGLSDRQLQMWFCHRRLKDKK 97
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 211 AISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
AI+ V+ QLG REDGP LG++FDPLPP AF +P
Sbjct: 168 AIACVEAQLGEPLREDGPILGIEFDPLPPDAFGAP 202
>gi|357446737|ref|XP_003593644.1| Homeobox protein Hox-C4 [Medicago truncatula]
gi|355482692|gb|AES63895.1| Homeobox protein Hox-C4 [Medicago truncatula]
Length = 1796
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 41/55 (74%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ KTP Q+ LEK Y YP+E + +++E++GL+++Q+ WFCHRRLK+K+
Sbjct: 43 KRQMKTPFQLEMLEKAYALETYPSETTRIELSEKLGLSDRQLQMWFCHRRLKDKK 97
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 211 AISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
AI+ V+ QLG REDGP LG++FDPLPP AF +P
Sbjct: 168 AIACVEAQLGEPLREDGPILGIEFDPLPPDAFGAP 202
>gi|413946505|gb|AFW79154.1| putative homeodomain-like transcription factor superfamily protein
[Zea mays]
Length = 1832
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%)
Query: 14 IKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+KR KTP Q+ LE+ Y E YP E +++++ Q+ LT++Q+ WFCHRRLK+++
Sbjct: 48 VKRVMKTPYQLEVLERTYAEDSYPNETKRAELSVQLNLTDRQLQMWFCHRRLKDRK 103
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 206 ESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP-SGDPVNEPF 254
++E+ I++V+ +G R+DGP LG++FDPLPPGAF +P +P +PF
Sbjct: 190 QAEHRVINSVEALIGEPLRDDGPVLGIEFDPLPPGAFGTPIVPEPPRQPF 239
>gi|413948471|gb|AFW81120.1| putative homeodomain-like transcription factor superfamily
protein [Zea mays]
Length = 1841
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%)
Query: 14 IKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+KR KTP Q+ LE+ Y E YP E +++++ Q+ LT++Q+ WFCHRRLK+++
Sbjct: 43 VKRVMKTPYQLEVLERTYAEDSYPNETKRAELSVQLNLTDRQLQMWFCHRRLKDRK 98
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 206 ESENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
++E+ I +V+ +G R+DGP LG++FDPLPPGAF +P
Sbjct: 187 QAEHRVIDSVEALIGEPLRDDGPVLGIEFDPLPPGAFGAP 226
>gi|224132876|ref|XP_002327902.1| predicted protein [Populus trichocarpa]
gi|222837311|gb|EEE75690.1| predicted protein [Populus trichocarpa]
Length = 1746
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 43/59 (72%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
E KR+ KT +Q+ LEK Y YP+E ++++++ Q+GL+++Q+ WFCHRRLK+++
Sbjct: 26 ESKSKRKMKTASQLEILEKTYAADTYPSEAVRAELSVQLGLSDRQLQMWFCHRRLKDRK 84
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESPSG 247
+E AI+ V+ QLG REDGP LG++FDPLPP AF +P G
Sbjct: 164 AELRAIAFVEAQLGEPLREDGPILGIEFDPLPPDAFGAPIG 204
>gi|413950868|gb|AFW83517.1| putative homeodomain-like transcription factor superfamily protein
[Zea mays]
Length = 240
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 41/59 (69%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
EK +KR KTP Q+ LE Y YP+E + +++ +IGL+++Q+ WFCHRRLK+++
Sbjct: 45 EKPVKRVMKTPYQLEVLEYTYAVEHYPSEAKRLELSAKIGLSDRQLQMWFCHRRLKDRK 103
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 208 ENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESPSG 247
E I++V+ QLG REDGP LG++FDPLPPGAF +P G
Sbjct: 196 ELRVINSVESQLGEPLREDGPALGINFDPLPPGAFGAPIG 235
>gi|297740429|emb|CBI30611.3| unnamed protein product [Vitis vinifera]
Length = 1682
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 39/51 (76%)
Query: 19 KTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KTP Q+ LE+ Y YPTE +++++E++GL+++Q+ WFCHRRLK+K+
Sbjct: 2 KTPFQLQTLERAYALEPYPTEASRAELSEKLGLSDRQLQMWFCHRRLKDKK 52
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 211 AISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
I++V+ QLG R+DGP LG++FDPLPP AF +P
Sbjct: 127 VIASVEAQLGEPLRDDGPILGMEFDPLPPDAFGAP 161
>gi|225446457|ref|XP_002275272.1| PREDICTED: uncharacterized protein LOC100250601 [Vitis vinifera]
Length = 1772
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 43/59 (72%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
E KR+ KT +Q+ LEK Y YP+E ++++++ ++GL+++Q+ WFCHRRLK+++
Sbjct: 16 ENKSKRKMKTASQLEILEKTYAVETYPSETLRAELSAKLGLSDRQLQMWFCHRRLKDRK 74
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
SE AI+ V+ QLG REDGP LG++FDPLPP AF +P
Sbjct: 157 SELRAIAFVEAQLGEPLREDGPILGMEFDPLPPDAFGAP 195
>gi|302143341|emb|CBI21902.3| unnamed protein product [Vitis vinifera]
Length = 1870
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 43/59 (72%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
E KR+ KT +Q+ LEK Y YP+E ++++++ ++GL+++Q+ WFCHRRLK+++
Sbjct: 16 ENKSKRKMKTASQLEILEKTYAVETYPSETLRAELSAKLGLSDRQLQMWFCHRRLKDRK 74
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
SE AI+ V+ QLG REDGP LG++FDPLPP AF +P
Sbjct: 157 SELRAIAFVEAQLGEPLREDGPILGMEFDPLPPDAFGAP 195
>gi|255536725|ref|XP_002509429.1| homeobox protein, putative [Ricinus communis]
gi|223549328|gb|EEF50816.1| homeobox protein, putative [Ricinus communis]
Length = 1732
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 40/51 (78%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
KR+ KTP Q+ ALEK Y YP+E++++++++++ LT++Q+ WFCHRRL
Sbjct: 31 KRQMKTPFQLEALEKAYALDTYPSEKVRAELSQRLNLTDRQLQMWFCHRRL 81
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 4/41 (9%)
Query: 211 AISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESPSGDPVN 251
AI+ V+ QLG R+DGP LG++FDPLPP AF G+P++
Sbjct: 164 AIACVEAQLGEPLRDDGPILGMEFDPLPPDAF----GEPIS 200
>gi|357128519|ref|XP_003565920.1| PREDICTED: uncharacterized protein LOC100835009 [Brachypodium
distachyon]
Length = 1857
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV 72
KR KTP Q+ LEK Y + YP E + ++A ++ LT++Q+ WFCHRRLK+++ V
Sbjct: 46 KRVMKTPYQLQVLEKTYADDPYPNETTRVELAAKLELTDRQLQMWFCHRRLKDRKQPV 103
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 24/34 (70%)
Query: 212 ISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
I V+ +G REDGP LGV FDPLPPGAF +P
Sbjct: 193 IDYVQELIGEQLREDGPVLGVHFDPLPPGAFGTP 226
>gi|147775536|emb|CAN73827.1| hypothetical protein VITISV_003176 [Vitis vinifera]
Length = 533
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 42/55 (76%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ KT +Q+ LEK Y YP+E ++++++ ++GL+++Q+ WFCHRRLK+++
Sbjct: 222 KRKMKTASQLEILEKTYAVETYPSETLRAELSAKLGLSDRQLQMWFCHRRLKDRK 276
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESPSG 247
SE AI+ V+ QLG REDGP LG++FDPLPP AF +P G
Sbjct: 359 SELRAIAFVEAQLGEPLREDGPILGMEFDPLPPDAFGAPIG 399
>gi|224095585|ref|XP_002310414.1| predicted protein [Populus trichocarpa]
gi|222853317|gb|EEE90864.1| predicted protein [Populus trichocarpa]
Length = 1728
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 43/59 (72%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
E KR+ K+ +Q+ LEK Y+ YP+E +++++ Q+GL+++Q+ WFCHRRLK+++
Sbjct: 12 ESKSKRKMKSASQLEILEKTYSVDTYPSEAARAELSVQLGLSDRQLQMWFCHRRLKDRK 70
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
+E A++ V+ QLG REDGP LG++FDPLPP AF +P
Sbjct: 149 AELRAVAFVEAQLGEPLREDGPILGMEFDPLPPDAFGAP 187
>gi|218196552|gb|EEC78979.1| hypothetical protein OsI_19460 [Oryza sativa Indica Group]
Length = 208
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 39/51 (76%)
Query: 19 KTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KTP Q+ L++ Y E YP E ++++++ ++GLT+KQ+ WFCHRRLK+++
Sbjct: 2 KTPYQLEVLKRTYTEDLYPNETIRAELSVKLGLTDKQLQMWFCHRRLKDRK 52
>gi|334188190|ref|NP_001190470.1| Homeodomain-like transcriptional regulator [Arabidopsis thaliana]
gi|332007688|gb|AED95071.1| Homeodomain-like transcriptional regulator [Arabidopsis thaliana]
Length = 1507
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 41/59 (69%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
E KR+ KT AQ+ LE Y+ YP+E +++ ++ ++ L+++Q+ WFCHRRLKE++
Sbjct: 16 ESKSKRKMKTAAQLEVLENTYSAEPYPSEAIRADLSVKLNLSDRQLQMWFCHRRLKERK 74
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESPSGDPVNEP 253
+E AI V+ QLG R++GP LG++FDPLPPGAF G P+ P
Sbjct: 136 AEVRAIGYVEAQLGERLRDNGPVLGMEFDPLPPGAF----GMPIEMP 178
>gi|15241428|ref|NP_199231.1| Homeodomain-like transcriptional regulator [Arabidopsis thaliana]
gi|9759519|dbj|BAB10985.1| unnamed protein product [Arabidopsis thaliana]
gi|332007687|gb|AED95070.1| Homeodomain-like transcriptional regulator [Arabidopsis thaliana]
Length = 1694
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 41/59 (69%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
E KR+ KT AQ+ LE Y+ YP+E +++ ++ ++ L+++Q+ WFCHRRLKE++
Sbjct: 16 ESKSKRKMKTAAQLEVLENTYSAEPYPSEAIRADLSVKLNLSDRQLQMWFCHRRLKERK 74
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESPSGDPVNEP 253
+E AI V+ QLG R++GP LG++FDPLPPGAF G P+ P
Sbjct: 136 AEVRAIGYVEAQLGERLRDNGPVLGMEFDPLPPGAF----GMPIEMP 178
>gi|356567507|ref|XP_003551960.1| PREDICTED: uncharacterized protein LOC100791425 [Glycine max]
Length = 83
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 57/86 (66%), Gaps = 7/86 (8%)
Query: 428 MAKVKKLYKEKKAIKGLRDPVSVKTHLNNEMNVVKRLKGE-LPQRDYIAKASYAEI-PRW 485
MAK +K ++K K RDP V+ L NEM V KR K + L Q D + ++S AE+ PR
Sbjct: 1 MAKEEKFDGDRKVKKQYRDPDEVRA-LTNEMMVAKRAKVDPLEQYD-VKQSSVAELEPRK 58
Query: 486 TNPIKGSAAEMPSSFSEDETAETNSS 511
+ + SAAEMPSSFSEDETAET+SS
Sbjct: 59 S---QRSAAEMPSSFSEDETAETSSS 81
>gi|361068595|gb|AEW08609.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149574|gb|AFG56703.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149576|gb|AFG56704.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149578|gb|AFG56705.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149580|gb|AFG56706.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149582|gb|AFG56707.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149584|gb|AFG56708.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149586|gb|AFG56709.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149588|gb|AFG56710.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149590|gb|AFG56711.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149592|gb|AFG56712.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149594|gb|AFG56713.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149596|gb|AFG56714.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149598|gb|AFG56715.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149600|gb|AFG56716.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149602|gb|AFG56717.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149604|gb|AFG56718.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
gi|383149606|gb|AFG56719.1| Pinus taeda anonymous locus CL756Contig1_03 genomic sequence
Length = 58
Score = 58.9 bits (141), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/35 (77%), Positives = 30/35 (85%)
Query: 208 ENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAF 242
E+ AISAVK QLGR +REDGP LGV+FDPLPP AF
Sbjct: 21 EHQAISAVKAQLGRLFREDGPILGVEFDPLPPDAF 55
>gi|297794989|ref|XP_002865379.1| hypothetical protein ARALYDRAFT_494576 [Arabidopsis lyrata subsp.
lyrata]
gi|297311214|gb|EFH41638.1| hypothetical protein ARALYDRAFT_494576 [Arabidopsis lyrata subsp.
lyrata]
Length = 1684
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
E KR+ KT AQ+ LE Y YP+E +++ ++ ++ L+++Q+ WFCHRRLK+++
Sbjct: 14 ESKSKRKMKTAAQLEVLENTYAAEPYPSEAIRADLSVKLNLSDRQLQMWFCHRRLKDRK 72
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESPSGDPVNEP 253
+E AI V+ QLG R++GP LG++FDPLPPGAF G P+ P
Sbjct: 137 AEVRAIGYVEAQLGERLRDNGPILGMEFDPLPPGAF----GMPIEMP 179
>gi|255567182|ref|XP_002524572.1| hypothetical protein RCOM_1211540 [Ricinus communis]
gi|223536125|gb|EEF37780.1| hypothetical protein RCOM_1211540 [Ricinus communis]
Length = 1120
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 14 IKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
++ + K+P Q+ ALEKFY E KYP++ + ++A + LT KQV GWF RR ++K
Sbjct: 1 MEMKRKSPLQLQALEKFYAEQKYPSQMVMEELAGVLDLTFKQVQGWFIERRRRDK 55
>gi|297736146|emb|CBI24184.3| unnamed protein product [Vitis vinifera]
Length = 1188
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%)
Query: 17 RYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
R KTP Q+ LE Y+E YPT+ + A +GLT KQV GWF RR KEK
Sbjct: 23 RRKTPLQLKTLESLYSEDNYPTQRVMKDYAAALGLTYKQVRGWFFERRRKEK 74
>gi|356526922|ref|XP_003532064.1| PREDICTED: uncharacterized protein LOC100796990 [Glycine max]
Length = 83
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 56/86 (65%), Gaps = 7/86 (8%)
Query: 428 MAKVKKLYKEKKAIKGLRDPVSVKTHLNNEMNVVKRLKGE-LPQRDYIAKASYAEI-PRW 485
MAK +K ++K K RDP V+ L NEM V K K + L Q D + ++S AE+ PR
Sbjct: 1 MAKEEKFDGDRKIKKQYRDPDEVRV-LTNEMTVAKWAKVDPLEQYD-VKQSSVAELEPRK 58
Query: 486 TNPIKGSAAEMPSSFSEDETAETNSS 511
+ + SAAEMPSSFSEDETAET+SS
Sbjct: 59 S---QRSAAEMPSSFSEDETAETSSS 81
>gi|307111906|gb|EFN60140.1| hypothetical protein CHLNCDRAFT_56599 [Chlorella variabilis]
Length = 1852
Score = 56.2 bits (134), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 33/50 (66%)
Query: 19 KTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
KTP Q ALE + +YPTE+MK + +IGLT +QV WF HRR KEK
Sbjct: 428 KTPFQKEALEAAFALSQYPTEDMKRVLGSKIGLTAQQVGTWFTHRRRKEK 477
Score = 40.0 bits (92), Expect = 2.7, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 212 ISAVKRQLGRHYREDGPPLGVDFD--PLPPG 240
+ A K QLG +REDGPPLG +FD PL PG
Sbjct: 517 VEAAKAQLGVPFREDGPPLGFEFDEIPLLPG 547
>gi|340905254|gb|EGS17622.1| putative sequence-specific DNA binding protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 641
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ TP Q+ LE +N++ PT +++ ++AE+I +TE+ V WF +RR K K L
Sbjct: 92 QKNNKRQRATPDQLATLESEFNKNPTPTAQVRERIAEEINMTERSVQIWFQNRRAKIKML 151
Query: 71 S 71
+
Sbjct: 152 A 152
>gi|115722910|ref|XP_781650.2| PREDICTED: homeobox protein Hox-C9-like [Strongylocentrotus
purpuratus]
Length = 301
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
+L + KRR T Q+ LEK + H+Y T + ++++++ + L+E+QV WF +RR+K+
Sbjct: 216 AALPRRTKRRPYTKLQIFELEKEFQAHQYLTRDRRARLSQSLSLSERQVKIWFQNRRMKQ 275
Query: 68 KRLSVDEAFVGG-----RQDRSSG 86
K+++ E G D+SSG
Sbjct: 276 KKMNEREKRTGSSTGPKSSDKSSG 299
>gi|449433800|ref|XP_004134685.1| PREDICTED: uncharacterized protein LOC101220962 [Cucumis sativus]
Length = 1675
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 211 AISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESP 245
AI+ V+ QLG REDGP LG++FDPLPP AF +P
Sbjct: 91 AIACVESQLGEPLREDGPILGIEFDPLPPDAFGAP 125
>gi|384251194|gb|EIE24672.1| hypothetical protein COCSUDRAFT_46901 [Coccomyxa subellipsoidea
C-169]
Length = 1406
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
R KTP Q ALE Y+ + P++E++ + E+IGLT QV WF HRR K+K
Sbjct: 32 RALKTPLQKEALEAAYSINPLPSDEVRKALGERIGLTAHQVQIWFSHRRRKDK 84
>gi|440804571|gb|ELR25448.1| homeobox domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 663
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
++ ++R+ T QV+ LEK Y E K+P+ E+ E++G+ +V WF ++R KE+R+
Sbjct: 453 KRPVERKRATADQVVVLEKMYREDKFPSSELIRHTGERLGMKPSKVKNWFQNKRAKERRV 512
Query: 71 SV 72
+
Sbjct: 513 AA 514
>gi|291397484|ref|XP_002715817.1| PREDICTED: POU class 2 homeobox 1 [Oryctolagus cuniculus]
Length = 745
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E S +AEQ+ + ++ + WFC+RR K
Sbjct: 385 RTSIETNIR---------VALEKSFLENQKPTSEEISMIAEQLNMEKEVIRVWFCNRRQK 435
Query: 67 EKRL 70
EKR+
Sbjct: 436 EKRI 439
>gi|53470|emb|CAA49792.1| oct-1 [Mus musculus]
gi|1095487|prf||2109222B transcription factor oct-1a
Length = 377
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 17 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 67
Query: 67 EKRL 70
EKR+
Sbjct: 68 EKRI 71
>gi|58259745|ref|XP_567285.1| LIM-homeobox protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|58259747|ref|XP_567286.1| LIM-homeobox protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134116748|ref|XP_773046.1| hypothetical protein CNBJ3220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255666|gb|EAL18399.1| hypothetical protein CNBJ3220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229335|gb|AAW45768.1| LIM-homeobox protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229336|gb|AAW45769.1| LIM-homeobox protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 810
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
RR TP Q+ LE +Y+ + P +++ Q+A Q+G+T++ V WF +RR K K L+ EA
Sbjct: 165 RRRTTPEQLKVLEFWYDINPKPDNQLREQLAAQLGMTKRNVQVWFQNRRAKMKGLAKKEA 224
>gi|507133|gb|AAA20151.1| homeobox-containing protein, partial [Ephydatia fluviatilis]
Length = 157
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGG 79
T Q++ALE+ + + KY + +++ AE + LTE QV WF +RR KEKRL EA
Sbjct: 25 TSTQLIALERKFRQQKYLSVAERAEFAEYLKLTETQVKIWFQNRRAKEKRLHEAEA---E 81
Query: 80 RQDRSSGV-----IQDRGSGLRQDSCGSTKQ 105
R RS G +Q + + R C S Q
Sbjct: 82 RAARSLGFHFHMPMQSKMNTFRHPYCNSQYQ 112
>gi|321258478|ref|XP_003193960.1| LIM-homeobox protein [Cryptococcus gattii WM276]
gi|317460430|gb|ADV22173.1| LIM-homeobox protein, putative [Cryptococcus gattii WM276]
Length = 811
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
RR TP Q+ LE +Y+ + P +++ Q+A Q+G+T++ V WF +RR K K L+ EA
Sbjct: 165 RRRTTPDQLKVLEFWYDINPKPDNQLREQLAAQLGMTKRNVQVWFQNRRAKMKGLAKKEA 224
>gi|432102072|gb|ELK29891.1| POU domain, class 2, transcription factor 1 [Myotis davidii]
Length = 821
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 461 RTSIETNIR---------VALEKSFLENQKPTSEEITMIAEQLNMEKEVIRVWFCNRRQK 511
Query: 67 EKRL 70
EKR+
Sbjct: 512 EKRI 515
>gi|417412567|gb|JAA52662.1| Putative pou domain class 2 transcription factor 1-like isoform 1,
partial [Desmodus rotundus]
Length = 753
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 390 RTSIETNIR---------VALEKSFLENQKPTSEEITMIAEQLNMEKEVIRVWFCNRRQK 440
Query: 67 EKRL 70
EKR+
Sbjct: 441 EKRI 444
>gi|281212424|gb|EFA86584.1| putative homeobox transcription factor [Polysphondylium pallidum
PN500]
Length = 665
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR+ +P Q+ LE+ + H++P+ +++Q+A ++G+T + V WF +RR K + +
Sbjct: 138 KRKRTSPDQLKILERIFLAHQHPSLNLRNQLAIELGMTPRSVQIWFQNRRAKARNMEFRP 197
Query: 75 AFVGGRQ---DRSSGVIQDRG---SGLRQDSCGSTKQGD 107
G + D +G+ +G S + GS+ GD
Sbjct: 198 PLTGSSEHLYDSLTGLSSIKGDVYSNINDKQSGSSSPGD 236
>gi|28202253|sp|P31503.2|PO2F1_RAT RecName: Full=POU domain, class 2, transcription factor 1; AltName:
Full=NF-A1; AltName: Full=Octamer-binding protein 1;
Short=Oct-1; AltName: Full=Octamer-binding transcription
factor 1; Short=OTF-1
gi|575455|gb|AAA53185.1| Oct1, partial [Rattus norvegicus]
Length = 632
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 272 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 322
Query: 67 EKRL 70
EKR+
Sbjct: 323 EKRI 326
>gi|354480277|ref|XP_003502334.1| PREDICTED: POU domain, class 2, transcription factor 1-like
[Cricetulus griseus]
Length = 757
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 397 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 447
Query: 67 EKRL 70
EKR+
Sbjct: 448 EKRI 451
>gi|114431256|ref|NP_945151.2| POU domain, class 2, transcription factor 1 isoform L [Mus
musculus]
gi|148707266|gb|EDL39213.1| POU domain, class 2, transcription factor 1, isoform CRA_f [Mus
musculus]
Length = 758
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 398 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 448
Query: 67 EKRL 70
EKR+
Sbjct: 449 EKRI 452
>gi|13445249|emb|CAC34943.1| Oct-1L [Mus musculus]
Length = 758
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 398 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 448
Query: 67 EKRL 70
EKR+
Sbjct: 449 EKRI 452
>gi|281306783|ref|NP_001094109.1| POU domain, class 2, transcription factor 1 [Rattus norvegicus]
gi|149058150|gb|EDM09307.1| POU domain, class 2, transcription factor 1, isoform CRA_c [Rattus
norvegicus]
Length = 768
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 408 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 458
Query: 67 EKRL 70
EKR+
Sbjct: 459 EKRI 462
>gi|344252692|gb|EGW08796.1| hypothetical protein I79_008847 [Cricetulus griseus]
Length = 621
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 276 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 326
Query: 67 EKRL 70
EKR+
Sbjct: 327 EKRI 330
>gi|114431254|ref|NP_945150.2| POU domain, class 2, transcription factor 1 isoform Z [Mus
musculus]
Length = 769
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 409 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 459
Query: 67 EKRL 70
EKR+
Sbjct: 460 EKRI 463
>gi|21070381|gb|AAM34281.1|AF508939_1 POU domain transcription factor Oct-1B [Mus musculus]
gi|148707262|gb|EDL39209.1| POU domain, class 2, transcription factor 1, isoform CRA_b [Mus
musculus]
Length = 746
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 386 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 436
Query: 67 EKRL 70
EKR+
Sbjct: 437 EKRI 440
>gi|53472|emb|CAA48423.1| Oct-1B protein [Mus musculus]
Length = 746
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 386 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 436
Query: 67 EKRL 70
EKR+
Sbjct: 437 EKRI 440
>gi|149058153|gb|EDM09310.1| POU domain, class 2, transcription factor 1, isoform CRA_f [Rattus
norvegicus]
Length = 757
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 397 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 447
Query: 67 EKRL 70
EKR+
Sbjct: 448 EKRI 451
>gi|114431252|ref|NP_035267.2| POU domain, class 2, transcription factor 1 isoform A [Mus
musculus]
gi|26390039|dbj|BAC25832.1| unnamed protein product [Mus musculus]
Length = 793
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 409 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 459
Query: 67 EKRL 70
EKR+
Sbjct: 460 EKRI 463
>gi|114431258|ref|NP_945152.2| POU domain, class 2, transcription factor 1 isoform B [Mus
musculus]
gi|148922517|gb|AAI46306.1| POU domain, class 2, transcription factor 1 [synthetic construct]
gi|151555541|gb|AAI48749.1| POU domain, class 2, transcription factor 1 [synthetic construct]
Length = 782
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 398 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 448
Query: 67 EKRL 70
EKR+
Sbjct: 449 EKRI 452
>gi|414380|gb|AAB28234.1| transcription factor Oct-1, partial [Mus sp.]
Length = 739
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 379 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 429
Query: 67 EKRL 70
EKR+
Sbjct: 430 EKRI 433
>gi|30179807|sp|P25425.3|PO2F1_MOUSE RecName: Full=POU domain, class 2, transcription factor 1; AltName:
Full=NF-A1; AltName: Full=Octamer-binding protein 1;
Short=Oct-1; AltName: Full=Octamer-binding transcription
factor 1; Short=OTF-1
gi|148707265|gb|EDL39212.1| POU domain, class 2, transcription factor 1, isoform CRA_e [Mus
musculus]
Length = 770
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 386 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 436
Query: 67 EKRL 70
EKR+
Sbjct: 437 EKRI 440
>gi|121308926|dbj|BAF43728.1| transcription factor Hox11/13c [Metacrinus rotundus]
Length = 246
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 43/67 (64%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
+ + KRR + Q+ LEK + H+Y T + ++++++ + L+E+QV WF +RR+K+
Sbjct: 170 ATFPRRTKRRPYSKVQIFELEKEFQLHQYLTRDRRARLSQSLTLSERQVKIWFQNRRMKQ 229
Query: 68 KRLSVDE 74
K+L+ E
Sbjct: 230 KKLNEKE 236
>gi|50540018|ref|NP_001002475.1| homeobox protein Nkx-6.1 [Danio rerio]
gi|49901142|gb|AAH76337.1| NK6 transcription factor related, locus 1 (Drosophila) [Danio
rerio]
gi|182888702|gb|AAI64096.1| Nkx6.1 protein [Danio rerio]
Length = 312
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+N V L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 175 QNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 234
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K KR + + A +QD
Sbjct: 235 QNRRTKWRKRHAAEMASAKKKQD 257
>gi|53466|emb|CAA48422.1| Oct-1A protein [Mus musculus]
Length = 770
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 386 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 436
Query: 67 EKRL 70
EKR+
Sbjct: 437 EKRI 440
>gi|357448585|ref|XP_003594568.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
gi|355483616|gb|AES64819.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
Length = 160
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
+PAQ + LE+ + KYPT + KS++AE++GL KQV+ WF ++R
Sbjct: 26 SPAQRLRLEEIFQTIKYPTNKQKSEIAEELGLQPKQVNWWFTYKR 70
>gi|40806470|gb|AAR92144.1| transcription factor Nkx6.1 [Danio rerio]
Length = 312
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+N V L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 175 QNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 234
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K KR + + A +QD
Sbjct: 235 QNRRTKWRKRHAAEMASAKKKQD 257
>gi|151935651|gb|ABS18807.1| Mox [Flaccisagitta enflata]
Length = 291
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
T Q+ ALEK +N+H Y T + ++A + LTE+QV WF +RR+K KR+
Sbjct: 185 TKQQIKALEKEFNQHNYLTRLRRYEIAVALDLTERQVKVWFQNRRMKWKRV 235
>gi|260831460|ref|XP_002610677.1| hypothetical protein BRAFLDRAFT_117908 [Branchiostoma floridae]
gi|229296044|gb|EEN66687.1| hypothetical protein BRAFLDRAFT_117908 [Branchiostoma floridae]
Length = 755
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E N++ +ALEK + ++ PT E +AEQ+G+ ++ V WFC+RR K
Sbjct: 473 RTSIETNVR---------VALEKAFIQNPKPTSEEIGIIAEQLGMEKEVVRVWFCNRRQK 523
Query: 67 EKRL 70
EKR+
Sbjct: 524 EKRI 527
>gi|357448589|ref|XP_003594570.1| Homeobox-leucine zipper protein ROC1 [Medicago truncatula]
gi|355483618|gb|AES64821.1| Homeobox-leucine zipper protein ROC1 [Medicago truncatula]
Length = 160
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
+PAQ + LE+ + KYPT + KS++AE++GL KQV+ WF ++R
Sbjct: 26 SPAQRLRLEEIFQTIKYPTNKQKSEIAEELGLQPKQVNWWFTYKR 70
>gi|168029073|ref|XP_001767051.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681793|gb|EDQ68217.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 447
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 207 SENAAISAVKRQLGRHYREDGPPLGVDFDPLPPGAFESPSGDPVNE-PFYVGNSR 260
+E AI AV+ QL REDGPPLG +FDPLPP AF + P+ E P G SR
Sbjct: 314 AERQAIIAVESQLCGPLREDGPPLGFEFDPLPPRAF---TELPITEVPHNAGVSR 365
>gi|148707264|gb|EDL39211.1| POU domain, class 2, transcription factor 1, isoform CRA_d [Mus
musculus]
Length = 717
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 357 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 407
Query: 67 EKRL 70
EKR+
Sbjct: 408 EKRI 411
>gi|390357047|ref|XP_001195838.2| PREDICTED: homeobox protein Hox-A9-like [Strongylocentrotus
purpuratus]
Length = 296
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 41/63 (65%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
+ KRR + Q++ LEK + E+ Y T E ++++A+ + LT++QV WF +RR+K K ++
Sbjct: 206 RRTKRRPYSKLQIIELEKAFQENMYLTRERRTRIADSLNLTDRQVKIWFQNRRMKMKNMT 265
Query: 72 VDE 74
E
Sbjct: 266 ERE 268
>gi|330844803|ref|XP_003294302.1| hypothetical protein DICPUDRAFT_159280 [Dictyostelium purpureum]
gi|325075256|gb|EGC29167.1| hypothetical protein DICPUDRAFT_159280 [Dictyostelium purpureum]
Length = 486
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 9 SLEKNIKRRYKT-PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
SL N K+R +T P Q+ LE+ + K P+++++ ++A Q+G++ ++V WF ++R K
Sbjct: 201 SLSSNKKKRQRTSPEQLAILEQIFETDKMPSQQIRVRLANQLGMSSRRVQIWFQNKRAKV 260
Query: 68 KR 69
KR
Sbjct: 261 KR 262
>gi|149058149|gb|EDM09306.1| POU domain, class 2, transcription factor 1, isoform CRA_b [Rattus
norvegicus]
Length = 723
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 408 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 458
Query: 67 EKRL 70
EKR+
Sbjct: 459 EKRI 462
>gi|53468|emb|CAA49791.1| oct-1 [Mus musculus]
gi|1095486|prf||2109222A transcription factor oct-1b
Length = 717
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 357 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 407
Query: 67 EKRL 70
EKR+
Sbjct: 408 EKRI 411
>gi|148707261|gb|EDL39208.1| POU domain, class 2, transcription factor 1, isoform CRA_a [Mus
musculus]
Length = 701
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 386 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 436
Query: 67 EKRL 70
EKR+
Sbjct: 437 EKRI 440
>gi|53474|emb|CAA48424.1| Oct-1C protein [Mus musculus]
Length = 701
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 386 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 436
Query: 67 EKRL 70
EKR+
Sbjct: 437 EKRI 440
>gi|332024155|gb|EGI64371.1| Homeobox protein Hox-A4 [Acromyrmex echinatior]
Length = 353
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 10 LEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+E+ R+ T Q++ LE + HKY ++ ++ +A+ I LTE+QV WF +RR+KEK+
Sbjct: 224 IEQKRTRQTYTRTQILELETEFRLHKYLAKKQRTMLAQNISLTERQVKIWFQNRRMKEKK 283
>gi|53477|emb|CAA39679.1| Oct-1 protein [Mus musculus]
Length = 608
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 380 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 430
Query: 67 EKRL 70
EKR+
Sbjct: 431 EKRI 434
>gi|149058154|gb|EDM09311.1| POU domain, class 2, transcription factor 1, isoform CRA_g [Rattus
norvegicus]
Length = 607
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 379 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 429
Query: 67 EKRL 70
EKR+
Sbjct: 430 EKRI 433
>gi|148707263|gb|EDL39210.1| POU domain, class 2, transcription factor 1, isoform CRA_c [Mus
musculus]
Length = 608
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 380 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 430
Query: 67 EKRL 70
EKR+
Sbjct: 431 EKRI 434
>gi|31620894|emb|CAD35744.1| ubiquitous transcription factor, isoform Oct-1rb [Mus musculus]
Length = 568
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 340 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 390
Query: 67 EKRL 70
EKR+
Sbjct: 391 EKRI 394
>gi|348565865|ref|XP_003468723.1| PREDICTED: POU domain, class 2, transcription factor 1-like [Cavia
porcellus]
Length = 745
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 385 RTSIETNIRA---------ALEKSFLENQKPTSEEITLIAEQLNMEKEVIRVWFCNRRQK 435
Query: 67 EKRL 70
EKR+
Sbjct: 436 EKRI 439
>gi|440808052|gb|AGC24169.1| Phox2 [Sepia officinalis]
Length = 336
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 2 HSEENKVSLEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
HS EN ++ EK +RR +T AQ+ LEK + E YP + ++A +I LTE +V
Sbjct: 119 HSHENSLNPEKRKQRRIRTTFTSAQLKELEKAFAETHYPDIYTREEIAMKIDLTEARVQV 178
Query: 59 WFCHRRLKEKRL 70
WF +RR K +++
Sbjct: 179 WFQNRRAKFRKM 190
>gi|410985785|ref|XP_003999197.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Felis catus]
Length = 756
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 397 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQK 447
Query: 67 EKRL 70
EKR+
Sbjct: 448 EKRI 451
>gi|351696239|gb|EHA99157.1| POU domain, class 2, transcription factor 1, partial
[Heterocephalus glaber]
Length = 750
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 390 RTSIETNIRA---------ALEKSFLENQKPTSEEITLIAEQLNMEKEVIRVWFCNRRQK 440
Query: 67 EKRL 70
EKR+
Sbjct: 441 EKRI 444
>gi|31620892|emb|CAD35743.1| ubiquitous transcription factor, isoform Oct-1ra [Mus musculus]
Length = 650
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 398 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 448
Query: 67 EKRL 70
EKR+
Sbjct: 449 EKRI 452
>gi|397508400|ref|XP_003824644.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 2
[Pan paniscus]
Length = 755
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 395 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 445
Query: 67 EKRL 70
EKR+
Sbjct: 446 EKRI 449
>gi|195435093|ref|XP_002065536.1| GK15505 [Drosophila willistoni]
gi|194161621|gb|EDW76522.1| GK15505 [Drosophila willistoni]
Length = 614
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 26 ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL--SVDEAFVGGRQDR 83
ALEK + ++ PT E SQ+A+++G+ ++ V WFC+RR KEKR+ S+D G D
Sbjct: 549 ALEKAFMANQKPTSEEISQLADRLGMEKEVVRVWFCNRRQKEKRINPSLDSPTGGDDMDE 608
Query: 84 S 84
S
Sbjct: 609 S 609
>gi|301784019|ref|XP_002927423.1| PREDICTED: POU domain, class 2, transcription factor 1-like
[Ailuropoda melanoleuca]
Length = 756
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 397 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQK 447
Query: 67 EKRL 70
EKR+
Sbjct: 448 EKRI 451
>gi|21927972|gb|AAM77920.1| OCT-1 protein [Homo sapiens]
Length = 755
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 395 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 445
Query: 67 EKRL 70
EKR+
Sbjct: 446 EKRI 449
>gi|297281430|ref|XP_001088884.2| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Macaca mulatta]
Length = 766
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 406 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 456
Query: 67 EKRL 70
EKR+
Sbjct: 457 EKRI 460
>gi|410985787|ref|XP_003999198.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 2
[Felis catus]
Length = 744
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 385 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQK 435
Query: 67 EKRL 70
EKR+
Sbjct: 436 EKRI 439
>gi|297281436|ref|XP_002802099.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 5
[Macaca mulatta]
gi|355746170|gb|EHH50795.1| hypothetical protein EGM_01675 [Macaca fascicularis]
Length = 755
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 395 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 445
Query: 67 EKRL 70
EKR+
Sbjct: 446 EKRI 449
>gi|303314093|ref|XP_003067055.1| Homeoprotein, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240106723|gb|EER24910.1| Homeoprotein, putative [Coccidioides posadasii C735 delta SOWgp]
Length = 615
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE +N++ PT ++ ++AE+I +TE+ V WF +RR K K +
Sbjct: 67 QKNHKRQRATQDQLVTLEMEFNKNPTPTAAVRERIAEEINMTERSVQIWFQNRRAKIKMI 126
Query: 71 S 71
+
Sbjct: 127 A 127
>gi|297281432|ref|XP_002802097.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 3
[Macaca mulatta]
Length = 703
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 343 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 393
Query: 67 EKRL 70
EKR+
Sbjct: 394 EKRI 397
>gi|149707840|ref|XP_001493063.1| PREDICTED: POU domain, class 2, transcription factor 1-like isoform
1 [Equus caballus]
Length = 756
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 397 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 447
Query: 67 EKRL 70
EKR+
Sbjct: 448 EKRI 451
>gi|35127|emb|CAA31767.1| unnamed protein product [Homo sapiens]
Length = 743
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 383 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 433
Query: 67 EKRL 70
EKR+
Sbjct: 434 EKRI 437
>gi|426217077|ref|XP_004002780.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 2
[Ovis aries]
Length = 682
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 322 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 372
Query: 67 EKRL 70
EKR+
Sbjct: 373 EKRI 376
>gi|397508398|ref|XP_003824643.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Pan paniscus]
Length = 766
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 406 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 456
Query: 67 EKRL 70
EKR+
Sbjct: 457 EKRI 460
>gi|297281434|ref|XP_002802098.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 4
[Macaca mulatta]
Length = 743
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 383 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 433
Query: 67 EKRL 70
EKR+
Sbjct: 434 EKRI 437
>gi|311771667|ref|NP_001185712.1| POU domain, class 2, transcription factor 1 isoform 2 [Homo
sapiens]
gi|297662810|ref|XP_002809882.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Pongo abelii]
gi|332219435|ref|XP_003258861.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Nomascus leucogenys]
Length = 755
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 395 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 445
Query: 67 EKRL 70
EKR+
Sbjct: 446 EKRI 449
>gi|119174178|ref|XP_001239450.1| hypothetical protein CIMG_09071 [Coccidioides immitis RS]
gi|392869638|gb|EAS28153.2| homeobox domain-containing protein [Coccidioides immitis RS]
Length = 614
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE +N++ PT ++ ++AE+I +TE+ V WF +RR K K +
Sbjct: 66 QKNHKRQRATQDQLVTLEMEFNKNPTPTAAVRERIAEEINMTERSVQIWFQNRRAKIKMI 125
Query: 71 S 71
+
Sbjct: 126 A 126
>gi|441634885|ref|XP_004089873.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 2
[Nomascus leucogenys]
gi|28202257|sp|P14859.2|PO2F1_HUMAN RecName: Full=POU domain, class 2, transcription factor 1; AltName:
Full=NF-A1; AltName: Full=Octamer-binding protein 1;
Short=Oct-1; AltName: Full=Octamer-binding transcription
factor 1; Short=OTF-1
gi|12804507|gb|AAH01664.1| POU2F1 protein [Homo sapiens]
gi|13097741|gb|AAH03571.1| POU2F1 protein [Homo sapiens]
gi|30354477|gb|AAH52274.1| POU class 2 homeobox 1 [Homo sapiens]
gi|119611192|gb|EAW90786.1| POU domain, class 2, transcription factor 1, isoform CRA_a [Homo
sapiens]
gi|119611193|gb|EAW90787.1| POU domain, class 2, transcription factor 1, isoform CRA_a [Homo
sapiens]
Length = 743
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 383 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 433
Query: 67 EKRL 70
EKR+
Sbjct: 434 EKRI 437
>gi|403272579|ref|XP_003928132.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Saimiri boliviensis boliviensis]
Length = 766
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 406 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 456
Query: 67 EKRL 70
EKR+
Sbjct: 457 EKRI 460
>gi|397508404|ref|XP_003824646.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 4
[Pan paniscus]
Length = 703
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 343 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 393
Query: 67 EKRL 70
EKR+
Sbjct: 394 EKRI 397
>gi|311771673|ref|NP_001185715.1| POU domain, class 2, transcription factor 1 isoform 3 [Homo
sapiens]
gi|194381844|dbj|BAG64291.1| unnamed protein product [Homo sapiens]
Length = 703
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 343 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 393
Query: 67 EKRL 70
EKR+
Sbjct: 394 EKRI 397
>gi|311771665|ref|NP_002688.3| POU domain, class 2, transcription factor 1 isoform 1 [Homo
sapiens]
gi|119611194|gb|EAW90788.1| POU domain, class 2, transcription factor 1, isoform CRA_b [Homo
sapiens]
Length = 766
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 406 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 456
Query: 67 EKRL 70
EKR+
Sbjct: 457 EKRI 460
>gi|444726715|gb|ELW67236.1| POU domain, class 2, transcription factor 1, partial [Tupaia
chinensis]
Length = 739
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 291 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 341
Query: 67 EKRL 70
EKR+
Sbjct: 342 EKRI 345
>gi|426217075|ref|XP_004002779.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Ovis aries]
Length = 750
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 390 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 440
Query: 67 EKRL 70
EKR+
Sbjct: 441 EKRI 444
>gi|30584627|gb|AAP36566.1| Homo sapiens POU domain, class 2, transcription factor 1 [synthetic
construct]
gi|61373021|gb|AAX43959.1| POU domain class 2 transcription factor 1 [synthetic construct]
Length = 744
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 383 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 433
Query: 67 EKRL 70
EKR+
Sbjct: 434 EKRI 437
>gi|73960725|ref|XP_862886.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 9
[Canis lupus familiaris]
gi|345803294|ref|XP_003435041.1| PREDICTED: POU domain, class 2, transcription factor 1 [Canis lupus
familiaris]
Length = 744
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 385 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQK 435
Query: 67 EKRL 70
EKR+
Sbjct: 436 EKRI 439
>gi|73960709|ref|XP_862700.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 3
[Canis lupus familiaris]
Length = 756
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 397 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQK 447
Query: 67 EKRL 70
EKR+
Sbjct: 448 EKRI 451
>gi|403272581|ref|XP_003928133.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 2
[Saimiri boliviensis boliviensis]
Length = 755
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 395 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 445
Query: 67 EKRL 70
EKR+
Sbjct: 446 EKRI 449
>gi|397508402|ref|XP_003824645.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 3
[Pan paniscus]
Length = 743
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 383 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 433
Query: 67 EKRL 70
EKR+
Sbjct: 434 EKRI 437
>gi|145553992|ref|NP_001016337.2| POU domain, class 2, transcription factor 1 [Xenopus (Silurana)
tropicalis]
gi|123907299|sp|Q28BL7.1|PO2F1_XENTR RecName: Full=POU domain, class 2, transcription factor 1; AltName:
Full=Octamer-binding protein 1; Short=Oct-1; AltName:
Full=Octamer-binding transcription factor 1; Short=OTF-1
gi|89273391|emb|CAJ82126.1| pou domain class 2 transcription factor 1 [Xenopus (Silurana)
tropicalis]
Length = 757
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 399 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 449
Query: 67 EKRL 70
EKR+
Sbjct: 450 EKRI 453
>gi|47523594|ref|NP_999429.1| POU domain, class 2, transcription factor 1 [Sus scrofa]
gi|8134598|sp|Q29076.1|PO2F1_PIG RecName: Full=POU domain, class 2, transcription factor 1; AltName:
Full=NF-A1; AltName: Full=Octamer-binding protein 1;
Short=Oct-1; AltName: Full=Octamer-binding transcription
factor 1; Short=OTF-1
gi|703243|gb|AAA93523.1| octamer binding protein 1 [Sus scrofa]
Length = 745
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 385 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 435
Query: 67 EKRL 70
EKR+
Sbjct: 436 EKRI 439
>gi|345803297|ref|XP_003435042.1| PREDICTED: POU domain, class 2, transcription factor 1 [Canis lupus
familiaris]
Length = 704
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 345 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQK 395
Query: 67 EKRL 70
EKR+
Sbjct: 396 EKRI 399
>gi|343959928|dbj|BAK63821.1| POU domain, class 2, transcription factor 1 [Pan troglodytes]
Length = 743
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 383 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 433
Query: 67 EKRL 70
EKR+
Sbjct: 434 EKRI 437
>gi|410931902|ref|XP_003979334.1| PREDICTED: homeobox protein Nkx-6.1-like [Takifugu rubripes]
Length = 319
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+N V L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 182 QNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 241
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 242 QNRRTKWRKKHAAEMATAKKKQD 264
>gi|297281428|ref|XP_002802096.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 2
[Macaca mulatta]
Length = 769
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 409 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 459
Query: 67 EKRL 70
EKR+
Sbjct: 460 EKRI 463
>gi|403272583|ref|XP_003928134.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 3
[Saimiri boliviensis boliviensis]
Length = 743
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 383 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 433
Query: 67 EKRL 70
EKR+
Sbjct: 434 EKRI 437
>gi|296229894|ref|XP_002760470.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 2
[Callithrix jacchus]
Length = 755
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 395 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 445
Query: 67 EKRL 70
EKR+
Sbjct: 446 EKRI 449
>gi|355560592|gb|EHH17278.1| hypothetical protein EGK_13644, partial [Macaca mulatta]
Length = 527
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 167 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 217
Query: 67 EKRL 70
EKR+
Sbjct: 218 EKRI 221
>gi|332811149|ref|XP_001157105.2| PREDICTED: POU domain, class 2, transcription factor 1 [Pan
troglodytes]
Length = 755
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 395 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 445
Query: 67 EKRL 70
EKR+
Sbjct: 446 EKRI 449
>gi|296229896|ref|XP_002760471.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 3
[Callithrix jacchus]
gi|390477169|ref|XP_002760473.2| PREDICTED: POU domain, class 2, transcription factor 1 isoform 5
[Callithrix jacchus]
Length = 743
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 383 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 433
Query: 67 EKRL 70
EKR+
Sbjct: 434 EKRI 437
>gi|149058152|gb|EDM09309.1| POU domain, class 2, transcription factor 1, isoform CRA_e [Rattus
norvegicus]
Length = 546
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 397 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 447
Query: 67 EKRL 70
EKR+
Sbjct: 448 EKRI 451
>gi|403272585|ref|XP_003928135.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 4
[Saimiri boliviensis boliviensis]
Length = 703
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 343 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 393
Query: 67 EKRL 70
EKR+
Sbjct: 394 EKRI 397
>gi|296229892|ref|XP_002760469.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Callithrix jacchus]
Length = 703
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 343 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 393
Query: 67 EKRL 70
EKR+
Sbjct: 394 EKRI 397
>gi|338724512|ref|XP_003364957.1| PREDICTED: POU domain, class 2, transcription factor 1-like [Equus
caballus]
Length = 704
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 345 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 395
Query: 67 EKRL 70
EKR+
Sbjct: 396 EKRI 399
>gi|334321742|ref|XP_003340155.1| PREDICTED: POU domain, class 2, transcription factor 1-like
[Monodelphis domestica]
Length = 728
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 368 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 418
Query: 67 EKRL 70
EKR+
Sbjct: 419 EKRI 422
>gi|149707842|ref|XP_001493088.1| PREDICTED: POU domain, class 2, transcription factor 1-like isoform
2 [Equus caballus]
gi|338724510|ref|XP_003364956.1| PREDICTED: POU domain, class 2, transcription factor 1-like [Equus
caballus]
Length = 744
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 385 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 435
Query: 67 EKRL 70
EKR+
Sbjct: 436 EKRI 439
>gi|149058147|gb|EDM09304.1| POU domain, class 2, transcription factor 1, isoform CRA_a [Rattus
norvegicus]
gi|149058148|gb|EDM09305.1| POU domain, class 2, transcription factor 1, isoform CRA_a [Rattus
norvegicus]
Length = 557
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 408 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 458
Query: 67 EKRL 70
EKR+
Sbjct: 459 EKRI 462
>gi|281348538|gb|EFB24122.1| hypothetical protein PANDA_017190 [Ailuropoda melanoleuca]
Length = 725
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 366 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQK 416
Query: 67 EKRL 70
EKR+
Sbjct: 417 EKRI 420
>gi|431916063|gb|ELK16317.1| POU domain, class 2, transcription factor 1 [Pteropus alecto]
Length = 972
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 505 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQK 555
Query: 67 EKRL 70
EKR+
Sbjct: 556 EKRI 559
>gi|395530740|ref|XP_003767446.1| PREDICTED: POU domain, class 2, transcription factor 1 [Sarcophilus
harrisii]
Length = 645
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 288 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLKMEKEVIRVWFCNRRQK 338
Query: 67 EKRL 70
EKR+
Sbjct: 339 EKRI 342
>gi|344287047|ref|XP_003415267.1| PREDICTED: POU domain, class 2, transcription factor 1-like isoform
1 [Loxodonta africana]
Length = 757
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 397 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 447
Query: 67 EKRL 70
EKR+
Sbjct: 448 EKRI 451
>gi|37729474|gb|AAO45298.1| transcription factor OCT-1Z [Mus musculus]
Length = 522
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR K
Sbjct: 386 RTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQK 436
Query: 67 EKRL 70
EKR+
Sbjct: 437 EKRI 440
>gi|258569989|ref|XP_002543798.1| RfeB protein [Uncinocarpus reesii 1704]
gi|237904068|gb|EEP78469.1| RfeB protein [Uncinocarpus reesii 1704]
Length = 535
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE +N++ PT ++ ++AE+I +TE+ V WF +RR K K +
Sbjct: 37 QKNHKRQRATQDQLVTLEMEFNKNPTPTAAVRERIAEEINMTERSVQIWFQNRRAKIKMI 96
Query: 71 S 71
+
Sbjct: 97 A 97
>gi|296489913|tpg|DAA32026.1| TPA: POU class 2 homeobox 1 [Bos taurus]
Length = 731
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 397 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 447
Query: 67 EKRL 70
EKR+
Sbjct: 448 EKRI 451
>gi|313220739|emb|CBY31581.1| unnamed protein product [Oikopleura dioica]
Length = 416
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KRR T Q+ LE + ++ T E + +++ ++ LT++QV WF +RR+KEKRL
Sbjct: 247 KRRPYTKLQIQELETEFRRTEFVTREQRQEISRRLNLTDRQVKIWFQNRRMKEKRL 302
>gi|115497644|ref|NP_001069050.1| POU domain, class 2, transcription factor 1 [Bos taurus]
gi|111305157|gb|AAI20289.1| POU class 2 homeobox 1 [Bos taurus]
Length = 730
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 397 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 447
Query: 67 EKRL 70
EKR+
Sbjct: 448 EKRI 451
>gi|326913132|ref|XP_003202895.1| PREDICTED: POU domain, class 2, transcription factor 1-like
[Meleagris gallopavo]
Length = 751
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 391 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 441
Query: 67 EKRL 70
EKR+
Sbjct: 442 EKRI 445
>gi|344287049|ref|XP_003415268.1| PREDICTED: POU domain, class 2, transcription factor 1-like isoform
2 [Loxodonta africana]
Length = 682
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 322 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 372
Query: 67 EKRL 70
EKR+
Sbjct: 373 EKRI 376
>gi|45382673|ref|NP_990803.1| POU domain, class 2, transcription factor 1 [Gallus gallus]
gi|123398|sp|P15143.1|PO2F1_CHICK RecName: Full=POU domain, class 2, transcription factor 1; AltName:
Full=NF-A1; AltName: Full=Octamer-binding protein 1;
Short=Oct-1; AltName: Full=Octamer-binding transcription
factor 1; Short=OTF-1
gi|212467|gb|AAA48993.1| octamer-binding protein [Gallus gallus]
Length = 739
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 379 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 429
Query: 67 EKRL 70
EKR+
Sbjct: 430 EKRI 433
>gi|297281438|ref|XP_002802100.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 6
[Macaca mulatta]
Length = 741
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 381 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 431
Query: 67 EKRL 70
EKR+
Sbjct: 432 EKRI 435
>gi|156119517|ref|NP_001095255.1| POU domain, class 2, transcription factor 1 [Xenopus laevis]
gi|281185499|sp|P16143.3|PO2F1_XENLA RecName: Full=POU domain, class 2, transcription factor 1; AltName:
Full=Octamer-binding protein 1; Short=Oct-1;
Short=XOct1; AltName: Full=Octamer-binding transcription
factor 1; Short=OTF-1; AltName: Full=Xloct1-32
gi|64952|emb|CAA40454.1| maternal transcription factor [Xenopus laevis]
Length = 758
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 399 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 449
Query: 67 EKRL 70
EKR+
Sbjct: 450 EKRI 453
>gi|208965378|dbj|BAG72703.1| POU class 2 homeobox 1 [synthetic construct]
Length = 741
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 381 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 431
Query: 67 EKRL 70
EKR+
Sbjct: 432 EKRI 435
>gi|405122863|gb|AFR97629.1| LIM-homeobox protein [Cryptococcus neoformans var. grubii H99]
Length = 813
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
RR TP Q+ LE +Y+ + P +++ Q+A Q+G+T++ V WF +RR K K L
Sbjct: 162 RRRTTPEQLKVLEFWYDINPKPDNQLREQLAAQLGMTKRNVQVWFQNRRAKMKGL 216
>gi|358055044|dbj|GAA98813.1| hypothetical protein E5Q_05501 [Mixia osmundae IAM 14324]
Length = 425
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
R TP Q L + ++PT + +VAE++G+T ++V WF +RR EKRL
Sbjct: 196 RTLTTPQQTAVLNALLEQTRFPTTATRERVAEELGMTPRRVQIWFQNRRQNEKRL 250
>gi|66809961|ref|XP_638704.1| hypothetical protein DDB_G0284293 [Dictyostelium discoideum AX4]
gi|74996893|sp|Q54PU1.1|HBX10_DICDI RecName: Full=Homeobox protein 10; Short=DdHbx-10
gi|60467302|gb|EAL65335.1| hypothetical protein DDB_G0284293 [Dictyostelium discoideum AX4]
Length = 638
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 37/55 (67%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ +P Q+ LE+ + K P+++++ ++A Q+G++ ++V WF ++R K KR
Sbjct: 304 KRQRTSPEQLAILEQIFETDKMPSQQIRVRLANQLGMSSRRVQIWFQNKRAKVKR 358
>gi|671665|emb|CAA35051.1| Oct-1 transcription factor [Xenopus laevis]
Length = 760
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 401 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 451
Query: 67 EKRL 70
EKR+
Sbjct: 452 EKRI 455
>gi|426332607|ref|XP_004027892.1| PREDICTED: POU domain, class 2, transcription factor 1 [Gorilla
gorilla gorilla]
Length = 624
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 409 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 459
Query: 67 EKRL 70
EKR+
Sbjct: 460 EKRI 463
>gi|193787155|dbj|BAG52361.1| unnamed protein product [Homo sapiens]
Length = 741
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 381 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 431
Query: 67 EKRL 70
EKR+
Sbjct: 432 EKRI 435
>gi|334186462|ref|NP_193011.5| Homeodomain-like transcriptional regulator [Arabidopsis thaliana]
gi|332657775|gb|AEE83175.1| Homeodomain-like transcriptional regulator [Arabidopsis thaliana]
Length = 1131
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 19 KTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
K+P QV ALE FY E YPT + + + +GLT K+V GWF RR + K
Sbjct: 4 KSPLQVQALEGFYLEQMYPTPKEMEDLGKSLGLTLKEVRGWFKRRRSRGK 53
>gi|296229898|ref|XP_002760472.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 4
[Callithrix jacchus]
Length = 741
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 381 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 431
Query: 67 EKRL 70
EKR+
Sbjct: 432 EKRI 435
>gi|14588545|dbj|BAB61733.1| transcription factor ems/emx [Halocynthia roretzi]
Length = 591
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K I+ + TPAQ++ LE ++++ Y + Q+A + LTE QV WF +RR K KR
Sbjct: 417 KRIRTAF-TPAQLLRLEHEFDKNHYVVGAERKQLASSLKLTETQVKVWFQNRRTKYKRQK 475
Query: 72 VDEAFVGGRQD 82
++E G +Q+
Sbjct: 476 IEEKAAGRKQN 486
>gi|402858090|ref|XP_003893559.1| PREDICTED: POU domain, class 2, transcription factor 1, partial
[Papio anubis]
Length = 669
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 309 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 359
Query: 67 EKRL 70
EKR+
Sbjct: 360 EKRI 363
>gi|198474117|ref|XP_001356560.2| GA19468 [Drosophila pseudoobscura pseudoobscura]
gi|198138256|gb|EAL33624.2| GA19468 [Drosophila pseudoobscura pseudoobscura]
Length = 620
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 26 ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL--SVDEAFVGGRQDR 83
ALEK + ++ PT E SQ+A+++G+ ++ V WFC+RR KEKR+ S+D G D
Sbjct: 555 ALEKAFMANQKPTSEEISQLADRLGMEKEVVRVWFCNRRQKEKRINPSLDSP-TGADDDE 613
Query: 84 SS 85
SS
Sbjct: 614 SS 615
>gi|194761346|ref|XP_001962890.1| GF14200 [Drosophila ananassae]
gi|190616587|gb|EDV32111.1| GF14200 [Drosophila ananassae]
Length = 622
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 26 ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
ALEK + ++ PT E SQ+A+++G+ ++ V WFC+RR KEKR+
Sbjct: 558 ALEKAFMANQKPTSEEISQLADRLGMEKEVVRVWFCNRRQKEKRI 602
>gi|195147630|ref|XP_002014782.1| GL19353 [Drosophila persimilis]
gi|194106735|gb|EDW28778.1| GL19353 [Drosophila persimilis]
Length = 619
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 26 ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL--SVDEAFVGGRQDR 83
ALEK + ++ PT E SQ+A+++G+ ++ V WFC+RR KEKR+ S+D G D
Sbjct: 554 ALEKAFMANQKPTSEEISQLADRLGMEKEVVRVWFCNRRQKEKRINPSLDSP-TGADDDE 612
Query: 84 SS 85
SS
Sbjct: 613 SS 614
>gi|281204744|gb|EFA78939.1| putative homeobox transcription factor [Polysphondylium pallidum
PN500]
Length = 502
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 37/55 (67%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ +P Q+ LE+ + K P+++++ ++A Q+G++ ++V WF ++R K KR
Sbjct: 187 KRQRTSPEQLAILEQIFETDKMPSQQIRIRLANQLGMSSRRVQIWFQNKRAKVKR 241
>gi|39644712|gb|AAH07388.1| POU2F1 protein [Homo sapiens]
Length = 561
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 291 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 341
Query: 67 EKRL 70
EKR+
Sbjct: 342 EKRI 345
>gi|402217195|gb|EJT97276.1| hypothetical protein DACRYDRAFT_25093 [Dacryopinax sp. DJM-731 SS1]
Length = 569
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
E +R TP Q AL + YN +P+ + + Q+AE++G+ +QV WF +RR ++K
Sbjct: 329 ELRARRHRTTPRQFQALTQVYNRTAFPSTQERLQLAERLGMQPRQVQIWFQNRRQQDK 386
>gi|327268734|ref|XP_003219151.1| PREDICTED: POU domain, class 2, transcription factor 1-like [Anolis
carolinensis]
Length = 863
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 505 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 555
Query: 67 EKRL 70
EKR+
Sbjct: 556 EKRI 559
>gi|115492331|ref|XP_001210793.1| hypothetical protein ATEG_00707 [Aspergillus terreus NIH2624]
gi|114197653|gb|EAU39353.1| hypothetical protein ATEG_00707 [Aspergillus terreus NIH2624]
Length = 603
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 4 EENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+ N +KN KR+ T Q++ LE +N++ PT + ++A++I +TE+ V WF +R
Sbjct: 51 KSNLTQQQKNNKRQRATQDQLVTLEMEFNKNPTPTAATRERIAQEINMTERSVQIWFQNR 110
Query: 64 RLKEKRLS 71
R K K L+
Sbjct: 111 RAKIKMLA 118
>gi|195114774|ref|XP_002001942.1| GI14486 [Drosophila mojavensis]
gi|193912517|gb|EDW11384.1| GI14486 [Drosophila mojavensis]
Length = 589
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 26 ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL--SVDEAFVGGRQDR 83
ALEK + ++ PT E SQ+A+++G+ ++ V WFC+RR KEKR+ S+D G D
Sbjct: 525 ALEKAFMANQKPTSEEISQLADRLGMEKEVVRVWFCNRRQKEKRINPSLDSP-TGADDDE 583
Query: 84 SSGVI 88
SS ++
Sbjct: 584 SSYML 588
>gi|432901721|ref|XP_004076914.1| PREDICTED: homeobox protein vent1-like [Oryzias latipes]
Length = 244
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 2 HSEENKVSLEKNIK-RRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVS 57
HS E++ ++K+ RR +T P Q++ LEK +++HKY + + A+++ L+E QV
Sbjct: 108 HSVEDRSGVDKDAPPRRVRTKFTPKQILKLEKVFSKHKYLDAGERVKTAQKLNLSETQVR 167
Query: 58 GWFCHRRLKEKR 69
WF +RR+K KR
Sbjct: 168 TWFQNRRMKLKR 179
>gi|324517390|gb|ADY46808.1| Homeobox protein ceh-13 [Ascaris suum]
Length = 184
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+V E N+ R + Q+ LEK Y KY ++++A + L E QV WF +RR+K
Sbjct: 84 RVVTESNVNRTNFSTHQLTELEKEYYTSKYLNRTRRAEIASILQLNETQVKIWFQNRRMK 143
Query: 67 EKRLSVDEAFVGGR 80
EK+ ++AF+ R
Sbjct: 144 EKKRQKEQAFLARR 157
>gi|341900549|gb|EGT56484.1| CBN-LIN-39 protein [Caenorhabditis brenneri]
Length = 252
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+HS EK + Y T QV+ LEK ++ HKY T + + +VA + LTE+QV WF
Sbjct: 154 VHSTTGGSRGEKRQRTAY-TRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWF 212
Query: 61 CHRRLKEKRLSVDE 74
+RR+K K+ + D+
Sbjct: 213 QNRRMKHKKENKDK 226
>gi|195401230|ref|XP_002059217.1| GJ16273 [Drosophila virilis]
gi|194156091|gb|EDW71275.1| GJ16273 [Drosophila virilis]
Length = 597
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 26 ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
ALEK + ++ PT E SQ+A+++G+ ++ V WFC+RR KEKR+
Sbjct: 533 ALEKAFMANQKPTSEEISQLADRLGMEKEVVRVWFCNRRQKEKRI 577
>gi|71981493|ref|NP_001021164.1| Protein LIN-39 [Caenorhabditis elegans]
gi|462537|sp|P34684.1|LIN39_CAEEL RecName: Full=Homeobox protein lin-39; AltName: Full=Abnormal cell
lineage protein 39
gi|304328|gb|AAB04137.1| homeobox protein [Caenorhabditis elegans]
gi|304332|gb|AAC37168.1| homeobox protein [Caenorhabditis elegans]
gi|351021329|emb|CCD63594.1| Protein LIN-39 [Caenorhabditis elegans]
Length = 253
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+HS EK + Y T QV+ LEK ++ HKY T + + +VA + LTE+QV WF
Sbjct: 155 VHSTTGGSRGEKRQRTAY-TRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWF 213
Query: 61 CHRRLKEKRLSVDE 74
+RR+K K+ + D+
Sbjct: 214 QNRRMKHKKENKDK 227
>gi|440895547|gb|ELR47702.1| POU domain, class 2, transcription factor 1, partial [Bos grunniens
mutus]
Length = 504
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 391 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 441
Query: 67 EKRL 70
EKR+
Sbjct: 442 EKRI 445
>gi|209489261|gb|ACI49040.1| hypothetical protein Cbre_JD07.007 [Caenorhabditis brenneri]
Length = 252
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+HS EK + Y T QV+ LEK ++ HKY T + + +VA + LTE+QV WF
Sbjct: 154 VHSTTGGSRGEKRQRTAY-TRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWF 212
Query: 61 CHRRLKEKRLSVDE 74
+RR+K K+ + D+
Sbjct: 213 QNRRMKHKKENKDK 226
>gi|222824842|emb|CAM12240.2| vox protein [Danio rerio]
Length = 143
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+ I+ ++ TP Q+ LEK +N+HKY + + A ++GL+E Q+ WF +RR+K KR
Sbjct: 73 RRIRTKF-TPEQIDKLEKIFNKHKYLDAGERVKTALKLGLSETQIRTWFQNRRMKLKR 129
>gi|449301895|gb|EMC97904.1| hypothetical protein BAUCODRAFT_46155, partial [Baudoinia
compniacensis UAMH 10762]
Length = 542
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q+M LE +N++ PT ++ ++A+ I +TE+ V WF +RR K K +
Sbjct: 21 QKNAKRQRATQDQLMTLEIEFNKNPTPTAVVRERIAQDIDMTERSVQIWFQNRRAKIKNI 80
Query: 71 S 71
+
Sbjct: 81 A 81
>gi|242011846|ref|XP_002426655.1| proboscipedia, putative [Pediculus humanus corporis]
gi|212510819|gb|EEB13917.1| proboscipedia, putative [Pediculus humanus corporis]
Length = 535
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 17/119 (14%)
Query: 4 EENKVSLEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
EENK + + + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF
Sbjct: 5 EENKKN-QNGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWF 63
Query: 61 CHRRLKEKRLS----------VDEAFVGGRQDRS---SGVIQDRGSGLRQDSCGSTKQG 106
+RR+K KR S + ++ GG+ +S S ++QD S +C T G
Sbjct: 64 QNRRMKHKRQSLSKQGEDGEEIKDSPTGGKGSKSDDKSLLLQDENSKKSCQNCDLTPTG 122
>gi|320037287|gb|EFW19224.1| hypothetical protein CPSG_03608 [Coccidioides posadasii str.
Silveira]
Length = 548
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE +N++ PT ++ ++AE+I +TE+ V WF +RR K K +
Sbjct: 67 QKNHKRQRATQDQLVTLEMEFNKNPTPTAAVRERIAEEINMTERSVQIWFQNRRAKIKMI 126
Query: 71 S 71
+
Sbjct: 127 A 127
>gi|393241485|gb|EJD49007.1| homeobox-domain-containing protein, partial [Auricularia delicata
TFB-10046 SS5]
Length = 205
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR TP Q++ LE+ + + + PT + +++E +G+ E+Q WF +RR K K L
Sbjct: 69 KRSRVTPDQLLHLERIFAQDRSPTAARRKEISEMLGMQERQTQIWFQNRRAKAKNL 124
>gi|172087376|ref|XP_001913230.1| HOX12 [Oikopleura dioica]
gi|42601357|gb|AAS21383.1| HOX12 [Oikopleura dioica]
Length = 509
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KRR T Q+ LE + ++ T E + +++ ++ LT++QV WF +RR+KEKRL
Sbjct: 247 KRRPYTKLQIQELETEFRRTEFVTREQRQEISRRLNLTDRQVKIWFQNRRMKEKRL 302
>gi|268575256|ref|XP_002642607.1| C. briggsae CBR-LIN-39 protein [Caenorhabditis briggsae]
gi|9837164|gb|AAG00456.1|AF277988_1 LIN-39 [Caenorhabditis briggsae]
Length = 253
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+HS EK + Y T QV+ LEK ++ HKY T + + +VA + LTE+QV WF
Sbjct: 155 VHSTTGGSRGEKRQRTAY-TRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWF 213
Query: 61 CHRRLKEKRLSVDE 74
+RR+K K+ + D+
Sbjct: 214 QNRRMKHKKENKDK 227
>gi|119500470|ref|XP_001266992.1| Homeobox domain protein [Neosartorya fischeri NRRL 181]
gi|119415157|gb|EAW25095.1| Homeobox domain protein [Neosartorya fischeri NRRL 181]
Length = 603
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE +N++ PT + ++A++I +TE+ V WF +RR K K L
Sbjct: 60 QKNNKRQRATQDQLVTLELEFNKNPTPTAATRERIAQEINMTERSVQIWFQNRRAKIKML 119
Query: 71 S 71
+
Sbjct: 120 A 120
>gi|6002919|gb|AAF00199.1|AF162278_1 Skn-1a/Epoc-1/Oct-11 POU transcription factor [Homo sapiens]
Length = 436
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 285 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 335
Query: 67 EKRLSVDEAFVGGRQDRSSGVIQDRGS 93
EKR++ A D +S ++ GS
Sbjct: 336 EKRINCPVATPIKPPDYNSRLVSPSGS 362
>gi|313226651|emb|CBY21796.1| unnamed protein product [Oikopleura dioica]
Length = 509
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KRR T Q+ LE + ++ T E + +++ ++ LT++QV WF +RR+KEKRL
Sbjct: 247 KRRPYTKLQIQELETEFRRTEFVTREQRQEISRRLNLTDRQVKIWFQNRRMKEKRL 302
>gi|209489417|gb|ACI49179.1| hypothetical protein Csp3_JD02.007 [Caenorhabditis angaria]
Length = 210
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
QV+ LEK ++ HKY T + + +VA + LTE+QV WF +RR+K K+ + D+
Sbjct: 133 QVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKENKDK 184
>gi|326472434|gb|EGD96443.1| homeobox domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 669
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE + ++ PT ++ Q+AE I +TE+ V WF +RR K K +
Sbjct: 106 QKNHKRQRATQDQLVTLEMEFKKNPTPTAAVREQIAEDINMTERSVQIWFQNRRAKIKMI 165
Query: 71 S 71
+
Sbjct: 166 A 166
>gi|355712850|gb|AES04489.1| POU class 2 homeobox 1 [Mustela putorius furo]
Length = 291
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 178 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQK 228
Query: 67 EKRL 70
EKR+
Sbjct: 229 EKRI 232
>gi|159125279|gb|EDP50396.1| homeobox transcription factor (RfeB), putative [Aspergillus
fumigatus A1163]
Length = 603
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE +N++ PT + ++A++I +TE+ V WF +RR K K L
Sbjct: 60 QKNNKRQRATQDQLVTLELEFNKNPTPTAATRERIAQEINMTERSVQIWFQNRRAKIKML 119
Query: 71 S 71
+
Sbjct: 120 A 120
>gi|327297400|ref|XP_003233394.1| homeobox domain-containing protein [Trichophyton rubrum CBS 118892]
gi|326464700|gb|EGD90153.1| homeobox domain-containing protein [Trichophyton rubrum CBS 118892]
Length = 668
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE + ++ PT ++ Q+AE I +TE+ V WF +RR K K +
Sbjct: 105 QKNHKRQRATQDQLVTLEMEFKKNPTPTAAVREQIAEDINMTERSVQIWFQNRRAKIKMI 164
Query: 71 S 71
+
Sbjct: 165 A 165
>gi|121707646|ref|XP_001271898.1| Homeobox domain protein [Aspergillus clavatus NRRL 1]
gi|119400046|gb|EAW10472.1| Homeobox domain protein [Aspergillus clavatus NRRL 1]
Length = 606
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE +N++ PT + ++A++I +TE+ V WF +RR K K L
Sbjct: 62 QKNNKRQRATQDQLVTLEVEFNKNPTPTAATRERIAQEINMTERSVQIWFQNRRAKIKML 121
Query: 71 S 71
+
Sbjct: 122 A 122
>gi|145258409|ref|XP_001402033.1| homeobox transcription factor (RfeB) [Aspergillus niger CBS 513.88]
gi|134074639|emb|CAK44672.1| unnamed protein product [Aspergillus niger]
Length = 604
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE +N++ PT + ++A++I +TE+ V WF +RR K K L
Sbjct: 61 QKNNKRQRATQDQLVTLELEFNKNPTPTAATRERIAQEINMTERSVQIWFQNRRAKIKML 120
Query: 71 S 71
+
Sbjct: 121 A 121
>gi|169771627|ref|XP_001820283.1| homeobox transcription factor (RfeB) [Aspergillus oryzae RIB40]
gi|83768142|dbj|BAE58281.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871761|gb|EIT80918.1| homeobox transcription factor [Aspergillus oryzae 3.042]
Length = 605
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE +N++ PT + ++A++I +TE+ V WF +RR K K L
Sbjct: 59 QKNNKRQRATQDQLVTLELEFNKNPTPTAATRERIAQEINMTERSVQIWFQNRRAKIKML 118
Query: 71 S 71
+
Sbjct: 119 A 119
>gi|238485794|ref|XP_002374135.1| homeobox transcription factor (RfeB), putative [Aspergillus flavus
NRRL3357]
gi|220699014|gb|EED55353.1| homeobox transcription factor (RfeB), putative [Aspergillus flavus
NRRL3357]
Length = 604
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE +N++ PT + ++A++I +TE+ V WF +RR K K L
Sbjct: 58 QKNNKRQRATQDQLVTLELEFNKNPTPTAATRERIAQEINMTERSVQIWFQNRRAKIKML 117
Query: 71 S 71
+
Sbjct: 118 A 118
>gi|146323811|ref|XP_751804.2| homeobox transcription factor (RfeB) [Aspergillus fumigatus Af293]
gi|129557524|gb|EAL89766.2| homeobox transcription factor (RfeB), putative [Aspergillus
fumigatus Af293]
Length = 603
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE +N++ PT + ++A++I +TE+ V WF +RR K K L
Sbjct: 60 QKNNKRQRATQDQLVTLELEFNKNPTPTAATRERIAQEINMTERSVQIWFQNRRAKIKML 119
Query: 71 S 71
+
Sbjct: 120 A 120
>gi|315044651|ref|XP_003171701.1| homeobox domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311344044|gb|EFR03247.1| homeobox domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 654
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE + ++ PT ++ Q+AE I +TE+ V WF +RR K K +
Sbjct: 84 QKNHKRQRATQDQLVTLEMEFKKNPTPTAAVREQIAEDINMTERSVQIWFQNRRAKIKMI 143
Query: 71 S 71
+
Sbjct: 144 A 144
>gi|326481657|gb|EGE05667.1| homeobox domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 669
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE + ++ PT ++ Q+AE I +TE+ V WF +RR K K +
Sbjct: 106 QKNHKRQRATQDQLVTLEMEFKKNPTPTAAVREQIAEDINMTERSVQIWFQNRRAKIKMI 165
Query: 71 S 71
+
Sbjct: 166 A 166
>gi|358370796|dbj|GAA87406.1| homeobox transcription factor [Aspergillus kawachii IFO 4308]
Length = 604
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE +N++ PT + ++A++I +TE+ V WF +RR K K L
Sbjct: 61 QKNNKRQRATQDQLVTLELEFNKNPTPTAATRERIAQEINMTERSVQIWFQNRRAKIKML 120
Query: 71 S 71
+
Sbjct: 121 A 121
>gi|302657246|ref|XP_003020349.1| hypothetical protein TRV_05560 [Trichophyton verrucosum HKI 0517]
gi|291184175|gb|EFE39731.1| hypothetical protein TRV_05560 [Trichophyton verrucosum HKI 0517]
Length = 667
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE + ++ PT ++ Q+AE I +TE+ V WF +RR K K +
Sbjct: 104 QKNHKRQRATQDQLVTLEMEFKKNPTPTAAVREQIAEDINMTERSVQIWFQNRRAKIKMI 163
Query: 71 S 71
+
Sbjct: 164 A 164
>gi|302510995|ref|XP_003017449.1| hypothetical protein ARB_04330 [Arthroderma benhamiae CBS 112371]
gi|291181020|gb|EFE36804.1| hypothetical protein ARB_04330 [Arthroderma benhamiae CBS 112371]
Length = 673
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE + ++ PT ++ Q+AE I +TE+ V WF +RR K K +
Sbjct: 110 QKNHKRQRATQDQLVTLEMEFKKNPTPTAAVREQIAEDINMTERSVQIWFQNRRAKIKMI 169
Query: 71 S 71
+
Sbjct: 170 A 170
>gi|440790115|gb|ELR11403.1| homeobox domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 396
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK--RLSV 72
KR+ KTP Q+ LEK + + P ++++ +++ +GLT +QV WF ++R K K R+SV
Sbjct: 237 KRKRKTPEQLALLEKEFETNPMPNKDVREHLSQNLGLTSRQVQIWFQNKRAKVKNNRVSV 296
Query: 73 DEAFVGGRQ 81
GG Q
Sbjct: 297 P----GGSQ 301
>gi|259487376|tpe|CBF86004.1| TPA: RfeB [Source:UniProtKB/TrEMBL;Acc:Q8J178] [Aspergillus
nidulans FGSC A4]
Length = 604
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE +N++ PT + ++A++I +TE+ V WF +RR K K L
Sbjct: 61 QKNNKRQRATQDQLVLLEMEFNKNPTPTAATRERIAQEINMTERSVQIWFQNRRAKIKML 120
Query: 71 S 71
+
Sbjct: 121 A 121
>gi|402216194|gb|AFQ35838.1| POU class 2 homeobox 3 transcript variant 3 [Ovis aries]
gi|402216196|gb|AFQ35839.1| POU class 2 homeobox 3 transcript variant 4 [Ovis aries]
Length = 221
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 70 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 120
Query: 67 EKRLSVDEAFVGGRQDRSSGVIQDRGS 93
EKR++ A SS ++ GS
Sbjct: 121 EKRINCPVATPIKSPMYSSRLVSPSGS 147
>gi|224471047|dbj|BAH23880.1| transcription factor Hox11/13b [Balanoglossus misakiensis]
Length = 83
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
+ KRR + Q+ LEK + ++ Y T E + + ++Q+ LTE+QV WF +RR+K K+L+
Sbjct: 1 RRTKRRPYSKMQIYELEKAFQQNAYLTRERRQKYSQQLNLTERQVKIWFQNRRMKSKKLT 60
>gi|395848433|ref|XP_003796855.1| PREDICTED: POU domain, class 2, transcription factor 3 [Otolemur
garnettii]
Length = 436
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 285 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 335
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 336 EKRINCSVA 344
>gi|432949468|ref|XP_004084225.1| PREDICTED: homeobox protein Nkx-6.1-like, partial [Oryzias latipes]
Length = 215
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+N V L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 74 QNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 133
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 134 QNRRTKWRKKHAAEMASAKKKQD 156
>gi|308474472|ref|XP_003099457.1| CRE-LIN-39 protein [Caenorhabditis remanei]
gi|308266646|gb|EFP10599.1| CRE-LIN-39 protein [Caenorhabditis remanei]
Length = 256
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+HS EK + Y T QV+ LEK ++ HKY T + + +VA + LTE+QV WF
Sbjct: 158 VHSTTGGSRGEKRQRTAY-TRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWF 216
Query: 61 CHRRLKEKRLSVDE 74
+RR+K K+ + D+
Sbjct: 217 QNRRMKHKKENKDK 230
>gi|449275800|gb|EMC84568.1| POU domain, class 2, transcription factor 1, partial [Columba
livia]
Length = 714
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT + + +A+Q+ + ++ + WFC+RR K
Sbjct: 383 RTSIETNIR---------VALEKSFLENQKPTSDEITMIADQLNMEKEVIRVWFCNRRQK 433
Query: 67 EKRL 70
EKR+
Sbjct: 434 EKRI 437
>gi|62205099|gb|AAH92695.1| Vox protein, partial [Danio rerio]
Length = 265
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+ I+ ++ TP Q+ LEK +N+HKY + + A ++GL+E Q+ WF +RR+K KR
Sbjct: 141 RRIRTKF-TPEQIDKLEKIFNKHKYLDAGERVKTALKLGLSETQIRTWFQNRRMKLKR 197
>gi|384494394|gb|EIE84885.1| hypothetical protein RO3G_09595 [Rhizopus delemar RA 99-880]
Length = 264
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 10 LEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
L + KR TP Q+ LEK +N + P ++ Q++ Q+G+TE+ + WF +RR K K
Sbjct: 64 LSRTRKRTRATPEQLAILEKSFNVNPSPNSRVREQLSLQLGMTERSIQIWFQNRRAKVK 122
>gi|194861123|ref|XP_001969720.1| GG23791 [Drosophila erecta]
gi|190661587|gb|EDV58779.1| GG23791 [Drosophila erecta]
Length = 604
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 33/45 (73%)
Query: 26 ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
ALEK + ++ PT E +Q+A+++G+ ++ V WFC+RR KEKR+
Sbjct: 540 ALEKAFLANQKPTSEEITQLADRLGMEKEVVRVWFCNRRQKEKRI 584
>gi|400593325|gb|EJP61289.1| homeobox domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 618
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q+ LE +N++ PT ++ ++A++I +TE+ V WF +RR K K L
Sbjct: 69 QKNHKRQRATQDQLATLEVEFNKNPTPTASVRDRIADEINMTERSVQIWFQNRRAKIKLL 128
Query: 71 S 71
+
Sbjct: 129 A 129
>gi|296809998|ref|XP_002845337.1| homeobox domain-containing protein [Arthroderma otae CBS 113480]
gi|238842725|gb|EEQ32387.1| homeobox domain-containing protein [Arthroderma otae CBS 113480]
Length = 560
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE + ++ PT ++ Q+AE I +TE+ V WF +RR K K +
Sbjct: 109 QKNHKRQRATQDQLVTLEMEFKKNPTPTAAVREQIAENINMTERSVQIWFQNRRAKIKMI 168
Query: 71 S 71
+
Sbjct: 169 A 169
>gi|195472405|ref|XP_002088491.1| GE18594 [Drosophila yakuba]
gi|194174592|gb|EDW88203.1| GE18594 [Drosophila yakuba]
Length = 603
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 26 ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL--SVDEAFVGGRQDR 83
ALEK + ++ PT E +Q+A+++G+ ++ V WFC+RR KEKR+ S+D G D
Sbjct: 539 ALEKAFLANQKPTSEEITQLADRLGMEKEVVRVWFCNRRQKEKRINPSLDSP-TGADDDE 597
Query: 84 SS 85
SS
Sbjct: 598 SS 599
>gi|390604589|gb|EIN13980.1| hypothetical protein PUNSTDRAFT_123737 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 651
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFC 61
H + ++ + KR A V LE F++EH YPT K+ +A++ G+T KQ+S W+
Sbjct: 140 HDPDGRLRRTRKNKRTTFNHAYVALLEHFFSEHPYPTTHDKTWLAQRTGMTTKQISVWYQ 199
Query: 62 HRR 64
+RR
Sbjct: 200 NRR 202
>gi|74148920|dbj|BAE32148.1| unnamed protein product [Mus musculus]
Length = 419
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 266 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 316
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 317 EKRINCPVA 325
>gi|348532335|ref|XP_003453662.1| PREDICTED: homeobox protein Nkx-6.1-like [Oreochromis niloticus]
Length = 320
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
++ V L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 182 QSSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 241
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 242 QNRRTKWRKKHAAEMASAKKKQD 264
>gi|345319715|ref|XP_001514263.2| PREDICTED: POU domain, class 2, transcription factor 3-like,
partial [Ornithorhynchus anatinus]
Length = 314
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + E+ P+ E + +AEQ+ + ++ V WFC+RR K
Sbjct: 164 RTSIETNIR---------LTLEKRFQENPKPSSEEITMIAEQLSMEKEVVRVWFCNRRQK 214
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 215 EKRINCPLA 223
>gi|355712865|gb|AES04494.1| POU class 2 homeobox 3 [Mustela putorius furo]
Length = 150
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 12 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 62
Query: 67 EKRL 70
EKR+
Sbjct: 63 EKRI 66
>gi|224134761|ref|XP_002327482.1| predicted protein [Populus trichocarpa]
gi|222836036|gb|EEE74457.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
T Q++ LEKF+ E +P E+ + Q++ ++GL KQ+ WF +RR +EK
Sbjct: 27 TCQQILQLEKFFKECPHPNEKQRRQLSRELGLEAKQIKFWFQNRRTQEK 75
>gi|403262551|ref|XP_003923641.1| PREDICTED: POU domain, class 2, transcription factor 3 [Saimiri
boliviensis boliviensis]
Length = 442
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 291 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 341
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 342 EKRINCPVA 350
>gi|345325373|ref|XP_001513218.2| PREDICTED: POU domain, class 2, transcription factor 1-like
[Ornithorhynchus anatinus]
Length = 744
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT + + +A+Q+ + ++ + WFC+RR K
Sbjct: 373 RTSIETNIR---------VALEKSFLENQKPTSDEITMIADQLNMEKEVIRVWFCNRRQK 423
Query: 67 EKRL 70
EKR+
Sbjct: 424 EKRI 427
>gi|440904909|gb|ELR55361.1| POU domain, class 2, transcription factor 3, partial [Bos grunniens
mutus]
Length = 433
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 282 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 332
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 333 EKRINCPVA 341
>gi|449485686|ref|XP_002193530.2| PREDICTED: POU domain, class 2, transcription factor 1 [Taeniopygia
guttata]
Length = 739
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT + + +A+Q+ + ++ + WFC+RR K
Sbjct: 379 RTSIETNIR---------VALEKSFLENQKPTSDEIAMIADQLNMEKEVIRVWFCNRRQK 429
Query: 67 EKRL 70
EKR+
Sbjct: 430 EKRI 433
>gi|9937306|gb|AAG02409.1|AF255045_1 vox [Danio rerio]
Length = 242
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+ I+ ++ TP Q+ LEK +N+HKY + + A ++GL+E Q+ WF +RR+K KR
Sbjct: 118 RRIRTKF-TPEQIDKLEKIFNKHKYLDAGERVKTALKLGLSETQIRTWFQNRRMKLKR 174
>gi|195035747|ref|XP_001989333.1| GH10114 [Drosophila grimshawi]
gi|193905333|gb|EDW04200.1| GH10114 [Drosophila grimshawi]
Length = 620
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 33/45 (73%)
Query: 26 ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
ALEK + ++ PT E +Q+A+++G+ ++ V WFC+RR KEKR+
Sbjct: 556 ALEKAFMANQKPTSEEITQLADRLGMEKEVVRVWFCNRRQKEKRI 600
>gi|296216413|ref|XP_002754486.1| PREDICTED: POU domain, class 2, transcription factor 3 isoform 2
[Callithrix jacchus]
Length = 442
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 291 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 341
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 342 EKRINCPVA 350
>gi|329663363|ref|NP_001192759.1| POU domain, class 2, transcription factor 3 [Bos taurus]
gi|296480158|tpg|DAA22273.1| TPA: PLA-1 protein-like [Bos taurus]
Length = 440
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 289 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 339
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 340 EKRINCPVA 348
>gi|332208478|ref|XP_003253332.1| PREDICTED: POU domain, class 2, transcription factor 3 [Nomascus
leucogenys]
Length = 436
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 285 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 335
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 336 EKRINCPVA 344
>gi|297269406|ref|XP_001100709.2| PREDICTED: POU domain, class 2, transcription factor 3-like [Macaca
mulatta]
gi|402895555|ref|XP_003910890.1| PREDICTED: POU domain, class 2, transcription factor 3 [Papio
anubis]
gi|355567142|gb|EHH23521.1| hypothetical protein EGK_06998 [Macaca mulatta]
gi|355752718|gb|EHH56838.1| hypothetical protein EGM_06322 [Macaca fascicularis]
Length = 436
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 285 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 335
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 336 EKRINCPVA 344
>gi|291383799|ref|XP_002708409.1| PREDICTED: POU transcription factor [Oryctolagus cuniculus]
Length = 449
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 298 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 348
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 349 EKRINCPVA 357
>gi|150416759|gb|ABR68849.1| orthopedia [Platynereis dumerilii]
Length = 267
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 3 SEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
S E+KV+ +K + R+ TPAQ+ LE+ + + YP M+ ++A +IGLTE +V WF
Sbjct: 44 SREDKVAKQKRHRTRF-TPAQLNELERCFAKTHYPDIFMREEIAMRIGLTESRVQVWF 100
>gi|384488144|gb|EIE80324.1| hypothetical protein RO3G_05029 [Rhizopus delemar RA 99-880]
Length = 413
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 10 LEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+E KR + + QV LE +NE+ P ++S++A+++ +TE+ V WF +RR KEK+
Sbjct: 1 MESTRKRTHLSTEQVSLLESSFNENSLPDSAVRSRLAQELSVTERTVQIWFQNRRAKEKK 60
Query: 70 LSV 72
+ +
Sbjct: 61 IKI 63
>gi|347658964|ref|NP_001231611.1| POU domain, class 2, transcription factor 3 isoform 2 [Homo
sapiens]
Length = 438
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 287 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 337
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 338 EKRINCPVA 346
>gi|5123781|emb|CAB45383.1| PLA-1 protein [Homo sapiens]
Length = 436
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 285 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 335
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 336 EKRINCPVA 344
>gi|281347824|gb|EFB23408.1| hypothetical protein PANDA_001963 [Ailuropoda melanoleuca]
Length = 390
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 252 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 302
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 303 EKRINCPVA 311
>gi|18859551|ref|NP_571773.1| ventral homeobox [Danio rerio]
gi|11065968|gb|AAG28408.1|AF193837_1 homeobox protein VEGA [Danio rerio]
Length = 242
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+ I+ ++ TP Q+ LEK +N+HKY + + A ++GL+E Q+ WF +RR+K KR
Sbjct: 118 RRIRTKF-TPEQIDKLEKIFNKHKYLDAGERVKTALKLGLSETQIRTWFQNRRMKLKR 174
>gi|2506533|sp|P31362.2|PO2F3_MOUSE RecName: Full=POU domain, class 2, transcription factor 3; AltName:
Full=Epoc-1; AltName: Full=Octamer-binding protein 11;
Short=Oct-11; AltName: Full=Octamer-binding
transcription factor 11; Short=OTF-11
gi|388914|gb|AAA16855.1| base pairs 945-995 correspond to helical domain 3 of the protein
[Mus musculus]
Length = 431
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 278 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 328
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 329 EKRINCPVA 337
>gi|397498528|ref|XP_003820033.1| PREDICTED: POU domain, class 2, transcription factor 3 [Pan
paniscus]
Length = 436
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 285 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 335
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 336 EKRINCPVA 344
>gi|119587907|gb|EAW67503.1| POU domain, class 2, transcription factor 3 [Homo sapiens]
Length = 436
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 285 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 335
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 336 EKRINCPVA 344
>gi|307213511|gb|EFN88920.1| Homeotic protein proboscipedia [Harpegnathos saltator]
Length = 731
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 10 LEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
LE + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 30 LENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMK 89
Query: 67 EKRLSVDE 74
KR ++ +
Sbjct: 90 HKRQTLSK 97
>gi|301756548|ref|XP_002914119.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Ailuropoda melanoleuca]
Length = 435
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 285 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 335
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 336 EKRINCPVA 344
>gi|5916188|gb|AAD55932.1|AF163856_1 homeoprotein CH-Hox1 [Chaetopterus variopedatus]
Length = 302
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE-KR 69
+ N+ R T Q+ LEK ++ +KY T + ++A +GL E QV WF +RR+K+ KR
Sbjct: 214 QPNLGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQVKIWFQNRRMKQKKR 273
Query: 70 LSVDEAFVGGRQDRSSGVIQDRGSG 94
+ V G + + QD G
Sbjct: 274 MKEGGVVVSGTDSQGTSPTQDSLGG 298
>gi|426370777|ref|XP_004052336.1| PREDICTED: POU domain, class 2, transcription factor 3 [Gorilla
gorilla gorilla]
Length = 436
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 285 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 335
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 336 EKRINCPVA 344
>gi|194378808|dbj|BAG63569.1| unnamed protein product [Homo sapiens]
Length = 438
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 287 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 337
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 338 EKRINCPVA 346
>gi|119226249|ref|NP_035269.2| POU domain, class 2, transcription factor 3 [Mus musculus]
gi|148693602|gb|EDL25549.1| mCG1529 [Mus musculus]
gi|151556704|gb|AAI48605.1| POU domain, class 2, transcription factor 3 [synthetic construct]
Length = 431
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 278 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 328
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 329 EKRINCPVA 337
>gi|62002543|gb|AAX58756.1| homeodomain protein Msx [Podocoryna carnea]
Length = 201
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Query: 16 RRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV 72
R+ +TP +Q++ LE+ + +Y + +++++EQ+ LTE Q+ WF +RR KEKRL
Sbjct: 102 RKPRTPFSASQLLTLEQNFKRKQYLSINERAELSEQLNLTETQIKIWFQNRRAKEKRLRE 161
Query: 73 DEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQ 105
E ++SS I GS R C T++
Sbjct: 162 AEF------EKSSRTIFP-GSNFRSCYCSPTRE 187
>gi|53515|emb|CAA79222.1| octamer binding protein-11 [Mus musculus]
Length = 403
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 278 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 328
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 329 EKRINCPVA 337
>gi|432946150|ref|XP_004083792.1| PREDICTED: homeobox protein Nkx-2.4-like isoform 2 [Oryzias
latipes]
Length = 344
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 3 SEENKVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
S ++ V+L +R+ + + AQV LE+ + + KY + + +A I LT QV W
Sbjct: 156 SAKSVVTLHAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLAGLIHLTPNQVKIW 215
Query: 60 FCHRRLKEKRLSVDEA--------------FVGGRQDRSSGVIQDRGSGLRQDSCGSTKQ 105
F + R K KR + D+A GR S V+ G R DSCGS
Sbjct: 216 FQNHRYKLKRQAKDKAAQQPQHDSGGGAASATTGRSSSVSPVLSKNAKGSRTDSCGSNNT 275
Query: 106 GD 107
G+
Sbjct: 276 GN 277
>gi|402216190|gb|AFQ35836.1| POU class 2 homeobox 3 transcript variant 1 [Ovis aries]
Length = 429
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 278 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 328
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 329 EKRINCPVA 337
>gi|165873673|gb|ABY67961.1| post1 hox protein [Capitella teleta]
Length = 176
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR+ + QV ALE Y+ Y T+ + +VA ++ LTE+Q+ W+ +RR+KEK+++
Sbjct: 105 KRKPYSKPQVSALENEYSTSTYITKARRKEVARELDLTERQIKIWYQNRRIKEKKIATKR 164
Query: 75 AFV 77
A V
Sbjct: 165 AKV 167
>gi|194212782|ref|XP_001501310.2| PREDICTED: POU domain, class 2, transcription factor 3-like [Equus
caballus]
Length = 686
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 535 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 585
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 586 EKRINCPMA 594
>gi|158257418|dbj|BAF84682.1| unnamed protein product [Homo sapiens]
Length = 436
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 285 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 335
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 336 EKRINCPVA 344
>gi|1173442|sp|P42571.1|PO2F3_RAT RecName: Full=POU domain, class 2, transcription factor 3; AltName:
Full=Octamer-binding protein 11; Short=Oct-11; AltName:
Full=Octamer-binding transcription factor 11;
Short=OTF-11; AltName: Full=Transcription factor Skn-1
Length = 430
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 278 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 328
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 329 EKRINCPVA 337
>gi|157787179|ref|NP_001099215.1| POU domain, class 2, transcription factor 3 [Rattus norvegicus]
gi|149041420|gb|EDL95261.1| POU domain, class 2, transcription factor 3, isoform CRA_a [Rattus
norvegicus]
Length = 430
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 278 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 328
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 329 EKRINCPVA 337
>gi|148664218|ref|NP_055167.2| POU domain, class 2, transcription factor 3 isoform 1 [Homo
sapiens]
gi|311033416|sp|Q9UKI9.3|PO2F3_HUMAN RecName: Full=POU domain, class 2, transcription factor 3; AltName:
Full=Octamer-binding protein 11; Short=Oct-11; AltName:
Full=Octamer-binding transcription factor 11;
Short=OTF-11; AltName: Full=Transcription factor PLA-1;
AltName: Full=Transcription factor Skn-1
gi|75517190|gb|AAI01650.1| POU class 2 homeobox 3 [Homo sapiens]
gi|167773585|gb|ABZ92227.1| POU class 2 homeobox 3 [synthetic construct]
Length = 436
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 285 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 335
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 336 EKRINCPVA 344
>gi|354502206|ref|XP_003513178.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Cricetulus griseus]
Length = 429
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 278 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 328
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 329 EKRINCPVA 337
>gi|335295018|ref|XP_003130003.2| PREDICTED: POU domain, class 2, transcription factor 3 [Sus scrofa]
Length = 305
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 154 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 204
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 205 EKRINCPVA 213
>gi|332024366|gb|EGI64564.1| Homeotic protein proboscipedia [Acromyrmex echinatior]
Length = 709
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 10 LEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
LE + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 30 LENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMK 89
Query: 67 EKRLSVDE 74
KR ++ +
Sbjct: 90 HKRQTLSK 97
>gi|307187179|gb|EFN72419.1| Homeotic protein proboscipedia [Camponotus floridanus]
Length = 654
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 10 LEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
LE + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 30 LENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMK 89
Query: 67 EKRLSVDE 74
KR ++ +
Sbjct: 90 HKRQTLSK 97
>gi|440803093|gb|ELR24005.1| homeobox domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 585
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 10 LEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
L++ +KR K +QV LE+ + + P+++MK ++A + GLT + V WF +RR KE+R
Sbjct: 508 LQRRLKRIKKDHSQVEILEEAFKNNPLPSKKMKEKLALEAGLTSRAVQVWFQNRRAKERR 567
>gi|5882207|gb|AAD55245.1|AF133895_1 POU domain transcription factor OCT11a [Homo sapiens]
Length = 436
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 285 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 335
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 336 EKRINCPVA 344
>gi|410900448|ref|XP_003963708.1| PREDICTED: homeobox protein vent1-like [Takifugu rubripes]
Length = 236
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 4 EENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
E K ++ ++ ++ T Q+ LEK +++HKY + + A+++GLTE QV WF +R
Sbjct: 105 ETEKEPQQRRVRTKFTT-EQIAKLEKIFSKHKYLDAGERMRTAQRLGLTETQVRTWFQNR 163
Query: 64 RLKEKR 69
R+K KR
Sbjct: 164 RMKLKR 169
>gi|393221007|gb|EJD06492.1| hypothetical protein FOMMEDRAFT_102289 [Fomitiporia mediterranea
MF3/22]
Length = 604
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR TP Q+ LE+F+ + PT + +++E +G+ E+Q WF +RR K K L
Sbjct: 110 KRSRVTPEQLTHLERFFAADRSPTAARRREISELLGMQERQTQIWFQNRRAKAKLL 165
>gi|357124875|ref|XP_003564122.1| PREDICTED: homeobox-leucine zipper protein ROC8-like [Brachypodium
distachyon]
Length = 714
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 29/167 (17%)
Query: 11 EKNIKRRYK--TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR--LK 66
+ N ++RY TP Q+ LE + E +P E ++Q++ ++GL +Q+ WF +RR +K
Sbjct: 18 QNNRRKRYHRHTPRQIQTLEGMFKECPHPDENQRAQLSRELGLEARQIKFWFQNRRTQMK 77
Query: 67 EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCHDF 126
+ D F+ D+ G L+ C + C
Sbjct: 78 AQHERADNCFLRAENDKIRCENIAMGEALKNVICPT--------------------CGGP 117
Query: 127 PATDLAYD----RNQYAAHASERDDTSSESSSFLQDRLYSESDKPYA 169
P + +D R + A E D SS +S FL R YS S P+
Sbjct: 118 PVGEDFFDEQKLRMENARLKEELDRVSSVASKFL-GRPYSMSQMPHG 163
>gi|121308831|dbj|BAF43722.1| transcription factor Hox2 [Metacrinus rotundus]
Length = 417
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K+KR+++ +A
Sbjct: 145 RTAFTTTQLLELEKEFHYNKYLCRPRRIEIAAMLELTERQVKVWFQNRRMKQKRVALKQA 204
>gi|405975009|gb|EKC39611.1| Homeobox protein EMX1 [Crassostrea gigas]
Length = 254
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGG 79
+P Q++ LE + ++ Y + + ++A ++GL+E QV WF +RR K KR+ +E
Sbjct: 163 SPTQLLQLEHAFEKNHYVVGQERKELALKLGLSETQVKVWFQNRRTKYKRVKAEEDMTMA 222
Query: 80 RQDRSSGVIQDRGSGLRQDSC 100
S VI+D+ + + D C
Sbjct: 223 PSKNRSHVIRDQVTK-KSDCC 242
>gi|432946148|ref|XP_004083791.1| PREDICTED: homeobox protein Nkx-2.4-like isoform 1 [Oryzias
latipes]
Length = 353
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 3 SEENKVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
S ++ V+L +R+ + + AQV LE+ + + KY + + +A I LT QV W
Sbjct: 165 SAKSVVTLHAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLAGLIHLTPNQVKIW 224
Query: 60 FCHRRLKEKRLSVDEA--------------FVGGRQDRSSGVIQDRGSGLRQDSCGSTKQ 105
F + R K KR + D+A GR S V+ G R DSCGS
Sbjct: 225 FQNHRYKLKRQAKDKAAQQPQHDSGGGAASATTGRSSSVSPVLSKNAKGSRTDSCGSNNT 284
Query: 106 GD 107
G+
Sbjct: 285 GN 286
>gi|449268974|gb|EMC79788.1| Homeobox protein CDX-4 [Columba livia]
Length = 260
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R T Q + LEK ++ ++Y T KS++A +GL+E+QV WF +RR KE++L
Sbjct: 153 RVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKERKL----- 207
Query: 76 FVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRML 121
I+ + S D G + Q D S+ P E+ S +
Sbjct: 208 ------------IKKKISQF--DGSGGSVQNDSGSLSPNEISSSLF 239
>gi|147899613|ref|NP_001082798.1| POU domain, class 2, transcription factor 1 [Danio rerio]
gi|134024827|gb|AAI34809.1| Pou2f1b protein [Danio rerio]
Length = 676
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 10/65 (15%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEK-FYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
+ S+E NI+ +ALEK F +++ PT E + +A+Q+ + ++ + WFC+RR
Sbjct: 322 RTSIETNIR---------VALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQ 372
Query: 66 KEKRL 70
KEKR+
Sbjct: 373 KEKRI 377
>gi|410972093|ref|XP_003992495.1| PREDICTED: POU domain, class 2, transcription factor 3 [Felis
catus]
Length = 423
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 9/66 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 273 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 323
Query: 67 EKRLSV 72
EKR++
Sbjct: 324 EKRINC 329
>gi|328873080|gb|EGG21447.1| homeobox transcription factor [Dictyostelium fasciculatum]
Length = 402
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 11 EKNIKRRYKTPA-QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
EK KRR + Q L+ F+N YP +E K +A Q+G+T V+ WF ++R + +R
Sbjct: 120 EKEKKRRTRLKKEQSTVLKSFFNRDCYPNKEEKESLANQLGMTYTAVTTWFSNKRQENRR 179
Query: 70 LSVDEAFVGGRQ 81
S D GGR+
Sbjct: 180 KSTDG--TGGRR 189
>gi|299473907|gb|ADJ18236.1| Hox7 protein [Gibbula varia]
Length = 247
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
V E+ R+ T Q + LEK ++ ++Y T + +VA +GLTE+Q+ WF +RR+K
Sbjct: 138 VHFEQKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEVAHMLGLTERQIKIWFQNRRMKW 197
Query: 68 KR 69
K+
Sbjct: 198 KK 199
>gi|348574063|ref|XP_003472810.1| PREDICTED: POU domain, class 2, transcription factor 3-like [Cavia
porcellus]
Length = 430
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 9/66 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 279 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 329
Query: 67 EKRLSV 72
EKR++
Sbjct: 330 EKRINC 335
>gi|426244694|ref|XP_004016155.1| PREDICTED: POU domain, class 2, transcription factor 3 [Ovis aries]
gi|402216192|gb|AFQ35837.1| POU class 2 homeobox 3 transcript variant 2 [Ovis aries]
Length = 396
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 245 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 295
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 296 EKRINCPVA 304
>gi|70570371|dbj|BAE06587.1| transcription factor protein [Ciona intestinalis]
Length = 221
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 14 IKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
I RR T Q++ L+K ++ Y T ++ +A+++ LTE Q+ WF +RR KEKR
Sbjct: 101 IGRRLFTGFQILELDKAFSIKPYLTRSQRALLAQKVNLTECQIKTWFQNRRTKEKR 156
>gi|351705894|gb|EHB08813.1| POU domain, class 2, transcription factor 3 [Heterocephalus glaber]
Length = 426
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 275 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 325
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 326 EKRINCPVA 334
>gi|198458260|ref|XP_001360970.2| GA10023 [Drosophila pseudoobscura pseudoobscura]
gi|198136279|gb|EAL25546.2| GA10023 [Drosophila pseudoobscura pseudoobscura]
Length = 447
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 LEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
L+KN ++R++T PAQ+ LE+ +++ YP M+ ++A +IGLTE +V WF
Sbjct: 133 LDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWF 186
>gi|149041421|gb|EDL95262.1| POU domain, class 2, transcription factor 3, isoform CRA_b [Rattus
norvegicus]
Length = 348
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 196 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 246
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 247 EKRINCPVA 255
>gi|242076842|ref|XP_002448357.1| hypothetical protein SORBIDRAFT_06g025750 [Sorghum bicolor]
gi|241939540|gb|EES12685.1| hypothetical protein SORBIDRAFT_06g025750 [Sorghum bicolor]
Length = 817
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 15 KRRYK--TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
KRRY TP Q+ LE + E +P E+ ++++++Q+GL +QV WF +RR K L+
Sbjct: 103 KRRYNRHTPHQIARLEAMFKEFPHPDEKQRAELSKQLGLEPRQVKFWFQNRRTNAKCLT 161
>gi|410896694|ref|XP_003961834.1| PREDICTED: POU domain, class 2, transcription factor 1-like
[Takifugu rubripes]
Length = 661
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 10/65 (15%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEK-FYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
+ S+E NI+ +ALEK F +++ PT E + +A+Q+ + ++ + WFC+RR
Sbjct: 315 RTSIETNIR---------VALEKSFLEQNQKPTSEEIAMIADQLNMEKEVIRVWFCNRRQ 365
Query: 66 KEKRL 70
KEKR+
Sbjct: 366 KEKRI 370
>gi|348530906|ref|XP_003452951.1| PREDICTED: POU domain, class 2, transcription factor 1-like
[Oreochromis niloticus]
Length = 667
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 10/65 (15%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEK-FYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
+ S+E NI+ +ALEK F +++ PT E + +A+Q+ + ++ + WFC+RR
Sbjct: 318 RTSIETNIR---------VALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQ 368
Query: 66 KEKRL 70
KEKR+
Sbjct: 369 KEKRI 373
>gi|195401635|ref|XP_002059418.1| otp [Drosophila virilis]
gi|194142424|gb|EDW58830.1| otp [Drosophila virilis]
Length = 466
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 LEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
L+KN ++R++T PAQ+ LE+ +++ YP M+ ++A +IGLTE +V WF
Sbjct: 116 LDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWF 169
>gi|477686|pir||B46216 transcription factor Skn-1, splice form i - rat
Length = 348
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 196 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 246
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 247 EKRINCPVA 255
>gi|66803130|ref|XP_635408.1| hypothetical protein DDB_G0291075 [Dictyostelium discoideum AX4]
gi|74996569|sp|Q54F46.1|WARA_DICDI RecName: Full=Homeobox protein Wariai; AltName: Full=Homeobox
protein 1; Short=DdHbx-1
gi|60463705|gb|EAL61885.1| hypothetical protein DDB_G0291075 [Dictyostelium discoideum AX4]
Length = 803
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR+ +P Q+ LEK + H++P ++SQ+A ++ +T + V WF +RR K + +
Sbjct: 165 KRKRTSPDQLKLLEKIFMAHQHPNLNLRSQLAVELHMTARSVQIWFQNRRAKARNMEFKP 224
Query: 75 AFVGGRQD 82
G D
Sbjct: 225 QLSHGGSD 232
>gi|392597820|gb|EIW87142.1| hypothetical protein CONPUDRAFT_69445 [Coniophora puteana
RWD-64-598 SS2]
Length = 715
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 6 NKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
+K S K + R+ +PAQ+ AL + ++++++P+ E ++++AE++G+ K V+ WF ++R
Sbjct: 72 DKASSSKKPRHRH-SPAQLAALNELFDQNEHPSLEDRTELAERLGMETKTVNAWFQNKRA 130
Query: 66 KEKR 69
K+
Sbjct: 131 STKK 134
>gi|195346232|ref|XP_002039670.1| GM15769 [Drosophila sechellia]
gi|194135019|gb|EDW56535.1| GM15769 [Drosophila sechellia]
Length = 418
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 LEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
L+KN ++R++T PAQ+ LE+ +++ YP M+ ++A +IGLTE +V WF
Sbjct: 112 LDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWF 165
>gi|194753698|ref|XP_001959147.1| GF12737 [Drosophila ananassae]
gi|190620445|gb|EDV35969.1| GF12737 [Drosophila ananassae]
Length = 440
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 LEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
L+KN ++R++T PAQ+ LE+ +++ YP M+ ++A +IGLTE +V WF
Sbjct: 113 LDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWF 166
>gi|443705253|gb|ELU01908.1| hypothetical protein CAPTEDRAFT_151262 [Capitella teleta]
Length = 272
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 3 SEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCH 62
SE+ S + +R T Q++ LEK ++ KY + +SQ+A Q+ L+E QV WF +
Sbjct: 144 SEQTSPSGKTRRRRTAFTSEQLLELEKEFHSKKYLSLTERSQIAHQLNLSEVQVKIWFQN 203
Query: 63 RRLKEKRLSVDEAFVGGRQDRS 84
RR K KR V V GR S
Sbjct: 204 RRAKWKR--VKAGVVHGRHGSS 223
>gi|432930943|ref|XP_004081537.1| PREDICTED: POU domain, class 2, transcription factor 1-like
[Oryzias latipes]
Length = 661
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 10/65 (15%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEK-FYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
+ S+E NI+ +ALEK F +++ PT E + +A+Q+ + ++ + WFC+RR
Sbjct: 310 RTSIETNIR---------VALEKSFVEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQ 360
Query: 66 KEKRL 70
KEKR+
Sbjct: 361 KEKRI 365
>gi|126331026|ref|XP_001364649.1| PREDICTED: homeobox protein Nkx-6.1-like [Monodelphis domestica]
Length = 376
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
++ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 237 QSSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 296
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 297 QNRRTKWRKKHAAEMATAKKKQD 319
>gi|90762056|gb|ABD97868.1| POUIII transcription factor [Acropora millepora]
Length = 389
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 15 KRRYKTPAQVM---ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
KR+ +T +V ALE + ++ P+ + +AE +GL ++ V WFC+RR KEKR++
Sbjct: 289 KRKKRTSIEVAVKGALENHFCKNPKPSAQEIGSLAENLGLDKEVVRVWFCNRRQKEKRMT 348
Query: 72 VDEAFVGGRQDRSSG 86
+ GG +D+ G
Sbjct: 349 A--SVTGGAEDQHVG 361
>gi|195585229|ref|XP_002082392.1| GD25245 [Drosophila simulans]
gi|194194401|gb|EDX07977.1| GD25245 [Drosophila simulans]
Length = 417
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 LEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
L+KN ++R++T PAQ+ LE+ +++ YP M+ ++A +IGLTE +V WF
Sbjct: 112 LDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWF 165
>gi|194881721|ref|XP_001974970.1| GG20822 [Drosophila erecta]
gi|190658157|gb|EDV55370.1| GG20822 [Drosophila erecta]
Length = 418
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 LEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
L+KN ++R++T PAQ+ LE+ +++ YP M+ ++A +IGLTE +V WF
Sbjct: 113 LDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWF 166
>gi|344293200|ref|XP_003418312.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Loxodonta africana]
Length = 576
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 425 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 475
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 476 EKRINCPVA 484
>gi|158702218|gb|ABW77440.1| homeobox protein HoxA9aa [Salmo salar]
Length = 271
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 3 SEENKVS--LEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVS 57
S +N VS L + R+ + P Q++ LEK + + Y T + + +VA Q+ LTE+QV
Sbjct: 189 SPDNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARQLNLTERQVK 248
Query: 58 GWFCHRRLKEKRLSVDEAFVGGRQD 82
WF +RR+K K+ + D GG +D
Sbjct: 249 IWFQNRRMKMKKCNKD----GGPKD 269
>gi|443916290|gb|ELU37413.1| homeodomain transcription factor [Rhizoctonia solani AG-1 IA]
Length = 868
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ +L+K KR TP Q+ LE+ +++ + PT + +++EQ+G+ E+Q WF +RR K
Sbjct: 34 RANLQKR-KRSRVTPEQLAHLERVFSQDRSPTAARRKEISEQLGMQERQTQIWFQNRRAK 92
Query: 67 EK 68
K
Sbjct: 93 AK 94
>gi|358256484|dbj|GAA47994.1| protein sine oculis [Clonorchis sinensis]
Length = 722
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 27 LEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQ--DRS 84
L ++YN + YP+ K ++AE GLT QVS WF +RR +++ + F G RQ R+
Sbjct: 256 LREWYNHNPYPSPRDKRELAETTGLTTTQVSNWFKNRRQRDRAID----FNGSRQGEHRT 311
Query: 85 SGVIQ 89
+G+I+
Sbjct: 312 AGIIE 316
>gi|195486718|ref|XP_002091624.1| GE13763 [Drosophila yakuba]
gi|194177725|gb|EDW91336.1| GE13763 [Drosophila yakuba]
Length = 421
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 LEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
L+KN ++R++T PAQ+ LE+ +++ YP M+ ++A +IGLTE +V WF
Sbjct: 118 LDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWF 171
>gi|195119480|ref|XP_002004259.1| GI19827 [Drosophila mojavensis]
gi|193909327|gb|EDW08194.1| GI19827 [Drosophila mojavensis]
Length = 471
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 LEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
L+KN ++R++T PAQ+ LE+ +++ YP M+ ++A +IGLTE +V WF
Sbjct: 122 LDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWF 175
>gi|440808048|gb|AGC24167.1| Phox2 [Lymnaea stagnalis]
Length = 343
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 2 HSEENKVSLEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
HS ++ VS EK +RR +T AQ+ LEK + E YP + ++A + LTE +V
Sbjct: 124 HSHDSSVSPEKRKQRRIRTTFTSAQLKELEKAFAETHYPDIYTREEIAMKTDLTEARVQV 183
Query: 59 WFCHRRLKEKRL 70
WF +RR K +++
Sbjct: 184 WFQNRRAKFRKM 195
>gi|328717132|ref|XP_001943169.2| PREDICTED: homeobox protein Nkx-6.2-like [Acyrthosiphon pisum]
Length = 266
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 6 NKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFC 61
N + EK+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 138 NNSNQEKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKVWFQ 197
Query: 62 HRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCG 101
+RR K ++ E R+ + D +R DS
Sbjct: 198 NRRTKWRKKHAAEMATAKRKQEEAADESDEDEDMRDDSAA 237
>gi|2707268|gb|AAB92245.1| homeobox-containing protein Wariai [Dictyostelium discoideum]
Length = 800
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR+ +P Q+ LEK + H++P ++SQ+A ++ +T + V WF +RR K + +
Sbjct: 165 KRKRTSPDQLKLLEKIFMAHQHPNLNLRSQLAVELHMTARSVQIWFQNRRAKARNMEFKP 224
Query: 75 AFVGGRQD 82
G D
Sbjct: 225 QLSHGGSD 232
>gi|350646139|emb|CCD59186.1| gsx family homeobox protein [Schistosoma mansoni]
Length = 504
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV 72
+R T Q+ LEK + H Y T + ++A + LTE+QV WF +RR+K KR+ +
Sbjct: 423 ERTAFTKHQICELEKEFTTHSYLTRLRRYEIAVALNLTERQVKVWFQNRRMKFKRMRI 480
>gi|195153964|ref|XP_002017893.1| GL17417 [Drosophila persimilis]
gi|194113689|gb|EDW35732.1| GL17417 [Drosophila persimilis]
Length = 449
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 LEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
L+KN ++R++T PAQ+ LE+ +++ YP M+ ++A +IGLTE +V WF
Sbjct: 135 LDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWF 188
>gi|395542187|ref|XP_003773016.1| PREDICTED: homeobox protein Nkx-6.1 [Sarcophilus harrisii]
Length = 379
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
++ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 240 QSSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 299
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 300 QNRRTKWRKKHAAEMATAKKKQD 322
>gi|195029465|ref|XP_001987593.1| GH19876 [Drosophila grimshawi]
gi|193903593|gb|EDW02460.1| GH19876 [Drosophila grimshawi]
Length = 456
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 LEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
L+KN ++R++T PAQ+ LE+ +++ YP M+ ++A +IGLTE +V WF
Sbjct: 108 LDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWF 161
>gi|195446483|ref|XP_002070801.1| GK12250 [Drosophila willistoni]
gi|194166886|gb|EDW81787.1| GK12250 [Drosophila willistoni]
Length = 233
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 8 VSLEKNIKRRYK-TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+SLEK + R T Q+M LE+ +++++Y + + ++A+++ LTE QV WF +RR+K
Sbjct: 35 LSLEKTKRSRTAFTSHQLMELEREFHQNRYLAKPRRMEIAQRLDLTESQVKIWFQNRRMK 94
Query: 67 EKRLS 71
K+L+
Sbjct: 95 SKKLA 99
>gi|268575336|ref|XP_002642647.1| C. briggsae CBR-MAB-5 protein [Caenorhabditis briggsae]
gi|9837166|gb|AAG00457.1|AF277989_1 MAB-5 [Caenorhabditis briggsae]
Length = 202
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R+ + +Q + LEK ++ HKY T + + +++E + LTE+QV WF +RR+K K+ + E
Sbjct: 123 RQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKKEAKGEG 182
>gi|158564033|sp|Q9C056.2|NKX62_HUMAN RecName: Full=Homeobox protein Nkx-6.2; AltName: Full=Homeobox
protein NK-6 homolog B
Length = 277
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 142 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 201
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDY-RSIDPR---EVQSRM 120
K KR +V+ A +QD + ++ GS D +Y R +DP E +R+
Sbjct: 202 KWRKRHAVEMASAKKKQDSDAEKLKVGGSDAEDDD-------EYNRPLDPNSDDEKITRL 254
Query: 121 LYCH 124
L H
Sbjct: 255 LKKH 258
>gi|116007730|ref|NP_001036563.1| orthopedia, isoform C [Drosophila melanogaster]
gi|77403885|gb|ABA81821.1| RE44291p [Drosophila melanogaster]
gi|113194669|gb|ABI31108.1| orthopedia, isoform C [Drosophila melanogaster]
Length = 271
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 LEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
L+KN ++R++T PAQ+ LE+ +++ YP M+ ++A +IGLTE +V WF
Sbjct: 8 LDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWF 61
>gi|156362|gb|AAA28106.1| DNA-binding protein mab5, partial [Caenorhabditis elegans]
Length = 211
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R+ + +Q + LEK ++ HKY T + + +++E + LTE+QV WF +RR+K K+ + E
Sbjct: 132 RQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKKEAKGEG 191
>gi|432110436|gb|ELK34053.1| POU domain, class 2, transcription factor 3 [Myotis davidii]
Length = 301
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 5 ENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
+ + S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR
Sbjct: 208 KKRTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRR 258
Query: 65 LKEKRLSVDEA 75
KEKR++ A
Sbjct: 259 QKEKRINCPVA 269
>gi|269784917|ref|NP_001161610.1| Nkx6-like transcription factor [Saccoglossus kowalevskii]
gi|268054217|gb|ACY92595.1| Nkx6-like transcription factor [Saccoglossus kowalevskii]
Length = 272
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 8 VSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+SL+K+ KR++ P Q+ ALEK + + KY ++++A +G++E QV WF +R
Sbjct: 148 MSLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYALGMSESQVKVWFQNR 207
Query: 64 RLK-EKRLSVDEAFVGGRQDRSSGVIQD 90
R K KR + + A +Q+ + + D
Sbjct: 208 RTKWRKRHAAEMATAKKKQEETENMAGD 235
>gi|217035828|gb|ACJ74384.1| Hox6 [Branchiostoma lanceolatum]
Length = 227
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 3 SEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCH 62
S + + EK R+ T Q + LEK ++ +KY T + + ++A +GLTE+Q+ WF +
Sbjct: 125 SSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGLTERQIKIWFQN 184
Query: 63 RRLKEKR 69
RR+K K+
Sbjct: 185 RRMKWKK 191
>gi|153791646|ref|NP_001093386.1| NK6 homeobox 1 [Xenopus laevis]
gi|148540779|gb|ABQ86050.1| NK6 transcription factor related locus 1 [Xenopus laevis]
gi|213623166|gb|AAI69378.1| NK6 transcription factor related locus 1 [Xenopus laevis]
gi|213625970|gb|AAI69380.1| NK6 transcription factor related locus 1 [Xenopus laevis]
Length = 351
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ V L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 213 QGSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 272
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 273 QNRRTKWRKKHAAEMATAKKKQD 295
>gi|348515495|ref|XP_003445275.1| PREDICTED: homeobox protein CDX-4-like [Oreochromis niloticus]
Length = 271
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK ++ ++Y T KS++A +GL+E+QV WF +RR KE++L + G+ D
Sbjct: 162 QRLELEKEFHFNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKLIKKKM---GQSD 218
Query: 83 RSSGVIQ-DRGS 93
SSG + D GS
Sbjct: 219 GSSGSVHSDPGS 230
>gi|52631650|gb|AAU85250.1| empty spiracles protein, partial [Euscorpius flavicaudis]
Length = 99
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGG 79
+P Q++ LE + + Y + Q+A+ +GLTE QV WF +RR K KRL V E
Sbjct: 3 SPTQLLKLEHAFENNHYVVGAERKQLAQSLGLTETQVKVWFQNRRTKHKRL-VQEDEDQT 61
Query: 80 RQDRSSGVIQDRGS 93
Q SS V Q S
Sbjct: 62 EQRTSSDVTQSASS 75
>gi|17554302|ref|NP_498695.1| Protein MAB-5 [Caenorhabditis elegans]
gi|21264452|sp|P10038.3|MAB5_CAEEL RecName: Full=Homeobox protein mab-5; AltName: Full=Protein male
abnormal 5
gi|9837168|gb|AAG00458.1|AF277990_1 MAB-5 [Caenorhabditis elegans]
gi|373253909|emb|CCD63641.1| Protein MAB-5 [Caenorhabditis elegans]
Length = 200
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R+ + +Q + LEK ++ HKY T + + +++E + LTE+QV WF +RR+K K+ + E
Sbjct: 121 RQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKKEAKGEG 180
>gi|340374844|ref|XP_003385947.1| PREDICTED: hypothetical protein LOC100636153 [Amphimedon
queenslandica]
gi|184191105|gb|ACC76765.1| BarH [Amphimedon queenslandica]
Length = 313
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R T +Q+ LE +N+ KY T+ + ++A+ +GLTEK + W+ +RR K KR DE
Sbjct: 223 RTTFTSSQLQQLETRFNQQKYLTKLDRCRMAQSLGLTEKHIKTWYQNRRTKWKRECTDEM 282
Query: 76 F 76
+
Sbjct: 283 W 283
>gi|60678586|gb|AAX33662.1| Dbuz\pb-PB [Drosophila buzzatii]
Length = 758
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 9 SLEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
S++ + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+
Sbjct: 163 SIKNGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRM 222
Query: 66 KEKRLSV 72
K KR ++
Sbjct: 223 KHKRQTL 229
>gi|431916147|gb|ELK16399.1| Homeobox protein Nkx-6.1 [Pteropus alecto]
Length = 359
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 219 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 278
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 279 QNRRTKWRKKHAAEMATAKKKQD 301
>gi|348530450|ref|XP_003452724.1| PREDICTED: homeobox protein Nkx-3.1-like [Oreochromis niloticus]
Length = 194
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGG 79
T QV+ LEK +N KY + ++Q+A + LTE QV WF +RR K KR F
Sbjct: 91 THLQVLELEKKFNHQKYLSAPERAQLARTLRLTETQVKIWFQNRRYKTKRKQQTSEFC-- 148
Query: 80 RQDRSSGVIQDRGSGLRQDSCGST 103
+ + G GL++DS S+
Sbjct: 149 -----KDLYKAEGLGLKEDSVRSS 167
>gi|156551129|ref|XP_001603788.1| PREDICTED: hypothetical protein LOC100120119 [Nasonia vitripennis]
Length = 918
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 214 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 273
Query: 68 KR--LSVDEA 75
KR LS DE
Sbjct: 274 KRQTLSKDEG 283
>gi|358342075|dbj|GAA49624.1| homeobox protein Hox-D12 [Clonorchis sinensis]
Length = 318
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV 72
KRR T Q +ALE Y E Y T + + +++ ++ L+E+QV WF +RR+K K+L +
Sbjct: 133 KRRPYTRFQTLALENEYIETSYITRQKRLEISSRLHLSERQVKVWFQNRRMKSKKLEL 190
>gi|443692141|gb|ELT93814.1| hypothetical protein CAPTEDRAFT_99648, partial [Capitella teleta]
Length = 107
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 3 SEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCH 62
S+E+ S +K + R+ TPAQ+ LE +++ YP M+ ++A +IGLTE +V WF +
Sbjct: 40 SQESPGSKQKRHRTRF-TPAQINELEHAFSKTHYPDIFMREELALRIGLTESRVQVWFQN 98
Query: 63 RRLKEKR 69
RR K K+
Sbjct: 99 RRAKWKK 105
>gi|6016212|sp|Q60554.1|NKX61_MESAU RecName: Full=Homeobox protein Nkx-6.1; AltName: Full=Homeobox
protein NK-6 homolog A
gi|587467|emb|CAA57166.1| NKx6.1 [Mesocricetus auratus]
Length = 364
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 285 QNRRTKWRKKHAAEMATAKKKQD 307
>gi|520616|emb|CAA84518.1| Hox-6 homeodomain protein [Branchiostoma floridae]
gi|745778|prf||2016458E Hox-6 gene
Length = 227
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 3 SEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCH 62
S + + EK R+ T Q + LEK ++ +KY T + + ++A +GLTE+Q+ WF +
Sbjct: 125 SSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGLTERQIKIWFQN 184
Query: 63 RRLKEKR 69
RR+K K+
Sbjct: 185 RRMKWKK 191
>gi|13929036|ref|NP_113925.1| homeobox protein Nkx-6.1 [Rattus norvegicus]
gi|6016213|sp|O35762.1|NKX61_RAT RecName: Full=Homeobox protein Nkx-6.1; AltName: Full=Homeobox
protein NK-6 homolog A
gi|2218137|gb|AAB61665.1| homeodomain protein Nkx6.1 [Rattus norvegicus]
gi|149046765|gb|EDL99539.1| rCG37924, isoform CRA_a [Rattus norvegicus]
Length = 365
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 226 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 285
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 286 QNRRTKWRKKHAAEMATAKKKQD 308
>gi|308481900|ref|XP_003103154.1| CRE-MAB-5 protein [Caenorhabditis remanei]
gi|308260259|gb|EFP04212.1| CRE-MAB-5 protein [Caenorhabditis remanei]
Length = 199
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R+ + +Q + LEK ++ HKY T + + +++E + LTE+QV WF +RR+K K+ + E
Sbjct: 120 RQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKKEAKGEG 179
>gi|449489457|ref|XP_002190945.2| PREDICTED: POU domain, class 2, transcription factor 3-like
[Taeniopygia guttata]
Length = 439
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 289 RTSIETNIRS---------TLEKRFQDNPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQK 339
Query: 67 EKRLSV 72
EKR+S
Sbjct: 340 EKRISC 345
>gi|45553273|ref|NP_996163.1| proboscipedia, isoform B [Drosophila melanogaster]
gi|45446404|gb|AAS65120.1| proboscipedia, isoform B [Drosophila melanogaster]
Length = 777
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 9 SLEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
S++ + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+
Sbjct: 187 SIKNGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRM 246
Query: 66 KEKRLSV 72
K KR ++
Sbjct: 247 KHKRQTL 253
>gi|332819286|ref|XP_003310328.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.1 [Pan
troglodytes]
Length = 367
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
Query: 61 CHRRLKEKRLSVDEAFVGGRQDRS 84
+RR K ++ E R+ S
Sbjct: 285 QNRRTKWRKKHAAEMATAKRKQDS 308
>gi|296196110|ref|XP_002745710.1| PREDICTED: homeobox protein Nkx-6.1 [Callithrix jacchus]
Length = 366
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 285 QNRRTKWRKKHAAEMATAKKKQD 307
>gi|313226263|emb|CBY21407.1| unnamed protein product [Oikopleura dioica]
Length = 390
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
K I+ + TPAQ+M LE+ + +++Y + +A+ +GLTE QV WF +RR K KR
Sbjct: 307 KRIRTAF-TPAQLMRLEQEFKKNQYVVGAERKTLAKNLGLTETQVKVWFQNRRTKYKR 363
>gi|268575360|ref|XP_002642659.1| Hypothetical protein CBG00043 [Caenorhabditis briggsae]
Length = 163
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
R+ + +Q + LEK ++ HKY T + + +++E + LTE+QV WF +RR+K K+
Sbjct: 84 RQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKK 137
>gi|297673907|ref|XP_002814987.1| PREDICTED: homeobox protein Nkx-6.1 [Pongo abelii]
Length = 367
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 285 QNRRTKWRKKHAAEMATAKKKQD 307
>gi|21450629|ref|NP_659204.1| homeobox protein Nkx-6.1 [Mus musculus]
gi|27734433|sp|Q99MA9.1|NKX61_MOUSE RecName: Full=Homeobox protein Nkx-6.1; AltName: Full=Homeobox
protein NK-6 homolog A
gi|13650146|gb|AAK37567.1|AF357883_1 homeodomain transcription factor [Mus musculus]
gi|187952779|gb|AAI38020.1| NK6 homeobox 1 [Mus musculus]
gi|187953783|gb|AAI38021.1| NK6 homeobox 1 [Mus musculus]
Length = 365
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 226 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 285
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 286 QNRRTKWRKKHAAEMATAKKKQD 308
>gi|403263402|ref|XP_003924023.1| PREDICTED: homeobox protein Nkx-6.1 [Saimiri boliviensis
boliviensis]
Length = 366
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 285 QNRRTKWRKKHAAEMATAKKKQD 307
>gi|341900677|gb|EGT56612.1| hypothetical protein CAEBREN_04649 [Caenorhabditis brenneri]
Length = 198
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R+ + +Q + LEK ++ HKY T + + +++E + LTE+QV WF +RR+K K+ + E
Sbjct: 119 RQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKKEAKGEG 178
>gi|109074222|ref|XP_001104458.1| PREDICTED: homeobox protein Nkx-6.1 [Macaca mulatta]
Length = 366
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 285 QNRRTKWRKKHAAEMATAKKKQD 307
>gi|405965810|gb|EKC31164.1| Brain-specific homeobox protein [Crassostrea gigas]
Length = 311
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
Q+ LEK Y KY + +AE++GL+++QV WF +RR+KEKR D+
Sbjct: 149 QIHDLEKRYQAQKYLPANERQALAEKLGLSDQQVKTWFQNRRMKEKRQKRDD 200
>gi|358340401|dbj|GAA48301.1| homeobox protein EMX2 [Clonorchis sinensis]
Length = 483
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
+P Q+ LE + ++ Y + + +A +GLTE QV WF +RR K KR+ +DE
Sbjct: 338 SPQQLFQLENMFEQNHYIVGQERKDLASSLGLTETQVKVWFQNRRTKFKRVRLDE 392
>gi|347970367|ref|XP_313453.5| AGAP003671-PA [Anopheles gambiae str. PEST]
gi|333468900|gb|EAA08821.5| AGAP003671-PA [Anopheles gambiae str. PEST]
Length = 485
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+H+ E S K R + AQV LE+ + + +Y + +S++A+ + LTE QV WF
Sbjct: 227 LHTSEEMPSARKKRSRAAFSHAQVFELERRFAQQRYLSGPERSELAKNLRLTETQVKIWF 286
Query: 61 CHRRLKEKRLSVDE 74
+RR K KR + +
Sbjct: 287 QNRRYKTKRKQIQQ 300
>gi|260835435|ref|XP_002612714.1| hypothetical protein BRAFLDRAFT_95001 [Branchiostoma floridae]
gi|160421813|gb|ABX39490.1| AmphiHox6 [Branchiostoma floridae]
gi|229298093|gb|EEN68723.1| hypothetical protein BRAFLDRAFT_95001 [Branchiostoma floridae]
Length = 227
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 3 SEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCH 62
S + + EK R+ T Q + LEK ++ +KY T + + ++A +GLTE+Q+ WF +
Sbjct: 125 SSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGLTERQIKIWFQN 184
Query: 63 RRLKEKR 69
RR+K K+
Sbjct: 185 RRMKWKK 191
>gi|74001795|ref|XP_544960.2| PREDICTED: homeobox protein Nkx-6.1 isoform 1 [Canis lupus
familiaris]
Length = 366
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 226 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 285
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 286 QNRRTKWRKKHAAEMATAKKKQD 308
>gi|195498941|ref|XP_002096738.1| GE25834 [Drosophila yakuba]
gi|194182839|gb|EDW96450.1| GE25834 [Drosophila yakuba]
Length = 784
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 9 SLEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
S++ + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+
Sbjct: 187 SIKNGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRM 246
Query: 66 KEKRLSV 72
K KR ++
Sbjct: 247 KHKRQTL 253
>gi|336383436|gb|EGO24585.1| hypothetical protein SERLADRAFT_438194 [Serpula lacrymans var.
lacrymans S7.9]
Length = 645
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
KR TP Q++ LE+F++ + PT + +++E +G+ E+Q WF +RR K K
Sbjct: 173 KRSRVTPEQLVHLERFFSVDRSPTAGRRKEISELLGMQERQTQIWFQNRRAKAK 226
>gi|358416571|ref|XP_594323.5| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC516179
[Bos taurus]
Length = 414
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 279 LDKDGKKKHSRPTFSGQQTFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 338
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDY-RSIDPR---EVQSRM 120
K KR + + A +QD + ++ GS D +Y R +DP E +R+
Sbjct: 339 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDD-------EYNRPLDPNWDDEKITRL 391
Query: 121 LYCHDFPATDLAYDRNQYAAHAS 143
L H P LA A AS
Sbjct: 392 LKKHRAPNLALASPCGGGAGDAS 414
>gi|329664496|ref|NP_001193167.1| homeobox protein Nkx-6.1 [Bos taurus]
gi|296486366|tpg|DAA28479.1| TPA: homeodomain transcription factor Nkx6.1-like [Bos taurus]
Length = 366
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 223 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 282
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 283 QNRRTKWRKKHAAEMATAKKKQD 305
>gi|332233413|ref|XP_003265896.1| PREDICTED: homeobox protein Nkx-6.1 [Nomascus leucogenys]
Length = 368
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 285 QNRRTKWRKKHAAEMATAKKKQD 307
>gi|359319398|ref|XP_853080.3| PREDICTED: POU domain, class 2, transcription factor 3 [Canis lupus
familiaris]
Length = 396
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 9/66 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 285 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 335
Query: 67 EKRLSV 72
EKR++
Sbjct: 336 EKRINC 341
>gi|336370660|gb|EGN99000.1| hypothetical protein SERLA73DRAFT_90145 [Serpula lacrymans var.
lacrymans S7.3]
Length = 570
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
KR TP Q++ LE+F++ + PT + +++E +G+ E+Q WF +RR K K
Sbjct: 98 KRSRVTPEQLVHLERFFSVDRSPTAGRRKEISELLGMQERQTQIWFQNRRAKAK 151
>gi|334330119|ref|XP_001380318.2| PREDICTED: POU domain, class 2, transcription factor 3-like
[Monodelphis domestica]
Length = 455
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 306 RTSIETNIR---------LTLEKRFQDNPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQK 356
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 357 EKRINCPMA 365
>gi|296237706|ref|XP_002763862.1| PREDICTED: homeobox protein CDX-4-like [Callithrix jacchus]
Length = 284
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 22/113 (19%)
Query: 7 KVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+V+ + K +Y+ T Q + LEK ++ ++Y T KS++A +GL+E+QV WF +R
Sbjct: 165 QVTGKTRTKEKYRIVYTDHQRLELEKEFHCNRYITTRRKSELAINLGLSERQVKIWFQNR 224
Query: 64 RLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREV 116
R KE+++ I+ + S + +S G + Q D SI PRE+
Sbjct: 225 RAKERKM-----------------IKKKIS--QFESSGGSVQSDSGSISPREL 258
>gi|111120318|ref|NP_006159.2| homeobox protein Nkx-6.1 [Homo sapiens]
gi|288558819|sp|P78426.2|NKX61_HUMAN RecName: Full=Homeobox protein Nkx-6.1; AltName: Full=Homeobox
protein NK-6 homolog A
gi|119626354|gb|EAX05949.1| NK6 transcription factor related, locus 1 (Drosophila) [Homo
sapiens]
gi|182888287|gb|AAI60030.1| NK6 homeobox 1 [synthetic construct]
Length = 367
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 285 QNRRTKWRKKHAAEMATAKKKQD 307
>gi|56714075|gb|AAW24008.1| homeodomain protein Emx [Oikopleura dioica]
Length = 390
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
K I+ + TPAQ+M LE+ + +++Y + +A+ +GLTE QV WF +RR K KR
Sbjct: 307 KRIRTAF-TPAQLMRLEQEFKKNQYVVGAERKTLAKNLGLTETQVKVWFQNRRTKYKR 363
>gi|308220154|gb|ADO22649.1| SIX class homeobox transcription factor SIX27 [Mnemiopsis leidyi]
Length = 621
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 23/113 (20%)
Query: 14 IKRRYKTPAQVM---------------ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
I+R+Y PA + L +Y ++KYP+ K Q+AE GLT QVS
Sbjct: 230 IRRKYPLPATIWDGEETSYCFKEKSRNRLRDWYAQNKYPSPHDKRQLAETTGLTLTQVSN 289
Query: 59 WFCHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSI 111
WF +RR +++ GG ++ + ++ GS SCGS + D + +
Sbjct: 290 WFKNRRQRDRAAETKSKRGGGGGEKDT---ENEGS-----SCGSGDEEDGKDV 334
>gi|157154301|ref|NP_001016583.2| NK6 homeobox 1 [Xenopus (Silurana) tropicalis]
gi|148540783|gb|ABQ86052.1| NK6 transcription factor related locus 1 [Xenopus (Silurana)
tropicalis]
Length = 342
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ V L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 204 QGSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 263
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 264 QNRRTKWRKKHAAEMATAKKKQD 286
>gi|291401480|ref|XP_002717090.1| PREDICTED: NK6 transcription factor related, locus 1 [Oryctolagus
cuniculus]
Length = 369
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 285 QNRRTKWRKKHAAEMATAKKKQD 307
>gi|1894911|gb|AAD11962.1| NK homeobox protein [Homo sapiens]
Length = 367
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 285 QNRRTKWRKKHAAEMATAKKKQD 307
>gi|402869337|ref|XP_003898719.1| PREDICTED: homeobox protein Nkx-6.1 [Papio anubis]
Length = 366
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 285 QNRRTKWRKKHAAEMATAKKKQD 307
>gi|338723381|ref|XP_003364713.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.1-like
[Equus caballus]
Length = 442
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 285 QNRRTKWRKKHAAEMATAKKKQD 307
>gi|313245977|emb|CBY34950.1| unnamed protein product [Oikopleura dioica]
Length = 390
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
K I+ + TPAQ+M LE+ + +++Y + +A+ +GLTE QV WF +RR K KR
Sbjct: 307 KRIRTAF-TPAQLMRLEQEFKKNQYVVGAERKTLAKNLGLTETQVKVWFQNRRTKYKR 363
>gi|426344856|ref|XP_004039121.1| PREDICTED: homeobox protein Nkx-6.1 [Gorilla gorilla gorilla]
Length = 324
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 182 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 241
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 242 QNRRTKWRKKHAAEMATAKKKQD 264
>gi|209489449|gb|ACI49209.1| hypothetical protein Csp3_JD04.008 [Caenorhabditis angaria]
Length = 191
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%)
Query: 22 AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
+Q + LEK ++ HKY T + + +++E + LTE+QV WF +RR+K K+ + E
Sbjct: 123 SQTLELEKEFHYHKYLTRKRRQEISESLHLTERQVKIWFQNRRMKHKKEAKGEG 176
>gi|409083658|gb|EKM84015.1| hypothetical protein AGABI1DRAFT_110616 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 490
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 41/62 (66%)
Query: 10 LEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
L + R +PAQ+ AL + ++++++P+ E++S +A+++G+ K V+ WF ++R K+
Sbjct: 16 LSQKKPRHRHSPAQLAALNELFDKNEHPSLELRSALADRLGMETKTVNAWFQNKRASTKK 75
Query: 70 LS 71
S
Sbjct: 76 RS 77
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
+P Q+ L K Y + +P+ E + +AE+IG+ + ++ WF ++R K+ DE+
Sbjct: 161 SPDQIEELRKLYAINPHPSAEERQVIAERIGMRYQSITNWFQNQRSLAKKRREDES 216
>gi|307203154|gb|EFN82333.1| POU domain, class 2, transcription factor 1 [Harpegnathos saltator]
Length = 529
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQV-----MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQV 56
+S N ++ + I RR K + +ALEK + ++ PT E + +A+ + + ++ V
Sbjct: 380 NSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFIQNPKPTSEEITILADSLAMEKEVV 439
Query: 57 SGWFCHRRLKEKRLSVDEAFVG 78
WFC+RR KEKR++ A +G
Sbjct: 440 RVWFCNRRQKEKRINPPTAVMG 461
>gi|299473905|gb|ADJ18235.1| Lox5 protein [Gibbula varia]
Length = 200
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
V E+ R+ T Q + LEK ++ ++Y T + +VA +GLTE+Q+ WF +RR+K
Sbjct: 10 VHFEQKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEVAHMLGLTERQIKIWFQNRRMKW 69
Query: 68 KR 69
K+
Sbjct: 70 KK 71
>gi|357448593|ref|XP_003594572.1| Homeobox-leucine zipper protein ROC8 [Medicago truncatula]
gi|355483620|gb|AES64823.1| Homeobox-leucine zipper protein ROC8 [Medicago truncatula]
Length = 157
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGG 79
+PAQ + LE+ + KYPT E K+++A+++ L KQV+ WF ++R + K + E
Sbjct: 26 SPAQRLRLEEIFLTVKYPTHEQKNEIAKELDLEPKQVNWWFTYKRAQVKNATQKEVNAAL 85
Query: 80 RQDRSSGV-IQDRGSGLRQDSCGSTKQGDYR 109
R ++ + + +R + +C ++ R
Sbjct: 86 RAEKEILLEMMERQKNVFCQACRDSRLKQLR 116
>gi|260828237|ref|XP_002609070.1| nk homeobox 6 [Branchiostoma floridae]
gi|229294424|gb|EEN65080.1| nk homeobox 6 [Branchiostoma floridae]
Length = 291
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 8 VSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
V+++K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF +R
Sbjct: 151 VTVDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNR 210
Query: 64 RLKEKR 69
R K ++
Sbjct: 211 RTKWRK 216
>gi|397911066|gb|AFO68809.1| homeodomain-containing protein Hox6, partial [Branchiostoma
lanceolatum]
Length = 215
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 3 SEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCH 62
S + + EK R+ T Q + LEK ++ +KY T + + ++A +GLTE+Q+ WF +
Sbjct: 118 SSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGLTERQIKIWFQN 177
Query: 63 RRLKEKR 69
RR+K K+
Sbjct: 178 RRMKWKK 184
>gi|327276180|ref|XP_003222848.1| PREDICTED: POU domain, class 2, transcription factor 3-like [Anolis
carolinensis]
Length = 436
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 286 RTSIETNIRS---------TLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 336
Query: 67 EKRLSV 72
EKR+S
Sbjct: 337 EKRISC 342
>gi|301755616|ref|XP_002913657.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.1-like
[Ailuropoda melanoleuca]
Length = 461
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 224 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 283
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 284 QNRRTKWRKKHAAEMATAKKKQD 306
>gi|425774878|gb|EKV13171.1| Homeobox transcription factor (RfeB), putative [Penicillium
digitatum PHI26]
gi|425780974|gb|EKV18957.1| Homeobox transcription factor (RfeB), putative [Penicillium
digitatum Pd1]
Length = 601
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE +N++ PT + ++A I +TE+ V WF +RR K K L
Sbjct: 57 QKNNKRQRATQDQLVLLEIEFNKNPTPTAATRERIASDINMTERSVQIWFQNRRAKIKML 116
Query: 71 S 71
+
Sbjct: 117 A 117
>gi|391326879|ref|XP_003737937.1| PREDICTED: homeobox protein Nkx-2.6-like [Metaseiulus occidentalis]
Length = 185
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 10 LEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
L+K R T AQV ALE+ ++ +Y + ++++A +GLTE QV WF +RR K KR
Sbjct: 43 LKKKRCRAAFTHAQVCALERRFSSQRYLSSPERAELARSLGLTETQVKIWFQNRRYKTKR 102
>gi|346327661|gb|EGX97257.1| homeoprotein [Cordyceps militaris CM01]
Length = 626
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q+ LE +N++ PT ++ ++A +I +TE+ V WF +RR K K L
Sbjct: 69 QKNHKRQRATQDQLSTLEVEFNKNPTPTANVRDRIAGEINMTERSVQIWFQNRRAKIKLL 128
Query: 71 S 71
+
Sbjct: 129 A 129
>gi|222478312|gb|ACM62733.1| Hox9-14A homeodomain transcription factor protein [Clytia
hemisphaerica]
Length = 291
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR T Q+ LEK + +++Y T E + +++ Q+ LTE+Q+ WF +RR+K KR
Sbjct: 192 KRTSYTRRQIYDLEKEFAKNRYITRERRIEMSLQLNLTERQIKTWFQNRRMKTKR 246
>gi|195446481|ref|XP_002070800.1| GK10831 [Drosophila willistoni]
gi|194166885|gb|EDW81786.1| GK10831 [Drosophila willistoni]
Length = 816
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 193 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 252
Query: 68 KRLSV 72
KR ++
Sbjct: 253 KRQTL 257
>gi|395834160|ref|XP_003790080.1| PREDICTED: homeobox protein Nkx-6.1 [Otolemur garnettii]
Length = 366
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 285 QNRRTKWRKKHAAEMATAKKKQD 307
>gi|220898177|gb|ACL81433.1| HoxA14 [Latimeria menadoensis]
Length = 232
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 37/52 (71%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
Q+ LE+ + E+++ T E++ ++ ++GLTE+QV WF ++R KEK+L + +
Sbjct: 163 QITELERAFEENRFLTPEIRQNISVKLGLTERQVKIWFQNQRQKEKKLLLRQ 214
>gi|432901517|ref|XP_004076874.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Oryzias latipes]
Length = 378
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NIK M LEK ++++ P E S ++EQ+ + ++ V WFC+RR K
Sbjct: 242 RTSIETNIK---------MTLEKRFHDNPKPNSEEISLISEQLSMEKEVVRVWFCNRRQK 292
Query: 67 EKRLSVDEAFV 77
EKR+ A +
Sbjct: 293 EKRIYCPVATI 303
>gi|397911064|gb|AFO68808.1| homeodomain-containing protein Hox4, partial [Branchiostoma
lanceolatum]
Length = 118
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T QV+ LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K K+
Sbjct: 22 TRQQVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 71
>gi|332692495|gb|AEE90174.1| Homeobox B9b [Anguilla anguilla]
Length = 247
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA Q+ LTE+QV WF +RR+K K+++ D+
Sbjct: 185 KRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARQLNLTERQVKIWFQNRRMKMKKMNKDQ 244
>gi|391348309|ref|XP_003748390.1| PREDICTED: T-cell leukemia homeobox protein 3-like [Metaseiulus
occidentalis]
Length = 354
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFC 61
H +N+ ++ R T Q+ LEK +++ KY ++Q+A+Q+ +T+ QV WF
Sbjct: 181 HPYQNRTPPKRKKPRTSFTRMQICELEKRFHKQKYLASAERAQLAKQLKMTDAQVKTWFQ 240
Query: 62 HRRLKEKRLSVDE 74
+RR K +R + +E
Sbjct: 241 NRRTKWRRQTAEE 253
>gi|363742533|ref|XP_425799.3| PREDICTED: POU domain, class 2, transcription factor 3 [Gallus
gallus]
Length = 489
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 339 RTSIETNIRS---------TLEKRFQDNPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQK 389
Query: 67 EKRLSV 72
EKR+S
Sbjct: 390 EKRISC 395
>gi|449267410|gb|EMC78355.1| POU domain, class 2, transcription factor 3, partial [Columba
livia]
Length = 428
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 278 RTSIETNIRS---------TLEKRFQDNPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQK 328
Query: 67 EKRLSV 72
EKR+S
Sbjct: 329 EKRISC 334
>gi|397525440|ref|XP_003832677.1| PREDICTED: homeobox protein Nkx-6.1 [Pan paniscus]
Length = 256
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 114 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 173
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 174 QNRRTKWRKKHAAEMATAKKKQD 196
>gi|328723432|ref|XP_003247845.1| PREDICTED: homeobox protein MOX-2-like [Acyrthosiphon pisum]
Length = 189
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR--LSVDEAFV 77
T Q++ LEK + ++KY + + +VA + LTE QV WF +RR+K KR + EA +
Sbjct: 37 TSQQLLELEKQFRQNKYLSRPKRFEVATNLMLTETQVKIWFQNRRMKWKRSKKAQQEAKI 96
Query: 78 GGRQDRSSGVIQDRGS-GLRQDSCGS 102
R D ++ RG+ +R S GS
Sbjct: 97 SSRDD---TALEKRGTVNIRTCSTGS 119
>gi|255948876|ref|XP_002565205.1| Pc22g12610 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592222|emb|CAP98549.1| Pc22g12610 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 601
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+KN KR+ T Q++ LE +N++ PT + ++A I +TE+ V WF +RR K K L
Sbjct: 57 QKNNKRQRATQDQLVLLEIEFNKNPTPTAATRERIASDINMTERSVQIWFQNRRAKIKML 116
Query: 71 S 71
+
Sbjct: 117 A 117
>gi|444725260|gb|ELW65833.1| POU domain, class 2, transcription factor 3, partial [Tupaia
chinensis]
Length = 340
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 231 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 281
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 282 EKRINCPVA 290
>gi|330793838|ref|XP_003284989.1| hypothetical protein DICPUDRAFT_96898 [Dictyostelium purpureum]
gi|325085110|gb|EGC38524.1| hypothetical protein DICPUDRAFT_96898 [Dictyostelium purpureum]
Length = 419
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR+ +P Q+ LEK + H++P ++SQ+A ++ +T + V WF +RR K + +
Sbjct: 131 KRKRTSPDQLKLLEKIFLAHQHPNLNLRSQLAVELQMTARSVQIWFQNRRAKARNM 186
>gi|395854359|ref|XP_003799663.1| PREDICTED: uncharacterized protein LOC100943073 [Otolemur
garnettii]
Length = 217
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
+R T Q LEK + +KYPT E + +AE++ L E QV WF +RR KE R + +
Sbjct: 23 ERTVYTKEQQNKLEKHFKMNKYPTHEERQILAERLNLQEHQVQVWFKNRRAKESRQQLRQ 82
Query: 75 AFVGGRQDRSSGVIQDRGS 93
G Q S G R S
Sbjct: 83 LSGGHGQGASVGPTLPRAS 101
>gi|126291631|ref|XP_001381098.1| PREDICTED: homeobox protein EMX1-like [Monodelphis domestica]
Length = 290
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 1 MHSEENKVSL------EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEK 54
+HS EN + K I+ + +P+Q++ LE+ + ++ Y + Q+A + LTE
Sbjct: 176 IHSAENLMLCGPFTRKPKRIRTAF-SPSQLLRLERAFEKNHYVVGAERKQLANSLCLTET 234
Query: 55 QVSGWFCHRRLKEKRLSVDEAFVGGRQDRSSGVIQ 89
QV WF +RR K KR +DE + R G ++
Sbjct: 235 QVKVWFQNRRTKHKRQKMDEECPTAEEKRKPGQLK 269
>gi|348567312|ref|XP_003469444.1| PREDICTED: homeobox protein Nkx-6.1-like [Cavia porcellus]
Length = 223
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 3 SEENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
+++ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV
Sbjct: 83 TDQGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKV 142
Query: 59 WFCHRRLK-EKRLSVDEAFVGGRQD 82
WF +RR K K+ + + A +QD
Sbjct: 143 WFQNRRTKWRKKHAAEMATAKKKQD 167
>gi|405952348|gb|EKC20170.1| POU domain, class 2, transcription factor 1 [Crassostrea gigas]
Length = 507
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + ++ P+ E + VA+Q+ + ++ V WFC+RR K
Sbjct: 334 RTSIETNIR---------VALEKSFQQNPKPSSEEITSVADQLSMEKEVVRVWFCNRRQK 384
Query: 67 EKRL 70
+KR+
Sbjct: 385 QKRI 388
>gi|395520114|ref|XP_003764182.1| PREDICTED: POU domain, class 2, transcription factor 3 [Sarcophilus
harrisii]
Length = 437
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 288 RTSIETNIR---------LTLEKRFQDNPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQK 338
Query: 67 EKRL 70
EKR+
Sbjct: 339 EKRI 342
>gi|340712792|ref|XP_003394939.1| PREDICTED: hypothetical protein LOC100644394 isoform 1 [Bombus
terrestris]
Length = 555
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQV-----MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQV 56
+S N ++ + I RR K + +ALEK + ++ PT E + +A+ + + ++ V
Sbjct: 406 NSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEITVLADTLAMEKEVV 465
Query: 57 SGWFCHRRLKEKRLSVDEAFVG 78
WFC+RR KEKR++ A +G
Sbjct: 466 RVWFCNRRQKEKRINPPTAAMG 487
>gi|383847571|ref|XP_003699426.1| PREDICTED: uncharacterized protein LOC100875025 [Megachile
rotundata]
Length = 516
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQV-----MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQV 56
+S N ++ + I RR K + +ALEK + ++ PT E + +A+ + + ++ V
Sbjct: 367 NSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFMQNPKPTSEEITVLADSLAMEKEVV 426
Query: 57 SGWFCHRRLKEKRLSVDEAFVG 78
WFC+RR KEKR++ A +G
Sbjct: 427 RVWFCNRRQKEKRINPPTAAMG 448
>gi|357617807|gb|EHJ71004.1| maxillopedia [Danaus plexippus]
Length = 548
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 51 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 110
Query: 68 KRLSVDEAFVGGRQDRSS 85
KR ++ ++ G +D ++
Sbjct: 111 KRQTLSKSEDGDDKDSTT 128
>gi|347972357|ref|XP_001688961.2| AGAP004648-PA [Anopheles gambiae str. PEST]
gi|333469403|gb|EDO63635.2| AGAP004648-PA [Anopheles gambiae str. PEST]
Length = 789
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 180 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 239
Query: 68 KRLSV-----DEAF---VGGRQDRSSGVIQDRGSGLRQDSC 100
KR ++ DE+ + G ++ G++ D S C
Sbjct: 240 KRQTLSKTDDDESGKDDLKGEHEQLIGIVSDSNSKKSCQGC 280
>gi|296221502|ref|XP_002807522.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.2
[Callithrix jacchus]
Length = 278
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 142 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 201
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDY-RSIDPR---EVQSRM 120
K KR + + A +QD + ++ GS D +Y R +DP E SR+
Sbjct: 202 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDD-------EYNRPLDPNSDDEKISRL 254
Query: 121 LYCH 124
L H
Sbjct: 255 LKKH 258
>gi|42543138|pdb|1O4X|A Chain A, Ternary Complex Of The Dna Binding Domains Of The Oct1 And
Sox2 Transcription Factors With A 19mer Oligonucleotide
From The Hoxb1 Regulatory Element
Length = 167
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 9/65 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 108 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 158
Query: 67 EKRLS 71
EKR++
Sbjct: 159 EKRIN 163
>gi|405976604|gb|EKC41105.1| Homeobox protein Hox-B7 [Crassostrea gigas]
Length = 208
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+V+ E+ R+ T Q + LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K
Sbjct: 109 EVTYEQKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHLLGLTERQIKIWFQNRRMK 168
Query: 67 EKR 69
K+
Sbjct: 169 WKK 171
>gi|432877585|ref|XP_004073172.1| PREDICTED: homeobox protein CDX-4-like [Oryzias latipes]
Length = 274
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK ++ ++Y T KS++A +GL+E+QV WF +RR KE++L + G+ D
Sbjct: 165 QRLELEKEFHFNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKLIKKKL---GQSD 221
Query: 83 RSSGVIQ-DRGS 93
SSG + D GS
Sbjct: 222 GSSGSVHSDPGS 233
>gi|256076189|ref|XP_002574396.1| gsx family homeobox protein [Schistosoma mansoni]
Length = 498
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+R T Q+ LEK + H Y T + ++A + LTE+QV WF +RR+K KR+
Sbjct: 423 ERTAFTKHQICELEKEFTTHSYLTRLRRYEIAVALNLTERQVKVWFQNRRMKFKRM 478
>gi|158936914|dbj|BAF91572.1| Msx protein [Scolionema suvaense]
Length = 307
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 16 RRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
R+ +TP +Q++ LE+ + +Y + +S+++EQ+ LTE Q+ WF +RR KEKRL
Sbjct: 200 RKPRTPFSASQLLTLEQKFKRKQYLSISERSELSEQLKLTETQIKIWFQNRRAKEKRL 257
>gi|172087438|ref|XP_001913261.1| HOX11 [Oikopleura dioica]
gi|42601388|gb|AAS21413.1| HOX11 [Oikopleura dioica]
gi|313239324|emb|CBY14270.1| unnamed protein product [Oikopleura dioica]
Length = 292
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KRR T Q+ LEK Y Y E + ++ +++ L+++QV WF +RR+KEK+L
Sbjct: 210 KRRPYTKQQIAELEKEYMSSTYIAREKRQELGDRLNLSDRQVKVWFQNRRMKEKKL 265
>gi|198427480|ref|XP_002121214.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 291
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 14 IKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
I RR T Q++ L+K ++ Y T ++ +A+++ LTE Q+ WF +RR KEKR
Sbjct: 171 IGRRLFTGFQILELDKAFSIKPYLTRSERALLAQKVNLTECQIKTWFQNRRTKEKR 226
>gi|91080429|ref|XP_968439.1| PREDICTED: similar to AGAP009500-PA [Tribolium castaneum]
Length = 578
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 6 NKVSLEKNIKRRYKTPAQV-----MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
N ++ + I RR K + +ALEK + ++ PT E S +A+ + + ++ V WF
Sbjct: 457 NPMTTPETIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEISMLADGLCMEKEVVRVWF 516
Query: 61 CHRRLKEKRLSVDEAFVG 78
C+RR KEKR++ A +G
Sbjct: 517 CNRRQKEKRINPPAAAMG 534
>gi|358334415|dbj|GAA52858.1| homeotic protein labial, partial [Clonorchis sinensis]
Length = 678
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAF 76
T Q+ LEK ++ ++Y T + ++A +GLTE QV WF +RR+K+K+ D+ F
Sbjct: 587 TNKQLTELEKEFHFNRYLTRARRIEIANDLGLTETQVKIWFQNRRMKQKKRMRDQWF 643
>gi|224083296|ref|XP_002191006.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Taeniopygia guttata]
Length = 230
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 80 RTSIETNIRS---------TLEKRFQDNPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQK 130
Query: 67 EKRLSV 72
EKR+S
Sbjct: 131 EKRISC 136
>gi|426201284|gb|EKV51207.1| hypothetical protein AGABI2DRAFT_189484 [Agaricus bisporus var.
bisporus H97]
Length = 490
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 39/56 (69%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
R +PAQ+ AL + ++++++P+ E++S +A+++G+ K V+ WF ++R K+ S
Sbjct: 22 RHRHSPAQLAALNELFDKNEHPSLELRSALADRLGMETKTVNAWFQNKRASTKKRS 77
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
+P Q+ L K Y + +P+ E + +AE+IG+ + ++ WF ++R K+ DE+
Sbjct: 161 SPDQIEELRKLYAINPHPSAEERQVIAERIGMRYQSITNWFQNQRSLAKKRREDES 216
>gi|384081143|dbj|BAM11007.1| POU domain class 2 transcription factor 1, partial [Buergeria
buergeri]
Length = 306
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 25 MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+ALEK + E+ PT E + +A+Q+ + ++ + WFC+RR KEKR+
Sbjct: 4 VALEKSFLENPKPTSEEITMIADQLHMEKEVIRVWFCNRRQKEKRI 49
>gi|11225250|gb|AAG33015.1|AF308821_1 Mnx homeodomain protein [Branchiostoma floridae]
Length = 296
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T Q++ LEK++ E+KY + + +VA + LTE QV WF +RR+K KR
Sbjct: 163 TSQQLLELEKYFKENKYLSRPKRFEVATALMLTETQVKIWFQNRRMKWKR 212
>gi|2058330|emb|CAA73198.1| Oct-2 alpha transcription factor [Ictalurus punctatus]
Length = 446
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E N++ +ALE+ ++ ++ PT E +AEQ+ + ++ + WFC+RR K
Sbjct: 303 RTSIETNVR---------VALERTFSTNQKPTSEEILLIAEQLNMEKEVIRVWFCNRRQK 353
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 354 EKRINPSSA 362
>gi|400180336|gb|AFP73303.1| Hoxa9beta [Polyodon spathula]
Length = 257
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVD 73
KR T Q + LEK + + Y T E + +VA Q+ LTE+QV WF +RR+K K+++ D
Sbjct: 194 KRCPYTKHQTLELEKEFLFNMYLTRERRHEVARQLNLTERQVKIWFQNRRMKMKKINKD 252
>gi|443717297|gb|ELU08448.1| hypothetical protein CAPTEDRAFT_88304, partial [Capitella teleta]
Length = 59
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 17 RYKTPAQVMALEKFYNEH---KYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
R+ P+ V + K+YN+H YPTE+ K+ +A++ GLT QV+ WF ++R
Sbjct: 4 RFLDPSAVDHMNKWYNDHIAYPYPTEDEKNTIAKEAGLTVAQVTCWFANKR 54
>gi|297485260|ref|XP_002694927.1| PREDICTED: homeobox protein Nkx-6.2 [Bos taurus]
gi|296478155|tpg|DAA20270.1| TPA: NK6 transcription factor related, locus 2-like [Bos taurus]
Length = 334
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 199 LDKDGKKKHSRPTFSGQQTFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 258
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDY-RSIDPR---EVQSRM 120
K KR + + A +QD + ++ GS D +Y R +DP E +R+
Sbjct: 259 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDD-------EYNRPLDPNWDDEKITRL 311
Query: 121 LYCHDFPATDLA 132
L H P LA
Sbjct: 312 LKKHRAPNLALA 323
>gi|148688314|gb|EDL20261.1| NK6 transcription factor related, locus 1 (Drosophila) [Mus
musculus]
Length = 262
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 123 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 182
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 183 QNRRTKWRKKHAAEMATAKKKQD 205
>gi|321455195|gb|EFX66335.1| putative transcriptional factor muscle segment homeobox protein
[Daphnia pulex]
Length = 555
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 16 RRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
R+ +TP Q+MALEK + E +Y + +++ + + LTE QV WF +RR K KRL
Sbjct: 371 RKPRTPFTTQQLMALEKKFREKQYLSIAERAEFSASLSLTETQVKIWFQNRRAKAKRL 428
>gi|195110435|ref|XP_001999785.1| GI24721 [Drosophila mojavensis]
gi|193916379|gb|EDW15246.1| GI24721 [Drosophila mojavensis]
Length = 773
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 172 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 231
Query: 68 KRLSV 72
KR ++
Sbjct: 232 KRQTL 236
>gi|326933281|ref|XP_003212735.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Meleagris gallopavo]
Length = 539
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 389 RTSIETNIRS---------TLEKRFQDNPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQK 439
Query: 67 EKRLSV 72
EKR+S
Sbjct: 440 EKRISC 445
>gi|158702355|gb|ABW77543.1| homeobox protein HoxC11bb [Salmo salar]
Length = 308
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 6 NKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
NK S KR T Q+ LE+ + + Y +E + Q++ + LT++QV WF +RR+
Sbjct: 230 NKTSHSSRKKRCPYTKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRM 289
Query: 66 KEKRLSVD 73
KEK+LS D
Sbjct: 290 KEKKLSRD 297
>gi|321475850|gb|EFX86812.1| putative homeotic Proboscipedia protein [Daphnia pulex]
Length = 887
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 10 LEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
L + + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 174 LNEGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMK 233
Query: 67 EKRLSV 72
KR ++
Sbjct: 234 HKRQAL 239
>gi|270006396|gb|EFA02844.1| nubbin [Tribolium castaneum]
Length = 543
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 6 NKVSLEKNIKRRYKTPAQV-----MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
N ++ + I RR K + +ALEK + ++ PT E S +A+ + + ++ V WF
Sbjct: 422 NPMTTPETIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEISMLADGLCMEKEVVRVWF 481
Query: 61 CHRRLKEKRLSVDEAFVG 78
C+RR KEKR++ A +G
Sbjct: 482 CNRRQKEKRINPPAAAMG 499
>gi|260794346|ref|XP_002592170.1| motor neuron homeobox [Branchiostoma floridae]
gi|229277385|gb|EEN48181.1| motor neuron homeobox [Branchiostoma floridae]
Length = 296
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T Q++ LEK++ E+KY + + +VA + LTE QV WF +RR+K KR
Sbjct: 163 TSQQLLELEKYFKENKYLSRPKRFEVATALMLTETQVKIWFQNRRMKWKR 212
>gi|194899125|ref|XP_001979113.1| GG10269 [Drosophila erecta]
gi|190650816|gb|EDV48071.1| GG10269 [Drosophila erecta]
Length = 811
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 218 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 277
Query: 68 KRLSV 72
KR ++
Sbjct: 278 KRQTL 282
>gi|313245942|emb|CBY34920.1| unnamed protein product [Oikopleura dioica]
Length = 268
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KRR T Q+ LEK Y Y E + ++ +++ L+++QV WF +RR+KEK+L
Sbjct: 186 KRRPYTKQQIAELEKEYMSSTYIAREKRQELGDRLNLSDRQVKVWFQNRRMKEKKL 241
>gi|60678587|gb|AAX33663.1| Dbuz\pb-PD [Drosophila buzzatii]
Length = 753
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 160 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 219
Query: 68 KRLSV 72
KR ++
Sbjct: 220 KRQTL 224
>gi|45553267|ref|NP_996161.1| proboscipedia, isoform D [Drosophila melanogaster]
gi|45446402|gb|AAS65118.1| proboscipedia, isoform D [Drosophila melanogaster]
Length = 772
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 184 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 243
Query: 68 KRLSV 72
KR ++
Sbjct: 244 KRQTL 248
>gi|195344053|ref|XP_002038605.1| GM10530 [Drosophila sechellia]
gi|194133626|gb|EDW55142.1| GM10530 [Drosophila sechellia]
Length = 833
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 241 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 300
Query: 68 KRLSV 72
KR ++
Sbjct: 301 KRQTL 305
>gi|195038435|ref|XP_001990663.1| GH19484 [Drosophila grimshawi]
gi|193894859|gb|EDV93725.1| GH19484 [Drosophila grimshawi]
Length = 787
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 164 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 223
Query: 68 KRLSV 72
KR ++
Sbjct: 224 KRQTL 228
>gi|170034364|ref|XP_001845044.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167875677|gb|EDS39060.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 202
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
TP Q +LE+ ++ HKY + E + +A Q+ L+++QV WF +RR K +R
Sbjct: 63 TPQQTQSLERRFSNHKYLSPEDRRHLAVQLKLSDRQVKTWFQNRRAKWRR 112
>gi|60678584|gb|AAX33660.1| Dbuz\pb-PA [Drosophila buzzatii]
Length = 763
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 170 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 229
Query: 68 KRLSV 72
KR ++
Sbjct: 230 KRQTL 234
>gi|256070808|ref|XP_002571734.1| hox protein Smox1 [Schistosoma mansoni]
Length = 745
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
+S+++ R+ T Q + LEK ++ +KY T + ++A + LTE+Q+ WF +RR+K
Sbjct: 572 ISVDQKRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHTLTLTERQIKIWFQNRRMKW 631
Query: 68 KR 69
K+
Sbjct: 632 KK 633
>gi|48476635|gb|AAT44520.1| proboscipedia [Oncopeltus fasciatus]
Length = 470
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 5 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 64
Query: 68 KRLSVDEAFVGGRQDRSSGVIQ-DRGSGLRQDS 99
KR ++ + G + SG + D+G L +S
Sbjct: 65 KRQTLSKQSEDGDEKEGSGKSKSDKGLLLHDES 97
>gi|60172784|gb|AAX14497.1| hox protein Smox1 [Schistosoma mansoni]
Length = 745
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
+S+++ R+ T Q + LEK ++ +KY T + ++A + LTE+Q+ WF +RR+K
Sbjct: 572 ISVDQKRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHTLTLTERQIKIWFQNRRMKW 631
Query: 68 KR 69
K+
Sbjct: 632 KK 633
>gi|195568805|ref|XP_002102404.1| GD19525 [Drosophila simulans]
gi|194198331|gb|EDX11907.1| GD19525 [Drosophila simulans]
Length = 789
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 197 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 256
Query: 68 KRLSV 72
KR ++
Sbjct: 257 KRQTL 261
>gi|60678585|gb|AAX33661.1| Dbuz\pb-PC [Drosophila buzzatii]
Length = 758
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 165 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 224
Query: 68 KRLSV 72
KR ++
Sbjct: 225 KRQTL 229
>gi|255742442|gb|ACU32556.1| homeobox protein HoxB2 [Callorhinchus milii]
Length = 362
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+HS+++ S + ++ Y T Q++ LEK ++ +KY + ++A + LTE+QV WF
Sbjct: 127 VHSDQDNSSGCRRLRTAY-TNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWF 185
Query: 61 CHRRLKEKR 69
+RR+K KR
Sbjct: 186 QNRRMKHKR 194
>gi|520612|emb|CAA84516.1| Hox-4 homeodomain protein [Branchiostoma floridae]
gi|745776|prf||2016458C Hox-4 gene
Length = 105
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T QV+ LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K K+
Sbjct: 17 TRQQVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 66
>gi|7599|emb|CAA45272.1| proboscipedia [Drosophila melanogaster]
gi|8376|emb|CAA45271.1| proboscipedia [Drosophila melanogaster]
gi|248601|gb|AAA08526.1| proboscipedia [Drosophila melanogaster]
Length = 798
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 194 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 253
Query: 68 KRLSV 72
KR ++
Sbjct: 254 KRQTL 258
>gi|195152087|ref|XP_002016968.1| GL22046 [Drosophila persimilis]
gi|194112025|gb|EDW34068.1| GL22046 [Drosophila persimilis]
Length = 797
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 186 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 245
Query: 68 KRLSV 72
KR ++
Sbjct: 246 KRQTL 250
>gi|45549028|ref|NP_476669.3| proboscipedia, isoform A [Drosophila melanogaster]
gi|32470599|sp|P31264.2|HMPB_DROME RecName: Full=Homeotic protein proboscipedia
gi|4389432|gb|AAD19802.1| homeodomain protein [Drosophila melanogaster]
gi|45446405|gb|AAF54089.3| proboscipedia, isoform A [Drosophila melanogaster]
Length = 782
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 194 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 253
Query: 68 KRLSV 72
KR ++
Sbjct: 254 KRQTL 258
>gi|45553271|ref|NP_996162.1| proboscipedia, isoform C [Drosophila melanogaster]
gi|45446403|gb|AAS65119.1| proboscipedia, isoform C [Drosophila melanogaster]
Length = 777
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 189 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 248
Query: 68 KRLSV 72
KR ++
Sbjct: 249 KRQTL 253
>gi|402911273|ref|XP_003918261.1| PREDICTED: rhox homeobox family member 1 [Papio anubis]
Length = 185
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 9 SLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
+++ I+R+ TP QV LE + +YP + ++AE +G+TE +V WF ++R + K
Sbjct: 99 NMQPRIRRKKFTPLQVQELESVFQRTQYPDVPTRRELAENLGVTEDKVRVWFKNKRARCK 158
Query: 69 R 69
R
Sbjct: 159 R 159
>gi|198453492|ref|XP_002137681.1| pb, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132379|gb|EDY68239.1| pb, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 801
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 186 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 245
Query: 68 KRLSV 72
KR ++
Sbjct: 246 KRQTL 250
>gi|397911068|gb|AFO68810.1| homeodomain-containing protein Hox6, partial [Branchiostoma
lanceolatum]
Length = 144
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 3 SEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCH 62
S + + EK R+ T Q + LEK ++ +KY T + + ++A +GLTE+Q+ WF +
Sbjct: 42 SSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGLTERQIKIWFQN 101
Query: 63 RRLKEKR 69
RR+K K+
Sbjct: 102 RRMKWKK 108
>gi|390178659|ref|XP_003736700.1| pb, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859536|gb|EIM52773.1| pb, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 796
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 181 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 240
Query: 68 KRLSV 72
KR ++
Sbjct: 241 KRQTL 245
>gi|363733401|ref|XP_003641244.1| PREDICTED: uncharacterized protein LOC395752, partial [Gallus
gallus]
Length = 557
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 444 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 503
Query: 61 CHRRLKEKRLSVDE 74
+RR K ++ E
Sbjct: 504 QNRRTKWRKKHAAE 517
>gi|360043143|emb|CCD78555.1| hox protein Smox1 [Schistosoma mansoni]
Length = 842
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
+S+++ R+ T Q + LEK ++ +KY T + ++A + LTE+Q+ WF +RR+K
Sbjct: 572 ISVDQKRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHTLTLTERQIKIWFQNRRMKW 631
Query: 68 KR 69
K+
Sbjct: 632 KK 633
>gi|118343828|ref|NP_001071736.1| transcription factor protein [Ciona intestinalis]
gi|70569892|dbj|BAE06497.1| transcription factor protein [Ciona intestinalis]
Length = 484
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 35/48 (72%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q+ LE+ + +++ + EM+ Q+A ++GL ++QV WF +RR+K+KR+
Sbjct: 401 QLSELEREFGANEFISREMREQIAVRVGLNDRQVKIWFQNRRMKKKRM 448
>gi|312081258|ref|XP_003142951.1| hypothetical protein LOAG_07370 [Loa loa]
gi|307761884|gb|EFO21118.1| hypothetical protein LOAG_07370 [Loa loa]
Length = 169
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 18 YKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
Y TP QV+ LEK + ++Y ++ ++++A + LT++Q+ WF +RR+KEK+
Sbjct: 6 YSTP-QVVELEKEFRTNRYLNKQRRNELATLLALTDRQIKIWFQNRRMKEKK 56
>gi|157833545|pdb|1POG|A Chain A, Solution Structure Of The Oct-1 Pou-Homeo Domain
Determined By Nmr And Restrained Molecular Dynamics
Length = 67
Score = 46.6 bits (109), Expect = 0.028, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
M + + S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WF
Sbjct: 5 MRRRKKRTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWF 55
Query: 61 CHRRLKEKRLSV 72
C+RR KEKR+ +
Sbjct: 56 CNRRQKEKRIDI 67
>gi|431904020|gb|ELK09455.1| POU domain, class 2, transcription factor 3 [Pteropus alecto]
Length = 714
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 5 ENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
+ + S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR
Sbjct: 305 KKRTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRR 355
Query: 65 LKEKRLSVDEA 75
KEKR++ A
Sbjct: 356 QKEKRINCPVA 366
>gi|324511427|gb|ADY44758.1| Homeobox protein aristaless [Ascaris suum]
Length = 152
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 12 KNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK-- 66
K+ RR +T P Q+ LE + E YP + Q+AE++GL E ++ WF +RR K
Sbjct: 13 KSTGRRERTTFNPMQLQFLESIFKETHYPDVYHREQIAEKVGLQESRIQVWFKNRRAKDR 72
Query: 67 -EKRLSVD 73
+KRL V
Sbjct: 73 QQKRLGVQ 80
>gi|38016601|gb|AAR07634.1| transcription factor Hox1 [Ptychodera flava]
Length = 334
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGG 79
T Q+ LEK ++ +KY T + ++A +GL E QV WF +RR+K+K+ + AF G
Sbjct: 255 TNKQLTELEKEFHFNKYLTRARRVEIAAMLGLNETQVKIWFQNRRMKQKKRYKEPAFGQG 314
>gi|432908467|ref|XP_004077875.1| PREDICTED: homeobox protein Hox-A13b-like [Oryzias latipes]
gi|74267529|dbj|BAE44263.1| hoxA13b [Oryzias latipes]
gi|83016936|dbj|BAE53466.1| hoxA13b [Oryzias latipes]
Length = 289
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR T Q+ LE+ Y +K+ T++ + +++ Q LTE+QV+ WF +RR+KEK++
Sbjct: 226 KRVPYTKVQLKELEREYASNKFITKDKRRRISAQTNLTERQVTIWFQNRRVKEKKI 281
>gi|220830|dbj|BAA02355.1| Oct-1 [Rattus norvegicus]
Length = 154
Score = 46.6 bits (109), Expect = 0.029, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 9/65 (13%)
Query: 5 ENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
+ + S+E NI+ +ALEK + E++ PT E + +AEQ+ + ++ + WFC+RR
Sbjct: 99 KKRTSIETNIR---------VALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRR 149
Query: 65 LKEKR 69
KEKR
Sbjct: 150 QKEKR 154
>gi|354506570|ref|XP_003515333.1| PREDICTED: hypothetical protein LOC100772326 [Cricetulus griseus]
Length = 497
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 4 EENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
++ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV W
Sbjct: 320 DQGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVW 379
Query: 60 FCHRRLKEKR 69
F +RR K ++
Sbjct: 380 FQNRRTKWRK 389
>gi|328778406|ref|XP_394125.4| PREDICTED: hypothetical protein LOC410648 [Apis mellifera]
Length = 682
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
M+S + L + ++ Y T Q++ LEK ++ +KY + ++A + LTE+QV WF
Sbjct: 1 MYSSITQNGLPRRLRTAY-TNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWF 59
Query: 61 CHRRLKEKRLSV 72
+RR+K KR ++
Sbjct: 60 QNRRMKHKRQTL 71
>gi|301128897|emb|CBL59359.1| HoxD11 [Scyliorhinus canicula]
Length = 278
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 6 NKVSLEKNIKRRYK----TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFC 61
+K SL N++ R K T Q+ LE+ + + Y +E + Q++ + LT++QV WF
Sbjct: 196 DKNSLSTNLRCRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQ 255
Query: 62 HRRLKEKRLSVD 73
+RR+KEK+LS D
Sbjct: 256 NRRMKEKKLSRD 267
>gi|195389717|ref|XP_002053521.1| GJ23937 [Drosophila virilis]
gi|194151607|gb|EDW67041.1| GJ23937 [Drosophila virilis]
Length = 780
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 169 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 228
Query: 68 KRLSV 72
KR ++
Sbjct: 229 KRQTL 233
>gi|347965800|ref|XP_321747.5| AGAP001389-PA [Anopheles gambiae str. PEST]
gi|333470347|gb|EAA01406.5| AGAP001389-PA [Anopheles gambiae str. PEST]
Length = 331
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
TP Q +LEK ++ HKY + E + +A Q+ L+++QV WF +RR K +R
Sbjct: 188 TPQQTQSLEKRFSNHKYLSPEDRRNLAIQLKLSDRQVKTWFQNRRAKWRR 237
>gi|328700892|ref|XP_001945225.2| PREDICTED: hypothetical protein LOC100169134 [Acyrthosiphon pisum]
Length = 905
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 4 EENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+E + L + ++ Y T Q++ LEK ++ KY + ++A + LTE+QV WF +R
Sbjct: 202 DEKQNGLPRRLRTAY-TNTQLLELEKEFHFSKYLCRPRRIEIAASLDLTERQVKVWFQNR 260
Query: 64 RLKEKRLSVDE 74
R+K KR ++++
Sbjct: 261 RMKHKRQTINK 271
>gi|350408989|ref|XP_003488574.1| PREDICTED: hypothetical protein LOC100749404 [Bombus impatiens]
Length = 517
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQV-----MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQV 56
+S N ++ + I RR K + +ALEK + ++ PT E + +A+ + + ++ V
Sbjct: 368 NSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEITVLADTLAMEKEVV 427
Query: 57 SGWFCHRRLKEKRLSVDEAFVG 78
WFC+RR KEKR++ A +G
Sbjct: 428 RVWFCNRRQKEKRINPPTAAMG 449
>gi|340370700|ref|XP_003383884.1| PREDICTED: hypothetical protein LOC100631603 [Amphimedon
queenslandica]
gi|184191099|gb|ACC76762.1| Msx [Amphimedon queenslandica]
Length = 380
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q++ALE+ + + +Y + +++ AE + LTE QV WF +RR KEKRL
Sbjct: 211 QLIALERKFRQQRYLSVAERAEFAEYLKLTETQVKIWFQNRRAKEKRL 258
>gi|332692485|gb|AEE90165.1| Homeobox B9a [Anguilla anguilla]
gi|385654476|gb|AFI61977.1| Hox-B9a [Anguilla japonica]
Length = 249
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +V+ Q+ LTE+QV WF +RR+K K+++ D+
Sbjct: 187 KRCPYTKYQTLELEKEFLFNMYLTRDRRHEVSRQLNLTERQVKIWFQNRRMKMKKMNKDQ 246
Query: 75 A 75
A
Sbjct: 247 A 247
>gi|270341325|gb|AAS07616.2| labial homeodomain protein 3 [Perionyx excavatus]
Length = 144
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+ N+ R T Q+ LEK ++ +KY T + ++A +GL E QV WF +RR+K+K+
Sbjct: 49 QSNLGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQVKIWFQNRRMKQKK- 107
Query: 71 SVDEAFVG 78
V E VG
Sbjct: 108 RVKENQVG 115
>gi|358340300|dbj|GAA34699.2| POU domain class 4 transcription factor 2 [Clonorchis sinensis]
Length = 835
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
EK KR T ++ +LE F++ P+ E +Q+AE++ L + V WFC++R K+KR+
Sbjct: 761 EKRRKRTSITDSEKRSLEAFFSVQPRPSSEKIAQIAEKLNLKKNVVRVWFCNQRQKQKRM 820
>gi|195038433|ref|XP_001990662.1| GH18130 [Drosophila grimshawi]
gi|193894858|gb|EDV93724.1| GH18130 [Drosophila grimshawi]
Length = 314
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
R T Q+M LE+ +NE+KY + +++++ LTE+QV WF +RR+K K+L+
Sbjct: 42 RTAFTSHQLMELEREFNENKYLGRPRRIGISQRLLLTERQVKIWFQNRRMKSKKLA 97
>gi|91982989|gb|ABE68632.1| Cnox-5 [Eleutheria dichotoma]
Length = 259
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q++ LEK ++ ++Y T + ++A+ + LTE Q+ WF +RR+K+KR D
Sbjct: 143 KRVCFTQKQIVELEKEFHYNRYLTRARRVEIAQLLKLTEAQIKIWFQNRRMKQKREQKDM 202
Query: 75 A 75
A
Sbjct: 203 A 203
>gi|426232272|ref|XP_004010157.1| PREDICTED: uncharacterized protein LOC554330 [Ovis aries]
Length = 286
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 2 HSEENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVS 57
+++ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV
Sbjct: 139 RADQGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVK 198
Query: 58 GWFCHRRLK-EKRLSVDEAFVGGRQD 82
WF +RR K K+ + + A +QD
Sbjct: 199 VWFQNRRTKWRKKHAAEMATAKKKQD 224
>gi|409048403|gb|EKM57881.1| hypothetical protein PHACADRAFT_182311 [Phanerochaete carnosa
HHB-10118-sp]
Length = 586
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR TP Q++ LE + ++ P ++ +++ Q+G+ E+Q WF +RR KEK+
Sbjct: 52 KRGRVTPEQLVVLEALFADNHSPNAILRKEISGQLGMAERQTQIWFQNRRAKEKQ 106
>gi|328777641|ref|XP_001122806.2| PREDICTED: POU domain, class 2, transcription factor 3-like [Apis
mellifera]
Length = 517
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 3 SEENKVSLEKNIKRRYKTPAQV-----MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVS 57
S N ++ + I RR K + +ALEK + ++ PT E + +A+ + + ++ V
Sbjct: 369 SLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEITVLADSLAMEKEVVR 428
Query: 58 GWFCHRRLKEKRLSVDEAFVG 78
WFC+RR KEKR++ A +G
Sbjct: 429 VWFCNRRQKEKRINPPTAAMG 449
>gi|301760125|ref|XP_002915867.1| PREDICTED: homeobox protein Nkx-6.2-like [Ailuropoda melanoleuca]
Length = 209
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 75 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 134
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQD 98
K KR + + A +QD + ++ GS D
Sbjct: 135 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDD 168
>gi|1772832|gb|AAD10203.1| POU [Gallus gallus]
Length = 154
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 15/87 (17%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 77 RTSIETNIRS---------TLEKRFQDNPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQK 127
Query: 67 EKRLS------VDEAFVGGRQDRSSGV 87
EKR+S + R R SG+
Sbjct: 128 EKRISCPMPSPIKSPIYNSRLVRCSGL 154
>gi|328717639|ref|XP_003246266.1| PREDICTED: homeobox protein MOX-1-like [Acyrthosiphon pisum]
Length = 136
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 5 ENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
EN+ S++ R T Q+ LE + + KY T + +VA +GLTE+QV WF +RR
Sbjct: 64 ENEHSIKSRKSRTAFTKYQLGWLEGEFEKCKYLTRLRRYEVALILGLTERQVKVWFQNRR 123
Query: 65 LKEKRLS 71
+K+KRL+
Sbjct: 124 MKKKRLN 130
>gi|194742038|ref|XP_001953514.1| GF17798 [Drosophila ananassae]
gi|190626551|gb|EDV42075.1| GF17798 [Drosophila ananassae]
Length = 790
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 193 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 252
Query: 68 KRLSV 72
KR ++
Sbjct: 253 KRQTL 257
>gi|324516905|gb|ADY46669.1| Homeobox protein lin-39 [Ascaris suum]
Length = 206
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE-----AFV 77
QV+ LEK ++ +KY T + + ++A + LTE+QV WF +RR+K K+ + D+ F
Sbjct: 123 QVLELEKEFHFNKYLTRKRRIEIAHSLMLTERQVKIWFQNRRMKHKKENKDKPVPSVPFA 182
Query: 78 GG 79
GG
Sbjct: 183 GG 184
>gi|319401869|ref|NP_001187100.1| Oct2 transcription factor [Ictalurus punctatus]
gi|2058332|emb|CAA73199.1| Oct-2 beta transcription factor [Ictalurus punctatus]
Length = 480
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E N++ +ALE+ ++ ++ PT E +AEQ+ + ++ + WFC+RR K
Sbjct: 303 RTSIETNVR---------VALERSFSTNQKPTSEEILLIAEQLNMEKEVIRVWFCNRRQK 353
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 354 EKRINPSSA 362
>gi|400180324|gb|AFP73292.1| Hoxa9alpha [Polyodon spathula]
Length = 254
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVD 73
KR T Q + LEK + + Y T + + QVA Q+ LTE+QV WF +RR+K K+++ D
Sbjct: 191 KRCPYTKHQTLELEKEFLFNMYLTRDRRYQVARQLSLTERQVKIWFQNRRMKMKKINKD 249
>gi|348533876|ref|XP_003454430.1| PREDICTED: homeobox protein Hox-A13b-like isoform 2 [Oreochromis
niloticus]
Length = 284
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 7 KVSLEKNIKRRYK------TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
K +L+ N RR + T Q+ LE+ Y +K+ T++ + +++ Q LTE+QV+ WF
Sbjct: 207 KSTLQDNSVRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISAQTNLTERQVTIWF 266
Query: 61 CHRRLKEKRL 70
+RR+KEK++
Sbjct: 267 QNRRVKEKKI 276
>gi|340712794|ref|XP_003394940.1| PREDICTED: hypothetical protein LOC100644394 isoform 2 [Bombus
terrestris]
Length = 517
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 3 SEENKVSLEKNIKRRYKTPAQV-----MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVS 57
S N ++ + I RR K + +ALEK + ++ PT E + +A+ + + ++ V
Sbjct: 369 SLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEITVLADTLAMEKEVVR 428
Query: 58 GWFCHRRLKEKRLSVDEAFVG 78
WFC+RR KEKR++ A +G
Sbjct: 429 VWFCNRRQKEKRINPPTAAMG 449
>gi|1147628|gb|AAB48010.1| Cnox5 homeodomain protein [Eleutheria dichotoma]
Length = 259
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q++ LEK ++ ++Y T + ++A+ + LTE Q+ WF +RR+K+KR D
Sbjct: 143 KRVCFTQKQIVELEKEFHYNRYLTRARRVEIAQLLKLTEAQIKIWFQNRRMKQKREQKDM 202
Query: 75 A 75
A
Sbjct: 203 A 203
>gi|380015441|ref|XP_003691710.1| PREDICTED: POU domain, class 2, transcription factor 3-like [Apis
florea]
Length = 514
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 3 SEENKVSLEKNIKRRYKTPAQV-----MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVS 57
S N ++ + I RR K + +ALEK + ++ PT E + +A+ + + ++ V
Sbjct: 366 SLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEITVLADSLAMEKEVVR 425
Query: 58 GWFCHRRLKEKRLSVDEAFVG 78
WFC+RR KEKR++ A +G
Sbjct: 426 VWFCNRRQKEKRINPPTAAMG 446
>gi|307174898|gb|EFN65159.1| POU domain, class 2, transcription factor 1 [Camponotus floridanus]
Length = 512
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQV-----MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQV 56
+S N ++ + I RR K + +ALEK + ++ PT E + +A+ + + ++ V
Sbjct: 363 NSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFIQNPKPTSEEITILADSLAMEKEVV 422
Query: 57 SGWFCHRRLKEKRLSVDEAFVG 78
WFC+RR KEKR++ A +G
Sbjct: 423 RVWFCNRRQKEKRINPPTAAMG 444
>gi|255742469|gb|ACU32581.1| homeobox protein HoxD14 [Callorhinchus milii]
Length = 266
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
+ N +R+ + P Q+ LEK + +++ T E++ ++ ++GLTE+QV WF ++R KE
Sbjct: 190 QVNRQRKKRIPYSKLQITELEKAFENNRFLTPEIRLNISLKLGLTERQVKIWFQNQRQKE 249
Query: 68 KRL 70
K+L
Sbjct: 250 KKL 252
>gi|195341213|ref|XP_002037205.1| GM12794 [Drosophila sechellia]
gi|194131321|gb|EDW53364.1| GM12794 [Drosophila sechellia]
Length = 533
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 13/84 (15%)
Query: 16 RRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV 72
R+ +TP Q+++LEK + E +Y + +++ + + LTE QV WF +RR K KRL
Sbjct: 409 RKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKAKRLQ- 467
Query: 73 DEAFVGGRQDRSSGVIQDRGSGLR 96
GGR DR QD G+G R
Sbjct: 468 -----GGR-DRED---QDGGAGPR 482
>gi|410905841|ref|XP_003966400.1| PREDICTED: POU domain, class 2, transcription factor 2-like
[Takifugu rubripes]
Length = 613
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E N++ +ALE+ + ++ PT E +AEQ+ + ++ + WFC+RR K
Sbjct: 305 RTSIETNVR---------VALERAFMTNQKPTSEEIMLIAEQLNMEKEVIRVWFCNRRQK 355
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 356 EKRINPSSA 364
>gi|410910758|ref|XP_003968857.1| PREDICTED: POU domain, class 2, transcription factor 2-like
[Takifugu rubripes]
Length = 435
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E N++ + LE+ +N ++ PT E +AEQ+ + ++ + WFC+RR K
Sbjct: 333 RTSIETNVR---------VVLERNFNTNQKPTSEEILMLAEQLNMEKEVIRVWFCNRRQK 383
Query: 67 EKRLSVDEAFVGGRQDRSSGVIQDRGS 93
EKR++ + ++S V+ + S
Sbjct: 384 EKRINPSSSTTPPLPSQTSPVVTHKAS 410
>gi|355687280|gb|EHH25864.1| hypothetical protein EGK_15714 [Macaca mulatta]
Length = 217
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 76 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 135
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 136 QNRRTKWRKKHAAEMATAKKKQD 158
>gi|410957299|ref|XP_003985267.1| PREDICTED: homeobox protein Nkx-6.1 [Felis catus]
Length = 417
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 206 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 265
Query: 61 CHRRLKEKR 69
+RR K ++
Sbjct: 266 QNRRTKWRK 274
>gi|259013414|ref|NP_001158414.1| homeobox 11/13b [Saccoglossus kowalevskii]
gi|116574510|gb|ABK00023.1| hox 11/13b [Saccoglossus kowalevskii]
Length = 228
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 36/52 (69%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
T Q+ LE+ + + Y T E ++++++Q+ L+E+Q+ WF +RR+K K+++
Sbjct: 161 TKMQIFELEQAFQNNMYLTRERRTKLSQQLSLSERQIKIWFQNRRMKLKKMT 212
>gi|334191630|gb|AEG66930.1| POU domian transcription factor Polynem [Hydractinia echinata]
Length = 426
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 26 ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFV 77
LE ++ +H+ P+ +++A Q+ L ++ V WFC+RR KEKRL FV
Sbjct: 327 TLEMYFIKHQKPSGHDITEIAMQLNLEKEVVRVWFCNRRQKEKRLLASTGFV 378
>gi|440902176|gb|ELR53000.1| Homeobox protein Nkx-6.2, partial [Bos grunniens mutus]
Length = 183
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 51 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 110
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCH 124
K KR + + A +QD + ++ GS D + D S D E +R+L H
Sbjct: 111 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDDEYNRPLDPNSDD--EKITRLLKKH 168
Query: 125 DFPATDL 131
P L
Sbjct: 169 RAPNLAL 175
>gi|345482709|ref|XP_001608197.2| PREDICTED: homeobox protein Nkx-6.2-like [Nasonia vitripennis]
Length = 428
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK-EKRLSVDEAFVGGRQ 81
Q+ ALEK + + KY ++++A +G+TE QV WF +RR K K+ + + A RQ
Sbjct: 312 QIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKVWFQNRRTKWRKKHAAEMATAKRRQ 371
Query: 82 DRSSGVIQDRGSGLRQDSC 100
+ GV+ G +D C
Sbjct: 372 EEVEGVV-----GEAEDGC 385
>gi|348533874|ref|XP_003454429.1| PREDICTED: homeobox protein Hox-A13b-like isoform 1 [Oreochromis
niloticus]
gi|154183803|gb|ABS70745.1| Hoxa13b [Haplochromis burtoni]
Length = 290
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR T Q+ LE+ Y +K+ T++ + +++ Q LTE+QV+ WF +RR+KEK++
Sbjct: 227 KRVPYTKVQLKELEREYATNKFITKDKRRRISAQTNLTERQVTIWFQNRRVKEKKI 282
>gi|38016605|gb|AAR07636.1| transcription factor Hox5 [Ptychodera flava]
Length = 238
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
MH +E R T Q + LEK ++ ++Y T + ++A +GL+E+Q+ WF
Sbjct: 140 MHMSSGANGMEAKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWF 199
Query: 61 CHRRLKEKR 69
+RR+K K+
Sbjct: 200 QNRRMKWKK 208
>gi|406697718|gb|EKD00973.1| LIM-homeobox protein [Trichosporon asahii var. asahii CBS 8904]
Length = 750
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
RR TP Q+ LE ++N + P +++ +A Q+G+T++ V WF +RR K K
Sbjct: 146 RRRTTPEQLRVLEHWFNINPRPDNQVREWLAGQLGITKRNVQVWFQNRRAKIK 198
>gi|640338|pdb|1OCT|C Chain C, Crystal Structure Of The Oct-1 Pou Domain Bound To An
Octamer Site: Dna Recognition With Tethered Dna-Binding
Modules
Length = 156
Score = 46.2 bits (108), Expect = 0.036, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 9/67 (13%)
Query: 5 ENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
+ + S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR
Sbjct: 98 KKRTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRR 148
Query: 65 LKEKRLS 71
KEKR++
Sbjct: 149 QKEKRIN 155
>gi|391342701|ref|XP_003745654.1| PREDICTED: uncharacterized protein LOC100904958 [Metaseiulus
occidentalis]
Length = 1159
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 9 SLEKNIKRRYKTPAQV-MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
S+ + K+R + V +ALE+ + + PT E + +A+++ + ++ V WFC+RR KE
Sbjct: 1023 SICRRRKKRTSIESAVRVALERAFLLNSKPTSEEIAALADRLAMEKEVVRVWFCNRRQKE 1082
Query: 68 KRLSVDEAFVGGRQDRSSGVIQ 89
KR++ A GG + V++
Sbjct: 1083 KRINPSLALQGGPSSPPANVVK 1104
>gi|56791852|gb|AAW30427.1| Cdx3, partial [Oikopleura dioica]
Length = 125
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 22 AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
Q + LEK + +KY T + K ++++Q+ LTE+QV WF +RR KE+++S
Sbjct: 48 TQRLELEKEFAFNKYITIQRKGELSQQLNLTERQVKIWFQNRRAKERKIS 97
>gi|242009481|ref|XP_002425514.1| Homeobox protein Nkx-6.1, putative [Pediculus humanus corporis]
gi|212509369|gb|EEB12776.1| Homeobox protein Nkx-6.1, putative [Pediculus humanus corporis]
Length = 447
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
R +P+Q++ LE + ++ Y + Q+A+ + LTE QV WF +RR K KR+ +E
Sbjct: 332 RTAFSPSQLLKLEHAFEKNHYVVGAERKQLAQSLSLTETQVKVWFQNRRTKHKRMQQEE 390
>gi|259013466|ref|NP_001158476.1| NK3 homeobox 2-like [Saccoglossus kowalevskii]
gi|197734645|gb|ACH73218.1| bagpipe-like homeobox protein [Saccoglossus kowalevskii]
Length = 272
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 1 MHSEENKVSLEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVS 57
+ SEE+++ K K+R + AQV LE+ +N +Y + ++ +A + LTE+Q+
Sbjct: 127 LKSEEHQLQTPKQRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAIALKLTEQQIK 186
Query: 58 GWFCHRRLKEKRLSVDEA 75
WF +RR K KR + A
Sbjct: 187 IWFQNRRYKTKRRQLQAA 204
>gi|195454819|ref|XP_002074420.1| GK10592 [Drosophila willistoni]
gi|194170505|gb|EDW85406.1| GK10592 [Drosophila willistoni]
Length = 499
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 3 SEENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
S ++ S +K+ K+++ P Q+ ALEK + + KY ++++A +G++E QV
Sbjct: 369 SHQHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKV 428
Query: 59 WFCHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQS 118
WF +RR K ++ E R+ QD G C T D S+D E +
Sbjct: 429 WFQNRRTKWRKRHAAEMATAKRK-------QDDMGGDNDGDCSETMDSDNESLDMGETPA 481
Query: 119 RMLYC 123
+ C
Sbjct: 482 QSKRC 486
>gi|172087274|ref|XP_001913179.1| Hox10 [Oikopleura dioica]
gi|48994287|gb|AAT47861.1| Hox10 [Oikopleura dioica]
gi|313230051|emb|CBY07755.1| unnamed protein product [Oikopleura dioica]
gi|313245905|emb|CBY34887.1| unnamed protein product [Oikopleura dioica]
Length = 312
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%)
Query: 6 NKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
N ++ + KR T Q++ LEK ++ ++Y + E + +VA+ +GLT++QV WF +RR+
Sbjct: 181 NWLTAQGRKKRVPYTKFQLLELEKEFHFNQYLSRERRLEVAKNVGLTDRQVKIWFQNRRM 240
Query: 66 KEKR 69
K K+
Sbjct: 241 KWKK 244
>gi|397911062|gb|AFO68807.1| homeodomain-containing protein Hox4, partial [Branchiostoma
lanceolatum]
Length = 262
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
QV+ LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K K+
Sbjct: 175 QVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 221
>gi|217035826|gb|ACJ74383.1| Hox4 [Branchiostoma lanceolatum]
Length = 278
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
QV+ LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K K+
Sbjct: 185 QVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 231
>gi|195402191|ref|XP_002059690.1| GJ13300 [Drosophila virilis]
gi|194155904|gb|EDW71088.1| GJ13300 [Drosophila virilis]
gi|263359635|gb|ACY70471.1| hypothetical protein DVIR88_6g0008 [Drosophila virilis]
Length = 549
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 7 KVSLEKNIKRRYK--TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
++ L++ ++R T Q+ +LEK + YP + ++AE+IGL E ++ WF +RR
Sbjct: 259 RLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFSNRR 318
Query: 65 --------LKEKRLSVDEAFVGGRQDRSS 85
L+ +R SVD GG R+S
Sbjct: 319 AKWRREEKLRTQRRSVDNVGGGGNSGRTS 347
>gi|6110592|gb|AAF03888.1|AF187068_1 proboscipedia ortholog [Tribolium castaneum]
Length = 477
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 131 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 190
Query: 68 KRLSV 72
KR ++
Sbjct: 191 KRQTL 195
>gi|440808050|gb|AGC24168.1| Phox2 [Aplysia californica]
Length = 329
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 2 HSEENKVSLEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
H ++ VS EK +RR +T AQ+ LEK + E YP + ++A + LTE +V
Sbjct: 122 HGHDSSVSPEKRKQRRIRTTFTSAQLKELEKAFAETHYPDIYTREEIAMKTDLTEARVQV 181
Query: 59 WFCHRRLKEKRL 70
WF +RR K +++
Sbjct: 182 WFQNRRAKFRKM 193
>gi|7331258|gb|AAF60346.1|AF242303_1 Evx [Herdmania curvata]
Length = 492
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 16 RRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV 72
RRY+T QV LEK ++ Y + + ++A+++GL E + WF +RR+K+KR +
Sbjct: 176 RRYRTAFTREQVACLEKEFHRENYVSRPRRCELAQELGLPETTIKVWFQNRRMKDKRQRM 235
Query: 73 DEAFVGG 79
A+ G
Sbjct: 236 TTAWPLG 242
>gi|405977134|gb|EKC41598.1| Hematopoietically-expressed homeobox protein hhex [Crassostrea
gigas]
Length = 296
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + HKY + + ++A+ + LTE+QV WF +RR K +RL E+ G +Q
Sbjct: 192 QTVELEKKFESHKYLSPPERKRLAKTLQLTERQVKTWFQNRRAKWRRLK-QESPTGEKQG 250
Query: 83 RSSGVIQDR-GSGLRQDS 99
S+ +D+ GS + +DS
Sbjct: 251 ESA---EDKTGSDVAEDS 265
>gi|5002502|dbj|BAA78622.1| AmphiHox4 [Branchiostoma floridae]
Length = 275
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
QV+ LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K K+
Sbjct: 182 QVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 228
>gi|443709131|gb|ELU03930.1| hypothetical protein CAPTEDRAFT_173096 [Capitella teleta]
Length = 217
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
Q+ LEK +N H Y T + ++A + LTE+QV WF +RR+K KR
Sbjct: 130 QIRELEKEFNAHNYLTRLRRYEIAVALDLTERQVKVWFQNRRMKWKR 176
>gi|254692758|dbj|BAH23874.2| transcription factor Hox5 [Balanoglossus misakiensis]
Length = 241
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
MH +E R T Q + LEK ++ ++Y T + ++A +GL+E+Q+ WF
Sbjct: 140 MHMSSGANGMEAKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWF 199
Query: 61 CHRRLKEKR 69
+RR+K K+
Sbjct: 200 QNRRMKWKK 208
>gi|340375686|ref|XP_003386365.1| PREDICTED: hypothetical protein LOC100639860 [Amphimedon
queenslandica]
Length = 457
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 25 MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
+ L ++Y ++ YP+ K Q+AEQ GLT QVS WF +RR +++
Sbjct: 157 VVLRQWYTKNAYPSPREKRQLAEQTGLTTTQVSNWFKNRRQRDR 200
>gi|332020471|gb|EGI60886.1| POU domain, class 2, transcription factor 1 [Acromyrmex echinatior]
Length = 563
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQV-----MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQV 56
+S N ++ + I RR K + +ALEK + ++ PT E + +A+ + + ++ V
Sbjct: 419 NSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKSFIQNPKPTSEEITILADSLAMEKEVV 478
Query: 57 SGWFCHRRLKEKRLSVDEAFVG 78
WFC+RR KEKR++ A +G
Sbjct: 479 RVWFCNRRQKEKRINPPTAAMG 500
>gi|260801359|ref|XP_002595563.1| hypothetical protein BRAFLDRAFT_291044 [Branchiostoma floridae]
gi|229280810|gb|EEN51575.1| hypothetical protein BRAFLDRAFT_291044 [Branchiostoma floridae]
Length = 308
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
QV LEK + KY + ++A++IGLT+ QV WF +RR+K KR
Sbjct: 171 QVFQLEKRFQTQKYLAAAERQELAQRIGLTDTQVKTWFQNRRMKWKR 217
>gi|260835439|ref|XP_002612716.1| hypothetical protein BRAFLDRAFT_129968 [Branchiostoma floridae]
gi|229298095|gb|EEN68725.1| hypothetical protein BRAFLDRAFT_129968 [Branchiostoma floridae]
Length = 275
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
QV+ LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K K+
Sbjct: 182 QVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 228
>gi|195351089|ref|XP_002042069.1| GM26870 [Drosophila sechellia]
gi|194123893|gb|EDW45936.1| GM26870 [Drosophila sechellia]
Length = 601
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 26 ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL--SVDEAFVGGRQDR 83
ALEK + ++ PT E +Q+A+++ + ++ V WFC+RR KEKR+ S+D G D
Sbjct: 537 ALEKAFLANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRINPSLDSP-TGADDDE 595
Query: 84 SS 85
SS
Sbjct: 596 SS 597
>gi|345495457|ref|XP_001602856.2| PREDICTED: protein nubbin-like [Nasonia vitripennis]
Length = 516
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 3 SEENKVSLEKNIKRRYKTPAQV-----MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVS 57
S N ++ + I RR K + +ALEK + ++ PT E + +A+ + + ++ V
Sbjct: 360 SLSNPMTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEITILADSLAMEKEVVR 419
Query: 58 GWFCHRRLKEKRLSVDEAFVG 78
WFC+RR KEKR++ A +G
Sbjct: 420 VWFCNRRQKEKRINPPTAAMG 440
>gi|365176835|emb|CBY85303.2| HoxA14 homolog [Neoceratodus forsteri]
Length = 231
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q+ LEK + +++ T E + +A ++GLTE+QV WF ++R KEK+L + +
Sbjct: 155 KRVPYTKYQITELEKAFEVNRFLTPESRQHIAVKLGLTERQVKIWFQNQRQKEKKLLLRQ 214
>gi|195578779|ref|XP_002079241.1| GD23844 [Drosophila simulans]
gi|194191250|gb|EDX04826.1| GD23844 [Drosophila simulans]
Length = 601
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 26 ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL--SVDEAFVGGRQDR 83
ALEK + ++ PT E +Q+A+++ + ++ V WFC+RR KEKR+ S+D G D
Sbjct: 537 ALEKAFLANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRINPSLDSP-TGADDDE 595
Query: 84 SS 85
SS
Sbjct: 596 SS 597
>gi|410905523|ref|XP_003966241.1| PREDICTED: homeobox protein Hox-A13b-like [Takifugu rubripes]
Length = 289
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR T Q+ LE+ Y +K+ T++ + +++ Q LTE+QV+ WF +RR+KEK++
Sbjct: 226 KRVPYTKVQLKELEREYAANKFITKDKRRRISAQTNLTERQVTIWFQNRRVKEKKV 281
>gi|340727745|ref|XP_003402197.1| PREDICTED: hypothetical protein LOC100643103 [Bombus terrestris]
Length = 640
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 10 LEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
++ + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 30 IQNGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMK 89
Query: 67 EKRLSVDE 74
KR ++ +
Sbjct: 90 HKRQTLSK 97
>gi|4760768|dbj|BAA77403.1| PLOX3-Dj [Dugesia japonica]
Length = 363
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R T Q++ LEK ++ +KY T + + ++A+ + L+E+QV WF +RR+K K+ D
Sbjct: 241 RTAYTRQQILELEKEFHFNKYLTRKRRIEIAQSLQLSERQVKIWFQNRRMKWKK---DHH 297
Query: 76 FVGGRQDRSS 85
G +Q S+
Sbjct: 298 LPGNKQRLST 307
>gi|255755645|dbj|BAH96548.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 243
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
MH +E R T Q + LEK ++ ++Y T + ++A +GL+E+Q+ WF
Sbjct: 142 MHMSSGANGMEAKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWF 201
Query: 61 CHRRLKEKR 69
+RR+K K+
Sbjct: 202 QNRRMKWKK 210
>gi|312125851|gb|ADQ27869.1| fushi tarazu [Forficula auricularia]
Length = 191
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
Q + LEK ++ +KY T + ++A + LTE+Q+ WF +RR+KEK+ EA
Sbjct: 40 QTLELEKEFHFNKYLTRRRRIEIANALHLTERQIKIWFQNRRMKEKKTRSTEA 92
>gi|213510926|ref|NP_001134541.1| Homeobox protein Nkx-3.1 [Salmo salar]
gi|209734144|gb|ACI67941.1| Homeobox protein Nkx-3.1 [Salmo salar]
Length = 202
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T QV+ LEK +N KY + ++ +A +GLTE QV WF +RR K KR
Sbjct: 98 THLQVLELEKKFNHQKYLSAPERANLANTLGLTETQVKIWFQNRRYKTKR 147
>gi|17136366|ref|NP_476659.1| nubbin, isoform D [Drosophila melanogaster]
gi|400745|sp|P31368.1|PDM1_DROME RecName: Full=Protein nubbin; AltName: Full=POU domain protein 1;
Short=PDM-1; AltName: Full=Protein twain; AltName:
Full=dOCT1; AltName: Full=dPOU-19
gi|157288|gb|AAA28480.1| dPOU-19 [Drosophila melanogaster]
gi|158150|gb|AAA28829.1| POU domain protein [Drosophila melanogaster]
gi|21392124|gb|AAM48416.1| RE34782p [Drosophila melanogaster]
gi|22946343|gb|AAF53205.2| nubbin, isoform D [Drosophila melanogaster]
gi|220942510|gb|ACL83798.1| nub-PD [synthetic construct]
Length = 601
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 26 ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL--SVDEAFVGGRQDR 83
ALEK + ++ PT E +Q+A+++ + ++ V WFC+RR KEKR+ S+D G D
Sbjct: 537 ALEKAFLANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRINPSLDSP-TGADDDE 595
Query: 84 SS 85
SS
Sbjct: 596 SS 597
>gi|387598538|gb|AFJ91925.1| homeodomain transcription factor Lox5 [Platynereis dumerilii]
Length = 321
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ E+ R+ T Q + LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K
Sbjct: 189 EFGFEQKRTRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMK 248
Query: 67 EKR 69
K+
Sbjct: 249 WKK 251
>gi|167234210|ref|NP_001107807.1| maxillopedia [Tribolium castaneum]
gi|270002809|gb|EEZ99256.1| proboscipedia [Tribolium castaneum]
Length = 654
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 131 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 190
Query: 68 KRLSV 72
KR ++
Sbjct: 191 KRQTL 195
>gi|260835375|ref|XP_002612684.1| mesenchyme homeobox [Branchiostoma floridae]
gi|20069127|gb|AAM09689.1|AF490355_1 amphimox [Branchiostoma floridae]
gi|229298063|gb|EEN68693.1| mesenchyme homeobox [Branchiostoma floridae]
Length = 240
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T Q+M LE + H Y T + ++A ++ LTE+QV WF +RR+K KR
Sbjct: 153 TKQQIMELENEFRHHNYLTRLRRYEIAVKLDLTERQVKVWFQNRRMKWKR 202
>gi|301605997|ref|XP_002932598.1| PREDICTED: homeobox protein koza [Xenopus (Silurana) tropicalis]
Length = 211
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 5 ENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
E K+ L++ R + +QV+ LE+ ++ KY + ++Q+A+ + LTE QV WF +RR
Sbjct: 93 EKKLKLQQKRSRAAFSHSQVIELERKFSSQKYLSAPERAQLAKSLKLTETQVKIWFQNRR 152
Query: 65 LKEKR 69
K KR
Sbjct: 153 YKTKR 157
>gi|259013406|ref|NP_001158410.1| homeobox 5 [Saccoglossus kowalevskii]
gi|116574502|gb|ABK00019.1| hox 5 [Saccoglossus kowalevskii]
Length = 243
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
MH +E R T Q + LEK ++ ++Y T + ++A +GL+E+Q+ WF
Sbjct: 140 MHMSSGTNGMEAKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWF 199
Query: 61 CHRRLKEKR 69
+RR+K K+
Sbjct: 200 QNRRMKWKK 208
>gi|259013356|ref|NP_001158385.1| homeobox 4 [Saccoglossus kowalevskii]
gi|32307801|gb|AAP79297.1| hox4 [Saccoglossus kowalevskii]
Length = 274
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
QV+ LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K K+
Sbjct: 195 QVLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKK 241
>gi|391339305|ref|XP_003743992.1| PREDICTED: homeobox protein BarH-like 1-like [Metaseiulus
occidentalis]
Length = 191
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 3 SEENKVS---LEKNIKRRYK-TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
S+ N++S L KN + R T Q+M LE+ ++ KY + ++++A +GLT+ QV
Sbjct: 65 SDSNRLSPSLLRKNRRNRTVFTEVQLMGLERRFDMQKYLSTPDRAELARALGLTQLQVKT 124
Query: 59 WFCHRRLKEKR 69
W+ +RR+K K+
Sbjct: 125 WYQNRRMKWKK 135
>gi|258570165|ref|XP_002543886.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904156|gb|EEP78557.1| predicted protein [Uncinocarpus reesii 1704]
Length = 697
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
+N+ R T QV LE + PT +K Q+A Q LT +V+ WF +RR KEK+
Sbjct: 71 ENLSRPRLTKEQVETLEAQFQAQPKPTSNIKRQLAVQTNLTLPRVANWFQNRRAKEKQQK 130
Query: 72 VDEAF 76
E F
Sbjct: 131 RQEEF 135
>gi|8926595|gb|AAF81904.1|AF276815_1 homeodomain-containing protein Hox13 [Branchiostoma floridae]
Length = 75
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
T Q+ LE+ Y +++Y + E + ++++++ LT++QV WF +RR+K+KRL
Sbjct: 17 TKYQLSVLEQEYIQNRYVSRETRLELSQRLNLTDRQVKIWFQNRRMKQKRL 67
>gi|3983416|gb|AAC83926.1| homeodomain protein [Gallus gallus]
Length = 153
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 14 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 73
Query: 61 CHRRLK-EKRLSVDEAFVGGRQD 82
+RR K K+ + + A +QD
Sbjct: 74 QNRRTKWRKKHAAEMATAKKKQD 96
>gi|313246681|emb|CBY35561.1| unnamed protein product [Oikopleura dioica]
Length = 293
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KRR T Q+ LEK Y Y E + ++ +++ L+++QV WF +RR+KEK+L
Sbjct: 211 KRRPYTKQQIAELEKEYMSSTYIALEKRQELGDRLNLSDRQVKVWFQNRRMKEKKL 266
>gi|385654452|gb|AFI61956.1| Hox-A13a [Anguilla japonica]
Length = 294
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 6 NKVSLEKNIKRRYK-TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
+ S + K+R T AQ+ LE+ Y +K+ T++ + +++ Q L+E+QV+ WF +RR
Sbjct: 221 DGCSFRRGRKKRVPYTKAQLKELEREYAANKFITKDKRRRISAQTSLSERQVTIWFQNRR 280
Query: 65 LKEKRL 70
+KEK++
Sbjct: 281 VKEKKV 286
>gi|245324|gb|AAB21409.1| POU domain gene [Drosophila melanogaster]
Length = 601
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 26 ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
ALEK + ++ PT E +Q+A+++ + ++ V WFC+RR KEKR+
Sbjct: 537 ALEKAFLANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRI 581
>gi|256072096|ref|XP_002572373.1| pou4/brn-3 [Schistosoma mansoni]
gi|353231860|emb|CCD79215.1| putative pou4/brn-3 [Schistosoma mansoni]
Length = 695
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
E+ KR T ++ +LE F++ P+ E +Q+AE++ L + V WFC++R K+KR+
Sbjct: 621 ERRRKRTSITDSEKRSLEAFFSIQPRPSSEKIAQIAEKLNLKKNVVRVWFCNQRQKQKRM 680
>gi|222876508|gb|ACM69151.1| HoxPost protein [Symsagittifera roscoffensis]
gi|305379187|gb|ADM48792.1| posterior homeobox transcription factor [Symsagittifera
roscoffensis]
Length = 527
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KRR T Q + LEK + + Y T E + ++A + LT++QV WF +RR+K K+
Sbjct: 441 KRRPYTKNQTLELEKEFLFNTYITRERRLEIARSLNLTDRQVKIWFQNRRMKNKK 495
>gi|213626193|gb|AAI69752.1| Bix3-A protein [Xenopus laevis]
Length = 389
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
S + KVS + RR +T P+ + LE+++ + YP + ++A Q+GL E ++ W
Sbjct: 71 SNQQKVSPTQMSNRRKRTVYSPSDLARLEQYFRTNMYPDIHQREEMARQMGLLESRIQVW 130
Query: 60 FCHRRLKEKR 69
F +RR K KR
Sbjct: 131 FQNRRSKAKR 140
>gi|76443675|ref|NP_899071.2| NK6 transcription factor related, locus 2 [Mus musculus]
gi|157820587|ref|NP_001101028.1| NK6 homeobox 2 [Rattus norvegicus]
gi|479765|pir||S35304 homeotic protein Gtx - mouse
gi|147898087|gb|AAI40414.1| NK6 homeobox 2 [synthetic construct]
gi|148685913|gb|EDL17860.1| NK6 transcription factor related, locus 2 (Drosophila) [Mus
musculus]
gi|149061429|gb|EDM11852.1| NK6 transcription factor related, locus 2 (Drosophila) (predicted)
[Rattus norvegicus]
Length = 277
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 142 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 201
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDY-RSIDPR---EVQSRM 120
K KR + + A +QD + ++ GS D +Y R +DP E +R+
Sbjct: 202 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDD-------EYNRPLDPNSDDEKITRL 254
Query: 121 LYCH 124
L H
Sbjct: 255 LKKH 258
>gi|392869529|gb|EAS28038.2| hypothetical protein CIMG_08965 [Coccidioides immitis RS]
Length = 665
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
+N+ R T QV LE + PT +K Q+A Q LT +V+ WF +RR KEK+
Sbjct: 71 ENLSRPRLTKEQVETLEAQFQAQPKPTSNVKRQLAMQTNLTLPRVANWFQNRRAKEKQQK 130
Query: 72 VDEAF 76
E F
Sbjct: 131 RQEEF 135
>gi|213511200|ref|NP_001133042.1| homeobox protein Hox-A13b [Salmo salar]
gi|157816071|gb|ABV82054.1| homeobox protein HoxA13b [Salmo salar]
Length = 295
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 39/56 (69%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR T Q+ LE+ Y +K+ T++ + ++++Q LTE+QV+ WF +RR+KEK++
Sbjct: 232 KRVPYTKVQLKELEREYAANKFITKDKRRRISDQSNLTERQVTIWFQNRRVKEKKV 287
>gi|119370781|sp|Q1KKZ6.1|HXADB_FUGRU RecName: Full=Homeobox protein Hox-A13b
gi|94482779|gb|ABF22398.1| homeobox protein HoxA13b [Takifugu rubripes]
Length = 285
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR T Q+ LE+ Y +K+ T++ + +++ Q LTE+QV+ WF +RR+KEK++
Sbjct: 222 KRVPYTKVQLKELEREYAANKFITKDKRRRISAQTNLTERQVTIWFQNRRVKEKKV 277
>gi|260835425|ref|XP_002612709.1| hypothetical protein BRAFLDRAFT_229224 [Branchiostoma floridae]
gi|229298088|gb|EEN68718.1| hypothetical protein BRAFLDRAFT_229224 [Branchiostoma floridae]
Length = 78
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
T Q+ LE+ Y +++Y + E + ++++++ LT++QV WF +RR+K+KRL
Sbjct: 20 TKYQLSVLEQEYIQNRYVSRETRLELSQRLNLTDRQVKIWFQNRRMKQKRL 70
>gi|158702250|gb|ABW77456.1| homeobox protein HoxA13b [Salmo salar]
Length = 295
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 39/56 (69%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR T Q+ LE+ Y +K+ T++ + ++++Q LTE+QV+ WF +RR+KEK++
Sbjct: 232 KRVPYTKVQLKELEREYAANKFITKDKRRRISDQSNLTERQVTIWFQNRRVKEKKV 287
>gi|161076884|ref|NP_001097153.1| nubbin, isoform B [Drosophila melanogaster]
gi|157400152|gb|ABV53675.1| nubbin, isoform B [Drosophila melanogaster]
Length = 961
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 26 ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL--SVDEAFVGGRQDR 83
ALEK + ++ PT E +Q+A+++ + ++ V WFC+RR KEKR+ S+D G D
Sbjct: 897 ALEKAFLANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRINPSLDSP-TGADDDE 955
Query: 84 SS 85
SS
Sbjct: 956 SS 957
>gi|388453777|ref|NP_001253559.1| homeobox protein Nkx-6.2 [Macaca mulatta]
gi|380786785|gb|AFE65268.1| homeobox protein Nkx-6.2 [Macaca mulatta]
Length = 277
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 142 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 201
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDY-RSIDPR---EVQSRM 120
K KR + + A +QD + ++ GS D +Y R +DP E +R+
Sbjct: 202 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDD-------EYNRPLDPNSDDEKITRL 254
Query: 121 LYCH 124
L H
Sbjct: 255 LKKH 258
>gi|390351575|ref|XP_003727686.1| PREDICTED: uncharacterized protein LOC574804 [Strongylocentrotus
purpuratus]
Length = 270
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R+ T Q + LEK ++ +Y T + ++A+ +GL+E+Q+ WF +RR+K KR
Sbjct: 193 RQTYTRQQTLELEKEFHFSRYVTRRRRFEIAQSLGLSERQIKIWFQNRRMKWKREHGSNC 252
Query: 76 FVGGRQDRSSGVIQDRGS 93
+ +QD+ + GS
Sbjct: 253 SMTNQQDQMPSMADFIGS 270
>gi|18859547|ref|NP_571775.1| ventral expressed homeobox [Danio rerio]
gi|9937304|gb|AAG02408.1|AF255044_1 vent [Danio rerio]
gi|13649551|gb|AAK37442.1|AF277077_1 homeobox protein Vega2 [Danio rerio]
Length = 170
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 3 SEENKVSLEKNIKRRYK-TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFC 61
S++++V +N + R K T Q+ LEK +++H+Y + ++AE++ L+E QV WF
Sbjct: 54 SDDSEVEAGQNRRVRTKFTCDQISGLEKSFSKHRYLGATQRRKIAEKLHLSETQVKTWFQ 113
Query: 62 HRRLKEKR 69
+RR+K KR
Sbjct: 114 NRRMKLKR 121
>gi|312381981|gb|EFR27581.1| hypothetical protein AND_05633 [Anopheles darlingi]
Length = 666
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
TP Q +LEK ++ HKY + E + +A Q+ L+++QV WF +RR K +R
Sbjct: 233 TPQQTQSLEKRFSNHKYLSPEDRRNLAIQLKLSDRQVKTWFQNRRAKWRR 282
>gi|332692475|gb|AEE90156.1| Homeobox A13b [Anguilla anguilla]
gi|385654466|gb|AFI61968.1| Hox-A13b [Anguilla japonica]
Length = 295
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR T Q+ LE+ Y +K+ T++ + +++ Q LTE+QV+ WF +RR+KEK++
Sbjct: 232 KRVPYTKVQLKELEREYATNKFITKDKRRRISSQTNLTERQVTIWFQNRRVKEKKV 287
>gi|260826728|ref|XP_002608317.1| vent homeobox 1 [Branchiostoma floridae]
gi|229293668|gb|EEN64327.1| vent homeobox 1 [Branchiostoma floridae]
Length = 282
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
QVMALE+ + KY + + +A+ GLT++QV WF +RR+K KR D A
Sbjct: 127 QVMALEERFRLQKYLSAADRETLAKATGLTDEQVKTWFQNRRMKLKRQQQDFA 179
>gi|99029087|gb|ABF60831.1| Cdx2 [Polypterus senegalus]
Length = 256
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
Q + LEK ++ +Y T KS++A +GL+E+QV WF +RR KE++L+
Sbjct: 158 QRLELEKEFHYSRYITIRRKSEIAMSLGLSERQVKIWFQNRRAKERKLA 206
>gi|297687690|ref|XP_002821339.1| PREDICTED: homeobox protein Nkx-6.2 [Pongo abelii]
Length = 277
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 142 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 201
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDY-RSIDPR---EVQSRM 120
K KR + + A +QD + ++ GS D +Y R +DP E +R+
Sbjct: 202 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDD-------EYNRPLDPNSDDEKITRL 254
Query: 121 LYCH 124
L H
Sbjct: 255 LKKH 258
>gi|149027939|gb|EDL83390.1| pre-B-cell leukemia transcription factor 2, isoform CRA_e [Rattus
norvegicus]
Length = 192
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNE--HKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
+SL + +R + A + E FY+ + YP+EE K ++A++ G+T QVS WF ++R+
Sbjct: 3 LSLHRRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRI 62
Query: 66 KEKR 69
+ K+
Sbjct: 63 RYKK 66
>gi|28912912|ref|NP_796374.1| homeobox protein Nkx-6.2 [Homo sapiens]
gi|13160477|gb|AAK13251.1|AF184215_1 GTX [Homo sapiens]
gi|75517780|gb|AAI01636.1| NK6 homeobox 2 [Homo sapiens]
gi|85396895|gb|AAI04824.1| NK6 homeobox 2 [Homo sapiens]
gi|119581712|gb|EAW61308.1| NK6 transcription factor related, locus 2 (Drosophila) [Homo
sapiens]
Length = 277
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 142 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 201
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDY-RSIDPR---EVQSRM 120
K KR + + A +QD + ++ GS D +Y R +DP E +R+
Sbjct: 202 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDD-------EYNRPLDPNSDDEKITRL 254
Query: 121 LYCH 124
L H
Sbjct: 255 LKKH 258
>gi|393911492|gb|EJD76332.1| hypothetical protein LOAG_16680 [Loa loa]
Length = 239
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+V + N R T Q+ LEK Y KY ++++A + L E QV WF +RR+K
Sbjct: 123 RVVEDTNAMRTNFTTHQLTELEKEYYTSKYLNRTRRAEIASILQLNETQVKIWFQNRRMK 182
Query: 67 EKRLSVDEAFVG 78
EK+ ++AF+
Sbjct: 183 EKKRQKEQAFLA 194
>gi|354468561|ref|XP_003496721.1| PREDICTED: homeobox protein CDX-2-like [Cricetulus griseus]
Length = 260
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 5 ENKVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFC 61
EN+ L+ K +Y+ T Q + LEK ++ +Y T K+++A +GL+E+QV WF
Sbjct: 122 ENRRCLKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQ 181
Query: 62 HRRLKEKRL 70
+RR KE+++
Sbjct: 182 NRRAKERKI 190
>gi|258678269|gb|ACV87741.1| posterior class Hox protein [Convolutriloba longifissura]
Length = 557
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 10 LEKNI---KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
L +N+ KRR T Q + LEK + + Y T E + ++A + LT++QV WF +RR+K
Sbjct: 460 LVRNVSRKKRRPYTKNQTLELEKEFLYNTYITRERRLEIARSLNLTDRQVKIWFQNRRMK 519
Query: 67 EKR 69
K+
Sbjct: 520 NKK 522
>gi|253828361|gb|ACT36586.1| Anthox1a, partial [Nematostella vectensis]
Length = 153
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
K+ KR T Q++ LEK ++ +Y T+E ++++A + LTE+QV WF +RR+K K+
Sbjct: 78 KHRKRMAYTRIQLLELEKEFHFTRYLTKERRTEMARMLDLTERQVKIWFQNRRMKWKK 135
>gi|213623446|gb|AAI69754.1| Homeobox protein BIX3 [Xenopus laevis]
Length = 389
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
S + KVS + RR +T P+ + LE+++ + YP + ++A Q+GL E ++ W
Sbjct: 71 SNQQKVSPTQMSNRRKRTVYSPSDLARLEQYFRTNMYPDIHQREEMARQMGLLESRIQVW 130
Query: 60 FCHRRLKEKR 69
F +RR K KR
Sbjct: 131 FQNRRSKAKR 140
>gi|328866315|gb|EGG14700.1| homeobox transcription factor [Dictyostelium fasciculatum]
Length = 440
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 39/58 (67%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
+K KR+ +P Q+ LE+ + K P+++++ ++A Q+G++ ++V WF ++R K++
Sbjct: 255 DKKKKRQRTSPEQLAILEQIFETDKMPSQQIRHRLANQLGMSSRRVQIWFQNKRAKKQ 312
>gi|390595575|gb|EIN04980.1| homeobox-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 510
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR TP Q+ LE+F+ + PT + ++++ +G+ E+Q WF +RR K K L
Sbjct: 113 KRSRVTPEQLAHLERFFAADRSPTAARRKEISDLLGMQERQTQIWFQNRRAKAKSL 168
>gi|260828229|ref|XP_002609066.1| T-cell leukemia homeobox protein [Branchiostoma floridae]
gi|229294420|gb|EEN65076.1| T-cell leukemia homeobox protein [Branchiostoma floridae]
Length = 255
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFC 61
H +N+ ++ R T Q+ LEK +++ KY ++Q+A Q+ +T+ QV WF
Sbjct: 113 HPYQNRTPPKRKKPRTSFTRLQICELEKRFHKQKYLASAERAQLATQLKMTDAQVKTWFQ 172
Query: 62 HRRLKEKRLSVDE 74
+RR K +R + +E
Sbjct: 173 NRRTKWRRQTAEE 185
>gi|156407960|ref|XP_001641625.1| predicted protein [Nematostella vectensis]
gi|156228764|gb|EDO49562.1| predicted protein [Nematostella vectensis]
Length = 154
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
K+ KR T Q++ LEK ++ +Y T+E ++++A + LTE+QV WF +RR+K K+
Sbjct: 79 KHRKRMAYTRIQLLELEKEFHFTRYLTKERRTEMARMLDLTERQVKIWFQNRRMKWKK 136
>gi|29372467|emb|CAD83853.1| homeobox protein AmphiTlx [Branchiostoma floridae]
Length = 255
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFC 61
H +N+ ++ R T Q+ LEK +++ KY ++Q+A Q+ +T+ QV WF
Sbjct: 113 HPYQNRTPPKRKKPRTSFTRLQICELEKRFHKQKYLASAERAQLATQLKMTDAQVKTWFQ 172
Query: 62 HRRLKEKRLSVDE 74
+RR K +R + +E
Sbjct: 173 NRRTKWRRQTAEE 185
>gi|167004254|ref|NP_001107793.1| empty spiracles [Tribolium castaneum]
gi|162793850|emb|CAP58696.1| empty spiracles [Tribolium castaneum]
gi|270014246|gb|EFA10694.1| empty spiracles [Tribolium castaneum]
Length = 294
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K I+ + +P+Q++ LE + ++ Y + Q+A+ + LTE QV WF +RR K KR+
Sbjct: 177 KRIRTAF-SPSQLLKLEHAFEKNHYVVGAERKQLAQSLSLTETQVKVWFQNRRTKHKRMQ 235
Query: 72 VDE---AFVGGRQDRSSGVIQD--RGSGLRQDSCGSTKQGDYRSID 112
+E GG + S G Q+ + +Q++ + G+Y +D
Sbjct: 236 QEEEAKTSQGGNKSGSQGGQQNSHHVNKWKQETGDDGQYGEYIDMD 281
>gi|32263856|gb|AAA86634.2| HOM/Hox class homeobox protein [Nematostella vectensis]
Length = 155
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
K+ KR T Q++ LEK ++ +Y T+E ++++A + LTE+QV WF +RR+K K+
Sbjct: 80 KHRKRMAYTRIQLLELEKEFHFTRYLTKERRTEMARMLDLTERQVKIWFQNRRMKWKK 137
>gi|395842583|ref|XP_003794096.1| PREDICTED: homeobox protein Nkx-6.2 [Otolemur garnettii]
Length = 277
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 9 SLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 141 GLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRR 200
Query: 65 LK-EKRLSVDEAFVGGRQD 82
K KR + + A +QD
Sbjct: 201 TKWRKRHAAEMASAKKKQD 219
>gi|224098338|ref|XP_002199238.1| PREDICTED: homeobox protein CDX-4 [Taeniopygia guttata]
Length = 260
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 19/99 (19%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK ++ ++Y T KS++A +GL+E+QV WF +RR KE+++
Sbjct: 160 QRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKERKM------------ 207
Query: 83 RSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRML 121
I+ + S D G + Q D S+ P E+ + +
Sbjct: 208 -----IKKKISQF--DGSGGSAQSDSGSLSPNELSNSLF 239
>gi|109132103|ref|XP_001084578.1| PREDICTED: rhox homeobox family member 1 [Macaca mulatta]
gi|355705116|gb|EHH31041.1| Paired-like homeobox protein PEPP-1 [Macaca mulatta]
gi|355757666|gb|EHH61191.1| Paired-like homeobox protein PEPP-1 [Macaca fascicularis]
Length = 185
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 9 SLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
+++ I+R+ TP QV LE + +YP + ++AE +G+TE +V WF ++R + +
Sbjct: 99 NMQPRIRRKKFTPLQVQELESVFQRTQYPDVPTRRELAENLGVTEDKVRVWFKNKRARCR 158
Query: 69 R 69
R
Sbjct: 159 R 159
>gi|14279992|gb|AAK58840.1|AF303217_1 homeobox amphivent [Branchiostoma floridae]
Length = 279
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
QVMALE+ + KY + + +A+ GLT++QV WF +RR+K KR D A
Sbjct: 127 QVMALEERFRLQKYLSAADRETLAKATGLTDEQVKTWFQNRRMKLKRQQQDFA 179
>gi|307178715|gb|EFN67329.1| GS homeobox 1 [Camponotus floridanus]
Length = 321
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGG 79
T Q++ LE+ + + Y + + ++A + L+EKQV WF +RR+K K+ E G
Sbjct: 122 TSTQLLELEREFASNMYLSRLRRIEIATNLRLSEKQVKIWFQNRRVKYKK----EDLPSG 177
Query: 80 RQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSR 119
+ + + R G R+DSCG G R D E + R
Sbjct: 178 QNQKCCCL---RTCGKRKDSCGEESPG--RKCDQEEDEKR 212
>gi|19070094|emb|CAD24794.1| HOM-C transcription factor [Oscheius tipulae]
Length = 192
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+HS EK + Y T QV+ LEK ++ +KY T + + ++A + LTE+QV WF
Sbjct: 89 VHSNSTGPRGEKRQRTAY-TRVQVLELEKEFHFNKYLTRKRRLEIAHALTLTERQVKIWF 147
Query: 61 CHRRLKEKRLSVDE 74
+RR+K K+ + D+
Sbjct: 148 QNRRMKHKKENKDK 161
>gi|386783917|gb|AFJ24853.1| hypothetical protein, partial [Schmidtea mediterranea]
Length = 193
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGG 79
T Q++ LEK ++ +KY T + + ++A+ + L+E+QV WF +RR+K K+ D G
Sbjct: 75 TRQQILELEKEFHFNKYLTRKRRIEIAQSLQLSERQVKIWFQNRRMKWKK---DHHLPGN 131
Query: 80 RQDRSS 85
+Q S+
Sbjct: 132 KQRLST 137
>gi|38016603|gb|AAR07635.1| transcription factor Hox4 [Ptychodera flava]
Length = 275
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
QV+ LEK ++ ++Y T + ++A +GLTE+QV WF +RR+K K+
Sbjct: 196 QVLELEKEFHFNRYLTRRRRIEIAHALGLTERQVKIWFQNRRMKWKK 242
>gi|15824398|gb|AAL09323.1|AF303216_1 homeobox Hx [Branchiostoma floridae]
Length = 309
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
QV LEK + KY + ++A++IGLT+ QV WF +RR+K KR
Sbjct: 171 QVFQLEKRFQTQKYLAAAERQELAQRIGLTDTQVKTWFQNRRMKWKR 217
>gi|348582989|ref|XP_003477258.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein CDX-1-like [Cavia
porcellus]
Length = 285
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 181 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 228
>gi|157107071|ref|XP_001649611.1| hypothetical protein AaeL_AAEL004707 [Aedes aegypti]
gi|108879674|gb|EAT43899.1| AAEL004707-PA [Aedes aegypti]
Length = 307
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
TP Q +LE+ ++ HKY + E + +A Q+ L+++QV WF +RR K +R
Sbjct: 171 TPQQTQSLERRFSNHKYLSPEDRRHLAVQLKLSDRQVKTWFQNRRAKWRR 220
>gi|444726777|gb|ELW67297.1| Homeobox protein Nkx-6.2 [Tupaia chinensis]
Length = 157
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 22 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 81
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQD 98
K KR + + A +QD + ++ GS D
Sbjct: 82 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDD 115
>gi|42562138|ref|NP_564041.2| homeobox-leucine zipper protein HDG12 [Arabidopsis thaliana]
gi|75264044|sp|Q9LMT8.1|HDG12_ARATH RecName: Full=Homeobox-leucine zipper protein HDG12; AltName:
Full=HD-ZIP protein HDG12; AltName: Full=Homeodomain
GLABRA 2-like protein 12; AltName: Full=Homeodomain
transcription factor HDG12; AltName: Full=Protein
HOMEODOMAIN GLABROUS 12
gi|9665069|gb|AAF97271.1|AC034106_14 Strong similarity to meristem L1 layer homeobox protein (ATML1)
from Arabidopsis thaliana gb|U37589 and contains
Transposase PF|01527, Homeobox PF|00046, and START
PF|01852 domains. EST gb|AI995645 comes from this gene
[Arabidopsis thaliana]
gi|225897942|dbj|BAH30303.1| hypothetical protein [Arabidopsis thaliana]
gi|332191531|gb|AEE29652.1| homeobox-leucine zipper protein HDG12 [Arabidopsis thaliana]
Length = 687
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 34/49 (69%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
TP Q+ LE +NE ++P E+ ++Q++ ++GL +Q+ WF +RR ++K
Sbjct: 29 TPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQKK 77
>gi|322790287|gb|EFZ15286.1| hypothetical protein SINV_14557 [Solenopsis invicta]
Length = 204
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R T Q + LEK ++ + Y T + K+ +A Q+GLTE+Q+ WF +RR K+++L+ +
Sbjct: 9 RVVYTDYQRLELEKEFHMNHYTTIKRKADLALQLGLTERQIKIWFQNRRAKQRKLAKKQL 68
Query: 76 -FVGGRQDRSSGVI 88
+ RQ RS V+
Sbjct: 69 EQIRERQMRSQDVV 82
>gi|154281025|ref|XP_001541325.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411504|gb|EDN06892.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 732
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
++N+ R T QV LE + H P +K Q+A Q LT +V+ WF +RR K K+
Sbjct: 66 KENLSRPRLTKDQVDTLEAQFQAHPKPNSNIKRQLAAQTNLTLPRVANWFQNRRAKAKQQ 125
Query: 71 SVDEAF------VGGRQDRSSGVIQDRGSGLRQ-----DSCGSTKQGD--YRSIDPREVQ 117
E F G Q +++ Q G+ Q S T+Q D S++P EV+
Sbjct: 126 KRQEEFERMQASENGEQWKNNDTKQKEGASKEQSERLESSATPTQQPDPSSSSLNPSEVE 185
>gi|121308833|dbj|BAF43723.1| transcription factor Hox4 [Metacrinus rotundus]
Length = 280
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 10 LEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+E R T Q++ LEK ++ ++Y T + ++A+ +GL+E+Q+ WF +RR+K K+
Sbjct: 184 MEAKRSRTSYTRQQILELEKEFHFNRYLTRRRRIEIAQALGLSERQIKIWFQNRRMKWKK 243
>gi|34786941|emb|CAD37942.1| homeobox protein HOXb1 [Suberites domuncula]
Length = 345
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 22 AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
AQV LE+ + KY T + Q+A + LTE QV WF +RR K KR +++
Sbjct: 163 AQVFELERRFAVQKYLTAHEREQLASMLHLTETQVKIWFQNRRYKNKRQQIEQ 215
>gi|213515310|ref|NP_001133038.1| homeobox protein HoxA9ab [Salmo salar]
gi|157816059|gb|ABV82048.1| homeobox protein HoxA9ab [Salmo salar]
gi|158702238|gb|ABW77450.1| homeobox protein HoxA9ab [Salmo salar]
Length = 267
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 6 NKVS--LEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
N VS L + R+ + P Q++ LEK + + Y T + + +VA Q+ LTE+QV WF
Sbjct: 188 NPVSNWLHASATRKKRCPYSKHQILELEKEFLFNTYLTRDRRFEVARQLNLTERQVKIWF 247
Query: 61 CHRRLKEKRLSVD 73
+RR+K K+ + D
Sbjct: 248 QNRRMKMKKFNKD 260
>gi|148237574|ref|NP_001079072.1| homeobox protein BIX3 [Xenopus laevis]
gi|3661469|gb|AAC61703.1| homeobox protein BIX3 [Xenopus laevis]
Length = 389
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
S + KVS + RR +T P+ + LE+++ + YP + ++A Q+GL E ++ W
Sbjct: 71 SNQQKVSPTQMSNRRKRTVYSPSDLARLEQYFRTNMYPDIHQREEMARQMGLLESRIQVW 130
Query: 60 FCHRRLKEKR 69
F +RR K KR
Sbjct: 131 FQNRRSKAKR 140
>gi|359323273|ref|XP_003640053.1| PREDICTED: homeobox protein Nkx-6.2-like [Canis lupus familiaris]
Length = 275
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 141 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 200
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDY-RSIDPR---EVQSRM 120
K KR + + A +QD + ++ GS D +Y R +DP E +R+
Sbjct: 201 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDD-------EYNRPLDPNSDDEKITRL 253
Query: 121 LYCH 124
L H
Sbjct: 254 LKKH 257
>gi|332835399|ref|XP_521638.3| PREDICTED: homeobox protein Nkx-6.2 [Pan troglodytes]
Length = 276
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 17/124 (13%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 142 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 201
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDY-RSIDPR---EVQSRM 120
K KR + + A +QD + ++ GS D +Y R +DP E +R+
Sbjct: 202 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDD--------EYNRPLDPNSDDEKITRL 253
Query: 121 LYCH 124
L H
Sbjct: 254 LKKH 257
>gi|260826730|ref|XP_002608318.1| vent homeobox 2 [Branchiostoma floridae]
gi|229293669|gb|EEN64328.1| vent homeobox 2 [Branchiostoma floridae]
Length = 234
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
QVMALE+ + KY + + +A+ GLT++QV WF +RR+K KR D A
Sbjct: 79 QVMALEERFRLQKYLSAADRETLAKATGLTDEQVKTWFQNRRMKLKRQQQDFA 131
>gi|310893855|gb|ADP37891.1| ladybird-type homeobox transcription factor Lbx-A [Lethenteron
camtschaticum]
Length = 213
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGG 79
T AQ+ LEK + KY + + Q+A+Q+GLT QV WF +RR K KR ++E
Sbjct: 79 TNAQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKR-DLEEMKADV 137
Query: 80 RQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREV 116
+ I G G S R++D REV
Sbjct: 138 ESTKKIDPIALVGEGALPTSLVEAMSPGVRALDRREV 174
>gi|49903787|gb|AAH76488.1| Cdx4 protein [Danio rerio]
gi|197246985|gb|AAI64427.1| Cdx4 protein [Danio rerio]
Length = 258
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK ++ ++Y T KS++A +GL+E+QV WF +RR KE++L + G+ D
Sbjct: 150 QRLELEKEFHFNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKLIKKKL---GQSD 206
Query: 83 RSSGVIQ-DRGS 93
S G + D GS
Sbjct: 207 GSGGSVHSDPGS 218
>gi|405109806|emb|CCH51005.1| fushi tarazu, partial [Phalangium opilio]
Length = 281
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
M S + +K ++ Y T Q + LEK ++ ++Y T + ++A +GLTE+Q+ WF
Sbjct: 207 MKSYTDSCQGQKRTRQTY-TRIQTLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWF 265
Query: 61 CHRRLKEKR 69
+RR+K K+
Sbjct: 266 QNRRMKAKK 274
>gi|345327993|ref|XP_001515131.2| PREDICTED: homeobox protein Hox-D8-like, partial [Ornithorhynchus
anatinus]
Length = 267
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ +GLTE+QV WF +RR+K K+ + + F RQ+
Sbjct: 185 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPASRQE 244
Query: 83 RSSGVIQDRGSGLRQD 98
G + L +D
Sbjct: 245 GKEGEAKKEAQDLDED 260
>gi|147904274|ref|NP_001078963.1| homeobox protein Hox-A13a [Danio rerio]
gi|110282972|sp|Q6W990.2|HXADA_DANRE RecName: Full=Homeobox protein Hox-A13a
gi|126631819|gb|AAI33883.1| Hoxa13a protein [Danio rerio]
Length = 310
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 2 HSEENKVSLEKNIKRRYK-TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
H + S + K+R T Q+ LE+ Y +K+ T++ + +++ Q L+E+QV+ WF
Sbjct: 233 HGGADGSSFRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISAQTNLSERQVTIWF 292
Query: 61 CHRRLKEKRL 70
+RR+KEK++
Sbjct: 293 QNRRVKEKKV 302
>gi|405966406|gb|EKC31695.1| POU domain, class 3, transcription factor 4 [Crassostrea gigas]
Length = 413
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 15 KRRYKTPAQVM---ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
KR+ +T +V ALE + + P + SQ+AEQ+ L ++ V WFC+RR KEKR++
Sbjct: 267 KRKKRTSIEVTVKGALENHFMKQPKPAAQEISQLAEQLQLEKEVVRVWFCNRRQKEKRMT 326
>gi|327289479|ref|XP_003229452.1| PREDICTED: POU domain, class 2, transcription factor 2-like [Anolis
carolinensis]
Length = 633
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E N++ ALEK + ++ PT E +AEQ+ + ++ + WFC+RR K
Sbjct: 340 RTSIETNVR---------FALEKSFLANQKPTSEEILLIAEQLNMEKEVIRVWFCNRRQK 390
Query: 67 EKRL 70
EKR+
Sbjct: 391 EKRI 394
>gi|62510|emb|CAA47380.1| Zf-cad1 protein [Danio rerio]
Length = 300
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK ++ ++Y T KS++A +GL+E+QV WF +RR KE++L + G+ D
Sbjct: 162 QRLELEKEFHFNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKLIKKKL---GQSD 218
Query: 83 RSSGVIQ-DRGS 93
S G + D GS
Sbjct: 219 GSGGSVHSDPGS 230
>gi|443689501|gb|ELT91875.1| hypothetical protein CAPTEDRAFT_219807 [Capitella teleta]
Length = 305
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+ N+ R T Q+ LEK ++ +KY T + ++A +GL E QV WF +RR+K+K+
Sbjct: 219 QPNMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAASLGLNETQVKIWFQNRRMKQKK 277
>gi|241756306|ref|XP_002406404.1| fushi tarazu, putative [Ixodes scapularis]
gi|215506141|gb|EEC15635.1| fushi tarazu, putative [Ixodes scapularis]
Length = 110
Score = 45.8 bits (107), Expect = 0.053, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R+ T Q + LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K K+ + +
Sbjct: 19 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKAKKENKLQG 78
Query: 76 --FVGGRQDRSSGVIQD 90
V D GV+QD
Sbjct: 79 GLLVPKPVDELGGVLQD 95
>gi|143347034|gb|ABO93211.1| Nk6 [Platynereis dumerilii]
Length = 287
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 3 SEENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
S + +S++K+ K+++ P Q+ ALEK + + KY ++++A +G++E QV
Sbjct: 165 SGQGGMSVDKDGKKKHTRPTFSGHQIFALEKTFEQTKYLAGPERARLAYALGMSESQVKV 224
Query: 59 WFCHRRLK-EKRLSVDEAFVGGRQD 82
WF +RR K KR + + A RQ+
Sbjct: 225 WFQNRRTKWRKRHAAEMATAKKRQE 249
>gi|47228655|emb|CAG07387.1| unnamed protein product [Tetraodon nigroviridis]
Length = 467
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
+ I RY+T + LEK ++ ++Y T + ++A + LTE+Q+ WF +RR+K K+ S
Sbjct: 375 RQIYSRYQT----LELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKES 430
Query: 72 VDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQG 106
+ V G + +G QD G +D G T++G
Sbjct: 431 NLTSTVTG--NEQTGGSQDEG----EDRGGVTEEG 459
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGR 80
Q + LEK + + Y T + + +V+ + LTE+QV WF +RR+K K+ + + F G R
Sbjct: 197 QTLELEKEFLFNPYLTRKRRIEVSHALSLTERQVKIWFQNRRMKWKKENNKDKFPGPR 254
>gi|206600987|gb|ACI16356.1| homeodomain protein [Branchiostoma floridae]
Length = 259
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFC 61
H +N+ ++ R T Q+ LEK +++ KY ++Q+A Q+ +T+ QV WF
Sbjct: 117 HPYQNRTPPKRKKPRTSFTRLQICELEKRFHKQKYLASAERAQLATQLKMTDAQVKTWFQ 176
Query: 62 HRRLKEKRLSVDE 74
+RR K +R + +E
Sbjct: 177 NRRTKWRRQTAEE 189
>gi|443707628|gb|ELU03141.1| hypothetical protein CAPTEDRAFT_70154, partial [Capitella teleta]
Length = 62
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
QV ALE Y+ Y T+ + +VA ++ LTE+Q+ W+ +RR+KEK+++
Sbjct: 11 QVSALENEYSTSTYITKARRKEVARELDLTERQIKIWYQNRRIKEKKIA 59
>gi|7527478|gb|AAF63162.1|AF237818_1 fushi tarazu-like protein [Archegozetes longisetosus]
Length = 278
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
R+ T Q + LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K K+
Sbjct: 200 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKAKK 253
>gi|313229201|emb|CBY23786.1| unnamed protein product [Oikopleura dioica]
Length = 249
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 14/107 (13%)
Query: 3 SEENKVSLEKNIKR-----RYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEK 54
S+ENK +L N++R + +TP Q+ LE + + +Y T +++ + ++ LTE
Sbjct: 138 SDENKPTLVSNLRRHKRDRKPRTPFSSEQLERLESRFADKQYLTIPERAEFSNELSLTET 197
Query: 55 QVSGWFCHRRLKEKRLSVDEA-----FVGGRQDRSS-GVIQDRGSGL 95
QV WF +RR K+KRL+ E VG Q ++ G++ GL
Sbjct: 198 QVKIWFQNRRAKQKRLAEAEIEKVRYMVGTAQAQARMGLLNSHFPGL 244
>gi|251857555|gb|ACT22573.1| posterior Hox2 [Convolutriloba retrogemma]
Length = 289
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KRR T Q + LEK + + Y T E + ++A + LT++QV WF +RR+K K+
Sbjct: 200 KRRPYTKNQTLELEKEFLYNTYITRERRLEIARSLNLTDRQVKIWFQNRRMKNKK 254
>gi|440908508|gb|ELR58516.1| Homeobox protein Nkx-6.1, partial [Bos grunniens mutus]
Length = 152
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 8 VSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+ L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF +R
Sbjct: 38 ILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNR 97
Query: 64 RLK-EKRLSVDEAFVGGRQD 82
R K K+ + + A +QD
Sbjct: 98 RTKWRKKHAAEMATAKKKQD 117
>gi|56714069|gb|AAW24005.1| homeodomain protein Msx [Oikopleura dioica]
Length = 252
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 14/107 (13%)
Query: 3 SEENKVSLEKNIKR-----RYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEK 54
S+ENK +L N++R + +TP Q+ LE + + +Y T +++ + ++ LTE
Sbjct: 141 SDENKPTLVSNLRRHKRDRKPRTPFSSEQLERLESRFADKQYLTIPERAEFSNELSLTET 200
Query: 55 QVSGWFCHRRLKEKRLSVDEA-----FVGGRQDRSS-GVIQDRGSGL 95
QV WF +RR K+KRL+ E VG Q ++ G++ GL
Sbjct: 201 QVKIWFQNRRAKQKRLAEAEIEKVRYMVGTAQAQARMGLLNSHFPGL 247
>gi|251857553|gb|ACT22572.1| posterior Hox1 [Convolutriloba retrogemma]
Length = 286
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KRR T Q + LEK + + Y T E + ++A + LT++QV WF +RR+K K+
Sbjct: 197 KRRPYTKNQTLELEKEFLYNTYITRERRLEIARSLNLTDRQVKIWFQNRRMKNKK 251
>gi|187607954|ref|NP_001120328.1| uncharacterized protein LOC100145392 [Xenopus (Silurana)
tropicalis]
gi|319918830|ref|NP_571184.2| homeobox protein CDX-4 [Danio rerio]
gi|158253566|gb|AAI54242.1| Cdx4 protein [Danio rerio]
gi|169146089|emb|CAQ13437.1| caudal type homeo box transcription factor 4 [Danio rerio]
gi|169642536|gb|AAI60643.1| Cdx4 protein [Danio rerio]
gi|170285089|gb|AAI60957.1| LOC100145392 protein [Xenopus (Silurana) tropicalis]
Length = 270
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK ++ ++Y T KS++A +GL+E+QV WF +RR KE++L + G+ D
Sbjct: 162 QRLELEKEFHFNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKLIKKKL---GQSD 218
Query: 83 RSSGVIQ-DRGS 93
S G + D GS
Sbjct: 219 GSGGSVHSDPGS 230
>gi|301611068|ref|XP_002935067.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Xenopus (Silurana) tropicalis]
Length = 419
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 9/66 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ + LEK + ++ P+ E S +AEQ+ + ++ V WFC+RR K
Sbjct: 270 RTSIETNIR---------LTLEKRFQDNPKPSSEEISMIAEQLVMEKEVVRVWFCNRRQK 320
Query: 67 EKRLSV 72
EKR++
Sbjct: 321 EKRINC 326
>gi|255755643|dbj|BAH96547.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 278
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
QV+ LEK ++ ++Y T + ++A +GLTE+QV WF +RR+K K+
Sbjct: 198 QVLELEKEFHFNRYLTRRRRIEIAHALGLTERQVKIWFQNRRMKWKK 244
>gi|45360975|ref|NP_988847.1| Brachyury-inducible homeobox 1, gene 1 [Xenopus (Silurana)
tropicalis]
gi|26224752|gb|AAN76333.1| homeodomain transcription factor Bix [Xenopus (Silurana)
tropicalis]
Length = 400
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
+ + KVS RR +T P+ + LE+++ + YP + ++A Q+GL E ++ W
Sbjct: 71 TNQQKVSPTPTSNRRKRTVYSPSDLAQLEQYFRANMYPDIHQREELAGQMGLPESRIQVW 130
Query: 60 FCHRRLKEKR 69
F +RR K KR
Sbjct: 131 FQNRRSKAKR 140
>gi|299906605|gb|ADJ58017.1| Six1/2 [Chalinula loosanoffi]
Length = 446
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 25 MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
+ L ++Y ++ YP+ K Q+AEQ GLT QVS WF +RR +++
Sbjct: 157 VVLRQWYTKNPYPSPREKRQLAEQTGLTTTQVSNWFKNRRQRDR 200
>gi|281352774|gb|EFB28358.1| hypothetical protein PANDA_003894 [Ailuropoda melanoleuca]
Length = 140
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 7 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 66
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDY-RSIDPR---EVQSRM 120
K KR + + A +QD + ++ GS D +Y R +DP E +R+
Sbjct: 67 KWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDD-------EYNRPLDPNSDDEKIARL 119
Query: 121 LYCH 124
L H
Sbjct: 120 LQKH 123
>gi|303313929|ref|XP_003066973.1| Homeobox domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240106641|gb|EER24828.1| Homeobox domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 665
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
+N+ R T QV LE + PT +K Q+A Q LT +V+ WF +RR KEK+
Sbjct: 71 ENLSRPRLTKEQVETLEAQFRAQPKPTSNVKRQLAMQTNLTLPRVANWFQNRRAKEKQQK 130
Query: 72 VDEAF 76
E F
Sbjct: 131 RQEEF 135
>gi|15983360|gb|AAL11548.1|AF424554_1 At1g17920/F2H15_22 [Arabidopsis thaliana]
gi|24111361|gb|AAN46804.1| At1g17920/F2H15_22 [Arabidopsis thaliana]
Length = 406
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 34/49 (69%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
TP Q+ LE +NE ++P E+ ++Q++ ++GL +Q+ WF +RR ++K
Sbjct: 29 TPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQKK 77
>gi|34484434|gb|AAQ72839.1| HoxA13a [Danio rerio]
Length = 310
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 2 HSEENKVSLEKNIKRRYK-TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
H + S + K+R T Q+ LE+ Y +K+ T++ + +++ Q L+E+QV+ WF
Sbjct: 233 HGGADGSSFRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISAQTNLSERQVTIWF 292
Query: 61 CHRRLKEKRL 70
+RR+KEK++
Sbjct: 293 QNRRVKEKKV 302
>gi|165873655|gb|ABY67952.1| labial hox protein [Capitella teleta]
Length = 296
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+ N+ R T Q+ LEK ++ +KY T + ++A +GL E QV WF +RR+K+K+
Sbjct: 210 QPNMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAASLGLNETQVKIWFQNRRMKQKK 268
>gi|213983133|ref|NP_001135485.1| Brachyury-inducible homeobox 1, gene 2 [Xenopus (Silurana)
tropicalis]
gi|195539567|gb|AAI67868.1| Unknown (protein for MGC:135081) [Xenopus (Silurana) tropicalis]
Length = 398
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
+ + KVS RR +T P+ + LE+++ + YP + ++A Q+GL E ++ W
Sbjct: 70 TNQQKVSPTPTSNRRKRTVYSPSDLAQLEQYFRANMYPDIHQREELAGQMGLPESRIQVW 129
Query: 60 FCHRRLKEKR 69
F +RR K KR
Sbjct: 130 FQNRRPKAKR 139
>gi|385654474|gb|AFI61975.1| Hox-B13a [Anguilla japonica]
Length = 305
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV 72
KR T Q+ LEK Y +K+ T++ + +++ L+E+Q++ WF +RR+KEK+LS
Sbjct: 238 KRIPYTKVQLKELEKEYTANKFITKDKRRKISAVTNLSERQITIWFQNRRVKEKKLSA 295
>gi|339241423|ref|XP_003376637.1| homeotic protein labial [Trichinella spiralis]
gi|316974634|gb|EFV58118.1| homeotic protein labial [Trichinella spiralis]
Length = 218
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAF 76
T Q+ LEK ++ ++Y T + ++A Q+GL E QV WF +RR+K+K+ ++ F
Sbjct: 73 TTKQLTELEKEFHTNRYLTRARRIEIASQLGLNETQVKIWFQNRRMKQKKHLKEKGF 129
>gi|449506409|ref|XP_004186166.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein GBX-2 [Taeniopygia
guttata]
Length = 183
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 6 NKVSLEKNIKRRYK-TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
N S KN +RR T Q++ LEK ++ KY + +SQ+A + L+E QV WF +RR
Sbjct: 75 NTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRR 134
Query: 65 LKEKRLSVDEA 75
K KR+ A
Sbjct: 135 AKWKRVKAGNA 145
>gi|63259070|gb|AAD46174.2|AF151671_1 Lox5 homeobox protein [Alitta virens]
Length = 132
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E+ R+ T Q + LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K
Sbjct: 1 FGFEQKRTRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKW 60
Query: 68 KR 69
K+
Sbjct: 61 KK 62
>gi|405967557|gb|EKC32705.1| Homeobox protein Hox-A1 [Crassostrea gigas]
Length = 117
Score = 45.8 bits (107), Expect = 0.058, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+ N+ R T Q+ LEK ++ +KY T + ++A +GL E QV WF +RR+K+K+
Sbjct: 24 QPNMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQVKIWFQNRRMKQKKR 83
Query: 71 SVDEAFVGGRQDRSS 85
+ F R D S
Sbjct: 84 LREAQFDQNRGDNCS 98
>gi|383861855|ref|XP_003706400.1| PREDICTED: homeobox protein orthopedia-like [Megachile rotundata]
Length = 348
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 5 ENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+NK + +K + R+ TPAQ+ LE+ +N YP ++ ++A +IGLTE +V WF
Sbjct: 66 DNKPAKQKRHRTRF-TPAQLNELERCFNRTHYPDIFLREEIAVKIGLTESRVQVWF 120
>gi|307178559|gb|EFN67248.1| Homeobox protein mab-5 [Camponotus floridanus]
Length = 354
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 27 LEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQDRSSG 86
LEK + H+Y +++ + ++++Q+ LTE+Q+ WF +RR+K K+L + + D SS
Sbjct: 236 LEKEFYTHQYVSKQRREELSQQLHLTERQIKIWFQNRRMKNKKLKSE-----SQNDVSSS 290
Query: 87 VIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSR 119
SG+ D Q + +S +++QS+
Sbjct: 291 TTAINDSGI--DMIQQAIQQEQKSNISQQLQSQ 321
>gi|170029585|ref|XP_001842672.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863991|gb|EDS27374.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 273
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 121 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 180
Query: 68 KRLSV 72
KR ++
Sbjct: 181 KRQTL 185
>gi|19070093|emb|CAD24770.1| HOM-C transcription factor [Oscheius tipulae]
Length = 194
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+R T QV+ LEK ++ +KY T + + ++A + LTE+QV WF +RR+K K+
Sbjct: 101 QRTAYTRVQVLELEKEFHFNKYLTRKRRLEIAHALTLTERQVKIWFQNRRMKHKK 155
>gi|70608221|gb|AAZ04407.1| bix [Xenopus (Silurana) tropicalis]
Length = 400
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
+ + KVS RR +T P+ + LE+++ + YP + ++A Q+GL E ++ W
Sbjct: 71 TNQQKVSPTPTSNRRKRTVYSPSDLAQLEQYFRANMYPDIHQREELAGQMGLPESRIQVW 130
Query: 60 FCHRRLKEKR 69
F +RR K KR
Sbjct: 131 FQNRRSKAKR 140
>gi|89269028|emb|CAJ82536.1| homeodomain transcription factor Bix [Xenopus (Silurana)
tropicalis]
Length = 400
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
+ + KVS RR +T P+ + LE+++ + YP + ++A Q+GL E ++ W
Sbjct: 71 TNQQKVSPTPTSNRRKRTVYSPSDLAQLEQYFRANMYPDIHQREELAGQMGLPESRIQVW 130
Query: 60 FCHRRLKEKR 69
F +RR K KR
Sbjct: 131 FQNRRSKAKR 140
>gi|351705064|gb|EHB07983.1| Homeobox protein Nkx-6.2 [Heterocephalus glaber]
Length = 277
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 142 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 201
Query: 66 K-EKRLSVDEAFVGGRQDRSSGVIQDRGS 93
K KR + + A +QD + ++ GS
Sbjct: 202 KWRKRHAAEMASAKKKQDSDAEKLKVGGS 230
>gi|332018457|gb|EGI59047.1| Homeotic protein empty spiracle [Acromyrmex echinatior]
Length = 668
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K I+ + +P+Q++ LE + ++ Y + Q+A+ + LTE QV WF +RR K KR+
Sbjct: 536 KRIRTAF-SPSQLLKLEHAFEKNHYVVGAERKQLAQALSLTETQVKVWFQNRRTKHKRMQ 594
Query: 72 VDE 74
+E
Sbjct: 595 QEE 597
>gi|270002888|gb|EEZ99335.1| Hex homeobox [Tribolium castaneum]
Length = 186
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE----- 74
T Q ALEK + HKY + E + +AE + LT++QV WF +RR K +R +
Sbjct: 111 TANQTDALEKRFTSHKYLSPEDRKLLAESLKLTDRQVKTWFQNRRAKWRRCNSSSEVSST 170
Query: 75 ----AFVGGRQDRSS 85
FV + D+SS
Sbjct: 171 ENKCIFVCNKADKSS 185
>gi|392056665|gb|AFM52654.1| Hox11/13b, partial [Prionocidaris baculosa]
Length = 120
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
+ KRR + Q+ LEK + + Y T + +S++++ + LTE+QV WF +RR+K K+L+
Sbjct: 1 RRTKRRPYSKLQIYELEKEFQANMYLTRDRRSKLSQALDLTERQVKIWFQNRRMKMKKLN 60
Query: 72 VDEAFVGGRQ 81
E G++
Sbjct: 61 EKEKSHDGKK 70
>gi|344296088|ref|XP_003419741.1| PREDICTED: hypothetical protein LOC100668108 [Loxodonta africana]
Length = 724
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 589 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 648
Query: 66 K-EKRLSVDEAFVGGRQD 82
K KR + + A +QD
Sbjct: 649 KWRKRHAAEMASAKKKQD 666
>gi|332692483|gb|AEE90163.1| Homeobox B13a [Anguilla anguilla]
Length = 305
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV 72
KR T Q+ LEK Y +K+ T++ + +++ L+E+Q++ WF +RR+KEK+LS
Sbjct: 238 KRIPYTKVQLKELEKEYTANKFITKDKRRKISAVTNLSERQITIWFQNRRVKEKKLSA 295
>gi|328779292|ref|XP_624481.3| PREDICTED: hypothetical protein LOC552099 [Apis mellifera]
Length = 449
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K I+ + +P+Q++ LE + ++ Y + Q+A+ + LTE QV WF +RR K KR+
Sbjct: 317 KRIRTAF-SPSQLLKLEHAFEKNHYVVGAERKQLAQALSLTETQVKVWFQNRRTKHKRMQ 375
Query: 72 VDE 74
+E
Sbjct: 376 QEE 378
>gi|6573558|pdb|1CQT|A Chain A, Crystal Structure Of A Ternary Complex Containing An Oca-B
Peptide, The Oct-1 Pou Domain, And An Octamer Element
gi|6573559|pdb|1CQT|B Chain B, Crystal Structure Of A Ternary Complex Containing An Oca-B
Peptide, The Oct-1 Pou Domain, And An Octamer Element
Length = 163
Score = 45.4 bits (106), Expect = 0.060, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 9/67 (13%)
Query: 5 ENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
+ + S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR
Sbjct: 105 KKRTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRR 155
Query: 65 LKEKRLS 71
KEKR++
Sbjct: 156 QKEKRIN 162
>gi|340725585|ref|XP_003401149.1| PREDICTED: hypothetical protein LOC100642539 [Bombus terrestris]
Length = 447
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K I+ + +P+Q++ LE + ++ Y + Q+A+ + LTE QV WF +RR K KR+
Sbjct: 314 KRIRTAF-SPSQLLKLEHAFEKNHYVVGAERKQLAQALSLTETQVKVWFQNRRTKHKRMQ 372
Query: 72 VDE 74
+E
Sbjct: 373 QEE 375
>gi|31323439|gb|AAP47021.1| ParaHox-GSX [Diplosoma listerianum]
Length = 156
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T Q+M LEK + Y T + Q+A+ + L+EKQV WF +RR+KEK+
Sbjct: 89 TGHQLMELEKEFRADMYLTRLRRIQIAQDLLLSEKQVKIWFQNRRVKEKK 138
>gi|27525471|emb|CAD59668.1| putative homeobox protein hox2 [Ciona intestinalis]
Length = 134
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T Q++ LEK ++ +KY + ++A ++ LTE+QV WF +RR+K KR
Sbjct: 15 TNTQLLELEKEFHYNKYLCRPRRIEIATRLDLTERQVKVWFQNRRMKHKR 64
>gi|332861039|ref|XP_529040.3| PREDICTED: homeobox protein CDX-4 [Pan troglodytes]
Length = 284
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 7 KVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+V+ + K +Y+ T Q + LEK ++ ++Y T + KS++A +GL+E+QV WF +R
Sbjct: 165 QVTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNR 224
Query: 64 RLKEKRL 70
R KE+++
Sbjct: 225 RAKERKM 231
>gi|156362127|ref|XP_001625632.1| predicted protein [Nematostella vectensis]
gi|156212475|gb|EDO33532.1| predicted protein [Nematostella vectensis]
Length = 185
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 15 KRRYKTPAQVM---ALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
KR+ +T +V ALE + + PT + S +AE +GL ++ V WFC+RR KEKR++
Sbjct: 126 KRKKRTSIEVAVKGALENHFCKSPKPTAQEISALAENLGLDKEVVRVWFCNRRQKEKRMT 185
>gi|4322051|gb|AAD15935.1| homeobox protein [Danio rerio]
Length = 67
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 36/51 (70%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
T Q+ LE+ Y +K+ T++ + +++ Q L+E+QV+ WF +RR+KEK++
Sbjct: 9 TKVQLKELEREYATNKFITKDKRRRISAQTNLSERQVTIWFQNRRVKEKKV 59
>gi|344282008|ref|XP_003412767.1| PREDICTED: homeobox protein CDX-4-like [Loxodonta africana]
Length = 284
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 7 KVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+V+ + K +Y+ T Q + LEK ++ ++Y T + KS++A +GL+E+QV WF +R
Sbjct: 165 QVTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNR 224
Query: 64 RLKEKRL 70
R KE+++
Sbjct: 225 RAKERKM 231
>gi|255755657|dbj|BAH96554.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 235
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
Q+ LEK + ++ Y T E + + ++Q+ LTE+QV WF +RR+K K+
Sbjct: 164 QIYELEKAFQQNAYLTRERRQKYSQQLNLTERQVKIWFQNRRMKSKK 210
>gi|70608220|gb|AAZ04406.1| bix-like [Xenopus (Silurana) tropicalis]
Length = 399
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
+ + KVS RR +T P+ + LE+++ + YP + ++A Q+GL E ++ W
Sbjct: 71 TNQQKVSPTPTSNRRKRTVYSPSDLAQLEQYFRANMYPDIHQREELAGQMGLPESRIQVW 130
Query: 60 FCHRRLKEKR 69
F +RR K KR
Sbjct: 131 FQNRRSKAKR 140
>gi|307187352|gb|EFN72480.1| Homeotic protein empty spiracles [Camponotus floridanus]
Length = 481
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
+P+Q++ LE + ++ Y + Q+A+ + LTE QV WF +RR K KR+ +E
Sbjct: 358 SPSQLLKLEHAFEKNHYVVGAERKQLAQTLSLTETQVKVWFQNRRTKHKRMQQEE 412
>gi|268533120|ref|XP_002631688.1| C. briggsae CBR-COG-1 protein [Caenorhabditis briggsae]
Length = 261
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
M N +S++K R T Q+ LE+ + + KY ++Q+A+++ ++E QV WF
Sbjct: 164 MQLSPNSLSMQKKQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKVWF 223
Query: 61 CHRRLK-EKRLSVDEAFV--GGRQDRS 84
+RR K K+ + D A V G D+S
Sbjct: 224 QNRRTKWRKKEAADNALVKRGASGDKS 250
>gi|198429111|ref|XP_002127499.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 456
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 8 VSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+ +EK ++++ P Q+ ALEK + + KY ++++A + +TE QV WF +R
Sbjct: 173 IVMEKYGRKKHTRPTFSGQQIFALEKTFEQSKYLAGPERARLAYSLAMTESQVKVWFQNR 232
Query: 64 RLK-EKRLSVDEAFVGGRQD 82
R K KR + + A RQD
Sbjct: 233 RTKWRKRHAAEMATAKKRQD 252
>gi|3417236|emb|CAA64694.1| homeodomain protein [Girardia tigrina]
Length = 205
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGG 79
T Q++ LEK ++ +KY T + ++++A+ + L+E QV WF +RR+K K+ D G
Sbjct: 89 TRQQILELEKEFHFNKYLTRKRRNEIAQSLQLSESQVKIWFQNRRMKWKK---DHHLPGN 145
Query: 80 RQDRSS 85
+Q S+
Sbjct: 146 KQRLST 151
>gi|260818521|ref|XP_002604431.1| H2.0-like homeobox [Branchiostoma floridae]
gi|229289758|gb|EEN60442.1| H2.0-like homeobox [Branchiostoma floridae]
Length = 389
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q LEK ++ KY T+ + Q+A +GLT+ QV WF +RR+K + ++ RQ+
Sbjct: 232 QRKGLEKRFDIQKYVTKPDRKQLASMLGLTDAQVKVWFQNRRMKWRNAMKEKE----RQE 287
Query: 83 RSSGVIQDRGSGLRQDSCGSTKQG 106
R D+ +G + D CG G
Sbjct: 288 R------DKAAGDKPDPCGDQLAG 305
>gi|110339121|gb|ABG67824.1| NK-like 16, partial [Nematostella vectensis]
Length = 60
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T +Q+ LEK + KY + +S++A+ +GLT+ QV WF +RR+K KR
Sbjct: 9 TESQISELEKRFQSQKYLGSKERSELADTLGLTDTQVKTWFQNRRMKLKR 58
>gi|256052504|ref|XP_002569806.1| homeobox protein [Schistosoma mansoni]
Length = 638
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 35/50 (70%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T Q++ LEK ++ Y + + ++AEQ+GL+E+Q+ WF +RR+K+K+
Sbjct: 178 TNLQLIELEKEFHYSNYLGQPRRLELAEQLGLSERQIKIWFQNRRMKQKK 227
>gi|193669354|ref|XP_001948495.1| PREDICTED: homeobox protein EMX1-like [Acyrthosiphon pisum]
Length = 356
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K I+ + +P+Q++ LE + ++ Y + Q+A+ + LTE QV WF +RR K KR+
Sbjct: 226 KRIRTAF-SPSQLLKLEHAFEKNHYVVGAERKQLAQSLSLTETQVKVWFQNRRTKHKRMQ 284
Query: 72 VDE 74
+E
Sbjct: 285 QEE 287
>gi|332692473|gb|AEE90155.1| Homeobox A13a, partial [Anguilla anguilla]
Length = 171
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 39/56 (69%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR T AQ+ LE+ Y +K+ T++ + +++ Q L+E+QV+ WF +RR+KEK++
Sbjct: 108 KRVPYTKAQLKELEREYAANKFITKDKRRRISAQTSLSERQVTIWFQNRRVKEKKV 163
>gi|270015040|gb|EFA11488.1| hypothetical protein TcasGA2_TC014200 [Tribolium castaneum]
Length = 331
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 11 EKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR K
Sbjct: 227 DKDTKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKVWFQNRRTK 286
Query: 67 EKRLSVDEAFVGGRQ--------DRSSGVIQD 90
++ E R+ D +S VI D
Sbjct: 287 WRKKHAAEMATAKRKQEVLDNQTDENSDVISD 318
>gi|21358053|ref|NP_652614.1| HGTX [Drosophila melanogaster]
gi|6969438|gb|AAF33780.1|AF220236_1 GTX/Nkx6B-like homeodomain protein [Drosophila melanogaster]
gi|23093480|gb|AAF49729.3| HGTX [Drosophila melanogaster]
gi|54650596|gb|AAV36877.1| RE53769p [Drosophila melanogaster]
gi|66571254|gb|AAY51592.1| IP01125p [Drosophila melanogaster]
gi|220943318|gb|ACL84202.1| HGTX-PA [synthetic construct]
gi|220943456|gb|ACL84271.1| HGTX-PA [synthetic construct]
gi|220953300|gb|ACL89193.1| HGTX-PA [synthetic construct]
Length = 513
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 3 SEENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
S ++ S +K+ K+++ P Q+ ALEK + + KY ++++A +G++E QV
Sbjct: 379 SHQHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKV 438
Query: 59 WFCHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQS 118
WF +RR K ++ E R+ QD G C T D S+D E +
Sbjct: 439 WFQNRRTKWRKRHAAEMATAKRK-------QDDMGGDNDGDCSETMDSDNESLDMGESPA 491
Query: 119 RMLYC 123
+ C
Sbjct: 492 QNKRC 496
>gi|393905638|gb|EFO22714.2| homeobox protein lin-39, partial [Loa loa]
Length = 101
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
T QV+ LEK ++ +KY T + + ++A + LTE+QV WF +RR+K K+ + D+
Sbjct: 15 TRNQVLELEKEFHFNKYLTRKRRIEIAHSLMLTERQVKIWFQNRRMKHKKENKDK 69
>gi|254692760|dbj|BAH23875.2| transcription factor Hox6 [Balanoglossus misakiensis]
Length = 240
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
R+ T Q + LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K K+
Sbjct: 155 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKK 208
>gi|259013408|ref|NP_001158411.1| homeobox 6 [Saccoglossus kowalevskii]
gi|116574504|gb|ABK00020.1| hox 6 [Saccoglossus kowalevskii]
Length = 242
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
R+ T Q + LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K K+
Sbjct: 152 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLGLTERQIKIWFQNRRMKWKK 205
>gi|88604706|gb|ABD46724.1| homeobox protein proboscipedia [Endeis spinosa]
Length = 558
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR++
Sbjct: 210 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMRH 269
Query: 68 KRLS 71
KR S
Sbjct: 270 KRQS 273
>gi|301128890|emb|CBL59353.1| HoxB2 [Scyliorhinus canicula]
Length = 359
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ E++ S + ++ Y T Q++ LEK ++ +KY + ++A + LTE+QV WF
Sbjct: 123 IQGEQDNSSSSRRLRTAY-TNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWF 181
Query: 61 CHRRLKEKR 69
+RR+K KR
Sbjct: 182 QNRRMKHKR 190
>gi|34304665|gb|AAQ63438.1| Hox12 [Oikopleura dioica]
Length = 60
Score = 45.4 bits (106), Expect = 0.065, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KRR T Q+ LE + ++ T E + +++ ++ LT++QV WF +RR+KEKRL
Sbjct: 4 KRRPYTKLQIQELETEFRRTEFVTREQRQEISRRLNLTDRQVKIWFQNRRMKEKRL 59
>gi|220898217|gb|ACL81470.1| HoxD8 [Latimeria menadoensis]
Length = 234
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ +GLTE+Q+ WF +RR+K K+ + + F RQ+
Sbjct: 152 QTLELEKEFLFNPYLTRKRRIEVSHSLGLTERQIKIWFQNRRMKWKKENNKDTFSTSRQE 211
Query: 83 RSSGVIQDRGSGLRQDSCGST 103
R ++ + Q+ +T
Sbjct: 212 REECEVKKEPENVEQNKAENT 232
>gi|148234805|ref|NP_001081704.1| homeobox protein pv.1 [Xenopus laevis]
gi|82189792|sp|O42173.1|PV1_XENLA RecName: Full=Homeobox protein pv.1; AltName:
Full=Posterior-ventral 1 transcription factor
gi|2331048|gb|AAB71353.1| posterior-ventral 1 transcription factor [Xenopus laevis]
Length = 282
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 4 EENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
E K L+++++ + TP Q+ LE+ +N+ +Y + ++A + L+E QV WF +R
Sbjct: 122 ESPKSDLQRHLRTAF-TPQQISKLEQAFNKQRYLGASERKKLATSLRLSEIQVKTWFQNR 180
Query: 64 RLKEKRLSVDE 74
R+K KR D+
Sbjct: 181 RMKLKRQIQDQ 191
>gi|405977546|gb|EKC41989.1| LIM/homeobox protein Lhx3 [Crassostrea gigas]
Length = 432
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVD 73
R T Q+ AL++ YNE P ++ Q++ + GL + V WF +RR KEKRL D
Sbjct: 217 RTTITAKQLEALKRAYNESPKPARHVREQLSAETGLDMRVVQVWFQNRRAKEKRLKKD 274
>gi|402578101|gb|EJW72056.1| homeobox domain-containing protein, partial [Wuchereria
bancrofti]
Length = 115
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 4 EENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+E S ++N ++ + T V L +FY ++KYPT E K ++A L Q+S WF +R
Sbjct: 31 QETIYSFKENARKLWLTDLLVKILRQFYRKNKYPTLEDKKEIARITDLKIIQISNWFKNR 90
Query: 64 RLKEK 68
R ++K
Sbjct: 91 RQRDK 95
>gi|324536549|gb|ADY49469.1| Homeobox protein, partial [Ascaris suum]
Length = 162
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+R TP Q LEK Y +Y + +AE +GL+E QV WF +RR KEKR
Sbjct: 59 QRTTFTPTQADTLEKEYLTDQYMPRTRRILIAESLGLSEGQVKTWFQNRRAKEKR 113
>gi|195449567|ref|XP_002072128.1| GK22678 [Drosophila willistoni]
gi|194168213|gb|EDW83114.1| GK22678 [Drosophila willistoni]
Length = 476
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K I+ + +P+Q++ LE + ++Y + +A+ + L+E QV WF +RR K KR+
Sbjct: 372 KRIRTAF-SPSQLLKLEHAFESNQYVVGAERKALAQSLNLSETQVKVWFQNRRTKHKRMQ 430
Query: 72 VDEAFVGGRQDR 83
++ GG DR
Sbjct: 431 QEDEKGGGSSDR 442
>gi|313243080|emb|CBY39775.1| unnamed protein product [Oikopleura dioica]
Length = 226
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 3 SEENKVSLEKNIKR-----RYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEK 54
S+ENK +L N++R + +TP Q+ LE + + +Y T +++ + ++ LTE
Sbjct: 141 SDENKPTLVSNLRRHKRDRKPRTPFSSEQLERLESRFADKQYLTIPERAEFSNELSLTET 200
Query: 55 QVSGWFCHRRLKEKRLS 71
QV WF +RR K+KRL+
Sbjct: 201 QVKIWFQNRRAKQKRLA 217
>gi|301623759|ref|XP_002941181.1| PREDICTED: homeobox protein Mix.1-like [Xenopus (Silurana)
tropicalis]
Length = 358
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
+ + KVS RR +T P+ + LE+++ + YP + ++A Q+GL E ++ W
Sbjct: 29 TNQQKVSPTPTSNRRKRTVYSPSDLAQLEQYFRANMYPDIHQREELAGQMGLPESRIQVW 88
Query: 60 FCHRRLKEKR 69
F +RR K KR
Sbjct: 89 FQNRRSKAKR 98
>gi|217035837|gb|ACJ74390.1| Hox13 [Branchiostoma lanceolatum]
Length = 271
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 36/48 (75%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q+ LE+ Y +++Y + E + ++++++ LT++QV WF +RR+K+KRL
Sbjct: 216 QLSVLEQEYIQNRYVSRETRLELSQRLNLTDRQVKIWFQNRRMKQKRL 263
>gi|185133866|ref|NP_001118104.1| caudal-type homeobox protein 1 [Oncorhynchus mykiss]
gi|38046362|gb|AAR09044.1| caudal-type homeobox protein 1 [Oncorhynchus mykiss]
Length = 269
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ ++Y T KS++A +GL+E+QV WF +RR KE++L
Sbjct: 161 QRLELEKEFHFNRYITIRRKSELAGNLGLSERQVKIWFQNRRAKERKL 208
>gi|410934539|gb|AFV93986.1| homeodomain-containing protein Hox12, partial [Branchiostoma
lanceolatum]
Length = 129
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 22 AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV---DEAF 76
Q++ LEK + + Y T E + ++A ++ LT++QV WF +RR+K KR+ +EAF
Sbjct: 59 VQLLELEKEFLYNMYITREQRGEIARKVNLTDRQVKIWFQNRRMKMKRMKQRHEEEAF 116
>gi|254692756|dbj|BAH23873.2| transcription factor Hox4 [Balanoglossus misakiensis]
Length = 209
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
QV+ LEK ++ ++Y T + ++A +GLTE+QV WF +RR+K K+
Sbjct: 130 QVLELEKEFHFNRYLTRRRRIEIAHALGLTERQVKIWFQNRRMKWKK 176
>gi|358341001|dbj|GAA48782.1| homeobox even-skipped homolog protein 1 [Clonorchis sinensis]
Length = 490
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 13 NIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
++ +RY+T Q+ LE+ Y +Y + +S++A+ + L E + WF +RR+KEKR
Sbjct: 205 DLLKRYRTSYSQQQLRILEQTYQAERYISRPQRSKLAQDLKLPENTIKVWFQNRRMKEKR 264
Query: 70 LSVDEAFVGGR 80
S+ + GR
Sbjct: 265 QSLMLPTLAGR 275
>gi|144369357|dbj|BAF56226.1| Six-C [Ephydatia fluviatilis]
Length = 451
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 25 MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
+ L ++Y ++ YP+ K Q+AEQ GLT QVS WF +RR +++
Sbjct: 156 VVLRQWYTKNPYPSPREKRQLAEQTGLTTTQVSNWFKNRRQRDR 199
>gi|212275139|ref|NP_001130421.1| uncharacterized protein LOC100191517 [Zea mays]
gi|194689074|gb|ACF78621.1| unknown [Zea mays]
gi|194700286|gb|ACF84227.1| unknown [Zea mays]
gi|238011534|gb|ACR36802.1| unknown [Zea mays]
Length = 290
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
K+R TP QV+ LE+ + E E K+++A ++GL +QV+ WF +RR + K ++
Sbjct: 34 KKRRLTPEQVLLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLER 93
Query: 75 AF 76
F
Sbjct: 94 DF 95
>gi|390332127|ref|XP_782451.3| PREDICTED: homeobox protein MOX-1-like [Strongylocentrotus
purpuratus]
Length = 343
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK-------- 66
+R T Q+ LE +N H Y T + ++A + LTE+QV WF +RR+K
Sbjct: 200 ERTAFTKEQIRELENEFNHHNYLTRLRRYEIAVTLNLTERQVKVWFQNRRMKWKRCKGAR 259
Query: 67 -----EKRLSVDEAFVGGRQDRSSGV 87
EKRL E +G SSG+
Sbjct: 260 ERELAEKRLQAMEVKLGLPPGSSSGL 285
>gi|222876504|gb|ACM69149.1| HoxPost protein [Isodiametra pulchra]
Length = 96
Score = 45.4 bits (106), Expect = 0.069, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KRR T Q + LEK + + Y T E + ++A + LT++QV WF +RR+K K+
Sbjct: 12 KRRPYTKTQTLELEKEFLYNTYITRERRLEIARSLSLTDRQVKIWFQNRRMKNKK 66
>gi|88604708|gb|ABD46725.1| homeobox protein proboscipedia [Nymphon gracile]
Length = 187
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 8 ENGLPRRLRTAYTNNQLLELEKEFHFNKYLCRPRRIEIAASLELTERQVKVWFQNRRMKH 67
Query: 68 KRLSV 72
KR S
Sbjct: 68 KRQST 72
>gi|110555649|emb|CAJ56096.1| fushi tarazu [Glomeris marginata]
Length = 365
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R+ T Q + LEK ++ ++Y + ++A + LTE+QV WF +RR+K KR
Sbjct: 265 RQTYTRFQTLELEKEFHSNRYLNRRRRIEIATSLTLTERQVKIWFQNRRMKAKREPKMVV 324
Query: 76 FVGGRQDRSSGVI 88
GG Q+ V+
Sbjct: 325 HAGGNQEDHHQVL 337
>gi|19528431|gb|AAL90330.1| RE18506p [Drosophila melanogaster]
Length = 480
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 3 SEENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
S ++ S +K+ K+++ P Q+ ALEK + + KY ++++A +G++E QV
Sbjct: 346 SHQHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKV 405
Query: 59 WFCHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQS 118
WF +RR K ++ E R+ QD G C T D S+D E +
Sbjct: 406 WFQNRRTKWRKRHAAEMATAKRK-------QDDMGGDNDGDCSETMDSDNESLDMGESPA 458
Query: 119 RMLYC 123
+ C
Sbjct: 459 QNKRC 463
>gi|319740945|gb|ADV68993.1| gastrulation brain homeobox transcription factor [Patiria miniata]
Length = 350
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+R T Q++ LEK ++ KY T +SQ+A + L+E QV WF +RR K KRL
Sbjct: 226 RRTAFTSDQLLELEKEFHSKKYLTLSERSQIARSLHLSEVQVKIWFQNRRAKWKRL 281
>gi|307203496|gb|EFN82547.1| Homeotic protein empty spiracles [Harpegnathos saltator]
Length = 471
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K I+ + +P+Q++ LE + ++ Y + Q+A+ + LTE QV WF +RR K KR+
Sbjct: 335 KRIRTAF-SPSQLLKLEHAFEKNHYVVGAERKQLAQALSLTETQVKVWFQNRRTKHKRML 393
Query: 72 VDE 74
+E
Sbjct: 394 QEE 396
>gi|38016607|gb|AAR07637.1| transcription factor Hox6 [Ptychodera flava]
Length = 239
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
R+ T Q + LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K K+
Sbjct: 154 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKK 207
>gi|405960913|gb|EKC26783.1| Homeobox expressed in ES cells 1 [Crassostrea gigas]
Length = 221
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 3 SEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCH 62
SE KV IK R Q+ LE+ + H+YP E +AE++G++ ++V+ WF +
Sbjct: 4 SEPKKVPTRSRIKYRQD---QLETLEESFRSHQYPDSESIENLAEKVGVSSERVAIWFQN 60
Query: 63 RRLKEKRLSVD 73
RR K KR S D
Sbjct: 61 RRAKFKRESKD 71
>gi|357444035|ref|XP_003592295.1| Homeodomain protein (HB2) [Medicago truncatula]
gi|355481343|gb|AES62546.1| Homeodomain protein (HB2) [Medicago truncatula]
Length = 842
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 15 KRRYK--TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
K+RY TP Q+ LE F+ E +P E+ + +++++GL KQV WF +RR + K
Sbjct: 57 KKRYHRHTPNQIQELESFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMK 112
>gi|224471041|dbj|BAH23877.1| transcription factor Hox8 [Balanoglossus misakiensis]
Length = 211
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 41/62 (66%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
V +K R+ T Q + LEK ++ ++Y T + + ++++ +GL+E+Q+ WF +RR+K+
Sbjct: 119 VGTDKRRGRQTYTRFQTLELEKEFHFNQYLTRKRRIEISQIVGLSERQIKIWFQNRRMKQ 178
Query: 68 KR 69
K+
Sbjct: 179 KK 180
>gi|195494329|ref|XP_002094793.1| GE20015 [Drosophila yakuba]
gi|194180894|gb|EDW94505.1| GE20015 [Drosophila yakuba]
Length = 608
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 3 SEENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
S ++ S +K+ K+++ P Q+ ALEK + + KY ++++A +G++E QV
Sbjct: 473 SHQHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKV 532
Query: 59 WFCHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQS 118
WF +RR K ++ E R+ QD G C T D S+D E +
Sbjct: 533 WFQNRRTKWRKRHAAEMATAKRK-------QDDMGGDNDGDCSETMDSDNESLDMGESPA 585
Query: 119 RMLYC 123
+ C
Sbjct: 586 QNKRC 590
>gi|353231111|emb|CCD77529.1| putative emx homeobox protein [Schistosoma mansoni]
Length = 298
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVD 73
+PAQ+ LE + ++ Y + + +A + LTE QV WF +RR K KRL D
Sbjct: 59 SPAQLFQLESAFEKNHYVVGQERKDLATDLNLTETQVKVWFQNRRTKYKRLHTD 112
>gi|380807101|gb|AFE75426.1| POU domain, class 2, transcription factor 1 isoform 1, partial
[Macaca mulatta]
Length = 273
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 9/62 (14%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NI+ +ALEK + E++ PT E + +A+Q+ + ++ + WFC+RR K
Sbjct: 221 RTSIETNIR---------VALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK 271
Query: 67 EK 68
EK
Sbjct: 272 EK 273
>gi|38016613|gb|AAR07640.1| transcription factor Hox11/13b [Ptychodera flava]
Length = 193
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
Q+ LEK + ++ Y T E + + ++Q+ LTE+QV WF +RR+K K+
Sbjct: 127 QIYELEKAFQQNAYLTRERRQKYSQQLNLTERQVKIWFQNRRMKSKK 173
>gi|126326347|ref|XP_001368563.1| PREDICTED: homeobox protein Hox-D8-like [Monodelphis domestica]
Length = 307
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ +GLTE+QV WF +RR+K K+ + + F RQ+
Sbjct: 225 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPVSRQE 284
Query: 83 RSSGVIQDRGSGLRQD 98
G + L +D
Sbjct: 285 GKEGETKKEAHDLEED 300
>gi|541626|gb|AAC46491.1| fushi-tarazu [Tribolium castaneum]
gi|1093401|prf||2103337A fushi tarazu gene
Length = 322
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
R+ T Q + LEK ++ +KY T + ++AE + LTE+Q+ WF +RR+K K+
Sbjct: 187 RQTYTRYQTLELEKEFHFNKYLTRRRRIEIAESLRLTERQIKIWFQNRRMKAKK 240
>gi|223973911|gb|ACN31143.1| unknown [Zea mays]
gi|223974081|gb|ACN31228.1| unknown [Zea mays]
gi|238011808|gb|ACR36939.1| unknown [Zea mays]
Length = 330
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
K+R TP QV+ LE+ + E E K+++A ++GL +QV+ WF +RR + K ++
Sbjct: 74 KKRRLTPEQVLLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLER 133
Query: 75 AF 76
F
Sbjct: 134 DF 135
>gi|195623632|gb|ACG33646.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
gi|195624474|gb|ACG34067.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
Length = 331
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
K+R TP QV+ LE+ + E E K+++A ++GL +QV+ WF +RR + K ++
Sbjct: 74 KKRRLTPEQVLLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLER 133
Query: 75 AF 76
F
Sbjct: 134 DF 135
>gi|148222260|ref|NP_001091390.1| homeobox protein vent1 [Xenopus laevis]
gi|82217567|sp|Q91926.1|VENT1_XENLA RecName: Full=Homeobox protein vent1; Short=Xvent-1
gi|1061303|emb|CAA63437.1| Xvent-1 [Xenopus laevis]
gi|213625103|gb|AAI69830.1| Xvent-1 protein [Xenopus laevis]
Length = 264
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
+E+ + S + +++RR +T P Q+ LE+ +N+ +Y + ++A + L+E QV W
Sbjct: 117 TEQREKSPKSDLQRRLRTAFTPQQISKLEQAFNKQRYLGAPERKKLATSLQLSEIQVKTW 176
Query: 60 FCHRRLKEKR 69
F +RR+K KR
Sbjct: 177 FQNRRMKLKR 186
>gi|359754119|gb|AEV59539.1| HOXD8 [Macropus eugenii]
Length = 308
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ +GLTE+QV WF +RR+K K+ + + F RQ+
Sbjct: 226 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPVSRQE 285
Query: 83 RSSGVIQDRGSGLRQD 98
G + L +D
Sbjct: 286 GKEGETKKEAHDLEED 301
>gi|255755651|dbj|BAH96551.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 259
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 41/62 (66%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
V +K R+ T Q + LEK ++ ++Y T + + ++++ +GL+E+Q+ WF +RR+K+
Sbjct: 166 VGTDKRRGRQTYTRFQTLELEKEFHFNQYLTRKRRIEISQIVGLSERQIKIWFQNRRMKQ 225
Query: 68 KR 69
K+
Sbjct: 226 KK 227
>gi|255755647|dbj|BAH96549.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 243
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
R+ T Q + LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K K+
Sbjct: 156 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKK 209
>gi|189233719|ref|XP_969907.2| PREDICTED: similar to HGTX CG13475-PA [Tribolium castaneum]
Length = 295
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 8 VSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+ +K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +R
Sbjct: 188 IGPDKDTKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKVWFQNR 247
Query: 64 RLKEKRLSVDEAFVGGRQ--------DRSSGVIQD 90
R K ++ E R+ D +S VI D
Sbjct: 248 RTKWRKKHAAEMATAKRKQEVLDNQTDENSDVISD 282
>gi|51091201|dbj|BAD35894.1| putative homeobox [Oryza sativa Japonica Group]
Length = 734
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 15 KRRYK--TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR--LKEKRL 70
++RY TP Q+ LE + E +P E ++Q++ ++GL +Q+ WF +RR +K +
Sbjct: 16 RKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWFQNRRTQMKAQHE 75
Query: 71 SVDEAFVGGRQDR 83
D F+ D+
Sbjct: 76 RADNCFLRAENDK 88
>gi|322796216|gb|EFZ18792.1| hypothetical protein SINV_12292 [Solenopsis invicta]
Length = 324
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGG 79
T Q++ LE+ + + Y + + ++A + L+EKQV WF +RR+K K+ E G
Sbjct: 121 TSTQLLELEREFASNMYLSRLRRIEIATNLRLSEKQVKIWFQNRRVKYKK----EDLPSG 176
Query: 80 RQDRSSGVIQDRGSGLRQDSCG 101
+ + + R G R+DSCG
Sbjct: 177 QSQKCCCL---RTCGKRKDSCG 195
>gi|256074914|ref|XP_002573767.1| emx homeobox protein [Schistosoma mansoni]
Length = 193
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVD 73
+PAQ+ LE + ++ Y + + +A + LTE QV WF +RR K KRL D
Sbjct: 59 SPAQLFQLESAFEKNHYVVGQERKDLATDLNLTETQVKVWFQNRRTKYKRLHTD 112
>gi|400294533|gb|AFP81698.1| ventral anterior homeobox protein [Convolutriloba longifissura]
Length = 439
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+R TP Q+ LEK + ++Y + Q+A +GLTE QV WF +RR K KR
Sbjct: 237 ERTSFTPEQLFRLEKEFTHNQYMVGRDRGQLATCLGLTETQVKVWFQNRRTKYKR 291
>gi|296193234|ref|XP_002744411.1| PREDICTED: homeobox protein CDX-1 [Callithrix jacchus]
Length = 265
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212
>gi|390351591|ref|XP_783280.3| PREDICTED: uncharacterized protein LOC577994 [Strongylocentrotus
purpuratus]
Length = 394
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 40/62 (64%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
+ ++ R+ T AQ + LEK ++ ++Y T + + ++A+ + L+E+Q+ WF +RR+K
Sbjct: 288 IGTDRKRGRQTYTRAQTLELEKEFHYNRYLTRKRRIEIAQAVCLSERQIKIWFQNRRMKW 347
Query: 68 KR 69
K+
Sbjct: 348 KK 349
>gi|313216973|emb|CBY38173.1| unnamed protein product [Oikopleura dioica]
Length = 251
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 3 SEENKVSLEKNIKR-----RYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEK 54
S+ENK +L N++R + +TP Q+ LE + + +Y T +++ + ++ LTE
Sbjct: 138 SDENKPTLVSNLRRHKRDRKPRTPFSSEQLERLESRFADKQYLTIPERAEFSNELSLTET 197
Query: 55 QVSGWFCHRRLKEKRLSVDE 74
QV WF +RR K+KRL+ E
Sbjct: 198 QVKIWFQNRRAKQKRLAEAE 217
>gi|225559641|gb|EEH07923.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 732
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
+N+ R T QV LE + H P +K Q+A Q LT +V+ WF +RR K K+
Sbjct: 67 ENLSRPRLTKDQVDTLEAQFQAHPKPNSNVKRQLAAQTNLTLPRVANWFQNRRAKAKQQK 126
Query: 72 VDEAFV------GGRQDRSSGVIQDRGSGLRQ-----DSCGSTKQGD--YRSIDPREVQ 117
E F G Q +++ Q G+ Q S T+Q D S++P EV+
Sbjct: 127 RQEEFERMQASGNGEQWKNNDTKQKEGASKEQSERLESSATPTQQPDPSSSSLNPSEVE 185
>gi|187611421|sp|Q69T58.2|ROC8_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC8; AltName:
Full=GLABRA 2-like homeobox protein 8; AltName:
Full=HD-ZIP protein ROC8; AltName: Full=Homeodomain
transcription factor ROC8; AltName: Full=Protein RICE
OUTERMOST CELL-SPECIFIC 8
Length = 710
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 15 KRRYK--TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR--LKEKRL 70
++RY TP Q+ LE + E +P E ++Q++ ++GL +Q+ WF +RR +K +
Sbjct: 16 RKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWFQNRRTQMKAQHE 75
Query: 71 SVDEAFVGGRQDR 83
D F+ D+
Sbjct: 76 RADNCFLRAENDK 88
>gi|146217159|gb|ABQ10643.1| homeodomain protein Tlx [Platynereis dumerilii]
Length = 325
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFC 61
H +N+ ++ R T Q++ LEK ++ KY +S +A+ + +T+ QV WF
Sbjct: 180 HPYQNRTPPKRKKPRTSFTRLQIIELEKRFHRQKYLASAERSALAKSLKMTDAQVKTWFQ 239
Query: 62 HRRLKEKRLSVDE---------AFVGGRQDRSSGVI 88
+RR K +R + +E F+ G Q + G I
Sbjct: 240 NRRTKWRRQTAEEREAERQAASRFMLGLQAEAGGSI 275
>gi|157136640|ref|XP_001663803.1| emx homeobox protein [Aedes aegypti]
gi|108880989|gb|EAT45214.1| AAEL003506-PA [Aedes aegypti]
Length = 353
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R +P+Q++ LE + + Y + Q+A+ + L+E QV WF +RR K KR+ +E
Sbjct: 248 RTAFSPSQLLKLEHAFESNHYVVGAERKQLAQNLNLSETQVKVWFQNRRTKHKRMQQEEG 307
Query: 76 FVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSID 112
G D++ G SC + ++ +D
Sbjct: 308 KSGESSDQNRSTSSPASGG----SCPEDDEDEFIDMD 340
>gi|354488421|ref|XP_003506368.1| PREDICTED: homeobox protein CDX-1-like [Cricetulus griseus]
Length = 125
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE++++
Sbjct: 20 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN 68
>gi|66394665|gb|AAY46192.1| NK6 transcription factor related locus 1 [Ovis aries]
Length = 106
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 8 VSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+ L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF +R
Sbjct: 2 ILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNR 61
Query: 64 RLK-EKRLSVDEAFVGGRQD 82
R K K+ + + A +QD
Sbjct: 62 RTKWRKKHAAEMATAKKKQD 81
>gi|449499800|ref|XP_002189840.2| PREDICTED: homeobox protein goosecoid isoform B-like [Taeniopygia
guttata]
Length = 276
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 8 VSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+ L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF +R
Sbjct: 140 ILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNR 199
Query: 64 RLKEKR 69
R K ++
Sbjct: 200 RTKWRK 205
>gi|397507928|ref|XP_003824432.1| PREDICTED: homeobox protein CDX-4 [Pan paniscus]
Length = 284
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 7 KVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+V+ + K +Y+ T Q + LEK ++ ++Y T + KS++A +GL+E+QV WF +R
Sbjct: 165 QVTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNR 224
Query: 64 RLKEKRL 70
R KE+++
Sbjct: 225 RAKERKM 231
>gi|242063218|ref|XP_002452898.1| hypothetical protein SORBIDRAFT_04g034580 [Sorghum bicolor]
gi|241932729|gb|EES05874.1| hypothetical protein SORBIDRAFT_04g034580 [Sorghum bicolor]
Length = 707
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 36/154 (23%)
Query: 15 KRRYK--TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV 72
K+RY TP Q+ LE + E +P E + Q++ ++GL +Q+ WF +RR
Sbjct: 18 KKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGLEPRQIKFWFQNRR-------- 69
Query: 73 DEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGD---YRSIDPREVQSRMLYCHDF--- 126
Q + RQD+C + D +I RE R + CH
Sbjct: 70 ---------------TQMKAQHERQDNCFLRAENDKIRCENIAMREAL-RTVICHTCGGP 113
Query: 127 PATDLAYD----RNQYAAHASERDDTSSESSSFL 156
P TD +D R + A E D SS +S +L
Sbjct: 114 PVTDDYFDEQKLRMENARLKEELDRVSSLTSKYL 147
>gi|119173966|ref|XP_001239344.1| hypothetical protein CIMG_08965 [Coccidioides immitis RS]
Length = 627
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
+N+ R T QV LE + PT +K Q+A Q LT +V+ WF +RR KEK+
Sbjct: 71 ENLSRPRLTKEQVETLEAQFQAQPKPTSNVKRQLAMQTNLTLPRVANWFQNRRAKEKQQK 130
Query: 72 VDEAF 76
E F
Sbjct: 131 RQEEF 135
>gi|332822308|ref|XP_527071.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein CDX-1 [Pan
troglodytes]
Length = 267
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 167 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 214
>gi|23893421|emb|CAD12362.1| nubbin [Cupiennius salei]
Length = 290
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 25 MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+ALEK + ++ PT E + +AE + + ++ V WFC+RR KEKR+
Sbjct: 176 LALEKAFLQNPKPTSEEIAMLAESLAMEKEVVRVWFCNRRQKEKRI 221
>gi|239915978|ref|NP_034010.3| homeobox protein CDX-1 [Mus musculus]
gi|1170313|sp|P18111.2|CDX1_MOUSE RecName: Full=Homeobox protein CDX-1; AltName: Full=Caudal-type
homeobox protein 1
Length = 268
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212
>gi|344250865|gb|EGW06969.1| hypothetical protein I79_013662 [Cricetulus griseus]
Length = 133
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE++++
Sbjct: 28 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN 76
>gi|167859581|gb|ACA04745.1| NK2/3/4-like [Amphimedon queenslandica]
Length = 359
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 22 AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
AQ+ LE+ Y KY T + Q+A + LTE QV WF +RR K KR ++ A
Sbjct: 123 AQIYELERRYALQKYLTAHEREQLANMLRLTETQVKIWFQNRRYKNKRQQLENA 176
>gi|88604718|gb|ABD46730.1| homeobox protein fushi tarazu [Endeis spinosa]
Length = 302
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
M S + S K ++ Y T Q + LEK ++ ++Y T + ++A +GL+E+Q+ WF
Sbjct: 198 MKSYTDNSSGPKRTRQTY-TRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWF 256
Query: 61 CHRRLKEKR 69
+RR+K K+
Sbjct: 257 QNRRMKAKK 265
>gi|449274402|gb|EMC83595.1| Homeobox protein Nkx-6.1, partial [Columba livia]
Length = 118
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 8 VSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+ L+K+ KR++ P Q+ ALEK + + KY ++++A +G+TE QV WF +R
Sbjct: 1 ILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNR 60
Query: 64 RLK-EKRLSVDEAFVGGRQD 82
R K K+ + + A +QD
Sbjct: 61 RTKWRKKHAAEMATAKKKQD 80
>gi|118344398|ref|NP_001072023.1| transcription factor protein [Ciona intestinalis]
gi|70570797|dbj|BAE06623.1| transcription factor protein [Ciona intestinalis]
Length = 492
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 16 RRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
+R++T P+Q+ LE+ ++ YP M+ ++A +IGLTE +V WF +RR K K+
Sbjct: 268 KRHRTRFAPSQLSELERSFSSTHYPDIFMREEIAHRIGLTESRVQVWFQNRRAKWKK 324
>gi|208965936|dbj|BAG72982.1| caudal type homeobox 1 [synthetic construct]
Length = 265
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212
>gi|168065542|ref|XP_001784709.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663724|gb|EDQ50473.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 360
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 215 VKRQLGRHYREDGPPLGVDFDPLPPGAFESPSGDPVNE-PFYVGNSR 260
V+ QL REDGPPLG +FDPLPP AF + P+ E P G SR
Sbjct: 242 VESQLCGPLREDGPPLGFEFDPLPPRAF---TELPMTEVPHTAGGSR 285
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 18 YKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
YK A + + + KYP+E + ++ + L++KQ+ WF HRR K++R +D+
Sbjct: 65 YKLKAVLFIISRAIAVEKYPSEATRQKLVRDLDLSDKQLQIWFTHRRYKDRRDGIDD 121
>gi|82621559|gb|ABB86451.1| anthox1-ANTP class homeobox protein, partial [Nematostella
vectensis]
gi|110338997|gb|ABG67762.1| HOXF, partial [Nematostella vectensis]
Length = 60
Score = 45.4 bits (106), Expect = 0.078, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 38/55 (69%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR T Q++ LEK ++ + + T+E +S++A Q+ LTE+QV WF +RR+K K+
Sbjct: 4 KRTAYTRKQLLELEKEFHFNHFLTKERRSEMASQLNLTERQVKIWFQNRRMKWKK 58
>gi|45775268|gb|AAS77231.1| transcription factor Hox2 [Lethenteron camtschaticum]
Length = 394
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL- 70
K ++ Y T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K KR
Sbjct: 158 KRLRTAY-TNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQT 216
Query: 71 -------SVDEAF 76
S DEAF
Sbjct: 217 QYKENQDSSDEAF 229
>gi|38016615|gb|AAR07641.1| transcription factor Hox11/13c [Ptychodera flava]
Length = 268
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 36/52 (69%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
Q+ LEK + ++ Y T + ++++A+ + LTE+QV WF +RR+K K+++ E
Sbjct: 165 QIFELEKEFQQNMYLTRDRRTRLAQTLNLTERQVKIWFQNRRMKLKKMTERE 216
>gi|940474|emb|CAA56695.1| cdx1 [Cyprinus carpio]
Length = 324
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ ++Y T KS++A +GL+E+QV WF +RR KE++L
Sbjct: 162 QRLELEKEFHFNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKL 209
>gi|86515424|ref|NP_001034539.1| fushi tarazu [Tribolium castaneum]
gi|13241680|gb|AAK16421.1|AF321227_1 Ftz [Tribolium castaneum]
Length = 290
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
R+ T Q + LEK ++ +KY T + ++AE + LTE+Q+ WF +RR+K K+
Sbjct: 187 RQTYTRYQTLELEKEFHFNKYLTRRRRIEIAESLRLTERQIKIWFQNRRMKAKK 240
>gi|1777772|gb|AAB40602.1| homeobox protein Cdx1 [Homo sapiens]
Length = 265
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212
>gi|397517764|ref|XP_003829076.1| PREDICTED: homeobox protein CDX-1 [Pan paniscus]
Length = 276
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 176 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 223
>gi|397490772|ref|XP_003816365.1| PREDICTED: uncharacterized protein LOC100967773 [Pan paniscus]
Length = 667
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 533 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 592
Query: 66 K-EKRLSVDEAFVGGRQD 82
K KR + + A +QD
Sbjct: 593 KWRKRHAAEMASAKKKQD 610
>gi|340370702|ref|XP_003383885.1| PREDICTED: hypothetical protein LOC100631730 [Amphimedon
queenslandica]
Length = 359
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 22 AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
AQ+ LE+ Y KY T + Q+A + LTE QV WF +RR K KR ++ A
Sbjct: 123 AQIYELERRYALQKYLTAHEREQLANMLRLTETQVKIWFQNRRYKNKRQQLENA 176
>gi|164521888|gb|ABY60733.1| zygote-expressed homeodomain protein [Chlamydomonas reinhardtii]
Length = 1767
Score = 45.1 bits (105), Expect = 0.079, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R KTP Q LE Y +++P+ + + + ++IGLTE++V WF +RR K+K +A
Sbjct: 18 RANKTPLQKEVLEASYQLNQHPSIDHRKALGDRIGLTEQEVQAWFTNRRRKDKLAEAKKA 77
>gi|18043503|gb|AAH19986.1| Caudal type homeo box 1 [Mus musculus]
Length = 268
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212
>gi|15450325|gb|AAK96032.1| homeodomain transcription factor Fushi tarazu [Tribolium castaneum]
gi|270002804|gb|EEZ99251.1| fushi tarazu [Tribolium castaneum]
Length = 290
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
R+ T Q + LEK ++ +KY T + ++AE + LTE+Q+ WF +RR+K K+
Sbjct: 187 RQTYTRYQTLELEKEFHFNKYLTRRRRIEIAESLRLTERQIKIWFQNRRMKAKK 240
>gi|443690447|gb|ELT92585.1| hypothetical protein CAPTEDRAFT_167382 [Capitella teleta]
Length = 476
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVD 73
Q+ ALE+ + EH+YP + ++A Q+ L E+ V WF +RR K KR S D
Sbjct: 243 QLEALEEVFGEHRYPDVYRREELANQLELKEEVVRVWFKNRRAKVKRESKD 293
>gi|426350678|ref|XP_004042897.1| PREDICTED: homeobox protein CDX-1 [Gorilla gorilla gorilla]
Length = 157
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 60 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 107
>gi|121114296|ref|NP_001795.2| homeobox protein CDX-1 [Homo sapiens]
gi|116241291|sp|P47902.2|CDX1_HUMAN RecName: Full=Homeobox protein CDX-1; AltName: Full=Caudal-type
homeobox protein 1
gi|7341292|gb|AAF61234.1|AF239666_1 CDX1 homeobox protein [Homo sapiens]
gi|119582149|gb|EAW61745.1| caudal type homeobox transcription factor 1 [Homo sapiens]
Length = 265
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212
>gi|45360949|ref|NP_988861.1| homeobox protein vent1 [Xenopus (Silurana) tropicalis]
gi|28200479|gb|AAO31758.1| vent-1 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
+E S + +++RR +T P Q+ LE+ +N+ +Y + ++A + L+E QV W
Sbjct: 115 TEHRSKSPKSDLQRRLRTAFTPQQITRLEQAFNKQRYLGASERKKLATSLQLSEIQVKTW 174
Query: 60 FCHRRLKEKRLSVDE 74
F +RR+K KR D+
Sbjct: 175 FQNRRMKLKRQIQDQ 189
>gi|255742470|gb|ACU32582.1| homeobox protein HoxD13 [Callorhinchus milii]
Length = 313
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR T Q+ LEK Y +K+ T+E + +++ LTE+QV+ WF +RR+KEK++
Sbjct: 249 KRVPYTKTQLKELEKEYATNKFITKEKRRRISTASNLTERQVTIWFQNRRVKEKKV 304
>gi|335283779|ref|XP_003354406.1| PREDICTED: homeobox protein CDX-1-like [Sus scrofa]
Length = 263
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 163 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 210
>gi|309163|gb|AAA37412.1| Cdx-1 homeobox protein [Mus musculus]
Length = 192
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 89 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 136
>gi|390351577|ref|XP_793141.2| PREDICTED: homeobox protein Hox-A7-like [Strongylocentrotus
purpuratus]
Length = 308
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 41/65 (63%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
+ ++ R+ T AQ + LEK ++ ++Y T + + ++A+ + L+E+Q+ WF +RR+K
Sbjct: 202 IGTDRKRGRQTYTRAQTLELEKEFHYNRYLTRKRRIEIAQAVCLSERQIKIWFQNRRMKW 261
Query: 68 KRLSV 72
K+ V
Sbjct: 262 KKERV 266
>gi|28629677|gb|AAO43044.1| HoxD8 [Latimeria menadoensis]
Length = 223
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ +GLTE+Q+ WF +RR+K K+ + + F RQ+
Sbjct: 141 QTLELEKEFLFNPYLTRKRRIEVSHSLGLTERQIKIWFQNRRMKWKKENNKDTFSTSRQE 200
Query: 83 RSSGVIQDRGSGLRQDSCGST 103
R ++ + Q+ +T
Sbjct: 201 REECEVKKEPENVEQNKAENT 221
>gi|335283791|ref|XP_003354410.1| PREDICTED: homeobox protein CDX-1-like [Sus scrofa]
Length = 263
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 163 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 210
>gi|270341324|gb|AAS07615.2| labial homeodomain protein 2 [Perionyx excavatus]
Length = 342
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 13 NIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
N+ R T Q+ LEK ++ ++Y T + ++A +GL E QV WF +RR+K+K+
Sbjct: 188 NLGRTNFTNKQLTELEKEFHFNRYLTRARRIEIASSLGLNETQVKIWFQNRRMKQKK 244
>gi|195446488|ref|XP_002070803.1| GK10829 [Drosophila willistoni]
gi|194166888|gb|EDW81789.1| GK10829 [Drosophila willistoni]
Length = 351
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 4 EENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
++ +V L+++ R T Q++ LE+ +N H+Y + ++A+++ L E+QV WF +R
Sbjct: 72 DQGRVKLKRS--RTAFTSVQLVELEREFNSHRYLYRTRRIEIAQRLSLCERQVKIWFQNR 129
Query: 64 RLKEKR 69
R+K K+
Sbjct: 130 RMKHKK 135
>gi|344265146|ref|XP_003404647.1| PREDICTED: homeobox protein CDX-1-like [Loxodonta africana]
Length = 265
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212
>gi|297710346|ref|XP_002831855.1| PREDICTED: homeobox protein CDX-4 [Pongo abelii]
Length = 284
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 7 KVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+V+ + K +Y+ T Q + LEK ++ ++Y T + KS++A +GL+E+QV WF +R
Sbjct: 165 QVTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNR 224
Query: 64 RLKEKRL 70
R KE+++
Sbjct: 225 RAKERKM 231
>gi|146286067|sp|A2T7H5.1|CDX1_PONPY RecName: Full=Homeobox protein CDX-1; AltName: Full=Caudal-type
homeobox protein 1
gi|124054131|gb|ABM89253.1| CDX1 [Pongo pygmaeus]
Length = 265
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212
>gi|402873066|ref|XP_003900407.1| PREDICTED: homeobox protein CDX-1 [Papio anubis]
Length = 265
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212
>gi|297676405|ref|XP_002816124.1| PREDICTED: homeobox protein CDX-1 [Pongo abelii]
Length = 265
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212
>gi|213624012|gb|AAI70527.1| PV.1 protein [Xenopus laevis]
gi|213626358|gb|AAI70526.1| PV.1 protein [Xenopus laevis]
Length = 282
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 4 EENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
E K L++ ++ + TP Q+ LE+ +N+ +Y + ++A + L+E QV WF +R
Sbjct: 122 ESPKSDLQRRLRTAF-TPQQISKLEQAFNKQRYLGASERKKLATSLRLSEIQVKTWFQNR 180
Query: 64 RLKEKRLSVDE 74
R+K KR D+
Sbjct: 181 RMKLKRQIQDQ 191
>gi|348522813|ref|XP_003448918.1| PREDICTED: homeobox protein Hox-A13a-like [Oreochromis niloticus]
gi|154183835|gb|ABS70775.1| Hoxa13a [Haplochromis burtoni]
Length = 299
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 38/56 (67%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR T Q+ LE+ Y +K+ T++ + +++ Q L+E+QV+ WF +RR+KEK++
Sbjct: 236 KRVPYTKVQLKELEREYAANKFITKDKRRRISAQTNLSERQVTIWFQNRRVKEKKI 291
>gi|109079345|ref|XP_001108012.1| PREDICTED: homeobox protein CDX-1 [Macaca mulatta]
Length = 265
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212
>gi|407415|emb|CAA53027.1| Hrox1 [Haliotis rufescens]
Length = 265
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
+S++ +R T Q+ LEK +N H Y T + ++A + L+E+QV WF +RR+K
Sbjct: 159 LSVKPRKERTAFTKHQIQELEKEFNVHNYLTRLRRYELAVSLELSERQVKVWFQNRRMKW 218
Query: 68 KRL 70
KR+
Sbjct: 219 KRV 221
>gi|218200030|gb|EEC82457.1| hypothetical protein OsI_26894 [Oryza sativa Indica Group]
Length = 1173
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 19 KTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
K+P Q+ LE+FY+E +YP E ++ A +GLT QV WF
Sbjct: 23 KSPLQIQMLERFYSEVQYPQSEDIAEYATSVGLTYNQVRIWF 64
>gi|6016294|sp|O42506.1|HXA9A_FUGRU RecName: Full=Homeobox protein Hox-A9a; Short=HoxA-9
gi|2341093|gb|AAB68684.1| homeodomain protein HOXA-9 [Takifugu rubripes]
gi|94482759|gb|ABF22379.1| homeobox protein HoxA9a [Takifugu rubripes]
Length = 283
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q++ LEK + + Y T + + +VA + LTE+QV WF +RR+K K+ + D
Sbjct: 219 KRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDG 278
Query: 75 A 75
A
Sbjct: 279 A 279
>gi|348587784|ref|XP_003479647.1| PREDICTED: homeobox protein Nkx-6.2-like, partial [Cavia porcellus]
Length = 361
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 10 LEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL 65
L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +RR
Sbjct: 135 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 194
Query: 66 K-EKRLSVDEAFVGGRQD 82
K KR + + A +QD
Sbjct: 195 KWRKRHAAEMASAKKKQD 212
>gi|222637469|gb|EEE67601.1| hypothetical protein OsJ_25152 [Oryza sativa Japonica Group]
Length = 1173
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 19 KTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
K+P Q+ LE+FY+E +YP E ++ A +GLT QV WF
Sbjct: 23 KSPLQIQMLERFYSEVQYPQSEDIAEYATSVGLTYNQVRIWF 64
>gi|402308|gb|AAA16447.1| caudal type homeobox-1 [Mus musculus]
Length = 192
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 89 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 136
>gi|255574032|ref|XP_002527933.1| homeobox protein, putative [Ricinus communis]
gi|223532666|gb|EEF34449.1| homeobox protein, putative [Ricinus communis]
Length = 713
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 15 KRRYK--TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
K+RY T QV LE + E +P E+ + Q++ ++GLT++Q+ WF +RR + K
Sbjct: 33 KKRYHRHTANQVQKLESMFKECPHPDEKQRLQLSRELGLTQRQIKFWFQNRRTQMK 88
>gi|443711321|gb|ELU05149.1| hypothetical protein CAPTEDRAFT_228137 [Capitella teleta]
Length = 506
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R T Q+ AL++ YNE P ++ Q++ + GL + V WF +RR KEKRL D
Sbjct: 276 RTTITAKQLEALKRAYNESPKPARHVREQLSAETGLDMRVVQVWFQNRRAKEKRLKKDAG 335
Query: 76 -------FVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDP 113
F + +RS+ + D GSG Q G + D + P
Sbjct: 336 RNRWSPYFRSVKSERSADELLD-GSGDEQTVEGFGSESDTFDMPP 379
>gi|383851796|ref|XP_003701417.1| PREDICTED: uncharacterized protein LOC100876009 [Megachile
rotundata]
Length = 377
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K I+ + +P+Q++ LE + ++ Y + Q+A+ + LTE QV WF +RR K KR+
Sbjct: 242 KRIRTAF-SPSQLLKLEHAFEKNHYVVGAERKQLAQALSLTETQVKVWFQNRRTKHKRMQ 300
Query: 72 VDE 74
+E
Sbjct: 301 QEE 303
>gi|123907341|sp|Q28ET4.1|VENT1_XENTR RecName: Full=Homeobox protein vent1; Short=Vent-1
gi|89269893|emb|CAJ83433.1| vent-1 [Xenopus (Silurana) tropicalis]
gi|197246643|gb|AAI68413.1| VENT homeobox 1, gene 2 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
+E S + +++RR +T P Q+ LE+ +N+ +Y + ++A + L+E QV W
Sbjct: 115 TEHRSKSPKSDLQRRLRTAFTPQQITRLEQAFNKQRYLGASERKKLATSLQLSEIQVKTW 174
Query: 60 FCHRRLKEKRLSVDE 74
F +RR+K KR D+
Sbjct: 175 FQNRRMKLKRQIQDQ 189
>gi|70570365|dbj|BAE06586.1| transcription factor protein [Ciona intestinalis]
Length = 347
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 1 MHSEENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQV 56
M + + +EK ++++ P Q+ ALEK + + KY ++++A + +TE QV
Sbjct: 57 MPGSPSTIVMEKYGRKKHTRPTFSGQQIFALEKTFEQSKYLAGPERARLAYSLAMTESQV 116
Query: 57 SGWFCHRRLK-EKRLSVDEAFVGGRQD 82
WF +RR K KR + + A RQD
Sbjct: 117 KVWFQNRRTKWRKRHAAEMATAKKRQD 143
>gi|348527940|ref|XP_003451477.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Oreochromis niloticus]
Length = 393
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E NIK M LEK + ++ P E + ++EQ+ + ++ V WFC+RR K
Sbjct: 255 RTSIETNIK---------MTLEKRFLDNPKPNSEEITLISEQLSMEKEVVRVWFCNRRQK 305
Query: 67 EKRLSVDEAFV 77
EKR+ A +
Sbjct: 306 EKRIYCPTATL 316
>gi|156120543|ref|NP_001095417.1| homeobox protein CDX-1 [Bos taurus]
gi|151554953|gb|AAI48006.1| CDX1 protein [Bos taurus]
Length = 265
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212
>gi|50253605|gb|AAT72005.1| vent1 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
+E S + +++RR +T P Q+ LE+ +N+ +Y + ++A + L+E QV W
Sbjct: 115 TEHRSKSPKSDLQRRLRTAFTPQQITRLEQAFNKQRYLGASERKKLATSLQLSEIQVKTW 174
Query: 60 FCHRRLKEKRLSVDE 74
F +RR+K KR D+
Sbjct: 175 FQNRRMKLKRQIQDQ 189
>gi|441432060|ref|YP_007354102.1| Homeodomain-containing protein [Acanthamoeba polyphaga
moumouvirus]
gi|440383140|gb|AGC01666.1| Homeodomain-containing protein [Acanthamoeba polyphaga
moumouvirus]
Length = 104
Score = 45.1 bits (105), Expect = 0.087, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ ++ K R T Q++ LE+FY +KY + + Q+A G+T KQ++ WF ++R
Sbjct: 35 RFKMDGKKKCRLFTTCQLLILEEFYKANKYISMDKSIQLARTFGVTRKQINTWFQNKRAH 94
Query: 67 EKRL 70
+KR
Sbjct: 95 DKRF 98
>gi|195019472|ref|XP_001984988.1| GH16803 [Drosophila grimshawi]
gi|193898470|gb|EDV97336.1| GH16803 [Drosophila grimshawi]
Length = 661
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 3 SEENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
S ++ S +K+ K+++ P Q+ ALEK + + KY ++++A +G++E QV
Sbjct: 527 SHQHHPSSDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKV 586
Query: 59 WFCHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQS 118
WF +RR K ++ E R+ QD G C T D S+D E +
Sbjct: 587 WFQNRRTKWRKRHAAEMATAKRK-------QDDMGGDNDGDCSETMDSDNESLDMGEAPT 639
Query: 119 R 119
+
Sbjct: 640 Q 640
>gi|118344364|ref|NP_001072005.1| transcription factor protein [Ciona intestinalis]
gi|70571157|dbj|BAE06689.1| transcription factor protein [Ciona intestinalis]
Length = 555
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 25 MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE-----KRLSVDEAFVGG 79
+AL++ Y ++KYPT + K +AE GL+ QVS WF +RR ++ K+ +V E GG
Sbjct: 234 LALKECYKKNKYPTPDDKRHLAEDTGLSILQVSNWFKNRRQRDRSPQNKKQNVWEQH-GG 292
Query: 80 RQDRSSGVIQDRGSGL--RQDSCGS 102
++ S + D S RQD GS
Sbjct: 293 KKCGSFSQLADHVSNFDSRQDCYGS 317
>gi|158936930|dbj|BAF91580.1| Msx protein [Milnesium tardigradum]
Length = 123
Score = 45.1 bits (105), Expect = 0.088, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
T Q+MALE+ Y +Y + +++ + Q+ LTE QV WF +RR K+KRL E
Sbjct: 1 TTQQLMALERKYRNKQYLSIAERAEFSTQLNLTETQVKIWFQNRRAKQKRLQEAE 55
>gi|426229896|ref|XP_004009019.1| PREDICTED: homeobox protein CDX-1 [Ovis aries]
Length = 265
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212
>gi|390599441|gb|EIN08837.1| hypothetical protein PUNSTDRAFT_134013 [Punctularia
strigosozonata HHB-11173 SS5]
Length = 204
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 13 NIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV 72
++K +P LE+F+ + YPT E K + +IG TEK+V+ WF +RR ++ R +
Sbjct: 38 SLKGHRASPEHAEKLERFFAANPYPTTEEKVGLGFEIGWTEKKVTVWFQNRRQRDTRTTA 97
>gi|385654535|gb|AFI62028.1| Hox-D11b [Anguilla japonica]
Length = 279
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 9 SLEKNIKRRYK-TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
SL K+ K+R T Q+ LE+ + + Y +E + Q++ + LT++QV WF +RR+KE
Sbjct: 203 SLLKSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKE 262
Query: 68 KRLSVD--EAFVG 78
K+L+ D + F G
Sbjct: 263 KKLNRDRLQYFTG 275
>gi|441596171|ref|XP_003266413.2| PREDICTED: homeobox protein CDX-1 [Nomascus leucogenys]
Length = 130
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 30 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 77
>gi|47223555|emb|CAF99164.1| unnamed protein product [Tetraodon nigroviridis]
Length = 189
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 19 KTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK-EKRLSVDEAFV 77
K+ AQ+ ALEK + + KY ++++A +G+TE QV WF +RR K K+ + + A
Sbjct: 70 KSSAQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATA 129
Query: 78 GGRQD 82
+QD
Sbjct: 130 KKKQD 134
>gi|350410204|ref|XP_003488979.1| PREDICTED: hypothetical protein LOC100748643 [Bombus impatiens]
Length = 635
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 11 EKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
+ + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K
Sbjct: 23 QNGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 82
Query: 68 KRLSVDE 74
KR ++ +
Sbjct: 83 KRQTLSK 89
>gi|410928718|ref|XP_003977747.1| PREDICTED: homeobox protein MOX-2-like [Takifugu rubripes]
Length = 269
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
+R T Q+ LE + H Y T + ++A + LTE+QV WF +RR+K KR+
Sbjct: 147 ERTAFTKEQIRELESEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVK--- 203
Query: 75 AFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCHDFPATDLAYD 134
GG+Q G+ RQ + K+G + P E + H + A D
Sbjct: 204 ---GGQQ----------GAAARQKELVNVKKG---ILLPSEFSGMVALPHSRNSPKTAED 247
Query: 135 RNQYAAHASERD 146
+Q + H+++ D
Sbjct: 248 DSQDSDHSADFD 259
>gi|410911106|ref|XP_003969031.1| PREDICTED: homeobox protein Hox-A9a-like isoform 2 [Takifugu
rubripes]
Length = 279
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q++ LEK + + Y T + + +VA + LTE+QV WF +RR+K K+ + D
Sbjct: 215 KRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDG 274
Query: 75 A 75
A
Sbjct: 275 A 275
>gi|391340170|ref|XP_003744418.1| PREDICTED: uncharacterized protein LOC100898132 [Metaseiulus
occidentalis]
Length = 413
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+R T Q++ LEK ++ KY + +SQ+A Q+ L+E QV WF +RR K KR+
Sbjct: 312 RRTAFTSEQLLELEKEFHSKKYLSLSERSQIAHQLKLSEVQVKIWFQNRRAKWKRV 367
>gi|391335219|ref|XP_003741993.1| PREDICTED: homeobox protein DLX-1-like [Metaseiulus occidentalis]
Length = 248
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 16 RRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
R+ +TP Q+ LE+ ++ Y + + ++A+ +GLTE QV WF +RR KEKR+
Sbjct: 166 RKPRTPFTTVQLATLERRFHSKHYLSNSDRIEIAKDLGLTETQVKIWFQNRRAKEKRI 223
>gi|218197780|gb|EEC80207.1| hypothetical protein OsI_22100 [Oryza sativa Indica Group]
Length = 613
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 15 KRRYK--TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR--LKEKRL 70
++RY TP Q+ LE + E +P E ++Q++ ++GL +Q+ WF +RR +K +
Sbjct: 16 RKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWFQNRRTQMKAQHE 75
Query: 71 SVDEAFVGGRQDR 83
D F+ D+
Sbjct: 76 RADNCFLRAENDK 88
>gi|217035838|gb|ACJ74391.1| Hox12 [Branchiostoma lanceolatum]
Length = 180
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 22 AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV---DEAF 76
Q++ LEK + + Y T E + ++A ++ LT++QV WF +RR+K KR+ +EAF
Sbjct: 110 VQLLELEKEFLYNMYITREQRGEIARKVNLTDRQVKIWFQNRRMKMKRMKQRHEEEAF 167
>gi|431918037|gb|ELK17265.1| Homeobox protein CDX-1 [Pteropus alecto]
Length = 268
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212
>gi|507131|gb|AAA20149.1| homeobox-containing protein, partial [Ephydatia fluviatilis]
Length = 118
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 22 AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQ 81
AQV LE+ + KY T +S++A + LTE QV WF +RR K KR +++ V +
Sbjct: 42 AQVYELERRFAVQKYLTAHEQSKLATVLHLTETQVKIWFQNRRYKSKRQQIEQTRVSPKV 101
Query: 82 DRSSGVIQ 89
++S +++
Sbjct: 102 VKTSRMVR 109
>gi|432881702|ref|XP_004073909.1| PREDICTED: homeobox protein Hox-A13a-like [Oryzias latipes]
gi|74267519|dbj|BAE44258.1| hoxA13a [Oryzias latipes]
gi|83016924|dbj|BAE53456.1| hoxA13a [Oryzias latipes]
Length = 299
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 38/56 (67%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR T Q+ LE+ Y +K+ T++ + +++ Q L+E+QV+ WF +RR+KEK++
Sbjct: 236 KRVPYTKVQLKELEREYAANKFITKDKRRRISAQTNLSERQVTIWFQNRRVKEKKI 291
>gi|47210699|emb|CAF96068.1| unnamed protein product [Tetraodon nigroviridis]
Length = 322
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV 72
R T AQ+M LEK + + KY + + +A+ +GLT+ QV W+ +RR+K K++ +
Sbjct: 139 RTIFTEAQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVL 195
>gi|410911104|ref|XP_003969030.1| PREDICTED: homeobox protein Hox-A9a-like isoform 1 [Takifugu
rubripes]
Length = 264
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q++ LEK + + Y T + + +VA + LTE+QV WF +RR+K K+ + D
Sbjct: 200 KRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDG 259
Query: 75 A 75
A
Sbjct: 260 A 260
>gi|392594813|gb|EIW84137.1| homeobox-domain-containing protein, partial [Coniophora puteana
RWD-64-598 SS2]
Length = 326
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
KR TP Q++ LE+F+ + PT + ++++ +G+ E+Q WF +RR K K
Sbjct: 88 KRSRVTPEQLVHLERFFAVDRSPTAARRKEISDMLGMQERQTQIWFQNRRAKAK 141
>gi|220898188|gb|ACL81443.1| HoxB10 [Latimeria menadoensis]
Length = 263
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 10 LEKNIKRRYKTPA---QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
L +KR+ ++P Q + LEK + + Y T E + +++ + LT++QV WF +RR+K
Sbjct: 185 LTAKVKRKKRSPYSKHQTLELEKEFLFNMYLTRERRLEISRSVNLTDRQVKIWFQNRRMK 244
Query: 67 EKRLSVD 73
K+++ D
Sbjct: 245 LKKMTRD 251
>gi|195446503|ref|XP_002070808.1| GK10825 [Drosophila willistoni]
gi|194166893|gb|EDW81794.1| GK10825 [Drosophila willistoni]
Length = 430
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 2 HSEENKVSLEKNIKRRYKTPA--QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
H EE+++ K+ KR +T Q + LEK ++ ++Y T + +A + LTE+Q+ W
Sbjct: 261 HIEESQILDSKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIAHALSLTERQIKIW 320
Query: 60 FCHRRLKEKRLSVDEA 75
F +RR+K K+ EA
Sbjct: 321 FQNRRMKSKKDRTLEA 336
>gi|222635166|gb|EEE65298.1| hypothetical protein OsJ_20535 [Oryza sativa Japonica Group]
Length = 575
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 15 KRRYK--TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR--LKEKRL 70
++RY TP Q+ LE + E +P E ++Q++ ++GL +Q+ WF +RR +K +
Sbjct: 16 RKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWFQNRRTQMKAQHE 75
Query: 71 SVDEAFVGGRQDR 83
D F+ D+
Sbjct: 76 RADNCFLRAENDK 88
>gi|213511378|ref|NP_001133017.1| homeobox protein HoxC11bb [Salmo salar]
gi|157815972|gb|ABV82005.1| homeobox protein HoxC11ba [Salmo salar]
gi|157815990|gb|ABV82014.1| homeobox protein HoxC11bb [Salmo salar]
gi|158702344|gb|ABW77533.1| homeobox protein HoxC11ba [Salmo salar]
Length = 307
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVD 73
KR T Q+ LE+ + + Y +E + Q++ + LT++QV WF +RR+KEK+LS D
Sbjct: 238 KRCPYTKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRD 296
>gi|3005954|emb|CAA76297.1| homeodomain protein [Lineus sanguineus]
Length = 96
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVG 78
T Q + LEK ++ +KY T + ++A +GLTE+Q+ WF +RR+K K+ + + G
Sbjct: 18 TRYQTLELEKEFHFNKYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKENNLQKLTG 76
>gi|429510498|gb|AFZ94987.1| transcription factor Hox2 [Petromyzon marinus]
Length = 385
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL- 70
K ++ Y T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K KR
Sbjct: 152 KRLRTAY-TNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQT 210
Query: 71 -------SVDEAF 76
S DEAF
Sbjct: 211 QYKENQDSSDEAF 223
>gi|356561699|ref|XP_003549117.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
[Glycine max]
Length = 827
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
TP Q+ LE F+ E +P E+ ++ +++++GL KQV WF +RR + K
Sbjct: 148 TPQQIQELEAFFKECPHPDEKQRTDLSKRLGLENKQVKFWFQNRRTQMK 196
>gi|595858|gb|AAC50237.1| caudal-type homeobox protein, partial [Homo sapiens]
Length = 203
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 103 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 150
>gi|4885127|ref|NP_005184.1| homeobox protein CDX-4 [Homo sapiens]
gi|3023467|sp|O14627.1|CDX4_HUMAN RecName: Full=Homeobox protein CDX-4; AltName: Full=Caudal-type
homeobox protein 4
gi|2314825|gb|AAB66319.1| homeobox protein CDX4 [Homo sapiens]
gi|4103945|gb|AAD01894.1| caudal-4 [Homo sapiens]
gi|118764215|gb|AAI28234.1| Caudal type homeobox 4 [Homo sapiens]
gi|119619073|gb|EAW98667.1| caudal type homeobox transcription factor 4 [Homo sapiens]
Length = 284
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 7 KVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+V+ + K +Y+ T Q + LEK ++ ++Y T + KS++A +GL+E+QV WF +R
Sbjct: 165 QVTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNR 224
Query: 64 RLKEKRL 70
R KE+++
Sbjct: 225 RAKERKM 231
>gi|432908830|ref|XP_004078055.1| PREDICTED: POU domain, class 2, transcription factor 2-like
[Oryzias latipes]
Length = 610
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 7 KVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
+ S+E N++ +ALE+ + ++ PT E +AEQ+ + ++ + WFC+RR K
Sbjct: 295 RTSIETNVR---------VALERSFLTNQKPTSEEILLIAEQLNMEKEVIRVWFCNRRQK 345
Query: 67 EKRLSVDEA 75
EKR++ A
Sbjct: 346 EKRINPSSA 354
>gi|395817256|ref|XP_003782089.1| PREDICTED: homeobox protein CDX-1 [Otolemur garnettii]
Length = 266
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELATNLGLTERQVKIWFQNRRAKERKV 212
>gi|332692538|gb|AEE90212.1| Homeobox D11b [Anguilla anguilla]
Length = 279
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 9 SLEKNIKRRYK-TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
SL K+ K+R T Q+ LE+ + + Y +E + Q++ + LT++QV WF +RR+KE
Sbjct: 203 SLLKSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKE 262
Query: 68 KRLSVD--EAFVG 78
K+L+ D + F G
Sbjct: 263 KKLNRDRLQYFTG 275
>gi|195378218|ref|XP_002047881.1| GJ11683 [Drosophila virilis]
gi|194155039|gb|EDW70223.1| GJ11683 [Drosophila virilis]
Length = 638
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 3 SEENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
S ++ S +K+ K+++ P Q+ ALEK + + KY ++++A +G++E QV
Sbjct: 500 SHQHHPSSDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKV 559
Query: 59 WFCHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSID 112
WF +RR K ++ E R+ QD G C T D S+D
Sbjct: 560 WFQNRRTKWRKRHAAEMATAKRK-------QDDMGGDNDGDCSETMDSDNESLD 606
>gi|64654375|gb|AAH96251.1| CDX1 protein [Homo sapiens]
Length = 130
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 30 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 77
>gi|121483826|gb|ABM54207.1| CDX1 [Pan paniscus]
Length = 116
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 16 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 63
>gi|449507151|ref|XP_004176804.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D9
[Taeniopygia guttata]
Length = 328
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 25 MALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQDRS 84
+ LEK + + Y T + + +V+ +GLTE+QV WF +RR+K K+ + + F RQ+
Sbjct: 248 LXLEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPASRQEGK 307
Query: 85 SGVIQDRGSGLRQD 98
G + L +D
Sbjct: 308 EGEAKKEAHDLEED 321
>gi|440798175|gb|ELR19243.1| homeobox domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 644
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 14 IKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVD 73
+KR+ +Q+ LE Y + P+ K +++ Q+G++ K+V WF +RR K+KR D
Sbjct: 558 VKRKRINQSQLDVLEAAYLDDPLPSRRTKQRLSTQLGISIKRVQIWFQNRRAKQKRQRKD 617
Query: 74 EAFVGG 79
+ GG
Sbjct: 618 GSDSGG 623
>gi|356575937|ref|XP_003556092.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
[Glycine max]
Length = 731
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 15 KRRYK--TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
K+RY TP Q+ LE F+ E +P E+ + +++++GL KQV WF +RR + K
Sbjct: 33 KKRYHRHTPHQIQELEAFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMK 88
>gi|195327570|ref|XP_002030491.1| GM24540 [Drosophila sechellia]
gi|194119434|gb|EDW41477.1| GM24540 [Drosophila sechellia]
Length = 606
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 3 SEENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
S ++ S +K+ K+++ P Q+ ALEK + + KY ++++A +G++E QV
Sbjct: 472 SHQHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKV 531
Query: 59 WFCHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQS 118
WF +RR K ++ E R+ QD G C T D S+D E +
Sbjct: 532 WFQNRRTKWRKRHAAEMATAKRK-------QDDMGGDNDGDCSETMDSDNESLDMGESPA 584
Query: 119 RMLYC 123
+ C
Sbjct: 585 QNKRC 589
>gi|392354733|ref|XP_344692.5| PREDICTED: homeobox protein CDX-1 [Rattus norvegicus]
Length = 280
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 172 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 219
>gi|391338532|ref|XP_003743612.1| PREDICTED: uncharacterized protein LOC100897599 [Metaseiulus
occidentalis]
Length = 869
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 3 SEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
S E+K S ++ R TPAQ+ LE+ +++ YP M+ ++A +IGLTE +V WF
Sbjct: 62 SCEDKPSSKQKRHRTRFTPAQLQELERSFSKTHYPDIFMREELAMRIGLTESRVQVWF 119
>gi|357143608|ref|XP_003572981.1| PREDICTED: homeobox-leucine zipper protein HOX16-like [Brachypodium
distachyon]
Length = 340
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
K+R TP QV LEK + E E K+++A ++GL +QV+ WF +RR + K +++
Sbjct: 80 KKRRLTPEQVHLLEKSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKTLER 139
Query: 75 AF 76
F
Sbjct: 140 DF 141
>gi|194870860|ref|XP_001972735.1| GG13719 [Drosophila erecta]
gi|190654518|gb|EDV51761.1| GG13719 [Drosophila erecta]
Length = 600
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 3 SEENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
S ++ S +K+ K+++ P Q+ ALEK + + KY ++++A +G++E QV
Sbjct: 463 SHQHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKV 522
Query: 59 WFCHRRLKEKRLSVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQS 118
WF +RR K ++ E R+ QD G C T D S+D E +
Sbjct: 523 WFQNRRTKWRKRHAAEMATAKRK-------QDDMGGDNDGDCSETMDSDNESLDMGESPA 575
Query: 119 RMLYC 123
+ C
Sbjct: 576 QNKRC 580
>gi|15450327|gb|AAK96033.1| homeodomain transcription factor Maxillopedia [Tribolium
castaneum]
Length = 523
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 14 IKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
+ RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K KR
Sbjct: 3 LPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ 62
Query: 71 SV 72
++
Sbjct: 63 TL 64
>gi|2765089|emb|CAA71835.1| Lox7 [Helobdella triserialis]
Length = 164
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T Q+ LEK ++ +KY T + ++A +GL E QV WF +RR+K K+
Sbjct: 49 TNKQLTELEKEFHFNKYLTRARRIEIASTLGLNETQVKIWFQNRRMKHKK 98
>gi|356529261|ref|XP_003533214.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
[Glycine max]
Length = 771
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEK 68
TP Q+ LE F+ E +P E+ ++ +++++GL KQV WF +RR + K
Sbjct: 84 TPQQIQELEAFFKECPHPDEKQRTDLSKRLGLENKQVKFWFQNRRTQMK 132
>gi|241756280|ref|XP_002406393.1| homeobox protein, putative [Ixodes scapularis]
gi|215506130|gb|EEC15624.1| homeobox protein, putative [Ixodes scapularis]
Length = 162
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR--LSVD 73
R+ T Q + LEK ++ + Y T + ++A + LTE+Q+ WF +RR+K K+ +V
Sbjct: 21 RQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVK 80
Query: 74 EAFVGGRQDRSSGVIQDRGSGL 95
E R D G DR +GL
Sbjct: 81 EINEQARLDAKGGKSPDRDAGL 102
>gi|313747575|ref|NP_001186477.1| homeobox protein Nkx-6.2 [Gallus gallus]
Length = 278
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 5 ENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+ + L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF
Sbjct: 140 QTGMVLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 199
Query: 61 CHRRLKEKR 69
+RR K ++
Sbjct: 200 QNRRTKWRK 208
>gi|47229431|emb|CAF99419.1| unnamed protein product [Tetraodon nigroviridis]
Length = 265
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q++ LEK + + Y T + + +VA + LTE+QV WF +RR+K K+ + D
Sbjct: 201 KRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDG 260
Query: 75 A 75
A
Sbjct: 261 A 261
>gi|312125843|gb|ADQ27865.1| fushi tarazu [Thermobia domestica]
Length = 369
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
R+ T Q + LEK ++ +KY T + ++A +GL+E+Q+ WF +RR+K K+
Sbjct: 239 RQTYTRFQTLELEKEFHFNKYLTRRRRIEIAHSLGLSERQIKIWFQNRRMKAKK 292
>gi|170029587|ref|XP_001842673.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863992|gb|EDS27375.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 301
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T Q+ ALEK ++ ++Y + ++A ++GL+E+Q+ WF +RR+K K+
Sbjct: 117 TGIQLQALEKEFSHNRYLCRPRRIEIATKLGLSERQIKIWFQNRRMKHKK 166
>gi|163915607|gb|AAI57495.1| Bix1 protein [Xenopus laevis]
Length = 401
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
+ + KVS + RR +T P+ + LE+++ + YP + ++A Q+GL E ++ W
Sbjct: 71 TNQQKVSPTQMSNRRKRTVYSPSDLARLEQYFRTNMYPDIHQREEMARQMGLPESRIQVW 130
Query: 60 FCHRRLKEKR 69
F +RR K +R
Sbjct: 131 FQNRRSKARR 140
>gi|358333778|dbj|GAA52242.1| LIM homeobox protein 3/4, partial [Clonorchis sinensis]
Length = 405
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVD 73
R T Q+ AL++ YNE P ++ Q++ + GL + V WF +RR KEKRL D
Sbjct: 120 RTTITAKQLEALKRAYNESPKPVRHVREQLSAETGLDMRVVQVWFQNRRAKEKRLKKD 177
>gi|256079618|ref|XP_002576083.1| homeobox protein even skipped [Schistosoma mansoni]
Length = 454
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 7/161 (4%)
Query: 16 RRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV 72
+RY+T Q+ LEK Y +Y +++++ ++ L E ++ WF +RR+KEKR ++
Sbjct: 145 KRYRTSYSQKQIEVLEKTYQLDRYINRPQRAKLSIELDLPENKIKVWFQNRRMKEKRQAL 204
Query: 73 DEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCHDFPATDLA 132
V G+ +++ + Q C + ++ +D ++ QSR+ P
Sbjct: 205 MLPTVAGK----DPYLRETLLRVTQLYCATRYGNEFPIMDMKKSQSRVSQNKTIPGEIRK 260
Query: 133 YDRNQYAAHASERDDTSSESSSFLQDRLYSESDKPYANETS 173
R + + S+ +S + S S KP+ E++
Sbjct: 261 RIRTSFNPTTTMTTTVLSDKNSHHNGKSQSLSKKPWEKESN 301
>gi|17506281|ref|NP_491693.1| Protein CEH-12 [Caenorhabditis elegans]
gi|21903413|sp|P17487.2|HM12_CAEEL RecName: Full=Homeobox protein ceh-12
gi|351058707|emb|CCD66437.1| Protein CEH-12 [Caenorhabditis elegans]
Length = 180
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 34/47 (72%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
Q++ LEK +++++Y + + Q+A+Q+ L+E Q+ WF +RR+K KR
Sbjct: 121 QLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNKR 167
>gi|353230820|emb|CCD77237.1| putative homeobox protein even skipped [Schistosoma mansoni]
Length = 454
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 7/161 (4%)
Query: 16 RRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV 72
+RY+T Q+ LEK Y +Y +++++ ++ L E ++ WF +RR+KEKR ++
Sbjct: 145 KRYRTSYSQKQIEVLEKTYQLDRYINRPQRAKLSIELDLPENKIKVWFQNRRMKEKRQAL 204
Query: 73 DEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQGDYRSIDPREVQSRMLYCHDFPATDLA 132
V G+ +++ + Q C + ++ +D ++ QSR+ P
Sbjct: 205 MLPTVAGK----DPYLRETLLRVTQLYCATRYGNEFPIMDMKKSQSRVSQNKTIPGEIRK 260
Query: 133 YDRNQYAAHASERDDTSSESSSFLQDRLYSESDKPYANETS 173
R + + S+ +S + S S KP+ E++
Sbjct: 261 RIRTSFNPTTTMTTTVLSDKNSHHNGKSQSLSKKPWEKESN 301
>gi|224131970|ref|XP_002321223.1| predicted protein [Populus trichocarpa]
gi|222861996|gb|EEE99538.1| predicted protein [Populus trichocarpa]
Length = 1152
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 19 KTPAQVMALEKFYN-EHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFV 77
K+P Q+ AL KFY E KYP++ +A LT KQV GWF +R EK S +E
Sbjct: 4 KSPLQLQALLKFYAAEDKYPSQRAMEDLAVVSNLTFKQVRGWFIEKRRSEK--SKNELIE 61
Query: 78 GGRQDRSSGVIQDR-GSGLRQDSCGSTKQ 105
R + V + R G+ + D+ KQ
Sbjct: 62 PPRLTKKLSVFKGRKGAAVASDARKMLKQ 90
>gi|312125849|gb|ADQ27868.1| fushi tarazu [Pedetontus saltator]
Length = 134
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
R+ T Q + LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K K+
Sbjct: 28 RQTYTRVQTLELEKEFHFNRYLTRRRRIEIAHVLGLTERQIKIWFQNRRMKAKK 81
>gi|217035841|gb|ACJ74393.1| Hox14 [Branchiostoma lanceolatum]
Length = 217
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 9 SLEKNI--KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK 66
SL K + KRR + Q+ LE Y +++Y + + + Q+++++ LTE+QV WF +RR+K
Sbjct: 145 SLTKPVRPKRRPYSKYQLNELENEYVQNQYISRDKRLQLSQKLNLTERQVKIWFQNRRIK 204
Query: 67 EKRL 70
+K+L
Sbjct: 205 QKKL 208
>gi|3550277|gb|AAC34663.1| homeodomain protein Mix.4 [Xenopus laevis]
Length = 401
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
+ + KVS + RR +T P+ + LE+++ + YP + ++A Q+GL E ++ W
Sbjct: 71 TNQQKVSPTQMSNRRKRTVYSPSDLARLEQYFRTNMYPDIHQREEMARQMGLPESRIQVW 130
Query: 60 FCHRRLKEKR 69
F +RR K +R
Sbjct: 131 FQNRRSKARR 140
>gi|225555387|gb|EEH03679.1| homeobox domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 736
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
Q++ LE +N++ PT ++ ++AE+I +TE+ V WF +RR K K ++
Sbjct: 92 QLVTLETEFNKNPTPTAAVRERIAEEINMTERSVQIWFQNRRAKIKMIA 140
>gi|340727696|ref|XP_003402174.1| PREDICTED: hypothetical protein LOC100650225 [Bombus terrestris]
Length = 355
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR-----L 70
R+ T +Q + LEK ++ ++Y T + + ++A + L+E+Q+ WF +RR+K K+
Sbjct: 213 RQTYTRSQTLELEKEFHYNRYLTRKRRVEIARILSLSERQIKIWFQNRRMKAKKNGKPAY 272
Query: 71 SVDEAFVGGRQDRSSGVIQDRG 92
S EA G RS V D G
Sbjct: 273 SALEANSEGSSPRSQNVSPDSG 294
>gi|326921919|ref|XP_003207201.1| PREDICTED: homeobox protein Hox-A9-like [Meleagris gallopavo]
Length = 122
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D A
Sbjct: 64 TKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRA 119
>gi|325094699|gb|EGC48009.1| homeobox domain-containing protein [Ajellomyces capsulatus H88]
Length = 736
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
Q++ LE +N++ PT ++ ++AE+I +TE+ V WF +RR K K ++
Sbjct: 92 QLVTLETEFNKNPTPTAAVRERIAEEINMTERSVQIWFQNRRAKIKMIA 140
>gi|154286942|ref|XP_001544266.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407907|gb|EDN03448.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 736
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
Q++ LE +N++ PT ++ ++AE+I +TE+ V WF +RR K K ++
Sbjct: 92 QLVTLETEFNKNPTPTAAVRERIAEEINMTERSVQIWFQNRRAKIKMIA 140
>gi|6680914|ref|NP_031700.1| homeobox protein CDX-4 [Mus musculus]
gi|729725|sp|Q07424.1|CDX4_MOUSE RecName: Full=Homeobox protein CDX-4; AltName: Full=Caudal-type
homeobox protein 4
gi|388040|gb|AAA16901.1| homeobox protein [Mus musculus]
gi|21425588|emb|CAD33953.1| Cdx4 [Mus musculus]
gi|111600846|gb|AAI19159.1| Caudal type homeo box 4 [Mus musculus]
gi|148682161|gb|EDL14108.1| caudal type homeobox 4 [Mus musculus]
Length = 282
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 7 KVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+V+ + K +Y+ T Q + LEK ++ ++Y T KS++A +GL+E+QV WF +R
Sbjct: 163 QVTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNR 222
Query: 64 RLKEKRL 70
R KE+++
Sbjct: 223 RAKERKM 229
>gi|391334352|ref|XP_003741569.1| PREDICTED: homeobox protein Hox-B6-like [Metaseiulus occidentalis]
Length = 224
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 3 SEENKVSLEKNIKRRYK--TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
S E L+ +IKR T Q++ LE+ + + Y + + ++A ++GLTEKQV WF
Sbjct: 127 SPERVPQLDSDIKRIRTAFTGTQLLELEREFTANMYLSRLRRIEIASRLGLTEKQVKIWF 186
Query: 61 CHRRLKEKR 69
+RR+K+K+
Sbjct: 187 QNRRVKQKK 195
>gi|213625183|gb|AAI70006.1| Bix1 protein [Xenopus laevis]
gi|213626026|gb|AAI70004.1| Bix1 protein [Xenopus laevis]
Length = 401
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
+ + KVS + RR +T P+ + LE+++ + YP + ++A Q+GL E ++ W
Sbjct: 71 TNQQKVSPTQMSNRRKRTVYSPSDLARLEQYFRTNMYPDIHQREEMARQMGLPESRIQVW 130
Query: 60 FCHRRLKEKR 69
F +RR K +R
Sbjct: 131 FQNRRSKARR 140
>gi|63103212|gb|AAD46167.2|AF151664_1 probiscipedia homeobox protein [Alitta virens]
Length = 193
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 16 RRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV 72
RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K KR +
Sbjct: 18 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKFKRQTQ 77
Query: 73 DEAFVGGRQD 82
+ G D
Sbjct: 78 TKGLPDGNSD 87
>gi|395837227|ref|XP_003791542.1| PREDICTED: homeobox protein Hox-D8 [Otolemur garnettii]
Length = 289
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ + LTE+QV WF +RR+K K+ + + F RQD
Sbjct: 207 QTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKENNKDKFPVSRQD 266
Query: 83 RSSGVIQDRGSGLRQD 98
G + L +D
Sbjct: 267 VKDGETKKEAQDLEED 282
>gi|358419920|ref|XP_003584362.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein CDX-4-like [Bos
taurus]
gi|359081868|ref|XP_003588202.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein CDX-4-like [Bos
taurus]
Length = 285
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 7 KVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+V+ + K +Y+ T Q + LEK ++ ++Y T KS++A +GL+E+QV WF +R
Sbjct: 166 QVTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNR 225
Query: 64 RLKEKRL 70
R KE+++
Sbjct: 226 RAKERKM 232
>gi|213514426|ref|NP_001133007.1| homeobox protein HoxC6ab [Salmo salar]
gi|157815960|gb|ABV81999.1| homeobox protein HoxC6ab [Salmo salar]
gi|158702336|gb|ABW77526.1| homeobox protein HoxC6ab [Salmo salar]
Length = 228
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
+ I RY+T + LEK ++ ++Y T + ++A + LTE+Q+ WF +RR+K K+ S
Sbjct: 146 RQIYSRYQT----LELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKES 201
Query: 72 VDEAFVGG 79
+ + V G
Sbjct: 202 ILTSTVTG 209
>gi|73954198|ref|XP_855089.1| PREDICTED: homeobox protein CDX-1 [Canis lupus familiaris]
Length = 265
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 165 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212
>gi|410949657|ref|XP_003981537.1| PREDICTED: homeobox protein CDX-1 [Felis catus]
Length = 253
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 155 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 202
>gi|255742472|gb|ACU32584.1| homeobox protein HoxD11 [Callorhinchus milii]
Length = 296
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 2 HSEENKVSLEKNIKRRYK----TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVS 57
HS K ++ ++ R K T Q+ LE+ + + Y +E + Q++ + LT++QV
Sbjct: 210 HSATEKSNVSTPLRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVK 269
Query: 58 GWFCHRRLKEKRLSVD 73
WF +RR+KEK+LS D
Sbjct: 270 IWFQNRRMKEKKLSRD 285
>gi|281345661|gb|EFB21245.1| hypothetical protein PANDA_006595 [Ailuropoda melanoleuca]
Length = 178
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 78 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 125
>gi|75106330|sp|Q5JMF3.1|ROC9_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC9; AltName:
Full=GLABRA 2-like homeobox protein 9; AltName:
Full=HD-ZIP protein ROC9; AltName: Full=Homeodomain
transcription factor ROC9; AltName: Full=Protein RICE
OUTERMOST CELL-SPECIFIC 9
gi|57900354|dbj|BAD87344.1| putative homeodomain protein [Oryza sativa Japonica Group]
Length = 816
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 13 NIKRRYK-----TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
N KRR K T Q+ +E + E +P E + QV++Q+GL+ +QV WF +RR +
Sbjct: 91 NKKRRRKNYHRHTAEQIRIMEALFKESPHPDERQRQQVSKQLGLSARQVKFWFQNRRTQI 150
Query: 68 K 68
K
Sbjct: 151 K 151
>gi|148229318|ref|NP_001081832.1| Brachyury-inducible homeobox 1, gene 1 [Xenopus laevis]
gi|3661465|gb|AAC61701.1| homeobox protein BIX1 [Xenopus laevis]
Length = 401
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 3 SEENKVSLEKNIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
+ + KVS + RR +T P+ + LE+++ + YP + ++A Q+GL E ++ W
Sbjct: 71 TNQQKVSPTQMSNRRKRTVYSPSDLARLEQYFRTNMYPDIHQREEMARQMGLPESRIQVW 130
Query: 60 FCHRRLKEKR 69
F +RR K +R
Sbjct: 131 FQNRRSKARR 140
>gi|255755655|dbj|BAH96553.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 230
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR+ T Q + LEK + + Y T + ++ ++ + LTE+QV WF +RR+K K++ + E
Sbjct: 153 KRKPYTKYQTLELEKEFLYNMYLTRDRRTDISRALNLTERQVKIWFQNRRMKLKKMRLRE 212
>gi|410911114|ref|XP_003969035.1| PREDICTED: homeobox protein Hox-A13a-like [Takifugu rubripes]
gi|119370780|sp|Q1KL22.1|HXADA_FUGRU RecName: Full=Homeobox protein Hox-A13a
gi|94482756|gb|ABF22376.1| homeobox protein HoxA13a [Takifugu rubripes]
Length = 302
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 38/56 (67%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR T Q+ LE+ Y +K+ T++ + +++ Q L+E+QV+ WF +RR+KEK++
Sbjct: 239 KRVPYTKVQLKELEREYAANKFITKDKRRRISAQTNLSERQVTIWFQNRRVKEKKV 294
>gi|18026214|gb|AAL25808.1| Lox5 homeodomain protein [Euprymna scolopes]
Length = 100
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%)
Query: 4 EENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
EE + + E+ R+ T Q + LEK ++ ++Y T + ++A +GL+E+Q+ WF +R
Sbjct: 12 EEIETAYEQKRTRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHSLGLSERQIKIWFQNR 71
Query: 64 RLKEKR 69
R+K K+
Sbjct: 72 RMKWKK 77
>gi|429962857|gb|ELA42401.1| hypothetical protein VICG_00500 [Vittaforma corneae ATCC 50505]
Length = 106
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
T Q+ L Y +K PT + Q+A+++G+ E +V WF +RR K++RLS
Sbjct: 22 TKKQIEYLTSIYATNKKPTAYYRFQIAQKLGVPEDKVKNWFQNRRAKDRRLS 73
>gi|157818679|ref|NP_001100412.1| homeobox protein CDX-4 [Rattus norvegicus]
gi|149055608|gb|EDM07192.1| caudal type homeo box 4 (predicted) [Rattus norvegicus]
Length = 288
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 7 KVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+V+ + K +Y+ T Q + LEK ++ ++Y T KS++A +GL+E+QV WF +R
Sbjct: 169 QVTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNR 228
Query: 64 RLKEKRL 70
R KE+++
Sbjct: 229 RAKERKM 235
>gi|72124445|ref|XP_787382.1| PREDICTED: paired mesoderm homeobox protein 1-like
[Strongylocentrotus purpuratus]
Length = 327
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 3 SEENKVSLEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
S+ +S + +RR +T AQ+ ALEK + YP ++ ++A+++ LTE +V W
Sbjct: 154 SDNGIISAKSKRQRRNRTTFTTAQLDALEKVFERTHYPDAFLREELAKKVDLTEARVQVW 213
Query: 60 FCHRRLKEKR 69
F +RR K +R
Sbjct: 214 FQNRRAKFRR 223
>gi|63103214|gb|AAD46166.2|AF151663_1 labial homeobox protein [Alitta virens]
Length = 97
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 13 NIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
N+ R T Q+ LEK ++ +KY T + ++A +GL E QV WF +RR+K+K+
Sbjct: 13 NMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQVKIWFQNRRMKQKK 69
>gi|196166497|gb|ACG70807.1| Cdx [Convolutriloba longifissura]
Length = 310
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 27 LEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
LE + +Y T KS++A Q+GL+E+QV WF +RR KE+++S
Sbjct: 187 LENEFRSAQYITIRRKSELAMQVGLSERQVKIWFQNRRAKERKVS 231
>gi|134080840|emb|CAK41399.1| unnamed protein product [Aspergillus niger]
Length = 570
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 22 AQVMALEKFYNEHK-YPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
A+++ + N+H YPT+E K+ A+Q GLTEKQ+S WF + R + + +
Sbjct: 210 AKILRDWLYRNQHAPYPTDEQKAAFAQQTGLTEKQISTWFANARRRHRMV 259
>gi|32394400|gb|AAN11407.1| parahox class caudal-like protein Srcdx [Symsagittifera
roscoffensis]
Length = 82
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
T Q LE + +Y T KS++A Q+GL+E+QV WF +RR KE+++S
Sbjct: 16 TDRQRAELENEFRSAQYITIRRKSELAMQVGLSERQVKIWFQNRRAKERKVS 67
>gi|391347175|ref|XP_003747840.1| PREDICTED: uncharacterized protein LOC100898910 [Metaseiulus
occidentalis]
Length = 601
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 8 VSLEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
++ E + RR +T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR
Sbjct: 146 LTGENGMPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAAALDLTERQVKVWFQNRR 205
Query: 65 LKEKRLSV 72
++ KR ++
Sbjct: 206 MRHKRQTM 213
>gi|348564438|ref|XP_003468012.1| PREDICTED: homeobox protein Hox-A9-like [Cavia porcellus]
Length = 272
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 209 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 268
Query: 75 A 75
A
Sbjct: 269 A 269
>gi|308485517|ref|XP_003104957.1| CRE-PHP-3 protein [Caenorhabditis remanei]
gi|308257278|gb|EFP01231.1| CRE-PHP-3 protein [Caenorhabditis remanei]
Length = 270
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 2 HSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFC 61
H E S KR+ T AQ + LEK + + Y +++ + ++A+ + LTE+QV WF
Sbjct: 184 HLEWTSSSHTSRKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQ 243
Query: 62 HRRLKEKR 69
+RR+K+K+
Sbjct: 244 NRRMKDKK 251
>gi|83318790|emb|CAI91292.1| fushi tarazu [Cupiennius salei]
Length = 178
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
R+ T Q + LEK ++ ++Y T + ++A +GLTE+Q+ WF +RR+K K+
Sbjct: 56 RQTYTRYQTLELEKEFHFNQYLTRRRRIEIAHTLGLTERQIKIWFQNRRMKAKK 109
>gi|14587301|dbj|BAB61212.1| putative homeobox protein GLABRA2 [Oryza sativa Japonica Group]
Length = 779
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 13 NIKRRYK-----TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
N KRR K T Q+ +E + E +P E + QV++Q+GL+ +QV WF +RR +
Sbjct: 91 NKKRRRKNYHRHTAEQIRIMEALFKESPHPDERQRQQVSKQLGLSARQVKFWFQNRRTQI 150
Query: 68 K 68
K
Sbjct: 151 K 151
>gi|327283061|ref|XP_003226260.1| PREDICTED: hypothetical protein LOC100565849 [Anolis carolinensis]
Length = 540
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ +GLTE+QV WF +RR+K K+ + + F RQ+
Sbjct: 460 QTLELEKEFLFNPYLTRKRRIEVSHGLGLTERQVKIWFQNRRMKWKKENNKDKFPAARQE 519
>gi|47229429|emb|CAF99417.1| unnamed protein product [Tetraodon nigroviridis]
Length = 301
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 38/56 (67%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR T Q+ LE+ Y +K+ T++ + +++ Q L+E+QV+ WF +RR+KEK++
Sbjct: 238 KRVPYTKVQLKELEREYAANKFITKDKRRRISAQTNLSERQVTIWFQNRRVKEKKV 293
>gi|363728249|ref|XP_003640482.1| PREDICTED: paired box protein Pax-6-like [Gallus gallus]
Length = 360
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
R + + Q+ LEK + E +YP E + ++A IG+T +++ WF +RR K ++ A
Sbjct: 238 RTFYSAEQLEELEKVFQEDRYPDNEKRREIAAVIGVTPQRIMVWFQNRRAKWRKTEKSNA 297
Query: 76 FVGGRQDRSSGVIQDRGSGLRQDSCGS 102
+ S+ + GS DSCG+
Sbjct: 298 KGSKKYSTSAALSVHAGS----DSCGA 320
>gi|358388365|gb|EHK25958.1| hypothetical protein TRIVIDRAFT_36050 [Trichoderma virens Gv29-8]
Length = 623
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
Q+ LE +N++ PT ++ ++AE+I +TE+ V WF +RR K K L+
Sbjct: 85 QLTTLEMEFNKNPTPTASVRDRIAEEINMTERSVQIWFQNRRAKIKMLA 133
>gi|95104785|gb|ABF51666.1| caudal homeobox gene 2 [Amia calva]
Length = 272
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ ++Y T K+ +A +GL+E+QV WF +RR KE++L
Sbjct: 164 QRLELEKEFHSNRYITIRRKADIAATLGLSERQVKIWFQNRRAKERKL 211
>gi|28195122|gb|AAO33774.1| knotted protein TKN4 [Solanum lycopersicum]
Length = 335
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 22 AQVMALEKFYNEHK--YPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGG 79
A+++ L+ + N ++ YPTEE K++++E GL +KQ++ WF ++R + R S D F
Sbjct: 255 ARIVLLDWWKNHYRWPYPTEEEKNRLSEMTGLDQKQINNWFINQRKRHWRPSEDMKF-AL 313
Query: 80 RQDRSSGVIQDRGSG 94
+ S+G + GSG
Sbjct: 314 MEGVSAGSMYFDGSG 328
>gi|57112491|ref|XP_549080.1| PREDICTED: homeobox protein CDX-4 [Canis lupus familiaris]
Length = 326
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 7 KVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+V+ + K +Y+ T Q + LEK ++ ++Y T + KS++A +GL+E+QV WF +R
Sbjct: 207 QVTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNR 266
Query: 64 RLKEKR 69
R KE++
Sbjct: 267 RAKERK 272
>gi|22316137|emb|CAD44460.1| homeo box B1b protein [Danio rerio]
Length = 307
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 5 ENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
E + ++NI R T Q+ LEK ++ +KY T + +VA + L E QV WF +RR
Sbjct: 201 EYGIHGQQNIIRTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQVKIWFQNRR 260
Query: 65 LKEKR 69
+K+K+
Sbjct: 261 MKQKK 265
>gi|239613698|gb|EEQ90685.1| homeobox domain-containing protein [Ajellomyces dermatitidis ER-3]
gi|327350130|gb|EGE78987.1| homeobox domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 765
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
Q++ LE +N++ PT ++ ++AE+I +TE+ V WF +RR K K ++
Sbjct: 99 QLVTLEMEFNKNPTPTAAVRERIAEEINMTERSVQIWFQNRRAKIKMIA 147
>gi|6679335|ref|NP_032875.1| pituitary-specific positive transcription factor 1 [Mus musculus]
gi|123409|sp|Q00286.1|PIT1_MOUSE RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|53691|emb|CAA40737.1| pit-1 [Mus musculus]
gi|493686|dbj|BAA02289.1| pit-1/GHF-1 [Mus musculus]
gi|38174668|gb|AAH61213.1| Pou1f1 protein [Mus musculus]
gi|148665828|gb|EDK98244.1| pituitary specific transcription factor 1 [Mus musculus]
gi|227214|prf||1616365A pit-1 gene
Length = 291
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 15 KRRYKTPAQVMA---LEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR+ +T V A LE+ + EH P+ + ++AE++ L ++ V WFC+RR +EKR+
Sbjct: 214 KRKRRTTISVAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRV 272
>gi|449268707|gb|EMC79556.1| Homeobox protein GBX-2, partial [Columba livia]
Length = 174
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 6 NKVSLEKNIKRRYK-TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRR 64
N S KN +RR T Q++ LEK ++ KY + +SQ+A + L+E QV WF +RR
Sbjct: 66 NTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRR 125
Query: 65 LKEKRLSVDEA 75
K KR+ A
Sbjct: 126 AKWKRVKAGNA 136
>gi|443729071|gb|ELU15123.1| hypothetical protein CAPTEDRAFT_25827, partial [Capitella teleta]
Length = 198
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K I+ + +P+Q++ LE + ++ Y + + ++A + LTE QV WF +RR K KR+S
Sbjct: 101 KRIRTAF-SPSQLLQLEHAFEKNHYVVGQERKELAASLNLTETQVKVWFQNRRTKHKRVS 159
Query: 72 VD 73
D
Sbjct: 160 DD 161
>gi|348533888|ref|XP_003454436.1| PREDICTED: homeobox protein Hox-A2b isoform 2 [Oreochromis
niloticus]
Length = 355
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 16 RRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
RR +T Q++ LEK ++ +KY + ++A + LTEKQV WF +RR+K KR
Sbjct: 143 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQVKVWFQNRRMKHKR 199
>gi|338713569|ref|XP_001501535.2| PREDICTED: homeobox protein CDX-1-like [Equus caballus]
Length = 163
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 61 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 108
>gi|328700241|ref|XP_003241192.1| PREDICTED: hypothetical protein LOC100164575 [Acyrthosiphon pisum]
Length = 420
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 2 HSEENKVSLEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
+SE+NK RRY+T Q++ LEK + + Y + + ++A ++ L E +
Sbjct: 57 NSEQNKDGTADQTIRRYRTAFTREQLLRLEKEFYKENYVSRPRRCELATELNLPESTIKV 116
Query: 59 WFCHRRLKEKRLSVDEAF 76
WF +RR+K+KR + A+
Sbjct: 117 WFQNRRMKDKRQRIAMAW 134
>gi|339245043|ref|XP_003378447.1| homeobox protein Hox-A4 [Trichinella spiralis]
gi|316972642|gb|EFV56308.1| homeobox protein Hox-A4 [Trichinella spiralis]
Length = 186
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T +QV+ LEK ++ ++Y T + ++A + LTE+QV WF +RR+K K+
Sbjct: 68 TRSQVLELEKEFHFNRYLTRRRRVEIAHTLDLTERQVKIWFQNRRMKLKK 117
>gi|209413788|ref|NP_001129256.1| homeobox protein Nkx-6.2 [Danio rerio]
Length = 278
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 8 VSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+ L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +R
Sbjct: 143 MMLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNR 202
Query: 64 RLKEKR 69
R K ++
Sbjct: 203 RTKWRK 208
>gi|440901662|gb|ELR52561.1| Homeobox protein CDX-1, partial [Bos grunniens mutus]
Length = 173
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 73 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 120
>gi|14916603|sp|Q9PWD5.1|HXA9_MORSA RecName: Full=Homeobox protein Hox-A9
gi|5669602|gb|AAD46396.1|AF089743_2 homeodomain protein Hox-A9 [Morone saxatilis]
Length = 269
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q++ LEK + + Y T + + +VA + LTE+QV WF +RR+K K+ + D
Sbjct: 205 KRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDG 264
Query: 75 A 75
A
Sbjct: 265 A 265
>gi|367025029|ref|XP_003661799.1| hypothetical protein MYCTH_2301643 [Myceliophthora thermophila ATCC
42464]
gi|347009067|gb|AEO56554.1| hypothetical protein MYCTH_2301643 [Myceliophthora thermophila ATCC
42464]
Length = 636
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
Q+ LE +N++ PT ++ ++AE+I +TE+ V WF +RR K K L+
Sbjct: 99 QLTTLEMEFNKNPTPTANVRERIAEEINMTERSVQIWFQNRRAKIKMLA 147
>gi|410911098|ref|XP_003969027.1| PREDICTED: homeobox protein Hox-A2a-like [Takifugu rubripes]
gi|119370770|sp|Q1KL11.1|HXA2A_FUGRU RecName: Full=Homeobox protein Hox-A2a
gi|94482763|gb|ABF22383.1| homeobox protein HoxA2a [Takifugu rubripes]
Length = 363
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL----- 70
R T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K KR
Sbjct: 141 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQSKE 200
Query: 71 ---------SVDEAFVGGRQDRSSGVIQDRGSGLRQDSCGSTKQ 105
S +E +D + V G+ L +D+C K+
Sbjct: 201 NHNAEGKGPSTEEGIHSDEEDEAP-VFDRSGALLERDTCSFQKK 243
>gi|3559789|gb|AAD08713.1| homeodomain protein [Homo sapiens]
Length = 272
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 209 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 268
Query: 75 A 75
A
Sbjct: 269 A 269
>gi|358341731|dbj|GAA49331.1| homeobox protein Hox-B3 [Clonorchis sinensis]
Length = 531
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q++ LEK ++ Y + + ++A+Q+GL+E+Q+ WF +RR+K+K+ D R D
Sbjct: 339 QLVELEKEFHYSNYLVQPRRVELAKQLGLSERQIKIWFQNRRMKQKKEVRDAEKFKARYD 398
Query: 83 RSSG 86
G
Sbjct: 399 YGFG 402
>gi|1008448|gb|AAA78790.1| HOX-1.7 protein, partial [Mus musculus]
Length = 92
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D A
Sbjct: 34 TKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRA 89
>gi|224040|prf||1008211A fushi tarazu gene
Length = 345
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 2 HSEENKVSLEKNIKRRYKTPA--QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGW 59
H EE S K+ KR +T Q + LEK ++ ++Y T + +A + L+E+Q+ W
Sbjct: 267 HIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIW 326
Query: 60 FCHRRLKEKRLSV 72
F +RR+K K L V
Sbjct: 327 FQNRRMKSKNLYV 339
>gi|351704298|gb|EHB07217.1| Homeobox protein Hox-A9 [Heterocephalus glaber]
Length = 255
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 192 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 251
Query: 75 A 75
A
Sbjct: 252 A 252
>gi|147904242|ref|NP_001090355.1| NK6 homeobox 2 [Xenopus laevis]
gi|114107871|gb|AAI23230.1| Nkx6-2 protein [Xenopus laevis]
Length = 281
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 8 VSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+ L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +R
Sbjct: 146 LMLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNR 205
Query: 64 RLK-EKRLSVDEAFVGGRQD 82
R K KR + + A + D
Sbjct: 206 RTKWRKRHAAEMATAKKKHD 225
>gi|157136638|ref|XP_001663802.1| emx homeobox protein [Aedes aegypti]
gi|108880988|gb|EAT45213.1| AAEL003504-PA, partial [Aedes aegypti]
Length = 409
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
+P Q++ LE + + Y + +A+ +GLTE QV WF +RR K KR+ +E
Sbjct: 287 SPTQLLKLEHAFENNHYVVGAERKSLAQALGLTETQVKVWFQNRRTKHKRMQQEE 341
>gi|449434833|ref|XP_004135200.1| PREDICTED: uncharacterized protein LOC101204430 [Cucumis sativus]
gi|449478471|ref|XP_004155327.1| PREDICTED: uncharacterized LOC101204430 [Cucumis sativus]
Length = 254
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRL--KEKRLSV 72
K+R + QV LEK +N+ E K Q+AE+IGL +QV+ WF +RR K KR+
Sbjct: 39 KKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIES 98
Query: 73 DEAFVGGRQDR 83
D + D+
Sbjct: 99 DYECLSAEYDK 109
>gi|341877476|gb|EGT33411.1| hypothetical protein CAEBREN_23323 [Caenorhabditis brenneri]
Length = 111
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 34/48 (70%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q++ LEK +++++Y + + Q+A+Q+ L+E Q+ WF +RR+K KR
Sbjct: 47 QLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNKRC 94
>gi|187936707|dbj|BAG32151.1| Hox14 homolog [Lethenteron camtschaticum]
Length = 146
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 35/48 (72%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q+ LE+ ++E+++ T E++ ++ ++ LTE+QV WF ++R KEK+L
Sbjct: 70 QISELERAFDENRFLTPELRLSISHRLSLTERQVKIWFQNQRQKEKKL 117
>gi|31323451|gb|AAP47027.1|AF375968_1 knotted homeodomain protein 4, partial [Solanum lycopersicum]
Length = 338
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 22 AQVMALEKFYNEHK--YPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGG 79
A+++ L+ + N ++ YPTEE K++++E GL +KQ++ WF ++R + R S D F
Sbjct: 258 ARIVLLDWWKNHYRWPYPTEEEKNRLSEMTGLDQKQINNWFINQRKRHWRPSEDMKF-AL 316
Query: 80 RQDRSSGVIQDRGSG 94
+ S+G + GSG
Sbjct: 317 MEGVSAGSMYFDGSG 331
>gi|432901746|ref|XP_004076926.1| PREDICTED: homeobox protein Nkx-6.1-like [Oryzias latipes]
Length = 249
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 8 VSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+ L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +R
Sbjct: 113 IMLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNR 172
Query: 64 RLKEKR 69
R K ++
Sbjct: 173 RTKWRK 178
>gi|410934537|gb|AFV93985.1| homeodomain-containing protein Hox12, partial [Branchiostoma
lanceolatum]
Length = 166
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 22 AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSV---DEAF 76
Q++ LEK + + Y T E + ++A ++ LT++QV WF +RR+K KR+ +EAF
Sbjct: 102 VQLLELEKEFLYNMYITREQRGEIARKVNLTDRQVKIWFQNRRMKMKRMKQRHEEEAF 159
>gi|395859307|ref|XP_003801981.1| PREDICTED: zinc finger homeobox protein 2 [Otolemur garnettii]
Length = 2570
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 15 KRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
+RRY+T Q+ ++ Y ++ PT + + E+IGL ++ + WF + R KEK+
Sbjct: 2063 QRRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQVWFQNARAKEKKAK 2122
Query: 72 VDEAFVGGRQDRSSGVI 88
+ A VGG S G +
Sbjct: 2123 LQGAAVGGTGGSSEGPL 2139
>gi|358332706|dbj|GAA30037.2| homeobox protein SMOX-1 [Clonorchis sinensis]
Length = 733
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%)
Query: 1 MHSEENKVSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
M+ + V ++ R+ T Q + LEK ++ +KY T + ++A + LTE+Q+ WF
Sbjct: 476 MNPKGTDVGADQKRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHTLTLTERQIKIWF 535
Query: 61 CHRRLKEKR 69
+RR+K K+
Sbjct: 536 QNRRMKWKK 544
>gi|255742475|gb|ACU32587.1| homeobox protein HoxD8 [Callorhinchus milii]
Length = 239
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ +GLTE+QV WF +RR+K K+ + + F R +
Sbjct: 158 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPTSRNE 217
Query: 83 RSSGV 87
GV
Sbjct: 218 EEEGV 222
>gi|195137700|ref|XP_002012587.1| GI13996 [Drosophila mojavensis]
gi|193906491|gb|EDW05358.1| GI13996 [Drosophila mojavensis]
Length = 278
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
R T Q++ LE+ +NE+KY + +A+++ LTE+QV WF +RR+K K+
Sbjct: 27 RTAFTSHQLLELEREFNENKYLGRPRRIGIAQRLQLTERQVKIWFQNRRMKSKK 80
>gi|14916588|sp|Q9IA15.1|HXD11_HETFR RecName: Full=Homeobox protein Hox-D11
gi|7271823|gb|AAF44635.1|AF224263_5 HoxD11 [Heterodontus francisci]
Length = 265
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 3 SEENKVS--LEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWF 60
+E+N +S L KR T Q+ LE+ + + Y +E + Q++ + LT++QV WF
Sbjct: 182 TEKNSLSTALRCRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWF 241
Query: 61 CHRRLKEKRLSVDEA-FVGG 79
+RR+KEK+LS D F G
Sbjct: 242 QNRRMKEKKLSRDRLHFFTG 261
>gi|444723684|gb|ELW64325.1| Homeobox protein CDX-1 [Tupaia chinensis]
Length = 218
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 118 QRLELEKEFHYSRYITIRRKSELATNLGLTERQVKIWFQNRRAKERKV 165
>gi|17554390|ref|NP_499573.1| Protein PHP-3 [Caenorhabditis elegans]
gi|5731337|gb|AAD48876.1|AF172092_1 homeodomain protein PHP-3, partial [Caenorhabditis elegans]
gi|14530718|emb|CAA22081.2| Protein PHP-3 [Caenorhabditis elegans]
Length = 275
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ T AQ + LEK + + Y +++ + ++A+ + LTE+QV WF +RR+K+K+
Sbjct: 202 KRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMKDKK 256
>gi|345313829|ref|XP_001518363.2| PREDICTED: homeobox protein Hox-B9a-like [Ornithorhynchus anatinus]
Length = 173
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
T Q+ LEK Y K+ T+E + +++ L+E+QV+ WF +RR+KEK+L
Sbjct: 60 TKIQLKELEKEYAASKFITKEKRRRISATTNLSERQVTIWFQNRRVKEKKL 110
>gi|89573738|gb|ABD77103.1| transcription factor Nkx6.2 [Danio rerio]
Length = 280
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 3 SEENKVSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSG 58
+ + + L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV
Sbjct: 138 AAQANMMLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKV 197
Query: 59 WFCHRRLKEKR 69
WF +RR K ++
Sbjct: 198 WFQNRRTKWRK 208
>gi|49583|emb|CAA31888.1| unnamed protein product [Cavia sp.]
Length = 176
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D A
Sbjct: 118 TKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRA 173
>gi|157278072|ref|NP_001098136.1| HOXA9A [Oryzias latipes]
gi|6252950|dbj|BAA86255.1| HOXA9A [Oryzias latipes]
Length = 267
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q++ LEK + + Y T + + +VA + LTE+QV WF +RR+K K+ + D
Sbjct: 203 KRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDG 262
Query: 75 A 75
A
Sbjct: 263 A 263
>gi|260790863|ref|XP_002590460.1| hypothetical protein BRAFLDRAFT_86323 [Branchiostoma floridae]
gi|229275654|gb|EEN46471.1| hypothetical protein BRAFLDRAFT_86323 [Branchiostoma floridae]
Length = 1101
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 13 NIKRRYKT---PAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
N KRR +T Q+ LE+ Y + YP +E + VAE GLTE V W+ +RR K+ R
Sbjct: 164 NRKRRARTVFSAQQLKRLEEEYKKCSYPDKERRQTVAEATGLTEGCVRIWYQNRRAKDHR 223
Query: 70 L 70
L
Sbjct: 224 L 224
>gi|170649681|gb|ACB21266.1| homeobox protein Hox-A9 (predicted) [Callicebus moloch]
Length = 273
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 210 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 269
Query: 75 A 75
A
Sbjct: 270 A 270
>gi|348522807|ref|XP_003448915.1| PREDICTED: homeobox protein Hox-A9-like [Oreochromis niloticus]
Length = 264
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q++ LEK + + Y T + + +VA + LTE+QV WF +RR+K K+ + D
Sbjct: 200 KRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDG 259
Query: 75 A 75
A
Sbjct: 260 A 260
>gi|340519118|gb|EGR49357.1| transcription factor-like protein [Trichoderma reesei QM6a]
Length = 623
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
Q+ LE +N++ PT ++ ++AE+I +TE+ V WF +RR K K L+
Sbjct: 85 QLTTLEMEFNKNPTPTASVRDRIAEEINMTERSVQIWFQNRRAKIKMLA 133
>gi|122920443|pdb|2HOS|A Chain A, Phage-selected Homeodomain Bound To Unmodified Dna
gi|122920444|pdb|2HOS|B Chain B, Phage-selected Homeodomain Bound To Unmodified Dna
gi|122920448|pdb|2HOT|A Chain A, Phage Selected Homeodomain Bound To Modified Dna
gi|122920449|pdb|2HOT|B Chain B, Phage Selected Homeodomain Bound To Modified Dna
Length = 63
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
Q+ L++ +NE++Y TE + Q++ ++GL E QV GWF + R K K+
Sbjct: 15 QLARLKREFNENRYLTERRRQQLSSELGLNEAQVKGWFKNMRAKIKK 61
>gi|426257248|ref|XP_004022243.1| PREDICTED: homeobox protein CDX-4 [Ovis aries]
Length = 283
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 7 KVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+V+ + K +Y+ T Q + LEK ++ ++Y T KS++A +GL+E+QV WF +R
Sbjct: 164 QVTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNR 223
Query: 64 RLKEKRL 70
R KE+++
Sbjct: 224 RAKERKM 230
>gi|357626566|gb|EHJ76617.1| putative fushi-tarazu-like protein [Danaus plexippus]
Length = 433
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
R+ T Q + LEK ++ +KY + + +V+ +GLTE+Q+ WF +RR+K K+
Sbjct: 306 RQTYTRFQTLELEKEFHFNKYLSRRRRIEVSHALGLTERQIKIWFQNRRMKAKK 359
>gi|291407703|ref|XP_002720160.1| PREDICTED: caudal type homeobox 4 [Oryctolagus cuniculus]
Length = 284
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 7 KVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+V+ + K +Y+ T Q + LEK ++ ++Y T KS++A +GL+E+QV WF +R
Sbjct: 165 QVTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNR 224
Query: 64 RLKEKRL 70
R KE+++
Sbjct: 225 RAKERKM 231
>gi|284005076|ref|NP_001164874.1| homeobox protein Hox-A9 [Oryctolagus cuniculus]
gi|217418310|gb|ACK44312.1| homeobox A9 (predicted) [Oryctolagus cuniculus]
Length = 276
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 213 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 272
Query: 75 A 75
A
Sbjct: 273 A 273
>gi|149064382|gb|EDM14585.1| caudal type homeo box 1 (predicted) [Rattus norvegicus]
Length = 138
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE++++
Sbjct: 30 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN 78
>gi|345323600|ref|XP_001509421.2| PREDICTED: homeobox protein Hox-A9-like [Ornithorhynchus anatinus]
Length = 271
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 208 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 267
Query: 75 A 75
A
Sbjct: 268 A 268
>gi|133777136|gb|AAH96252.2| CDX1 protein [Homo sapiens]
gi|133778066|gb|AAI27123.2| CDX1 protein [Homo sapiens]
Length = 154
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T KS++A +GLTE+QV WF +RR KE+++
Sbjct: 54 QRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 101
>gi|82621659|gb|ABB86501.1| anthox1a-ANTP class homeobox protein, partial [Nematostella
vectensis]
gi|110338995|gb|ABG67761.1| HOXE, partial [Nematostella vectensis]
Length = 60
Score = 44.7 bits (104), Expect = 0.13, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
K+ KR T Q++ LEK ++ +Y T+E ++++A + LTE+QV WF +RR+K K+
Sbjct: 1 KHRKRMAYTRIQLLELEKEFHFTRYLTKERRTEMARMLDLTERQVKIWFQNRRMKWKK 58
>gi|30584147|gb|AAP36322.1| Homo sapiens homeo box A9 [synthetic construct]
gi|60653827|gb|AAX29606.1| homeobox A9 [synthetic construct]
Length = 273
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 209 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 268
Query: 75 A 75
A
Sbjct: 269 A 269
>gi|123320|sp|P10178.1|HMB3_TRIGR RecName: Full=Homeobox protein HB3
gi|1335679|emb|CAA31544.1| unnamed protein product [Tripneustes gratilla]
Length = 108
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
T Q + LEK ++ +Y T + ++A+ +GL+E+Q+ WF +RR+K KR
Sbjct: 35 TRQQTLELEKEFHFSRYVTRRRRFEIAQSLGLSERQIKIWFQNRRMKWKR 84
>gi|405959145|gb|EKC25209.1| Homeobox protein MOX-2 [Crassostrea gigas]
Length = 242
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 8 VSLEKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKE 67
+S++ +R T Q+ LEK + H Y T + ++A + LTE+QV WF +RR+K
Sbjct: 143 LSVKPRKERTAFTKHQIRELEKEFAVHNYLTRLRRYEIAVALDLTERQVKVWFQNRRMKW 202
Query: 68 KRL 70
KR+
Sbjct: 203 KRV 205
>gi|403287997|ref|XP_003935204.1| PREDICTED: homeobox protein Hox-A9 [Saimiri boliviensis
boliviensis]
Length = 273
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 210 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 269
Query: 75 A 75
A
Sbjct: 270 A 270
>gi|477807|pir||B48428 homeotic protein Hox 1.7 (clone GPK5) - guinea pig
Length = 180
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 20 TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEA 75
T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D A
Sbjct: 122 TKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRA 177
>gi|1127810|gb|AAB04107.1| Hoxa-1 [Danio rerio]
Length = 308
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 11 EKNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
++NI R T Q+ LEK ++ +KY T + +VA + L E QV WF +RR+K+K+
Sbjct: 207 QQNIIRTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQVKIWFQNRRMKQKK 265
>gi|387915092|gb|AFK11155.1| homeobox protein HoxD8 [Callorhinchus milii]
Length = 238
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ +GLTE+QV WF +RR+K K+ + + F R +
Sbjct: 157 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPTSRNE 216
Query: 83 RSSGV 87
GV
Sbjct: 217 EEEGV 221
>gi|380024040|ref|XP_003695815.1| PREDICTED: uncharacterized protein LOC100869792 [Apis florea]
Length = 310
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 12 KNIKRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
K I+ + +P+Q++ LE + ++ Y + Q+A+ + LTE QV WF +RR K KR+
Sbjct: 178 KRIRTAF-SPSQLLKLEHAFEKNHYVVGAERKQLAQALSLTETQVKVWFQNRRTKHKRMQ 236
Query: 72 VDE 74
+E
Sbjct: 237 QEE 239
>gi|345489555|ref|XP_001603758.2| PREDICTED: hypothetical protein LOC100120081 [Nasonia vitripennis]
Length = 523
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 7 KVSLEKNIKRRYKTP---AQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+VS K+ +R +T Q++ LEK +N ++Y + Q+AE + L+E+Q+ WF +R
Sbjct: 190 QVSQRKSSGKRSRTAYSSVQLVELEKQFNHNRYLCRPQRIQMAENLKLSERQIKIWFQNR 249
Query: 64 RLKEKR 69
R+K K+
Sbjct: 250 RMKFKK 255
>gi|317034149|ref|XP_001396098.2| homeobox and C2H2 transcription factor [Aspergillus niger CBS
513.88]
Length = 555
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 22 AQVMALEKFYNEHK-YPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
A+++ + N+H YPT+E K+ A+Q GLTEKQ+S WF + R + + +
Sbjct: 195 AKILRDWLYRNQHAPYPTDEQKAAFAQQTGLTEKQISTWFANARRRHRMV 244
>gi|301789619|ref|XP_002930226.1| PREDICTED: homeobox protein CDX-4-like [Ailuropoda melanoleuca]
gi|281338735|gb|EFB14319.1| hypothetical protein PANDA_020604 [Ailuropoda melanoleuca]
Length = 284
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 7 KVSLEKNIKRRYK---TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+V+ + K +Y+ T Q + LEK ++ ++Y T KS++A +GL+E+QV WF +R
Sbjct: 165 QVTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNR 224
Query: 64 RLKEKRL 70
R KE+++
Sbjct: 225 RAKERKM 231
>gi|444713457|gb|ELW54356.1| Homeobox protein Hox-A9 [Tupaia chinensis]
Length = 215
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 152 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 211
Query: 75 A 75
A
Sbjct: 212 A 212
>gi|383855980|ref|XP_003703488.1| PREDICTED: homeobox protein Nkx-6.2-like [Megachile rotundata]
Length = 365
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLK-EKRLSVDEAFVGGRQ 81
Q+ ALEK + + KY ++++A +G++E QV WF +RR K K+ + + A RQ
Sbjct: 266 QIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKKHAAEMATAKRRQ 325
Query: 82 DRSSGVIQDRGSGLRQDSCGSTK 104
+ GV+ + +D C T+
Sbjct: 326 EEVEGVVAE-----GEDGCSDTE 343
>gi|212538171|ref|XP_002149241.1| homeobox transcription factor (RfeB), putative [Talaromyces
marneffei ATCC 18224]
gi|210068983|gb|EEA23074.1| homeobox transcription factor (RfeB), putative [Talaromyces
marneffei ATCC 18224]
Length = 589
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 34/49 (69%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
Q++ LE+ +N++ PT ++ ++A++I +TE+ V WF +RR K K ++
Sbjct: 65 QLVTLEQEFNKNPTPTAAVRERIAQEINMTERSVQIWFQNRRAKIKMIA 113
>gi|21667881|gb|AAM74161.1|AF513712_1 Pax-6 protein [Euprymna scolopes]
Length = 503
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 4 EENKVSLEKNIKRRYK--TPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFC 61
E+ ++ L++ ++R T AQ+ ALEK + YP + ++A++I L E ++ WF
Sbjct: 266 EQMRIRLKRKLQRNRTSFTAAQIEALEKEFERTHYPDVFARERLAQKIDLPEARIQVWFS 325
Query: 62 HRRLKEKR 69
+RR K +R
Sbjct: 326 NRRAKWRR 333
>gi|397472857|ref|XP_003807950.1| PREDICTED: homeobox protein Hox-A9 [Pan paniscus]
Length = 272
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 209 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 268
Query: 75 A 75
A
Sbjct: 269 A 269
>gi|395519829|ref|XP_003764044.1| PREDICTED: homeobox protein Hox-D8, partial [Sarcophilus harrisii]
Length = 184
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ +GLTE+QV WF +RR+K K+ + + F RQ+
Sbjct: 102 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPVSRQE 161
Query: 83 RSSGVIQDRGSGLRQD 98
G + L +D
Sbjct: 162 GKEGETKTEAHDLEED 177
>gi|341889745|gb|EGT45680.1| CBN-PHP-3 protein [Caenorhabditis brenneri]
Length = 274
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKR 69
KR+ T AQ + LEK + + Y +++ + ++A+ + LTE+QV WF +RR+K+K+
Sbjct: 201 KRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMKDKK 255
>gi|301616793|ref|XP_002937836.1| PREDICTED: homeobox protein Nkx-6.2 [Xenopus (Silurana) tropicalis]
Length = 281
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 8 VSLEKNIKRRYKTPA----QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHR 63
+ L+K+ K+++ P Q+ ALEK + + KY ++++A +G+TE QV WF +R
Sbjct: 146 MVLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNR 205
Query: 64 RLKEKR 69
R K ++
Sbjct: 206 RTKWRK 211
>gi|299473901|gb|ADJ18233.1| Hox2 protein [Gibbula varia]
Length = 621
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 16 RRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLS 71
R T Q++ LEK ++ +KY + ++A + LTE+QV WF +RR+K KR S
Sbjct: 120 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKYKRQS 175
>gi|395830954|ref|XP_003788577.1| PREDICTED: homeobox protein Hox-A9 [Otolemur garnettii]
gi|202070730|gb|ACH95318.1| homeobox A9 (predicted) [Otolemur garnettii]
Length = 272
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 209 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 268
Query: 75 A 75
A
Sbjct: 269 A 269
>gi|114612547|ref|XP_001162954.1| PREDICTED: homeobox protein Hox-A9 [Pan troglodytes]
gi|410210788|gb|JAA02613.1| homeobox A9 [Pan troglodytes]
gi|410331925|gb|JAA34909.1| homeobox A9 [Pan troglodytes]
Length = 272
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 209 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 268
Query: 75 A 75
A
Sbjct: 269 A 269
>gi|99030988|gb|ABF61779.1| gastrulation brain homeodomain [Nematostella vectensis]
Length = 228
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
KR T Q++ LE+ ++ KY + E +S +A + LTE QV WF +RR K KR+
Sbjct: 134 KRTAFTSKQLLQLEREFHNKKYVSLEERSVIATNLNLTEVQVKIWFQNRRAKWKRV 189
>gi|23097236|ref|NP_689952.1| homeobox protein Hox-A9 [Homo sapiens]
gi|6166219|sp|P31269.4|HXA9_HUMAN RecName: Full=Homeobox protein Hox-A9; AltName: Full=Homeobox
protein Hox-1G
gi|14603109|gb|AAH10023.1| Homeobox A9 [Homo sapiens]
gi|16306819|gb|AAH06537.1| Homeobox A9 [Homo sapiens]
gi|30582819|gb|AAP35636.1| homeo box A9 [Homo sapiens]
gi|61362010|gb|AAX42140.1| homeobox A9 [synthetic construct]
gi|61362016|gb|AAX42141.1| homeobox A9 [synthetic construct]
gi|117645874|emb|CAL38404.1| hypothetical protein [synthetic construct]
gi|119614286|gb|EAW93880.1| hCG39031, isoform CRA_c [Homo sapiens]
gi|123984657|gb|ABM83674.1| homeobox A9 [synthetic construct]
gi|123998647|gb|ABM86962.1| homeobox A9 [synthetic construct]
gi|208966496|dbj|BAG73262.1| homeobox A9 [synthetic construct]
Length = 272
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 209 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 268
Query: 75 A 75
A
Sbjct: 269 A 269
>gi|74267513|dbj|BAE44255.1| hoxA9a [Oryzias latipes]
gi|83016927|dbj|BAE53459.1| hoxA9a [Oryzias latipes]
Length = 263
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q++ LEK + + Y T + + +VA + LTE+QV WF +RR+K K+ + D
Sbjct: 199 KRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKDG 258
Query: 75 A 75
A
Sbjct: 259 A 259
>gi|392346421|ref|XP_003749540.1| PREDICTED: uncharacterized protein LOC100912020 [Rattus norvegicus]
Length = 244
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDEAFVGGRQD 82
Q + LEK + + Y T + + +V+ + LTE+QV WF +RR+K K+ + + F R +
Sbjct: 162 QTLELEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQNRRMKWKKENNRDKFPASRPE 221
Query: 83 RSSGVIQDRGSGLRQDSC 100
G + SGL +D
Sbjct: 222 AKDGDPKKEVSGLEEDGA 239
>gi|354479671|ref|XP_003502033.1| PREDICTED: homeobox protein Hox-A9-like [Cricetulus griseus]
gi|344252755|gb|EGW08859.1| Homeobox protein Hox-A9 [Cricetulus griseus]
Length = 271
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 208 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 267
Query: 75 A 75
A
Sbjct: 268 A 268
>gi|326928589|ref|XP_003210459.1| PREDICTED: homeobox protein CDX-1-like [Meleagris gallopavo]
Length = 260
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 23 QVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRL 70
Q + LEK ++ +Y T K+++A +GLTE+QV WF +RR KE+++
Sbjct: 160 QRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKERKV 207
>gi|109067063|ref|XP_001091402.1| PREDICTED: homeobox protein Hox-A9 [Macaca mulatta]
gi|355560737|gb|EHH17423.1| Homeobox protein Hox-1G [Macaca mulatta]
Length = 272
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 15 KRRYKTPAQVMALEKFYNEHKYPTEEMKSQVAEQIGLTEKQVSGWFCHRRLKEKRLSVDE 74
KR T Q + LEK + + Y T + + +VA + LTE+QV WF +RR+K K+++ D
Sbjct: 209 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 268
Query: 75 A 75
A
Sbjct: 269 A 269
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.127 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,350,621,152
Number of Sequences: 23463169
Number of extensions: 376147905
Number of successful extensions: 773856
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11300
Number of HSP's successfully gapped in prelim test: 1589
Number of HSP's that attempted gapping in prelim test: 761040
Number of HSP's gapped (non-prelim): 14306
length of query: 513
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 366
effective length of database: 8,910,109,524
effective search space: 3261100085784
effective search space used: 3261100085784
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 79 (35.0 bits)