Query 010322
Match_columns 513
No_of_seqs 434 out of 3304
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 23:10:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010322.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010322hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00203 glutamyl-tRNA reducta 100.0 8E-102 2E-106 833.9 43.0 457 41-497 61-517 (519)
2 PRK13940 glutamyl-tRNA reducta 100.0 1.3E-92 2.9E-97 746.4 42.0 413 63-496 1-413 (414)
3 COG0373 HemA Glutamyl-tRNA red 100.0 2E-92 4.3E-97 733.3 37.1 413 63-495 1-413 (414)
4 TIGR01035 hemA glutamyl-tRNA r 100.0 6E-85 1.3E-89 692.4 39.8 417 65-494 1-417 (417)
5 PRK00045 hemA glutamyl-tRNA re 100.0 2.7E-84 5.8E-89 689.2 41.1 420 63-496 1-420 (423)
6 PRK00676 hemA glutamyl-tRNA re 100.0 9.4E-68 2E-72 538.9 26.7 310 63-403 1-314 (338)
7 cd05213 NAD_bind_Glutamyl_tRNA 100.0 6.3E-68 1.4E-72 542.6 23.7 309 65-386 1-310 (311)
8 PF05201 GlutR_N: Glutamyl-tRN 100.0 4.1E-44 8.9E-49 329.5 4.3 152 68-219 1-152 (152)
9 PF01488 Shikimate_DH: Shikima 99.9 4.6E-24 1E-28 192.9 10.4 134 234-375 2-135 (135)
10 PRK14982 acyl-ACP reductase; P 99.8 6.9E-19 1.5E-23 181.0 19.6 235 154-410 51-312 (340)
11 PF00745 GlutR_dimer: Glutamyl 99.7 1.6E-17 3.5E-22 142.4 8.8 100 389-494 2-101 (101)
12 COG0169 AroE Shikimate 5-dehyd 99.7 1.7E-15 3.6E-20 152.5 18.0 224 145-409 23-268 (283)
13 PRK12549 shikimate 5-dehydroge 99.7 1.7E-15 3.6E-20 153.6 17.9 226 145-408 22-268 (284)
14 TIGR01809 Shik-DH-AROM shikima 99.7 4.4E-15 9.6E-20 150.4 18.2 229 145-408 22-272 (282)
15 KOG0024 Sorbitol dehydrogenase 99.6 1.8E-16 4E-21 158.5 7.3 235 153-406 64-333 (354)
16 PRK00258 aroE shikimate 5-dehy 99.6 2E-14 4.4E-19 145.3 19.7 221 145-408 22-262 (278)
17 PRK12749 quinate/shikimate deh 99.6 2.4E-14 5.2E-19 145.3 19.4 226 145-408 24-274 (288)
18 PRK14027 quinate/shikimate deh 99.6 2.5E-14 5.5E-19 144.7 19.1 229 145-408 21-270 (283)
19 PRK12548 shikimate 5-dehydroge 99.6 2.1E-13 4.6E-18 138.6 18.9 225 145-408 26-277 (289)
20 PRK12550 shikimate 5-dehydroge 99.5 4.5E-13 9.7E-18 134.9 18.7 216 146-409 26-258 (272)
21 TIGR00507 aroE shikimate 5-deh 99.5 6.9E-13 1.5E-17 133.5 18.8 219 145-408 17-255 (270)
22 PRK09310 aroDE bifunctional 3- 99.5 9.6E-13 2.1E-17 142.5 18.3 225 145-423 232-472 (477)
23 COG1063 Tdh Threonine dehydrog 99.5 1.5E-13 3.3E-18 143.4 9.4 214 153-380 58-310 (350)
24 cd01080 NAD_bind_m-THF_DH_Cycl 99.4 1.2E-12 2.5E-17 122.7 11.3 96 226-355 26-122 (168)
25 TIGR02992 ectoine_eutC ectoine 99.3 3.8E-12 8.3E-17 131.6 10.8 123 245-375 128-252 (326)
26 PLN02520 bifunctional 3-dehydr 99.3 3.9E-11 8.4E-16 131.6 19.0 221 145-409 269-517 (529)
27 COG1064 AdhP Zn-dependent alco 99.3 6.4E-12 1.4E-16 128.9 7.3 181 152-349 59-261 (339)
28 PRK08291 ectoine utilization p 99.3 2E-11 4.3E-16 126.5 11.0 141 222-376 114-256 (330)
29 TIGR03366 HpnZ_proposed putati 99.2 3.3E-11 7.1E-16 121.5 7.8 183 154-348 2-219 (280)
30 cd01078 NAD_bind_H4MPT_DH NADP 99.1 5.7E-10 1.2E-14 106.7 12.8 129 224-361 4-141 (194)
31 TIGR00518 alaDH alanine dehydr 99.1 1.2E-10 2.7E-15 122.3 7.1 125 244-376 165-304 (370)
32 PRK09880 L-idonate 5-dehydroge 99.1 3.9E-10 8.5E-15 116.9 9.4 179 153-348 62-267 (343)
33 PRK06141 ornithine cyclodeamin 99.1 1.5E-09 3.3E-14 111.8 13.1 123 243-376 122-247 (314)
34 TIGR02853 spore_dpaA dipicolin 99.1 2.6E-09 5.6E-14 108.6 14.5 138 222-374 128-266 (287)
35 PRK06407 ornithine cyclodeamin 99.0 2E-09 4.2E-14 110.2 12.4 123 245-377 116-242 (301)
36 PRK07340 ornithine cyclodeamin 99.0 3.1E-09 6.8E-14 108.9 13.5 122 243-377 122-246 (304)
37 cd01065 NAD_bind_Shikimate_DH 99.0 5.6E-09 1.2E-13 95.7 13.5 136 243-405 16-154 (155)
38 PRK08618 ornithine cyclodeamin 99.0 2.8E-09 6E-14 110.3 12.2 123 244-377 125-251 (325)
39 PRK06823 ornithine cyclodeamin 99.0 4.6E-09 9.9E-14 108.1 12.7 121 245-375 127-250 (315)
40 PRK08306 dipicolinate synthase 99.0 1.3E-08 2.9E-13 103.9 16.1 140 222-376 129-269 (296)
41 cd08230 glucose_DH Glucose deh 99.0 1.7E-09 3.8E-14 112.5 9.1 185 152-349 59-271 (355)
42 TIGR02371 ala_DH_arch alanine 99.0 6.9E-09 1.5E-13 107.4 13.2 121 245-376 127-250 (325)
43 cd05311 NAD_bind_2_malic_enz N 98.9 6.4E-09 1.4E-13 102.2 11.9 117 222-352 2-131 (226)
44 TIGR02819 fdhA_non_GSH formald 98.9 3.9E-09 8.5E-14 111.9 9.3 183 152-349 63-301 (393)
45 cd08239 THR_DH_like L-threonin 98.9 8.6E-09 1.9E-13 106.3 11.5 182 152-348 56-263 (339)
46 cd08237 ribitol-5-phosphate_DH 98.9 5.6E-09 1.2E-13 108.4 9.5 179 153-349 61-258 (341)
47 PF02423 OCD_Mu_crystall: Orni 98.9 2.3E-08 5E-13 103.0 13.0 120 245-375 127-251 (313)
48 COG1062 AdhC Zn-dependent alco 98.8 1.6E-08 3.6E-13 102.7 11.0 185 152-351 57-289 (366)
49 PRK07589 ornithine cyclodeamin 98.8 2.9E-08 6.3E-13 103.3 12.9 120 245-375 128-252 (346)
50 TIGR01202 bchC 2-desacetyl-2-h 98.8 1.5E-08 3.3E-13 103.7 10.7 166 152-349 60-233 (308)
51 PRK10309 galactitol-1-phosphat 98.8 1.1E-08 2.3E-13 106.1 9.0 181 153-348 56-261 (347)
52 PLN02586 probable cinnamyl alc 98.8 1.4E-08 3.1E-13 106.2 8.3 182 153-348 69-279 (360)
53 TIGR03201 dearomat_had 6-hydro 98.8 2.2E-08 4.7E-13 104.1 9.4 180 153-349 56-274 (349)
54 PLN02178 cinnamyl-alcohol dehy 98.7 6.5E-08 1.4E-12 102.0 11.1 183 153-348 63-274 (375)
55 TIGR02822 adh_fam_2 zinc-bindi 98.7 4.4E-08 9.5E-13 101.2 9.2 178 152-348 58-255 (329)
56 TIGR02818 adh_III_F_hyde S-(hy 98.7 9.4E-08 2E-12 100.2 10.2 182 152-348 57-288 (368)
57 cd08281 liver_ADH_like1 Zinc-d 98.6 6E-08 1.3E-12 101.7 8.4 183 153-349 64-292 (371)
58 PRK06046 alanine dehydrogenase 98.6 2.9E-07 6.2E-12 95.4 13.1 120 245-376 128-251 (326)
59 TIGR00561 pntA NAD(P) transhyd 98.6 7.3E-07 1.6E-11 96.8 16.1 143 227-378 136-320 (511)
60 COG5322 Predicted dehydrogenas 98.6 6.2E-07 1.3E-11 88.2 13.7 187 218-426 137-340 (351)
61 PLN02740 Alcohol dehydrogenase 98.6 1.3E-07 2.8E-12 99.6 9.8 181 153-348 68-301 (381)
62 PLN02827 Alcohol dehydrogenase 98.6 1.5E-07 3.2E-12 99.2 10.0 182 153-348 66-296 (378)
63 cd00401 AdoHcyase S-adenosyl-L 98.6 1.2E-07 2.6E-12 100.6 9.2 81 243-332 199-279 (413)
64 COG2423 Predicted ornithine cy 98.6 2.8E-07 6E-12 95.0 11.3 122 245-376 129-254 (330)
65 PRK09424 pntA NAD(P) transhydr 98.5 1.2E-06 2.5E-11 95.5 15.0 139 227-374 137-317 (509)
66 cd08233 butanediol_DH_like (2R 98.5 7.4E-07 1.6E-11 92.4 12.9 182 152-348 66-273 (351)
67 cd08300 alcohol_DH_class_III c 98.5 3.6E-07 7.9E-12 95.7 10.0 181 153-348 59-289 (368)
68 TIGR03451 mycoS_dep_FDH mycoth 98.5 4E-07 8.7E-12 94.9 10.2 182 153-348 57-277 (358)
69 PRK06199 ornithine cyclodeamin 98.5 7.6E-07 1.6E-11 94.0 10.6 87 245-331 154-251 (379)
70 cd08277 liver_alcohol_DH_like 98.4 6.7E-07 1.4E-11 93.6 9.5 182 153-348 58-287 (365)
71 PRK14175 bifunctional 5,10-met 98.4 1.2E-06 2.6E-11 88.6 10.5 95 227-355 141-236 (286)
72 PLN02514 cinnamyl-alcohol dehy 98.4 1.1E-06 2.3E-11 91.9 10.5 182 153-348 66-276 (357)
73 PRK10083 putative oxidoreducta 98.4 9.1E-07 2E-11 91.0 9.7 182 152-348 55-260 (339)
74 cd08301 alcohol_DH_plants Plan 98.4 7.1E-07 1.5E-11 93.4 8.8 182 153-348 59-290 (369)
75 PF00670 AdoHcyase_NAD: S-aden 98.4 2.7E-06 5.8E-11 78.9 11.2 97 243-355 20-117 (162)
76 KOG0023 Alcohol dehydrogenase, 98.4 4.4E-07 9.4E-12 91.6 6.3 187 152-349 67-281 (360)
77 KOG0022 Alcohol dehydrogenase, 98.4 6.7E-07 1.5E-11 89.9 7.3 184 152-349 63-296 (375)
78 PRK05476 S-adenosyl-L-homocyst 98.4 6.7E-06 1.4E-10 87.7 15.0 93 243-351 209-301 (425)
79 PRK14192 bifunctional 5,10-met 98.4 9.4E-06 2E-10 82.4 15.4 78 242-351 155-233 (283)
80 PF03446 NAD_binding_2: NAD bi 98.4 6.2E-07 1.3E-11 83.5 6.0 91 247-349 2-94 (163)
81 PLN02702 L-idonate 5-dehydroge 98.3 2.5E-06 5.4E-11 89.0 10.7 182 153-348 76-286 (364)
82 cd08238 sorbose_phosphate_red 98.3 1.1E-06 2.4E-11 93.6 8.0 184 152-346 64-287 (410)
83 cd08285 NADP_ADH NADP(H)-depen 98.3 3.2E-06 7E-11 87.6 10.5 181 152-348 55-267 (351)
84 cd08231 MDR_TM0436_like Hypoth 98.3 3E-06 6.5E-11 88.2 10.2 180 153-347 57-280 (361)
85 cd08293 PTGR2 Prostaglandin re 98.3 6.9E-06 1.5E-10 84.7 12.7 170 153-347 71-254 (345)
86 PF02826 2-Hacid_dh_C: D-isome 98.2 4.3E-06 9.3E-11 79.1 9.0 93 242-349 32-127 (178)
87 COG2084 MmsB 3-hydroxyisobutyr 98.2 3E-06 6.5E-11 85.7 8.4 71 247-323 1-71 (286)
88 cd08287 FDH_like_ADH3 formalde 98.2 4.3E-06 9.3E-11 86.2 9.5 181 152-347 55-268 (345)
89 TIGR00936 ahcY adenosylhomocys 98.2 2E-05 4.3E-10 83.7 13.8 81 243-332 192-272 (406)
90 cd01075 NAD_bind_Leu_Phe_Val_D 98.2 2E-05 4.4E-10 76.0 12.7 93 242-350 24-116 (200)
91 PF03807 F420_oxidored: NADP o 98.2 4.1E-06 8.8E-11 70.5 6.6 92 248-350 1-95 (96)
92 cd08299 alcohol_DH_class_I_II_ 98.2 6.4E-06 1.4E-10 86.7 9.0 184 153-349 63-294 (373)
93 cd08296 CAD_like Cinnamyl alco 98.1 9.7E-06 2.1E-10 83.5 9.9 180 153-348 57-260 (333)
94 cd08255 2-desacetyl-2-hydroxye 98.1 2.2E-05 4.7E-10 78.3 11.6 169 152-347 22-190 (277)
95 COG0604 Qor NADPH:quinone redu 98.1 1.2E-05 2.5E-10 83.5 9.7 175 152-349 59-243 (326)
96 cd08256 Zn_ADH2 Alcohol dehydr 98.1 9.9E-06 2.2E-10 83.9 9.1 161 153-321 65-255 (350)
97 cd05191 NAD_bind_amino_acid_DH 98.1 3.3E-05 7.2E-10 64.1 10.5 68 242-349 19-86 (86)
98 cd05188 MDR Medium chain reduc 98.1 2.7E-05 5.9E-10 76.4 11.8 180 153-348 32-233 (271)
99 PTZ00075 Adenosylhomocysteinas 98.1 1.5E-05 3.2E-10 85.7 10.4 94 242-351 250-343 (476)
100 cd08269 Zn_ADH9 Alcohol dehydr 98.1 3.1E-05 6.6E-10 78.2 11.5 151 153-322 54-211 (312)
101 cd08265 Zn_ADH3 Alcohol dehydr 98.0 1.4E-05 3E-10 84.3 8.8 183 153-347 90-307 (384)
102 cd08232 idonate-5-DH L-idonate 98.0 2.5E-05 5.5E-10 80.3 10.3 161 153-322 56-244 (339)
103 COG0686 Ald Alanine dehydrogen 98.0 2E-05 4.4E-10 79.4 8.5 129 244-380 166-309 (371)
104 cd05285 sorbitol_DH Sorbitol d 98.0 3.6E-05 7.9E-10 79.5 10.9 179 153-347 57-265 (343)
105 cd08291 ETR_like_1 2-enoyl thi 98.0 6.7E-05 1.5E-09 76.9 12.7 161 153-348 63-243 (324)
106 PRK05396 tdh L-threonine 3-deh 98.0 2.9E-05 6.3E-10 80.1 9.9 180 153-348 60-264 (341)
107 cd05284 arabinose_DH_like D-ar 98.0 3.6E-05 7.8E-10 79.1 10.3 183 152-347 59-266 (340)
108 cd08278 benzyl_alcohol_DH Benz 98.0 4.9E-05 1.1E-09 79.6 11.3 186 153-348 58-286 (365)
109 cd08240 6_hydroxyhexanoate_dh_ 98.0 2.7E-05 6E-10 80.6 9.0 170 153-332 69-264 (350)
110 cd08282 PFDH_like Pseudomonas 97.9 2.8E-05 6.2E-10 81.6 8.8 160 152-320 55-254 (375)
111 PLN02928 oxidoreductase family 97.9 2.7E-05 5.8E-10 81.5 8.3 96 243-349 156-262 (347)
112 PRK13243 glyoxylate reductase; 97.9 4.3E-05 9.3E-10 79.5 9.5 91 243-349 147-240 (333)
113 cd08298 CAD2 Cinnamyl alcohol 97.9 3.2E-05 6.9E-10 79.1 8.4 177 153-348 61-257 (329)
114 PRK12491 pyrroline-5-carboxyla 97.9 2.6E-05 5.7E-10 78.8 7.6 92 247-349 3-97 (272)
115 cd08234 threonine_DH_like L-th 97.9 7.2E-05 1.6E-09 76.6 10.9 179 153-347 55-257 (334)
116 cd08284 FDH_like_2 Glutathione 97.9 4.6E-05 1E-09 78.4 9.4 171 153-332 56-256 (344)
117 PRK14194 bifunctional 5,10-met 97.9 4.3E-05 9.3E-10 77.9 8.8 92 227-352 142-234 (301)
118 PLN02494 adenosylhomocysteinas 97.9 5.9E-05 1.3E-09 81.0 10.2 93 243-351 251-343 (477)
119 PRK06718 precorrin-2 dehydroge 97.9 3.6E-05 7.8E-10 74.4 7.7 76 243-322 7-83 (202)
120 cd05212 NAD_bind_m-THF_DH_Cycl 97.9 0.00012 2.5E-09 66.8 10.4 97 228-358 12-109 (140)
121 COG1748 LYS9 Saccharopine dehy 97.8 3.9E-05 8.5E-10 80.7 7.8 75 247-321 2-80 (389)
122 cd08283 FDH_like_1 Glutathione 97.8 5.1E-05 1.1E-09 80.1 8.8 159 152-319 56-264 (386)
123 cd08236 sugar_DH NAD(P)-depend 97.8 0.00014 2.9E-09 75.0 11.7 161 153-322 55-240 (343)
124 PRK09422 ethanol-active dehydr 97.8 6.1E-05 1.3E-09 77.3 9.0 179 153-347 56-261 (338)
125 TIGR00692 tdh L-threonine 3-de 97.8 0.00015 3.2E-09 74.8 11.6 179 153-347 58-261 (340)
126 PRK14188 bifunctional 5,10-met 97.8 7.1E-05 1.5E-09 76.3 8.9 90 228-352 142-233 (296)
127 cd05279 Zn_ADH1 Liver alcohol 97.8 4.3E-05 9.2E-10 80.0 7.5 183 152-348 55-286 (365)
128 cd08262 Zn_ADH8 Alcohol dehydr 97.8 0.00013 2.8E-09 75.1 10.6 157 153-320 66-244 (341)
129 TIGR00872 gnd_rel 6-phosphoglu 97.8 6.2E-05 1.3E-09 77.0 8.1 69 248-320 2-70 (298)
130 TIGR02356 adenyl_thiF thiazole 97.8 6.2E-05 1.3E-09 72.7 7.6 78 244-321 19-123 (202)
131 cd08246 crotonyl_coA_red croto 97.8 0.00012 2.5E-09 77.4 10.3 136 152-292 83-239 (393)
132 cd05283 CAD1 Cinnamyl alcohol 97.8 0.00014 3E-09 75.0 10.4 180 153-348 56-264 (337)
133 PRK07574 formate dehydrogenase 97.7 8.2E-05 1.8E-09 78.7 8.5 93 243-349 189-284 (385)
134 PRK15461 NADH-dependent gamma- 97.7 8.9E-05 1.9E-09 75.8 8.5 68 247-321 2-69 (296)
135 cd08242 MDR_like Medium chain 97.7 0.00012 2.5E-09 74.7 9.4 156 153-322 53-227 (319)
136 KOG0409 Predicted dehydrogenas 97.7 5.5E-05 1.2E-09 76.1 6.6 73 244-323 33-105 (327)
137 PLN02350 phosphogluconate dehy 97.7 7.3E-05 1.6E-09 81.4 7.9 74 247-323 7-86 (493)
138 PLN03139 formate dehydrogenase 97.7 9.9E-05 2.1E-09 78.1 8.4 93 243-349 196-291 (386)
139 cd08235 iditol_2_DH_like L-idi 97.7 0.00014 3E-09 74.9 9.3 179 153-347 56-265 (343)
140 COG0499 SAM1 S-adenosylhomocys 97.7 0.0013 2.9E-08 67.7 16.0 188 128-332 83-286 (420)
141 cd08270 MDR4 Medium chain dehy 97.7 0.00029 6.3E-09 70.9 11.3 168 153-348 54-223 (305)
142 PRK12480 D-lactate dehydrogena 97.7 0.00013 2.7E-09 75.9 8.7 89 243-349 143-234 (330)
143 COG2085 Predicted dinucleotide 97.7 0.00011 2.5E-09 70.7 7.6 94 247-352 2-96 (211)
144 PF01210 NAD_Gly3P_dh_N: NAD-d 97.7 9.9E-05 2.2E-09 68.3 6.8 73 248-321 1-81 (157)
145 PRK15469 ghrA bifunctional gly 97.7 8E-05 1.7E-09 76.8 6.8 91 243-349 133-226 (312)
146 PRK00257 erythronate-4-phospha 97.7 0.00025 5.4E-09 75.0 10.6 108 221-349 89-207 (381)
147 PRK06476 pyrroline-5-carboxyla 97.7 0.00011 2.4E-09 73.4 7.6 68 248-319 2-71 (258)
148 PRK13403 ketol-acid reductoiso 97.7 0.00013 2.9E-09 74.8 8.1 70 243-320 13-82 (335)
149 PRK15438 erythronate-4-phospha 97.7 0.0003 6.6E-09 74.2 11.0 109 220-349 88-207 (378)
150 cd08292 ETR_like_2 2-enoyl thi 97.6 0.00056 1.2E-08 69.5 12.6 169 153-348 61-239 (324)
151 cd08258 Zn_ADH4 Alcohol dehydr 97.6 0.00041 8.9E-09 70.7 11.6 181 153-348 58-265 (306)
152 PRK12490 6-phosphogluconate de 97.6 0.00019 4.1E-09 73.4 9.0 68 248-322 2-72 (299)
153 cd08264 Zn_ADH_like2 Alcohol d 97.6 0.00012 2.6E-09 74.7 7.5 175 153-348 57-254 (325)
154 cd08254 hydroxyacyl_CoA_DH 6-h 97.6 0.00019 4E-09 73.4 8.9 181 153-348 59-264 (338)
155 cd01079 NAD_bind_m-THF_DH NAD 97.6 0.00017 3.8E-09 68.8 7.8 105 243-360 59-167 (197)
156 PRK08410 2-hydroxyacid dehydro 97.6 0.00015 3.3E-09 74.7 8.0 79 243-333 142-223 (311)
157 PRK06436 glycerate dehydrogena 97.6 0.00014 3E-09 74.6 7.6 88 243-349 119-209 (303)
158 PRK09599 6-phosphogluconate de 97.6 0.00021 4.6E-09 73.1 9.0 70 248-321 2-71 (301)
159 PRK07680 late competence prote 97.6 0.00017 3.8E-09 72.7 8.1 69 248-320 2-73 (273)
160 cd08261 Zn_ADH7 Alcohol dehydr 97.6 0.00045 9.8E-09 71.0 11.3 159 153-321 56-239 (337)
161 COG0345 ProC Pyrroline-5-carbo 97.6 0.00019 4.1E-09 72.1 8.0 68 247-319 2-72 (266)
162 cd08245 CAD Cinnamyl alcohol d 97.6 0.0003 6.6E-09 71.9 9.6 180 152-347 55-256 (330)
163 PF01262 AlaDh_PNT_C: Alanine 97.6 0.00029 6.4E-09 65.9 8.7 99 243-350 17-140 (168)
164 PRK07502 cyclohexadienyl dehyd 97.6 0.0002 4.3E-09 73.5 8.2 73 245-321 5-78 (307)
165 PRK07634 pyrroline-5-carboxyla 97.6 0.00023 5E-09 70.2 8.4 71 246-321 4-78 (245)
166 cd08260 Zn_ADH6 Alcohol dehydr 97.6 0.00034 7.5E-09 72.1 9.9 161 153-322 57-246 (345)
167 PRK07679 pyrroline-5-carboxyla 97.6 0.00021 4.5E-09 72.4 8.1 71 246-321 3-77 (279)
168 cd08286 FDH_like_ADH2 formalde 97.6 0.00043 9.4E-09 71.4 10.4 160 153-321 57-247 (345)
169 PRK11559 garR tartronate semia 97.6 0.00025 5.5E-09 72.1 8.6 69 247-322 3-71 (296)
170 PRK14618 NAD(P)H-dependent gly 97.6 0.00025 5.4E-09 73.4 8.6 75 246-321 4-86 (328)
171 PRK05479 ketol-acid reductoiso 97.6 0.00019 4.2E-09 74.3 7.6 71 243-320 14-84 (330)
172 cd05291 HicDH_like L-2-hydroxy 97.5 0.00022 4.7E-09 73.3 8.0 73 247-321 1-80 (306)
173 TIGR01505 tartro_sem_red 2-hyd 97.5 0.00015 3.3E-09 73.7 6.8 67 248-321 1-67 (291)
174 COG0281 SfcA Malic enzyme [Ene 97.5 0.00055 1.2E-08 72.0 10.8 248 72-357 36-309 (432)
175 PRK06932 glycerate dehydrogena 97.5 0.00019 4.1E-09 74.1 7.3 87 243-349 144-233 (314)
176 PF02737 3HCDH_N: 3-hydroxyacy 97.5 0.00016 3.5E-09 68.6 6.3 73 248-322 1-91 (180)
177 PRK07066 3-hydroxybutyryl-CoA 97.5 0.00024 5.1E-09 73.5 7.9 75 246-321 7-95 (321)
178 cd05281 TDH Threonine dehydrog 97.5 0.00045 9.7E-09 71.3 10.0 161 153-322 60-244 (341)
179 PRK09260 3-hydroxybutyryl-CoA 97.5 0.00019 4.2E-09 72.9 7.1 75 247-322 2-94 (288)
180 PRK14189 bifunctional 5,10-met 97.5 0.00041 9E-09 70.3 9.4 91 228-352 142-233 (285)
181 PF03435 Saccharop_dh: Sacchar 97.5 0.00018 3.9E-09 76.0 7.2 72 249-320 1-78 (386)
182 KOG3007 Mu-crystallin [Amino a 97.5 0.00043 9.3E-09 68.5 9.1 86 246-331 138-229 (333)
183 PF07991 IlvN: Acetohydroxy ac 97.5 0.0002 4.3E-09 66.4 6.3 70 244-320 2-71 (165)
184 TIGR00873 gnd 6-phosphoglucona 97.5 0.00026 5.5E-09 76.9 8.2 74 249-323 2-77 (467)
185 COG1052 LdhA Lactate dehydroge 97.5 0.00027 5.8E-09 73.2 8.0 91 243-349 143-236 (324)
186 PLN03154 putative allyl alcoho 97.5 0.00052 1.1E-08 71.5 10.3 168 154-348 76-259 (348)
187 PTZ00142 6-phosphogluconate de 97.5 0.00021 4.6E-09 77.6 7.4 76 247-323 2-80 (470)
188 TIGR01915 npdG NADPH-dependent 97.5 0.0003 6.5E-09 68.7 7.7 99 247-354 1-106 (219)
189 cd08250 Mgc45594_like Mgc45594 97.5 0.0011 2.5E-08 67.6 12.4 168 153-347 63-237 (329)
190 COG0111 SerA Phosphoglycerate 97.5 0.00029 6.3E-09 73.0 7.9 83 243-333 139-224 (324)
191 PRK12475 thiamine/molybdopteri 97.5 0.00029 6.3E-09 73.4 7.9 78 244-321 22-128 (338)
192 PRK10792 bifunctional 5,10-met 97.5 0.00055 1.2E-08 69.4 9.5 91 228-352 143-234 (285)
193 cd05278 FDH_like Formaldehyde 97.4 0.0003 6.5E-09 72.4 7.4 180 152-347 56-267 (347)
194 PRK13771 putative alcohol dehy 97.4 0.00032 7E-09 71.8 7.4 177 153-348 57-256 (334)
195 cd08290 ETR 2-enoyl thioester 97.4 0.00076 1.7E-08 69.3 10.2 145 153-321 66-233 (341)
196 KOG0069 Glyoxylate/hydroxypyru 97.4 0.00031 6.8E-09 72.5 7.1 93 242-349 158-253 (336)
197 cd05312 NAD_bind_1_malic_enz N 97.4 0.0012 2.6E-08 66.7 11.1 116 226-352 6-143 (279)
198 PRK13302 putative L-aspartate 97.4 0.00047 1E-08 69.7 8.3 74 244-321 4-79 (271)
199 PRK08293 3-hydroxybutyryl-CoA 97.4 0.00036 7.8E-09 70.9 7.6 73 247-320 4-95 (287)
200 PRK11880 pyrroline-5-carboxyla 97.4 0.00043 9.4E-09 69.3 8.0 69 247-320 3-73 (267)
201 PF02882 THF_DHG_CYH_C: Tetrah 97.4 0.0012 2.7E-08 61.4 10.2 92 227-352 19-111 (160)
202 PF10727 Rossmann-like: Rossma 97.4 0.00011 2.4E-09 65.7 3.2 72 245-321 9-80 (127)
203 TIGR01692 HIBADH 3-hydroxyisob 97.4 0.00029 6.3E-09 71.6 6.6 65 251-322 1-65 (288)
204 PRK06487 glycerate dehydrogena 97.4 0.00036 7.7E-09 72.2 7.3 86 243-349 145-233 (317)
205 PRK08605 D-lactate dehydrogena 97.4 0.00045 9.9E-09 71.8 8.0 90 243-349 143-236 (332)
206 cd08294 leukotriene_B4_DH_like 97.4 0.0009 2E-08 68.2 10.1 93 244-347 142-241 (329)
207 PRK14179 bifunctional 5,10-met 97.4 0.00056 1.2E-08 69.3 8.3 91 228-352 142-233 (284)
208 PRK14176 bifunctional 5,10-met 97.4 0.00083 1.8E-08 68.1 9.5 89 228-350 148-237 (287)
209 PRK08655 prephenate dehydrogen 97.4 0.00043 9.2E-09 74.7 7.9 68 247-320 1-69 (437)
210 TIGR02825 B4_12hDH leukotriene 97.4 0.0012 2.5E-08 67.7 10.8 163 152-348 59-238 (325)
211 cd01487 E1_ThiF_like E1_ThiF_l 97.4 0.00041 8.9E-09 65.5 6.8 75 248-322 1-101 (174)
212 PLN02306 hydroxypyruvate reduc 97.4 0.00062 1.3E-08 72.2 8.9 99 243-349 162-272 (386)
213 PRK06719 precorrin-2 dehydroge 97.4 0.00035 7.7E-09 64.8 6.2 73 243-321 10-82 (157)
214 PLN02688 pyrroline-5-carboxyla 97.4 0.00041 8.9E-09 69.4 7.1 65 248-318 2-70 (266)
215 PRK08644 thiamine biosynthesis 97.4 0.00053 1.1E-08 66.8 7.5 78 244-321 26-129 (212)
216 PRK08762 molybdopterin biosynt 97.3 0.0006 1.3E-08 72.1 8.5 78 244-321 133-237 (376)
217 PRK06130 3-hydroxybutyryl-CoA 97.3 0.00065 1.4E-08 69.7 8.5 74 247-321 5-91 (311)
218 PRK00094 gpsA NAD(P)H-dependen 97.3 0.00055 1.2E-08 70.3 7.9 73 247-320 2-82 (325)
219 PRK15409 bifunctional glyoxyla 97.3 0.00057 1.2E-08 70.8 8.0 82 243-333 142-227 (323)
220 PRK14191 bifunctional 5,10-met 97.3 0.0011 2.4E-08 67.2 9.6 91 227-351 140-231 (285)
221 PRK07531 bifunctional 3-hydrox 97.3 0.00064 1.4E-08 74.5 8.6 74 247-321 5-92 (495)
222 TIGR01327 PGDH D-3-phosphoglyc 97.3 0.00077 1.7E-08 74.4 9.2 82 243-332 135-219 (525)
223 TIGR02354 thiF_fam2 thiamine b 97.3 0.00069 1.5E-08 65.4 7.7 77 244-320 19-121 (200)
224 PRK12771 putative glutamate sy 97.3 0.0016 3.4E-08 72.5 11.6 133 181-322 69-235 (564)
225 cd08259 Zn_ADH5 Alcohol dehydr 97.3 0.00048 1E-08 70.0 6.9 159 153-321 57-238 (332)
226 cd00762 NAD_bind_malic_enz NAD 97.3 0.0015 3.2E-08 65.0 10.0 119 224-352 4-144 (254)
227 PRK07417 arogenate dehydrogena 97.3 0.00066 1.4E-08 68.7 7.7 68 248-321 2-69 (279)
228 PLN02819 lysine-ketoglutarate 97.3 0.00069 1.5E-08 79.5 8.7 76 245-320 568-659 (1042)
229 TIGR01751 crot-CoA-red crotony 97.3 0.0011 2.4E-08 70.2 9.7 135 153-292 80-235 (398)
230 PF03949 Malic_M: Malic enzyme 97.3 0.00038 8.3E-09 69.3 5.6 102 242-352 21-144 (255)
231 TIGR02817 adh_fam_1 zinc-bindi 97.3 0.0023 4.9E-08 65.5 11.6 156 152-322 60-229 (336)
232 PRK06129 3-hydroxyacyl-CoA deh 97.3 0.00098 2.1E-08 68.5 8.8 74 247-321 3-94 (308)
233 PRK13304 L-aspartate dehydroge 97.3 0.00081 1.7E-08 67.7 8.1 69 247-320 2-72 (265)
234 PRK07819 3-hydroxybutyryl-CoA 97.3 0.00065 1.4E-08 69.2 7.4 74 247-322 6-97 (286)
235 cd08295 double_bond_reductase_ 97.3 0.002 4.4E-08 66.4 11.2 95 244-348 150-252 (338)
236 PRK11790 D-3-phosphoglycerate 97.3 0.00063 1.4E-08 72.8 7.6 80 243-333 148-230 (409)
237 cd05282 ETR_like 2-enoyl thioe 97.3 0.0016 3.4E-08 66.1 10.1 152 153-321 59-219 (323)
238 PRK13581 D-3-phosphoglycerate 97.3 0.001 2.2E-08 73.5 9.3 81 243-332 137-220 (526)
239 TIGR01470 cysG_Nterm siroheme 97.3 0.00088 1.9E-08 65.0 7.8 76 243-322 6-82 (205)
240 PRK07530 3-hydroxybutyryl-CoA 97.3 0.00074 1.6E-08 68.7 7.6 75 246-322 4-96 (292)
241 cd08244 MDR_enoyl_red Possible 97.2 0.0028 6E-08 64.3 11.8 171 153-347 62-241 (324)
242 cd08274 MDR9 Medium chain dehy 97.2 0.0023 5E-08 65.9 11.1 177 153-347 80-273 (350)
243 PRK14193 bifunctional 5,10-met 97.2 0.0016 3.4E-08 66.1 9.4 92 227-352 141-235 (284)
244 PF00107 ADH_zinc_N: Zinc-bind 97.2 0.00023 5.1E-09 62.8 3.2 112 256-377 1-126 (130)
245 PF00056 Ldh_1_N: lactate/mala 97.2 0.0013 2.9E-08 59.9 8.2 75 247-321 1-81 (141)
246 PRK14178 bifunctional 5,10-met 97.2 0.0015 3.3E-08 66.0 9.3 91 228-352 136-227 (279)
247 PRK15059 tartronate semialdehy 97.2 0.0011 2.3E-08 67.8 8.4 67 248-322 2-68 (292)
248 PRK14190 bifunctional 5,10-met 97.2 0.0015 3.3E-08 66.1 9.4 92 227-352 141-233 (284)
249 PRK12861 malic enzyme; Reviewe 97.2 0.0018 4E-08 73.7 10.8 134 205-357 143-297 (764)
250 PRK07688 thiamine/molybdopteri 97.2 0.00092 2E-08 69.8 7.9 78 244-321 22-128 (339)
251 PRK14180 bifunctional 5,10-met 97.2 0.0018 3.9E-08 65.6 9.6 92 227-352 141-233 (282)
252 PRK06035 3-hydroxyacyl-CoA deh 97.2 0.0011 2.3E-08 67.6 8.1 74 247-322 4-98 (291)
253 cd05276 p53_inducible_oxidored 97.2 0.0031 6.8E-08 63.1 11.4 153 152-321 59-220 (323)
254 PRK05597 molybdopterin biosynt 97.2 0.00082 1.8E-08 70.6 7.4 78 244-321 26-130 (355)
255 cd08289 MDR_yhfp_like Yhfp put 97.2 0.0034 7.4E-08 63.8 11.8 168 153-348 60-244 (326)
256 PLN02858 fructose-bisphosphate 97.2 0.00088 1.9E-08 81.4 8.4 72 245-323 3-74 (1378)
257 cd08297 CAD3 Cinnamyl alcohol 97.2 0.0012 2.6E-08 67.9 8.3 178 153-347 59-265 (341)
258 cd08263 Zn_ADH10 Alcohol dehyd 97.2 0.0018 4E-08 67.6 9.9 74 244-320 186-267 (367)
259 cd00757 ThiF_MoeB_HesA_family 97.2 0.0013 2.7E-08 64.8 8.1 79 244-322 19-124 (228)
260 TIGR02355 moeB molybdopterin s 97.2 0.0015 3.3E-08 64.8 8.5 79 244-322 22-127 (240)
261 cd08249 enoyl_reductase_like e 97.2 0.0019 4.2E-08 66.6 9.6 165 153-332 57-242 (339)
262 TIGR00465 ilvC ketol-acid redu 97.1 0.0011 2.5E-08 68.3 7.7 69 244-320 1-70 (314)
263 cd05286 QOR2 Quinone oxidoredu 97.1 0.0062 1.3E-07 60.8 12.8 170 153-347 57-235 (320)
264 PRK07232 bifunctional malic en 97.1 0.0019 4.2E-08 73.5 9.9 139 205-357 139-293 (752)
265 PRK05690 molybdopterin biosynt 97.1 0.0012 2.6E-08 65.7 7.4 78 244-321 30-134 (245)
266 cd08279 Zn_ADH_class_III Class 97.1 0.0022 4.8E-08 66.9 9.7 181 153-348 56-283 (363)
267 PF13241 NAD_binding_7: Putati 97.1 0.00062 1.3E-08 58.5 4.5 69 243-321 4-72 (103)
268 PRK05600 thiamine biosynthesis 97.1 0.0014 2.9E-08 69.3 7.9 78 244-321 39-143 (370)
269 PF01408 GFO_IDH_MocA: Oxidore 97.1 0.0017 3.6E-08 56.6 7.3 88 248-348 2-93 (120)
270 COG0300 DltE Short-chain dehyd 97.1 0.0025 5.5E-08 64.0 9.3 79 243-322 3-97 (265)
271 PRK12862 malic enzyme; Reviewe 97.1 0.0037 8.1E-08 71.6 11.8 135 204-356 146-300 (763)
272 smart00829 PKS_ER Enoylreducta 97.1 0.0038 8.2E-08 61.4 10.4 149 153-319 26-185 (288)
273 PF13460 NAD_binding_10: NADH( 97.1 0.00061 1.3E-08 63.6 4.5 68 249-321 1-72 (183)
274 cd08266 Zn_ADH_like1 Alcohol d 97.1 0.0022 4.8E-08 65.1 8.9 160 153-320 60-246 (342)
275 PRK08223 hypothetical protein; 97.1 0.0024 5.2E-08 64.9 8.9 77 244-320 25-128 (287)
276 TIGR03026 NDP-sugDHase nucleot 97.1 0.0012 2.6E-08 70.6 7.2 73 248-321 2-88 (411)
277 PRK14183 bifunctional 5,10-met 97.1 0.0026 5.7E-08 64.3 9.1 91 228-352 141-232 (281)
278 COG0569 TrkA K+ transport syst 97.0 0.0023 5.1E-08 62.9 8.6 74 247-321 1-78 (225)
279 PF00899 ThiF: ThiF family; I 97.0 0.0032 6.9E-08 56.6 8.8 76 246-321 2-104 (135)
280 PRK06545 prephenate dehydrogen 97.0 0.0014 3E-08 68.9 7.4 71 247-320 1-71 (359)
281 PLN02545 3-hydroxybutyryl-CoA 97.0 0.0018 3.8E-08 66.0 8.0 73 247-322 5-96 (295)
282 PRK14619 NAD(P)H-dependent gly 97.0 0.0011 2.3E-08 68.2 6.1 35 245-280 3-37 (308)
283 PRK08507 prephenate dehydrogen 97.0 0.0022 4.7E-08 64.8 8.3 68 248-321 2-70 (275)
284 cd05195 enoyl_red enoyl reduct 97.0 0.0058 1.3E-07 60.0 11.2 151 153-320 30-190 (293)
285 PRK10754 quinone oxidoreductas 97.0 0.006 1.3E-07 62.2 11.5 171 153-347 60-239 (327)
286 PRK14169 bifunctional 5,10-met 97.0 0.0033 7.2E-08 63.7 9.3 92 227-352 139-231 (282)
287 PRK15116 sulfur acceptor prote 97.0 0.0047 1E-07 62.3 10.4 79 244-322 28-134 (268)
288 PRK14173 bifunctional 5,10-met 97.0 0.0035 7.7E-08 63.6 9.5 92 227-352 138-230 (287)
289 PRK14177 bifunctional 5,10-met 97.0 0.0035 7.5E-08 63.5 9.3 91 227-351 142-233 (284)
290 PLN03209 translocon at the inn 97.0 0.0025 5.5E-08 70.4 8.9 77 243-320 77-170 (576)
291 PRK14106 murD UDP-N-acetylmura 97.0 0.0023 5E-08 68.9 8.6 76 244-320 3-79 (450)
292 PRK14172 bifunctional 5,10-met 97.0 0.0038 8.3E-08 63.1 9.3 92 227-352 141-233 (278)
293 PRK14170 bifunctional 5,10-met 97.0 0.0041 8.9E-08 63.0 9.5 91 228-352 141-232 (284)
294 PTZ00082 L-lactate dehydrogena 97.0 0.0027 5.9E-08 65.8 8.4 76 245-321 5-86 (321)
295 cd08243 quinone_oxidoreductase 97.0 0.0086 1.9E-07 60.3 12.0 173 153-347 59-238 (320)
296 cd05280 MDR_yhdh_yhfp Yhdh and 96.9 0.0045 9.7E-08 62.8 9.9 167 153-347 60-243 (325)
297 cd01483 E1_enzyme_family Super 96.9 0.0034 7.5E-08 56.8 7.9 74 248-321 1-101 (143)
298 PRK14166 bifunctional 5,10-met 96.9 0.004 8.6E-08 63.1 9.0 91 228-352 141-232 (282)
299 cd00755 YgdL_like Family of ac 96.9 0.0045 9.8E-08 61.1 9.3 79 244-322 9-115 (231)
300 PTZ00354 alcohol dehydrogenase 96.9 0.0083 1.8E-07 61.0 11.6 150 153-319 61-220 (334)
301 PRK00066 ldh L-lactate dehydro 96.9 0.0026 5.6E-08 65.8 7.8 76 244-321 4-85 (315)
302 PRK08268 3-hydroxy-acyl-CoA de 96.9 0.0025 5.3E-08 70.1 8.0 76 246-323 7-100 (507)
303 cd08248 RTN4I1 Human Reticulon 96.9 0.0053 1.2E-07 63.2 10.1 166 153-347 76-257 (350)
304 cd08252 AL_MDR Arginate lyase 96.9 0.011 2.4E-07 60.4 12.3 147 153-321 62-229 (336)
305 TIGR02279 PaaC-3OHAcCoADH 3-hy 96.9 0.0026 5.5E-08 69.9 8.0 76 245-322 4-97 (503)
306 cd01076 NAD_bind_1_Glu_DH NAD( 96.9 0.014 3E-07 57.5 12.4 97 242-350 27-137 (227)
307 PLN02256 arogenate dehydrogena 96.9 0.0032 6.9E-08 64.7 8.2 94 243-349 33-127 (304)
308 PRK11199 tyrA bifunctional cho 96.9 0.0041 8.9E-08 65.8 9.2 75 186-280 57-132 (374)
309 PRK06522 2-dehydropantoate 2-r 96.8 0.0036 7.9E-08 63.5 8.3 70 248-321 2-78 (304)
310 PLN02516 methylenetetrahydrofo 96.8 0.0055 1.2E-07 62.5 9.4 91 228-352 151-242 (299)
311 cd08276 MDR7 Medium chain dehy 96.8 0.0053 1.1E-07 62.4 9.4 159 153-319 60-239 (336)
312 PRK14187 bifunctional 5,10-met 96.8 0.0055 1.2E-07 62.4 9.3 91 228-352 144-235 (294)
313 COG2910 Putative NADH-flavin r 96.8 0.0022 4.7E-08 60.6 5.9 73 247-321 1-74 (211)
314 cd08241 QOR1 Quinone oxidoredu 96.8 0.0072 1.6E-07 60.5 10.3 150 153-319 60-218 (323)
315 cd01492 Aos1_SUMO Ubiquitin ac 96.8 0.0033 7.2E-08 60.5 7.3 78 244-321 19-122 (197)
316 cd08267 MDR1 Medium chain dehy 96.8 0.0049 1.1E-07 62.0 8.9 152 153-319 61-218 (319)
317 PLN02858 fructose-bisphosphate 96.8 0.011 2.4E-07 72.0 13.3 71 245-322 323-393 (1378)
318 PRK07231 fabG 3-ketoacyl-(acyl 96.8 0.0028 6E-08 61.9 6.7 75 244-319 3-91 (251)
319 PRK06928 pyrroline-5-carboxyla 96.8 0.0039 8.5E-08 63.1 7.9 70 247-320 2-75 (277)
320 PTZ00117 malate dehydrogenase; 96.8 0.0047 1E-07 63.9 8.6 76 245-321 4-85 (319)
321 cd01485 E1-1_like Ubiquitin ac 96.8 0.0064 1.4E-07 58.6 9.0 36 244-279 17-52 (198)
322 PLN03129 NADP-dependent malic 96.8 0.0056 1.2E-07 67.4 9.4 118 222-352 298-439 (581)
323 PRK05808 3-hydroxybutyryl-CoA 96.8 0.0044 9.6E-08 62.7 8.2 71 247-320 4-93 (282)
324 COG1712 Predicted dinucleotide 96.8 0.0038 8.2E-08 60.7 7.1 68 248-320 2-71 (255)
325 PRK08328 hypothetical protein; 96.8 0.0047 1E-07 60.9 8.1 36 244-279 25-60 (231)
326 PRK14171 bifunctional 5,10-met 96.8 0.007 1.5E-07 61.5 9.4 91 228-352 143-234 (288)
327 PRK14186 bifunctional 5,10-met 96.8 0.0071 1.5E-07 61.7 9.4 92 227-352 141-233 (297)
328 PRK05866 short chain dehydroge 96.7 0.0043 9.4E-08 63.0 7.9 77 243-320 37-128 (293)
329 PRK14620 NAD(P)H-dependent gly 96.7 0.0043 9.3E-08 64.1 7.9 73 248-321 2-83 (326)
330 PRK13529 malate dehydrogenase; 96.7 0.012 2.5E-07 64.7 11.4 123 222-352 272-420 (563)
331 PRK07411 hypothetical protein; 96.7 0.0057 1.2E-07 65.1 8.9 78 244-321 36-140 (390)
332 PRK06057 short chain dehydroge 96.7 0.0071 1.5E-07 59.6 9.0 77 243-320 4-90 (255)
333 cd08253 zeta_crystallin Zeta-c 96.7 0.014 3.1E-07 58.4 11.4 156 153-320 60-224 (325)
334 KOG1197 Predicted quinone oxid 96.7 0.0086 1.9E-07 59.3 9.2 166 152-349 66-247 (336)
335 PRK06223 malate dehydrogenase; 96.7 0.0053 1.1E-07 62.9 8.2 74 247-321 3-82 (307)
336 cd08273 MDR8 Medium chain dehy 96.7 0.011 2.5E-07 60.0 10.6 150 153-321 60-215 (331)
337 PRK05872 short chain dehydroge 96.7 0.0075 1.6E-07 61.2 9.2 77 243-320 6-96 (296)
338 PRK07825 short chain dehydroge 96.7 0.011 2.4E-07 58.8 10.3 76 244-320 3-89 (273)
339 PLN02897 tetrahydrofolate dehy 96.7 0.0076 1.7E-07 62.5 9.1 91 228-352 198-289 (345)
340 PRK14182 bifunctional 5,10-met 96.7 0.0087 1.9E-07 60.6 9.3 92 227-352 140-232 (282)
341 TIGR01381 E1_like_apg7 E1-like 96.7 0.0055 1.2E-07 68.2 8.5 56 223-278 307-370 (664)
342 PRK14181 bifunctional 5,10-met 96.7 0.0084 1.8E-07 60.9 9.2 92 227-352 136-232 (287)
343 COG4221 Short-chain alcohol de 96.7 0.0082 1.8E-07 59.2 8.8 76 243-319 3-91 (246)
344 PLN02616 tetrahydrofolate dehy 96.7 0.0089 1.9E-07 62.3 9.4 91 228-352 215-306 (364)
345 PRK14806 bifunctional cyclohex 96.6 0.0052 1.1E-07 70.6 8.6 70 247-320 4-74 (735)
346 PRK15057 UDP-glucose 6-dehydro 96.6 0.0052 1.1E-07 65.3 7.9 71 248-320 2-84 (388)
347 PRK07878 molybdopterin biosynt 96.6 0.0044 9.6E-08 66.0 7.3 78 244-321 40-144 (392)
348 PRK00141 murD UDP-N-acetylmura 96.6 0.0068 1.5E-07 66.1 8.9 74 243-320 12-85 (473)
349 PRK14168 bifunctional 5,10-met 96.6 0.009 1.9E-07 61.0 9.1 91 228-352 145-240 (297)
350 COG0287 TyrA Prephenate dehydr 96.6 0.0054 1.2E-07 62.3 7.4 73 246-322 3-77 (279)
351 cd01486 Apg7 Apg7 is an E1-lik 96.6 0.0082 1.8E-07 61.3 8.6 31 248-278 1-31 (307)
352 cd05211 NAD_bind_Glu_Leu_Phe_V 96.6 0.014 3E-07 57.2 10.0 95 242-349 19-127 (217)
353 PRK07326 short chain dehydroge 96.6 0.0073 1.6E-07 58.5 8.1 76 244-320 4-93 (237)
354 cd05288 PGDH Prostaglandin deh 96.6 0.012 2.6E-07 59.9 10.1 146 153-320 67-225 (329)
355 PRK12829 short chain dehydroge 96.6 0.01 2.2E-07 58.4 9.2 77 243-320 8-97 (264)
356 PLN02712 arogenate dehydrogena 96.6 0.0057 1.2E-07 69.4 8.2 95 242-349 365-460 (667)
357 PRK14185 bifunctional 5,10-met 96.6 0.01 2.2E-07 60.5 9.0 91 228-352 141-236 (293)
358 PRK07060 short chain dehydroge 96.6 0.0088 1.9E-07 58.2 8.4 77 243-320 6-88 (245)
359 PRK03369 murD UDP-N-acetylmura 96.6 0.0084 1.8E-07 65.7 9.0 73 244-321 10-82 (488)
360 TIGR03325 BphB_TodD cis-2,3-di 96.5 0.0059 1.3E-07 60.5 7.2 75 244-319 3-89 (262)
361 PRK06196 oxidoreductase; Provi 96.5 0.014 3E-07 59.8 10.1 77 243-320 23-110 (315)
362 cd05292 LDH_2 A subgroup of L- 96.5 0.0078 1.7E-07 62.0 8.2 72 248-321 2-79 (308)
363 PRK14174 bifunctional 5,10-met 96.5 0.011 2.4E-07 60.4 9.0 91 228-352 143-238 (295)
364 PRK12921 2-dehydropantoate 2-r 96.5 0.0075 1.6E-07 61.4 8.0 71 248-321 2-80 (305)
365 PRK06139 short chain dehydroge 96.5 0.0085 1.8E-07 62.2 8.5 76 243-320 4-95 (330)
366 PRK07523 gluconate 5-dehydroge 96.5 0.0071 1.5E-07 59.5 7.6 77 243-320 7-98 (255)
367 PRK08265 short chain dehydroge 96.5 0.0064 1.4E-07 60.4 7.2 75 243-319 3-90 (261)
368 PRK14184 bifunctional 5,10-met 96.5 0.01 2.2E-07 60.3 8.7 92 227-352 140-236 (286)
369 PRK14167 bifunctional 5,10-met 96.5 0.012 2.5E-07 60.2 9.1 92 227-352 140-236 (297)
370 PRK06500 short chain dehydroge 96.5 0.016 3.4E-07 56.5 9.9 76 243-320 3-91 (249)
371 TIGR02823 oxido_YhdH putative 96.5 0.013 2.8E-07 59.6 9.4 168 153-348 59-242 (323)
372 cd05289 MDR_like_2 alcohol deh 96.5 0.026 5.7E-07 56.1 11.5 154 152-320 61-219 (309)
373 TIGR02824 quinone_pig3 putativ 96.5 0.031 6.7E-07 56.1 12.0 152 152-320 59-219 (325)
374 PRK05717 oxidoreductase; Valid 96.5 0.0079 1.7E-07 59.3 7.4 76 243-320 7-95 (255)
375 PRK06200 2,3-dihydroxy-2,3-dih 96.5 0.011 2.4E-07 58.5 8.5 76 243-319 3-90 (263)
376 PRK08339 short chain dehydroge 96.5 0.012 2.7E-07 58.6 8.8 77 243-320 5-96 (263)
377 PRK06138 short chain dehydroge 96.4 0.009 2E-07 58.4 7.7 76 244-320 3-92 (252)
378 cd08251 polyketide_synthase po 96.4 0.02 4.3E-07 56.9 10.3 151 153-319 40-199 (303)
379 PTZ00317 NADP-dependent malic 96.4 0.019 4.1E-07 63.0 10.7 122 223-352 275-419 (559)
380 cd01491 Ube1_repeat1 Ubiquitin 96.4 0.01 2.2E-07 60.4 8.2 77 244-320 17-116 (286)
381 PRK06153 hypothetical protein; 96.4 0.0066 1.4E-07 63.9 6.9 79 244-322 174-279 (393)
382 PRK07063 short chain dehydroge 96.4 0.01 2.3E-07 58.5 8.1 77 243-320 4-97 (260)
383 cd08268 MDR2 Medium chain dehy 96.4 0.015 3.3E-07 58.4 9.4 177 152-348 59-244 (328)
384 PRK12828 short chain dehydroge 96.4 0.012 2.7E-07 56.6 8.3 77 243-320 4-93 (239)
385 cd00300 LDH_like L-lactate deh 96.4 0.0082 1.8E-07 61.6 7.2 72 249-321 1-78 (300)
386 PRK05867 short chain dehydroge 96.4 0.018 3.8E-07 56.7 9.3 77 243-320 6-97 (253)
387 KOG2017 Molybdopterin synthase 96.4 0.0072 1.6E-07 62.0 6.5 78 243-321 63-168 (427)
388 PRK09496 trkA potassium transp 96.4 0.01 2.2E-07 63.9 8.1 74 247-321 1-77 (453)
389 PRK01438 murD UDP-N-acetylmura 96.4 0.011 2.4E-07 64.3 8.5 76 243-320 13-89 (480)
390 COG0190 FolD 5,10-methylene-te 96.3 0.016 3.4E-07 58.4 8.7 87 232-352 144-231 (283)
391 PRK08267 short chain dehydroge 96.3 0.01 2.2E-07 58.6 7.5 74 247-321 2-89 (260)
392 cd01484 E1-2_like Ubiquitin ac 96.3 0.01 2.3E-07 58.7 7.4 32 248-279 1-32 (234)
393 cd05293 LDH_1 A subgroup of L- 96.3 0.01 2.3E-07 61.2 7.7 74 246-320 3-82 (312)
394 PRK06949 short chain dehydroge 96.3 0.013 2.8E-07 57.6 8.1 77 243-320 6-97 (258)
395 PRK06194 hypothetical protein; 96.3 0.0085 1.8E-07 60.1 6.9 78 243-321 3-95 (287)
396 PRK12939 short chain dehydroge 96.3 0.015 3.3E-07 56.6 8.6 77 243-320 4-95 (250)
397 TIGR01546 GAPDH-II_archae glyc 96.3 0.02 4.4E-07 59.4 9.8 93 249-348 1-107 (333)
398 COG0059 IlvC Ketol-acid reduct 96.3 0.0088 1.9E-07 60.6 6.8 71 244-321 16-86 (338)
399 PRK08085 gluconate 5-dehydroge 96.3 0.018 3.9E-07 56.6 9.1 77 243-320 6-97 (254)
400 PRK12439 NAD(P)H-dependent gly 96.3 0.01 2.2E-07 62.0 7.5 73 246-320 7-88 (341)
401 PF02558 ApbA: Ketopantoate re 96.3 0.014 3E-07 53.0 7.6 71 249-322 1-80 (151)
402 PLN02712 arogenate dehydrogena 96.3 0.012 2.6E-07 66.8 8.6 68 245-320 51-119 (667)
403 COG0240 GpsA Glycerol-3-phosph 96.3 0.012 2.5E-07 60.8 7.6 73 247-320 2-82 (329)
404 cd05290 LDH_3 A subgroup of L- 96.3 0.0095 2.1E-07 61.4 7.1 71 248-320 1-79 (307)
405 cd00650 LDH_MDH_like NAD-depen 96.3 0.0089 1.9E-07 60.0 6.7 73 249-321 1-82 (263)
406 PRK05562 precorrin-2 dehydroge 96.3 0.014 3.1E-07 57.2 7.8 74 244-321 23-97 (223)
407 PRK06182 short chain dehydroge 96.3 0.013 2.8E-07 58.4 7.8 74 245-320 2-85 (273)
408 PRK07890 short chain dehydroge 96.3 0.014 3E-07 57.3 7.9 76 244-320 3-93 (258)
409 CHL00194 ycf39 Ycf39; Provisio 96.3 0.0099 2.2E-07 61.0 7.1 70 247-319 1-74 (317)
410 PRK08277 D-mannonate oxidoredu 96.3 0.015 3.2E-07 58.2 8.1 77 243-320 7-98 (278)
411 PRK13394 3-hydroxybutyrate deh 96.3 0.013 2.7E-07 57.7 7.5 77 243-320 4-95 (262)
412 PRK07814 short chain dehydroge 96.2 0.016 3.6E-07 57.4 8.4 76 243-319 7-97 (263)
413 PRK07067 sorbitol dehydrogenas 96.2 0.017 3.7E-07 56.9 8.4 75 244-320 4-91 (257)
414 PF02254 TrkA_N: TrkA-N domain 96.2 0.017 3.6E-07 50.0 7.4 71 249-322 1-75 (116)
415 PF00106 adh_short: short chai 96.2 0.023 4.9E-07 51.9 8.6 75 247-321 1-92 (167)
416 PTZ00431 pyrroline carboxylate 96.2 0.0081 1.8E-07 60.2 6.0 64 246-321 3-69 (260)
417 PLN02253 xanthoxin dehydrogena 96.2 0.021 4.5E-07 57.1 9.0 77 243-320 15-105 (280)
418 PRK05708 2-dehydropantoate 2-r 96.2 0.013 2.8E-07 60.2 7.6 74 247-321 3-82 (305)
419 cd01339 LDH-like_MDH L-lactate 96.2 0.014 3E-07 59.8 7.8 72 249-321 1-78 (300)
420 cd01488 Uba3_RUB Ubiquitin act 96.2 0.016 3.5E-07 59.1 8.1 74 248-321 1-100 (291)
421 PRK07666 fabG 3-ketoacyl-(acyl 96.2 0.016 3.4E-07 56.4 7.8 77 243-320 4-95 (239)
422 PF01113 DapB_N: Dihydrodipico 96.2 0.0049 1.1E-07 54.8 3.8 70 248-317 2-75 (124)
423 PRK12429 3-hydroxybutyrate deh 96.2 0.016 3.4E-07 56.8 7.8 76 244-320 2-92 (258)
424 PRK02472 murD UDP-N-acetylmura 96.2 0.011 2.4E-07 63.7 7.2 76 244-320 3-79 (447)
425 PRK06172 short chain dehydroge 96.2 0.011 2.5E-07 57.9 6.7 47 243-290 4-51 (253)
426 PRK11730 fadB multifunctional 96.2 0.013 2.8E-07 67.2 8.0 36 247-283 314-349 (715)
427 PRK11064 wecC UDP-N-acetyl-D-m 96.2 0.01 2.2E-07 63.7 6.7 68 247-320 4-86 (415)
428 PLN00141 Tic62-NAD(P)-related 96.1 0.019 4.1E-07 56.7 8.2 77 243-320 14-96 (251)
429 COG1648 CysG Siroheme synthase 96.1 0.015 3.3E-07 56.5 7.3 75 243-321 9-84 (210)
430 PRK06180 short chain dehydroge 96.1 0.018 4E-07 57.6 8.2 75 245-320 3-89 (277)
431 TIGR03589 PseB UDP-N-acetylglu 96.1 0.022 4.8E-07 58.8 8.9 77 244-320 2-85 (324)
432 PRK07478 short chain dehydroge 96.1 0.017 3.7E-07 56.8 7.8 76 243-319 3-93 (254)
433 PRK09186 flagellin modificatio 96.1 0.014 3E-07 57.3 7.1 46 244-290 2-48 (256)
434 PRK09496 trkA potassium transp 96.1 0.044 9.6E-07 59.0 11.6 78 243-321 228-309 (453)
435 PRK09291 short chain dehydroge 96.1 0.026 5.6E-07 55.4 8.9 74 246-320 2-84 (257)
436 PRK07576 short chain dehydroge 96.1 0.014 2.9E-07 58.2 7.0 47 243-290 6-53 (264)
437 PRK14851 hypothetical protein; 96.1 0.012 2.6E-07 66.8 7.2 77 244-320 41-144 (679)
438 COG0673 MviM Predicted dehydro 96.1 0.02 4.3E-07 59.0 8.4 91 246-348 3-98 (342)
439 PRK08229 2-dehydropantoate 2-r 96.1 0.016 3.4E-07 60.1 7.7 70 247-321 3-85 (341)
440 PRK05876 short chain dehydroge 96.1 0.014 3.1E-07 58.6 7.2 77 243-320 3-94 (275)
441 PRK08217 fabG 3-ketoacyl-(acyl 96.1 0.013 2.9E-07 57.0 6.7 46 244-290 3-49 (253)
442 PRK07074 short chain dehydroge 96.1 0.021 4.5E-07 56.2 8.1 74 246-320 2-88 (257)
443 PRK12742 oxidoreductase; Provi 96.1 0.021 4.6E-07 55.3 8.0 76 243-320 3-86 (237)
444 PRK07062 short chain dehydroge 96.1 0.016 3.5E-07 57.3 7.2 77 243-320 5-98 (265)
445 TIGR01318 gltD_gamma_fam gluta 96.1 0.022 4.8E-07 62.0 8.9 76 245-322 140-239 (467)
446 PRK07774 short chain dehydroge 96.0 0.019 4.2E-07 56.0 7.6 77 243-320 3-94 (250)
447 PRK12826 3-ketoacyl-(acyl-carr 96.0 0.022 4.7E-07 55.4 7.9 78 243-321 3-95 (251)
448 PRK10538 malonic semialdehyde 96.0 0.022 4.7E-07 56.0 7.9 72 247-320 1-85 (248)
449 PRK05653 fabG 3-ketoacyl-(acyl 96.0 0.016 3.4E-07 56.1 6.8 46 244-290 3-49 (246)
450 PRK05225 ketol-acid reductoiso 96.0 0.007 1.5E-07 64.8 4.6 71 244-321 34-109 (487)
451 TIGR01763 MalateDH_bact malate 96.0 0.026 5.7E-07 58.0 8.6 74 247-321 2-81 (305)
452 PRK07109 short chain dehydroge 96.0 0.021 4.6E-07 59.2 8.0 77 243-320 5-96 (334)
453 PRK09242 tropinone reductase; 96.0 0.016 3.4E-07 57.2 6.7 76 243-319 6-98 (257)
454 TIGR02437 FadB fatty oxidation 96.0 0.019 4.1E-07 65.8 8.1 39 245-284 312-350 (714)
455 PRK08213 gluconate 5-dehydroge 96.0 0.039 8.4E-07 54.4 9.4 76 243-319 9-99 (259)
456 PRK12936 3-ketoacyl-(acyl-carr 96.0 0.04 8.8E-07 53.4 9.4 76 243-320 3-91 (245)
457 PLN02602 lactate dehydrogenase 96.0 0.023 5E-07 59.6 8.1 73 247-320 38-116 (350)
458 PRK14852 hypothetical protein; 96.0 0.015 3.3E-07 67.7 7.2 77 244-320 330-433 (989)
459 PRK08264 short chain dehydroge 96.0 0.013 2.9E-07 56.8 6.0 71 244-319 4-83 (238)
460 PRK05875 short chain dehydroge 95.9 0.027 5.8E-07 56.1 8.3 76 243-319 4-96 (276)
461 PRK06124 gluconate 5-dehydroge 95.9 0.018 3.8E-07 56.7 6.9 47 243-290 8-55 (256)
462 cd05297 GH4_alpha_glucosidase_ 95.9 0.021 4.6E-07 61.4 8.0 73 248-320 2-85 (423)
463 PRK07024 short chain dehydroge 95.9 0.017 3.6E-07 57.1 6.7 74 246-320 2-89 (257)
464 PRK05854 short chain dehydroge 95.9 0.041 8.8E-07 56.5 9.7 77 243-320 11-104 (313)
465 PRK07453 protochlorophyllide o 95.9 0.023 4.9E-07 58.4 7.7 76 243-319 3-93 (322)
466 PRK04207 glyceraldehyde-3-phos 95.9 0.026 5.6E-07 59.0 8.2 76 247-322 2-91 (341)
467 KOG2380 Prephenate dehydrogena 95.9 0.026 5.6E-07 58.0 7.7 70 245-321 51-120 (480)
468 cd01489 Uba2_SUMO Ubiquitin ac 95.9 0.021 4.6E-07 58.9 7.4 74 248-321 1-102 (312)
469 PRK06125 short chain dehydroge 95.9 0.054 1.2E-06 53.4 10.1 77 243-320 4-92 (259)
470 PRK08945 putative oxoacyl-(acy 95.9 0.049 1.1E-06 53.3 9.7 47 243-290 9-56 (247)
471 PF05368 NmrA: NmrA-like famil 95.9 0.041 8.8E-07 53.6 9.1 70 249-321 1-76 (233)
472 PRK08589 short chain dehydroge 95.9 0.04 8.6E-07 55.1 9.2 76 243-320 3-93 (272)
473 PRK05565 fabG 3-ketoacyl-(acyl 95.9 0.024 5.1E-07 55.0 7.4 76 244-320 3-94 (247)
474 cd08272 MDR6 Medium chain dehy 95.9 0.061 1.3E-06 54.0 10.6 156 152-320 59-222 (326)
475 PRK06197 short chain dehydroge 95.9 0.021 4.6E-07 58.1 7.2 77 243-320 13-106 (306)
476 PRK07424 bifunctional sterol d 95.9 0.031 6.7E-07 59.8 8.7 77 243-320 175-256 (406)
477 PTZ00345 glycerol-3-phosphate 95.9 0.025 5.3E-07 59.7 7.8 77 245-321 10-105 (365)
478 PRK12769 putative oxidoreducta 95.9 0.025 5.4E-07 64.2 8.4 76 245-322 326-425 (654)
479 PRK12809 putative oxidoreducta 95.8 0.025 5.4E-07 64.1 8.3 76 245-322 309-408 (639)
480 TIGR03376 glycerol3P_DH glycer 95.8 0.023 5.1E-07 59.3 7.5 74 248-321 1-94 (342)
481 PRK09072 short chain dehydroge 95.8 0.021 4.6E-07 56.5 6.9 76 244-320 3-91 (263)
482 PRK06841 short chain dehydroge 95.8 0.059 1.3E-06 52.8 9.9 76 243-320 12-100 (255)
483 PRK07454 short chain dehydroge 95.8 0.026 5.6E-07 55.0 7.3 75 245-320 5-94 (241)
484 COG1250 FadB 3-hydroxyacyl-CoA 95.8 0.025 5.3E-07 58.1 7.2 36 246-282 3-38 (307)
485 PF01118 Semialdhyde_dh: Semia 95.8 0.012 2.5E-07 52.0 4.3 92 248-350 1-98 (121)
486 PRK05993 short chain dehydroge 95.8 0.018 3.9E-07 57.8 6.2 74 245-320 3-87 (277)
487 TIGR03206 benzo_BadH 2-hydroxy 95.8 0.026 5.6E-07 55.0 7.1 74 245-319 2-90 (250)
488 PRK06198 short chain dehydroge 95.7 0.029 6.2E-07 55.2 7.4 78 243-320 3-95 (260)
489 PRK00048 dihydrodipicolinate r 95.7 0.017 3.7E-07 57.9 5.8 67 247-319 2-70 (257)
490 PRK08263 short chain dehydroge 95.7 0.03 6.5E-07 55.9 7.5 75 245-320 2-88 (275)
491 PRK07677 short chain dehydroge 95.7 0.02 4.3E-07 56.3 6.1 73 246-319 1-88 (252)
492 PRK12367 short chain dehydroge 95.7 0.034 7.3E-07 55.2 7.7 76 243-319 11-89 (245)
493 PRK08324 short chain dehydroge 95.7 0.03 6.5E-07 63.9 8.3 77 243-320 419-509 (681)
494 PRK08643 acetoin reductase; Va 95.7 0.054 1.2E-06 53.2 9.1 74 246-320 2-90 (256)
495 PRK06505 enoyl-(acyl carrier p 95.7 0.057 1.2E-06 54.2 9.4 78 242-320 3-96 (271)
496 PRK13301 putative L-aspartate 95.7 0.029 6.3E-07 56.3 7.1 67 247-320 3-73 (267)
497 cd08271 MDR5 Medium chain dehy 95.7 0.054 1.2E-06 54.6 9.3 155 152-321 58-221 (325)
498 COG4091 Predicted homoserine d 95.7 0.024 5.1E-07 58.5 6.5 78 245-322 16-114 (438)
499 PRK06935 2-deoxy-D-gluconate 3 95.7 0.033 7.1E-07 55.0 7.5 75 243-320 12-102 (258)
500 PRK08628 short chain dehydroge 95.7 0.029 6.3E-07 55.2 7.1 76 243-320 4-94 (258)
No 1
>PLN00203 glutamyl-tRNA reductase
Probab=100.00 E-value=8.3e-102 Score=833.87 Aligned_cols=457 Identities=85% Similarity=1.244 Sum_probs=422.4
Q ss_pred CCchHHHHHhhhcCCcccccCcceEEEEEeecCCCCHHHHhhhcCCCCChHHHHHHHhccCCCcceEEeeecCeeEEEEE
Q 010322 41 PSSASALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVV 120 (513)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~i~~igi~hk~apv~~RE~~a~~~~~~~~~l~~l~~~~~i~e~viLsTCNR~EiY~~ 120 (513)
.++.+||+|||++++||||+|+|+|+++|+||||||+++||||+|++++++.++.+|+..+++.|++|||||||||||++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~i~~ig~shktapveiREkla~~~~~~~~~l~~l~~~~~i~e~viLSTCNR~EiY~~ 140 (519)
T PLN00203 61 AASASALEQLKNSAADRYTKEKSSIVVIGLSIHTAPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCNRMEIYVV 140 (519)
T ss_pred cchHHHHHHHHHhhhhhHHHhcCeEEEEEEeCCcCCHHHHHHhcCCHHHHHHHHHHHHhcCCcceEEEEeccCeEEEEEE
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccHHHHHHHHHHhcCCChhhhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchh
Q 010322 121 ALSQHRGVKEVTEWMSKTSGIPVAELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNI 200 (513)
Q Consensus 121 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L 200 (513)
+++.+.+.+.+.+||++++|++.+++.+++|.+.|.||+.|||+|+|||||||+||+||+||||+||..|++.|++|+.|
T Consensus 141 ~~~~~~~~~~v~~~l~~~~~~~~~~l~~~~~~~~g~~Av~HLfrVasGLDSmVlGE~QIlgQVK~A~~~A~~~g~~g~~L 220 (519)
T PLN00203 141 ALSWHRGVKEVTEWMSKTSGIPVSELRQHLFLLYDKDATQHLFEVSGGLDSLVLGEGQILAQVKQVVKVGQGVDGFGRNL 220 (519)
T ss_pred ecCcchhHHHHHHHHHHhcCCCHHHHhhhheeecCHHHHHHHHHHHhhhhhhhhCChHHHHHHHHHHHHHHHcCCccHHH
Confidence 87666677889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhCccccccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH
Q 010322 201 SGLFKHAISVGKRVRTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE 280 (513)
Q Consensus 201 ~~lf~~ai~v~k~Vr~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~ 280 (513)
+++|+.|++++|+||++|+|+.+++|++++||+++++.|+.+++.+++|+|||+|.||++++++|...|+.+|+++||+.
T Consensus 221 ~~LF~~Ai~~~KrVRteT~I~~~~vSv~s~Av~la~~~~~~~~l~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~ 300 (519)
T PLN00203 221 SGLFKHAITAGKRVRTETNIASGAVSVSSAAVELALMKLPESSHASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSE 300 (519)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhcCCCCCCCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 99999999999999999999999999999999999998852248899999999999999999999999998899999999
Q ss_pred HHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCCccccc
Q 010322 281 ERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVAD 360 (513)
Q Consensus 281 ~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~ 360 (513)
++++.++..+++..+.+.+++++.+.+.++|+||+||++++|+++.++++.+++.+.+.++++++||+++||||+|.+.+
T Consensus 301 era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPRdIdp~v~~ 380 (519)
T PLN00203 301 ERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSETPLFLKEHVEALPPASDTVGGKRLFVDISVPRNVGACVSE 380 (519)
T ss_pred HHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCCCCcccccc
Confidence 99999999886433345567777788899999999999999999999998764322222467899999999999999999
Q ss_pred ccCeEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010322 361 VETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDI 440 (513)
Q Consensus 361 l~gv~ly~iDdl~~v~~~~~~~R~~~~~~ae~iI~e~~~~f~~w~~~~~~~p~I~~lr~~~e~i~~~el~~~~~kl~~~~ 440 (513)
++|+++||+|||+.+++.|.+.|..++..|+.||++++.+|..|++.+.+.|+|++||+++++|++.||+|+++||++++
T Consensus 381 l~~v~lydiDdL~~i~~~n~~~R~~~~~~Ae~II~ee~~~F~~w~~~~~~~p~I~~lr~~~~~i~~~Eler~~~kl~~~~ 460 (519)
T PLN00203 381 LESARVYNVDDLKEVVAANKEDRLRKAMEAQTIIREESKNFEAWRDSLETVPTIKKLRSYAERIRAAELEKCLSKMGDDL 460 (519)
T ss_pred CCCCeEEEeccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997668
Q ss_pred ChHHHHHHHHHHHHHHHHHhhhHHHHHhhcCCCCCchhhhHHHHHHHHHHhCCCCCc
Q 010322 441 SKKTRRAVDDLSRGIMNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDT 497 (513)
Q Consensus 441 ~~~~~~~i~~~~~~~~~k~lh~P~~~lk~~~~~~~~~~~~~~~~~~~~~lf~l~~~~ 497 (513)
++++++.|++++++++|||||.|+.+||+.+.++...++.+.+++++++||+|+.++
T Consensus 461 ~~~~~~~ie~~~~~ivnkllh~P~~~Lr~~a~~~~~~~~~~~~~~~l~~lF~l~~~~ 517 (519)
T PLN00203 461 TKKQRKAVEDLSRGIVNKLLHGPMQHLRCDGSDSRTVSETLENMHALNRMFDLETEI 517 (519)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHhCCCccc
Confidence 999999999999999999999999999985532222234467999999999998774
No 2
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=100.00 E-value=1.3e-92 Score=746.44 Aligned_cols=413 Identities=26% Similarity=0.433 Sum_probs=385.8
Q ss_pred ceEEEEEeecCCCCHHHHhhhcCCCCChHHHHHHHhccCCCcceEEeeecCeeEEEEEeccccccHHHHHHHHHHhcCCC
Q 010322 63 SSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIP 142 (513)
Q Consensus 63 ~~i~~igi~hk~apv~~RE~~a~~~~~~~~~l~~l~~~~~i~e~viLsTCNR~EiY~~~~~~~~~~~~~~~~l~~~~~~~ 142 (513)
|+|+++|+||||||+++||||+|+++++..++..|+..+++.|++|||||||||||+++++. .....+..|++.+.+.+
T Consensus 1 M~l~~vg~~hktapi~irEk~a~~~~~~~~~l~~l~~~~~i~e~viLsTCNR~EiY~~~~~~-~~~~~~~~~l~~~~~~~ 79 (414)
T PRK13940 1 MALISLAIDYKKSPIEVRSEFALSGLDVSMLYRSILAIDNVVHAVILSTCNRTEVYLEISDL-RVVDDILVWWQGYVRNP 79 (414)
T ss_pred CeEEEEEEeCccCCHHHHHHhcCCHHHHHHHHHHHhcCCCCceEEEEecCCeEEEEEEeCCc-chHHHHHHHHHHhcCCC
Confidence 78999999999999999999999999999999999999999999999999999999987543 35678889999999999
Q ss_pred hhhhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccC
Q 010322 143 VAELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAA 222 (513)
Q Consensus 143 ~~~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~ 222 (513)
.+++.+++|.+.|.||+.|||+|+|||||||+||+||+||||+||..|++.|++|+.|+.+|+.|++++|+||++|+|+.
T Consensus 80 ~~~~~~~~~~~~g~~Av~HLfrVasGLdSmVlGE~QIlgQVK~A~~~A~~~g~~g~~L~~lf~~A~~~aKrVrteT~I~~ 159 (414)
T PRK13940 80 NYKIKDYFKLRQGTEVIMHLMKLACGLESMVLGEPQILGQVKDSYTLSKKNHAIGKELDRVFQKVFATAKRVRSETRIGH 159 (414)
T ss_pred HHHHHhHHHhhccHHHHHHHHHHHhccchhhcCcHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccch
Q 010322 223 GAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSE 302 (513)
Q Consensus 223 ~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~ 302 (513)
+++|++++||+++++.+ +++.+++|+|||+|+||++++.+|...|+.+|+|+||+.++++.++++++. ..+.++++
T Consensus 160 ~~vSv~~~Av~la~~~~--~~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~--~~~~~~~~ 235 (414)
T PRK13940 160 CPVSVAFSAITLAKRQL--DNISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN--ASAHYLSE 235 (414)
T ss_pred CCcCHHHHHHHHHHHHh--cCccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC--CeEecHHH
Confidence 99999999999999988 478999999999999999999999999999999999999999999999863 24567888
Q ss_pred HHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccccCeEEEccCCHHHHHHHHHHH
Q 010322 303 MLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKED 382 (513)
Q Consensus 303 ~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~gv~ly~iDdl~~v~~~~~~~ 382 (513)
+.+.+..+|+||+||++|+|+|+.+.+. ++|.++||+++||||||.+.+++|+++||+||++.+++.|.+.
T Consensus 236 l~~~l~~aDiVI~aT~a~~~vi~~~~~~---------~~~~~~iDLavPRdidp~v~~l~~v~l~~iDdl~~i~~~n~~~ 306 (414)
T PRK13940 236 LPQLIKKADIIIAAVNVLEYIVTCKYVG---------DKPRVFIDISIPQALDPKLGELEQNVYYCVDDINAVIEDNKDK 306 (414)
T ss_pred HHHHhccCCEEEECcCCCCeeECHHHhC---------CCCeEEEEeCCCCCCCccccCcCCeEEEeHHHHHHHHHHHHHH
Confidence 8888999999999999999999876642 3568999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhh
Q 010322 383 RLRKAMEAQAIITEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIMNKLLHG 462 (513)
Q Consensus 383 R~~~~~~ae~iI~e~~~~f~~w~~~~~~~p~I~~lr~~~e~i~~~el~~~~~kl~~~~~~~~~~~i~~~~~~~~~k~lh~ 462 (513)
|..++..|+.||++++..|..|+..+.+.|+|++||++++++++.|++|++++|+ .++++++.+++++++++|||||.
T Consensus 307 R~~~~~~a~~iI~e~~~~f~~w~~~~~~~p~I~~lr~~~~~i~~~el~r~~~~l~--~~~~~~~~i~~~~~~~~~kllh~ 384 (414)
T PRK13940 307 RKYESSKAQKIIVKSLEEYLEKEKAIISNSAIKELFQKADGLVDLSLEKSLAKIR--NGKDAEEIIKRFAYEIKKKVLHY 384 (414)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhhcC--CCccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999995 37889999999999999999999
Q ss_pred HHHHHhhcCCCCCchhhhHHHHHHHHHHhCCCCC
Q 010322 463 PMQHLRCDGSDSRTLDETLENMHALNRMFGLETD 496 (513)
Q Consensus 463 P~~~lk~~~~~~~~~~~~~~~~~~~~~lf~l~~~ 496 (513)
|+..||+.+.++. .+++++++++|+++.+
T Consensus 385 P~~~lk~~~~~~~-----~~~~~~~~~lf~l~~~ 413 (414)
T PRK13940 385 PVVGMKEASKQGR-----SDCLVCMKRMFGLNVE 413 (414)
T ss_pred HHHHHHHhhccCh-----HHHHHHHHHHhCCCCC
Confidence 9999997543221 3688999999999765
No 3
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=100.00 E-value=2e-92 Score=733.30 Aligned_cols=413 Identities=42% Similarity=0.660 Sum_probs=390.2
Q ss_pred ceEEEEEeecCCCCHHHHhhhcCCCCChHHHHHHHhccCCCcceEEeeecCeeEEEEEeccccccHHHHHHHHHHhcCCC
Q 010322 63 SSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIP 142 (513)
Q Consensus 63 ~~i~~igi~hk~apv~~RE~~a~~~~~~~~~l~~l~~~~~i~e~viLsTCNR~EiY~~~~~~~~~~~~~~~~l~~~~~~~ 142 (513)
|+|.+||+||||||+++|||++|++++....+..|...+.+.|++|||||||+|||+++ +.+. .+.+|++++++++
T Consensus 1 m~i~~igi~hkta~ve~rEk~~~~~~~~~~~l~~l~~~~~~~e~viLsTCNR~EiY~~~---~~~~-~~~~~l~~~~~~~ 76 (414)
T COG0373 1 MNILVIGINHKTAPVEEREKLSFSEEELLEALDQLLHQPSIEEAVILSTCNRVEIYAVV---HTGS-ELIRFLAELHGLS 76 (414)
T ss_pred CeEEEEEeecccCCHHHHHHhcCCcHHHHHHHHHHhhcccccceEEEecCCeEEEEEEe---cccc-chhHHHHHhcCCC
Confidence 78999999999999999999999999999998888999999999999999999999987 3455 7889999999999
Q ss_pred hhhhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccC
Q 010322 143 VAELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAA 222 (513)
Q Consensus 143 ~~~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~ 222 (513)
.+++.+++|++.|.+|+.|||+|+|||||||+||+||+||||+||..|++.|++|+.|+.+|++|+++||+||++|+|+.
T Consensus 77 ~~~l~~~~~v~~~~~Av~HLfrVAsGLDSmVlGE~QILGQVK~Ay~~a~~~g~~g~~L~~lFqkAi~~gKrvRseT~I~~ 156 (414)
T COG0373 77 IEDLGKYLYVLRGEEAVRHLFRVASGLDSLVLGETQILGQVKDAYAKAQENGTLGKVLNRLFQKAISVGKRVRSETGIGK 156 (414)
T ss_pred hhhhccCeEEEcCHHHHHHHHHHhccchhhhcCcHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhhcccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccch
Q 010322 223 GAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSE 302 (513)
Q Consensus 223 ~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~ 302 (513)
+++|++++||++|+..| +++.+++|+|||||.||.+++++|...|+.+|+|+|||.+|+.+||+++++ .+.++++
T Consensus 157 ~~VSi~saAv~lA~~~~--~~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~---~~~~l~e 231 (414)
T COG0373 157 GAVSISSAAVELAKRIF--GSLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGA---EAVALEE 231 (414)
T ss_pred CccchHHHHHHHHHHHh--cccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCC---eeecHHH
Confidence 99999999999999998 479999999999999999999999999999999999999999999999984 5778899
Q ss_pred HHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccccCeEEEccCCHHHHHHHHHHH
Q 010322 303 MLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKED 382 (513)
Q Consensus 303 ~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~gv~ly~iDdl~~v~~~~~~~ 382 (513)
+.+.+..+||||+||++|+|+++.+.++.+.+.+ ..+++||+++|||++|.+..++|+++|++||++.+++.|.+.
T Consensus 232 l~~~l~~~DvVissTsa~~~ii~~~~ve~a~~~r----~~~livDiavPRdie~~v~~l~~v~l~~iDDL~~iv~~n~~~ 307 (414)
T COG0373 232 LLEALAEADVVISSTSAPHPIITREMVERALKIR----KRLLIVDIAVPRDVEPEVGELPNVFLYTIDDLEEIVEENLEA 307 (414)
T ss_pred HHHhhhhCCEEEEecCCCccccCHHHHHHHHhcc----cCeEEEEecCCCCCCccccCcCCeEEEehhhHHHHHHHhHHH
Confidence 9999999999999999999999999998765432 227999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhh
Q 010322 383 RLRKAMEAQAIITEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIMNKLLHG 462 (513)
Q Consensus 383 R~~~~~~ae~iI~e~~~~f~~w~~~~~~~p~I~~lr~~~e~i~~~el~~~~~kl~~~~~~~~~~~i~~~~~~~~~k~lh~ 462 (513)
|.+.+..++.||++++..|..|++.+.+.|+|+++|++++.++++|++|++++|+. ++.+++++++++++++||+||.
T Consensus 308 R~~~~~~ae~iIeee~~~~~~~l~~~~~~~~i~~lr~~a~~v~~~ele~a~~~l~~--~~~~~evl~~~~~si~nk~L~~ 385 (414)
T COG0373 308 RKEEAAKAEAIIEEELAEFMEWLKKLEVVPTIRALREQAEDVREEELEKALKKLPN--GEDEEEVLEKLARSLVNKLLHA 385 (414)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhccC--CCchHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999985 5677899999999999999999
Q ss_pred HHHHHhhcCCCCCchhhhHHHHHHHHHHhCCCC
Q 010322 463 PMQHLRCDGSDSRTLDETLENMHALNRMFGLET 495 (513)
Q Consensus 463 P~~~lk~~~~~~~~~~~~~~~~~~~~~lf~l~~ 495 (513)
|+..||+....+ ..+++++++++|+++.
T Consensus 386 pt~~lk~~a~~~-----~~~~~~~~~~lf~~~~ 413 (414)
T COG0373 386 PTVRLKEAAKEG-----SEELLRALRELFNLDE 413 (414)
T ss_pred HHHHHHHHHhcc-----cHHHHHHHHHHhcccC
Confidence 999999865322 2578999999999975
No 4
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=100.00 E-value=6e-85 Score=692.40 Aligned_cols=417 Identities=42% Similarity=0.629 Sum_probs=384.6
Q ss_pred EEEEEeecCCCCHHHHhhhcCCCCChHHHHHHHhccCCCcceEEeeecCeeEEEEEeccccccHHHHHHHHHHhcCCChh
Q 010322 65 IVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVA 144 (513)
Q Consensus 65 i~~igi~hk~apv~~RE~~a~~~~~~~~~l~~l~~~~~i~e~viLsTCNR~EiY~~~~~~~~~~~~~~~~l~~~~~~~~~ 144 (513)
|+++|+||||||+++||||+|+++++..++..|.+.+++.|++|||||||||||+++++.+.....+.+||++++|++.+
T Consensus 1 ~~~ig~~hk~a~i~~re~~~~~~~~~~~~l~~l~~~~~~~e~viLsTCNR~EiY~~~~~~~~~~~~~~~~l~~~~~~~~~ 80 (417)
T TIGR01035 1 ILVLGVSHKSAPVEVREKLSIDEIKLKKALDTLKAEPSIEEAMVLSTCNRVEIYAVVDNLHEGKSALLQILAENKNMSNE 80 (417)
T ss_pred CEEEEEeCCcCCHHHHHHhcCCHHHHHHHHHHHHhcCCCceEEEEecCCeEEEEEEeCCcchhHHHHHHHHHHHcCCCHH
Confidence 57899999999999999999999999999999999999999999999999999998766555667889999999999999
Q ss_pred hhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccCCC
Q 010322 145 ELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAAGA 224 (513)
Q Consensus 145 ~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~~~ 224 (513)
++.+++|.+.|.||++|||+|++||||||+||+||+||||.||+.|++.+++|+.|+++|++|++++|+||++|+|+.++
T Consensus 81 ~~~~~~~~~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k~vr~~t~i~~~~ 160 (417)
T TIGR01035 81 DLEKYLYILTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGKRVRTETDISAGA 160 (417)
T ss_pred HHHhHHHhcCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHH
Q 010322 225 VSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEML 304 (513)
Q Consensus 225 ~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~ 304 (513)
+|++++||+++.+.+ +++.+++|+|+|+|+||..++++|...|+.+|+++||+.+++..+++.++. ...+++++.
T Consensus 161 vSv~~~Av~la~~~~--~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~---~~i~~~~l~ 235 (417)
T TIGR01035 161 VSISSAAVELAERIF--GSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG---EAVKFEDLE 235 (417)
T ss_pred cCHHHHHHHHHHHHh--CCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC---eEeeHHHHH
Confidence 999999999998877 468999999999999999999999999988899999999999889998874 233556777
Q ss_pred hhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccccCeEEEccCCHHHHHHHHHHHHH
Q 010322 305 SCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRL 384 (513)
Q Consensus 305 ~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~gv~ly~iDdl~~v~~~~~~~R~ 384 (513)
+.+.++|+||+||++++|+++.++++...+. +.++.+++|+++|||++|.+.+++|+++|++||+.+++++|.+.|.
T Consensus 236 ~~l~~aDvVi~aT~s~~~ii~~e~l~~~~~~---~~~~~~viDla~Prdid~~v~~l~~v~l~~vDdl~~~~~~n~~~r~ 312 (417)
T TIGR01035 236 EYLAEADIVISSTGAPHPIVSKEDVERALRE---RTRPLFIIDIAVPRDVDPAVARLEGVFLYDVDDLQPVVEENLAERR 312 (417)
T ss_pred HHHhhCCEEEECCCCCCceEcHHHHHHHHhc---CCCCeEEEEeCCCCCCChhhcCcCCeEEEEHHHHHHHHHHhHHHHH
Confidence 7888999999999999999998888764321 1256799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHH
Q 010322 385 RKAMEAQAIITEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIMNKLLHGPM 464 (513)
Q Consensus 385 ~~~~~ae~iI~e~~~~f~~w~~~~~~~p~I~~lr~~~e~i~~~el~~~~~kl~~~~~~~~~~~i~~~~~~~~~k~lh~P~ 464 (513)
.++..|+.||++++..|..|++.+.+.|+|++||++++++++.|++|++++|+ ++++++++.+++++++++|||||.|+
T Consensus 313 ~~~~~a~~ii~~~~~~f~~w~~~~~~~p~I~~lr~~~~~i~~~el~~~~~~l~-~~~~~~~~~~~~~~~~~~~k~lh~p~ 391 (417)
T TIGR01035 313 EEAEKAEEIVEEETAEFKQWLRSLEVEPTIKALRSLAEIVREKELEKALKKLP-GLSKDVEEVLEDLARKLINKLLHAPT 391 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999986 47899999999999999999999999
Q ss_pred HHHhhcCCCCCchhhhHHHHHHHHHHhCCC
Q 010322 465 QHLRCDGSDSRTLDETLENMHALNRMFGLE 494 (513)
Q Consensus 465 ~~lk~~~~~~~~~~~~~~~~~~~~~lf~l~ 494 (513)
..||+....+. ...++++++++|+++
T Consensus 392 ~~lk~~~~~~~----~~~~~~~~~~lf~l~ 417 (417)
T TIGR01035 392 VRLKQLADKEE----SEVCLEALKNLFGLE 417 (417)
T ss_pred HHHHHHhcCCC----hHHHHHHHHHHhCcC
Confidence 99997443221 246899999999975
No 5
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=100.00 E-value=2.7e-84 Score=689.21 Aligned_cols=420 Identities=41% Similarity=0.636 Sum_probs=386.6
Q ss_pred ceEEEEEeecCCCCHHHHhhhcCCCCChHHHHHHHhccCCCcceEEeeecCeeEEEEEeccccccHHHHHHHHHHhcCCC
Q 010322 63 SSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIP 142 (513)
Q Consensus 63 ~~i~~igi~hk~apv~~RE~~a~~~~~~~~~l~~l~~~~~i~e~viLsTCNR~EiY~~~~~~~~~~~~~~~~l~~~~~~~ 142 (513)
|+|.++|+||||||+++||+|+|+++++..++..|.+.+++.|++|||||||||||+++++.+...+.+.+||+.++|++
T Consensus 1 m~~~~ig~~hk~a~i~~re~~~~~~~~~~~~~~~l~~~~~~~e~viLsTCNR~EiY~~~~~~~~~~~~~~~~l~~~~~~~ 80 (423)
T PRK00045 1 MSLLAVGLNHKTAPVELREKLAFSEDELEEALESLLASPSVLEAVILSTCNRTEIYAVVDQFHAGREAIIRWLAEYHGLD 80 (423)
T ss_pred CeEEEEEEeCCcCCHHHHHHhcCCHHHHHHHHHHHhcCCCCceEEEEecCCeEEEEEEeCCccchHHHHHHHHHHHhCCC
Confidence 78999999999999999999999999999999999999999999999999999999987654555667889999999999
Q ss_pred hhhhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccC
Q 010322 143 VAELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAA 222 (513)
Q Consensus 143 ~~~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~ 222 (513)
.+++.+++|.+.||||++|||+|++||||||+||+||+||||+||+.|++.|++|+.++++|+++++++|+++++|+++.
T Consensus 81 ~~~~~~~~~~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~~~~k~v~~~t~i~~ 160 (423)
T PRK00045 81 LEELRPYLYVHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKAFSVAKRVRTETGIGA 160 (423)
T ss_pred HHHHhhhHhhcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhHhhhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccch
Q 010322 223 GAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSE 302 (513)
Q Consensus 223 ~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~ 302 (513)
+|+|++++|++++...+ +++.+++|+|+|+|+||++++++|...|+.+|+++||+++++..++..++. .+.++++
T Consensus 161 ~~~Sv~~~Av~~a~~~~--~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~---~~~~~~~ 235 (423)
T PRK00045 161 GAVSVASAAVELAKQIF--GDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGG---EAIPLDE 235 (423)
T ss_pred CCcCHHHHHHHHHHHhh--CCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC---cEeeHHH
Confidence 99999999999988766 368899999999999999999999999998899999999999899999874 2445567
Q ss_pred HHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccccCeEEEccCCHHHHHHHHHHH
Q 010322 303 MLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKED 382 (513)
Q Consensus 303 ~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~gv~ly~iDdl~~v~~~~~~~ 382 (513)
..+.+.++|+||+||++++|+++.++++.+...+ .+++.+++|+++|||++|.+.+++|+++|++||++++++.|.+.
T Consensus 236 ~~~~l~~aDvVI~aT~s~~~~i~~~~l~~~~~~~--~~~~~vviDla~Prdid~~v~~l~~v~l~~vDdl~~~~~~n~~~ 313 (423)
T PRK00045 236 LPEALAEADIVISSTGAPHPIIGKGMVERALKAR--RHRPLLLVDLAVPRDIEPEVGELPGVYLYDVDDLQEIVEENLAQ 313 (423)
T ss_pred HHHHhccCCEEEECCCCCCcEEcHHHHHHHHhhc--cCCCeEEEEeCCCCCCcccccccCCeEEEEHHHHHHHHHhhHHH
Confidence 7777889999999999999999988887643211 24679999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhh
Q 010322 383 RLRKAMEAQAIITEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIMNKLLHG 462 (513)
Q Consensus 383 R~~~~~~ae~iI~e~~~~f~~w~~~~~~~p~I~~lr~~~e~i~~~el~~~~~kl~~~~~~~~~~~i~~~~~~~~~k~lh~ 462 (513)
|..++..|+.||+++++.|..|++.+.+.|+|++||++++++++.|++|++++|+. ++++++.+++++++++|||||.
T Consensus 314 r~~~~~~a~~ii~~~~~~f~~~~~~~~~~p~I~~lr~~~~~i~~~el~~~~~~l~~--~~~~~~~~~~~~~~~~~k~lh~ 391 (423)
T PRK00045 314 RQEAAEKAEAIVEEEVAEFMEWLRSLEVVPTIRALREQAEEIREEELERALKKLGP--GEDEEEVLEKLARSLVNKLLHA 391 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhccC--CccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999963 5688999999999999999999
Q ss_pred HHHHHhhcCCCCCchhhhHHHHHHHHHHhCCCCC
Q 010322 463 PMQHLRCDGSDSRTLDETLENMHALNRMFGLETD 496 (513)
Q Consensus 463 P~~~lk~~~~~~~~~~~~~~~~~~~~~lf~l~~~ 496 (513)
|+.+||+...+. ..+++++++++|+++.+
T Consensus 392 p~~~lr~~~~~~-----~~~~~~~~~~~f~~~~~ 420 (423)
T PRK00045 392 PTVRLKEAAEEG-----DDEYLEALRELFGLDPE 420 (423)
T ss_pred HHHHHHhhcccC-----hHHHHHHHHHHhCCCCc
Confidence 999999843222 24689999999998765
No 6
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=100.00 E-value=9.4e-68 Score=538.94 Aligned_cols=310 Identities=22% Similarity=0.269 Sum_probs=261.4
Q ss_pred ceEEEEEeecCCCCHHHHhhhcCCCCChHHH-HHHHhccCCCcceEEeeecCeeEEEEEeccccccHHHHHHHHHHhcCC
Q 010322 63 SSIVVIGLSVHTAPVEMREKLAIPEAEWPRA-IGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGI 141 (513)
Q Consensus 63 ~~i~~igi~hk~apv~~RE~~a~~~~~~~~~-l~~l~~~~~i~e~viLsTCNR~EiY~~~~~~~~~~~~~~~~l~~~~~~ 141 (513)
|+|.++|+||||||+++||+|+|...+.... +..+...+++.|++|||||||||||+++++.+...+.+.+|+++. +.
T Consensus 1 M~l~viGinhktapv~iREkla~~~~~~~~~~~~~~~~~~~~~e~viLSTCNRtEiY~~~~~~~~~~~~~~~~l~~~-~~ 79 (338)
T PRK00676 1 MVLGVVGISYREAALKEREQVIQILQQFEGSLFFRQRFFGEEGDFVLLLTCHRAELYYYSVSPAELQSSLLSEITSL-GV 79 (338)
T ss_pred CEEEEEEEeCCcCCHHHHHHHhcCCchhhHHHHhhhccccCcccEEEEecCCcEEEEEEeCCchhHHHHHHHHHHhc-CC
Confidence 7899999999999999999999976554322 111222357889999999999999998754333445677888763 22
Q ss_pred ChhhhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCcccccccccc
Q 010322 142 PVAELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIA 221 (513)
Q Consensus 142 ~~~~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~ 221 (513)
..|.+.|.||+.|||+|+|||||||+||+||+||||+||..|++.|++|+.|+.+|+.|++++|+||++|+|+
T Consensus 80 -------~~y~~~g~~Av~HLfrVasGLDSmVlGE~QIlGQVK~Ay~~A~~~g~~g~~L~~lf~~A~~~aKrVRteT~I~ 152 (338)
T PRK00676 80 -------RPYFYRGLDCFTHLFCVTSGMDSLILGETEIQGQVKRAYLKAARERKLPFALHFLFQKALKEGKVFRSKGGAP 152 (338)
T ss_pred -------cceeecCHHHHHHHHHHhcccchhhcCcHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 2477999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc
Q 010322 222 AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS 301 (513)
Q Consensus 222 ~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~ 301 (513)
.+++|++++|+.+++. + +++.+++|+|||+|+||++++++|...|+.+|+|+|||..+. .++.. +.
T Consensus 153 ~~~vSv~s~av~~~~~-~--~~l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~~-----~~~~~-----~~- 218 (338)
T PRK00676 153 YAEVTIESVVQQELRR-R--QKSKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLTL-----PYRTV-----VR- 218 (338)
T ss_pred CCCcCHHHHHHHHHHH-h--CCccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCcccc-----chhhh-----hh-
Confidence 9999999999998855 5 579999999999999999999999999999999999997531 12110 00
Q ss_pred hHHhhcCCCcEEEEc---CCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccccCeEEEccCCHHHHHHH
Q 010322 302 EMLSCAADADVVFTS---TASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAA 378 (513)
Q Consensus 302 ~~~~~l~~aDVVI~A---T~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~gv~ly~iDdl~~v~~~ 378 (513)
+.......+||||+| |++|+|+++.+.++.. .++++||+|+||||+| +..++++++||+||++.+++.
T Consensus 219 ~~~~~~~~~DvVIs~t~~Tas~~p~i~~~~~~~~--------~~r~~iDLAvPRdId~-v~~~~~v~Ly~iDdL~~i~~~ 289 (338)
T PRK00676 219 EELSFQDPYDVIFFGSSESAYAFPHLSWESLADI--------PDRIVFDFNVPRTFPW-SETPFPHRYLDMDFISEWVQK 289 (338)
T ss_pred hhhhcccCCCEEEEcCCcCCCCCceeeHHHHhhc--------cCcEEEEecCCCCCcc-ccccCCcEEEEhHHHHHHHHH
Confidence 111334689999997 8899999998877542 1259999999999998 888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 010322 379 NKEDRLRKAMEAQAIITEESKQFAA 403 (513)
Q Consensus 379 ~~~~R~~~~~~ae~iI~e~~~~f~~ 403 (513)
|...|.+++.+++.||++.+..|..
T Consensus 290 n~~~R~~~~~~ae~iI~~~~~~~~~ 314 (338)
T PRK00676 290 HLQCRKEVNNKHKLSLREAAYKQWE 314 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998865443
No 7
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=100.00 E-value=6.3e-68 Score=542.57 Aligned_cols=309 Identities=44% Similarity=0.652 Sum_probs=279.7
Q ss_pred EEEEEeecCCCCHHHHhhhcCCCCChHHHHHHHhccCCCcceEEeeecCeeEEEEEeccccccHHHHHHHHHHhcCCChh
Q 010322 65 IVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVA 144 (513)
Q Consensus 65 i~~igi~hk~apv~~RE~~a~~~~~~~~~l~~l~~~~~i~e~viLsTCNR~EiY~~~~~~~~~~~~~~~~l~~~~~~~~~ 144 (513)
|.++|+|||++|+++||||+|+++++.+++..|++.+++.|++|||||||||||+++++.+...+.+.+|+++.+|++
T Consensus 1 l~~ig~~hk~a~i~~re~~~~~~~~~~~~l~~l~~~~~~~e~viLsTCNR~EiY~~~~~~~~~~~~~~~~l~~~~~~~-- 78 (311)
T cd05213 1 ILVIGLSHKTAPVELREKLAFSEEELKEALRRLLEKPGISEAVLLSTCNRVELYLVGDNFHKLADELEELLAELLNEP-- 78 (311)
T ss_pred CEEEEEeCCcCCHHHHHHhcCCHHHHHHHHHHHhcCCCCceEEEEecCCeEEEEEEeCCcchhHHHHHHHHHHhcCch--
Confidence 478999999999999999999999999999999999999999999999999999987655556778899999999998
Q ss_pred hhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccCCC
Q 010322 145 ELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAAGA 224 (513)
Q Consensus 145 ~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~~~ 224 (513)
++.+++|.+.|.||+.|||+|+|||||||+||+||+||||+||..|++.|++|+.|+.+|+.|++++|+|+++|+++.+|
T Consensus 79 ~~~~~~~~~~~~~a~~HLf~Va~GLdS~v~GE~qIlgQvk~A~~~a~~~g~~~~~L~~lf~~a~~~~k~vr~et~i~~~~ 158 (311)
T cd05213 79 ELREYLYVGRGQDAVRHLFRVASGLDSMVVGETQILGQVKNAYKLAKEAGTSGKLLNRLFQKAIKVGKRVRTETGISRGA 158 (311)
T ss_pred HhhhhheeecCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHH
Q 010322 225 VSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEML 304 (513)
Q Consensus 225 ~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~ 304 (513)
+|++++|++++...+ +++.+++|+|||+|+||+.++++|...|+.+|+++||+++++.+++++++. .+.+++++.
T Consensus 159 ~sv~~~Av~~a~~~~--~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~---~~~~~~~~~ 233 (311)
T cd05213 159 VSISSAAVELAEKIF--GNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG---NAVPLDELL 233 (311)
T ss_pred cCHHHHHHHHHHHHh--CCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC---eEEeHHHHH
Confidence 999999999998877 368899999999999999999999998988999999999999999999875 344556777
Q ss_pred hhcCCCcEEEEcCCCCcc-CCChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccccCeEEEccCCHHHHHHHHHHHH
Q 010322 305 SCAADADVVFTSTASEAP-LFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDR 383 (513)
Q Consensus 305 ~~l~~aDVVI~AT~s~~~-vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~gv~ly~iDdl~~v~~~~~~~R 383 (513)
+.+..+|+||+||+++++ .+....+... .+++.++||+++|||++|.+.++||+++|++|||+.++++|.+.|
T Consensus 234 ~~l~~aDvVi~at~~~~~~~~~~~~~~~~------~~~~~~viDlavPrdi~~~v~~l~~v~l~~vDdl~~~~~~n~~~r 307 (311)
T cd05213 234 ELLNEADVVISATGAPHYAKIVERAMKKR------SGKPRLIVDLAVPRDIEPEVGELEGVRLYTIDDLEEVVEENLERR 307 (311)
T ss_pred HHHhcCCEEEECCCCCchHHHHHHHHhhC------CCCCeEEEEeCCCCCCchhhccCCCcEEEEHHHhHHHHHHhHHHH
Confidence 778899999999999988 1112222211 245689999999999999999999999999999999999998877
Q ss_pred HHH
Q 010322 384 LRK 386 (513)
Q Consensus 384 ~~~ 386 (513)
.++
T Consensus 308 ~~~ 310 (311)
T cd05213 308 EKE 310 (311)
T ss_pred Hhc
Confidence 653
No 8
>PF05201 GlutR_N: Glutamyl-tRNAGlu reductase, N-terminal domain; InterPro: IPR015895 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents the N-terminal domain of glutamyl-tRNA reductase (1.2.1.70 from EC), which reduces glutamyl-tRNA to glutamate-1-semialdehyde during the first stage of tetrapyrrole biosynthesis by the C5 pathway [, ]. The enzyme requires NADPH as a cofactor.; GO: 0008883 glutamyl-tRNA reductase activity, 0050661 NADP binding, 0033014 tetrapyrrole biosynthetic process, 0055114 oxidation-reduction process; PDB: 1GPJ_A.
Probab=100.00 E-value=4.1e-44 Score=329.48 Aligned_cols=152 Identities=45% Similarity=0.717 Sum_probs=120.0
Q ss_pred EEeecCCCCHHHHhhhcCCCCChHHHHHHHhccCCCcceEEeeecCeeEEEEEeccccccHHHHHHHHHHhcCCChhhhh
Q 010322 68 IGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELC 147 (513)
Q Consensus 68 igi~hk~apv~~RE~~a~~~~~~~~~l~~l~~~~~i~e~viLsTCNR~EiY~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (513)
||+|||+||+++||+|+|+++++++++.+|++.+++.|++|||||||+|||+++++.+.....+.+||+++.+++++++.
T Consensus 1 ig~~hk~a~l~~re~~~~~~~~~~~~l~~l~~~~~i~e~viLsTCNR~Eiy~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 80 (152)
T PF05201_consen 1 IGISHKTAPLEIRERFAFSDEELPEALAELKSFPGIEEAVILSTCNRVEIYVVSDDPEAGIDDVKEFLADFSGVDPDELS 80 (152)
T ss_dssp EEEETTTS-HHHHHHHS---TTHHH---HHHHHTT-SEEEEEEETTEEEEEEES-TT-------HHHHH-------HTT-
T ss_pred CeeccccCCHHHHHHHhCCHHHHHHHHHHHhccCCCceEEEeecCCeEEEEEEeCcchhhHHHHHHHHHhhcccchhhhh
Confidence 79999999999999999999999999999999999999999999999999998876666778899999999999999999
Q ss_pred hHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCcccccccc
Q 010322 148 EHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETN 219 (513)
Q Consensus 148 ~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~ 219 (513)
+++|++.|.||+.|||+|+|||||||+||+||+||||+||..|++.|++|++|+.+|+.|++++|+||++|+
T Consensus 81 ~~~~~~~g~~a~~HLf~VasGLdS~V~GE~qIlgQvk~A~~~A~~~g~~g~~L~~lf~~Ai~~aKrvrteT~ 152 (152)
T PF05201_consen 81 EYLYVYTGDEAVRHLFRVASGLDSMVVGEDQILGQVKRAYEFAREAGTTGPILNRLFQQAIRVAKRVRTETG 152 (152)
T ss_dssp TT-EEEEHHHHHHHHHHHHTTTTSSSTT-HHHHHHHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHHHHSS
T ss_pred cceEEEcChHHHHHHHHHHhcchhhhcChHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999984
No 9
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=99.90 E-value=4.6e-24 Score=192.87 Aligned_cols=134 Identities=38% Similarity=0.617 Sum_probs=113.9
Q ss_pred HHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEE
Q 010322 234 LALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVV 313 (513)
Q Consensus 234 la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVV 313 (513)
+|++.+ +++.+++|+|||+|++|++++.+|...|+++|+++|||.+|++++++.+++..+.+.+++++.+.+..+|+|
T Consensus 2 la~~~~--~~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~Div 79 (135)
T PF01488_consen 2 LAKKKF--GDLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIV 79 (135)
T ss_dssp HHCTHH--STGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEE
T ss_pred hhHHhc--CCcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeE
Confidence 556666 489999999999999999999999999999999999999999999999965445677888888888999999
Q ss_pred EEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccccCeEEEccCCHHHH
Q 010322 314 FTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEV 375 (513)
Q Consensus 314 I~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~gv~ly~iDdl~~v 375 (513)
|+||++++++++.+.+..... ...+++|+++||||+|.+.+++|+++|++||++++
T Consensus 80 I~aT~~~~~~i~~~~~~~~~~------~~~~v~Dla~Pr~i~~~v~~~~~v~~~~~d~l~~v 135 (135)
T PF01488_consen 80 INATPSGMPIITEEMLKKASK------KLRLVIDLAVPRDIDPEVAELPGVRLYDLDDLKEV 135 (135)
T ss_dssp EE-SSTTSTSSTHHHHTTTCH------HCSEEEES-SS-SB-TTCGGSTTECCEEHHHHHH-
T ss_pred EEecCCCCcccCHHHHHHHHh------hhhceeccccCCCCChhhcccCCeEEEEhhhcccC
Confidence 999999999999988865421 11499999999999999999999999999999874
No 10
>PRK14982 acyl-ACP reductase; Provisional
Probab=99.81 E-value=6.9e-19 Score=181.03 Aligned_cols=235 Identities=22% Similarity=0.232 Sum_probs=172.0
Q ss_pred cCCceeeeeeeeccCCCCccc-CcchhhchHHHHHHHhHhcCcc----cchhhHHHHHHHhhC--ccccc---c----cc
Q 010322 154 YNKDATQHLFEVSAGLDSLVL-GEGQILAQVKQVVKVGQGVVGF----GRNISGLFKHAISVG--KRVRT---E----TN 219 (513)
Q Consensus 154 ~G~eav~hlf~V~sGldS~vv-GE~qIlgQvk~A~~~a~~~~~~----g~~L~~lf~~ai~v~--k~Vr~---e----t~ 219 (513)
.|.++-+.++.+.---+-|.- ........+.+|.+.|++.|.- |.+.+-.+.. +.+. .++|. + |.
T Consensus 51 ~g~~~eg~~i~~~~~pe~l~~~~~~~~~~~~~~a~~~a~~~G~~i~~Lg~~tsiv~~~-~~~~~~~~~r~i~ie~~~~Tt 129 (340)
T PRK14982 51 TGQTIEGKYIESCFLPEMLSNRRFKTARRKVLNAMALAQKKGINITALGGFSSIIFEN-FNLLQHKQVRNTTLEWERFTT 129 (340)
T ss_pred CCCEEEEEEEeCCCCHHHHhccChHHHHHHHHHHHHHHHHCCCeEEEcCChHHHhcCC-cccccccccccceeccccccC
Confidence 577788887766532222321 2333446677888999988763 2222222222 1221 23331 1 11
Q ss_pred ccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhCCcceee
Q 010322 220 IAAGAVSVSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVA-KGCTKMVVVNRSEERVAAICEELNGVEIIY 297 (513)
Q Consensus 220 i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~-~G~~~V~v~nRs~~ra~~la~~~g~~~~~~ 297 (513)
=...++++++.+|+++...++ .++.+++|+|+|| |.||+.++++|.. .|+.++++++|+.+++..++.+++.. .+
T Consensus 130 GNs~T~~ll~~~V~la~~~lg-~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~--~i 206 (340)
T PRK14982 130 GNTHTAYVICRQVEQNAPRLG-IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGG--KI 206 (340)
T ss_pred CchhHHHHHHHHHHHhHHHhc-cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccc--cH
Confidence 122356777788999888875 5789999999999 8999999999986 47888999999999999998887521 22
Q ss_pred cccchHHhhcCCCcEEEEcCCCCccC-CChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccccCeEEEc--------
Q 010322 298 KPLSEMLSCAADADVVFTSTASEAPL-FLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYN-------- 368 (513)
Q Consensus 298 ~~~~~~~~~l~~aDVVI~AT~s~~~v-i~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~gv~ly~-------- 368 (513)
.++.+.+.++|+||.+|++++++ ++++.+ .++.+++|+|+||||+|.+.. ||+++|+
T Consensus 207 ---~~l~~~l~~aDiVv~~ts~~~~~~I~~~~l----------~~~~~viDiAvPRDVd~~v~~-~~V~v~~gG~V~~p~ 272 (340)
T PRK14982 207 ---LSLEEALPEADIVVWVASMPKGVEIDPETL----------KKPCLMIDGGYPKNLDTKVQG-PGIHVLKGGIVEHSL 272 (340)
T ss_pred ---HhHHHHHccCCEEEECCcCCcCCcCCHHHh----------CCCeEEEEecCCCCCCcccCC-CCEEEEeCCccccCC
Confidence 24567788999999999999885 777665 245999999999999999988 9999988
Q ss_pred -cC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 010322 369 -VD-DLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLET 410 (513)
Q Consensus 369 -iD-dl~~v~~~~~~~R~~~~~~ae~iI~e~~~~f~~w~~~~~~ 410 (513)
+| |++.+++.+...|...+..||.||-. |+.|+..-..
T Consensus 273 ~vd~~l~~~v~~~~~~r~~~Ac~AEtiiL~----leg~~~~fS~ 312 (340)
T PRK14982 273 DIDWKIMEIAEMDNPQRQMFACFAEAMLLE----FEGCHTNFSW 312 (340)
T ss_pred CcCccHHHHHhccchhhHHHHHHHHHHHHH----hcCCccCCCc
Confidence 99 99999999999999999999998876 6666654433
No 11
>PF00745 GlutR_dimer: Glutamyl-tRNAGlu reductase, dimerisation domain; InterPro: IPR015896 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents the helical dimerisation domain of glutamyl-tRNA reductase (1.2.1.70 from EC) []. This enzyme reduces glutamyl-tRNA to glutamate-1-semialdehyde during the first stage of tetrapyrrole biosynthesis by the C5 pathway [, ]. The enzyme requires NADPH as a cofactor.; GO: 0008883 glutamyl-tRNA reductase activity, 0050661 NADP binding, 0033014 tetrapyrrole biosynthetic process, 0055114 oxidation-reduction process; PDB: 1GPJ_A.
Probab=99.72 E-value=1.6e-17 Score=142.36 Aligned_cols=100 Identities=37% Similarity=0.650 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHHh
Q 010322 389 EAQAIITEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIMNKLLHGPMQHLR 468 (513)
Q Consensus 389 ~ae~iI~e~~~~f~~w~~~~~~~p~I~~lr~~~e~i~~~el~~~~~kl~~~~~~~~~~~i~~~~~~~~~k~lh~P~~~lk 468 (513)
.|+.||++++..|..|++.+.+.|+|+.|+++++.+++.|++++++++. +++++++++++++++++|||+|.|+..||
T Consensus 2 ~Ae~II~e~~~~f~~w~~~~~~~p~I~~l~~~~e~i~~~el~~~~~~l~--~~~~~~~~i~~~~~~~~~Kllh~p~~~Lr 79 (101)
T PF00745_consen 2 KAEEIIEEEVDEFMRWLKSRKVDPVIKALREKAEEIRDEELERALKKLD--LDEDDEEVIEKLTRSLVNKLLHPPISNLR 79 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-S------------TTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhhcc--CCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5889999999999999999999999999999999999999999999964 78899999999999999999999999999
Q ss_pred hcCCCCCchhhhHHHHHHHHHHhCCC
Q 010322 469 CDGSDSRTLDETLENMHALNRMFGLE 494 (513)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~lf~l~ 494 (513)
+.+.++. ..++++++++||+||
T Consensus 80 ~~a~~~~----~~~~~~~l~~lF~l~ 101 (101)
T PF00745_consen 80 EAAEEGD----GDEYLEALRKLFGLD 101 (101)
T ss_dssp SS-TTTT-----THHHHHHHHHHHH-
T ss_pred HHHhCCC----HHHHHHHHHHHhCCC
Confidence 7654332 257899999999985
No 12
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=99.67 E-value=1.7e-15 Score=152.53 Aligned_cols=224 Identities=19% Similarity=0.237 Sum_probs=156.3
Q ss_pred hhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCccc------------chhhHHHHHHHhhCc
Q 010322 145 ELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFG------------RNISGLFKHAISVGK 212 (513)
Q Consensus 145 ~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g------------~~L~~lf~~ai~v~k 212 (513)
.+++.+|...|.+.++..|.|.. ..++.+....+..+..| +++|.+-..|..++.
T Consensus 23 ~~Hn~~~~~lGl~~~Y~a~~v~~-------------~~l~~~v~~~~~~g~~G~NVTiP~Ke~~~~~lD~l~~~A~~iGA 89 (283)
T COG0169 23 RMHNAAFRALGLDYVYLAFEVPP-------------EDLPEAVSGIRALGFRGLNVTIPFKEAALPLLDELSPRARLIGA 89 (283)
T ss_pred HHHHHHHHHcCCCceEEEeecCH-------------HHHHHHHHHHHhcCCCeeEECCccHHHHHHHHhcCCHHHHHhCC
Confidence 48899999999999999999985 67888888888777765 356777777777776
Q ss_pred --cc-cc--cccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Q 010322 213 --RV-RT--ETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIC 287 (513)
Q Consensus 213 --~V-r~--et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la 287 (513)
.+ +. ....++|++..|+.. .+.+...+ .+..+++|+|+|||+++++++..|+..|+++|+|+|||.+|+++|+
T Consensus 90 VNTl~~~~~g~l~G~NTD~~G~~~-~L~~~~~~-~~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La 167 (283)
T COG0169 90 VNTLVREDDGKLRGYNTDGIGFLR-ALKEFGLP-VDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELA 167 (283)
T ss_pred ceEEEEccCCEEEEEcCCHHHHHH-HHHhcCCC-cccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 23 32 345789999999875 33322211 2456899999999999999999999999999999999999999999
Q ss_pred HHhCCcc--eeecccchHHhhcCCCcEEEEcCCCCccCCChh-hhh-cCCchhhhcCCcEEEEeccCCCCCCcccccccC
Q 010322 288 EELNGVE--IIYKPLSEMLSCAADADVVFTSTASEAPLFLKD-HVQ-DLPPVEAAVGGLRLFIDISVPRNVGSCVADVET 363 (513)
Q Consensus 288 ~~~g~~~--~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~~~-~l~-~~~~~~~~~~g~~viiDlavPrdidp~v~~l~g 363 (513)
+.++... +......++.. ...+|+||+|||.++.--... .+. .. .....+++|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~-~~~~dliINaTp~Gm~~~~~~~~~~~~~------l~~~~~v~D~--------------- 225 (283)
T COG0169 168 DLFGELGAAVEAAALADLEG-LEEADLLINATPVGMAGPEGDSPVPAEL------LPKGAIVYDV--------------- 225 (283)
T ss_pred HHhhhccccccccccccccc-ccccCEEEECCCCCCCCCCCCCCCcHHh------cCcCCEEEEe---------------
Confidence 9987321 11112222221 126999999999987642100 010 00 0122455554
Q ss_pred eEEEccCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC
Q 010322 364 ARVYNVDDLKEVVAANKEDRL-RKAMEAQAIITEESKQFAAWRDSLE 409 (513)
Q Consensus 364 v~ly~iDdl~~v~~~~~~~R~-~~~~~ae~iI~e~~~~f~~w~~~~~ 409 (513)
+|++-+.+.+..+. +++ +.+.+.+|++.|.+++|+.|++...
T Consensus 226 --vY~P~~TplL~~A~--~~G~~~idGl~Mlv~Qaa~aF~lwtg~~p 268 (283)
T COG0169 226 --VYNPLETPLLREAR--AQGAKTIDGLGMLVHQAAEAFELWTGVEP 268 (283)
T ss_pred --ccCCCCCHHHHHHH--HcCCeEECcHHHHHHHHHHHHHHHhCCCC
Confidence 45555555543322 222 3577899999999999999998843
No 13
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=99.67 E-value=1.7e-15 Score=153.56 Aligned_cols=226 Identities=18% Similarity=0.163 Sum_probs=155.2
Q ss_pred hhhhHHHHhcCCceeeeeeeeccC-CCCcccCcchhhchHHHHHHHhHhcCccc------------chhhHHHHHHHhhC
Q 010322 145 ELCEHRFLLYNKDATQHLFEVSAG-LDSLVLGEGQILAQVKQVVKVGQGVVGFG------------RNISGLFKHAISVG 211 (513)
Q Consensus 145 ~~~~~~~~~~G~eav~hlf~V~sG-ldS~vvGE~qIlgQvk~A~~~a~~~~~~g------------~~L~~lf~~ai~v~ 211 (513)
.+++.+|...|.++++..|+|... +++ .++..+++..+..++.| +++|.+...|-.++
T Consensus 22 ~ihn~~f~~~gl~~~Y~~~~v~~~~v~~---------~~l~~~~~~l~~~~~~G~nVTiP~K~~v~~~~D~~~~~A~~iG 92 (284)
T PRK12549 22 AMHEAEGDAQGLRYVYRLIDLDALGLTA---------DALPELLDAAERMGFAGLNITHPCKQAVIPHLDELSDDARALG 92 (284)
T ss_pred HHHHHHHHHcCCCeEEEEEeeccccCCH---------HHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhccCCHHHHHhC
Confidence 478899999999999999998521 111 56777777777767666 34566666676666
Q ss_pred c--cc--cccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Q 010322 212 K--RV--RTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIC 287 (513)
Q Consensus 212 k--~V--r~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la 287 (513)
. .+ +.....++|++..|+... + +... .++.+++|+|+|+|++|++++..|...|+++|+|+||+.+|++.++
T Consensus 93 AvNTv~~~~g~l~G~NTD~~G~~~~-l-~~~~--~~~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 93 AVNTVVFRDGRRIGHNTDWSGFAES-F-RRGL--PDASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred CceEEEecCCEEEEEcCCHHHHHHH-H-Hhhc--cCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 6 23 234457899999998752 2 1221 2567899999999999999999999999999999999999999999
Q ss_pred HHhCCc--ceeecccchHHhhcCCCcEEEEcCCCCccCCChhhh--hcCCchhhhcCCcEEEEeccCCCCCCcccccccC
Q 010322 288 EELNGV--EIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHV--QDLPPVEAAVGGLRLFIDISVPRNVGSCVADVET 363 (513)
Q Consensus 288 ~~~g~~--~~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l--~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~g 363 (513)
+.++.. ...+.+++++.+.+.++|+||+||+.+++--....+ ..+ ....+++|+
T Consensus 169 ~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l-------~~~~~v~Di--------------- 226 (284)
T PRK12549 169 DELNARFPAARATAGSDLAAALAAADGLVHATPTGMAKHPGLPLPAELL-------RPGLWVADI--------------- 226 (284)
T ss_pred HHHHhhCCCeEEEeccchHhhhCCCCEEEECCcCCCCCCCCCCCCHHHc-------CCCcEEEEe---------------
Confidence 877421 123344455555678899999999987532100001 001 122455565
Q ss_pred eEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010322 364 ARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSL 408 (513)
Q Consensus 364 v~ly~iDdl~~v~~~~~~~R~~~~~~ae~iI~e~~~~f~~w~~~~ 408 (513)
+|++...+.+..+ .+.....+.+.+|++.|.+.+|+.|++..
T Consensus 227 --vY~P~~T~ll~~A-~~~G~~~~~G~~ML~~Qa~~~f~~wtg~~ 268 (284)
T PRK12549 227 --VYFPLETELLRAA-RALGCRTLDGGGMAVFQAVDAFELFTGRE 268 (284)
T ss_pred --eeCCCCCHHHHHH-HHCCCeEecCHHHHHHHHHHHHHHhcCCC
Confidence 3444444433222 22122356789999999999999999853
No 14
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=99.65 E-value=4.4e-15 Score=150.39 Aligned_cols=229 Identities=19% Similarity=0.178 Sum_probs=151.5
Q ss_pred hhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCccc------------chhhHHHHHHHhhCc
Q 010322 145 ELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFG------------RNISGLFKHAISVGK 212 (513)
Q Consensus 145 ~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g------------~~L~~lf~~ai~v~k 212 (513)
.+++.+|...|.++.+..|++.. .+++..+++.... ++.| +++|.+...|-.++.
T Consensus 22 ~ihn~~f~~~gl~~~y~~~~~~~------------~~~l~~~~~~~~~-~~~G~nVT~P~K~~~~~~~d~~~~~A~~iGA 88 (282)
T TIGR01809 22 HLHNAGYEILGLPDKTYEFETCS------------AEELKEVLSGFGP-QFGGASVTIPLKFAILRFADEHTDRASLIGS 88 (282)
T ss_pred HHHHHHHHHcCCCcEEEeeecCC------------HHHHHHHHHhcCC-CCcEEEECCCCHHHHHHHhhcCCHHHHHhCc
Confidence 47889999999999999999853 0455666654432 4444 345666666776766
Q ss_pred --cc-c--ccccccCCCchHHHHHHHHHHhh-CCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Q 010322 213 --RV-R--TETNIAAGAVSVSSAAVELALMK-LPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAI 286 (513)
Q Consensus 213 --~V-r--~et~i~~~~~Sva~~Av~la~~~-~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~l 286 (513)
.+ + +....++|++..|+... +.+.. + +++.+++|+|||+|++|++++.+|...|+++|+|+||+.+|++.+
T Consensus 89 VNTv~~~~~g~l~G~NTD~~G~~~~-l~~~~~~--~~~~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~L 165 (282)
T TIGR01809 89 VNTLLRTQNGIWKGDNTDWDGIAGA-LANIGKF--EPLAGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRL 165 (282)
T ss_pred eeEEEEcCCCcEEEecCCHHHHHHH-HHhhCCc--cccCCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 23 2 33457899999998752 21111 1 246789999999999999999999999999999999999999999
Q ss_pred HHHhCCc-ceeec-ccchHHhhcCCCcEEEEcCCCCccCCChhhhhcCCc--hhhhcCCcEEEEeccCCCCCCccccccc
Q 010322 287 CEELNGV-EIIYK-PLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPP--VEAAVGGLRLFIDISVPRNVGSCVADVE 362 (513)
Q Consensus 287 a~~~g~~-~~~~~-~~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~--~~~~~~g~~viiDlavPrdidp~v~~l~ 362 (513)
++.++.. .+... ..+++...+.++|+||+||+.++++ ..+.+..... ...+.....+++|+
T Consensus 166 a~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~~~-~~~~l~~~~~~~~~~~~~~~~~v~D~-------------- 230 (282)
T TIGR01809 166 VDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADVPA-DYVDLFATVPFLLLKRKSSEGIFLDA-------------- 230 (282)
T ss_pred HHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCCCC-CHHHhhhhhhhhccccCCCCcEEEEE--------------
Confidence 9987531 11111 1234445567899999999999875 3232221000 00000122455554
Q ss_pred CeEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010322 363 TARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSL 408 (513)
Q Consensus 363 gv~ly~iDdl~~v~~~~~~~R~~~~~~ae~iI~e~~~~f~~w~~~~ 408 (513)
+|++.....+..+ .+.....+.+.+|++.|++.+|+.|++..
T Consensus 231 ---vY~P~~T~ll~~A-~~~G~~~~~Gl~MLv~Qa~~~f~lwtg~~ 272 (282)
T TIGR01809 231 ---AYDPWPTPLVAIV-SAAGWRVISGLQMLLHQGFAQFEQWTGMP 272 (282)
T ss_pred ---eeCCCCCHHHHHH-HHCCCEEECcHHHHHHHHHHHHHHHHCCC
Confidence 3554444333222 22233456789999999999999999864
No 15
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.65 E-value=1.8e-16 Score=158.48 Aligned_cols=235 Identities=16% Similarity=0.240 Sum_probs=172.7
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhch---------H-HHHHHHhHhcCcccc-hhhHHHHH--------HHhhCcc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQ---------V-KQVVKVGQGVVGFGR-NISGLFKH--------AISVGKR 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQ---------v-k~A~~~a~~~~~~g~-~L~~lf~~--------ai~v~k~ 213 (513)
..|||+.+.+.+||.++..+.+|++..+.+ + +..|++|-.+++++. ..+|.|.+ .+++|+.
T Consensus 64 vlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~ 143 (354)
T KOG0024|consen 64 VLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDN 143 (354)
T ss_pred ccccccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCC
Confidence 579999999999999999999999988854 2 357888888887742 33454433 4567888
Q ss_pred ccccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc
Q 010322 214 VRTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV 293 (513)
Q Consensus 214 Vr~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~ 293 (513)
|..+.+...+|+|++.||.+++. -..|.+|||+||||+|..+...++..|+.+|.+++-.+.|+ ++|+++|..
T Consensus 144 vs~eeGAl~ePLsV~~HAcr~~~------vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rl-e~Ak~~Ga~ 216 (354)
T KOG0024|consen 144 VSFEEGALIEPLSVGVHACRRAG------VKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRL-ELAKKFGAT 216 (354)
T ss_pred CchhhcccccchhhhhhhhhhcC------cccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHH-HHHHHhCCe
Confidence 99999999999999999998864 34689999999999999999999999999999999999998 889999863
Q ss_pred ceeecc----cchHHhhc------CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC-CCCc-----c
Q 010322 294 EIIYKP----LSEMLSCA------ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR-NVGS-----C 357 (513)
Q Consensus 294 ~~~~~~----~~~~~~~l------~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr-didp-----~ 357 (513)
.+.... .+++.+.+ ..+|++|+||++...+ ...+.... .+|..+++++.-+. ++.+ .
T Consensus 217 ~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~--~aai~a~r-----~gGt~vlvg~g~~~~~fpi~~v~~k 289 (354)
T KOG0024|consen 217 VTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTI--RAAIKATR-----SGGTVVLVGMGAEEIQFPIIDVALK 289 (354)
T ss_pred EEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHH--HHHHHHhc-----cCCEEEEeccCCCccccChhhhhhh
Confidence 211111 11222221 2489999999997654 33454432 47888888986433 2221 1
Q ss_pred cccccCeEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010322 358 VADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRD 406 (513)
Q Consensus 358 v~~l~gv~ly~iDdl~~v~~~~~~~R~~~~~~ae~iI~e~~~~f~~w~~ 406 (513)
-.++.|++.|.-.++..+++...+.+ ...+.+|+.... |++|.+
T Consensus 290 E~~~~g~fry~~~~y~~ai~li~sGk----i~~k~lIT~r~~-~~~~~e 333 (354)
T KOG0024|consen 290 EVDLRGSFRYCNGDYPTAIELVSSGK----IDVKPLITHRYK-FDDADE 333 (354)
T ss_pred eeeeeeeeeeccccHHHHHHHHHcCC----cCchhheecccc-cchHHH
Confidence 23667899998889999888765432 334567776665 555544
No 16
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=99.62 E-value=2e-14 Score=145.26 Aligned_cols=221 Identities=17% Similarity=0.184 Sum_probs=151.8
Q ss_pred hhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCccc------------chhhHHHHHHHhhCc
Q 010322 145 ELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFG------------RNISGLFKHAISVGK 212 (513)
Q Consensus 145 ~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g------------~~L~~lf~~ai~v~k 212 (513)
.+++.+|...|.++.+..|+|.+ .++++++...+..++.| ++++.+-..|-.++.
T Consensus 22 ~~hn~~~~~~gl~~~y~~~~v~~-------------~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~~d~~~~~A~~iga 88 (278)
T PRK00258 22 LIHNAAFKQLGLDGVYLAILVPP-------------EDLEDAVKGFFALGGRGANVTVPFKEAAFALADELSERARLIGA 88 (278)
T ss_pred HHHHHHHHHcCCCcEEEEEecCH-------------HHHHHHHHHHHhCCCCEEEECcCCHHHHHHHhhcCCHHHHHhCC
Confidence 47889999999999999999975 56777777777766655 345666666666665
Q ss_pred --cc--cccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Q 010322 213 --RV--RTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICE 288 (513)
Q Consensus 213 --~V--r~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~ 288 (513)
.+ +.....+.+++..|+.+.- . ...+ .++.+++|+|+|+|++|++++..|...|+.+|+|+||+.++++++++
T Consensus 89 vNtv~~~~g~l~G~NTD~~G~~~~l-~-~~~~-~~~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~ 165 (278)
T PRK00258 89 VNTLVLEDGRLIGDNTDGIGFVRAL-E-ERLG-VDLKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAK 165 (278)
T ss_pred ceEEEeeCCEEEEEcccHHHHHHHH-H-hccC-CCCCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 23 2334568899999987632 1 1121 35789999999999999999999999998889999999999999998
Q ss_pred HhCCcc-eeecccchHHhhcCCCcEEEEcCCCCccC-CC--hhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccccCe
Q 010322 289 ELNGVE-IIYKPLSEMLSCAADADVVFTSTASEAPL-FL--KDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETA 364 (513)
Q Consensus 289 ~~g~~~-~~~~~~~~~~~~l~~aDVVI~AT~s~~~v-i~--~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~gv 364 (513)
.++... +.+ . .+..+.+.++|+||+||+++++- .. .-....+ ....+++|+.
T Consensus 166 ~~~~~~~~~~-~-~~~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l-------~~~~~v~Div--------------- 221 (278)
T PRK00258 166 LFGALGKAEL-D-LELQEELADFDLIINATSAGMSGELPLPPLPLSLL-------RPGTIVYDMI--------------- 221 (278)
T ss_pred Hhhhccceee-c-ccchhccccCCEEEECCcCCCCCCCCCCCCCHHHc-------CCCCEEEEee---------------
Confidence 875321 112 1 13345578899999999998742 00 0001111 1235667764
Q ss_pred EEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010322 365 RVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSL 408 (513)
Q Consensus 365 ~ly~iDdl~~v~~~~~~~R~~~~~~ae~iI~e~~~~f~~w~~~~ 408 (513)
|++.....+. ...+.......+.+|++.|...+|+.|.+..
T Consensus 222 --Y~P~~T~ll~-~A~~~G~~~~~G~~Ml~~Qa~~~f~~wtg~~ 262 (278)
T PRK00258 222 --YGPLPTPFLA-WAKAQGARTIDGLGMLVHQAAEAFELWTGVR 262 (278)
T ss_pred --cCCCCCHHHH-HHHHCcCeecCCHHHHHHHHHHHHHHHcCCC
Confidence 3333333222 2222222356778999999999999999864
No 17
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=99.62 E-value=2.4e-14 Score=145.30 Aligned_cols=226 Identities=15% Similarity=0.136 Sum_probs=151.0
Q ss_pred hhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCccc------------chhhHHHHHHHhhCc
Q 010322 145 ELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFG------------RNISGLFKHAISVGK 212 (513)
Q Consensus 145 ~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g------------~~L~~lf~~ai~v~k 212 (513)
.+++.+|...|.+++|..|+|.+ .++..+....+..++.| +++|.+...|-.++.
T Consensus 24 ~ihn~~f~~~gl~~~Y~~~~v~~-------------~~l~~~~~~l~~~~~~G~nVTiP~K~~~~~~~D~l~~~A~~iGA 90 (288)
T PRK12749 24 EMQNKALEKAGLPFTYMAFEVDN-------------DSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAKLVGA 90 (288)
T ss_pred HHHHHHHHHcCCCeEEEEEecCH-------------HHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhccCCHHHHHhCc
Confidence 48899999999999999999976 56777777777666655 345666666777766
Q ss_pred --ccc--ccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCC---HHHHHH
Q 010322 213 --RVR--TETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRS---EERVAA 285 (513)
Q Consensus 213 --~Vr--~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs---~~ra~~ 285 (513)
.|. +...++.|++..|+... +.. .+ .++.+++|+|+|+|+++++++..|...|+++|+|+||+ .+|++.
T Consensus 91 VNTv~~~~g~l~G~NTD~~Gf~~~-l~~--~~-~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~ 166 (288)
T PRK12749 91 INTIVNDDGYLRGYNTDGTGHIRA-IKE--SG-FDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALA 166 (288)
T ss_pred eeEEEccCCEEEEEecCHHHHHHH-HHh--cC-CCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHH
Confidence 232 33457899999997652 211 11 35788999999999999999999999999999999999 468999
Q ss_pred HHHHhCCc---ceeecccch---HHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccc
Q 010322 286 ICEELNGV---EIIYKPLSE---MLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVA 359 (513)
Q Consensus 286 la~~~g~~---~~~~~~~~~---~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~ 359 (513)
+++.++.. .+.+.++++ +.+.+..+|+||+||+.++.--....+ ..... ......+++|+
T Consensus 167 la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivINaTp~Gm~~~~~~~~--~~~~~-~l~~~~~v~D~----------- 232 (288)
T PRK12749 167 FAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESL--VNDIS-LLHPGLLVTEC----------- 232 (288)
T ss_pred HHHHhhhccCceEEEechhhhhhhhhhcccCCEEEECCCCCCCCCCCCCC--CCcHH-HCCCCCEEEEe-----------
Confidence 99887531 122333332 233566899999999987642000000 00000 00112445554
Q ss_pred cccCeEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010322 360 DVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSL 408 (513)
Q Consensus 360 ~l~gv~ly~iDdl~~v~~~~~~~R~~~~~~ae~iI~e~~~~f~~w~~~~ 408 (513)
+|++...+.+..+ .+.-.+.+.+.+|++.|.+.+|+.|.+..
T Consensus 233 ------vY~P~~T~ll~~A-~~~G~~~~~Gl~ML~~Qa~~~f~lwtg~~ 274 (288)
T PRK12749 233 ------VYNPHMTKLLQQA-QQAGCKTIDGYGMLLWQGAEQFTLWTGKD 274 (288)
T ss_pred ------cCCCccCHHHHHH-HHCCCeEECCHHHHHHHHHHHHHHhcCCC
Confidence 3444444333222 22122356778999999999999999864
No 18
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=99.61 E-value=2.5e-14 Score=144.73 Aligned_cols=229 Identities=15% Similarity=0.130 Sum_probs=152.4
Q ss_pred hhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCccc------------chhhHHHHHHHhhCc
Q 010322 145 ELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFG------------RNISGLFKHAISVGK 212 (513)
Q Consensus 145 ~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g------------~~L~~lf~~ai~v~k 212 (513)
.+++.+|...|.++++..|.|.... +.. .++..+++..+..++.| +++|.+...|-.++.
T Consensus 21 ~ihn~~f~~~gl~~~Y~~~~v~~~~----~~~----~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~lD~l~~~A~~iGA 92 (283)
T PRK14027 21 AMHEAEGLAQGRATVYRRIDTLGSR----ASG----QDLKTLLDAALYLGFNGLNITHPYKQAVLPLLDEVSEQATQLGA 92 (283)
T ss_pred HHHHHHHHHcCCCeEEEEEeccccc----CCH----HHHHHHHHHHHhcCCCEEEECccCHHHHHHHhhhCCHHHHHhCC
Confidence 4889999999999999999976311 111 45667777777766666 456777777777776
Q ss_pred --cc-c--ccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Q 010322 213 --RV-R--TETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIC 287 (513)
Q Consensus 213 --~V-r--~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la 287 (513)
.| + ....++.|++..|+... +. ... .+..+++|+|+|+|+.|++++..|...|+++|+|+||+.+|+++++
T Consensus 93 VNTv~~~~~g~l~G~NTD~~Gf~~~-L~-~~~--~~~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 93 VNTVVIDATGHTTGHNTDVSGFGRG-ME-EGL--PNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred ceEEEECCCCcEEEEcCCHHHHHHH-HH-hcC--cCcCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 33 2 34457999999998752 21 211 2467899999999999999999999999999999999999999999
Q ss_pred HHhCCc-c---eeecccchHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccccC
Q 010322 288 EELNGV-E---IIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVET 363 (513)
Q Consensus 288 ~~~g~~-~---~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~g 363 (513)
+.+... . +...+..+....+..+|+||+||+.++.--....+.. . ......+++|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp~Gm~~~~~~~~~~----~-~l~~~~~v~D~--------------- 228 (283)
T PRK14027 169 DVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDV----S-CLTKDHWVGDV--------------- 228 (283)
T ss_pred HHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCCCCCCCCCCCCCCH----H-HcCCCcEEEEc---------------
Confidence 876311 0 1112222223345679999999998864210000100 0 00122455554
Q ss_pred eEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010322 364 ARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSL 408 (513)
Q Consensus 364 v~ly~iDdl~~v~~~~~~~R~~~~~~ae~iI~e~~~~f~~w~~~~ 408 (513)
+|++...+.+..+. +.-.....+.+|++.|.+.+|+.|.+..
T Consensus 229 --vY~P~~T~ll~~A~-~~G~~~~~Gl~MLv~Qa~~~f~lw~G~~ 270 (283)
T PRK14027 229 --VYMPIETELLKAAR-ALGCETLDGTRMAIHQAVDAFRLFTGLE 270 (283)
T ss_pred --ccCCCCCHHHHHHH-HCCCEEEccHHHHHHHHHHHHHHHhCCC
Confidence 34444444433221 1112346778999999999999999864
No 19
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=99.55 E-value=2.1e-13 Score=138.62 Aligned_cols=225 Identities=13% Similarity=0.130 Sum_probs=151.0
Q ss_pred hhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCccc------------chhhHHHHHHHhhCc
Q 010322 145 ELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFG------------RNISGLFKHAISVGK 212 (513)
Q Consensus 145 ~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g------------~~L~~lf~~ai~v~k 212 (513)
.+++.+|...|.++.|..|+|.+ ..+..++...+..++.| +++|.+...|-.++.
T Consensus 26 ~ihn~~f~~~gl~~~Y~~~~v~~-------------~~l~~~~~~~~~~~~~G~nVT~P~K~~v~~~ld~~~~~A~~iGa 92 (289)
T PRK12548 26 AMYNYSFQKAGLDYAYLAFDIPV-------------DKVPDAIKAIKTFNMRGANVTMPCKSEAAKYMDELSPAARIIGA 92 (289)
T ss_pred HHHHHHHHHcCCCEEEEEEecCH-------------HHHHHHHHHHHHCCCCEEEECccCHHHHHHHhhcCCHHHHHhCc
Confidence 48899999999999999999976 56777787777766666 356666667777766
Q ss_pred --cc--cccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH---HHHHH
Q 010322 213 --RV--RTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE---ERVAA 285 (513)
Q Consensus 213 --~V--r~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~---~ra~~ 285 (513)
.+ ++...++.+++..|+... + +... .++.+++++|+|+|++|++++..|...|+++|+++||+. +++++
T Consensus 93 vNTi~~~~g~l~G~NTD~~G~~~~-l-~~~~--~~~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~ 168 (289)
T PRK12548 93 VNTIVNDDGKLTGHITDGLGFVRN-L-REHG--VDVKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQ 168 (289)
T ss_pred eeEEEeECCEEEEEecCHHHHHHH-H-HhcC--CCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHH
Confidence 23 234457899999998752 2 2211 246789999999999999999999999998899999996 78888
Q ss_pred HHHHhCCc----ceeecccc---hHHhhcCCCcEEEEcCCCCccCCChh-hhhcCCchhhhcCCcEEEEeccCCCCCCcc
Q 010322 286 ICEELNGV----EIIYKPLS---EMLSCAADADVVFTSTASEAPLFLKD-HVQDLPPVEAAVGGLRLFIDISVPRNVGSC 357 (513)
Q Consensus 286 la~~~g~~----~~~~~~~~---~~~~~l~~aDVVI~AT~s~~~vi~~~-~l~~~~~~~~~~~g~~viiDlavPrdidp~ 357 (513)
+++++... .....+++ ++.+.+..+|+||+||+.++.--... .+... . ......+++|+.
T Consensus 169 l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilINaTp~Gm~~~~~~~~~~~~---~-~l~~~~~v~D~v-------- 236 (289)
T PRK12548 169 TAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVNATLVGMKPNDGETNIKDT---S-VFRKDLVVADTV-------- 236 (289)
T ss_pred HHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEEeCCCCCCCCCCCCCCCcH---H-hcCCCCEEEEec--------
Confidence 88766321 11112232 33445678899999999886421100 01000 0 001224556653
Q ss_pred cccccCeEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010322 358 VADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSL 408 (513)
Q Consensus 358 v~~l~gv~ly~iDdl~~v~~~~~~~R~~~~~~ae~iI~e~~~~f~~w~~~~ 408 (513)
|++...+.+..+ .+.-...+.+.+|++.|.+.+|+.|++..
T Consensus 237 ---------Y~P~~T~ll~~A-~~~G~~~~~G~~ML~~Qa~~~f~lwtg~~ 277 (289)
T PRK12548 237 ---------YNPKKTKLLEDA-EAAGCKTVGGLGMLLWQGAEAYKLYTGKD 277 (289)
T ss_pred ---------CCCCCCHHHHHH-HHCCCeeeCcHHHHHHHHHHHHHHhcCCC
Confidence 444443333222 11122356789999999999999999864
No 20
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=99.53 E-value=4.5e-13 Score=134.90 Aligned_cols=216 Identities=15% Similarity=0.119 Sum_probs=142.6
Q ss_pred hhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCccc------------chhhHHHHHHHhhCc-
Q 010322 146 LCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFG------------RNISGLFKHAISVGK- 212 (513)
Q Consensus 146 ~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g------------~~L~~lf~~ai~v~k- 212 (513)
+++.+|...|.++++..|+ . .++..+++..+..++.| +++|.+...|-.++.
T Consensus 26 ihn~~f~~~gl~~~Y~~~~--~-------------~~l~~~~~~l~~~~~~G~nVT~P~K~~~~~~lD~l~~~A~~iGAV 90 (272)
T PRK12550 26 FHNYLYEALGLNFLYKAFT--T-------------TDLTAAIGGVRALGIRGCAVSMPFKEAVIPLVDELDPSAQAIESV 90 (272)
T ss_pred HHHHHHHHcCCCcEEEecC--H-------------hHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhhcCCHHHHHhCCe
Confidence 8999999999999999997 2 44666777776666655 356666666776666
Q ss_pred -ccc--ccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHH
Q 010322 213 -RVR--TETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEE 289 (513)
Q Consensus 213 -~Vr--~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~ 289 (513)
.+. .....++|++..|+.. .+ +. .+ ...+++|+|+|+|+.|++++..|...|+.+|+|+||+.++++.+++.
T Consensus 91 NTi~~~~g~l~G~NTD~~Gf~~-~L-~~-~~--~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~ 165 (272)
T PRK12550 91 NTIVNTDGHLKAYNTDYIAIAK-LL-AS-YQ--VPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL 165 (272)
T ss_pred eEEEeeCCEEEEEecCHHHHHH-HH-Hh-cC--CCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 232 3345789999999875 22 11 11 22457899999999999999999999999999999999999999987
Q ss_pred hCCcceeecccchHHhhcCCCcEEEEcCCCCccC-CChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccccCeEEEc
Q 010322 290 LNGVEIIYKPLSEMLSCAADADVVFTSTASEAPL-FLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYN 368 (513)
Q Consensus 290 ~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~v-i~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~gv~ly~ 368 (513)
++. .+. ++. ....+|+||+||+.++.- ..... ..+... ......+++|+ +|+
T Consensus 166 ~~~---~~~--~~~--~~~~~dlvINaTp~Gm~~~~~~~~-~pi~~~--~l~~~~~v~D~-----------------vY~ 218 (272)
T PRK12550 166 YGY---EWR--PDL--GGIEADILVNVTPIGMAGGPEADK-LAFPEA--EIDAASVVFDV-----------------VAL 218 (272)
T ss_pred hCC---cch--hhc--ccccCCEEEECCccccCCCCcccc-CCCCHH--HcCCCCEEEEe-----------------ecC
Confidence 742 111 111 124689999999987531 00000 000000 00112345554 344
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010322 369 VDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLE 409 (513)
Q Consensus 369 iDdl~~v~~~~~~~R~~~~~~ae~iI~e~~~~f~~w~~~~~ 409 (513)
+.....+..+ .+.-.+.+.+.+|++.|.+.+|+.|.+...
T Consensus 219 P~~T~ll~~A-~~~G~~~i~Gl~MLi~Qa~~~f~lwtg~~~ 258 (272)
T PRK12550 219 PAETPLIRYA-RARGKTVITGAEVIALQAVEQFVLYTGVRP 258 (272)
T ss_pred CccCHHHHHH-HHCcCeEeCCHHHHHHHHHHHHHHHhCCCC
Confidence 4444443322 222223567789999999999999998643
No 21
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=99.51 E-value=6.9e-13 Score=133.54 Aligned_cols=219 Identities=15% Similarity=0.180 Sum_probs=147.4
Q ss_pred hhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCccc------------chhhHHHHHHHhhCc
Q 010322 145 ELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFG------------RNISGLFKHAISVGK 212 (513)
Q Consensus 145 ~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g------------~~L~~lf~~ai~v~k 212 (513)
.+++.+|...|.++.+..|+|.+ .++..+++..+..++.| +++|.+...|-.++.
T Consensus 17 ~~hn~~~~~~g~~~~y~~~~v~~-------------~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~~d~~~~~A~~~ga 83 (270)
T TIGR00507 17 LIHNAFFKQLGLEGPYIAFLVPP-------------DDLEDALSGFFALGFKGANVTSPFKEEAFQFLDEIDERAKLAGA 83 (270)
T ss_pred HHHHHHHHHcCCCcEEEEEecCH-------------HHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhhhCCHHHHHhCC
Confidence 47889999999999999999976 56777777777666655 345666666666665
Q ss_pred --cc--cccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Q 010322 213 --RV--RTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICE 288 (513)
Q Consensus 213 --~V--r~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~ 288 (513)
.+ +.....+.+++..|+... +.+ .. ....+++++|+|+|++|++++..|...|+ +|+++||+.++++++++
T Consensus 84 vNti~~~~g~l~g~NTD~~G~~~~-l~~-~~--~~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~ 158 (270)
T TIGR00507 84 VNTLKLEDGKLVGYNTDGIGLVSD-LER-LI--PLRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAE 158 (270)
T ss_pred ceEEEeeCCEEEEEcCCHHHHHHH-HHh-cC--CCccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 23 233457889999998763 322 11 24568899999999999999999999997 79999999999999988
Q ss_pred HhCCc-ceeecccchHHhhcCCCcEEEEcCCCCccC-CChhhh--hcCCchhhhcCCcEEEEeccCCCCCCcccccccCe
Q 010322 289 ELNGV-EIIYKPLSEMLSCAADADVVFTSTASEAPL-FLKDHV--QDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETA 364 (513)
Q Consensus 289 ~~g~~-~~~~~~~~~~~~~l~~aDVVI~AT~s~~~v-i~~~~l--~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~gv 364 (513)
.++.. .....+.++ .....+|+||+||+.++.- +....+ ..+ ....+++|+..
T Consensus 159 ~~~~~~~~~~~~~~~--~~~~~~DivInatp~gm~~~~~~~~~~~~~l-------~~~~~v~D~~y-------------- 215 (270)
T TIGR00507 159 RFQRYGEIQAFSMDE--LPLHRVDLIINATSAGMSGNIDEPPVPAEKL-------KEGMVVYDMVY-------------- 215 (270)
T ss_pred HHhhcCceEEechhh--hcccCccEEEECCCCCCCCCCCCCCCCHHHc-------CCCCEEEEecc--------------
Confidence 76421 112222222 2245799999999997531 110001 111 12257788753
Q ss_pred EEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010322 365 RVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSL 408 (513)
Q Consensus 365 ~ly~iDdl~~v~~~~~~~R~~~~~~ae~iI~e~~~~f~~w~~~~ 408 (513)
++.+.. ..+...+.....+.+.+|++.|...+|+.|.+..
T Consensus 216 ---~p~~T~-ll~~A~~~G~~~vdG~~Ml~~Qa~~~f~~w~g~~ 255 (270)
T TIGR00507 216 ---NPGETP-FLAEAKSLGTKTIDGLGMLVAQAALAFELWTGVE 255 (270)
T ss_pred ---CCCCCH-HHHHHHHCCCeeeCCHHHHHHHHHHHHHHHcCCC
Confidence 111111 1222222122356778999999999999999864
No 22
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=99.48 E-value=9.6e-13 Score=142.53 Aligned_cols=225 Identities=12% Similarity=0.129 Sum_probs=160.4
Q ss_pred hhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCccc------------chhhHHHHHHHhhCc
Q 010322 145 ELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFG------------RNISGLFKHAISVGK 212 (513)
Q Consensus 145 ~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g------------~~L~~lf~~ai~v~k 212 (513)
.+++.+|...|.++.+..|+|.+ +.+..+.+.++..++.| ++++.+...|-.++.
T Consensus 232 ~~hn~~f~~~gl~~~Y~~~~v~~-------------~~l~~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~~~~~A~~iGA 298 (477)
T PRK09310 232 LSHNPLFSQLSLNCPYIKLPLTP-------------QELPKFFSTIRDLPFLGLSVTMPLKTAVLDFLDKLDPSVKLCGS 298 (477)
T ss_pred HHHHHHHHHcCCCcEEEEeecCH-------------HHHHHHHHHHHhCCCCEEEECccCHHHHHHHhccCCHHHHHhCc
Confidence 37888999999999999999976 55677777777766655 355666666776666
Q ss_pred --cc--cccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Q 010322 213 --RV--RTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICE 288 (513)
Q Consensus 213 --~V--r~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~ 288 (513)
.| +....+|.|++..|+... +.+ .+ .++.+++++|+|+|++|++++..|...|+ +|+++||+.++++.+++
T Consensus 299 VNTv~~~~g~l~G~NTD~~G~~~~-l~~--~~-~~~~~k~vlIiGaGgiG~aia~~L~~~G~-~V~i~~R~~~~~~~la~ 373 (477)
T PRK09310 299 CNTLVFRNGKIEGYNTDGEGLFSL-LKQ--KN-IPLNNQHVAIVGAGGAAKAIATTLARAGA-ELLIFNRTKAHAEALAS 373 (477)
T ss_pred ceEEEeeCCEEEEEecCHHHHHHH-HHh--cC-CCcCCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 23 344567999999998752 212 11 35688999999999999999999999998 79999999999988888
Q ss_pred HhCCcceeecccchHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccccCeEEEc
Q 010322 289 ELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYN 368 (513)
Q Consensus 289 ~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~gv~ly~ 368 (513)
.++. ...+++++.+ +.++|+||+||+.+.++ .+.+ . .+++|+.. +
T Consensus 374 ~~~~---~~~~~~~~~~-l~~~DiVInatP~g~~~--~~~l-----------~-~~v~D~~Y-----------------~ 418 (477)
T PRK09310 374 RCQG---KAFPLESLPE-LHRIDIIINCLPPSVTI--PKAF-----------P-PCVVDINT-----------------L 418 (477)
T ss_pred Hhcc---ceechhHhcc-cCCCCEEEEcCCCCCcc--hhHH-----------h-hhEEeccC-----------------C
Confidence 7653 2233444332 56899999999998764 1111 1 26788753 2
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Q 010322 369 VDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPTIKKLRAYAER 423 (513)
Q Consensus 369 iDdl~~v~~~~~~~R~~~~~~ae~iI~e~~~~f~~w~~~~~~~p~I~~lr~~~e~ 423 (513)
+.+... +....+.-...+.+.+|++.|+..+|+.|.+..-...+++-+|....+
T Consensus 419 P~~T~l-l~~A~~~G~~~~~G~~Ml~~Qa~~~f~lw~g~~~~~~~~~~~~~~~~~ 472 (477)
T PRK09310 419 PKHSPY-TQYARSQGSSIIYGYEMFAEQALLQFRLWFPTLLFKHLEKTFRRRVAN 472 (477)
T ss_pred CCCCHH-HHHHHHCcCEEECcHHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHH
Confidence 111111 111111112346778999999999999999988777777777766544
No 23
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=99.46 E-value=1.5e-13 Score=143.36 Aligned_cols=214 Identities=17% Similarity=0.269 Sum_probs=144.3
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCcccc-----hhhHHHHHHHhhCcc----
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVGFGR-----NISGLFKHAISVGKR---- 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~~g~-----~L~~lf~~ai~v~k~---- 213 (513)
..|||+++++.+++ ..+...+|++.+..+. +..|+.|.+.+..|. ..+|.|++++.++..
T Consensus 58 i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~ 136 (350)
T COG1063 58 ILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLA 136 (350)
T ss_pred ccCccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCee
Confidence 68999999999999 7788999998887532 346777775544432 268999999988851
Q ss_pred -c----cccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Q 010322 214 -V----RTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICE 288 (513)
Q Consensus 214 -V----r~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~ 288 (513)
+ ..+.....+|+++++++..... ....+.+|+|+|+|+||.+++..++..|+.+|++++++++|+ ++|+
T Consensus 137 ~~pd~~~~~~aal~epla~~~~~~a~~~-----~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl-~~A~ 210 (350)
T COG1063 137 KLPDGIDEEAAALTEPLATAYHGHAERA-----AVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERL-ELAK 210 (350)
T ss_pred cCCCCCChhhhhhcChhhhhhhhhhhcc-----CCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH-HHHH
Confidence 2 2233456789999966632221 223445999999999999999999999999999999999998 7888
Q ss_pred HhCCcceeecccc-hHH----hhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC--CCCcc-c
Q 010322 289 ELNGVEIIYKPLS-EML----SCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR--NVGSC-V 358 (513)
Q Consensus 289 ~~g~~~~~~~~~~-~~~----~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr--didp~-v 358 (513)
++++.+....+.+ +.. +.. .++|+||+|||++..+ .+.++.+. ++|..+++++.-+. .+++. +
T Consensus 211 ~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G~~~~~--~~ai~~~r-----~gG~v~~vGv~~~~~~~~~~~~~ 283 (350)
T COG1063 211 EAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPAL--DQALEALR-----PGGTVVVVGVYGGEDIPLPAGLV 283 (350)
T ss_pred HhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCCCHHHH--HHHHHHhc-----CCCEEEEEeccCCccCccCHHHH
Confidence 8544332333322 111 222 3699999999976544 34555443 57889999986433 22221 1
Q ss_pred ----ccccCeEE-EccCCHHHHHHHHH
Q 010322 359 ----ADVETARV-YNVDDLKEVVAANK 380 (513)
Q Consensus 359 ----~~l~gv~l-y~iDdl~~v~~~~~ 380 (513)
.++.|... +...++...++...
T Consensus 284 ~~kel~l~gs~~~~~~~~~~~~~~ll~ 310 (350)
T COG1063 284 VSKELTLRGSLRPSGREDFERALDLLA 310 (350)
T ss_pred HhcccEEEeccCCCCcccHHHHHHHHH
Confidence 13344432 45556666655543
No 24
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=99.42 E-value=1.2e-12 Score=122.68 Aligned_cols=96 Identities=19% Similarity=0.280 Sum_probs=81.4
Q ss_pred hHHHHHHHHHHhhCCCCCCCCCeEEEEcccHH-HHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHH
Q 010322 226 SVSSAAVELALMKLPESSHATARMLVIGAGKM-GKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEML 304 (513)
Q Consensus 226 Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~m-G~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~ 304 (513)
.++++++++++..+ +++.|++|+|||+|.| |..++++|...|+ +|++++|+.+ ++.
T Consensus 26 ~~~~a~v~l~~~~~--~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~--------------------~l~ 82 (168)
T cd01080 26 CTPAGILELLKRYG--IDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK--------------------NLK 82 (168)
T ss_pred ChHHHHHHHHHHcC--CCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch--------------------hHH
Confidence 48888999988776 5799999999999997 8889999999999 5999999842 334
Q ss_pred hhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCC
Q 010322 305 SCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVG 355 (513)
Q Consensus 305 ~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdid 355 (513)
+.+.++|+||+||++++ +++.++++. ..++||+++|||+|
T Consensus 83 ~~l~~aDiVIsat~~~~-ii~~~~~~~----------~~viIDla~prdvd 122 (168)
T cd01080 83 EHTKQADIVIVAVGKPG-LVKGDMVKP----------GAVVIDVGINRVPD 122 (168)
T ss_pred HHHhhCCEEEEcCCCCc-eecHHHccC----------CeEEEEccCCCccc
Confidence 45678999999999999 888887632 38999999999987
No 25
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=99.34 E-value=3.8e-12 Score=131.60 Aligned_cols=123 Identities=18% Similarity=0.286 Sum_probs=96.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHH-HcCCCeEEEEeCCHHHHHHHHHHhCCc-ceeecccchHHhhcCCCcEEEEcCCCCcc
Q 010322 245 ATARMLVIGAGKMGKLVIKHLV-AKGCTKMVVVNRSEERVAAICEELNGV-EIIYKPLSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~-~~G~~~V~v~nRs~~ra~~la~~~g~~-~~~~~~~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
..++++|||+|.+|+.++..|. ..++++|+|+||+++++++|++++... .+.+.+.+++.+++.++|+||+||++..|
T Consensus 128 ~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p 207 (326)
T TIGR02992 128 DSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSETP 207 (326)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCCc
Confidence 5679999999999999999997 478889999999999999999877311 12344567788888999999999999999
Q ss_pred CCChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccccCeEEEccCCHHHH
Q 010322 323 LFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEV 375 (513)
Q Consensus 323 vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~gv~ly~iDdl~~v 375 (513)
++..++++.... -..+..|.+.||+++|.+ +.++.+|.+|++..+
T Consensus 208 ~i~~~~l~~g~~------i~~vg~~~p~~rEld~~~--l~~a~~~vvD~~~~~ 252 (326)
T TIGR02992 208 ILHAEWLEPGQH------VTAMGSDAEHKNEIDPAV--IAKADHYVADRLSQT 252 (326)
T ss_pred EecHHHcCCCcE------EEeeCCCCCCceecCHHH--HhccCEEEcCCHHHH
Confidence 998888754211 112333555789999987 567788889998875
No 26
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=99.34 E-value=3.9e-11 Score=131.58 Aligned_cols=221 Identities=17% Similarity=0.183 Sum_probs=146.1
Q ss_pred hhhhHHHHhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCccc------------chhhHHHHHHHhhCc
Q 010322 145 ELCEHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFG------------RNISGLFKHAISVGK 212 (513)
Q Consensus 145 ~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g------------~~L~~lf~~ai~v~k 212 (513)
.+++.+|...|.++.+..|+|. .+..+.+..+..++.| ++++.+...|-.++.
T Consensus 269 ~ihn~~f~~~gl~~~Y~~~~v~---------------~l~~~~~~l~~~~~~G~nVTiP~K~~v~~~lD~~~~~A~~iGA 333 (529)
T PLN02520 269 ILHNEAFKSVGFNGVYVHLLVD---------------DLAKFLQTYSSPDFAGFSCTIPHKEDALKCCDEVDPIAKSIGA 333 (529)
T ss_pred HHHHHHHHHCCCCcEEEEeehh---------------hHHHHHHHHhhCCCCEEEECcCCHHHHHHHhccCCHHHHHhCC
Confidence 3788899999999999999872 2445566555555555 345666666776766
Q ss_pred --cc-c---ccccccCCCchHHHHHHHHHHhhC--------CCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeC
Q 010322 213 --RV-R---TETNIAAGAVSVSSAAVELALMKL--------PESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNR 278 (513)
Q Consensus 213 --~V-r---~et~i~~~~~Sva~~Av~la~~~~--------~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nR 278 (513)
.+ + ....++.|++..|+... +.+ .+ ...++.+++|+|+|+|++|++++..|...|+ +|+++||
T Consensus 334 VNTvv~~~~~g~l~G~NTD~~G~~~~-l~~-~~~~~~~~~~~~~~~~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR 410 (529)
T PLN02520 334 INTIIRRPSDGKLVGYNTDYIGAISA-IED-GLRASGSSPASGSPLAGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANR 410 (529)
T ss_pred ceEEEEeCCCCEEEEEcccHHHHHHH-HHh-hhcccccccccccCCCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcC
Confidence 23 2 23457899999998652 211 11 0024678999999999999999999999999 7999999
Q ss_pred CHHHHHHHHHHhCCcceeecccchHHhhc-CCCcEEEEcCCCCccC-CChhhhhcCCchhhhcCCcEEEEeccCCCCCCc
Q 010322 279 SEERVAAICEELNGVEIIYKPLSEMLSCA-ADADVVFTSTASEAPL-FLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGS 356 (513)
Q Consensus 279 s~~ra~~la~~~g~~~~~~~~~~~~~~~l-~~aDVVI~AT~s~~~v-i~~~~l~~~~~~~~~~~g~~viiDlavPrdidp 356 (513)
+.++++.+++.++. ...++++..+.. ..+|+||+||+.++.- .....+.... .....+++|+
T Consensus 411 ~~e~a~~la~~l~~---~~~~~~~~~~~~~~~~diiINtT~vGm~~~~~~~pl~~~~-----l~~~~~v~D~-------- 474 (529)
T PLN02520 411 TYERAKELADAVGG---QALTLADLENFHPEEGMILANTTSVGMQPNVDETPISKHA-----LKHYSLVFDA-------- 474 (529)
T ss_pred CHHHHHHHHHHhCC---ceeeHhHhhhhccccCeEEEecccCCCCCCCCCCcccHhh-----CCCCCEEEEe--------
Confidence 99999999988753 233444443322 4689999999988642 1111111000 0122455665
Q ss_pred ccccccCeEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010322 357 CVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLE 409 (513)
Q Consensus 357 ~v~~l~gv~ly~iDdl~~v~~~~~~~R~~~~~~ae~iI~e~~~~f~~w~~~~~ 409 (513)
+|++.+...+..+. +.-...+.+.+|++.|++.+|+.|++...
T Consensus 475 ---------vY~P~~T~ll~~A~-~~G~~~~~Gl~MLv~Qa~~~f~lwtg~~~ 517 (529)
T PLN02520 475 ---------VYTPKITRLLREAE-ESGAIIVSGTEMFIRQAYEQFERFTGLPA 517 (529)
T ss_pred ---------ccCCCcCHHHHHHH-HCCCeEeCcHHHHHHHHHHHHHHHhCCCC
Confidence 34444444433221 11123467789999999999999998643
No 27
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=99.27 E-value=6.4e-12 Score=128.91 Aligned_cols=181 Identities=19% Similarity=0.316 Sum_probs=129.8
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchH-----------HHHHHHhHhcCcccchhhHHHHHHHhhCcc----ccc
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQV-----------KQVVKVGQGVVGFGRNISGLFKHAISVGKR----VRT 216 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQv-----------k~A~~~a~~~~~~g~~L~~lf~~ai~v~k~----Vr~ 216 (513)
...|||.++.+.+|+++++++-+|++..++-+ .+-.+.|.+....|...+|.|++++.++.+ ++.
T Consensus 59 ~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~ 138 (339)
T COG1064 59 LIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPE 138 (339)
T ss_pred ccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCC
Confidence 46899999999999999999999999988432 234455666667788899999998887753 333
Q ss_pred cccc-cCCCchHH----HHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC
Q 010322 217 ETNI-AAGAVSVS----SAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN 291 (513)
Q Consensus 217 et~i-~~~~~Sva----~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g 291 (513)
.... ...|+.++ |.+++.+ +..+|++|+|+|+|+.|...++++++.|+ +|+.++|++++. ++++++|
T Consensus 139 ~~d~~~aApllCaGiT~y~alk~~------~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~-e~a~~lG 210 (339)
T COG1064 139 GLDLAEAAPLLCAGITTYRALKKA------NVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKL-ELAKKLG 210 (339)
T ss_pred CCChhhhhhhhcCeeeEeeehhhc------CCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHH-HHHHHhC
Confidence 3221 12244333 4444432 23479999999999999999999999996 699999999988 8899998
Q ss_pred Ccceeeccc-chHHhhcC-CCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 292 GVEIIYKPL-SEMLSCAA-DADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 292 ~~~~~~~~~-~~~~~~l~-~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
+. ..+... ++..+.+. .+|+||++++ +..+ ...++.+. ++|+.+++++.
T Consensus 211 Ad-~~i~~~~~~~~~~~~~~~d~ii~tv~-~~~~--~~~l~~l~-----~~G~~v~vG~~ 261 (339)
T COG1064 211 AD-HVINSSDSDALEAVKEIADAIIDTVG-PATL--EPSLKALR-----RGGTLVLVGLP 261 (339)
T ss_pred Cc-EEEEcCCchhhHHhHhhCcEEEECCC-hhhH--HHHHHHHh-----cCCEEEEECCC
Confidence 63 222221 22223232 3999999999 6554 34555543 47889999875
No 28
>PRK08291 ectoine utilization protein EutC; Validated
Probab=99.27 E-value=2e-11 Score=126.52 Aligned_cols=141 Identities=20% Similarity=0.270 Sum_probs=104.5
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhCCc-ceeecc
Q 010322 222 AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVA-KGCTKMVVVNRSEERVAAICEELNGV-EIIYKP 299 (513)
Q Consensus 222 ~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~-~G~~~V~v~nRs~~ra~~la~~~g~~-~~~~~~ 299 (513)
.++.+++..+.... .....++++|||+|.+|+.++..+.. .++++|.++||++++++.+++++... .+.+..
T Consensus 114 ~rT~a~~~~a~~~l------a~~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~ 187 (330)
T PRK08291 114 VRTAAAGAVAARHL------AREDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTV 187 (330)
T ss_pred HHHHHHHHHHHHHh------CCCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEE
Confidence 34555666554421 12346899999999999999999885 67889999999999999999876421 134445
Q ss_pred cchHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccccCeEEEccCCHHHHH
Q 010322 300 LSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVV 376 (513)
Q Consensus 300 ~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~gv~ly~iDdl~~v~ 376 (513)
++++.+++.++|+||+||++..|++..++++... +-..+..|++.||+++|.+ ++++.+|.+|++..+.
T Consensus 188 ~~d~~~al~~aDiVi~aT~s~~p~i~~~~l~~g~------~v~~vg~d~~~~rEld~~~--l~~a~~v~vD~~~~~~ 256 (330)
T PRK08291 188 ARDVHEAVAGADIIVTTTPSEEPILKAEWLHPGL------HVTAMGSDAEHKNEIAPAV--FAAADLYVCDRLSQTR 256 (330)
T ss_pred eCCHHHHHccCCEEEEeeCCCCcEecHHHcCCCc------eEEeeCCCCCCcccCCHHH--HhhCCEEEeCCHHHHH
Confidence 6778888899999999999999999877765321 1112333566789999988 5678888899988753
No 29
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.19 E-value=3.3e-11 Score=121.49 Aligned_cols=183 Identities=17% Similarity=0.270 Sum_probs=117.4
Q ss_pred cCCceeeeeeeeccCCC------CcccCcchhhchH----------HHHHHHhHhcCcccc-------hhhHHHHHHHhh
Q 010322 154 YNKDATQHLFEVSAGLD------SLVLGEGQILAQV----------KQVVKVGQGVVGFGR-------NISGLFKHAISV 210 (513)
Q Consensus 154 ~G~eav~hlf~V~sGld------S~vvGE~qIlgQv----------k~A~~~a~~~~~~g~-------~L~~lf~~ai~v 210 (513)
.|||+++.+.+|++++. ++.+|++.+.... .+.++.|......|. ..++.|++++.+
T Consensus 2 ~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~v 81 (280)
T TIGR03366 2 LGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCHL 81 (280)
T ss_pred CCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEEe
Confidence 59999999999999998 8999998876432 123344544333331 247889998887
Q ss_pred Ccc--c---cccccc-cCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Q 010322 211 GKR--V---RTETNI-AAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVA 284 (513)
Q Consensus 211 ~k~--V---r~et~i-~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~ 284 (513)
+.. + +..... ...++.+++.+.-.+-... ...+|++|+|+|+|++|.++++.++..|+++|++++++++|.
T Consensus 82 ~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~--~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~- 158 (280)
T TIGR03366 82 PAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAA--GDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRR- 158 (280)
T ss_pred cCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhc--cCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-
Confidence 653 1 221111 1123333322211111112 234799999999999999999999999998788889998887
Q ss_pred HHHHHhCCcceeecccch----HHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 285 AICEELNGVEIIYKPLSE----MLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 285 ~la~~~g~~~~~~~~~~~----~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
++++++|.. .+....+ ..+.. .++|+||+|++++..+ ...++.+. ++|..++++.
T Consensus 159 ~~a~~~Ga~--~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~--~~~~~~l~-----~~G~iv~~G~ 219 (280)
T TIGR03366 159 ELALSFGAT--ALAEPEVLAERQGGLQNGRGVDVALEFSGATAAV--RACLESLD-----VGGTAVLAGS 219 (280)
T ss_pred HHHHHcCCc--EecCchhhHHHHHHHhCCCCCCEEEECCCChHHH--HHHHHHhc-----CCCEEEEecc
Confidence 778888752 2222222 11111 3699999999987654 34455443 4677777775
No 30
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=99.13 E-value=5.7e-10 Score=106.71 Aligned_cols=129 Identities=25% Similarity=0.299 Sum_probs=90.7
Q ss_pred CchHHHHHHHHHHhhCC--CCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC---Ccceee
Q 010322 224 AVSVSSAAVELALMKLP--ESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN---GVEIIY 297 (513)
Q Consensus 224 ~~Sva~~Av~la~~~~~--~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g---~~~~~~ 297 (513)
...++++++..+.+.+. +.++.+++++|+|+ |++|+.+++.|...|. +|++++|+.++++.+++.++ +..+..
T Consensus 4 ~~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~ 82 (194)
T cd01078 4 SNTTAAAAVAAAGKALELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGA 82 (194)
T ss_pred cHHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEE
Confidence 34456666666655431 13678999999996 9999999999999986 69999999999988887653 111122
Q ss_pred ---cccchHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccc
Q 010322 298 ---KPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADV 361 (513)
Q Consensus 298 ---~~~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l 361 (513)
...+++.+.+.++|+||+||+++++.. ....... ....+++|+.+|+++++.+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~diVi~at~~g~~~~--~~~~~~~------~~~~vv~D~~~~~~~~~~~~~~ 141 (194)
T cd01078 83 VETSDDAARAAAIKGADVVFAAGAAGVELL--EKLAWAP------KPLAVAADVNAVPPVGIEGIDV 141 (194)
T ss_pred eeCCCHHHHHHHHhcCCEEEECCCCCceec--hhhhccc------CceeEEEEccCCCCCCcccccc
Confidence 223445567889999999999998521 1111111 1237899999999998876543
No 31
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=99.09 E-value=1.2e-10 Score=122.32 Aligned_cols=125 Identities=18% Similarity=0.294 Sum_probs=92.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc-ceeecccchHHhhcCCCcEEEEcCC---C
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV-EIIYKPLSEMLSCAADADVVFTSTA---S 319 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~-~~~~~~~~~~~~~l~~aDVVI~AT~---s 319 (513)
+.+.+|+|+|+|.+|+.+++.|...|+ +|+++||++++++.++..++.. .......+++.+.+.++|+||+|++ .
T Consensus 165 l~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 165 VEPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CCCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 567889999999999999999999999 5999999999987777777531 0111223456677889999999984 3
Q ss_pred Ccc-CCChhhhhcCCchhhhcCCcEEEEeccCCC--CC--------CcccccccCeEEEccCCHHHHH
Q 010322 320 EAP-LFLKDHVQDLPPVEAAVGGLRLFIDISVPR--NV--------GSCVADVETARVYNVDDLKEVV 376 (513)
Q Consensus 320 ~~~-vi~~~~l~~~~~~~~~~~g~~viiDlavPr--di--------dp~v~~l~gv~ly~iDdl~~v~ 376 (513)
+.| +++.+.++.+. ...+++|+++.. ++ +..+....|+..|-+++++..+
T Consensus 244 ~~p~lit~~~l~~mk-------~g~vIvDva~d~GG~~e~~~~t~~d~p~~~~~Gv~~~~v~nlP~~~ 304 (370)
T TIGR00518 244 KAPKLVSNSLVAQMK-------PGAVIVDVAIDQGGCVETSRPTTHDQPTYAVHDVVHYCVANMPGAV 304 (370)
T ss_pred CCCcCcCHHHHhcCC-------CCCEEEEEecCCCCCccCCcCCCCCCCEEEECCeEEEEeCCccccc
Confidence 334 57788887653 226899998643 22 2224455789999999998865
No 32
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=99.07 E-value=3.9e-10 Score=116.88 Aligned_cols=179 Identities=15% Similarity=0.237 Sum_probs=120.9
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCcccc-----hhhHHHHHHHhhCc-----
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVGFGR-----NISGLFKHAISVGK----- 212 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~~g~-----~L~~lf~~ai~v~k----- 212 (513)
..|||+++.+.+| ++..+.+|+..+.... .+-++.|......|. ..++.|++++.++.
T Consensus 62 v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ 139 (343)
T PRK09880 62 VLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIP 139 (343)
T ss_pred ccCcccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEE
Confidence 5799999999999 7888999998876321 122344444333332 23678887766654
Q ss_pred ---cccccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHH
Q 010322 213 ---RVRTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEE 289 (513)
Q Consensus 213 ---~Vr~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~ 289 (513)
.+..+......|.+++++++..+ ....|++|+|+|+|++|.++++.++..|+++|+++++++++. +++++
T Consensus 140 ~P~~l~~~~aa~~~~~~~a~~al~~~------~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~-~~a~~ 212 (343)
T PRK09880 140 YPEKADEKVMAFAEPLAVAIHAAHQA------GDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSL-SLARE 212 (343)
T ss_pred CCCCCCHHHHHhhcHHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHH-HHHHH
Confidence 22222223356778888876543 234789999999999999999999999998899999999887 67888
Q ss_pred hCCcceeecccc-hHHhh---cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 290 LNGVEIIYKPLS-EMLSC---AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 290 ~g~~~~~~~~~~-~~~~~---l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
+|.. ..+...+ +..+. ..++|+||+|+|++..+ ...++.+. ++|..+.++.
T Consensus 213 lGa~-~vi~~~~~~~~~~~~~~g~~D~vid~~G~~~~~--~~~~~~l~-----~~G~iv~~G~ 267 (343)
T PRK09880 213 MGAD-KLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSI--NTCLEVTR-----AKGVMVQVGM 267 (343)
T ss_pred cCCc-EEecCCcccHHHHhccCCCCCEEEECCCCHHHH--HHHHHHhh-----cCCEEEEEcc
Confidence 8853 2222211 22222 12489999999986543 34454442 4677777775
No 33
>PRK06141 ornithine cyclodeaminase; Validated
Probab=99.06 E-value=1.5e-09 Score=111.75 Aligned_cols=123 Identities=20% Similarity=0.320 Sum_probs=87.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVA-KGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~-~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
....++|+|||+|.||+.+++.+.. .+..+|+|+||++++++.|++++......+...++..+++.++||||+||+++.
T Consensus 122 ~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~~ 201 (314)
T PRK06141 122 RKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLSTE 201 (314)
T ss_pred CCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCCC
Confidence 3467899999999999999987765 688899999999999999999874211123345677778899999999999999
Q ss_pred cCCChhhhhcCCchhhhcCCcEEEEeccCC--CCCCcccccccCeEEEccCCHHHHH
Q 010322 322 PLFLKDHVQDLPPVEAAVGGLRLFIDISVP--RNVGSCVADVETARVYNVDDLKEVV 376 (513)
Q Consensus 322 ~vi~~~~l~~~~~~~~~~~g~~viiDlavP--rdidp~v~~l~gv~ly~iDdl~~v~ 376 (513)
|++..++++. +.....++...| +++++.+... ..+| +||+....
T Consensus 202 pvl~~~~l~~--------g~~i~~ig~~~~~~~El~~~~~~~--a~~~-vD~~~~~~ 247 (314)
T PRK06141 202 PLVRGEWLKP--------GTHLDLVGNFTPDMRECDDEAIRR--ASVY-VDTRAGAL 247 (314)
T ss_pred CEecHHHcCC--------CCEEEeeCCCCcccccCCHHHHhc--CcEE-EcCHHHHH
Confidence 9988777642 221223332233 4666665432 2333 78876654
No 34
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=99.05 E-value=2.6e-09 Score=108.62 Aligned_cols=138 Identities=20% Similarity=0.308 Sum_probs=99.3
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc
Q 010322 222 AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS 301 (513)
Q Consensus 222 ~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~ 301 (513)
.++.+++.+++.++.+..+ .++.|++|+|+|+|.||+.+++.|...|+ +|+++||++++...+ ...+. ...+++
T Consensus 128 ~n~~~~Ae~ai~~al~~~~-~~l~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~-~~~g~---~~~~~~ 201 (287)
T TIGR02853 128 YNSIPTAEGAIMMAIEHTD-FTIHGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARI-TEMGL---IPFPLN 201 (287)
T ss_pred EccHhHHHHHHHHHHHhcC-CCCCCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH-HHCCC---eeecHH
Confidence 6888999999887765543 46889999999999999999999999998 699999998876443 33432 334556
Q ss_pred hHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccC-CCCCCcccccccCeEEEccCCHHH
Q 010322 302 EMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISV-PRNVGSCVADVETARVYNVDDLKE 374 (513)
Q Consensus 302 ~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlav-Prdidp~v~~l~gv~ly~iDdl~~ 374 (513)
++.+.+.++|+||+|++.+ +++.+.++.+. ...++||++. |...+.....-.|+..+-..-++.
T Consensus 202 ~l~~~l~~aDiVint~P~~--ii~~~~l~~~k-------~~aliIDlas~Pg~tdf~~Ak~~G~~a~~~~glPg 266 (287)
T TIGR02853 202 KLEEKVAEIDIVINTIPAL--VLTADVLSKLP-------KHAVIIDLASKPGGTDFEYAKKRGIKALLAPGLPG 266 (287)
T ss_pred HHHHHhccCCEEEECCChH--HhCHHHHhcCC-------CCeEEEEeCcCCCCCCHHHHHHCCCEEEEeCCCCc
Confidence 7777889999999999764 55666665542 2489999984 655544443344555553333333
No 35
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=99.03 E-value=2e-09 Score=110.22 Aligned_cols=123 Identities=16% Similarity=0.275 Sum_probs=94.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhCCc-ceeecccchHHhhcCCCcEEEEcCCCCcc
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVA-KGCTKMVVVNRSEERVAAICEELNGV-EIIYKPLSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~-~G~~~V~v~nRs~~ra~~la~~~g~~-~~~~~~~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
..++++|||+|.+|+..+..+.. .+.++|.|+||+++++++|++++... .+.+.+.++..+++.++|||++||++..|
T Consensus 116 da~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P 195 (301)
T PRK06407 116 NVENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTP 195 (301)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCc
Confidence 56899999999999999998886 58899999999999999999887521 22344557788889999999999999999
Q ss_pred CCChhhhhcCCchhhhcCCcEEEEeccCC--CCCCcccccccCeEEEccCCHHHHHH
Q 010322 323 LFLKDHVQDLPPVEAAVGGLRLFIDISVP--RNVGSCVADVETARVYNVDDLKEVVA 377 (513)
Q Consensus 323 vi~~~~l~~~~~~~~~~~g~~viiDlavP--rdidp~v~~l~gv~ly~iDdl~~v~~ 377 (513)
+|..+++++ |-....|+--.| ++++|++.. .+..+-+|++.++..
T Consensus 196 ~~~~~~l~p--------g~hV~aiGs~~p~~~El~~~~l~--~a~~v~vD~~~~~~~ 242 (301)
T PRK06407 196 IFNRKYLGD--------EYHVNLAGSNYPNRREAEHSVLN--DADIVVTEHMEQSLR 242 (301)
T ss_pred EecHHHcCC--------CceEEecCCCCCCcccCCHHHHH--hCCEEEECCHHHHHH
Confidence 998888753 223445554445 678887643 344455788877644
No 36
>PRK07340 ornithine cyclodeaminase; Validated
Probab=99.02 E-value=3.1e-09 Score=108.90 Aligned_cols=122 Identities=19% Similarity=0.282 Sum_probs=90.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVA-KGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~-~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
....++++|||+|.+|+.++.++.. .+.++|.++||++++++.|+++++.....+. .++..+++.++|+||+||++++
T Consensus 122 ~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~~~~~~av~~aDiVitaT~s~~ 200 (304)
T PRK07340 122 PAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-PLDGEAIPEAVDLVVTATTSRT 200 (304)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-ECCHHHHhhcCCEEEEccCCCC
Confidence 4567899999999999999999975 6888999999999999999998853211222 4567778899999999999999
Q ss_pred cCCChhhhhcCCchhhhcCCcEEEEeccCC--CCCCcccccccCeEEEccCCHHHHHH
Q 010322 322 PLFLKDHVQDLPPVEAAVGGLRLFIDISVP--RNVGSCVADVETARVYNVDDLKEVVA 377 (513)
Q Consensus 322 ~vi~~~~l~~~~~~~~~~~g~~viiDlavP--rdidp~v~~l~gv~ly~iDdl~~v~~ 377 (513)
|+|.. +++ +|-....|+...| +++++++.. .+. +-+|++..+..
T Consensus 201 Pl~~~-~~~--------~g~hi~~iGs~~p~~~El~~~~~~--~a~-v~vD~~~~~~~ 246 (304)
T PRK07340 201 PVYPE-AAR--------AGRLVVAVGAFTPDMAELAPRTVR--GSR-LYVDDPAGARH 246 (304)
T ss_pred ceeCc-cCC--------CCCEEEecCCCCCCcccCCHHHHh--hCe-EEEcCHHHHHH
Confidence 99875 442 2333444443344 578877644 344 34688877644
No 37
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=99.01 E-value=5.6e-09 Score=95.66 Aligned_cols=136 Identities=18% Similarity=0.271 Sum_probs=92.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCcc
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
++.+++++|+|+|.||..+++.|...|..+|++++|++++++++++.++.... .....+..+.+.++|+||+||+.+..
T Consensus 16 ~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dvvi~~~~~~~~ 94 (155)
T cd01065 16 ELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGI-AIAYLDLEELLAEADLIINTTPVGMK 94 (155)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccc-ceeecchhhccccCCEEEeCcCCCCC
Confidence 46789999999999999999999998766799999999999888888753100 01234455557899999999999764
Q ss_pred CCChhhh--hcCCchhhhcCCcEEEEecc-CCCCCCcccccccCeEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010322 323 LFLKDHV--QDLPPVEAAVGGLRLFIDIS-VPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESK 399 (513)
Q Consensus 323 vi~~~~l--~~~~~~~~~~~g~~viiDla-vPrdidp~v~~l~gv~ly~iDdl~~v~~~~~~~R~~~~~~ae~iI~e~~~ 399 (513)
-.....+ ..+ ....+++|++ +|.+. .+.+...+.....+....+++.|...
T Consensus 95 ~~~~~~~~~~~~-------~~~~~v~D~~~~~~~~-------------------~l~~~~~~~g~~~v~g~~~~~~q~~~ 148 (155)
T cd01065 95 PGDELPLPPSLL-------KPGGVVYDVVYNPLET-------------------PLLKEARALGAKTIDGLEMLVYQAAE 148 (155)
T ss_pred CCCCCCCCHHHc-------CCCCEEEEcCcCCCCC-------------------HHHHHHHHCCCceeCCHHHHHHHHHH
Confidence 0011011 111 1236888886 33211 12222222223356778999999999
Q ss_pred HHHHHH
Q 010322 400 QFAAWR 405 (513)
Q Consensus 400 ~f~~w~ 405 (513)
+|+.|.
T Consensus 149 ~~~~~~ 154 (155)
T cd01065 149 AFELWT 154 (155)
T ss_pred HHHHhc
Confidence 999996
No 38
>PRK08618 ornithine cyclodeaminase; Validated
Probab=99.00 E-value=2.8e-09 Score=110.33 Aligned_cols=123 Identities=16% Similarity=0.250 Sum_probs=89.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHH-HcCCCeEEEEeCCHHHHHHHHHHhCCc-ceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 244 HATARMLVIGAGKMGKLVIKHLV-AKGCTKMVVVNRSEERVAAICEELNGV-EIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~-~~G~~~V~v~nRs~~ra~~la~~~g~~-~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
...++++|||+|.+|+.++..+. ..++++|.++||++++++++++++... .+.+..+++..+++.++|+||+||++++
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~ 204 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKT 204 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCC
Confidence 35789999999999999998775 468999999999999999999876311 1233456777788899999999999999
Q ss_pred cCCChhhhhcCCchhhhcCCcEEEEeccCC--CCCCcccccccCeEEEccCCHHHHHH
Q 010322 322 PLFLKDHVQDLPPVEAAVGGLRLFIDISVP--RNVGSCVADVETARVYNVDDLKEVVA 377 (513)
Q Consensus 322 ~vi~~~~l~~~~~~~~~~~g~~viiDlavP--rdidp~v~~l~gv~ly~iDdl~~v~~ 377 (513)
|++. ++++. |.....|+--.| +++++.+. ..+..+-+|++.++..
T Consensus 205 p~i~-~~l~~--------G~hV~~iGs~~p~~~E~~~~~~--~~a~~vvvD~~~~~~~ 251 (325)
T PRK08618 205 PVFS-EKLKK--------GVHINAVGSFMPDMQELPSEAI--ARANKVVVESKEAALE 251 (325)
T ss_pred cchH-HhcCC--------CcEEEecCCCCcccccCCHHHH--hhCCEEEECCHHHHHH
Confidence 9988 77743 333444443344 45666442 3444455788877643
No 39
>PRK06823 ornithine cyclodeaminase; Validated
Probab=98.97 E-value=4.6e-09 Score=108.12 Aligned_cols=121 Identities=17% Similarity=0.281 Sum_probs=90.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCccC
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVA-KGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPL 323 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~-~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~v 323 (513)
..++++|||+|.+|+..++.+.. ...++|.|+||+++++++|++.+......+.+.++..+++.++|||++||++..|+
T Consensus 127 d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIV~taT~s~~P~ 206 (315)
T PRK06823 127 HVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAEVAHAANLIVTTTPSREPL 206 (315)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHHHhcCCCEEEEecCCCCce
Confidence 56899999999999999998876 57889999999999999998776421233444577888899999999999999999
Q ss_pred CChhhhhcCCchhhhcCCcEEEEeccCC--CCCCcccccccCeEEEccCCHHHH
Q 010322 324 FLKDHVQDLPPVEAAVGGLRLFIDISVP--RNVGSCVADVETARVYNVDDLKEV 375 (513)
Q Consensus 324 i~~~~l~~~~~~~~~~~g~~viiDlavP--rdidp~v~~l~gv~ly~iDdl~~v 375 (513)
|..++++. |-....|+...| ++++|++.. .+..+-+|++..+
T Consensus 207 ~~~~~l~~--------G~hi~~iGs~~p~~~Eld~~~l~--~a~~vvvD~~~~~ 250 (315)
T PRK06823 207 LQAEDIQP--------GTHITAVGADSPGKQELDAELVA--RADKILVDSIAQC 250 (315)
T ss_pred eCHHHcCC--------CcEEEecCCCCcccccCCHHHHh--hCCEEEECCHHHH
Confidence 98888753 333444443344 678877643 3333446776664
No 40
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.97 E-value=1.3e-08 Score=103.90 Aligned_cols=140 Identities=21% Similarity=0.302 Sum_probs=100.4
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc
Q 010322 222 AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS 301 (513)
Q Consensus 222 ~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~ 301 (513)
.++.+++..|+..+...++ .++.+++|+|||+|.+|+.++..|+..|+ +|++++|++++. ..+..+|. ....++
T Consensus 129 ~ns~~~aegav~~a~~~~~-~~l~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~-~~~~~~G~---~~~~~~ 202 (296)
T PRK08306 129 LNSIPTAEGAIMMAIEHTP-ITIHGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHL-ARITEMGL---SPFHLS 202 (296)
T ss_pred hccHhHHHHHHHHHHHhCC-CCCCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHcCC---eeecHH
Confidence 4666777667766554443 46789999999999999999999999998 699999998775 44556653 344556
Q ss_pred hHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccC-CCCCCcccccccCeEEEccCCHHHHH
Q 010322 302 EMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISV-PRNVGSCVADVETARVYNVDDLKEVV 376 (513)
Q Consensus 302 ~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlav-Prdidp~v~~l~gv~ly~iDdl~~v~ 376 (513)
++.+.+.++|+||+|++. ++++.+.++.+. ...++||++. |...+.......|+..+-...+...+
T Consensus 203 ~l~~~l~~aDiVI~t~p~--~~i~~~~l~~~~-------~g~vIIDla~~pggtd~~~a~~~Gv~~~~~~~lpg~v 269 (296)
T PRK08306 203 ELAEEVGKIDIIFNTIPA--LVLTKEVLSKMP-------PEALIIDLASKPGGTDFEYAEKRGIKALLAPGLPGKV 269 (296)
T ss_pred HHHHHhCCCCEEEECCCh--hhhhHHHHHcCC-------CCcEEEEEccCCCCcCeeehhhCCeEEEEECCCCccC
Confidence 777888999999999864 456677766553 2379999985 54544333344577766555665433
No 41
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=98.96 E-value=1.7e-09 Score=112.50 Aligned_cols=185 Identities=19% Similarity=0.256 Sum_probs=118.5
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHH----------HHHHHhHhcCcc--cc-hhhHHHHHHHhhC-------
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVK----------QVVKVGQGVVGF--GR-NISGLFKHAISVG------- 211 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk----------~A~~~a~~~~~~--g~-~L~~lf~~ai~v~------- 211 (513)
...|||+++.+.+|+++ +.+.+|+..+..... +-++.|...... |. ..++.|++++.++
T Consensus 59 ~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~ 137 (355)
T cd08230 59 LVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKV 137 (355)
T ss_pred eeeccccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEEC
Confidence 35799999999999999 999999998763211 111222221111 11 1356677665544
Q ss_pred -ccccccccccCCCchHHHHHHHHHHhhCC-CCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHH
Q 010322 212 -KRVRTETNIAAGAVSVSSAAVELALMKLP-ESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNR---SEERVAAI 286 (513)
Q Consensus 212 -k~Vr~et~i~~~~~Sva~~Av~la~~~~~-~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nR---s~~ra~~l 286 (513)
+.+. +......|.+++++|+..+..... .....|++|+|+|+|++|.++++.++..|+ +|++++| +++|. ++
T Consensus 138 P~~~~-~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~-~~ 214 (355)
T cd08230 138 PPSLA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKA-DI 214 (355)
T ss_pred CCCCC-cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHH-HH
Confidence 3343 444455688887777654332110 013478999999999999999999999999 5999998 56776 67
Q ss_pred HHHhCCcceeeccc-chHH--hhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 287 CEELNGVEIIYKPL-SEML--SCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 287 a~~~g~~~~~~~~~-~~~~--~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
++++|.. . +... ++.. ....++|+||+|++++..+ .+.++.+. ++|..++++..
T Consensus 215 ~~~~Ga~-~-v~~~~~~~~~~~~~~~~d~vid~~g~~~~~--~~~~~~l~-----~~G~~v~~G~~ 271 (355)
T cd08230 215 VEELGAT-Y-VNSSKTPVAEVKLVGEFDLIIEATGVPPLA--FEALPALA-----PNGVVILFGVP 271 (355)
T ss_pred HHHcCCE-E-ecCCccchhhhhhcCCCCEEEECcCCHHHH--HHHHHHcc-----CCcEEEEEecC
Confidence 8888753 1 2211 1211 1235799999999986543 34555443 46777777753
No 42
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=98.95 E-value=6.9e-09 Score=107.35 Aligned_cols=121 Identities=19% Similarity=0.300 Sum_probs=89.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCccC
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVA-KGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPL 323 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~-~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~v 323 (513)
..++++|||+|.+|+..+..+.. ...++|.|+||++++++.|++++......+...++..+++.++||||+||++..|+
T Consensus 127 ~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P~ 206 (325)
T TIGR02371 127 DSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKPV 206 (325)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCcE
Confidence 56899999999999999888765 46789999999999999998876421122344567788889999999999999999
Q ss_pred CChhhhhcCCchhhhcCCcEEEEeccCC--CCCCcccccccCeEEEccCCHHHHH
Q 010322 324 FLKDHVQDLPPVEAAVGGLRLFIDISVP--RNVGSCVADVETARVYNVDDLKEVV 376 (513)
Q Consensus 324 i~~~~l~~~~~~~~~~~g~~viiDlavP--rdidp~v~~l~gv~ly~iDdl~~v~ 376 (513)
+..++++. |-....|+...| ++++|.+.. .+.+| +||+.++.
T Consensus 207 ~~~~~l~~--------g~~v~~vGs~~p~~~Eld~~~l~--~a~v~-vD~~~~~~ 250 (325)
T TIGR02371 207 VKADWVSE--------GTHINAIGADAPGKQELDPEILK--NAKIF-VDDLEQAT 250 (325)
T ss_pred ecHHHcCC--------CCEEEecCCCCcccccCCHHHHh--cCcEE-ECCHHHHH
Confidence 98877743 323444443344 678887643 23444 78888754
No 43
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=98.94 E-value=6.4e-09 Score=102.20 Aligned_cols=117 Identities=21% Similarity=0.307 Sum_probs=85.6
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCC--eEEEEeCC----HHHH-------HHHHH
Q 010322 222 AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCT--KMVVVNRS----EERV-------AAICE 288 (513)
Q Consensus 222 ~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~--~V~v~nRs----~~ra-------~~la~ 288 (513)
.++.|++.+++..+.+..+ .++.+++|+|+|+|.+|+.++..|...|++ +|+++||+ .+|. ..+++
T Consensus 2 qgt~~v~lAG~~~al~~~g-~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~ 80 (226)
T cd05311 2 HGTAIVTLAGLLNALKLVG-KKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAK 80 (226)
T ss_pred CchHHHHHHHHHHHHHHhC-CCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHH
Confidence 4667888888776665553 468999999999999999999999999998 99999999 4553 45666
Q ss_pred HhCCcceeecccchHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 289 ELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 289 ~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
.++.. . .. .++.+.+.++|+||+||+. .+++++.++.+. .+ .+++|++.|.
T Consensus 81 ~~~~~--~-~~-~~l~~~l~~~dvlIgaT~~--G~~~~~~l~~m~------~~-~ivf~lsnP~ 131 (226)
T cd05311 81 ETNPE--K-TG-GTLKEALKGADVFIGVSRP--GVVKKEMIKKMA------KD-PIVFALANPV 131 (226)
T ss_pred HhccC--c-cc-CCHHHHHhcCCEEEeCCCC--CCCCHHHHHhhC------CC-CEEEEeCCCC
Confidence 55321 1 11 2455667889999999993 456677777653 23 4555888774
No 44
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=98.90 E-value=3.9e-09 Score=111.94 Aligned_cols=183 Identities=13% Similarity=0.138 Sum_probs=122.4
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcC------cccc----hhhHHHHHHHhhC
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVV------GFGR----NISGLFKHAISVG 211 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~------~~g~----~L~~lf~~ai~v~ 211 (513)
...|||+++.+.+|+++++++.+|+.++.... ++.++.|.... .+|. ..++.|++++.++
T Consensus 63 ~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~ 142 (393)
T TIGR02819 63 LVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVP 142 (393)
T ss_pred ccccceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEec
Confidence 35799999999999999999999999977432 12344444321 1121 1357888887776
Q ss_pred c------cccccc---------cccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEE
Q 010322 212 K------RVRTET---------NIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVV 276 (513)
Q Consensus 212 k------~Vr~et---------~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~ 276 (513)
. +++... .....+.+++++++..+ ....|++|+|.|+|++|.++++.++..|++.|+++
T Consensus 143 ~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~~~~------~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~ 216 (393)
T TIGR02819 143 YADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVTA------GVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVG 216 (393)
T ss_pred hhhCceEECCCcccccccccceeeeccHHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEe
Confidence 3 122221 11223566777776543 23478999999999999999999999999877777
Q ss_pred eCCHHHHHHHHHHhCCcceeeccc--ch----HHhhc--CCCcEEEEcCCCCc-------------cCCChhhhhcCCch
Q 010322 277 NRSEERVAAICEELNGVEIIYKPL--SE----MLSCA--ADADVVFTSTASEA-------------PLFLKDHVQDLPPV 335 (513)
Q Consensus 277 nRs~~ra~~la~~~g~~~~~~~~~--~~----~~~~l--~~aDVVI~AT~s~~-------------~vi~~~~l~~~~~~ 335 (513)
+++++|. ++++++|.. .+... .+ +.+.. .++|+||+|+|.+. ..+ .+.++.+.
T Consensus 217 d~~~~r~-~~a~~~Ga~--~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~-- 290 (393)
T TIGR02819 217 DLNPARL-AQARSFGCE--TVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVL-NSLMEVTR-- 290 (393)
T ss_pred CCCHHHH-HHHHHcCCe--EEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHH-HHHHHHhh--
Confidence 8888777 778888852 22221 12 22222 36899999999873 122 34555443
Q ss_pred hhhcCCcEEEEecc
Q 010322 336 EAAVGGLRLFIDIS 349 (513)
Q Consensus 336 ~~~~~g~~viiDla 349 (513)
++|+.+++++.
T Consensus 291 ---~~G~i~~~G~~ 301 (393)
T TIGR02819 291 ---VGGAIGIPGLY 301 (393)
T ss_pred ---CCCEEEEeeec
Confidence 57888998874
No 45
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=98.90 E-value=8.6e-09 Score=106.25 Aligned_cols=182 Identities=15% Similarity=0.223 Sum_probs=117.0
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHH----------HHHHHhHhcCc-ccchhhHHHHHHHhhCcc-------
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVK----------QVVKVGQGVVG-FGRNISGLFKHAISVGKR------- 213 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk----------~A~~~a~~~~~-~g~~L~~lf~~ai~v~k~------- 213 (513)
...|||+++.+.+++++++.+.+|+..+..... +-.+.|..... .|...++.|++++.++..
T Consensus 56 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~ 135 (339)
T cd08239 56 VIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPD 135 (339)
T ss_pred ceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCC
Confidence 457999999999999999999999998763211 11122222111 233346777776666542
Q ss_pred -cccccccc-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC
Q 010322 214 -VRTETNIA-AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN 291 (513)
Q Consensus 214 -Vr~et~i~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g 291 (513)
+..+.... ..+.+++++++..+ ....|++|+|+|+|.+|.++++.++..|+++|+++++++++. +++.++|
T Consensus 136 ~~~~~~aa~l~~~~~ta~~~l~~~------~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~-~~~~~~g 208 (339)
T cd08239 136 DLSFADGALLLCGIGTAYHALRRV------GVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERL-ELAKALG 208 (339)
T ss_pred CCCHHHhhhhcchHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHhC
Confidence 22222211 23555667776443 234699999999999999999999999997799999998887 6677887
Q ss_pred Ccceeecccc----hHHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 292 GVEIIYKPLS----EMLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 292 ~~~~~~~~~~----~~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
.. ..+...+ .+.+.. .++|+||+|++++..+ ...+..+. .+|..++++.
T Consensus 209 a~-~~i~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~--~~~~~~l~-----~~G~~v~~g~ 263 (339)
T cd08239 209 AD-FVINSGQDDVQEIRELTSGAGADVAIECSGNTAAR--RLALEAVR-----PWGRLVLVGE 263 (339)
T ss_pred CC-EEEcCCcchHHHHHHHhCCCCCCEEEECCCCHHHH--HHHHHHhh-----cCCEEEEEcC
Confidence 52 2222211 122222 2699999999987543 23344432 3576766664
No 46
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=98.88 E-value=5.6e-09 Score=108.35 Aligned_cols=179 Identities=12% Similarity=0.134 Sum_probs=112.6
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHH-------HHHHhHhcCcccchhhHHHHHHHhhC--------cccccc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQ-------VVKVGQGVVGFGRNISGLFKHAISVG--------KRVRTE 217 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~-------A~~~a~~~~~~g~~L~~lf~~ai~v~--------k~Vr~e 217 (513)
..|||+++.+.+++. +...+|+..+...... ..+.|......|...++.|++++.++ +.+..+
T Consensus 61 i~GhE~~G~V~~~g~--~~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~ 138 (341)
T cd08237 61 ALIHEGIGVVVSDPT--GTYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPE 138 (341)
T ss_pred eccceeEEEEEeeCC--CccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChH
Confidence 469999999999765 4788999887643211 11122222222323356666655444 344444
Q ss_pred ccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhCCccee
Q 010322 218 TNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVA-KGCTKMVVVNRSEERVAAICEELNGVEII 296 (513)
Q Consensus 218 t~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~-~G~~~V~v~nRs~~ra~~la~~~g~~~~~ 296 (513)
......|.+++++++...... ....|++|+|+|+|++|.++++.++. .|..+|++++++++|. ++++..+. .
T Consensus 139 ~aa~~~~~~~a~~a~~~~~~~---~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~-~~a~~~~~---~ 211 (341)
T cd08237 139 VAAFTELVSVGVHAISRFEQI---AHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKL-DLFSFADE---T 211 (341)
T ss_pred HhhhhchHHHHHHHHHHHhhc---CCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHH-HHHhhcCc---e
Confidence 444456888888887543221 12468999999999999999998886 6766799999998887 55655542 1
Q ss_pred ecccchHHhhcCCCcEEEEcCCCC---ccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 297 YKPLSEMLSCAADADVVFTSTASE---APLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 297 ~~~~~~~~~~l~~aDVVI~AT~s~---~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
. ..++..+. .++|+||+|+|.+ ..+ .+.++.+. ++|..+++++.
T Consensus 212 ~-~~~~~~~~-~g~d~viD~~G~~~~~~~~--~~~~~~l~-----~~G~iv~~G~~ 258 (341)
T cd08237 212 Y-LIDDIPED-LAVDHAFECVGGRGSQSAI--NQIIDYIR-----PQGTIGLMGVS 258 (341)
T ss_pred e-ehhhhhhc-cCCcEEEECCCCCccHHHH--HHHHHhCc-----CCcEEEEEeec
Confidence 1 11222222 2689999999953 222 34455443 47878888863
No 47
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=98.86 E-value=2.3e-08 Score=102.96 Aligned_cols=120 Identities=23% Similarity=0.308 Sum_probs=77.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc--
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVA-KGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA-- 321 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~-~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~-- 321 (513)
..++++|||+|.+|+..+..+.. ++.++|.|++|+++++++|++++....+.+...++.++++.++||||+||++..
T Consensus 127 ~~~~l~viGaG~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~av~~aDii~taT~s~~~~ 206 (313)
T PF02423_consen 127 DARTLGVIGAGVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEEAVRGADIIVTATPSTTPA 206 (313)
T ss_dssp T--EEEEE--SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHHHHTTSSEEEE----SSEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhhhcccCCEEEEccCCCCCC
Confidence 45799999999999999998876 689999999999999999999886422345556788899999999999999999
Q ss_pred cCCChhhhhcCCchhhhcCCcEEEEeccCC--CCCCcccccccCeEEEccCCHHHH
Q 010322 322 PLFLKDHVQDLPPVEAAVGGLRLFIDISVP--RNVGSCVADVETARVYNVDDLKEV 375 (513)
Q Consensus 322 ~vi~~~~l~~~~~~~~~~~g~~viiDlavP--rdidp~v~~l~gv~ly~iDdl~~v 375 (513)
|++..++++. |-....|+...| +.+++++.. .+.+|. |+...+
T Consensus 207 P~~~~~~l~~--------g~hi~~iGs~~~~~~El~~~~~~--~a~~~v-d~~~~~ 251 (313)
T PF02423_consen 207 PVFDAEWLKP--------GTHINAIGSYTPGMRELDDELLK--RADIVV-DSEAQA 251 (313)
T ss_dssp ESB-GGGS-T--------T-EEEE-S-SSTTBESB-HHHHH--CSEEEE-SCHHHH
T ss_pred ccccHHHcCC--------CcEEEEecCCCCchhhcCHHHhc--cCCEEE-ccHHHH
Confidence 9999888753 222344443344 356665432 345555 666543
No 48
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=98.84 E-value=1.6e-08 Score=102.67 Aligned_cols=185 Identities=17% Similarity=0.288 Sum_probs=120.7
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhc------hHHH----HHHHhHh---cCcccchhhH----------------
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILA------QVKQ----VVKVGQG---VVGFGRNISG---------------- 202 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlg------Qvk~----A~~~a~~---~~~~g~~L~~---------------- 202 (513)
...|||+.+.+.+|++|++|+.+|+..|+. |++. .-++|.. .+.-|..+++
T Consensus 57 ~vLGHEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG 136 (366)
T COG1062 57 AVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLG 136 (366)
T ss_pred eecccccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeec
Confidence 568999999999999999999999999983 4332 1122221 1111111221
Q ss_pred --HHHHHHhhCc----cccccccccC-----CCchHHHH-HHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCC
Q 010322 203 --LFKHAISVGK----RVRTETNIAA-----GAVSVSSA-AVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGC 270 (513)
Q Consensus 203 --lf~~ai~v~k----~Vr~et~i~~-----~~~Sva~~-Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~ 270 (513)
-|.++-.++. +|+.+..... -.+..++- +++-++ ..+|.+|.|+|.|.+|.++++.++..|+
T Consensus 137 ~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~------v~~G~tvaV~GlGgVGlaaI~gA~~agA 210 (366)
T COG1062 137 CSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAK------VEPGDTVAVFGLGGVGLAAIQGAKAAGA 210 (366)
T ss_pred cccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhccc------CCCCCeEEEEeccHhHHHHHHHHHHcCC
Confidence 3444433332 2222211110 12222332 233332 3479999999999999999999999999
Q ss_pred CeEEEEeCCHHHHHHHHHHhCCcceeecccch--HH----hhcC-CCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcE
Q 010322 271 TKMVVVNRSEERVAAICEELNGVEIIYKPLSE--ML----SCAA-DADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR 343 (513)
Q Consensus 271 ~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~--~~----~~l~-~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~ 343 (513)
.+|+.++.+++|. ++|++||..+ .+++.+. +. +... ++|.+|+|++....+ .+.++... ++|..
T Consensus 211 ~~IiAvD~~~~Kl-~~A~~fGAT~-~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~--~~al~~~~-----~~G~~ 281 (366)
T COG1062 211 GRIIAVDINPEKL-ELAKKFGATH-FVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVM--RQALEATH-----RGGTS 281 (366)
T ss_pred ceEEEEeCCHHHH-HHHHhcCCce-eecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHH--HHHHHHHh-----cCCeE
Confidence 9999999999998 8999999742 3444322 22 2233 899999999998754 45555432 47889
Q ss_pred EEEeccCC
Q 010322 344 LFIDISVP 351 (513)
Q Consensus 344 viiDlavP 351 (513)
++++++-|
T Consensus 282 v~iGv~~~ 289 (366)
T COG1062 282 VIIGVAGA 289 (366)
T ss_pred EEEecCCC
Confidence 99998754
No 49
>PRK07589 ornithine cyclodeaminase; Validated
Probab=98.84 E-value=2.9e-08 Score=103.27 Aligned_cols=120 Identities=18% Similarity=0.246 Sum_probs=89.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc--
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVA-KGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA-- 321 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~-~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~-- 321 (513)
..++++|||+|.+|+..++.+.. +..++|+|+||+++++++|++++....+.+...++..+++.++|||++||++..
T Consensus 128 da~~l~iiGaG~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIIvtaT~S~~~~ 207 (346)
T PRK07589 128 DSRTMALIGNGAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAEAVEGADIITTVTADKTNA 207 (346)
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCCC
Confidence 46889999999999999987765 578999999999999999998875322334445778888999999999999877
Q ss_pred cCCChhhhhcCCchhhhcCCcEEEEeccCC--CCCCcccccccCeEEEccCCHHHH
Q 010322 322 PLFLKDHVQDLPPVEAAVGGLRLFIDISVP--RNVGSCVADVETARVYNVDDLKEV 375 (513)
Q Consensus 322 ~vi~~~~l~~~~~~~~~~~g~~viiDlavP--rdidp~v~~l~gv~ly~iDdl~~v 375 (513)
|+|..++++. |-....|+--.| +++++++.. ...+| +|+...+
T Consensus 208 Pvl~~~~lkp--------G~hV~aIGs~~p~~~Eld~~~l~--~a~v~-vD~~~~~ 252 (346)
T PRK07589 208 TILTDDMVEP--------GMHINAVGGDCPGKTELHPDILR--RARVF-VEYEPQT 252 (346)
T ss_pred ceecHHHcCC--------CcEEEecCCCCCCcccCCHHHHh--cCEEE-ECCHHHH
Confidence 8888887743 333445554344 678887643 34455 4776654
No 50
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=98.84 E-value=1.5e-08 Score=103.66 Aligned_cols=166 Identities=14% Similarity=0.171 Sum_probs=106.7
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCc--------cccccccccCC
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGK--------RVRTETNIAAG 223 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~Vr~et~i~~~ 223 (513)
...|||+++.+.+++++. .+-+|+..+.... .|.. ...| ..+.|++++.++. .+..+. ....
T Consensus 60 ~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~~~-----~c~~-~~~~--~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~ 129 (308)
T TIGR01202 60 LVPGYESVGRVVEAGPDT-GFRPGDRVFVPGS-----NCYE-DVRG--LFGGASKRLVTPASRVCRLDPALGPQG-ALLA 129 (308)
T ss_pred ccCcceeEEEEEEecCCC-CCCCCCEEEEeCc-----cccc-cccc--cCCcccceEEcCHHHceeCCCCCCHHH-Hhhh
Confidence 347999999999999998 5899999876311 1211 0001 1355555554433 232222 2234
Q ss_pred CchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchH
Q 010322 224 AVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEM 303 (513)
Q Consensus 224 ~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~ 303 (513)
+.+++++++..+ ...+++|+|+|+|++|.++++.++..|++.|.+++++++|. +.+..+. .+.+ .+
T Consensus 130 ~~~~a~~~~~~~-------~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl-~~a~~~~----~i~~-~~- 195 (308)
T TIGR01202 130 LAATARHAVAGA-------EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRR-DGATGYE----VLDP-EK- 195 (308)
T ss_pred HHHHHHHHHHhc-------ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH-Hhhhhcc----ccCh-hh-
Confidence 556777776432 23578899999999999999999999998788888888776 3444332 1211 11
Q ss_pred HhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 304 LSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 304 ~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
..-.++|+||+|+|.+..+ ...++.+. ++|..++++..
T Consensus 196 -~~~~g~Dvvid~~G~~~~~--~~~~~~l~-----~~G~iv~~G~~ 233 (308)
T TIGR01202 196 -DPRRDYRAIYDASGDPSLI--DTLVRRLA-----KGGEIVLAGFY 233 (308)
T ss_pred -ccCCCCCEEEECCCCHHHH--HHHHHhhh-----cCcEEEEEeec
Confidence 1224789999999987543 34455443 46878888763
No 51
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=98.82 E-value=1.1e-08 Score=106.07 Aligned_cols=181 Identities=16% Similarity=0.228 Sum_probs=119.5
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCcccchhhHHHHHHHhhCc--------cc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVGFGRNISGLFKHAISVGK--------RV 214 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~V 214 (513)
..|||+++.+.+|++++..+.+|++.+.-.. .+-++.|...+..|...++.|++++.++. .+
T Consensus 56 i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~ 135 (347)
T PRK10309 56 TLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDM 135 (347)
T ss_pred ccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCC
Confidence 4799999999999999999999998876321 12233443333334334567776665554 23
Q ss_pred cccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcc
Q 010322 215 RTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVE 294 (513)
Q Consensus 215 r~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~ 294 (513)
..+......+.+++++++.++ ....|++|+|.|+|++|.++++.++..|++.|+++++++++. ++++++|..
T Consensus 136 s~~~aa~~~~~~~~~~~~~~~------~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~-~~~~~~Ga~- 207 (347)
T PRK10309 136 PIEDGAFIEPITVGLHAFHLA------QGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKL-ALAKSLGAM- 207 (347)
T ss_pred CHHHhhhhhHHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHHcCCc-
Confidence 333333334666667765432 234689999999999999999999999998788899999887 466778742
Q ss_pred eeeccc----chHHhhc--CCCc-EEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 295 IIYKPL----SEMLSCA--ADAD-VVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 295 ~~~~~~----~~~~~~l--~~aD-VVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
..+... +.+.+.. .++| +||+|+|.+..+ ...++.+. ++|..++++.
T Consensus 208 ~~i~~~~~~~~~~~~~~~~~~~d~~v~d~~G~~~~~--~~~~~~l~-----~~G~iv~~G~ 261 (347)
T PRK10309 208 QTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTV--ELAIEIAG-----PRAQLALVGT 261 (347)
T ss_pred eEecCcccCHHHHHHHhcCCCCCeEEEECCCCHHHH--HHHHHHhh-----cCCEEEEEcc
Confidence 122211 1122222 2567 999999986543 34455443 4777888775
No 52
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=98.78 E-value=1.4e-08 Score=106.20 Aligned_cols=182 Identities=12% Similarity=0.153 Sum_probs=112.8
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH-----------HHHHHHhHhcCcc-------cchhhHHHHHHHhhCcc-
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV-----------KQVVKVGQGVVGF-------GRNISGLFKHAISVGKR- 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv-----------k~A~~~a~~~~~~-------g~~L~~lf~~ai~v~k~- 213 (513)
..|||+++.+.+|+++++++.+|++.+.... .+.++.|...... |...++.|.+++.++..
T Consensus 69 i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~ 148 (360)
T PLN02586 69 VPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHF 148 (360)
T ss_pred cCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHH
Confidence 5799999999999999999999999974211 1223344332211 22236778887766652
Q ss_pred ---cccccccc-CCCchHH----HHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 010322 214 ---VRTETNIA-AGAVSVS----SAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAA 285 (513)
Q Consensus 214 ---Vr~et~i~-~~~~Sva----~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~ 285 (513)
++...... ..+++++ ++++.... ....|++|+|.|+|++|.++++.++..|++ |++++.+.++...
T Consensus 149 ~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~-----~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-vi~~~~~~~~~~~ 222 (360)
T PLN02586 149 VLRFPDNLPLDAGAPLLCAGITVYSPMKYYG-----MTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISSSSNKEDE 222 (360)
T ss_pred eeeCCCCCCHHHhhhhhcchHHHHHHHHHhc-----ccCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCcchhhh
Confidence 22211110 1123332 33332211 123689999999999999999999999985 7777777666667
Q ss_pred HHHHhCCcceeeccc--chHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 286 ICEELNGVEIIYKPL--SEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 286 la~~~g~~~~~~~~~--~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
+++++|.. ..+... +.+.+...++|+||+|++++..+ .+.++.+. ++|..+.++.
T Consensus 223 ~~~~~Ga~-~vi~~~~~~~~~~~~~~~D~vid~~g~~~~~--~~~~~~l~-----~~G~iv~vG~ 279 (360)
T PLN02586 223 AINRLGAD-SFLVSTDPEKMKAAIGTMDYIIDTVSAVHAL--GPLLGLLK-----VNGKLITLGL 279 (360)
T ss_pred HHHhCCCc-EEEcCCCHHHHHhhcCCCCEEEECCCCHHHH--HHHHHHhc-----CCcEEEEeCC
Confidence 77778752 222221 12333344689999999976543 33455443 4677777764
No 53
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=98.77 E-value=2.2e-08 Score=104.11 Aligned_cols=180 Identities=19% Similarity=0.295 Sum_probs=114.7
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCcccchhhHHHHHHHhhCcc----cccc-
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVGFGRNISGLFKHAISVGKR----VRTE- 217 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~~g~~L~~lf~~ai~v~k~----Vr~e- 217 (513)
..|||+++.+.+|+++++.. +|+..+.... ..-++.|......|...++.|++++.++.. ++..
T Consensus 56 i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~ 134 (349)
T TIGR03201 56 ALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEAR 134 (349)
T ss_pred eccccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCccc
Confidence 46999999999999999876 9998875321 112334444334444456888888777652 2220
Q ss_pred ---cccc-------CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Q 010322 218 ---TNIA-------AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIC 287 (513)
Q Consensus 218 ---t~i~-------~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la 287 (513)
..++ ..+..+++.++..+ ....|.+|+|+|+|++|.++++.++..|+ +|+++++++++. +++
T Consensus 135 ~~~~~~~~~~~a~~~~~~~ta~~a~~~~------~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~-~~~ 206 (349)
T TIGR03201 135 LAAAGLPLEHVSVVADAVTTPYQAAVQA------GLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKL-EMM 206 (349)
T ss_pred ccccCCCHHHhhhhcchHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHH-HHH
Confidence 0111 12334445554321 23468999999999999999999999999 489999999988 567
Q ss_pred HHhCCcceeecccc----hHHhhc------CCCc----EEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 288 EELNGVEIIYKPLS----EMLSCA------ADAD----VVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 288 ~~~g~~~~~~~~~~----~~~~~l------~~aD----VVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
+++|.. ..+...+ ++.+.+ .++| +||+|++++..+ ...++.+. ++|..++++..
T Consensus 207 ~~~Ga~-~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~--~~~~~~l~-----~~G~iv~~G~~ 274 (349)
T TIGR03201 207 KGFGAD-LTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQ--ESALSLLS-----HGGTLVVVGYT 274 (349)
T ss_pred HHhCCc-eEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHH--HHHHHHHh-----cCCeEEEECcC
Confidence 788752 2222211 222211 2454 899999987543 33444432 46777777753
No 54
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=98.72 E-value=6.5e-08 Score=101.97 Aligned_cols=183 Identities=16% Similarity=0.186 Sum_probs=112.8
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhch-------H----HHHHHHhHhcCc-------ccchhhHHHHHHHhhCcc-
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQ-------V----KQVVKVGQGVVG-------FGRNISGLFKHAISVGKR- 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQ-------v----k~A~~~a~~~~~-------~g~~L~~lf~~ai~v~k~- 213 (513)
..|||+++.+.+|+++++.+.+|++.+... + .+-++.|..... .|...++.|++++.++..
T Consensus 63 i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~ 142 (375)
T PLN02178 63 IPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRF 142 (375)
T ss_pred ccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHH
Confidence 479999999999999999999999987421 1 123344443221 122236778887766652
Q ss_pred ---cccccccc-CCCchH----HHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 010322 214 ---VRTETNIA-AGAVSV----SSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAA 285 (513)
Q Consensus 214 ---Vr~et~i~-~~~~Sv----a~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~ 285 (513)
++...... ..++.+ +++++..... ....|++|+|.|+|++|.++++.++..|++ |++++++.++..+
T Consensus 143 ~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~----~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-Vi~~~~~~~~~~~ 217 (375)
T PLN02178 143 VLSIPDGLPSDSGAPLLCAGITVYSPMKYYGM----TKESGKRLGVNGLGGLGHIAVKIGKAFGLR-VTVISRSSEKERE 217 (375)
T ss_pred eEECCCCCCHHHcchhhccchHHHHHHHHhCC----CCCCCCEEEEEcccHHHHHHHHHHHHcCCe-EEEEeCChHHhHH
Confidence 22211110 012222 3344322210 113689999999999999999999999995 8888877665457
Q ss_pred HHHHhCCcceeeccc--chHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 286 ICEELNGVEIIYKPL--SEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 286 la~~~g~~~~~~~~~--~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
+++++|.. ..+... +.+.+...++|+||+|++.+..+ ...++.+. ++|..+.+++
T Consensus 218 ~a~~lGa~-~~i~~~~~~~v~~~~~~~D~vid~~G~~~~~--~~~~~~l~-----~~G~iv~vG~ 274 (375)
T PLN02178 218 AIDRLGAD-SFLVTTDSQKMKEAVGTMDFIIDTVSAEHAL--LPLFSLLK-----VSGKLVALGL 274 (375)
T ss_pred HHHhCCCc-EEEcCcCHHHHHHhhCCCcEEEECCCcHHHH--HHHHHhhc-----CCCEEEEEcc
Confidence 77778752 222221 12333335789999999876443 34454443 4677777765
No 55
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=98.70 E-value=4.4e-08 Score=101.25 Aligned_cols=178 Identities=15% Similarity=0.117 Sum_probs=119.1
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchH-----------HHHHHHhHhcCcccchhhHHHHHHHhhCcc----ccc
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQV-----------KQVVKVGQGVVGFGRNISGLFKHAISVGKR----VRT 216 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQv-----------k~A~~~a~~~~~~g~~L~~lf~~ai~v~k~----Vr~ 216 (513)
...|||+++.+.+++++++.+.+|++.+.... ...++.|......|...++.|++++.++.. ++.
T Consensus 58 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~ 137 (329)
T TIGR02822 58 VTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPT 137 (329)
T ss_pred ccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCC
Confidence 35799999999999999999999999974211 123445555444554456778877766652 222
Q ss_pred cccc-----cCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC
Q 010322 217 ETNI-----AAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN 291 (513)
Q Consensus 217 et~i-----~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g 291 (513)
.... ...+..++++++..+ ....|.+|+|.|+|++|.++++.++..|++ |+++.++++|. ++++++|
T Consensus 138 ~~~~~~aa~l~~~~~ta~~~~~~~------~~~~g~~VlV~G~g~iG~~a~~~a~~~G~~-vi~~~~~~~~~-~~a~~~G 209 (329)
T TIGR02822 138 GYDDVELAPLLCAGIIGYRALLRA------SLPPGGRLGLYGFGGSAHLTAQVALAQGAT-VHVMTRGAAAR-RLALALG 209 (329)
T ss_pred CCCHHHhHHHhccchHHHHHHHhc------CCCCCCEEEEEcCCHHHHHHHHHHHHCCCe-EEEEeCChHHH-HHHHHhC
Confidence 2111 112334456665432 234689999999999999999999999995 88899998886 7888898
Q ss_pred CcceeecccchHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 292 GVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 292 ~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
.. ..+...+. . -...|+++.+++.+..+ ...++.+. ++|..++++.
T Consensus 210 a~-~vi~~~~~-~--~~~~d~~i~~~~~~~~~--~~~~~~l~-----~~G~~v~~G~ 255 (329)
T TIGR02822 210 AA-SAGGAYDT-P--PEPLDAAILFAPAGGLV--PPALEALD-----RGGVLAVAGI 255 (329)
T ss_pred Cc-eecccccc-C--cccceEEEECCCcHHHH--HHHHHhhC-----CCcEEEEEec
Confidence 53 22221111 1 13689999998887543 34555543 4787888876
No 56
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=98.66 E-value=9.4e-08 Score=100.23 Aligned_cols=182 Identities=15% Similarity=0.200 Sum_probs=111.8
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCc---ccc--------h----------h
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVG---FGR--------N----------I 200 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~---~g~--------~----------L 200 (513)
...|||+++.+.+|+++++.+.+|++...... .+.++.|..... .|. . -
T Consensus 57 ~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 136 (368)
T TIGR02818 57 VILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMG 136 (368)
T ss_pred eeeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCccccccc
Confidence 35799999999999999999999998875321 111223322110 000 0 0
Q ss_pred hHHHHHHHhhCcc----cc----cccccc-CCCchHHHHHHH-HHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCC
Q 010322 201 SGLFKHAISVGKR----VR----TETNIA-AGAVSVSSAAVE-LALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGC 270 (513)
Q Consensus 201 ~~lf~~ai~v~k~----Vr----~et~i~-~~~~Sva~~Av~-la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~ 270 (513)
++.|++++.++.. ++ .+.... ..+..++++++. .+ ....|++|+|+|+|++|.++++.++..|+
T Consensus 137 ~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~------~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~ 210 (368)
T TIGR02818 137 CSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTA------KVEEGDTVAVFGLGGIGLSVIQGARMAKA 210 (368)
T ss_pred CccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 2467776666542 22 211111 123344555532 22 23468999999999999999999999999
Q ss_pred CeEEEEeCCHHHHHHHHHHhCCcceeeccc---chHH----hhc-CCCcEEEEcCCCCccCCChhhhhcCCchhhhcC-C
Q 010322 271 TKMVVVNRSEERVAAICEELNGVEIIYKPL---SEML----SCA-ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVG-G 341 (513)
Q Consensus 271 ~~V~v~nRs~~ra~~la~~~g~~~~~~~~~---~~~~----~~l-~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~-g 341 (513)
.+|+++++++++. ++++++|.. ..+... .+.. +.. .++|+||+|++.+..+ .+.++.+. ++ |
T Consensus 211 ~~Vi~~~~~~~~~-~~a~~~Ga~-~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~--~~~~~~~~-----~~~G 281 (368)
T TIGR02818 211 SRIIAIDINPAKF-ELAKKLGAT-DCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVM--RAALECCH-----KGWG 281 (368)
T ss_pred CeEEEEcCCHHHH-HHHHHhCCC-eEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHH--HHHHHHhh-----cCCC
Confidence 7799999999887 677888752 222211 1111 111 2699999999976543 34454432 23 6
Q ss_pred cEEEEec
Q 010322 342 LRLFIDI 348 (513)
Q Consensus 342 ~~viiDl 348 (513)
..+++++
T Consensus 282 ~~v~~g~ 288 (368)
T TIGR02818 282 ESIIIGV 288 (368)
T ss_pred eEEEEec
Confidence 6777775
No 57
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=98.65 E-value=6e-08 Score=101.71 Aligned_cols=183 Identities=20% Similarity=0.249 Sum_probs=112.1
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCc---ccchh------------------h
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVG---FGRNI------------------S 201 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~---~g~~L------------------~ 201 (513)
..|||+++.+.+|++++....+|++...... .+.++.|..... .|..+ .
T Consensus 64 i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~ 143 (371)
T cd08281 64 ALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGV 143 (371)
T ss_pred cCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCc
Confidence 4799999999999999999999999875321 112233332211 01100 2
Q ss_pred HHHHHHHhhCcc----ccc----cccccC-CCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCe
Q 010322 202 GLFKHAISVGKR----VRT----ETNIAA-GAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTK 272 (513)
Q Consensus 202 ~lf~~ai~v~k~----Vr~----et~i~~-~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~ 272 (513)
+.|++++.++.. ++. +..... .+..+++.++. ... ....|++|+|.|+|++|.++++.++..|+++
T Consensus 144 G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~---~~~--~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~ 218 (371)
T cd08281 144 SAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVV---NTA--GVRPGQSVAVVGLGGVGLSALLGAVAAGASQ 218 (371)
T ss_pred ccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHH---hcc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 567777766542 222 221111 12233333321 111 2346899999999999999999999999977
Q ss_pred EEEEeCCHHHHHHHHHHhCCcceeecccc-hH----Hhhc-CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEE
Q 010322 273 MVVVNRSEERVAAICEELNGVEIIYKPLS-EM----LSCA-ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFI 346 (513)
Q Consensus 273 V~v~nRs~~ra~~la~~~g~~~~~~~~~~-~~----~~~l-~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~vii 346 (513)
|++++++++|. ++++++|.. ..+...+ +. .+.. .++|+||+|++.+..+ ...++.+. ++|..+.+
T Consensus 219 Vi~~~~~~~r~-~~a~~~Ga~-~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~--~~~~~~l~-----~~G~iv~~ 289 (371)
T cd08281 219 VVAVDLNEDKL-ALARELGAT-ATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPAL--ETAYEITR-----RGGTTVTA 289 (371)
T ss_pred EEEEcCCHHHH-HHHHHcCCc-eEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHH--HHHHHHHh-----cCCEEEEE
Confidence 99999999887 677888752 2222211 21 1111 2689999999876543 33444432 46777777
Q ss_pred ecc
Q 010322 347 DIS 349 (513)
Q Consensus 347 Dla 349 (513)
+..
T Consensus 290 G~~ 292 (371)
T cd08281 290 GLP 292 (371)
T ss_pred ccC
Confidence 753
No 58
>PRK06046 alanine dehydrogenase; Validated
Probab=98.64 E-value=2.9e-07 Score=95.38 Aligned_cols=120 Identities=18% Similarity=0.292 Sum_probs=86.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhCCc-ceeecccchHHhhcCCCcEEEEcCCCCcc
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVA-KGCTKMVVVNRSEERVAAICEELNGV-EIIYKPLSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~-~G~~~V~v~nRs~~ra~~la~~~g~~-~~~~~~~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
..++++|||+|.+|+.++..+.. .+++.|.++||++++++++++++... ...+...++..+.+. +|+|++||++..|
T Consensus 128 ~~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-aDiVv~aTps~~P 206 (326)
T PRK06046 128 DSKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACD-CDILVTTTPSRKP 206 (326)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhh-CCEEEEecCCCCc
Confidence 46789999999999999998874 58899999999999999998876421 112333456666676 9999999999999
Q ss_pred CCChhhhhcCCchhhhcCCcEEEEeccCC--CCCCcccccccCeEEEccCCHHHHH
Q 010322 323 LFLKDHVQDLPPVEAAVGGLRLFIDISVP--RNVGSCVADVETARVYNVDDLKEVV 376 (513)
Q Consensus 323 vi~~~~l~~~~~~~~~~~g~~viiDlavP--rdidp~v~~l~gv~ly~iDdl~~v~ 376 (513)
+|..++++. |.....|+...| +++++++.. ...+ -+||+..+.
T Consensus 207 ~~~~~~l~~--------g~hV~~iGs~~p~~~El~~~~~~--~a~v-vvD~~~~~~ 251 (326)
T PRK06046 207 VVKAEWIKE--------GTHINAIGADAPGKQELDPEILL--RAKV-VVDDMEQAL 251 (326)
T ss_pred EecHHHcCC--------CCEEEecCCCCCccccCCHHHHh--CCcE-EECCHHHHH
Confidence 998887743 232334443344 577776533 2333 358887754
No 59
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.63 E-value=7.3e-07 Score=96.80 Aligned_cols=143 Identities=19% Similarity=0.267 Sum_probs=98.1
Q ss_pred HHHHHHHHHHhhCCC---------CCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceee
Q 010322 227 VSSAAVELALMKLPE---------SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIY 297 (513)
Q Consensus 227 va~~Av~la~~~~~~---------~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~ 297 (513)
-||.||-.|...++. +..++.+|+|+|+|.+|..++..++..|+. |++++++.++. +.++.+|...+.+
T Consensus 136 AGy~Avi~Aa~~lgr~~~g~~taag~vp~akVlViGaG~iGl~Aa~~ak~lGA~-V~v~d~~~~rl-e~a~~lGa~~v~v 213 (511)
T TIGR00561 136 AGYRAIIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVAGLAAIGAANSLGAI-VRAFDTRPEVK-EQVQSMGAEFLEL 213 (511)
T ss_pred HHHHHHHHHHHHhhhhcCCceecCCCCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHHHH-HHHHHcCCeEEec
Confidence 356666555444421 335678999999999999999999999986 99999999887 5677777521122
Q ss_pred ccc--------------ch--------HHhhcCCCcEEEEcC---CCCcc-CCChhhhhcCCchhhhcCCcEEEEeccCC
Q 010322 298 KPL--------------SE--------MLSCAADADVVFTST---ASEAP-LFLKDHVQDLPPVEAAVGGLRLFIDISVP 351 (513)
Q Consensus 298 ~~~--------------~~--------~~~~l~~aDVVI~AT---~s~~~-vi~~~~l~~~~~~~~~~~g~~viiDlavP 351 (513)
... ++ ..+.+.++|+||+|. +.+.| ++++++++.+. + | -++||++..
T Consensus 214 ~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MK-----p-G-svIVDlA~d 286 (511)
T TIGR00561 214 DFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMK-----A-G-SVIVDLAAE 286 (511)
T ss_pred cccccccccccceeecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCC-----C-C-CEEEEeeeC
Confidence 110 01 334467899999999 65555 67888887764 2 3 679999864
Q ss_pred C--CCCcc-----cccccCeEEEccCCHHHHHHH
Q 010322 352 R--NVGSC-----VADVETARVYNVDDLKEVVAA 378 (513)
Q Consensus 352 r--didp~-----v~~l~gv~ly~iDdl~~v~~~ 378 (513)
. |++.. +..-.|+.+|.++++...+..
T Consensus 287 ~GGn~E~t~p~~~~~~~~GV~~~gv~nlPs~~p~ 320 (511)
T TIGR00561 287 QGGNCEYTKPGEVYTTENQVKVIGYTDLPSRLPT 320 (511)
T ss_pred CCCCEEEecCceEEEecCCEEEEeeCCccccCHH
Confidence 3 44322 112247999999999876544
No 60
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=98.62 E-value=6.2e-07 Score=88.19 Aligned_cols=187 Identities=20% Similarity=0.203 Sum_probs=120.8
Q ss_pred ccccCCCchHHHHHHHHHHh---hCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHH-----HHHHHH
Q 010322 218 TNIAAGAVSVSSAAVELALM---KLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEER-----VAAICE 288 (513)
Q Consensus 218 t~i~~~~~Sva~~Av~la~~---~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~r-----a~~la~ 288 (513)
+....+..-.+|+|.....+ .++ .+++..+|.|+|+ |.+|..++++|..++.. +.+..|..++ ...+.+
T Consensus 137 ~~~ttgns~Tayaa~r~Vl~~~~~lG-idlsqatvaivGa~G~Ia~~Iar~la~~~~~-~~ll~r~aea~~rq~l~~l~e 214 (351)
T COG5322 137 TRFTTGNSHTAYAACRQVLKHFAQLG-IDLSQATVAIVGATGDIASAIARWLAPKVGV-KELLLRDAEARNRQRLTLLQE 214 (351)
T ss_pred EecccCCccchHHHHHHHHHHHHHhC-cCHHHCeEEEecCCchHHHHHHHHhccccCE-EEEecccHHhhhhhhhhhccc
Confidence 34445555566776654333 334 5788999999999 99999999999998775 6666765443 333333
Q ss_pred HhCCcceeecccchHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCCcccccccCeEEEc
Q 010322 289 ELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYN 368 (513)
Q Consensus 289 ~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~l~gv~ly~ 368 (513)
+++. + .+.+. -.+.....++|..|+..+.+.|.++.+++ +.++||-+.|+|+++.+.+.+|+++++
T Consensus 215 ~~~~-~-~i~s~--d~~~~~e~i~v~vAs~~~g~~I~pq~lkp----------g~~ivD~g~P~dvd~~vk~~~~V~Ii~ 280 (351)
T COG5322 215 ELGR-G-KIMSL--DYALPQEDILVWVASMPKGVEIFPQHLKP----------GCLIVDGGYPKDVDTSVKNVGGVRIIP 280 (351)
T ss_pred ccCC-C-eeeec--cccccccceEEEEeecCCCceechhhccC----------CeEEEcCCcCcccccccccCCCeEEec
Confidence 3332 1 11111 12334567888999999999888877642 389999999999999999888888876
Q ss_pred ------cCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Q 010322 369 ------VDD--LKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPTIKKLRAYAERIRV 426 (513)
Q Consensus 369 ------iDd--l~~v~~~~~~~R~~~~~~ae~iI~e~~~~f~~w~~~~~~~p~I~~lr~~~e~i~~ 426 (513)
.-| |.-...-+...|.--+.-||.||-+ |+.|....+..+ +-+-++++.|-+
T Consensus 281 GGlV~~s~~it~gi~~~~~~p~~~l~aClAEtlil~----~eg~~~~fS~Gr--q~~~dk~~~ig~ 340 (351)
T COG5322 281 GGLVEHSLDITWGIMKIVGMPVRQLFACLAETLILE----FEGEHTNFSWGR--QILVDKMEFIGD 340 (351)
T ss_pred CccccCccccchhHHHHcccchhhHHHHHHHHHHHH----hcchhhhccccc--cccHHHHHHHHH
Confidence 112 2222222223455556667777665 788887776665 333355555443
No 61
>PLN02740 Alcohol dehydrogenase-like
Probab=98.61 E-value=1.3e-07 Score=99.63 Aligned_cols=181 Identities=17% Similarity=0.208 Sum_probs=113.2
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCccc------------------------c
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVGFG------------------------R 198 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~~g------------------------~ 198 (513)
..|||+++.+.+|++++.++.+|++++.... .+-++.|.+....+ .
T Consensus 68 i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 147 (381)
T PLN02740 68 ILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHF 147 (381)
T ss_pred cccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCccccc
Confidence 5799999999999999999999999876321 11223333321100 0
Q ss_pred hhhHHHHHHHhhCcc----cccc----ccc-cCCCchHHHHHH-HHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHc
Q 010322 199 NISGLFKHAISVGKR----VRTE----TNI-AAGAVSVSSAAV-ELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAK 268 (513)
Q Consensus 199 ~L~~lf~~ai~v~k~----Vr~e----t~i-~~~~~Sva~~Av-~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~ 268 (513)
..++.|++++.++.. ++.+ ... ...+...+++++ +.+ ....|++|+|+|+|++|.++++.++..
T Consensus 148 ~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~------~~~~g~~VlV~G~G~vG~~a~q~ak~~ 221 (381)
T PLN02740 148 LNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTA------NVQAGSSVAIFGLGAVGLAVAEGARAR 221 (381)
T ss_pred ccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhcc------CCCCCCEEEEECCCHHHHHHHHHHHHC
Confidence 124678777766542 2221 111 112334445443 222 234789999999999999999999999
Q ss_pred CCCeEEEEeCCHHHHHHHHHHhCCcceeecccc---hHHh----hc-CCCcEEEEcCCCCccCCChhhhhcCCchhhhcC
Q 010322 269 GCTKMVVVNRSEERVAAICEELNGVEIIYKPLS---EMLS----CA-ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVG 340 (513)
Q Consensus 269 G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~---~~~~----~l-~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~ 340 (513)
|+.+|++++++++|. ++++++|.. ..+...+ +..+ .. .++|+||+|++.+..+ ...+..+. ++
T Consensus 222 G~~~Vi~~~~~~~r~-~~a~~~Ga~-~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~--~~a~~~~~-----~g 292 (381)
T PLN02740 222 GASKIIGVDINPEKF-EKGKEMGIT-DFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVL--REAFLSTH-----DG 292 (381)
T ss_pred CCCcEEEEcCChHHH-HHHHHcCCc-EEEecccccchHHHHHHHHhCCCCCEEEECCCChHHH--HHHHHhhh-----cC
Confidence 997799999999887 667788752 2222111 1222 11 2699999999987544 34444432 33
Q ss_pred -CcEEEEec
Q 010322 341 -GLRLFIDI 348 (513)
Q Consensus 341 -g~~viiDl 348 (513)
|..++++.
T Consensus 293 ~G~~v~~G~ 301 (381)
T PLN02740 293 WGLTVLLGI 301 (381)
T ss_pred CCEEEEEcc
Confidence 66777765
No 62
>PLN02827 Alcohol dehydrogenase-like
Probab=98.61 E-value=1.5e-07 Score=99.22 Aligned_cols=182 Identities=13% Similarity=0.177 Sum_probs=110.8
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCc----------------ccc-----hhh
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVG----------------FGR-----NIS 201 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~----------------~g~-----~L~ 201 (513)
..|||+++.+.+|++++..+.+|++.+.... .+.++.|...+. .|. ..+
T Consensus 66 i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 145 (378)
T PLN02827 66 IFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAV 145 (378)
T ss_pred eecccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCccccccccc
Confidence 4699999999999999999999998876431 112233332211 000 012
Q ss_pred HHHHHHHhhCcc----ccccccc-cCCCc----hHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCe
Q 010322 202 GLFKHAISVGKR----VRTETNI-AAGAV----SVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTK 272 (513)
Q Consensus 202 ~lf~~ai~v~k~----Vr~et~i-~~~~~----Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~ 272 (513)
+.|++++.++.. ++..... ...++ ..++.++. ... ....|.+|+|+|+|++|.++++.++..|+..
T Consensus 146 G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~---~~~--~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~ 220 (378)
T PLN02827 146 SSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAW---NVA--DVSKGSSVVIFGLGTVGLSVAQGAKLRGASQ 220 (378)
T ss_pred ccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHH---hhc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence 567777666542 2211110 01112 22333221 111 2346999999999999999999999999977
Q ss_pred EEEEeCCHHHHHHHHHHhCCcceeecccc---hHHh----hc-CCCcEEEEcCCCCccCCChhhhhcCCchhhhcC-CcE
Q 010322 273 MVVVNRSEERVAAICEELNGVEIIYKPLS---EMLS----CA-ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVG-GLR 343 (513)
Q Consensus 273 V~v~nRs~~ra~~la~~~g~~~~~~~~~~---~~~~----~l-~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~-g~~ 343 (513)
|+++++++++. ++++++|.. ..+...+ +..+ .. .++|+||+|+|.+..+ ...++.+. ++ |..
T Consensus 221 vi~~~~~~~~~-~~a~~lGa~-~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~--~~~l~~l~-----~g~G~i 291 (378)
T PLN02827 221 IIGVDINPEKA-EKAKTFGVT-DFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIA--TTALQSCS-----DGWGLT 291 (378)
T ss_pred EEEECCCHHHH-HHHHHcCCc-EEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHH--HHHHHhhc-----cCCCEE
Confidence 88889898887 677888752 2222111 2222 11 2699999999986544 34555443 35 667
Q ss_pred EEEec
Q 010322 344 LFIDI 348 (513)
Q Consensus 344 viiDl 348 (513)
+++++
T Consensus 292 v~~G~ 296 (378)
T PLN02827 292 VTLGV 296 (378)
T ss_pred EEECC
Confidence 77765
No 63
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.61 E-value=1.2e-07 Score=100.65 Aligned_cols=81 Identities=16% Similarity=0.224 Sum_probs=63.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCcc
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
.+.|++|+|+|+|++|+.+++.++..|+ +|+++++++.|+ ..|..+|. ...+. .+.+.++|+||+||+.+.
T Consensus 199 ~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~-~~A~~~G~---~~~~~---~e~v~~aDVVI~atG~~~- 269 (413)
T cd00401 199 MIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICA-LQAAMEGY---EVMTM---EEAVKEGDIFVTTTGNKD- 269 (413)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhH-HHHHhcCC---EEccH---HHHHcCCCEEEECCCCHH-
Confidence 4689999999999999999999999999 599999999887 66777764 22222 355678999999999875
Q ss_pred CCChhhhhcC
Q 010322 323 LFLKDHVQDL 332 (513)
Q Consensus 323 vi~~~~l~~~ 332 (513)
+++.+.+..+
T Consensus 270 ~i~~~~l~~m 279 (413)
T cd00401 270 IITGEHFEQM 279 (413)
T ss_pred HHHHHHHhcC
Confidence 4454456654
No 64
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=98.60 E-value=2.8e-07 Score=95.05 Aligned_cols=122 Identities=21% Similarity=0.247 Sum_probs=90.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhCCc-ceeecccchHHhhcCCCcEEEEcCCCCcc
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVA-KGCTKMVVVNRSEERVAAICEELNGV-EIIYKPLSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~-~G~~~V~v~nRs~~ra~~la~~~g~~-~~~~~~~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
....++|||+|.+++..++++.. .++.+|.|++|+++.+++++..+... ...+.+.++..+++.++|+||+||++..|
T Consensus 129 da~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~P 208 (330)
T COG2423 129 DASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEP 208 (330)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCC
Confidence 46789999999999999999987 58899999999999999998776432 11244567788889999999999999999
Q ss_pred CCChhhhhcCCchhhhcCCcEEEEeccCC--CCCCcccccccCeEEEccCCHHHHH
Q 010322 323 LFLKDHVQDLPPVEAAVGGLRLFIDISVP--RNVGSCVADVETARVYNVDDLKEVV 376 (513)
Q Consensus 323 vi~~~~l~~~~~~~~~~~g~~viiDlavP--rdidp~v~~l~gv~ly~iDdl~~v~ 376 (513)
++..+++++. -.+..++---| +.++|++... ...|-+|++.+..
T Consensus 209 il~~~~l~~G--------~hI~aiGad~p~k~Eld~e~l~r--a~~vvvD~~~q~~ 254 (330)
T COG2423 209 VLKAEWLKPG--------THINAIGADAPGKRELDPEVLAR--ADRVVVDSLEQTR 254 (330)
T ss_pred eecHhhcCCC--------cEEEecCCCCcccccCCHHHHHh--cCeEEEcCHHHhh
Confidence 9999988642 22333331123 4677776432 3255678887753
No 65
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=98.55 E-value=1.2e-06 Score=95.46 Aligned_cols=139 Identities=20% Similarity=0.240 Sum_probs=93.4
Q ss_pred HHHHHHHHHHhhCCC---------CCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceee
Q 010322 227 VSSAAVELALMKLPE---------SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIY 297 (513)
Q Consensus 227 va~~Av~la~~~~~~---------~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~ 297 (513)
.||.||-.|...++. +..++.+|+|+|+|++|..++..++..|+ +|+++|+++++. +.++.+|.....+
T Consensus 137 AGy~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rl-e~aeslGA~~v~i 214 (509)
T PRK09424 137 AGYRAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVA-EQVESMGAEFLEL 214 (509)
T ss_pred hHHHHHHHHHHHhcccCCCceeccCCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHcCCeEEEe
Confidence 467777666554431 24579999999999999999999999999 699999999988 6788888531222
Q ss_pred cccc--------------h--------HHhhcCCCcEEEEcCCCCc---c-CCChhhhhcCCchhhhcCCcEEEEeccCC
Q 010322 298 KPLS--------------E--------MLSCAADADVVFTSTASEA---P-LFLKDHVQDLPPVEAAVGGLRLFIDISVP 351 (513)
Q Consensus 298 ~~~~--------------~--------~~~~l~~aDVVI~AT~s~~---~-vi~~~~l~~~~~~~~~~~g~~viiDlavP 351 (513)
.+.+ + +.+.+.++|+||+|++.|. | ++++++++.+. +++ +++|++++
T Consensus 215 ~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mk-----pGg--vIVdvg~~ 287 (509)
T PRK09424 215 DFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMK-----PGS--VIVDLAAE 287 (509)
T ss_pred ccccccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcC-----CCC--EEEEEccC
Confidence 2211 1 0122357999999999854 4 44678887764 344 57777764
Q ss_pred --CCCCcc-----cccccCeEEEccCCHHH
Q 010322 352 --RNVGSC-----VADVETARVYNVDDLKE 374 (513)
Q Consensus 352 --rdidp~-----v~~l~gv~ly~iDdl~~ 374 (513)
.+++.. +....++.+|..+++..
T Consensus 288 ~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~ 317 (509)
T PRK09424 288 NGGNCELTVPGEVVVTDNGVTIIGYTDLPS 317 (509)
T ss_pred CCCCcccccCccceEeECCEEEEEeCCCch
Confidence 232211 11125777887766553
No 66
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=98.54 E-value=7.4e-07 Score=92.39 Aligned_cols=182 Identities=23% Similarity=0.347 Sum_probs=112.4
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCcccch-hhHHHHHHHhh--------Cc
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVGFGRN-ISGLFKHAISV--------GK 212 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~~g~~-L~~lf~~ai~v--------~k 212 (513)
...|+|+++.+.+|+.++....+|+.....+. ...+..|...+.+|.. .++.|++++.+ ++
T Consensus 66 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~ 145 (351)
T cd08233 66 VTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPD 145 (351)
T ss_pred ceecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcC
Confidence 35799999999999999999999998875321 1112222222222210 13445444433 33
Q ss_pred cccccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC
Q 010322 213 RVRTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG 292 (513)
Q Consensus 213 ~Vr~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~ 292 (513)
.+..+......+.++++.++..+ ....|.+|+|.|+|.+|.++++.++..|+++|++++++.++. +++.++|.
T Consensus 146 ~~~~~~aa~~~~~~ta~~~l~~~------~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~-~~~~~~ga 218 (351)
T cd08233 146 NVPLEEAALVEPLAVAWHAVRRS------GFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARR-ELAEELGA 218 (351)
T ss_pred CCCHHHhhhccHHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHhCC
Confidence 33333332234666677776432 234689999999999999999999999997799999998887 55666764
Q ss_pred cceeecccc-h----HHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 293 VEIIYKPLS-E----MLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 293 ~~~~~~~~~-~----~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
. ..+...+ + +.+.. .++|+||+|++.+..+ ...++.+. .+|..+.++.
T Consensus 219 ~-~~i~~~~~~~~~~l~~~~~~~~~d~vid~~g~~~~~--~~~~~~l~-----~~G~~v~~g~ 273 (351)
T cd08233 219 T-IVLDPTEVDVVAEVRKLTGGGGVDVSFDCAGVQATL--DTAIDALR-----PRGTAVNVAI 273 (351)
T ss_pred C-EEECCCccCHHHHHHHHhCCCCCCEEEECCCCHHHH--HHHHHhcc-----CCCEEEEEcc
Confidence 2 2222111 1 22222 2599999999875443 33444432 3566666654
No 67
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=98.52 E-value=3.6e-07 Score=95.68 Aligned_cols=181 Identities=15% Similarity=0.234 Sum_probs=109.6
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH------H----HHHHHhHhcCc---ccc------------------hhh
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV------K----QVVKVGQGVVG---FGR------------------NIS 201 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv------k----~A~~~a~~~~~---~g~------------------~L~ 201 (513)
..|||+++.+.+|+++++.+.+|+....... . +-.+.|...+. .|. .-.
T Consensus 59 v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~ 138 (368)
T cd08300 59 ILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGT 138 (368)
T ss_pred eeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCccccccccc
Confidence 4799999999999999999999998875311 0 01122221110 000 012
Q ss_pred HHHHHHHhhCcc--------cccccccc-CCCchHHHHHH-HHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCC
Q 010322 202 GLFKHAISVGKR--------VRTETNIA-AGAVSVSSAAV-ELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCT 271 (513)
Q Consensus 202 ~lf~~ai~v~k~--------Vr~et~i~-~~~~Sva~~Av-~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~ 271 (513)
+.|++++.++.. +..+.... ..+..+++.++ +.+ ....|++|+|+|+|++|.++++.++..|+.
T Consensus 139 G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~------~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~ 212 (368)
T cd08300 139 STFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTA------KVEPGSTVAVFGLGAVGLAVIQGAKAAGAS 212 (368)
T ss_pred ccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 456666655442 22222111 12334455543 211 234689999999999999999999999997
Q ss_pred eEEEEeCCHHHHHHHHHHhCCcceeecccc---hHHhh----c-CCCcEEEEcCCCCccCCChhhhhcCCchhhhcC-Cc
Q 010322 272 KMVVVNRSEERVAAICEELNGVEIIYKPLS---EMLSC----A-ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVG-GL 342 (513)
Q Consensus 272 ~V~v~nRs~~ra~~la~~~g~~~~~~~~~~---~~~~~----l-~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~-g~ 342 (513)
+|+++++++++. ++++++|.. ..+...+ +..+. . .++|+||+|++++..+ ...++.+. ++ |.
T Consensus 213 ~vi~~~~~~~~~-~~~~~lGa~-~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~--~~a~~~l~-----~~~G~ 283 (368)
T cd08300 213 RIIGIDINPDKF-ELAKKFGAT-DCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVM--RAALEACH-----KGWGT 283 (368)
T ss_pred eEEEEeCCHHHH-HHHHHcCCC-EEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHH--HHHHHhhc-----cCCCe
Confidence 799999999988 567788752 2222211 12221 1 2699999999976443 33454432 23 66
Q ss_pred EEEEec
Q 010322 343 RLFIDI 348 (513)
Q Consensus 343 ~viiDl 348 (513)
.+.++.
T Consensus 284 ~v~~g~ 289 (368)
T cd08300 284 SVIIGV 289 (368)
T ss_pred EEEEcc
Confidence 777765
No 68
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=98.52 E-value=4e-07 Score=94.95 Aligned_cols=182 Identities=16% Similarity=0.171 Sum_probs=109.4
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH------HH----HHHHhHhcCcc--------cc-----hhhHHHHHHHh
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV------KQ----VVKVGQGVVGF--------GR-----NISGLFKHAIS 209 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv------k~----A~~~a~~~~~~--------g~-----~L~~lf~~ai~ 209 (513)
..|||+++.+.++++++..+.+|++...... .. .++.|...... |. ..++.|++++.
T Consensus 57 i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~ 136 (358)
T TIGR03451 57 LLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTL 136 (358)
T ss_pred ccccceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEE
Confidence 4799999999999999999999999876221 11 11112110000 00 11466777766
Q ss_pred hCcc----cccccc----cc-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH
Q 010322 210 VGKR----VRTETN----IA-AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE 280 (513)
Q Consensus 210 v~k~----Vr~et~----i~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~ 280 (513)
++.. ++.... .. ..+...++.++. ... ....|++|+|+|+|++|.++++.++..|+++|+++++++
T Consensus 137 v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~---~~~--~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~ 211 (358)
T TIGR03451 137 VHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAV---NTG--GVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDD 211 (358)
T ss_pred EehhheEECCCCCChhHhhhhcccchhhHHHHH---hcc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence 6542 221111 10 011222232211 111 224689999999999999999999999997799999998
Q ss_pred HHHHHHHHHhCCcceeecccc-hH----Hhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 281 ERVAAICEELNGVEIIYKPLS-EM----LSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 281 ~ra~~la~~~g~~~~~~~~~~-~~----~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
+|. ++++++|.. ..+...+ +. .+.. .++|+||+|++.+..+ ...+..+. ++|..++++.
T Consensus 212 ~~~-~~~~~~Ga~-~~i~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~--~~~~~~~~-----~~G~iv~~G~ 277 (358)
T TIGR03451 212 RKL-EWAREFGAT-HTVNSSGTDPVEAIRALTGGFGADVVIDAVGRPETY--KQAFYARD-----LAGTVVLVGV 277 (358)
T ss_pred HHH-HHHHHcCCc-eEEcCCCcCHHHHHHHHhCCCCCCEEEECCCCHHHH--HHHHHHhc-----cCCEEEEECC
Confidence 887 667788752 2222211 22 2222 2689999999986543 33444432 4677777765
No 69
>PRK06199 ornithine cyclodeaminase; Validated
Probab=98.46 E-value=7.6e-07 Score=93.96 Aligned_cols=87 Identities=16% Similarity=0.314 Sum_probs=71.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHH-c-CCCeEEEEeCCHHHHHHHHHHhCCc--ce-eecccchHHhhcCCCcEEEEcCCC
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVA-K-GCTKMVVVNRSEERVAAICEELNGV--EI-IYKPLSEMLSCAADADVVFTSTAS 319 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~-~-G~~~V~v~nRs~~ra~~la~~~g~~--~~-~~~~~~~~~~~l~~aDVVI~AT~s 319 (513)
..++++|||+|.+|+..+..+.. . +.++|.|+||+++++++|++++... .+ .+...++..+++.+||||++||++
T Consensus 154 da~~l~iiG~G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s 233 (379)
T PRK06199 154 DSKVVGLLGPGVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSG 233 (379)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCC
Confidence 56899999999999999999887 4 4889999999999999998877421 11 244457788889999999999987
Q ss_pred Cc------cCCChhhhhc
Q 010322 320 EA------PLFLKDHVQD 331 (513)
Q Consensus 320 ~~------~vi~~~~l~~ 331 (513)
.. |+|..++++.
T Consensus 234 ~~~~~s~~Pv~~~~~lkp 251 (379)
T PRK06199 234 ETGDPSTYPYVKREWVKP 251 (379)
T ss_pred CCCCCCcCcEecHHHcCC
Confidence 66 9988888753
No 70
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=98.44 E-value=6.7e-07 Score=93.60 Aligned_cols=182 Identities=15% Similarity=0.203 Sum_probs=109.7
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCcc--cc------------------hhhH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVGF--GR------------------NISG 202 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~~--g~------------------~L~~ 202 (513)
..|||+++.+.+|+++++.+.+|++.+.... .+..+.|.+.... |. ...+
T Consensus 58 i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g 137 (365)
T cd08277 58 ILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTS 137 (365)
T ss_pred ecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccc
Confidence 4699999999999999999999999876321 1122223221100 00 0135
Q ss_pred HHHHHHhhCcc--------ccccccccC-CCchHHHHHH-HHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCe
Q 010322 203 LFKHAISVGKR--------VRTETNIAA-GAVSVSSAAV-ELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTK 272 (513)
Q Consensus 203 lf~~ai~v~k~--------Vr~et~i~~-~~~Sva~~Av-~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~ 272 (513)
.|.+++.++.. +..+..... .+..++++++ +.+ ....|.+|+|+|+|++|.++++.++..|+.+
T Consensus 138 ~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~------~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~ 211 (365)
T cd08277 138 TFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTA------KVEPGSTVAVFGLGAVGLSAIMGAKIAGASR 211 (365)
T ss_pred cceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence 66666665542 222221111 1334444442 221 2347899999999999999999999999977
Q ss_pred EEEEeCCHHHHHHHHHHhCCcceeecccc---h----HHhhc-CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEE
Q 010322 273 MVVVNRSEERVAAICEELNGVEIIYKPLS---E----MLSCA-ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL 344 (513)
Q Consensus 273 V~v~nRs~~ra~~la~~~g~~~~~~~~~~---~----~~~~l-~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~v 344 (513)
|+++++++++. ++++++|... .+...+ + +.+.. .++|+||+|++.+..+ .+.+..+.+ .+|..+
T Consensus 212 Vi~~~~~~~~~-~~~~~~ga~~-~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~--~~~~~~l~~----~~G~~v 283 (365)
T cd08277 212 IIGVDINEDKF-EKAKEFGATD-FINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLM--NEALESTKL----GWGVSV 283 (365)
T ss_pred EEEEeCCHHHH-HHHHHcCCCc-EeccccccchHHHHHHHHhCCCCCEEEECCCChHHH--HHHHHhccc----CCCEEE
Confidence 99999998887 5667787421 121111 1 11111 3699999999975443 334444321 136677
Q ss_pred EEec
Q 010322 345 FIDI 348 (513)
Q Consensus 345 iiDl 348 (513)
.++.
T Consensus 284 ~~g~ 287 (365)
T cd08277 284 VVGV 287 (365)
T ss_pred EEcC
Confidence 7765
No 71
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.43 E-value=1.2e-06 Score=88.58 Aligned_cols=95 Identities=22% Similarity=0.338 Sum_probs=71.6
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEcccH-HHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHh
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGAGK-MGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLS 305 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGaG~-mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~ 305 (513)
++.+.+++.+. .+ .++.|++|+|||.|. +|+.++..|...|++ |+++++.. .++.+
T Consensus 141 Tp~ai~~ll~~-~~-i~l~Gk~vvVIGrs~~VG~pla~lL~~~gat-Vtv~~s~t--------------------~~l~~ 197 (286)
T PRK14175 141 TPLGIMEILKH-AD-IDLEGKNAVVIGRSHIVGQPVSKLLLQKNAS-VTILHSRS--------------------KDMAS 197 (286)
T ss_pred cHHHHHHHHHH-cC-CCCCCCEEEEECCCchhHHHHHHHHHHCCCe-EEEEeCCc--------------------hhHHH
Confidence 34444566544 22 478999999999988 999999999999985 88888642 12344
Q ss_pred hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCC
Q 010322 306 CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVG 355 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdid 355 (513)
.+..||+||+|+|.++. ++.++++. | .++||+++|++++
T Consensus 198 ~~~~ADIVIsAvg~p~~-i~~~~vk~---------g-avVIDvGi~~~~~ 236 (286)
T PRK14175 198 YLKDADVIVSAVGKPGL-VTKDVVKE---------G-AVIIDVGNTPDEN 236 (286)
T ss_pred HHhhCCEEEECCCCCcc-cCHHHcCC---------C-cEEEEcCCCcCCC
Confidence 56789999999999876 56666532 3 7999999988543
No 72
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=98.42 E-value=1.1e-06 Score=91.93 Aligned_cols=182 Identities=16% Similarity=0.208 Sum_probs=109.6
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhch----HH-------HHHHHhHhcCc-------ccchhhHHHHHHHhhCcc-
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQ----VK-------QVVKVGQGVVG-------FGRNISGLFKHAISVGKR- 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQ----vk-------~A~~~a~~~~~-------~g~~L~~lf~~ai~v~k~- 213 (513)
..|||+++.+.+++++++.+-+|++.+... +. +.++.|....+ .|...++.|.+++.++..
T Consensus 66 i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~ 145 (357)
T PLN02514 66 VPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKF 145 (357)
T ss_pred cCCceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHH
Confidence 479999999999999999999999997422 11 11222222100 011235667776666542
Q ss_pred ---ccc----ccccc-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 010322 214 ---VRT----ETNIA-AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAA 285 (513)
Q Consensus 214 ---Vr~----et~i~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~ 285 (513)
++. +.... ..+...+++++.. ++ ....|.+|+|+|+|++|.++++.++..|++ ++++.++.++...
T Consensus 146 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~----~~-~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~-vi~~~~~~~~~~~ 219 (357)
T PLN02514 146 VVKIPEGMAPEQAAPLLCAGVTVYSPLSH----FG-LKQSGLRGGILGLGGVGHMGVKIAKAMGHH-VTVISSSDKKREE 219 (357)
T ss_pred eEECCCCCCHHHhhhhhhhHHHHHHHHHH----cc-cCCCCCeEEEEcccHHHHHHHHHHHHCCCe-EEEEeCCHHHHHH
Confidence 221 11111 0111222333321 11 124789999999999999999999999985 7778888877766
Q ss_pred HHHHhCCcceeecccc--hHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 286 ICEELNGVEIIYKPLS--EMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 286 la~~~g~~~~~~~~~~--~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
+.+.+|.. ..+...+ .+.+...++|+||+|++.+..+ ...++.+. ++|..+.++.
T Consensus 220 ~~~~~Ga~-~~i~~~~~~~~~~~~~~~D~vid~~g~~~~~--~~~~~~l~-----~~G~iv~~G~ 276 (357)
T PLN02514 220 ALEHLGAD-DYLVSSDAAEMQEAADSLDYIIDTVPVFHPL--EPYLSLLK-----LDGKLILMGV 276 (357)
T ss_pred HHHhcCCc-EEecCCChHHHHHhcCCCcEEEECCCchHHH--HHHHHHhc-----cCCEEEEECC
Confidence 66778752 2222221 2333335789999999876443 34454443 4676777764
No 73
>PRK10083 putative oxidoreductase; Provisional
Probab=98.42 E-value=9.1e-07 Score=91.02 Aligned_cols=182 Identities=14% Similarity=0.214 Sum_probs=111.3
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHHH----------HHHHhHhcCcccchhhHHHHHHHhhCc--------c
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQ----------VVKVGQGVVGFGRNISGLFKHAISVGK--------R 213 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~----------A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~ 213 (513)
...|||+++.+..+++++.+.-+|+..+...+.. -.+.|.+.+..+...++.|++++.++. .
T Consensus 55 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~ 134 (339)
T PRK10083 55 RVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDA 134 (339)
T ss_pred cccccceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCC
Confidence 3579999999999999999899999987543221 112232222212112355666555544 2
Q ss_pred ccccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhCC
Q 010322 214 VRTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVA-KGCTKMVVVNRSEERVAAICEELNG 292 (513)
Q Consensus 214 Vr~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~-~G~~~V~v~nRs~~ra~~la~~~g~ 292 (513)
+..+......+.++++.++..+ ....|.+|+|+|+|.+|.++++.++. .|+..|+++++++++. +++.++|.
T Consensus 135 ~~~~~a~~~~~~~~a~~~~~~~------~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~-~~~~~~Ga 207 (339)
T PRK10083 135 IADQYAVMVEPFTIAANVTGRT------GPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERL-ALAKESGA 207 (339)
T ss_pred CCHHHHhhhchHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHH-HHHHHhCC
Confidence 2222222234555555444332 23468999999999999999999886 5998788899998887 67777875
Q ss_pred cceeecccc-hHHhhc----CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 293 VEIIYKPLS-EMLSCA----ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 293 ~~~~~~~~~-~~~~~l----~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
. ..+...+ +..+.+ .++|+||+|++.+..+ .+.++.+. ++|+.+.++.
T Consensus 208 ~-~~i~~~~~~~~~~~~~~g~~~d~vid~~g~~~~~--~~~~~~l~-----~~G~~v~~g~ 260 (339)
T PRK10083 208 D-WVINNAQEPLGEALEEKGIKPTLIIDAACHPSIL--EEAVTLAS-----PAARIVLMGF 260 (339)
T ss_pred c-EEecCccccHHHHHhcCCCCCCEEEECCCCHHHH--HHHHHHhh-----cCCEEEEEcc
Confidence 2 1222111 222222 1457999999976543 34444432 3566666653
No 74
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=98.41 E-value=7.1e-07 Score=93.41 Aligned_cols=182 Identities=13% Similarity=0.171 Sum_probs=109.6
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCcc-----------------cc-----hh
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVGF-----------------GR-----NI 200 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~~-----------------g~-----~L 200 (513)
..|||+++.+.++++++.++-+|++.+.... ++.++.|...+.. |. ..
T Consensus 59 i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~ 138 (369)
T cd08301 59 ILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVG 138 (369)
T ss_pred ccccccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeec
Confidence 4799999999999999999999999986311 1123333332110 00 01
Q ss_pred hHHHHHHHhhCcc----ccc----ccccc-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCC
Q 010322 201 SGLFKHAISVGKR----VRT----ETNIA-AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCT 271 (513)
Q Consensus 201 ~~lf~~ai~v~k~----Vr~----et~i~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~ 271 (513)
.+.|++++.++.. ++. +.... ..+...++++... .. ....|.+|+|.|+|++|.++++.++..|+.
T Consensus 139 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~---~~--~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~ 213 (369)
T cd08301 139 TSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWN---VA--KVKKGSTVAIFGLGAVGLAVAEGARIRGAS 213 (369)
T ss_pred cccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHh---hc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 2456666655442 111 11110 1122334443211 11 234789999999999999999999999997
Q ss_pred eEEEEeCCHHHHHHHHHHhCCcceeecccc---hHHh----hc-CCCcEEEEcCCCCccCCChhhhhcCCchhhhcC-Cc
Q 010322 272 KMVVVNRSEERVAAICEELNGVEIIYKPLS---EMLS----CA-ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVG-GL 342 (513)
Q Consensus 272 ~V~v~nRs~~ra~~la~~~g~~~~~~~~~~---~~~~----~l-~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~-g~ 342 (513)
+|+++++++++. ++++++|.. ..+...+ +..+ .. .++|+||+|++.+..+ ...+..+. ++ |.
T Consensus 214 ~vi~~~~~~~~~-~~~~~~Ga~-~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~--~~~~~~~~-----~~~g~ 284 (369)
T cd08301 214 RIIGVDLNPSKF-EQAKKFGVT-EFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAM--ISAFECVH-----DGWGV 284 (369)
T ss_pred eEEEEcCCHHHH-HHHHHcCCc-eEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHH--HHHHHHhh-----cCCCE
Confidence 799999999887 567788752 1222111 1211 11 2689999999886543 33444432 33 66
Q ss_pred EEEEec
Q 010322 343 RLFIDI 348 (513)
Q Consensus 343 ~viiDl 348 (513)
.++++.
T Consensus 285 ~v~~g~ 290 (369)
T cd08301 285 TVLLGV 290 (369)
T ss_pred EEEECc
Confidence 667765
No 75
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=98.40 E-value=2.7e-06 Score=78.92 Aligned_cols=97 Identities=21% Similarity=0.340 Sum_probs=64.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCcc
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
.+.|++++|+|.|..|+.+|+.|+..|+ +|+|++.+|-++-+ ..+.+ +.+. .+.+++..+|++|+|||.. .
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alq--A~~dG--f~v~---~~~~a~~~adi~vtaTG~~-~ 90 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQ--AAMDG--FEVM---TLEEALRDADIFVTATGNK-D 90 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHH--HHHTT---EEE----HHHHTTT-SEEEE-SSSS-S
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHH--hhhcC--cEec---CHHHHHhhCCEEEECCCCc-c
Confidence 4689999999999999999999999998 59999999987633 22222 2333 4566788999999999986 4
Q ss_pred CCChhhhhcCCchhhhcCCcEEEEecc-CCCCCC
Q 010322 323 LFLKDHVQDLPPVEAAVGGLRLFIDIS-VPRNVG 355 (513)
Q Consensus 323 vi~~~~l~~~~~~~~~~~g~~viiDla-vPrdid 355 (513)
+++.+++..+. ...++.+++ .+..|+
T Consensus 91 vi~~e~~~~mk-------dgail~n~Gh~d~Eid 117 (162)
T PF00670_consen 91 VITGEHFRQMK-------DGAILANAGHFDVEID 117 (162)
T ss_dssp SB-HHHHHHS--------TTEEEEESSSSTTSBT
T ss_pred ccCHHHHHHhc-------CCeEEeccCcCceeEe
Confidence 56778888763 237778875 344444
No 76
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.40 E-value=4.4e-07 Score=91.61 Aligned_cols=187 Identities=13% Similarity=0.193 Sum_probs=121.4
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHHHHH---HHhHh----------cCcccchh-----hHHHHHHHhhCc-
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVV---KVGQG----------VVGFGRNI-----SGLFKHAISVGK- 212 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~---~~a~~----------~~~~g~~L-----~~lf~~ai~v~k- 212 (513)
...|||-++.+.+|++.+..+-+|+..=++-+-... +.|+. ....|.+- .++|++++.+..
T Consensus 67 lV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~ 146 (360)
T KOG0023|consen 67 LVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEV 146 (360)
T ss_pred ccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeee
Confidence 457999999999999999999999976555432222 22222 11123333 345998876654
Q ss_pred ---cccccccc-cCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Q 010322 213 ---RVRTETNI-AAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICE 288 (513)
Q Consensus 213 ---~Vr~et~i-~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~ 288 (513)
+++..+.+ ...|+=+|-..|--+-...+ --+|++|.|+|+|++|...+++.+++|.+ |++++++..+.++..+
T Consensus 147 ~a~kIP~~~pl~~aAPlLCaGITvYspLk~~g--~~pG~~vgI~GlGGLGh~aVq~AKAMG~r-V~vis~~~~kkeea~~ 223 (360)
T KOG0023|consen 147 FAIKIPENLPLASAAPLLCAGITVYSPLKRSG--LGPGKWVGIVGLGGLGHMAVQYAKAMGMR-VTVISTSSKKKEEAIK 223 (360)
T ss_pred eEEECCCCCChhhccchhhcceEEeehhHHcC--CCCCcEEEEecCcccchHHHHHHHHhCcE-EEEEeCCchhHHHHHH
Confidence 34444432 22344444333322222232 23899999999999999999999999995 9999999877778888
Q ss_pred HhCCcceeecccc--h-HHhhcCCCcEEEEcCC--CCccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 289 ELNGVEIIYKPLS--E-MLSCAADADVVFTSTA--SEAPLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 289 ~~g~~~~~~~~~~--~-~~~~l~~aDVVI~AT~--s~~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
.+|+..+ ++..+ + ..++....|-++.+++ +.+++ ...+.-+. ++|+.++++++
T Consensus 224 ~LGAd~f-v~~~~d~d~~~~~~~~~dg~~~~v~~~a~~~~--~~~~~~lk-----~~Gt~V~vg~p 281 (360)
T KOG0023|consen 224 SLGADVF-VDSTEDPDIMKAIMKTTDGGIDTVSNLAEHAL--EPLLGLLK-----VNGTLVLVGLP 281 (360)
T ss_pred hcCccee-EEecCCHHHHHHHHHhhcCcceeeeeccccch--HHHHHHhh-----cCCEEEEEeCc
Confidence 8886422 22232 2 3444556788888888 77775 33343332 46889999874
No 77
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.38 E-value=6.7e-07 Score=89.94 Aligned_cols=184 Identities=15% Similarity=0.232 Sum_probs=118.2
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhh---chHHH-------HHHHhHhcCc-----------------ccch-hhH-
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQIL---AQVKQ-------VVKVGQGVVG-----------------FGRN-ISG- 202 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIl---gQvk~-------A~~~a~~~~~-----------------~g~~-L~~- 202 (513)
...|||+++-+..|+.|++.+..|+.+|. .|+.. --++|.+... -|.. .+.
T Consensus 63 ~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfm 142 (375)
T KOG0022|consen 63 VILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFM 142 (375)
T ss_pred eEecccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEec
Confidence 56899999999999999999999999884 33321 0111111100 0110 011
Q ss_pred ---HHHHHHhhCc----ccccc-----ccccCCCchHHHHHH-HHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcC
Q 010322 203 ---LFKHAISVGK----RVRTE-----TNIAAGAVSVSSAAV-ELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKG 269 (513)
Q Consensus 203 ---lf~~ai~v~k----~Vr~e-----t~i~~~~~Sva~~Av-~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G 269 (513)
-|.+|--++. ++... ..+..-.+|.+|-|+ ..|+ .-+|.++.|+|.|.+|.+++..++..|
T Consensus 143 g~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Ak------v~~GstvAVfGLG~VGLav~~Gaka~G 216 (375)
T KOG0022|consen 143 GTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAK------VEPGSTVAVFGLGGVGLAVAMGAKAAG 216 (375)
T ss_pred ccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcc------cCCCCEEEEEecchHHHHHHHhHHhcC
Confidence 1222211111 11111 112223566676553 3332 347999999999999999999999999
Q ss_pred CCeEEEEeCCHHHHHHHHHHhCCcceeeccc--ch-HHhhc-----CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCC
Q 010322 270 CTKMVVVNRSEERVAAICEELNGVEIIYKPL--SE-MLSCA-----ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGG 341 (513)
Q Consensus 270 ~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~--~~-~~~~l-----~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g 341 (513)
+.+|+-+|-+++|. +.++++|..+ -++|. .+ +.+.+ .++|.-|+|+|....+ .+.+..... ..|
T Consensus 217 AsrIIgvDiN~~Kf-~~ak~fGaTe-~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m--~~al~s~h~----GwG 288 (375)
T KOG0022|consen 217 ASRIIGVDINPDKF-EKAKEFGATE-FINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTM--RAALESCHK----GWG 288 (375)
T ss_pred cccEEEEecCHHHH-HHHHhcCcce-ecChhhccccHHHHHHHHhcCCceEEEEecCCHHHH--HHHHHHhhc----CCC
Confidence 99999999999998 7799998642 23333 11 23332 4899999999998776 556655432 348
Q ss_pred cEEEEecc
Q 010322 342 LRLFIDIS 349 (513)
Q Consensus 342 ~~viiDla 349 (513)
..++|+++
T Consensus 289 ~sv~iGv~ 296 (375)
T KOG0022|consen 289 KSVVIGVA 296 (375)
T ss_pred eEEEEEec
Confidence 88999985
No 78
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.37 E-value=6.7e-06 Score=87.74 Aligned_cols=93 Identities=18% Similarity=0.216 Sum_probs=68.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCcc
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
.+.|++|+|+|+|.+|+.++..|+..|+ +|+++++++.++.. +...|. .+.+ +.+.+.++|+||+||+.+.
T Consensus 209 ~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~-A~~~G~---~v~~---l~eal~~aDVVI~aTG~~~- 279 (425)
T PRK05476 209 LIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQ-AAMDGF---RVMT---MEEAAELGDIFVTATGNKD- 279 (425)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHH-HHhcCC---EecC---HHHHHhCCCEEEECCCCHH-
Confidence 4689999999999999999999999999 59999999888633 333342 3333 3455679999999998765
Q ss_pred CCChhhhhcCCchhhhcCCcEEEEeccCC
Q 010322 323 LFLKDHVQDLPPVEAAVGGLRLFIDISVP 351 (513)
Q Consensus 323 vi~~~~l~~~~~~~~~~~g~~viiDlavP 351 (513)
+++.+.+..+. .| .+++.++.+
T Consensus 280 vI~~~~~~~mK------~G-ailiNvG~~ 301 (425)
T PRK05476 280 VITAEHMEAMK------DG-AILANIGHF 301 (425)
T ss_pred HHHHHHHhcCC------CC-CEEEEcCCC
Confidence 55656666543 12 456655543
No 79
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.37 E-value=9.4e-06 Score=82.39 Aligned_cols=78 Identities=14% Similarity=0.241 Sum_probs=61.1
Q ss_pred CCCCCCeEEEEcccH-HHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 242 SSHATARMLVIGAGK-MGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 242 ~~l~g~~VlVIGaG~-mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
.++.|++|+|+|+|+ .|+.++..|...|+ .|++++|. ...++ +.+.++|+||+|||.+
T Consensus 155 i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~---t~~L~-----------------~~~~~aDIvI~AtG~~ 213 (283)
T PRK14192 155 IELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSR---TQNLP-----------------ELVKQADIIVGAVGKP 213 (283)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCC---chhHH-----------------HHhccCCEEEEccCCC
Confidence 468999999999998 99999999999999 79999983 22222 2336899999999988
Q ss_pred ccCCChhhhhcCCchhhhcCCcEEEEeccCC
Q 010322 321 APLFLKDHVQDLPPVEAAVGGLRLFIDISVP 351 (513)
Q Consensus 321 ~~vi~~~~l~~~~~~~~~~~g~~viiDlavP 351 (513)
.+ ++.+++.. ..+++|+++-
T Consensus 214 ~~-v~~~~lk~----------gavViDvg~n 233 (283)
T PRK14192 214 EL-IKKDWIKQ----------GAVVVDAGFH 233 (283)
T ss_pred Cc-CCHHHcCC----------CCEEEEEEEe
Confidence 75 56666532 2789999753
No 80
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=98.36 E-value=6.2e-07 Score=83.52 Aligned_cols=91 Identities=23% Similarity=0.363 Sum_probs=62.9
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCccCCCh
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLK 326 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~~ 326 (513)
++|.|||.|.||..++++|...|.. |+++||++++++++.+. +. ...++..+.+..+|+||.|++.+..+ .
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~-v~~~d~~~~~~~~~~~~-g~-----~~~~s~~e~~~~~dvvi~~v~~~~~v--~ 72 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYE-VTVYDRSPEKAEALAEA-GA-----EVADSPAEAAEQADVVILCVPDDDAV--E 72 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTE-EEEEESSHHHHHHHHHT-TE-----EEESSHHHHHHHBSEEEE-SSSHHHH--H
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCe-EEeeccchhhhhhhHHh-hh-----hhhhhhhhHhhcccceEeecccchhh--h
Confidence 5799999999999999999999985 99999999999888765 31 23356666677889999999986553 2
Q ss_pred hhhhc--CCchhhhcCCcEEEEecc
Q 010322 327 DHVQD--LPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 327 ~~l~~--~~~~~~~~~g~~viiDla 349 (513)
+.+.. +.+. .....++||++
T Consensus 73 ~v~~~~~i~~~---l~~g~iiid~s 94 (163)
T PF03446_consen 73 AVLFGENILAG---LRPGKIIIDMS 94 (163)
T ss_dssp HHHHCTTHGGG---S-TTEEEEE-S
T ss_pred hhhhhhHHhhc---cccceEEEecC
Confidence 22221 1110 12347889986
No 81
>PLN02702 L-idonate 5-dehydrogenase
Probab=98.34 E-value=2.5e-06 Score=89.05 Aligned_cols=182 Identities=19% Similarity=0.294 Sum_probs=111.7
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCccc-chhhHHHHHHHhhCc--------c
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVGFG-RNISGLFKHAISVGK--------R 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~~g-~~L~~lf~~ai~v~k--------~ 213 (513)
..|||+++.+.+++++++.+.+|+..+.... .+-++.|.+...++ ...++.|++++.++. .
T Consensus 76 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~ 155 (364)
T PLN02702 76 VIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPEN 155 (364)
T ss_pred ccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCC
Confidence 4699999999999999988889998876321 12233333221111 112456666665544 2
Q ss_pred ccccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc
Q 010322 214 VRTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV 293 (513)
Q Consensus 214 Vr~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~ 293 (513)
+..+......+.++++.++..+ ....+.+|+|+|+|.+|.++++.++..|+..|++++++.++. ++++++|..
T Consensus 156 l~~~~aa~~~~~~~a~~~~~~~------~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~-~~~~~~g~~ 228 (364)
T PLN02702 156 VSLEEGAMCEPLSVGVHACRRA------NIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERL-SVAKQLGAD 228 (364)
T ss_pred CCHHHHhhhhHHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHhCCC
Confidence 2222222224566666655332 234689999999999999999999999998788899988776 567778742
Q ss_pred ceeecc-c-chHHhh--------cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 294 EIIYKP-L-SEMLSC--------AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 294 ~~~~~~-~-~~~~~~--------l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
...... . .+..+. -.++|+||+|++.+..+ .+.++.+. .+|..+.++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~--~~~~~~l~-----~~G~~v~~g~ 286 (364)
T PLN02702 229 EIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTM--STALEATR-----AGGKVCLVGM 286 (364)
T ss_pred EEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHH--HHHHHHHh-----cCCEEEEEcc
Confidence 211111 1 122111 13689999999865443 34444432 3565555553
No 82
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=98.33 E-value=1.1e-06 Score=93.63 Aligned_cols=184 Identities=14% Similarity=0.181 Sum_probs=106.1
Q ss_pred HhcCCceeeeeeeeccCCC-CcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCcc------------ccccc
Q 010322 152 LLYNKDATQHLFEVSAGLD-SLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKR------------VRTET 218 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGld-S~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~------------Vr~et 218 (513)
...|||+++.+.+|++++. .+.+|++.+....-. ...|..+...|...++.|++++.++.. +..+.
T Consensus 64 ~i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~-c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~ 142 (410)
T cd08238 64 VILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALI-LPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAE 142 (410)
T ss_pred ceeccccEEEEEEeCCCccCCCCCCCEEEEcCCcC-CCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHH
Confidence 3579999999999999998 489999887642210 000000001222345777776666543 11112
Q ss_pred cccCCCchHHHHHHHHHH--------hhCCCCCCCCCeEEEEc-ccHHHHHHHHHHHHcC--CCeEEEEeCCHHHHHHHH
Q 010322 219 NIAAGAVSVSSAAVELAL--------MKLPESSHATARMLVIG-AGKMGKLVIKHLVAKG--CTKMVVVNRSEERVAAIC 287 (513)
Q Consensus 219 ~i~~~~~Sva~~Av~la~--------~~~~~~~l~g~~VlVIG-aG~mG~~ia~~L~~~G--~~~V~v~nRs~~ra~~la 287 (513)
....+|.+++.++..... ... ....|.+|+|+| +|++|.++++.++..| +.+|++++++++|. +++
T Consensus 143 aal~epl~~~~~~~~a~~~~~~~~~~~~~--~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~-~~a 219 (410)
T cd08238 143 ASLVEPLSCVIGAYTANYHLQPGEYRHRM--GIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERL-ARA 219 (410)
T ss_pred HhhcchHHHHHHHhhhcccccccchhhhc--CCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHH-HHH
Confidence 222245555433321100 111 234688999998 5999999999998875 45799999999988 566
Q ss_pred HHh--------CCcceeeccc--chHHh----hc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEE
Q 010322 288 EEL--------NGVEIIYKPL--SEMLS----CA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFI 346 (513)
Q Consensus 288 ~~~--------g~~~~~~~~~--~~~~~----~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~vii 346 (513)
+++ |.....+.+. ++..+ .. .++|+||++++.+..+ ...++.+. ++|..+++
T Consensus 220 ~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~--~~a~~~l~-----~~G~~v~~ 287 (410)
T cd08238 220 QRLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELV--EEADTLLA-----PDGCLNFF 287 (410)
T ss_pred HHhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHH--HHHHHHhc-----cCCeEEEE
Confidence 665 3210112221 12222 22 3699999999876544 34454432 24555554
No 83
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=98.30 E-value=3.2e-06 Score=87.61 Aligned_cols=181 Identities=17% Similarity=0.274 Sum_probs=111.2
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHH----------HHHHHhHhc--Cc-ccchhhHHHHHHHhhCc------
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVK----------QVVKVGQGV--VG-FGRNISGLFKHAISVGK------ 212 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk----------~A~~~a~~~--~~-~g~~L~~lf~~ai~v~k------ 212 (513)
...|||+++.+.+++++++...+|+..+...+. +-++.|... +. .+...++.|++++.++.
T Consensus 55 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~ 134 (351)
T cd08285 55 MILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLA 134 (351)
T ss_pred cccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceE
Confidence 457999999999999999999999998763221 111112110 00 01112455665555543
Q ss_pred ----cccccccc-cCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Q 010322 213 ----RVRTETNI-AAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIC 287 (513)
Q Consensus 213 ----~Vr~et~i-~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la 287 (513)
.+..+... ...+..++++++..+ ....|++|+|.|+|.+|.++++.++..|+..|++++++.++. +++
T Consensus 135 ~lP~~~~~~~aa~~~~~~~ta~~~~~~~------~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~-~~~ 207 (351)
T cd08285 135 PLPDGLTDEQAVMLPDMMSTGFHGAELA------NIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRV-ELA 207 (351)
T ss_pred ECCCCCCHHHhhhhccchhhHHHHHHcc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHH
Confidence 11111111 123556666664432 234689999999999999999999999998789999998876 777
Q ss_pred HHhCCcceeecccc--h----HHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 288 EELNGVEIIYKPLS--E----MLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 288 ~~~g~~~~~~~~~~--~----~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
+++|.. .+.+.. + +.... .++|++++|++.+..+ .+.++.+. ++|..+.++.
T Consensus 208 ~~~g~~--~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~--~~~~~~l~-----~~G~~v~~g~ 267 (351)
T cd08285 208 KEYGAT--DIVDYKNGDVVEQILKLTGGKGVDAVIIAGGGQDTF--EQALKVLK-----PGGTISNVNY 267 (351)
T ss_pred HHcCCc--eEecCCCCCHHHHHHHHhCCCCCcEEEECCCCHHHH--HHHHHHhh-----cCCEEEEecc
Confidence 788742 222211 1 22222 3689999999975433 33444432 3565665654
No 84
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=98.30 E-value=3e-06 Score=88.20 Aligned_cols=180 Identities=18% Similarity=0.276 Sum_probs=108.7
Q ss_pred hcCCceeeeeeeeccCCCC------cccCcchhhchH---------H-HHHHHhHhcCcccc-------hhhHHHHHHHh
Q 010322 153 LYNKDATQHLFEVSAGLDS------LVLGEGQILAQV---------K-QVVKVGQGVVGFGR-------NISGLFKHAIS 209 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS------~vvGE~qIlgQv---------k-~A~~~a~~~~~~g~-------~L~~lf~~ai~ 209 (513)
..|||+++.+.+|++++.+ +.+|+..+.... + +..+.|......|. ...+.|++++.
T Consensus 57 ~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~ 136 (361)
T cd08231 57 ILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIY 136 (361)
T ss_pred ccccCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEE
Confidence 5799999999999999986 889998876311 0 11112221111111 12467777776
Q ss_pred hCcc-----ccccc----cccC-CCchHHHHHHHHHHhhCCCCCC-CCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeC
Q 010322 210 VGKR-----VRTET----NIAA-GAVSVSSAAVELALMKLPESSH-ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNR 278 (513)
Q Consensus 210 v~k~-----Vr~et----~i~~-~~~Sva~~Av~la~~~~~~~~l-~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nR 278 (513)
++.. ++... .... .+.++++.++... ... .|.+|+|.|+|.+|.++++.++..|+++|+++.+
T Consensus 137 v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~------~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~ 210 (361)
T cd08231 137 LPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRA------GPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDG 210 (361)
T ss_pred ecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhc------cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 6542 12111 1111 3344455555432 233 7899999999999999999999999966999999
Q ss_pred CHHHHHHHHHHhCCcceeeccc----c----hHHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 279 SEERVAAICEELNGVEIIYKPL----S----EMLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 279 s~~ra~~la~~~g~~~~~~~~~----~----~~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
++++. .+++++|... .+... . .+.+.. .++|+||+|++....+ ...+..+. .+|..+.++
T Consensus 211 ~~~~~-~~~~~~g~~~-vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~--~~~~~~l~-----~~G~~v~~g 280 (361)
T cd08231 211 SPERL-ELAREFGADA-TIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAV--PEGLELLR-----RGGTYVLVG 280 (361)
T ss_pred CHHHH-HHHHHcCCCe-EEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHH--HHHHHHhc-----cCCEEEEEc
Confidence 98887 5566777421 11111 1 112222 3689999999875433 33444432 356566554
No 85
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=98.29 E-value=6.9e-06 Score=84.69 Aligned_cols=170 Identities=12% Similarity=0.037 Sum_probs=100.9
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccc-c----ccCCCchH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTET-N----IAAGAVSV 227 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et-~----i~~~~~Sv 227 (513)
..|+|+++.+.+|+++++.+.+|+..+... +....+..---..++.+++.+.... . ....+..+
T Consensus 71 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-----------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~t 139 (345)
T cd08293 71 SQVLDGGGVGVVEESKHQKFAVGDIVTSFN-----------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLT 139 (345)
T ss_pred CCceEeeEEEEEeccCCCCCCCCCEEEecC-----------CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHH
Confidence 369999999999999999999999887421 1111111000012233333221111 0 11123334
Q ss_pred HHHHHHHHHhhCCCCCCCC--CeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc-chH
Q 010322 228 SSAAVELALMKLPESSHAT--ARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL-SEM 303 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g--~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~-~~~ 303 (513)
++.++... . ....| ++|+|.|+ |++|.++++.++..|+.+|+++.++.++.+.+.+++|... .+... .++
T Consensus 140 a~~al~~~---~--~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~-vi~~~~~~~ 213 (345)
T cd08293 140 ALIGIQEK---G--HITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDA-AINYKTDNV 213 (345)
T ss_pred HHHHHHHh---c--cCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcE-EEECCCCCH
Confidence 44443211 0 11234 89999998 9999999999999998669999999888866666687532 22211 122
Q ss_pred Hhh----c-CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 304 LSC----A-ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 304 ~~~----l-~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
.+. . .++|+||+|++.+. + .+.+..+. ++|..+.++
T Consensus 214 ~~~i~~~~~~gvd~vid~~g~~~-~--~~~~~~l~-----~~G~iv~~G 254 (345)
T cd08293 214 AERLRELCPEGVDVYFDNVGGEI-S--DTVISQMN-----ENSHIILCG 254 (345)
T ss_pred HHHHHHHCCCCceEEEECCCcHH-H--HHHHHHhc-----cCCEEEEEe
Confidence 221 1 47999999998753 2 34555443 467677665
No 86
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=98.24 E-value=4.3e-06 Score=79.07 Aligned_cols=93 Identities=17% Similarity=0.280 Sum_probs=68.4
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCC--
Q 010322 242 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTAS-- 319 (513)
Q Consensus 242 ~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s-- 319 (513)
..+.|++|+|||.|.+|+.+++.|...|+ +|++++|+...... ....+ + .+.++.+.+..+|+|+.+.+.
T Consensus 32 ~~l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~-~~~~~---~---~~~~l~ell~~aDiv~~~~plt~ 103 (178)
T PF02826_consen 32 RELRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEG-ADEFG---V---EYVSLDELLAQADIVSLHLPLTP 103 (178)
T ss_dssp S-STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHH-HHHTT---E---EESSHHHHHHH-SEEEE-SSSST
T ss_pred cccCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhh-ccccc---c---eeeehhhhcchhhhhhhhhcccc
Confidence 46789999999999999999999999999 59999999765431 22222 2 334666777889999999775
Q ss_pred -CccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 320 -EAPLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 320 -~~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
...+|+.+.+..+. ...++|.++
T Consensus 104 ~T~~li~~~~l~~mk-------~ga~lvN~a 127 (178)
T PF02826_consen 104 ETRGLINAEFLAKMK-------PGAVLVNVA 127 (178)
T ss_dssp TTTTSBSHHHHHTST-------TTEEEEESS
T ss_pred ccceeeeeeeeeccc-------cceEEEecc
Confidence 45788988888764 237888876
No 87
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=98.24 E-value=3e-06 Score=85.70 Aligned_cols=71 Identities=28% Similarity=0.408 Sum_probs=58.7
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCccC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPL 323 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~v 323 (513)
.+|.+||.|.||..++.+|...|.. ++++||+++++.+++...|.. ...+..+....+|+||+|.+.+..+
T Consensus 1 ~kIafIGLG~MG~pmA~~L~~aG~~-v~v~~r~~~ka~~~~~~~Ga~-----~a~s~~eaa~~aDvVitmv~~~~~V 71 (286)
T COG2084 1 MKIAFIGLGIMGSPMAANLLKAGHE-VTVYNRTPEKAAELLAAAGAT-----VAASPAEAAAEADVVITMLPDDAAV 71 (286)
T ss_pred CeEEEEcCchhhHHHHHHHHHCCCE-EEEEeCChhhhhHHHHHcCCc-----ccCCHHHHHHhCCEEEEecCCHHHH
Confidence 3799999999999999999999984 999999999976777776642 2344566778999999999987654
No 88
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=98.23 E-value=4.3e-06 Score=86.20 Aligned_cols=181 Identities=15% Similarity=0.162 Sum_probs=108.9
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhc--h----HH----HHHHHhHhcCcccchhhHHHHHHHhhCcc------cc
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILA--Q----VK----QVVKVGQGVVGFGRNISGLFKHAISVGKR------VR 215 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlg--Q----vk----~A~~~a~~~~~~g~~L~~lf~~ai~v~k~------Vr 215 (513)
...|||+++.+.+|++++..+.+|+..+.. . +. .....|....+.|...++.|++++.++.. ++
T Consensus 55 ~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP 134 (345)
T cd08287 55 APIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVP 134 (345)
T ss_pred cccccceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECC
Confidence 357999999999999999888899988752 1 10 11122222223333345666666655431 12
Q ss_pred ccccc----c------CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 010322 216 TETNI----A------AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAA 285 (513)
Q Consensus 216 ~et~i----~------~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~ 285 (513)
..... . ..+..++++++..+ ....|.+|+|.|+|.+|.++++.++..|++.++++++++++. +
T Consensus 135 ~~l~~~~~~~~~~~~l~~~~~~a~~~~~~~------~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~-~ 207 (345)
T cd08287 135 GSPSDDEDLLPSLLALSDVMGTGHHAAVSA------GVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQ-A 207 (345)
T ss_pred CCCChhhhhhhhhHhhhcHHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-H
Confidence 11111 0 02344455554422 234689999999999999999999999997788888887776 6
Q ss_pred HHHHhCCcceeecccc-----hHHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 286 ICEELNGVEIIYKPLS-----EMLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 286 la~~~g~~~~~~~~~~-----~~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
+++++|. +..+.... .+.... .++|++++|++++..+ ...++.+. .+|..+.++
T Consensus 208 ~~~~~ga-~~v~~~~~~~~~~~i~~~~~~~~~d~il~~~g~~~~~--~~~~~~l~-----~~g~~v~~g 268 (345)
T cd08287 208 LAREFGA-TDIVAERGEEAVARVRELTGGVGADAVLECVGTQESM--EQAIAIAR-----PGGRVGYVG 268 (345)
T ss_pred HHHHcCC-ceEecCCcccHHHHHHHhcCCCCCCEEEECCCCHHHH--HHHHHhhc-----cCCEEEEec
Confidence 7777874 22222211 122222 3599999999875433 33344432 245555544
No 89
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.20 E-value=2e-05 Score=83.68 Aligned_cols=81 Identities=17% Similarity=0.169 Sum_probs=61.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCcc
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
.+.|++|+|+|+|++|+.+++.++..|++ |+++++++.++ ..+...|. .+.+. .+.+.++|+||+||+.+.
T Consensus 192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~-ViV~d~dp~r~-~~A~~~G~---~v~~l---eeal~~aDVVItaTG~~~- 262 (406)
T TIGR00936 192 LIAGKTVVVAGYGWCGKGIAMRARGMGAR-VIVTEVDPIRA-LEAAMDGF---RVMTM---EEAAKIGDIFITATGNKD- 262 (406)
T ss_pred CCCcCEEEEECCCHHHHHHHHHHhhCcCE-EEEEeCChhhH-HHHHhcCC---EeCCH---HHHHhcCCEEEECCCCHH-
Confidence 46899999999999999999999999995 99999998876 33444442 33333 345688999999999754
Q ss_pred CCChhhhhcC
Q 010322 323 LFLKDHVQDL 332 (513)
Q Consensus 323 vi~~~~l~~~ 332 (513)
+++.+.+..+
T Consensus 263 vI~~~~~~~m 272 (406)
T TIGR00936 263 VIRGEHFENM 272 (406)
T ss_pred HHHHHHHhcC
Confidence 4555566554
No 90
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=98.20 E-value=2e-05 Score=76.02 Aligned_cols=93 Identities=26% Similarity=0.346 Sum_probs=71.1
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 242 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 242 ~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
.++.|++|+|+|.|.||+.+++.|...|+ +|+++|+++++...+++.++. ...+.+++.. ..+|+++.|+..
T Consensus 24 ~~l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~---~~v~~~~l~~--~~~Dv~vp~A~~-- 95 (200)
T cd01075 24 DSLEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGA---TVVAPEEIYS--VDADVFAPCALG-- 95 (200)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCC---EEEcchhhcc--ccCCEEEecccc--
Confidence 57899999999999999999999999998 588999999988888877753 2333333322 379999988764
Q ss_pred cCCChhhhhcCCchhhhcCCcEEEEeccC
Q 010322 322 PLFLKDHVQDLPPVEAAVGGLRLFIDISV 350 (513)
Q Consensus 322 ~vi~~~~l~~~~~~~~~~~g~~viiDlav 350 (513)
.+++.+.++.+. ..++++-+.
T Consensus 96 ~~I~~~~~~~l~--------~~~v~~~AN 116 (200)
T cd01075 96 GVINDDTIPQLK--------AKAIAGAAN 116 (200)
T ss_pred cccCHHHHHHcC--------CCEEEECCc
Confidence 467777776642 257777664
No 91
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=98.18 E-value=4.1e-06 Score=70.54 Aligned_cols=92 Identities=26% Similarity=0.429 Sum_probs=63.1
Q ss_pred eEEEEcccHHHHHHHHHHHHcC--CCeEEEE-eCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCccCC
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKG--CTKMVVV-NRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLF 324 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G--~~~V~v~-nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi 324 (513)
+|.|||+|.||.++++.|...| ..+|+++ +|+++++.+++++++. .+.. .+..+.+..+|+||.|++....
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~---~~~~-~~~~~~~~~advvilav~p~~~-- 74 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGV---QATA-DDNEEAAQEADVVILAVKPQQL-- 74 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTT---EEES-EEHHHHHHHTSEEEE-S-GGGH--
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcc---cccc-CChHHhhccCCEEEEEECHHHH--
Confidence 5899999999999999999998 2368855 9999999999998863 2222 2445566789999999987643
Q ss_pred ChhhhhcCCchhhhcCCcEEEEeccC
Q 010322 325 LKDHVQDLPPVEAAVGGLRLFIDISV 350 (513)
Q Consensus 325 ~~~~l~~~~~~~~~~~g~~viiDlav 350 (513)
.+.+..+.. .....++||+..
T Consensus 75 -~~v~~~i~~----~~~~~~vis~~a 95 (96)
T PF03807_consen 75 -PEVLSEIPH----LLKGKLVISIAA 95 (96)
T ss_dssp -HHHHHHHHH----HHTTSEEEEEST
T ss_pred -HHHHHHHhh----ccCCCEEEEeCC
Confidence 223322210 113367888754
No 92
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=98.15 E-value=6.4e-06 Score=86.65 Aligned_cols=184 Identities=15% Similarity=0.151 Sum_probs=110.8
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCcc---cc-----------------h-hh
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVGF---GR-----------------N-IS 201 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~~---g~-----------------~-L~ 201 (513)
..|||+++.+..++++++.+.+|+....... .+..+.|...... |. + ..
T Consensus 63 v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (373)
T cd08299 63 ILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGT 142 (373)
T ss_pred cccccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCC
Confidence 4699999999999999998899998875321 1122333322111 00 0 13
Q ss_pred HHHHHHHhhCcc----cccc----ccccC-CCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCe
Q 010322 202 GLFKHAISVGKR----VRTE----TNIAA-GAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTK 272 (513)
Q Consensus 202 ~lf~~ai~v~k~----Vr~e----t~i~~-~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~ 272 (513)
+.|.+++.++.. ++.. ..... -+..++++++.. .. ....|.+|+|+|+|++|.+++..++..|+.+
T Consensus 143 G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~---~~--~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~ 217 (373)
T cd08299 143 STFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVN---TA--KVTPGSTCAVFGLGGVGLSAIMGCKAAGASR 217 (373)
T ss_pred CcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHh---cc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence 667777776653 2211 11111 134455554321 11 2346899999999999999999999999967
Q ss_pred EEEEeCCHHHHHHHHHHhCCcceeeccc--c-hHHhh----c-CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEE
Q 010322 273 MVVVNRSEERVAAICEELNGVEIIYKPL--S-EMLSC----A-ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL 344 (513)
Q Consensus 273 V~v~nRs~~ra~~la~~~g~~~~~~~~~--~-~~~~~----l-~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~v 344 (513)
|++++++.++. ++++.+|.. ..+... + +..+. . .++|+||+|++.+..+ .+.+....+ .+|..+
T Consensus 218 Vi~~~~~~~~~-~~a~~lGa~-~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~--~~~~~~~~~----~~G~~v 289 (373)
T cd08299 218 IIAVDINKDKF-AKAKELGAT-ECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTM--KAALASCHE----GYGVSV 289 (373)
T ss_pred EEEEcCCHHHH-HHHHHcCCc-eEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHH--HHHHHhhcc----CCCEEE
Confidence 99999998887 555777742 122211 1 11111 1 3699999999975543 223332211 256677
Q ss_pred EEecc
Q 010322 345 FIDIS 349 (513)
Q Consensus 345 iiDla 349 (513)
.++..
T Consensus 290 ~~g~~ 294 (373)
T cd08299 290 IVGVP 294 (373)
T ss_pred EEccC
Confidence 77653
No 93
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=98.14 E-value=9.7e-06 Score=83.50 Aligned_cols=180 Identities=12% Similarity=0.153 Sum_probs=107.2
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhch-------H----HHHHHHhHhcCcccchhhHHHHHHHhhCc--------c
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQ-------V----KQVVKVGQGVVGFGRNISGLFKHAISVGK--------R 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQ-------v----k~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~ 213 (513)
..|||+++.+.+++++++..-+|++.+... + .+.++.|......|...++.|.+++.++. .
T Consensus 57 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~ 136 (333)
T cd08296 57 VPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDD 136 (333)
T ss_pred ccCcceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCC
Confidence 469999999999999998888999987521 1 12333443322222212345555444443 2
Q ss_pred cccccccc-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC
Q 010322 214 VRTETNIA-AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG 292 (513)
Q Consensus 214 Vr~et~i~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~ 292 (513)
+..+.... ..+...++.++..+ ....+.+|+|.|+|.+|.++++.++..|++ |++++++.++. +++.++|.
T Consensus 137 ~~~~~aa~l~~~~~ta~~~~~~~------~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~-vi~~~~~~~~~-~~~~~~g~ 208 (333)
T cd08296 137 LDAAEAAPLLCAGVTTFNALRNS------GAKPGDLVAVQGIGGLGHLAVQYAAKMGFR-TVAISRGSDKA-DLARKLGA 208 (333)
T ss_pred CCHHHhhhhhhhhHHHHHHHHhc------CCCCCCEEEEECCcHHHHHHHHHHHHCCCe-EEEEeCChHHH-HHHHHcCC
Confidence 22111111 11222334444322 134688999999999999999999999995 88999998887 56677874
Q ss_pred cceeecccc-hHHh---hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 293 VEIIYKPLS-EMLS---CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 293 ~~~~~~~~~-~~~~---~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
. ..+...+ +..+ .+.++|++|++++.+..+ ...++.+. .+|..+.++.
T Consensus 209 ~-~~i~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~--~~~~~~l~-----~~G~~v~~g~ 260 (333)
T cd08296 209 H-HYIDTSKEDVAEALQELGGAKLILATAPNAKAI--SALVGGLA-----PRGKLLILGA 260 (333)
T ss_pred c-EEecCCCccHHHHHHhcCCCCEEEECCCchHHH--HHHHHHcc-----cCCEEEEEec
Confidence 2 1222111 2211 135789999998765443 33444432 3566666654
No 94
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=98.12 E-value=2.2e-05 Score=78.30 Aligned_cols=169 Identities=17% Similarity=0.187 Sum_probs=102.9
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccCCCchHHHHH
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAAGAVSVSSAA 231 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~~~~Sva~~A 231 (513)
...|+|+++.+.+++++++...+|+..+.-. ....+..---...+.+++.+..+......+..+++++
T Consensus 22 ~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~------------~~~~~~~v~~~~~~~ip~~l~~~~aa~~~~~~ta~~~ 89 (277)
T cd08255 22 LPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG------------PHAERVVVPANLLVPLPDGLPPERAALTALAATALNG 89 (277)
T ss_pred cccCcceeEEEEEeCCCCCCCCCCCEEEecC------------CcceEEEcCHHHeeECcCCCCHHHhHHHHHHHHHHHH
Confidence 5679999999999999998888999877631 0111110000123333433332222222344455555
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCc
Q 010322 232 VELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADAD 311 (513)
Q Consensus 232 v~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aD 311 (513)
+..+ ...+|.+++|.|+|.+|.++++.++..|+++|+++.+++++.. +++++|..+ .+....+....-.++|
T Consensus 90 ~~~~------~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~-~~~~~g~~~-~~~~~~~~~~~~~~~d 161 (277)
T cd08255 90 VRDA------EPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRE-LAEALGPAD-PVAADTADEIGGRGAD 161 (277)
T ss_pred HHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHH-HHHHcCCCc-cccccchhhhcCCCCC
Confidence 4322 2347899999999999999999999999876888999988884 888876211 1222211111124699
Q ss_pred EEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 312 VVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 312 VVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
+||+|++.+..+ ...+..+. .+|..+.++
T Consensus 162 ~vl~~~~~~~~~--~~~~~~l~-----~~g~~~~~g 190 (277)
T cd08255 162 VVIEASGSPSAL--ETALRLLR-----DRGRVVLVG 190 (277)
T ss_pred EEEEccCChHHH--HHHHHHhc-----CCcEEEEEe
Confidence 999998875433 33444432 345555554
No 95
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=98.11 E-value=1.2e-05 Score=83.49 Aligned_cols=175 Identities=19% Similarity=0.220 Sum_probs=105.7
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccCC-CchHHHH
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAAG-AVSVSSA 230 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~~-~~Sva~~ 230 (513)
...|.|+++.+.+|++|++...+|+..+... ..+ ..|....+..---..++.+|+.+..+...... ..-.++.
T Consensus 59 ~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~-----~~~-~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~ 132 (326)
T COG0604 59 FIPGSEAAGVVVAVGSGVTGFKVGDRVAALG-----GVG-RDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWL 132 (326)
T ss_pred CcccceeEEEEEEeCCCCCCcCCCCEEEEcc-----CCC-CCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHH
Confidence 4579999999999999999999999998864 111 11222222111112233334444444332211 1112333
Q ss_pred HHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc--hHHh--
Q 010322 231 AVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS--EMLS-- 305 (513)
Q Consensus 231 Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~--~~~~-- 305 (513)
++.. .. .-..|++|||.|+ |.+|..+++.++..|+. +.++..+.++.+ ++.++|+. .++.+. ++.+
T Consensus 133 ~l~~---~~--~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~-~v~~~~s~~k~~-~~~~lGAd--~vi~y~~~~~~~~v 203 (326)
T COG0604 133 ALFD---RA--GLKPGETVLVHGAAGGVGSAAIQLAKALGAT-VVAVVSSSEKLE-LLKELGAD--HVINYREEDFVEQV 203 (326)
T ss_pred HHHH---hc--CCCCCCEEEEecCCchHHHHHHHHHHHcCCc-EEEEecCHHHHH-HHHhcCCC--EEEcCCcccHHHHH
Confidence 3322 11 1235999999995 99999999999999985 555555557775 88888863 222221 2322
Q ss_pred --hc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 306 --CA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 306 --~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
.. .++|+|+++++.... ...+..+. ++|..+.++..
T Consensus 204 ~~~t~g~gvDvv~D~vG~~~~---~~~l~~l~-----~~G~lv~ig~~ 243 (326)
T COG0604 204 RELTGGKGVDVVLDTVGGDTF---AASLAALA-----PGGRLVSIGAL 243 (326)
T ss_pred HHHcCCCCceEEEECCCHHHH---HHHHHHhc-----cCCEEEEEecC
Confidence 22 269999999998654 23444443 35778888764
No 96
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=98.10 E-value=9.9e-06 Score=83.93 Aligned_cols=161 Identities=18% Similarity=0.287 Sum_probs=101.3
Q ss_pred hcCCceeeeeeeeccCCC--CcccCcchhhchHHH----------HHHHhHhcCcccc--hhhHHHHHHHhhCcc-----
Q 010322 153 LYNKDATQHLFEVSAGLD--SLVLGEGQILAQVKQ----------VVKVGQGVVGFGR--NISGLFKHAISVGKR----- 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGld--S~vvGE~qIlgQvk~----------A~~~a~~~~~~g~--~L~~lf~~ai~v~k~----- 213 (513)
..|+|+++.+.+|+.+++ .+-+|+..+..+... ....|......|. ..++.|++++.++..
T Consensus 65 ~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 144 (350)
T cd08256 65 IPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHK 144 (350)
T ss_pred ccCcceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEE
Confidence 369999999999999998 899999887643221 1122221111111 124556665555432
Q ss_pred ----ccccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHH
Q 010322 214 ----VRTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEE 289 (513)
Q Consensus 214 ----Vr~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~ 289 (513)
+..+......+..+++.++..+ ....|.+|+|.|+|.+|.++++.++..|+..|+++++++++. .++++
T Consensus 145 lP~~~~~~~aa~~~~~~ta~~a~~~~------~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~-~~~~~ 217 (350)
T cd08256 145 VPDDIPPEDAILIEPLACALHAVDRA------NIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERL-ALARK 217 (350)
T ss_pred CCCCCCHHHHhhhhHHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHH-HHHHH
Confidence 2222222224555666664332 134689999999999999999999999998788899998887 67777
Q ss_pred hCCcceeeccc-----chHHhhc--CCCcEEEEcCCCCc
Q 010322 290 LNGVEIIYKPL-----SEMLSCA--ADADVVFTSTASEA 321 (513)
Q Consensus 290 ~g~~~~~~~~~-----~~~~~~l--~~aDVVI~AT~s~~ 321 (513)
+|. +..+... +.+.... .++|+|++|++.+.
T Consensus 218 ~g~-~~v~~~~~~~~~~~~~~~~~~~~vdvvld~~g~~~ 255 (350)
T cd08256 218 FGA-DVVLNPPEVDVVEKIKELTGGYGCDIYIEATGHPS 255 (350)
T ss_pred cCC-cEEecCCCcCHHHHHHHHhCCCCCCEEEECCCChH
Confidence 774 2222111 1122222 25899999998643
No 97
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=98.10 E-value=3.3e-05 Score=64.13 Aligned_cols=68 Identities=28% Similarity=0.490 Sum_probs=54.3
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 242 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 242 ~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
.++.+++++|+|+|.+|+.++..|...|..+|+++|| |++|+||+.+.
T Consensus 19 ~~~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r--------------------------------di~i~~~~~~~ 66 (86)
T cd05191 19 KSLKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR--------------------------------DILVTATPAGV 66 (86)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--------------------------------CEEEEcCCCCC
Confidence 3578999999999999999999999987778999998 99999999998
Q ss_pred cCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 322 PLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 322 ~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
++.. +.+.... ...+++|++
T Consensus 67 ~~~~-~~~~~~~-------~~~~v~~~a 86 (86)
T cd05191 67 PVLE-EATAKIN-------EGAVVIDLA 86 (86)
T ss_pred CchH-HHHHhcC-------CCCEEEecC
Confidence 8743 2233321 236777764
No 98
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=98.10 E-value=2.7e-05 Score=76.35 Aligned_cols=180 Identities=19% Similarity=0.281 Sum_probs=105.1
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHH------HHHHHhHhcCcccchhhHHHHHHHhhCc--------cccccc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVK------QVVKVGQGVVGFGRNISGLFKHAISVGK--------RVRTET 218 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk------~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~Vr~et 218 (513)
..|+|+++.+.+++++++.+-+|+..+..... ..-..|......+....+.|++++.++. .+..+.
T Consensus 32 ~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~ 111 (271)
T cd05188 32 ILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEE 111 (271)
T ss_pred ccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCEeccccCCcceEEEEechHHeEECCCCCCHHH
Confidence 46999999999999999988999988763210 0000232222222223444544444433 222222
Q ss_pred cccC-CCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceee
Q 010322 219 NIAA-GAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIY 297 (513)
Q Consensus 219 ~i~~-~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~ 297 (513)
.... .+..+++.++.... ....+.+|+|.|+|.+|.++++.++..|. +|+++.+++++.+ ++..++.. .+
T Consensus 112 a~~~~~~~~~a~~~l~~~~-----~~~~~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~-~~~~~g~~--~~ 182 (271)
T cd05188 112 AALLPEPLATAYHALRRAG-----VLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLE-LAKELGAD--HV 182 (271)
T ss_pred hhHhcCHHHHHHHHHHhcc-----CCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHH-HHHHhCCc--ee
Confidence 2222 34555555544321 12478999999998899999999999996 5899999988774 44556532 11
Q ss_pred cccc--hHHhh-----cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 298 KPLS--EMLSC-----AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 298 ~~~~--~~~~~-----l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
.... +.... -..+|+||++++.+... ...++.+. ++|..+.++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~--~~~~~~l~-----~~G~~v~~~~ 233 (271)
T cd05188 183 IDYKEEDLEEELRLTGGGGADVVIDAVGGPETL--AQALRLLR-----PGGRIVVVGG 233 (271)
T ss_pred ccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHH--HHHHHhcc-----cCCEEEEEcc
Confidence 1111 11111 25799999999873222 23333332 3565555543
No 99
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.10 E-value=1.5e-05 Score=85.72 Aligned_cols=94 Identities=17% Similarity=0.168 Sum_probs=70.5
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 242 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 242 ~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
..+.|++|+|+|.|.+|+.+++.|+..|+ +|+++++++.++.. +...|. .+. ++.+.++.+|+||.||+..+
T Consensus 250 ~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~-A~~~G~---~~~---~leell~~ADIVI~atGt~~ 321 (476)
T PTZ00075 250 VMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQ-AAMEGY---QVV---TLEDVVETADIFVTATGNKD 321 (476)
T ss_pred CCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHH-HHhcCc---eec---cHHHHHhcCCEEEECCCccc
Confidence 35799999999999999999999999999 59999998877632 333332 333 34556789999999998654
Q ss_pred cCCChhhhhcCCchhhhcCCcEEEEeccCC
Q 010322 322 PLFLKDHVQDLPPVEAAVGGLRLFIDISVP 351 (513)
Q Consensus 322 ~vi~~~~l~~~~~~~~~~~g~~viiDlavP 351 (513)
+|+.+.++.+. ...++++++..
T Consensus 322 -iI~~e~~~~MK-------pGAiLINvGr~ 343 (476)
T PTZ00075 322 -IITLEHMRRMK-------NNAIVGNIGHF 343 (476)
T ss_pred -ccCHHHHhccC-------CCcEEEEcCCC
Confidence 77878887753 22577777644
No 100
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=98.06 E-value=3.1e-05 Score=78.23 Aligned_cols=151 Identities=18% Similarity=0.237 Sum_probs=93.9
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccCCCchHHHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAAGAVSVSSAAV 232 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~~~~Sva~~Av 232 (513)
..|+|+++.+..++++++..-+|+..+.-+ .+....++..--...+.+++.+ ....+...+.+.++.++
T Consensus 54 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~----------~g~~~~~~~v~~~~~~~lP~~~-~~~~~~~~~~~~a~~~~ 122 (312)
T cd08269 54 GPGHEGWGRVVALGPGVRGLAVGDRVAGLS----------GGAFAEYDLADADHAVPLPSLL-DGQAFPGEPLGCALNVF 122 (312)
T ss_pred ccceeeEEEEEEECCCCcCCCCCCEEEEec----------CCcceeeEEEchhheEECCCch-hhhHHhhhhHHHHHHHH
Confidence 469999999999999998888999887532 1222211111111223334433 11112123444555554
Q ss_pred HHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc-ch----HHhhc
Q 010322 233 ELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL-SE----MLSCA 307 (513)
Q Consensus 233 ~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~-~~----~~~~l 307 (513)
..+ ....+.+|+|.|+|.+|.++++.++..|++.|+++.+++++. +++..+|.. ..+... .+ +.+..
T Consensus 123 ~~~------~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~-~~~~~~g~~-~~~~~~~~~~~~~l~~~~ 194 (312)
T cd08269 123 RRG------WIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARL-ALARELGAT-EVVTDDSEAIVERVRELT 194 (312)
T ss_pred Hhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHhCCc-eEecCCCcCHHHHHHHHc
Confidence 421 234689999999999999999999999997688899988877 467777642 111111 11 22222
Q ss_pred --CCCcEEEEcCCCCcc
Q 010322 308 --ADADVVFTSTASEAP 322 (513)
Q Consensus 308 --~~aDVVI~AT~s~~~ 322 (513)
.+.|++|+|++.+..
T Consensus 195 ~~~~vd~vld~~g~~~~ 211 (312)
T cd08269 195 GGAGADVVIEAVGHQWP 211 (312)
T ss_pred CCCCCCEEEECCCCHHH
Confidence 369999999876543
No 101
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=98.04 E-value=1.4e-05 Score=84.28 Aligned_cols=183 Identities=16% Similarity=0.254 Sum_probs=109.7
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHH----------HHHHhHhcCcccchhhHHHHHHHhhCcc----ccc--
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQ----------VVKVGQGVVGFGRNISGLFKHAISVGKR----VRT-- 216 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~----------A~~~a~~~~~~g~~L~~lf~~ai~v~k~----Vr~-- 216 (513)
..|||+++.+.+|++++....+|+..+..++.. -...|...+..|...++.|++++.++.. ++.
T Consensus 90 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~ 169 (384)
T cd08265 90 VIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELR 169 (384)
T ss_pred ccccceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccc
Confidence 469999999999999998899999998743311 0122222222222224556665555542 221
Q ss_pred ---------cccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Q 010322 217 ---------ETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIC 287 (513)
Q Consensus 217 ---------et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la 287 (513)
+......+.+++++++..... .-..|.+|+|.|+|.+|.++++.++..|+.+|+++.++.++. +++
T Consensus 170 ~~~~~~~~~~~a~~~~~~~ta~~al~~~~~----~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~-~~~ 244 (384)
T cd08265 170 EIYSEDKAFEAGALVEPTSVAYNGLFIRGG----GFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERR-NLA 244 (384)
T ss_pred cccccCCCHHHhhhhhHHHHHHHHHHhhcC----CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHH
Confidence 111122345556665422101 234689999999999999999999999997788888888865 788
Q ss_pred HHhCCcceeecccc----h----HHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 288 EELNGVEIIYKPLS----E----MLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 288 ~~~g~~~~~~~~~~----~----~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
+++|.. ..+...+ + +.+.. .+.|+|++|++.+...+ .+.++.+. .+|+.+.++
T Consensus 245 ~~~g~~-~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~-~~~~~~l~-----~~G~~v~~g 307 (384)
T cd08265 245 KEMGAD-YVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATI-PQMEKSIA-----INGKIVYIG 307 (384)
T ss_pred HHcCCC-EEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHH-HHHHHHHH-----cCCEEEEEC
Confidence 888742 1221110 1 22222 36899999988643222 22333322 356555554
No 102
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=98.03 E-value=2.5e-05 Score=80.28 Aligned_cols=161 Identities=20% Similarity=0.304 Sum_probs=97.8
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhch------H---H-HHHHHhHhcCcccc-----hhhHHHHHHHhhCc-----
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQ------V---K-QVVKVGQGVVGFGR-----NISGLFKHAISVGK----- 212 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQ------v---k-~A~~~a~~~~~~g~-----~L~~lf~~ai~v~k----- 212 (513)
..|+|+++.+.+|+.++....+|+..+... + . +-.+.|.+....|. ..++.|++++.++.
T Consensus 56 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~ 135 (339)
T cd08232 56 VLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVP 135 (339)
T ss_pred ecCccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEE
Confidence 469999999999999998888999987621 1 0 00111221111111 01345555554443
Q ss_pred ---cccccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHH
Q 010322 213 ---RVRTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEE 289 (513)
Q Consensus 213 ---~Vr~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~ 289 (513)
.+..+......+..+++.++.. + ....+.+|+|.|+|.+|.++++.++..|+.+|+++++++++.. ++++
T Consensus 136 iP~~~~~~~aa~~~~~~~a~~~l~~----~--~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~-~~~~ 208 (339)
T cd08232 136 LPDGLSLRRAALAEPLAVALHAVNR----A--GDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLA-VARA 208 (339)
T ss_pred CcCCCCHHHhhhcchHHHHHHHHHh----c--CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHH
Confidence 2222222222344455555432 2 2347999999999999999999999999967999999887774 6777
Q ss_pred hCCcceeecccch--HHhh---cCCCcEEEEcCCCCcc
Q 010322 290 LNGVEIIYKPLSE--MLSC---AADADVVFTSTASEAP 322 (513)
Q Consensus 290 ~g~~~~~~~~~~~--~~~~---l~~aDVVI~AT~s~~~ 322 (513)
++.. .+.+..+ +... -.+.|+|++|++.+..
T Consensus 209 ~g~~--~vi~~~~~~~~~~~~~~~~vd~vld~~g~~~~ 244 (339)
T cd08232 209 MGAD--ETVNLARDPLAAYAADKGDFDVVFEASGAPAA 244 (339)
T ss_pred cCCC--EEEcCCchhhhhhhccCCCccEEEECCCCHHH
Confidence 7642 2222221 1111 2358999999886433
No 103
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=98.00 E-value=2e-05 Score=79.41 Aligned_cols=129 Identities=19% Similarity=0.382 Sum_probs=97.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc-ceeecccchHHhhcCCCcEEEEcC---CC
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV-EIIYKPLSEMLSCAADADVVFTST---AS 319 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~-~~~~~~~~~~~~~l~~aDVVI~AT---~s 319 (513)
....+|.|||.|-+|...++.+...|++ |++.++|.+|+..+-..|+.. ........++.+.+..+|+||.|. ++
T Consensus 166 V~~~kv~iiGGGvvgtnaAkiA~glgA~-Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpga 244 (371)
T COG0686 166 VLPAKVVVLGGGVVGTNAAKIAIGLGAD-VTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGA 244 (371)
T ss_pred CCCccEEEECCccccchHHHHHhccCCe-eEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCC
Confidence 3456899999999999999999999985 999999999999998888753 222333457888899999999984 55
Q ss_pred Ccc-CCChhhhhcCCchhhhcCCcEEEEeccCCC----------CCCcccccccCeEEEccCCHHHHHHHHH
Q 010322 320 EAP-LFLKDHVQDLPPVEAAVGGLRLFIDISVPR----------NVGSCVADVETARVYNVDDLKEVVAANK 380 (513)
Q Consensus 320 ~~~-vi~~~~l~~~~~~~~~~~g~~viiDlavPr----------didp~v~~l~gv~ly~iDdl~~v~~~~~ 380 (513)
..| +++.++++.+.+ ..++||+++.. ..+......+|+..|.+...+..+..+.
T Consensus 245 kaPkLvt~e~vk~Mkp-------GsVivDVAiDqGGc~Et~~~TTh~~PtY~~~gvvhY~VaNmPgaVprTs 309 (371)
T COG0686 245 KAPKLVTREMVKQMKP-------GSVIVDVAIDQGGCFETSHPTTHDDPTYEVDGVVHYGVANMPGAVPRTS 309 (371)
T ss_pred CCceehhHHHHHhcCC-------CcEEEEEEEcCCCceeccccccCCCCceeecCEEEEecCCCCccccchh
Confidence 556 567777877642 27899997642 2333455678999998888777665543
No 104
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=98.00 E-value=3.6e-05 Score=79.48 Aligned_cols=179 Identities=19% Similarity=0.251 Sum_probs=105.7
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHH----------HHHHHhHhcCcccc-hhhHHHHHHHhh--------Ccc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVK----------QVVKVGQGVVGFGR-NISGLFKHAISV--------GKR 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk----------~A~~~a~~~~~~g~-~L~~lf~~ai~v--------~k~ 213 (513)
..|+|+++.+.+++.++....+|+..+..... +.+..|.+....+. ...+.|++++.+ ++.
T Consensus 57 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~ 136 (343)
T cd05285 57 VLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDN 136 (343)
T ss_pred ccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCC
Confidence 46999999999999999888899988752110 11222221111000 012344444433 333
Q ss_pred ccccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc
Q 010322 214 VRTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV 293 (513)
Q Consensus 214 Vr~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~ 293 (513)
+..+......+.+++++++.++ ...+|.+|+|.|+|.+|.++++.++..|++.|+++.++.++. .+..+++..
T Consensus 137 ~~~~~aa~~~~~~~a~~~~~~~------~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~-~~~~~~g~~ 209 (343)
T cd05285 137 VSLEEGALVEPLSVGVHACRRA------GVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRL-EFAKELGAT 209 (343)
T ss_pred CCHHHhhhhhHHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHcCCc
Confidence 3322222223556666654332 234789999999999999999999999987688888888877 455666642
Q ss_pred ceeecccc---------hHHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 294 EIIYKPLS---------EMLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 294 ~~~~~~~~---------~~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
.+.... .+.... .++|+||+|+++...+ ...++.+. .+|..+.++
T Consensus 210 --~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~--~~~~~~l~-----~~G~~v~~g 265 (343)
T cd05285 210 --HTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCI--QTAIYATR-----PGGTVVLVG 265 (343)
T ss_pred --EEeccccccchhHHHHHHHHhCCCCCCEEEECCCCHHHH--HHHHHHhh-----cCCEEEEEc
Confidence 121111 122333 3489999998875332 33444432 346555554
No 105
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=97.99 E-value=6.7e-05 Score=76.87 Aligned_cols=161 Identities=13% Similarity=0.228 Sum_probs=98.9
Q ss_pred hcCCceeeeeeeeccCCCC-cccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCc--------cccccccc--c
Q 010322 153 LYNKDATQHLFEVSAGLDS-LVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGK--------RVRTETNI--A 221 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS-~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~Vr~et~i--~ 221 (513)
..|||+++.+.+++++++. +.+|+..+... + .++.|++++.++. .+..+... .
T Consensus 63 v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~--------------~--~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~ 126 (324)
T cd08291 63 PPGFEGSGTVVAAGGGPLAQSLIGKRVAFLA--------------G--SYGTYAEYAVADAQQCLPLPDGVSFEQGASSF 126 (324)
T ss_pred CCCcceEEEEEEECCCccccCCCCCEEEecC--------------C--CCCcchheeeecHHHeEECCCCCCHHHHhhhc
Confidence 5799999999999999986 88999887521 0 0355555555543 22221111 1
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCCCCeEEEE--cccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecc
Q 010322 222 AGAVSVSSAAVELALMKLPESSHATARMLVI--GAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKP 299 (513)
Q Consensus 222 ~~~~Sva~~Av~la~~~~~~~~l~g~~VlVI--GaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~ 299 (513)
..+.+ ++.++..+ ...+.+++|+ |+|.+|.++++.++..|++ |+++.+++++. ++++++|.. ..+..
T Consensus 127 ~~~~t-a~~~~~~~-------~~~~~~vlv~~~g~g~vG~~a~q~a~~~G~~-vi~~~~~~~~~-~~~~~~g~~-~~i~~ 195 (324)
T cd08291 127 VNPLT-ALGMLETA-------REEGAKAVVHTAAASALGRMLVRLCKADGIK-VINIVRRKEQV-DLLKKIGAE-YVLNS 195 (324)
T ss_pred ccHHH-HHHHHHhh-------ccCCCcEEEEccCccHHHHHHHHHHHHcCCE-EEEEeCCHHHH-HHHHHcCCc-EEEEC
Confidence 22221 23222221 2356677775 7799999999999999995 88889998887 556677742 12221
Q ss_pred c-chH----Hhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 300 L-SEM----LSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 300 ~-~~~----~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
. .+. .+.. .++|+||+|++.... ...+..+. ++|+.+.++.
T Consensus 196 ~~~~~~~~v~~~~~~~~~d~vid~~g~~~~---~~~~~~l~-----~~G~~v~~g~ 243 (324)
T cd08291 196 SDPDFLEDLKELIAKLNATIFFDAVGGGLT---GQILLAMP-----YGSTLYVYGY 243 (324)
T ss_pred CCccHHHHHHHHhCCCCCcEEEECCCcHHH---HHHHHhhC-----CCCEEEEEEe
Confidence 1 122 2222 368999999987543 23344432 3676777764
No 106
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=97.99 E-value=2.9e-05 Score=80.08 Aligned_cols=180 Identities=13% Similarity=0.201 Sum_probs=106.8
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCcccchhhHHHHHHHhhCcc--------c
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVGFGRNISGLFKHAISVGKR--------V 214 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~~g~~L~~lf~~ai~v~k~--------V 214 (513)
..|+|+++.+..|++++..+.+|+..+..+. .+.++.|......+...++.|++++.++.. +
T Consensus 60 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l 139 (341)
T PRK05396 60 VVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDI 139 (341)
T ss_pred ccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCC
Confidence 4799999999999999998999998876421 112233333222222234556655555442 2
Q ss_pred cccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcc
Q 010322 215 RTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVE 294 (513)
Q Consensus 215 r~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~ 294 (513)
..+......+.++++.++. . ....|++|+|.|+|.+|..+++.++..|+++|+++++++++. +++.++|..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~---~----~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~-~~~~~lg~~- 210 (341)
T PRK05396 140 PDDLAAIFDPFGNAVHTAL---S----FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRL-ELARKMGAT- 210 (341)
T ss_pred CHHHhHhhhHHHHHHHHHH---c----CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHhCCc-
Confidence 2112211223333333221 1 124789999999999999999999999997788888888776 666777742
Q ss_pred eeeccc-ch----HHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 295 IIYKPL-SE----MLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 295 ~~~~~~-~~----~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
..+... .+ +.... .++|+|++|+++...+ ...+..+. ++|..+.++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~--~~~~~~l~-----~~G~~v~~g~ 264 (341)
T PRK05396 211 RAVNVAKEDLRDVMAELGMTEGFDVGLEMSGAPSAF--RQMLDNMN-----HGGRIAMLGI 264 (341)
T ss_pred EEecCccccHHHHHHHhcCCCCCCEEEECCCCHHHH--HHHHHHHh-----cCCEEEEEec
Confidence 112111 11 21222 4799999998875432 23333332 3565666653
No 107
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=97.98 E-value=3.6e-05 Score=79.09 Aligned_cols=183 Identities=22% Similarity=0.251 Sum_probs=108.3
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCcccchhhHHHHHHHhhCcc----cccc
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVGFGRNISGLFKHAISVGKR----VRTE 217 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~~g~~L~~lf~~ai~v~k~----Vr~e 217 (513)
...|+|+++.+.++++++....+|+..+.-.. .+..+.|.+....|...++.|++++.++.. ++..
T Consensus 59 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 59 FTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred eecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCC
Confidence 35799999999999999988999999885321 111223333323333335666666555442 2211
Q ss_pred ----cccc-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC
Q 010322 218 ----TNIA-AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG 292 (513)
Q Consensus 218 ----t~i~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~ 292 (513)
.... .....++++++..... ....+.+|+|.|+|.+|.++++.++..|..+|+++.+++++.+. .+++|.
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~----~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~-~~~~g~ 213 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALP----YLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKL-AERLGA 213 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcc----cCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHH-HHHhCC
Confidence 1111 1123344555432211 12368999999999999999999999984358888899888754 467774
Q ss_pred cceeecccc----hHHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 293 VEIIYKPLS----EMLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 293 ~~~~~~~~~----~~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
. ..+...+ .+.+.. .++|+|++|++.+..+ .+.++.+. .+|..+.++
T Consensus 214 ~-~~~~~~~~~~~~i~~~~~~~~~dvvld~~g~~~~~--~~~~~~l~-----~~g~~i~~g 266 (340)
T cd05284 214 D-HVLNASDDVVEEVRELTGGRGADAVIDFVGSDETL--ALAAKLLA-----KGGRYVIVG 266 (340)
T ss_pred c-EEEcCCccHHHHHHHHhCCCCCCEEEEcCCCHHHH--HHHHHHhh-----cCCEEEEEc
Confidence 2 1221111 122222 3689999999974332 33444432 356555554
No 108
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=97.97 E-value=4.9e-05 Score=79.57 Aligned_cols=186 Identities=16% Similarity=0.246 Sum_probs=106.3
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhc-----hHH----HHHHHhHhcCc---cc--------------------chh
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILA-----QVK----QVVKVGQGVVG---FG--------------------RNI 200 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlg-----Qvk----~A~~~a~~~~~---~g--------------------~~L 200 (513)
..|+|+++.+.+|+++++.+.+|++.... ++. +..+.|.+... .| ...
T Consensus 58 v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (365)
T cd08278 58 VLGHEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFG 137 (365)
T ss_pred ccccceeEEEEEeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCccccccccc
Confidence 46999999999999999989999988751 110 11111211100 00 011
Q ss_pred hHHHHHHHhhCcc----ccccccc-cCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEE
Q 010322 201 SGLFKHAISVGKR----VRTETNI-AAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVV 275 (513)
Q Consensus 201 ~~lf~~ai~v~k~----Vr~et~i-~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v 275 (513)
.+.|++++.++.. ++..... ...+++++++....+..... ....+++|+|.|+|.+|.++++.++..|++.|++
T Consensus 138 ~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~-~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~ 216 (365)
T cd08278 138 QSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVL-KPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIA 216 (365)
T ss_pred ccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE
Confidence 3556666655542 2211110 11233333332111111111 1236899999999999999999999999987999
Q ss_pred EeCCHHHHHHHHHHhCCcceeecccc-h----HHhh-cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 276 VNRSEERVAAICEELNGVEIIYKPLS-E----MLSC-AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 276 ~nRs~~ra~~la~~~g~~~~~~~~~~-~----~~~~-l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
+++++++. .++++++.. ..+...+ + +.+. -.++|+|++|++++..+ ...++.+. .+|..+.++.
T Consensus 217 ~~~~~~k~-~~~~~~g~~-~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~--~~~~~~l~-----~~G~~v~~g~ 286 (365)
T cd08278 217 VDIVDSRL-ELAKELGAT-HVINPKEEDLVAAIREITGGGVDYALDTTGVPAVI--EQAVDALA-----PRGTLALVGA 286 (365)
T ss_pred EeCCHHHH-HHHHHcCCc-EEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHH--HHHHHHhc-----cCCEEEEeCc
Confidence 99998887 567777642 1121111 1 1111 14799999999875443 34444432 3565665553
No 109
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=97.96 E-value=2.7e-05 Score=80.55 Aligned_cols=170 Identities=15% Similarity=0.188 Sum_probs=100.1
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhch------HH----HHHHHhHhcCcccchhhHHHHHHHhhCc--------cc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQ------VK----QVVKVGQGVVGFGRNISGLFKHAISVGK--------RV 214 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQ------vk----~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~V 214 (513)
..|+|+++.+.++++++++..+|+..+.-. +. .-++.|......|....+.+++++.++. .+
T Consensus 69 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~ 148 (350)
T cd08240 69 VLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGL 148 (350)
T ss_pred ccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCC
Confidence 469999999999999999999999886521 11 1111222211112112344444444433 22
Q ss_pred ccccccc-CCCchHHHHHHHHHHhhCCCCCC-CCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC
Q 010322 215 RTETNIA-AGAVSVSSAAVELALMKLPESSH-ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG 292 (513)
Q Consensus 215 r~et~i~-~~~~Sva~~Av~la~~~~~~~~l-~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~ 292 (513)
....... .-+...+++++..+ ..+ .+.+|+|.|+|.+|.++++.++..|++.|+++.++.++. .+++++|.
T Consensus 149 s~~~aa~l~~~~~tA~~~~~~~------~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~-~~~~~~g~ 221 (350)
T cd08240 149 DPALAATLACSGLTAYSAVKKL------MPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKL-EAAKAAGA 221 (350)
T ss_pred CHHHeehhhchhhhHHHHHHhc------ccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHhCC
Confidence 2222111 11223445554332 123 689999999999999999999999997798999998887 44567774
Q ss_pred cceeecccc-----hHHhhcC-CCcEEEEcCCCCccCCChhhhhcC
Q 010322 293 VEIIYKPLS-----EMLSCAA-DADVVFTSTASEAPLFLKDHVQDL 332 (513)
Q Consensus 293 ~~~~~~~~~-----~~~~~l~-~aDVVI~AT~s~~~vi~~~~l~~~ 332 (513)
. ..+...+ .+.+... ++|+||++++++..+ ...+..+
T Consensus 222 ~-~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~--~~~~~~l 264 (350)
T cd08240 222 D-VVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNSATA--SLAFDIL 264 (350)
T ss_pred c-EEecCCCccHHHHHHHHhCCCCcEEEECCCCHHHH--HHHHHHh
Confidence 2 1221111 1222222 689999999865433 3344443
No 110
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=97.93 E-value=2.8e-05 Score=81.64 Aligned_cols=160 Identities=19% Similarity=0.271 Sum_probs=99.7
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhch------HH----HHHHHhHhc------Ccccc----hhhHHHHHHHhhC
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQ------VK----QVVKVGQGV------VGFGR----NISGLFKHAISVG 211 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQ------vk----~A~~~a~~~------~~~g~----~L~~lf~~ai~v~ 211 (513)
...|||+++.+..|+.++..+.+|+..+... .. ..+..|... +..|. ..++.|++++.++
T Consensus 55 ~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~ 134 (375)
T cd08282 55 LVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVP 134 (375)
T ss_pred ceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEee
Confidence 3579999999999999999899999987621 11 111112111 00011 1235566666555
Q ss_pred c----------ccccc----ccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEe
Q 010322 212 K----------RVRTE----TNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVN 277 (513)
Q Consensus 212 k----------~Vr~e----t~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~n 277 (513)
. .+..+ ......+..++++++..+ ....|.+|+|.|+|.+|.++++.++..|+.+|++++
T Consensus 135 ~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~~~~------~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~ 208 (375)
T cd08282 135 YADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGLELA------GVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVD 208 (375)
T ss_pred cccCcEEECCCCCChhhhhheeeecchHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 3 12121 111223456667765433 234689999999999999999999999987788899
Q ss_pred CCHHHHHHHHHHhCCcceeeccc-chH----Hhhc-CCCcEEEEcCCCC
Q 010322 278 RSEERVAAICEELNGVEIIYKPL-SEM----LSCA-ADADVVFTSTASE 320 (513)
Q Consensus 278 Rs~~ra~~la~~~g~~~~~~~~~-~~~----~~~l-~~aDVVI~AT~s~ 320 (513)
++.++. +++.++|.. .+... .+. .+.. .++|+|++|++.+
T Consensus 209 ~~~~~~-~~~~~~g~~--~v~~~~~~~~~~i~~~~~~~~d~v~d~~g~~ 254 (375)
T cd08282 209 HVPERL-DLAESIGAI--PIDFSDGDPVEQILGLEPGGVDRAVDCVGYE 254 (375)
T ss_pred CCHHHH-HHHHHcCCe--EeccCcccHHHHHHHhhCCCCCEEEECCCCc
Confidence 998876 666677741 12111 111 1111 3689999999875
No 111
>PLN02928 oxidoreductase family protein
Probab=97.92 E-value=2.7e-05 Score=81.46 Aligned_cols=96 Identities=18% Similarity=0.248 Sum_probs=69.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH--------HHhCCcceeecccchHHhhcCCCcEEE
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIC--------EELNGVEIIYKPLSEMLSCAADADVVF 314 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la--------~~~g~~~~~~~~~~~~~~~l~~aDVVI 314 (513)
.+.|++|+|||.|.||+.+++.|...|+ +|++++|+..+..... ..+.. ......++.+.+..+|+|+
T Consensus 156 ~l~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~L~ell~~aDiVv 231 (347)
T PLN02928 156 TLFGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPEDGLLIPNGDVDDLVD---EKGGHEDIYEFAGEADIVV 231 (347)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhhhhhcccccccccccc---ccCcccCHHHHHhhCCEEE
Confidence 5789999999999999999999999999 5999999743221100 00000 0114457788889999999
Q ss_pred EcCCCC---ccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 315 TSTASE---APLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 315 ~AT~s~---~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
.+++.. ..+|+.+.+..+. ...++|+++
T Consensus 232 l~lPlt~~T~~li~~~~l~~Mk-------~ga~lINva 262 (347)
T PLN02928 232 LCCTLTKETAGIVNDEFLSSMK-------KGALLVNIA 262 (347)
T ss_pred ECCCCChHhhcccCHHHHhcCC-------CCeEEEECC
Confidence 997754 4578888887764 226788775
No 112
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.91 E-value=4.3e-05 Score=79.48 Aligned_cols=91 Identities=12% Similarity=0.211 Sum_probs=67.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc-
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA- 321 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~- 321 (513)
.+.|++|+|||.|.||+.+++.|...|. +|.+++|+.... ....++. . +.++.+.+..+|+|+.+++.+.
T Consensus 147 ~L~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~--~~~~~~~---~---~~~l~ell~~aDiV~l~lP~t~~ 217 (333)
T PRK13243 147 DVYGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE--AEKELGA---E---YRPLEELLRESDFVSLHVPLTKE 217 (333)
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh--hHHHcCC---E---ecCHHHHHhhCCEEEEeCCCChH
Confidence 5789999999999999999999999998 599999986433 2233331 2 2356677889999999998753
Q ss_pred --cCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 322 --PLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 322 --~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
.+++.+.+..+. ...++|+++
T Consensus 218 T~~~i~~~~~~~mk-------~ga~lIN~a 240 (333)
T PRK13243 218 TYHMINEERLKLMK-------PTAILVNTA 240 (333)
T ss_pred HhhccCHHHHhcCC-------CCeEEEECc
Confidence 567777666653 226777765
No 113
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=97.91 E-value=3.2e-05 Score=79.10 Aligned_cols=177 Identities=14% Similarity=0.186 Sum_probs=106.6
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH-----------HHHHHHhHhcCcccchhhHHHHHHHhhCcc----cccc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV-----------KQVVKVGQGVVGFGRNISGLFKHAISVGKR----VRTE 217 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv-----------k~A~~~a~~~~~~g~~L~~lf~~ai~v~k~----Vr~e 217 (513)
..|+|+++.+..++++++...+|+..+...+ ....+.|......|...++.|.+++.++.. ++..
T Consensus 61 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~ 140 (329)
T cd08298 61 IPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPED 140 (329)
T ss_pred cccccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCC
Confidence 5799999999999999988888998865211 112233433333333234555555555442 1111
Q ss_pred cc-----ccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC
Q 010322 218 TN-----IAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG 292 (513)
Q Consensus 218 t~-----i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~ 292 (513)
.. ....+...++++++.+ ....+.+|+|.|+|.+|.+++..++..|+ +|+++.++.++. ++++++|.
T Consensus 141 ~~~~~~~~~~~~~~ta~~~~~~~------~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~-~~~~~~g~ 212 (329)
T cd08298 141 YDDEEAAPLLCAGIIGYRALKLA------GLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQ-ELARELGA 212 (329)
T ss_pred CCHHHhhHhhhhhHHHHHHHHhh------CCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHH-HHHHHhCC
Confidence 11 1112333445554332 23468899999999999999999999998 588888888777 55577774
Q ss_pred cceeecccchHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 293 VEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 293 ~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
...+ ..... .-.+.|++|++++.+..+ .+.++.+. .+|..+.++.
T Consensus 213 -~~~~-~~~~~--~~~~vD~vi~~~~~~~~~--~~~~~~l~-----~~G~~v~~g~ 257 (329)
T cd08298 213 -DWAG-DSDDL--PPEPLDAAIIFAPVGALV--PAALRAVK-----KGGRVVLAGI 257 (329)
T ss_pred -cEEe-ccCcc--CCCcccEEEEcCCcHHHH--HHHHHHhh-----cCCEEEEEcC
Confidence 2112 11211 114689999988765432 34444433 3566666553
No 114
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.90 E-value=2.6e-05 Score=78.80 Aligned_cols=92 Identities=13% Similarity=0.221 Sum_probs=64.4
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCC---CeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCccC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGC---TKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPL 323 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~---~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~v 323 (513)
.+|.|||+|.||..++..|...|. .+|+++||++++++.+.+++|. .. ..+..+.+..+|+||.|++ |..+
T Consensus 3 ~~IgfIG~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~---~~--~~~~~e~~~~aDiIiLavk-P~~~ 76 (272)
T PRK12491 3 KQIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGI---TI--TTNNNEVANSADILILSIK-PDLY 76 (272)
T ss_pred CeEEEECccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCc---EE--eCCcHHHHhhCCEEEEEeC-hHHH
Confidence 579999999999999999998874 4699999999998887776652 22 2334445678999999999 4333
Q ss_pred CChhhhhcCCchhhhcCCcEEEEecc
Q 010322 324 FLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 324 i~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
.+.++.+.+. ..+..++||+.
T Consensus 77 --~~vl~~l~~~---~~~~~lvISi~ 97 (272)
T PRK12491 77 --SSVINQIKDQ---IKNDVIVVTIA 97 (272)
T ss_pred --HHHHHHHHHh---hcCCcEEEEeC
Confidence 2333322110 11236888884
No 115
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=97.90 E-value=7.2e-05 Score=76.57 Aligned_cols=179 Identities=18% Similarity=0.242 Sum_probs=103.6
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHH----------HHHHhHhcCcccchhhHHHHHHHhh--------Cccc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQ----------VVKVGQGVVGFGRNISGLFKHAISV--------GKRV 214 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~----------A~~~a~~~~~~g~~L~~lf~~ai~v--------~k~V 214 (513)
..|+|+++.+..++.+++.+-+|+..+....-. .-..+...+..|...++.+++++.+ ++.+
T Consensus 55 ~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~ 134 (334)
T cd08234 55 VPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNL 134 (334)
T ss_pred ccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCC
Confidence 579999999999999998889999987633210 0011111111111123344443333 3333
Q ss_pred cccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcc
Q 010322 215 RTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVE 294 (513)
Q Consensus 215 r~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~ 294 (513)
.........+...++.++..+ .-..|.+|+|+|+|.+|.++++.++..|++.|+++++++++... +.+++..
T Consensus 135 ~~~~aa~~~~~~~a~~~l~~~------~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~-~~~~g~~- 206 (334)
T cd08234 135 SFEEAALAEPLSCAVHGLDLL------GIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLEL-AKKLGAT- 206 (334)
T ss_pred CHHHHhhhhHHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHH-HHHhCCe-
Confidence 222222223333444443222 23468899999999999999999999998778899999888744 4666642
Q ss_pred eeecccc--hHH--h--hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 295 IIYKPLS--EML--S--CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 295 ~~~~~~~--~~~--~--~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
.+.... +.. . .-.++|++|+|++++..+ ...++.+. ++|..+.++
T Consensus 207 -~~~~~~~~~~~~~~~~~~~~vd~v~~~~~~~~~~--~~~~~~l~-----~~G~~v~~g 257 (334)
T cd08234 207 -ETVDPSREDPEAQKEDNPYGFDVVIEATGVPKTL--EQAIEYAR-----RGGTVLVFG 257 (334)
T ss_pred -EEecCCCCCHHHHHHhcCCCCcEEEECCCChHHH--HHHHHHHh-----cCCEEEEEe
Confidence 222221 111 1 124699999999865432 33343332 345555554
No 116
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=97.89 E-value=4.6e-05 Score=78.39 Aligned_cols=171 Identities=16% Similarity=0.213 Sum_probs=101.5
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCcccc----hhhHHHHHHHhhC-------
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVGFGR----NISGLFKHAISVG------- 211 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~~g~----~L~~lf~~ai~v~------- 211 (513)
..|+|+++.+.+|+++++...+|+..+.... ......|...+.+|. ..++.|++++.++
T Consensus 56 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~ 135 (344)
T cd08284 56 VLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLL 135 (344)
T ss_pred ccccceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceE
Confidence 5799999999999999999999998876321 111112211111110 0134454444443
Q ss_pred ---ccccccccc-cCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Q 010322 212 ---KRVRTETNI-AAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIC 287 (513)
Q Consensus 212 ---k~Vr~et~i-~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la 287 (513)
..+..+... ...+..++++++..+ ....|.+|+|.|+|.+|.++++.++..|+.+|++++++.++. .++
T Consensus 136 ~~p~~l~~~~a~~l~~~~~ta~~~~~~~------~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~-~~~ 208 (344)
T cd08284 136 KLPDGLSDEAALLLGDILPTGYFGAKRA------QVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERL-ERA 208 (344)
T ss_pred ECCCCCCHHHhhhhcCchHHHHhhhHhc------CCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHH-HHH
Confidence 222211111 123455666665432 234689999999999999999999999986688888887776 566
Q ss_pred HHhCCcceeeccc---chHHhhc--CCCcEEEEcCCCCccCCChhhhhcC
Q 010322 288 EELNGVEIIYKPL---SEMLSCA--ADADVVFTSTASEAPLFLKDHVQDL 332 (513)
Q Consensus 288 ~~~g~~~~~~~~~---~~~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~ 332 (513)
.++|...+..... ..+.+.. .+.|++|+|++.+..+ ...+..+
T Consensus 209 ~~~g~~~~~~~~~~~~~~l~~~~~~~~~dvvid~~~~~~~~--~~~~~~l 256 (344)
T cd08284 209 AALGAEPINFEDAEPVERVREATEGRGADVVLEAVGGAAAL--DLAFDLV 256 (344)
T ss_pred HHhCCeEEecCCcCHHHHHHHHhCCCCCCEEEECCCCHHHH--HHHHHhc
Confidence 6777421111111 1122222 4699999999875443 3344443
No 117
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.89 E-value=4.3e-05 Score=77.86 Aligned_cols=92 Identities=21% Similarity=0.316 Sum_probs=68.0
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEccc-HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHh
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGAG-KMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLS 305 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGaG-~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~ 305 (513)
++.+.+++.+.. + .++.|++|+|||.| -||+.++.+|...|+. |++++++.. ++.+
T Consensus 142 Tp~aii~lL~~~-~-i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gat-Vtv~~~~t~--------------------~l~e 198 (301)
T PRK14194 142 TPSGCLRLLEDT-C-GDLTGKHAVVIGRSNIVGKPMAALLLQAHCS-VTVVHSRST--------------------DAKA 198 (301)
T ss_pred cHHHHHHHHHHh-C-CCCCCCEEEEECCCCccHHHHHHHHHHCCCE-EEEECCCCC--------------------CHHH
Confidence 344555666542 2 47899999999995 9999999999999985 999987532 2334
Q ss_pred hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 306 CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
..+.||+||+|+|.+.. +...+++ .| .++||+++-+
T Consensus 199 ~~~~ADIVIsavg~~~~-v~~~~ik---------~G-aiVIDvgin~ 234 (301)
T PRK14194 199 LCRQADIVVAAVGRPRL-IDADWLK---------PG-AVVIDVGINR 234 (301)
T ss_pred HHhcCCEEEEecCChhc-ccHhhcc---------CC-cEEEEecccc
Confidence 45689999999999854 4555542 13 7899998643
No 118
>PLN02494 adenosylhomocysteinase
Probab=97.88 E-value=5.9e-05 Score=81.03 Aligned_cols=93 Identities=16% Similarity=0.207 Sum_probs=67.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCcc
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
.+.|++|+|+|+|.+|+.+++.++..|+ +|+++++++.++. .+...|. .+.+ +.+.+..+|+||+||+..+
T Consensus 251 ~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~-eA~~~G~---~vv~---leEal~~ADVVI~tTGt~~- 321 (477)
T PLN02494 251 MIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICAL-QALMEGY---QVLT---LEDVVSEADIFVTTTGNKD- 321 (477)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhH-HHHhcCC---eecc---HHHHHhhCCEEEECCCCcc-
Confidence 3689999999999999999999999999 5999999987753 3434442 2222 4456778999999988764
Q ss_pred CCChhhhhcCCchhhhcCCcEEEEeccCC
Q 010322 323 LFLKDHVQDLPPVEAAVGGLRLFIDISVP 351 (513)
Q Consensus 323 vi~~~~l~~~~~~~~~~~g~~viiDlavP 351 (513)
++..+.+..+.+ + .+++.++.+
T Consensus 322 vI~~e~L~~MK~-----G--AiLiNvGr~ 343 (477)
T PLN02494 322 IIMVDHMRKMKN-----N--AIVCNIGHF 343 (477)
T ss_pred chHHHHHhcCCC-----C--CEEEEcCCC
Confidence 445677776531 2 455666553
No 119
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.88 E-value=3.6e-05 Score=74.42 Aligned_cols=76 Identities=22% Similarity=0.281 Sum_probs=55.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHH-HHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEE-RVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~-ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
++.|++|+|||+|.+|...++.|...|+ +|+|++++.. ...+++.. +. +.+....-....+.++|+||.||+.+.
T Consensus 7 ~l~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~--i~~~~~~~~~~~l~~adlViaaT~d~e 82 (202)
T PRK06718 7 DLSNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK--IRWKQKEFEPSDIVDAFLVIAATNDPR 82 (202)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC--EEEEecCCChhhcCCceEEEEcCCCHH
Confidence 5789999999999999999999999997 5999998753 33444443 21 233222112345789999999999975
Q ss_pred c
Q 010322 322 P 322 (513)
Q Consensus 322 ~ 322 (513)
-
T Consensus 83 l 83 (202)
T PRK06718 83 V 83 (202)
T ss_pred H
Confidence 4
No 120
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=97.87 E-value=0.00012 Score=66.79 Aligned_cols=97 Identities=23% Similarity=0.241 Sum_probs=70.3
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhh
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSC 306 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~ 306 (513)
+.+.+++.+. ++ -++.|++|+|+|. +..|+.++..|...|+. |++++++-. ++.+.
T Consensus 12 ~~a~~~ll~~-~~-~~~~gk~v~VvGrs~~vG~pla~lL~~~gat-V~~~~~~t~--------------------~l~~~ 68 (140)
T cd05212 12 AKAVKELLNK-EG-VRLDGKKVLVVGRSGIVGAPLQCLLQRDGAT-VYSCDWKTI--------------------QLQSK 68 (140)
T ss_pred HHHHHHHHHH-cC-CCCCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEeCCCCc--------------------CHHHH
Confidence 3344455543 33 4789999999999 77899999999989985 888875421 23445
Q ss_pred cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCCccc
Q 010322 307 AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCV 358 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v 358 (513)
++.||+||+||+++ ++|+.++++. | .+++|.+..+..++.+
T Consensus 69 v~~ADIVvsAtg~~-~~i~~~~ikp---------G-a~Vidvg~~~~~~~~~ 109 (140)
T cd05212 69 VHDADVVVVGSPKP-EKVPTEWIKP---------G-ATVINCSPTKLSGDDV 109 (140)
T ss_pred HhhCCEEEEecCCC-CccCHHHcCC---------C-CEEEEcCCCcccchhh
Confidence 67899999999999 7888888753 3 5677988766333333
No 121
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.84 E-value=3.9e-05 Score=80.72 Aligned_cols=75 Identities=28% Similarity=0.488 Sum_probs=59.1
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC-c---ceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG-V---EIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~-~---~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
++|+|||+|.+|+.++..|...|..+|++.+||.+++.+++...+. . .+.+...+.+.+.+.+.|+||+|.+...
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~ 80 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFV 80 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchh
Confidence 6899999999999999999999977899999999999887766421 1 1222233456678899999999987754
No 122
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=97.84 E-value=5.1e-05 Score=80.14 Aligned_cols=159 Identities=15% Similarity=0.209 Sum_probs=98.4
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHH----------HHHHHhHhc---------------Ccccc-----hhh
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVK----------QVVKVGQGV---------------VGFGR-----NIS 201 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk----------~A~~~a~~~---------------~~~g~-----~L~ 201 (513)
...|+|+++.+.+|++++....+|+..+..... +-++.|... +..|. ..+
T Consensus 56 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (386)
T cd08283 56 DILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYA 135 (386)
T ss_pred ccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCC
Confidence 458999999999999999989999988764321 011112110 11110 123
Q ss_pred HHHHHHHhhCcc----------cccccccc-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCC
Q 010322 202 GLFKHAISVGKR----------VRTETNIA-AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGC 270 (513)
Q Consensus 202 ~lf~~ai~v~k~----------Vr~et~i~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~ 270 (513)
+.|.+++.++.. +..+.... ..+.+++++++..+ ....|.+|+|+|+|.+|.+++..+...|+
T Consensus 136 g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~------~~~~g~~VlV~g~G~vG~~~~~la~~~g~ 209 (386)
T cd08283 136 GGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAAELA------EVKPGDTVAVWGCGPVGLFAARSAKLLGA 209 (386)
T ss_pred CeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHHhhc------cCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 455555554432 22222221 23456677765432 12468899999999999999999999998
Q ss_pred CeEEEEeCCHHHHHHHHHHhCCcceeecccc---hHH----hhc--CCCcEEEEcCCC
Q 010322 271 TKMVVVNRSEERVAAICEELNGVEIIYKPLS---EML----SCA--ADADVVFTSTAS 319 (513)
Q Consensus 271 ~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~---~~~----~~l--~~aDVVI~AT~s 319 (513)
.+|+++++++++. ++++++++. .+.... +.. +.. .+.|+||+|++.
T Consensus 210 ~~vi~~~~~~~~~-~~~~~~~~~--~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~ 264 (386)
T cd08283 210 ERVIAIDRVPERL-EMARSHLGA--ETINFEEVDDVVEALRELTGGRGPDVCIDAVGM 264 (386)
T ss_pred CEEEEEcCCHHHH-HHHHHcCCc--EEEcCCcchHHHHHHHHHcCCCCCCEEEECCCC
Confidence 7799999998887 556666332 222221 122 222 268999999875
No 123
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=97.83 E-value=0.00014 Score=74.98 Aligned_cols=161 Identities=24% Similarity=0.315 Sum_probs=98.8
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhc---------hHHHHH-HHhHhcCcccchhhHHHHHHHhhCc--------cc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILA---------QVKQVV-KVGQGVVGFGRNISGLFKHAISVGK--------RV 214 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlg---------Qvk~A~-~~a~~~~~~g~~L~~lf~~ai~v~k--------~V 214 (513)
..|+|+++.+..+++++..+-+|+..+.- +++..+ ..+...+..|...++.|+++..++. .+
T Consensus 55 ~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~ 134 (343)
T cd08236 55 VLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHV 134 (343)
T ss_pred ccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCC
Confidence 46999999999999999888999987652 111111 1111111122222345555444443 22
Q ss_pred cccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcc
Q 010322 215 RTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVE 294 (513)
Q Consensus 215 r~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~ 294 (513)
..+.+....+..+++.++..+ ....+.+|+|.|+|.+|.++++.++..|+..|+++.++.++.+. ...++..
T Consensus 135 ~~~~aa~~~~~~ta~~~l~~~------~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~-l~~~g~~- 206 (343)
T cd08236 135 DYEEAAMIEPAAVALHAVRLA------GITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAV-ARELGAD- 206 (343)
T ss_pred CHHHHHhcchHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH-HHHcCCC-
Confidence 222222224555666665432 12368899999999999999999999999769999998887754 4566632
Q ss_pred eeeccc-----chHHhhcC--CCcEEEEcCCCCcc
Q 010322 295 IIYKPL-----SEMLSCAA--DADVVFTSTASEAP 322 (513)
Q Consensus 295 ~~~~~~-----~~~~~~l~--~aDVVI~AT~s~~~ 322 (513)
.+... ..+..... ++|++++|++....
T Consensus 207 -~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~ 240 (343)
T cd08236 207 -DTINPKEEDVEKVRELTEGRGADLVIEAAGSPAT 240 (343)
T ss_pred -EEecCccccHHHHHHHhCCCCCCEEEECCCCHHH
Confidence 22221 12222332 49999999876533
No 124
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=97.83 E-value=6.1e-05 Score=77.34 Aligned_cols=179 Identities=15% Similarity=0.246 Sum_probs=104.6
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH-----------HHHHHHhHhcCcccchhhHHHHHHHhhCc--------c
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV-----------KQVVKVGQGVVGFGRNISGLFKHAISVGK--------R 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv-----------k~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~ 213 (513)
..|+|+++.+.++++++...-+|++.+.... ......|......|...++.|++++.++. .
T Consensus 56 ~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~ 135 (338)
T PRK09422 56 ILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEG 135 (338)
T ss_pred cCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCC
Confidence 4699999999999999988889998875211 01112222221112222455555544443 2
Q ss_pred ccccccccC-CCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhC
Q 010322 214 VRTETNIAA-GAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVA-KGCTKMVVVNRSEERVAAICEELN 291 (513)
Q Consensus 214 Vr~et~i~~-~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~-~G~~~V~v~nRs~~ra~~la~~~g 291 (513)
+........ .+...+++++..+ ....|.+|+|.|+|++|.++++.++. .|+. |+++.++.++. ++++++|
T Consensus 136 ~~~~~aa~l~~~~~ta~~~~~~~------~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~-v~~~~~~~~~~-~~~~~~g 207 (338)
T PRK09422 136 LDPAQASSITCAGVTTYKAIKVS------GIKPGQWIAIYGAGGLGNLALQYAKNVFNAK-VIAVDINDDKL-ALAKEVG 207 (338)
T ss_pred CCHHHeehhhcchhHHHHHHHhc------CCCCCCEEEEECCcHHHHHHHHHHHHhCCCe-EEEEeCChHHH-HHHHHcC
Confidence 222222211 2334456665433 23468999999999999999999997 4884 88999998887 4457777
Q ss_pred Ccceeeccc--ch----HHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 292 GVEIIYKPL--SE----MLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 292 ~~~~~~~~~--~~----~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
.. ..+... .+ +.+...+.|++|.+++++..+ .+.++.+. .+|..+.++
T Consensus 208 ~~-~v~~~~~~~~~~~~v~~~~~~~d~vi~~~~~~~~~--~~~~~~l~-----~~G~~v~~g 261 (338)
T PRK09422 208 AD-LTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAF--NQAVDAVR-----AGGRVVAVG 261 (338)
T ss_pred Cc-EEecccccccHHHHHHHhcCCCcEEEEeCCCHHHH--HHHHHhcc-----CCCEEEEEe
Confidence 42 122111 11 222334688666666655443 44555443 356555555
No 125
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=97.82 E-value=0.00015 Score=74.81 Aligned_cols=179 Identities=18% Similarity=0.321 Sum_probs=102.3
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhch----------HHHHHHHhHhcCcccchhhHHHHHHHhh--------Cccc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQ----------VKQVVKVGQGVVGFGRNISGLFKHAISV--------GKRV 214 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQ----------vk~A~~~a~~~~~~g~~L~~lf~~ai~v--------~k~V 214 (513)
..|+|+++.+..|+++++...+|+..+... .....+.|.+...+|...++.+++++.+ +..+
T Consensus 58 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~ 137 (340)
T TIGR00692 58 VVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSI 137 (340)
T ss_pred ccccceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCC
Confidence 469999999999999998899999887621 0111222322211111112334433333 3322
Q ss_pred cccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcc
Q 010322 215 RTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVE 294 (513)
Q Consensus 215 r~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~ 294 (513)
..+......+.+.+++++ +. ....|.+|+|.|+|.+|.++++.++..|++.|+++++++++. +++++++..
T Consensus 138 ~~~~a~~~~~~~~a~~~~-~~------~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~-~~~~~~g~~- 208 (340)
T TIGR00692 138 PPEYATIQEPLGNAVHTV-LA------GPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRL-ELAKKMGAT- 208 (340)
T ss_pred ChHhhhhcchHHHHHHHH-Hc------cCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHhCCc-
Confidence 222221122333444432 11 124789999999999999999999999987688887777776 566677642
Q ss_pred eeeccc-ch----HHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 295 IIYKPL-SE----MLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 295 ~~~~~~-~~----~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
..+... .+ +.+.. .+.|+|++|+++...+ .+.+..+. ++|..+.++
T Consensus 209 ~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g~~~~~--~~~~~~l~-----~~g~~v~~g 261 (340)
T TIGR00692 209 YVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKAL--EQGLQAVT-----PGGRVSLLG 261 (340)
T ss_pred EEEcccccCHHHHHHHhcCCCCCCEEEECCCCHHHH--HHHHHhhc-----CCCEEEEEc
Confidence 112111 11 22222 4689999998765332 23344432 356555554
No 126
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.81 E-value=7.1e-05 Score=76.31 Aligned_cols=90 Identities=19% Similarity=0.312 Sum_probs=66.5
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEc-ccHHHHHHHHHHHHcCCCeEEEEe-CCHHHHHHHHHHhCCcceeecccchHHh
Q 010322 228 SSAAVELALMKLPESSHATARMLVIG-AGKMGKLVIKHLVAKGCTKMVVVN-RSEERVAAICEELNGVEIIYKPLSEMLS 305 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIG-aG~mG~~ia~~L~~~G~~~V~v~n-Rs~~ra~~la~~~g~~~~~~~~~~~~~~ 305 (513)
+.+.+++.+.. + .++.|++|+||| .|-||..++..|...|+. |++++ ||.. +.+
T Consensus 142 p~ai~~ll~~~-~-i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~t-Vtv~~~rT~~---------------------l~e 197 (296)
T PRK14188 142 PLGCMMLLRRV-H-GDLSGLNAVVIGRSNLVGKPMAQLLLAANAT-VTIAHSRTRD---------------------LPA 197 (296)
T ss_pred HHHHHHHHHHh-C-CCCCCCEEEEEcCCcchHHHHHHHHHhCCCE-EEEECCCCCC---------------------HHH
Confidence 44555666543 2 478999999999 799999999999999985 99994 7741 233
Q ss_pred hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 306 CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
.++.+|+||+|++.+.. +...++. .| .++||+++-+
T Consensus 198 ~~~~ADIVIsavg~~~~-v~~~~lk---------~G-avVIDvGin~ 233 (296)
T PRK14188 198 VCRRADILVAAVGRPEM-VKGDWIK---------PG-ATVIDVGINR 233 (296)
T ss_pred HHhcCCEEEEecCChhh-cchheec---------CC-CEEEEcCCcc
Confidence 45679999999999874 4444432 13 6899998644
No 127
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=97.81 E-value=4.3e-05 Score=80.01 Aligned_cols=183 Identities=15% Similarity=0.188 Sum_probs=104.8
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchH---HH-------HHHHhHhcCcc---cch------------------h
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQV---KQ-------VVKVGQGVVGF---GRN------------------I 200 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQv---k~-------A~~~a~~~~~~---g~~------------------L 200 (513)
...|||+++.+.+|++++....+|+..+.... .. ..+.|...... |.. .
T Consensus 55 ~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 134 (365)
T cd05279 55 VILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLG 134 (365)
T ss_pred cccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccc
Confidence 35799999999999999988889998875321 00 11112111000 100 1
Q ss_pred hHHHHHHHhhCcc----ccccccc----cC-CCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCC
Q 010322 201 SGLFKHAISVGKR----VRTETNI----AA-GAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCT 271 (513)
Q Consensus 201 ~~lf~~ai~v~k~----Vr~et~i----~~-~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~ 271 (513)
.+.|++++.++.. ++..... .. .+...++.++.. .. ....|.+|+|.|+|++|.+++..++..|+.
T Consensus 135 ~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~---~~--~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~ 209 (365)
T cd05279 135 TSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVN---TA--KVTPGSTCAVFGLGGVGLSVIMGCKAAGAS 209 (365)
T ss_pred cccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHh---cc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 2355666555442 1211111 11 123333433211 11 234689999999999999999999999998
Q ss_pred eEEEEeCCHHHHHHHHHHhCCcceeecccc----hH----Hhh-cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCc
Q 010322 272 KMVVVNRSEERVAAICEELNGVEIIYKPLS----EM----LSC-AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGL 342 (513)
Q Consensus 272 ~V~v~nRs~~ra~~la~~~g~~~~~~~~~~----~~----~~~-l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~ 342 (513)
.|++++++.++. +++.++|.. .+.... +. .+. -.++|+||++++.+..+ ...++.+.+ .+|.
T Consensus 210 ~v~~~~~~~~~~-~~~~~~g~~--~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~--~~~~~~l~~----~~G~ 280 (365)
T cd05279 210 RIIAVDINKDKF-EKAKQLGAT--ECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTL--KQALDATRL----GGGT 280 (365)
T ss_pred eEEEEeCCHHHH-HHHHHhCCC--eecccccccchHHHHHHHHhCCCCcEEEECCCCHHHH--HHHHHHhcc----CCCE
Confidence 788899998887 555777742 122111 11 111 14699999999864433 233444320 2465
Q ss_pred EEEEec
Q 010322 343 RLFIDI 348 (513)
Q Consensus 343 ~viiDl 348 (513)
.+.++.
T Consensus 281 ~v~~g~ 286 (365)
T cd05279 281 SVVVGV 286 (365)
T ss_pred EEEEec
Confidence 665554
No 128
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=97.79 E-value=0.00013 Score=75.07 Aligned_cols=157 Identities=20% Similarity=0.233 Sum_probs=95.2
Q ss_pred hcCCceeeeeeeeccCCCC-cccCcchhhchHHHHHHHhHh--cCcccchhhHHHHHHHhhCc--------ccccccccc
Q 010322 153 LYNKDATQHLFEVSAGLDS-LVLGEGQILAQVKQVVKVGQG--VVGFGRNISGLFKHAISVGK--------RVRTETNIA 221 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS-~vvGE~qIlgQvk~A~~~a~~--~~~~g~~L~~lf~~ai~v~k--------~Vr~et~i~ 221 (513)
..|+|+++.+.+|++++++ ..+|+....-..-. ...|.. .|..+ ..++.|++++.++. .+..+....
T Consensus 66 ~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~-~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~ 143 (341)
T cd08262 66 VLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLL-CGQGASCGIGLSP-EAPGGYAEYMLLSEALLLRVPDGLSMEDAAL 143 (341)
T ss_pred ccccceeEEEEEeCCCCcCCCCCCCEEEecCCcC-CCCChhhhCCCCc-CCCCceeeeEEechHHeEECCCCCCHHHhhh
Confidence 4699999999999999987 88999876531100 001111 11111 12345555554443 222222222
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc
Q 010322 222 AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS 301 (513)
Q Consensus 222 ~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~ 301 (513)
..+.++++.++..+ .-..|.+|+|.|+|.+|.++++.++..|+..++++++++++. .++.+++.. .+....
T Consensus 144 ~~~~~~a~~~~~~~------~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~-~~~~~~g~~--~~i~~~ 214 (341)
T cd08262 144 TEPLAVGLHAVRRA------RLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERR-ALALAMGAD--IVVDPA 214 (341)
T ss_pred hhhHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHcCCc--EEEcCC
Confidence 23444555543322 124689999999999999999999999998788888888777 566777642 122211
Q ss_pred ------h---HHhhc--CCCcEEEEcCCCC
Q 010322 302 ------E---MLSCA--ADADVVFTSTASE 320 (513)
Q Consensus 302 ------~---~~~~l--~~aDVVI~AT~s~ 320 (513)
+ ..... .+.|+||++++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~ 244 (341)
T cd08262 215 ADSPFAAWAAELARAGGPKPAVIFECVGAP 244 (341)
T ss_pred CcCHHHHHHHHHHHhCCCCCCEEEECCCCH
Confidence 1 11111 3589999998874
No 129
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.79 E-value=6.2e-05 Score=77.03 Aligned_cols=69 Identities=22% Similarity=0.352 Sum_probs=53.9
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
+|.|||+|.||..++..|...|. +|+++||++++.+.+.+. +.. .....+++.+.+..+|+||.|++.+
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~-g~~--~~~s~~~~~~~~~~~dvIi~~vp~~ 70 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKED-RTT--GVANLRELSQRLSAPRVVWVMVPHG 70 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHc-CCc--ccCCHHHHHhhcCCCCEEEEEcCch
Confidence 69999999999999999999997 599999999998877753 321 1222334445566789999999886
No 130
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.78 E-value=6.2e-05 Score=72.73 Aligned_cols=78 Identities=21% Similarity=0.338 Sum_probs=57.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCC-------------------HHHHHHHHHHhCC----cceeec--
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRS-------------------EERVAAICEELNG----VEIIYK-- 298 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs-------------------~~ra~~la~~~g~----~~~~~~-- 298 (513)
+.+.+|+|+|+|++|..+++.|...|+.+++++|.+ ..|++.+++.+.. ..+...
T Consensus 19 l~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~ 98 (202)
T TIGR02356 19 LLNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKE 98 (202)
T ss_pred hcCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehh
Confidence 578999999999999999999999999999999986 2355555555431 111111
Q ss_pred --ccchHHhhcCCCcEEEEcCCCCc
Q 010322 299 --PLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 299 --~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
..+++.+.+.++|+||+|+.+..
T Consensus 99 ~i~~~~~~~~~~~~D~Vi~~~d~~~ 123 (202)
T TIGR02356 99 RVTAENLELLINNVDLVLDCTDNFA 123 (202)
T ss_pred cCCHHHHHHHHhCCCEEEECCCCHH
Confidence 11234566789999999997754
No 131
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=97.78 E-value=0.00012 Score=77.37 Aligned_cols=136 Identities=18% Similarity=0.171 Sum_probs=84.3
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHHH----------HHHHhHhcCcccc-hhhHHHHHHHhhCcc-------
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQ----------VVKVGQGVVGFGR-NISGLFKHAISVGKR------- 213 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~----------A~~~a~~~~~~g~-~L~~lf~~ai~v~k~------- 213 (513)
...|||+++.+.+++++++.+.+|+..+...... -+..|......|. ..++.|++++.++..
T Consensus 83 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~ 162 (393)
T cd08246 83 HIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPK 162 (393)
T ss_pred cccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCC
Confidence 3569999999999999999889999987643110 1111111111111 123566665555432
Q ss_pred -ccccccc-cCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh
Q 010322 214 -VRTETNI-AAGAVSVSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL 290 (513)
Q Consensus 214 -Vr~et~i-~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~ 290 (513)
+..+... ...+.+.+++++..... . ....+.+|+|.|+ |.+|.+++..++..|++ ++++.+++++. ++++++
T Consensus 163 ~l~~~~aa~l~~~~~tA~~al~~~~~-~--~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~-vv~~~~s~~~~-~~~~~~ 237 (393)
T cd08246 163 HLSWEEAAAYMLVGATAYRMLFGWNP-N--TVKPGDNVLIWGASGGLGSMAIQLARAAGAN-PVAVVSSEEKA-EYCRAL 237 (393)
T ss_pred CCCHHHHhhhcccHHHHHHHHhhccc-c--cCCCCCEEEEECCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHH-HHHHHc
Confidence 2211111 12344555655432110 0 2346889999997 99999999999999996 66778888887 556678
Q ss_pred CC
Q 010322 291 NG 292 (513)
Q Consensus 291 g~ 292 (513)
|.
T Consensus 238 G~ 239 (393)
T cd08246 238 GA 239 (393)
T ss_pred CC
Confidence 74
No 132
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=97.76 E-value=0.00014 Score=75.04 Aligned_cols=180 Identities=16% Similarity=0.181 Sum_probs=104.0
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH-----------HHHHHHhHhcCc-------ccchhhHHHHHHHhhCcc-
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV-----------KQVVKVGQGVVG-------FGRNISGLFKHAISVGKR- 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv-----------k~A~~~a~~~~~-------~g~~L~~lf~~ai~v~k~- 213 (513)
..|||+++.+..+++++..+-+|+..+...+ .+..+.|..... .+...++.|++++.++..
T Consensus 56 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~ 135 (337)
T cd05283 56 VPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERF 135 (337)
T ss_pred ccCcceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhh
Confidence 5699999999999999999999998863211 011222211110 011224555555555442
Q ss_pred ---cccccccc-CCCchH----HHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 010322 214 ---VRTETNIA-AGAVSV----SSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAA 285 (513)
Q Consensus 214 ---Vr~et~i~-~~~~Sv----a~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~ 285 (513)
++...... ..++++ ++.++.. + ....|.+|+|.|+|.+|.++++.++..|+ +|+++.++.++. +
T Consensus 136 ~~~lp~~~~~~~aa~l~~~~~ta~~~~~~----~--~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~-~ 207 (337)
T cd05283 136 VFKIPEGLDSAAAAPLLCAGITVYSPLKR----N--GVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKK-E 207 (337)
T ss_pred eEECCCCCCHHHhhhhhhHHHHHHHHHHh----c--CCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHH-H
Confidence 11111110 112222 2333322 2 23468899999999999999999999999 588999988877 4
Q ss_pred HHHHhCCcceeecccc-hH-HhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 286 ICEELNGVEIIYKPLS-EM-LSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 286 la~~~g~~~~~~~~~~-~~-~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
++..++.. ..+.... +. ...-.++|+||+|++....+ .+.++.+. .+|..+.++.
T Consensus 208 ~~~~~g~~-~vi~~~~~~~~~~~~~~~d~v~~~~g~~~~~--~~~~~~l~-----~~G~~v~~g~ 264 (337)
T cd05283 208 DALKLGAD-EFIATKDPEAMKKAAGSLDLIIDTVSASHDL--DPYLSLLK-----PGGTLVLVGA 264 (337)
T ss_pred HHHHcCCc-EEecCcchhhhhhccCCceEEEECCCCcchH--HHHHHHhc-----CCCEEEEEec
Confidence 45667642 1122111 11 12235789999999986422 34444433 2455555543
No 133
>PRK07574 formate dehydrogenase; Provisional
Probab=97.75 E-value=8.2e-05 Score=78.69 Aligned_cols=93 Identities=17% Similarity=0.187 Sum_probs=69.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc-
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA- 321 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~- 321 (513)
.+.|++|+|||.|.||+.+++.|+..|++ |.++||+.... .....++. . ...++.+.+..+|+|+.+++...
T Consensus 189 ~L~gktVGIvG~G~IG~~vA~~l~~fG~~-V~~~dr~~~~~-~~~~~~g~---~--~~~~l~ell~~aDvV~l~lPlt~~ 261 (385)
T PRK07574 189 DLEGMTVGIVGAGRIGLAVLRRLKPFDVK-LHYTDRHRLPE-EVEQELGL---T--YHVSFDSLVSVCDVVTIHCPLHPE 261 (385)
T ss_pred ecCCCEEEEECCCHHHHHHHHHHHhCCCE-EEEECCCCCch-hhHhhcCc---e--ecCCHHHHhhcCCEEEEcCCCCHH
Confidence 46899999999999999999999999994 99999986322 33333331 1 23457777899999999988653
Q ss_pred --cCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 322 --PLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 322 --~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
.+|+.+.+..+. ...++|+.+
T Consensus 262 T~~li~~~~l~~mk-------~ga~lIN~a 284 (385)
T PRK07574 262 TEHLFDADVLSRMK-------RGSYLVNTA 284 (385)
T ss_pred HHHHhCHHHHhcCC-------CCcEEEECC
Confidence 467777776653 226888876
No 134
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=97.74 E-value=8.9e-05 Score=75.77 Aligned_cols=68 Identities=25% Similarity=0.410 Sum_probs=54.8
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
.+|.|||+|.||..++..|...|. +|+++||++++.+.+.+. +. . ...+..+.+.++|+||.|++.+.
T Consensus 2 ~~Ig~IGlG~mG~~mA~~l~~~G~-~V~v~d~~~~~~~~~~~~-g~---~--~~~s~~~~~~~aDvVi~~vp~~~ 69 (296)
T PRK15461 2 AAIAFIGLGQMGSPMASNLLKQGH-QLQVFDVNPQAVDALVDK-GA---T--PAASPAQAAAGAEFVITMLPNGD 69 (296)
T ss_pred CeEEEEeeCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHc-CC---c--ccCCHHHHHhcCCEEEEecCCHH
Confidence 379999999999999999999997 599999999998777653 32 1 22344556789999999999875
No 135
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=97.74 E-value=0.00012 Score=74.69 Aligned_cols=156 Identities=19% Similarity=0.227 Sum_probs=89.8
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhch------HH----HHHHHhHhcCcccc-hhhHHHHHHHhhCc--------c
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQ------VK----QVVKVGQGVVGFGR-NISGLFKHAISVGK--------R 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQ------vk----~A~~~a~~~~~~g~-~L~~lf~~ai~v~k--------~ 213 (513)
..|+|+++.+.+++++ ..+|+.+.... +. ..+..+......+. ..++.+++++.++. .
T Consensus 53 ~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~ 129 (319)
T cd08242 53 VPGHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDL 129 (319)
T ss_pred ccCceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCC
Confidence 5699999999999987 34787765311 10 01111111111111 11344555444443 2
Q ss_pred ccccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc
Q 010322 214 VRTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV 293 (513)
Q Consensus 214 Vr~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~ 293 (513)
+..+......+.+.++++++.. .-..+.+|+|.|+|.+|.++++.++..|++ |+++.+++++. ++++++|..
T Consensus 130 ~~~~~aa~~~~~~~~~~~~~~~------~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~-vi~~~~~~~~~-~~~~~~g~~ 201 (319)
T cd08242 130 VPDEQAVFAEPLAAALEILEQV------PITPGDKVAVLGDGKLGLLIAQVLALTGPD-VVLVGRHSEKL-ALARRLGVE 201 (319)
T ss_pred CCHHHhhhhhHHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHH-HHHHHcCCc
Confidence 2222111113344344333221 234689999999999999999999999997 88888888887 455567742
Q ss_pred ceeecccchHHhhcCCCcEEEEcCCCCcc
Q 010322 294 EIIYKPLSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 294 ~~~~~~~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
....+.+. ..-.++|++|+|++....
T Consensus 202 --~~~~~~~~-~~~~~~d~vid~~g~~~~ 227 (319)
T cd08242 202 --TVLPDEAE-SEGGGFDVVVEATGSPSG 227 (319)
T ss_pred --EEeCcccc-ccCCCCCEEEECCCChHH
Confidence 11222221 112469999999987443
No 136
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=97.74 E-value=5.5e-05 Score=76.08 Aligned_cols=73 Identities=23% Similarity=0.393 Sum_probs=60.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCccC
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPL 323 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~v 323 (513)
....+|.+||.|.||..++.+|...|++ |+|+||+.++.+.|.+. |+ . ..+...+..+.+|+||++.+.+..+
T Consensus 33 ~s~~~iGFIGLG~MG~~M~~nLik~G~k-VtV~dr~~~k~~~f~~~-Ga---~--v~~sPaeVae~sDvvitmv~~~~~v 105 (327)
T KOG0409|consen 33 PSKTRIGFIGLGNMGSAMVSNLIKAGYK-VTVYDRTKDKCKEFQEA-GA---R--VANSPAEVAEDSDVVITMVPNPKDV 105 (327)
T ss_pred cccceeeEEeeccchHHHHHHHHHcCCE-EEEEeCcHHHHHHHHHh-ch---h--hhCCHHHHHhhcCEEEEEcCChHhh
Confidence 3578899999999999999999999995 99999999999888875 32 1 2345566678999999999998654
No 137
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=97.73 E-value=7.3e-05 Score=81.43 Aligned_cols=74 Identities=19% Similarity=0.272 Sum_probs=56.6
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh---CCcceeecccchHHhh---cCCCcEEEEcCCCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL---NGVEIIYKPLSEMLSC---AADADVVFTSTASE 320 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~---g~~~~~~~~~~~~~~~---l~~aDVVI~AT~s~ 320 (513)
.+|.+||.|.||..++.+|...|.. |+|+||++++.+.+.+.. |.. .+...+++.+. ++.+|+||.|.+.+
T Consensus 7 ~~IG~IGLG~MG~~mA~nL~~~G~~-V~V~NRt~~k~~~l~~~~~~~Ga~--~~~~a~s~~e~v~~l~~~dvIi~~v~~~ 83 (493)
T PLN02350 7 SRIGLAGLAVMGQNLALNIAEKGFP-ISVYNRTTSKVDETVERAKKEGNL--PLYGFKDPEDFVLSIQKPRSVIILVKAG 83 (493)
T ss_pred CCEEEEeeHHHHHHHHHHHHhCCCe-EEEECCCHHHHHHHHHhhhhcCCc--ccccCCCHHHHHhcCCCCCEEEEECCCc
Confidence 4699999999999999999999984 999999999998887642 221 11223344444 44599999999988
Q ss_pred ccC
Q 010322 321 APL 323 (513)
Q Consensus 321 ~~v 323 (513)
.++
T Consensus 84 ~aV 86 (493)
T PLN02350 84 APV 86 (493)
T ss_pred HHH
Confidence 765
No 138
>PLN03139 formate dehydrogenase; Provisional
Probab=97.71 E-value=9.9e-05 Score=78.08 Aligned_cols=93 Identities=17% Similarity=0.294 Sum_probs=68.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc-
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA- 321 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~- 321 (513)
.+.|++|+|||.|.||+.+++.|...|++ |.+++|+.... +.....+. . ..+++.+.+..+|+|+.+++...
T Consensus 196 ~L~gktVGIVG~G~IG~~vA~~L~afG~~-V~~~d~~~~~~-~~~~~~g~---~--~~~~l~ell~~sDvV~l~lPlt~~ 268 (386)
T PLN03139 196 DLEGKTVGTVGAGRIGRLLLQRLKPFNCN-LLYHDRLKMDP-ELEKETGA---K--FEEDLDAMLPKCDVVVINTPLTEK 268 (386)
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHHCCCE-EEEECCCCcch-hhHhhcCc---e--ecCCHHHHHhhCCEEEEeCCCCHH
Confidence 57899999999999999999999999995 89999985333 22333331 1 23467777889999999988643
Q ss_pred --cCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 322 --PLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 322 --~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
.+|+.+.+..+. ...++|+.+
T Consensus 269 T~~li~~~~l~~mk-------~ga~lIN~a 291 (386)
T PLN03139 269 TRGMFNKERIAKMK-------KGVLIVNNA 291 (386)
T ss_pred HHHHhCHHHHhhCC-------CCeEEEECC
Confidence 466776666653 226777765
No 139
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=97.71 E-value=0.00014 Score=74.85 Aligned_cols=179 Identities=22% Similarity=0.271 Sum_probs=105.1
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhch------HHHH---H-HHhHhcCcccchhhHHHHHHHhhCcc---------
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQ------VKQV---V-KVGQGVVGFGRNISGLFKHAISVGKR--------- 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQ------vk~A---~-~~a~~~~~~g~~L~~lf~~ai~v~k~--------- 213 (513)
..|+|+++.+.++++++..+.+|+..+.-. +-.. | ..|.....+|...++.|++++.++..
T Consensus 56 ~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~ 135 (343)
T cd08235 56 ILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLK 135 (343)
T ss_pred ccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEE
Confidence 569999999999999998888999887531 0000 0 01111111122234556665555432
Q ss_pred ----ccccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHH
Q 010322 214 ----VRTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEE 289 (513)
Q Consensus 214 ----Vr~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~ 289 (513)
+..+......+.+.+++++... .-..|.+|+|.|+|.+|.++++.++..|++.|+++.+++++...+ ..
T Consensus 136 lP~~~~~~~aa~~~~~~~a~~~l~~~------~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~-~~ 208 (343)
T cd08235 136 LPDNVSFEEAALVEPLACCINAQRKA------GIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFA-KK 208 (343)
T ss_pred CCCCCCHHHHHhhhHHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HH
Confidence 1211221223445555554322 124689999999999999999999999987588888888888554 56
Q ss_pred hCCcceeecccc------hHHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 290 LNGVEIIYKPLS------EMLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 290 ~g~~~~~~~~~~------~~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
++.. .+.+.. .+.... .++|+||+|++.+..+ ...++.+. .+|+.+.++
T Consensus 209 ~g~~--~~~~~~~~~~~~~i~~~~~~~~vd~vld~~~~~~~~--~~~~~~l~-----~~g~~v~~~ 265 (343)
T cd08235 209 LGAD--YTIDAAEEDLVEKVRELTDGRGADVVIVATGSPEAQ--AQALELVR-----KGGRILFFG 265 (343)
T ss_pred hCCc--EEecCCccCHHHHHHHHhCCcCCCEEEECCCChHHH--HHHHHHhh-----cCCEEEEEe
Confidence 6631 222221 122222 2589999998865332 23344332 245555554
No 140
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=97.70 E-value=0.0013 Score=67.67 Aligned_cols=188 Identities=19% Similarity=0.242 Sum_probs=105.7
Q ss_pred HHHHHHHHHHhcCCCh--------hhhhhHHHHhcCCceeeeeeeeccCCCCcccCc-chhhchHHHHHHHhHhcCcccc
Q 010322 128 VKEVTEWMSKTSGIPV--------AELCEHRFLLYNKDATQHLFEVSAGLDSLVLGE-GQILAQVKQVVKVGQGVVGFGR 198 (513)
Q Consensus 128 ~~~~~~~l~~~~~~~~--------~~~~~~~~~~~G~eav~hlf~V~sGldS~vvGE-~qIlgQvk~A~~~a~~~~~~g~ 198 (513)
.+.+..+|....|++. ++...++-....++ -.-+..=|+.+...+.-+ ++.+ .++....+.-++|.
T Consensus 83 qD~vaaAl~~~~GipVfA~kGe~~eeY~~~~~~vl~~~-p~iiiDDG~D~~~~vh~~~~~l~----~~i~G~tEETTTGV 157 (420)
T COG0499 83 QDDVAAALAAKEGIPVFAWKGETLEEYYEAIDQVLDWE-PNIIIDDGGDLTKLVHLERPELL----DAIKGGTEETTTGV 157 (420)
T ss_pred cHHHHHHHhhccCceEEEEcCCCHHHHHHHHHHHhCcC-CCEEEecCcceeeeeecccHHHH----HHhcCCCcccchHH
Confidence 4567788866656653 33333333333332 222333333333444333 2222 33444444455553
Q ss_pred hhhHHHHHH----HhhCcc-ccc-cc-cccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCC
Q 010322 199 NISGLFKHA----ISVGKR-VRT-ET-NIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCT 271 (513)
Q Consensus 199 ~L~~lf~~a----i~v~k~-Vr~-et-~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~ 271 (513)
++|.+.. +++|.- |.+ -| ....|..+++.-+++-..+... --+.||+|+|.|.|-.|+.+|..|+..|+.
T Consensus 158 --~RL~am~~~G~L~fPai~VNDs~tK~~FDNrYGtgqS~~DgI~RaTn-~liaGK~vVV~GYG~vGrG~A~~~rg~GA~ 234 (420)
T COG0499 158 --HRLRAMEKDGVLKFPAINVNDSVTKSLFDNRYGTGQSLLDGILRATN-VLLAGKNVVVAGYGWVGRGIAMRLRGMGAR 234 (420)
T ss_pred --HHHHHHHhcCCcccceEeecchhhhcccccccccchhHHHHHHhhhc-eeecCceEEEecccccchHHHHHhhcCCCe
Confidence 3444333 444431 111 11 1233444444433332222111 126899999999999999999999999995
Q ss_pred eEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCccCCChhhhhcC
Q 010322 272 KMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDL 332 (513)
Q Consensus 272 ~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~ 332 (513)
|.|+.-+|-++-+ ..+.+ +.+.+. .++...+||+|+|||..+ +++.+++..+
T Consensus 235 -ViVtEvDPI~Ale--A~MdG--f~V~~m---~~Aa~~gDifiT~TGnkd-Vi~~eh~~~M 286 (420)
T COG0499 235 -VIVTEVDPIRALE--AAMDG--FRVMTM---EEAAKTGDIFVTATGNKD-VIRKEHFEKM 286 (420)
T ss_pred -EEEEecCchHHHH--HhhcC--cEEEEh---HHhhhcCCEEEEccCCcC-ccCHHHHHhc
Confidence 9999999887633 33333 355544 445568899999999975 4677888765
No 141
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.70 E-value=0.00029 Score=70.94 Aligned_cols=168 Identities=18% Similarity=0.145 Sum_probs=100.1
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccC-CCchHHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAA-GAVSVSSAA 231 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~-~~~Sva~~A 231 (513)
..|+|+++.+.+++++...+.+|+..+... ..|..+.++.---...+.++..+..+..... .+...++.+
T Consensus 54 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~---------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~ 124 (305)
T cd08270 54 VPGWDAAGVVERAAADGSGPAVGARVVGLG---------AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRA 124 (305)
T ss_pred cccceeEEEEEEeCCCCCCCCCCCEEEEec---------CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHH
Confidence 479999999999999988888899876421 1122222211111123333333322222111 122234444
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCC
Q 010322 232 VELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADA 310 (513)
Q Consensus 232 v~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~a 310 (513)
+... ....|.+|+|.|+ |.+|..++..++..|++ |+.+.++.++. ++++++|.. ..+....+... .+.
T Consensus 125 ~~~~------~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~-~~~~~~g~~-~~~~~~~~~~~--~~~ 193 (305)
T cd08270 125 LRRG------GPLLGRRVLVTGASGGVGRFAVQLAALAGAH-VVAVVGSPARA-EGLRELGAA-EVVVGGSELSG--APV 193 (305)
T ss_pred HHHh------CCCCCCEEEEECCCcHHHHHHHHHHHHcCCE-EEEEeCCHHHH-HHHHHcCCc-EEEeccccccC--CCc
Confidence 3322 2346899999999 99999999999999984 88889998887 445557642 12222222221 368
Q ss_pred cEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 311 DVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 311 DVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
|++++++++. .+ ...++.+. .+|..+.++.
T Consensus 194 d~vl~~~g~~-~~--~~~~~~l~-----~~G~~v~~g~ 223 (305)
T cd08270 194 DLVVDSVGGP-QL--ARALELLA-----PGGTVVSVGS 223 (305)
T ss_pred eEEEECCCcH-HH--HHHHHHhc-----CCCEEEEEec
Confidence 9999999875 22 34455443 3565666653
No 142
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.69 E-value=0.00013 Score=75.91 Aligned_cols=89 Identities=13% Similarity=0.216 Sum_probs=66.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc-
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA- 321 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~- 321 (513)
.+.|++|+|||+|.||+.+++.|...|. +|++++|++.....+. . ...++.+.+.++|+|+.+++...
T Consensus 143 ~l~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~~--------~--~~~~l~ell~~aDiVil~lP~t~~ 211 (330)
T PRK12480 143 PVKNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDFL--------T--YKDSVKEAIKDADIISLHVPANKE 211 (330)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhhh--------h--ccCCHHHHHhcCCEEEEeCCCcHH
Confidence 4688999999999999999999999998 5999999875432110 1 12356677889999999999874
Q ss_pred --cCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 322 --PLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 322 --~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
.++..+.+..+. ...++|+.+
T Consensus 212 t~~li~~~~l~~mk-------~gavlIN~a 234 (330)
T PRK12480 212 SYHLFDKAMFDHVK-------KGAILVNAA 234 (330)
T ss_pred HHHHHhHHHHhcCC-------CCcEEEEcC
Confidence 455555555542 236888876
No 143
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.68 E-value=0.00011 Score=70.67 Aligned_cols=94 Identities=23% Similarity=0.282 Sum_probs=64.6
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeC-CHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCccCCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNR-SEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFL 325 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nR-s~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~ 325 (513)
++++|+|+|.||..++..|...|.+ |++.+| .+++.+..++.++. .+.. .+..++.+.+||||.|++-....=.
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag~e-V~igs~r~~~~~~a~a~~l~~---~i~~-~~~~dA~~~aDVVvLAVP~~a~~~v 76 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAGHE-VIIGSSRGPKALAAAAAALGP---LITG-GSNEDAAALADVVVLAVPFEAIPDV 76 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCCCe-EEEecCCChhHHHHHHHhhcc---cccc-CChHHHHhcCCEEEEeccHHHHHhH
Confidence 5799999999999999999999985 777755 45555566666553 2222 3445667889999999988654211
Q ss_pred hhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 326 KDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 326 ~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
...+... -+..++||..+|-
T Consensus 77 ~~~l~~~-------~~~KIvID~tnp~ 96 (211)
T COG2085 77 LAELRDA-------LGGKIVIDATNPI 96 (211)
T ss_pred HHHHHHH-------hCCeEEEecCCCc
Confidence 1222221 1348999998873
No 144
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=97.67 E-value=9.9e-05 Score=68.32 Aligned_cols=73 Identities=26% Similarity=0.460 Sum_probs=54.6
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC------cce--eecccchHHhhcCCCcEEEEcCCC
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG------VEI--IYKPLSEMLSCAADADVVFTSTAS 319 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~------~~~--~~~~~~~~~~~l~~aDVVI~AT~s 319 (513)
+|.|||+|.+|.++|..|...|. +|+++.|+++..+.+.+.... ... .+....|+.++++++|+||.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs 79 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPS 79 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-G
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccH
Confidence 68999999999999999999995 699999999888777764321 100 112246788889999999999998
Q ss_pred Cc
Q 010322 320 EA 321 (513)
Q Consensus 320 ~~ 321 (513)
..
T Consensus 80 ~~ 81 (157)
T PF01210_consen 80 QA 81 (157)
T ss_dssp GG
T ss_pred HH
Confidence 64
No 145
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.67 E-value=8e-05 Score=76.76 Aligned_cols=91 Identities=14% Similarity=0.237 Sum_probs=66.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc-
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA- 321 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~- 321 (513)
.+.|++|+|||.|.||+.+++.|...|++ |.+++|+..+.. +. ..+.+..++.+.+.++|+|+.+.+.+.
T Consensus 133 ~l~g~tvgIvG~G~IG~~vA~~l~afG~~-V~~~~~~~~~~~------~~--~~~~~~~~l~e~l~~aDvvv~~lPlt~~ 203 (312)
T PRK15469 133 HREDFTIGILGAGVLGSKVAQSLQTWGFP-LRCWSRSRKSWP------GV--QSFAGREELSAFLSQTRVLINLLPNTPE 203 (312)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCCCCCC------Cc--eeecccccHHHHHhcCCEEEECCCCCHH
Confidence 46799999999999999999999999994 999999754321 11 112234577888899999999988654
Q ss_pred --cCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 322 --PLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 322 --~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
.+++.+.+..+. ...++|+++
T Consensus 204 T~~li~~~~l~~mk-------~ga~lIN~a 226 (312)
T PRK15469 204 TVGIINQQLLEQLP-------DGAYLLNLA 226 (312)
T ss_pred HHHHhHHHHHhcCC-------CCcEEEECC
Confidence 356666666543 125777765
No 146
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=97.67 E-value=0.00025 Score=74.97 Aligned_cols=108 Identities=20% Similarity=0.236 Sum_probs=73.0
Q ss_pred cCCCchHHHHHHH----HHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCccee
Q 010322 221 AAGAVSVSSAAVE----LALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEII 296 (513)
Q Consensus 221 ~~~~~Sva~~Av~----la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~ 296 (513)
+.++.+|+-+++. +++. .+ ..+.|++|+|||.|.||+.+++.|...|++ |.++|+..... . +.
T Consensus 89 g~na~aVAE~v~~~lL~l~r~-~g-~~l~gktvGIIG~G~IG~~va~~l~a~G~~-V~~~Dp~~~~~-----~-~~---- 155 (381)
T PRK00257 89 GCNARGVVDYVLGSLLTLAER-EG-VDLAERTYGVVGAGHVGGRLVRVLRGLGWK-VLVCDPPRQEA-----E-GD---- 155 (381)
T ss_pred CcChHHHHHHHHHHHHHHhcc-cC-CCcCcCEEEEECCCHHHHHHHHHHHHCCCE-EEEECCccccc-----c-cC----
Confidence 4455566654442 2222 22 467899999999999999999999999995 99999853211 1 11
Q ss_pred ecccchHHhhcCCCcEEEEcCCCC-------ccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 297 YKPLSEMLSCAADADVVFTSTASE-------APLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 297 ~~~~~~~~~~l~~aDVVI~AT~s~-------~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
..+.++.+.+..+|+|+.+++.. ..+|+.+.+..+.+ ..++|..+
T Consensus 156 -~~~~~l~ell~~aDiV~lh~Plt~~g~~~T~~li~~~~l~~mk~-------gailIN~a 207 (381)
T PRK00257 156 -GDFVSLERILEECDVISLHTPLTKEGEHPTRHLLDEAFLASLRP-------GAWLINAS 207 (381)
T ss_pred -ccccCHHHHHhhCCEEEEeCcCCCCccccccccCCHHHHhcCCC-------CeEEEECC
Confidence 12345667778999999998863 35778777776532 25666654
No 147
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.66 E-value=0.00011 Score=73.40 Aligned_cols=68 Identities=19% Similarity=0.337 Sum_probs=53.9
Q ss_pred eEEEEcccHHHHHHHHHHHHcCC--CeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCC
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGC--TKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTAS 319 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~--~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s 319 (513)
+|.|||+|.||..+++.|...|. ..+.+++|+.++++.+++.+++. . ...+..+.+..+|+||.|++.
T Consensus 2 ~IgiIG~G~mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~--~--~~~~~~~~~~~aDvVilav~p 71 (258)
T PRK06476 2 KIGFIGTGAITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKV--R--IAKDNQAVVDRSDVVFLAVRP 71 (258)
T ss_pred eEEEECcCHHHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCc--e--EeCCHHHHHHhCCEEEEEeCH
Confidence 69999999999999999998874 35789999999998888876421 2 223444556789999999994
No 148
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=97.66 E-value=0.00013 Score=74.83 Aligned_cols=70 Identities=20% Similarity=0.160 Sum_probs=55.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
.+.|++|.|||.|.||+.+++.|+..|+ +|++++|.. +..+.+...|. .+ .++.++++.+|+|+.+++.+
T Consensus 13 ~LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~-~s~~~A~~~G~---~v---~sl~Eaak~ADVV~llLPd~ 82 (335)
T PRK13403 13 LLQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPG-KSFEVAKADGF---EV---MSVSEAVRTAQVVQMLLPDE 82 (335)
T ss_pred hhCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcc-hhhHHHHHcCC---EE---CCHHHHHhcCCEEEEeCCCh
Confidence 4689999999999999999999999999 498998863 34355555442 22 25677788999999999864
No 149
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=97.65 E-value=0.0003 Score=74.18 Aligned_cols=109 Identities=17% Similarity=0.169 Sum_probs=73.8
Q ss_pred ccCCCchHHHHHHHH----HHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcce
Q 010322 220 IAAGAVSVSSAAVEL----ALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEI 295 (513)
Q Consensus 220 i~~~~~Sva~~Av~l----a~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~ 295 (513)
.+.++.+|+-.++.+ ++. .+ ..+.|++|+|||.|.||+.+++.|...|++ |.++|+..... +. .
T Consensus 88 pg~na~aVAE~~~~~lL~l~r~-~g-~~L~gktvGIIG~G~IG~~vA~~l~a~G~~-V~~~dp~~~~~-------~~-~- 155 (378)
T PRK15438 88 PGCNAIAVVEYVFSSLLMLAER-DG-FSLHDRTVGIVGVGNVGRRLQARLEALGIK-TLLCDPPRADR-------GD-E- 155 (378)
T ss_pred CCcCchHHHHHHHHHHHHHhcc-CC-CCcCCCEEEEECcCHHHHHHHHHHHHCCCE-EEEECCccccc-------cc-c-
Confidence 355666777555432 222 22 467999999999999999999999999995 88998752210 11 0
Q ss_pred eecccchHHhhcCCCcEEEEcCCCC-------ccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 296 IYKPLSEMLSCAADADVVFTSTASE-------APLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 296 ~~~~~~~~~~~l~~aDVVI~AT~s~-------~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
..+.++.+.+..+|+|+.+++.. ..+++.+.+..+.+ ..++|+.+
T Consensus 156 --~~~~~L~ell~~sDiI~lh~PLt~~g~~~T~~li~~~~l~~mk~-------gailIN~a 207 (378)
T PRK15438 156 --GDFRSLDELVQEADILTFHTPLFKDGPYKTLHLADEKLIRSLKP-------GAILINAC 207 (378)
T ss_pred --cccCCHHHHHhhCCEEEEeCCCCCCcccccccccCHHHHhcCCC-------CcEEEECC
Confidence 12346677788999999988753 34677777776532 25566654
No 150
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=97.65 E-value=0.00056 Score=69.50 Aligned_cols=169 Identities=17% Similarity=0.171 Sum_probs=99.0
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCcccccccccc--CCCchHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIA--AGAVSVSSA 230 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~--~~~~Sva~~ 230 (513)
..|||+++.+.+++++++.+-+|++...... .|....+..--....+.+++.+..+.... ..+ ..++.
T Consensus 61 ~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~-~ta~~ 130 (324)
T cd08292 61 IGGSEAVGVVDAVGEGVKGLQVGQRVAVAPV---------HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMP-LSALM 130 (324)
T ss_pred CCCcceEEEEEEeCCCCCCCCCCCEEEeccC---------CCcceeEEEEchHHeEECCCCCCHHHhhhccccH-HHHHH
Confidence 4799999999999999988889998765310 12222221111122333444333222211 112 22344
Q ss_pred HHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc-h----HH
Q 010322 231 AVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS-E----ML 304 (513)
Q Consensus 231 Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~-~----~~ 304 (513)
++..+ .-..|.+|+|.|+ |.+|.++++.++..|++ ++++.++.++...+++ +|. ...+...+ + +.
T Consensus 131 ~~~~~------~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~i~ 201 (324)
T cd08292 131 LLDFL------GVKPGQWLIQNAAGGAVGKLVAMLAAARGIN-VINLVRRDAGVAELRA-LGI-GPVVSTEQPGWQDKVR 201 (324)
T ss_pred HHHhh------CCCCCCEEEEcccccHHHHHHHHHHHHCCCe-EEEEecCHHHHHHHHh-cCC-CEEEcCCCchHHHHHH
Confidence 43322 2346899999987 99999999999999995 7778888777756654 653 21121111 1 22
Q ss_pred hhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 305 SCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 305 ~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
... .++|+||+|++.+. . .+.++.+. .+|..+.++.
T Consensus 202 ~~~~~~~~d~v~d~~g~~~-~--~~~~~~l~-----~~g~~v~~g~ 239 (324)
T cd08292 202 EAAGGAPISVALDSVGGKL-A--GELLSLLG-----EGGTLVSFGS 239 (324)
T ss_pred HHhCCCCCcEEEECCCChh-H--HHHHHhhc-----CCcEEEEEec
Confidence 222 36999999998742 2 34455443 3565555543
No 151
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=97.64 E-value=0.00041 Score=70.72 Aligned_cols=181 Identities=19% Similarity=0.284 Sum_probs=98.4
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH-----------HHHHHHhHhcCcccchhhHHHHHH--------HhhCcc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV-----------KQVVKVGQGVVGFGRNISGLFKHA--------ISVGKR 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv-----------k~A~~~a~~~~~~g~~L~~lf~~a--------i~v~k~ 213 (513)
..|+|+++.+..|++++....+|+..+..+. .+.+..|.+...+|...++.|.++ +.+++.
T Consensus 58 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~ 137 (306)
T cd08258 58 VLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPEN 137 (306)
T ss_pred eeccceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCC
Confidence 5699999999999999998999998876431 111112211111111112333333 333333
Q ss_pred ccccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEE--eCCHHHHHHHHHHhC
Q 010322 214 VRTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVV--NRSEERVAAICEELN 291 (513)
Q Consensus 214 Vr~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~--nRs~~ra~~la~~~g 291 (513)
+..+......+...++.++.... .-..+.+|+|.|+|.+|.++++.++..|++ |+++ +++.++. .++..+|
T Consensus 138 ~~~~~aa~~~~~~~a~~~l~~~~-----~~~~g~~vlI~g~g~~g~~~~~la~~~G~~-v~~~~~~~~~~~~-~~~~~~g 210 (306)
T cd08258 138 LSLEAAALTEPLAVAVHAVAERS-----GIRPGDTVVVFGPGPIGLLAAQVAKLQGAT-VVVVGTEKDEVRL-DVAKELG 210 (306)
T ss_pred CCHHHHHhhchHHHHHHHHHHhc-----CCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEECCCCCHHHH-HHHHHhC
Confidence 32222211223334444432111 123688999999999999999999999986 6555 3444455 5666676
Q ss_pred Ccceeecccch----HHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 292 GVEIIYKPLSE----MLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 292 ~~~~~~~~~~~----~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
...+ .....+ +.... .+.|+++++.+.+..+ ...+..+. .+|..+.++.
T Consensus 211 ~~~~-~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~--~~~~~~l~-----~~G~~v~~g~ 265 (306)
T cd08258 211 ADAV-NGGEEDLAELVNEITDGDGADVVIECSGAVPAL--EQALELLR-----KGGRIVQVGI 265 (306)
T ss_pred Cccc-CCCcCCHHHHHHHHcCCCCCCEEEECCCChHHH--HHHHHHhh-----cCCEEEEEcc
Confidence 4211 010111 22222 3689999998754332 23333332 3565555554
No 152
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.64 E-value=0.00019 Score=73.44 Aligned_cols=68 Identities=18% Similarity=0.245 Sum_probs=51.6
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcC---CCcEEEEcCCCCcc
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAA---DADVVFTSTASEAP 322 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~---~aDVVI~AT~s~~~ 322 (513)
+|.|||.|.||..++..|...|. +|+++||++++.+.+.+ .|. . ..++..+.+. .+|+||.|++.+..
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~-~g~---~--~~~s~~~~~~~~~~advVi~~vp~~~~ 72 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGK-LGI---T--ARHSLEELVSKLEAPRTIWVMVPAGEV 72 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH-CCC---e--ecCCHHHHHHhCCCCCEEEEEecCchH
Confidence 69999999999999999999997 59999999999877643 342 1 1233334333 37999999998743
No 153
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=97.63 E-value=0.00012 Score=74.74 Aligned_cols=175 Identities=17% Similarity=0.142 Sum_probs=99.3
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCcccchhhHHHHHHHhhCcc--------c
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVGFGRNISGLFKHAISVGKR--------V 214 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~~g~~L~~lf~~ai~v~k~--------V 214 (513)
..|||+++.+..++++++.+-+|+..+.... .+-++.|......|...++.|..++.+++. +
T Consensus 57 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~ 136 (325)
T cd08264 57 IPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSI 136 (325)
T ss_pred ecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCC
Confidence 4699999999999999998999999876421 011222222111121123444444444431 1
Q ss_pred ccccccc-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC
Q 010322 215 RTETNIA-AGAVSVSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG 292 (513)
Q Consensus 215 r~et~i~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~ 292 (513)
..+.... ..+...+++++..+ .-..|.+|+|+|+ |++|.+++..++..|+. |+++.+. ++++++|.
T Consensus 137 ~~~~~~~~~~~~~~a~~~l~~~------~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~-v~~~~~~-----~~~~~~g~ 204 (325)
T cd08264 137 SDELAASLPVAALTAYHALKTA------GLGPGETVVVFGASGNTGIFAVQLAKMMGAE-VIAVSRK-----DWLKEFGA 204 (325)
T ss_pred CHHHhhhhhhhhHHHHHHHHhc------CCCCCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEeHH-----HHHHHhCC
Confidence 1111111 11223345544322 2346899999998 99999999999999985 6666542 34456663
Q ss_pred cceeeccc---chHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 293 VEIIYKPL---SEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 293 ~~~~~~~~---~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
. ..+... +.+.....++|+|++|++++ .+ .+.++.+. ++|..+.++.
T Consensus 205 ~-~~~~~~~~~~~l~~~~~~~d~vl~~~g~~-~~--~~~~~~l~-----~~g~~v~~g~ 254 (325)
T cd08264 205 D-EVVDYDEVEEKVKEITKMADVVINSLGSS-FW--DLSLSVLG-----RGGRLVTFGT 254 (325)
T ss_pred C-eeecchHHHHHHHHHhCCCCEEEECCCHH-HH--HHHHHhhc-----cCCEEEEEec
Confidence 1 112111 11222226799999999863 22 34455443 3566666654
No 154
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=97.63 E-value=0.00019 Score=73.37 Aligned_cols=181 Identities=22% Similarity=0.267 Sum_probs=102.2
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH------H----HHHHHhHhcCcccchhhHHHHHHHhhCc--------cc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV------K----QVVKVGQGVVGFGRNISGLFKHAISVGK--------RV 214 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv------k----~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~V 214 (513)
..|+|+++.+..+++++....+|+..+...+ - +....|...+..|...++.++.++.++. .+
T Consensus 59 ~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~ 138 (338)
T cd08254 59 TLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGV 138 (338)
T ss_pred eccccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCC
Confidence 5699999999999999998899998875211 0 0001111111112222344444444433 22
Q ss_pred cccccc-cCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc
Q 010322 215 RTETNI-AAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV 293 (513)
Q Consensus 215 r~et~i-~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~ 293 (513)
..+... ...+...++.++.... .-..+.+|+|.|+|.+|.+++..+...|+. |+++.+++++.+. +.++|..
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~-----~~~~~~~vli~g~g~vG~~~~~la~~~G~~-V~~~~~s~~~~~~-~~~~g~~ 211 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAG-----EVKPGETVLVIGLGGLGLNAVQIAKAMGAA-VIAVDIKEEKLEL-AKELGAD 211 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhcc-----CCCCCCEEEEECCcHHHHHHHHHHHHcCCE-EEEEcCCHHHHHH-HHHhCCC
Confidence 211111 1123344444432211 123688999999999999999999999986 8899999888744 4566632
Q ss_pred ceeecccc-hHHh---h--cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 294 EIIYKPLS-EMLS---C--AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 294 ~~~~~~~~-~~~~---~--l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
..+...+ ...+ . -.++|+||+|++.+..+ .+.+..+. ++|..+.++.
T Consensus 212 -~~~~~~~~~~~~~~~~~~~~~~D~vid~~g~~~~~--~~~~~~l~-----~~G~~v~~g~ 264 (338)
T cd08254 212 -EVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTF--EDAQKAVK-----PGGRIVVVGL 264 (338)
T ss_pred -EEEcCCCcCHHHHHHHhcCCCceEEEECCCCHHHH--HHHHHHhh-----cCCEEEEECC
Confidence 1111111 1111 1 24689999998865332 33444332 3565555543
No 155
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=97.62 E-value=0.00017 Score=68.78 Aligned_cols=105 Identities=17% Similarity=0.243 Sum_probs=71.4
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH--HhCCcceeecc-cchHHhhcCCCcEEEEcCC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICE--ELNGVEIIYKP-LSEMLSCAADADVVFTSTA 318 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~--~~g~~~~~~~~-~~~~~~~l~~aDVVI~AT~ 318 (513)
++.|++|+|||- .-+|+-++..|...|++ |++++.+.--. +.. ........... ..++.+.+..|||||+|+|
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~At-Vti~~~~~~~~--~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG 135 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGAR-VYSVDINGIQV--FTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVP 135 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCE-EEEEecCcccc--cccccccccccccccchhhHHHHHhhhCCEEEEccC
Confidence 689999999999 66799999999999985 99997542111 100 00000000001 1126677899999999999
Q ss_pred CCccCCChhhhhcCCchhhhcCCcEEEEeccCCCCCCccccc
Q 010322 319 SEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVAD 360 (513)
Q Consensus 319 s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdidp~v~~ 360 (513)
.+...++.++++. | .++||+++-+|+++.+.+
T Consensus 136 ~~~~~i~~d~ik~---------G-avVIDVGi~~dvd~~v~~ 167 (197)
T cd01079 136 SPNYKVPTELLKD---------G-AICINFASIKNFEPSVKE 167 (197)
T ss_pred CCCCccCHHHcCC---------C-cEEEEcCCCcCccHhHHh
Confidence 9987578888753 3 789999987777655543
No 156
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=97.62 E-value=0.00015 Score=74.69 Aligned_cols=79 Identities=18% Similarity=0.161 Sum_probs=60.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCC---
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTAS--- 319 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s--- 319 (513)
.+.|++|+|||.|.||+.+++.++..|.+ |..++|+.... ..+ + ...++.+.++.+|+|+.+++.
T Consensus 142 ~L~gktvGIiG~G~IG~~vA~~~~~fgm~-V~~~d~~~~~~-----~~~---~---~~~~l~ell~~sDvv~lh~Plt~~ 209 (311)
T PRK08410 142 EIKGKKWGIIGLGTIGKRVAKIAQAFGAK-VVYYSTSGKNK-----NEE---Y---ERVSLEELLKTSDIISIHAPLNEK 209 (311)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHhhcCCE-EEEECCCcccc-----ccC---c---eeecHHHHhhcCCEEEEeCCCCch
Confidence 57899999999999999999999999995 99999964211 111 1 234677778899999998765
Q ss_pred CccCCChhhhhcCC
Q 010322 320 EAPLFLKDHVQDLP 333 (513)
Q Consensus 320 ~~~vi~~~~l~~~~ 333 (513)
...+|+.+.++.+.
T Consensus 210 T~~li~~~~~~~Mk 223 (311)
T PRK08410 210 TKNLIAYKELKLLK 223 (311)
T ss_pred hhcccCHHHHHhCC
Confidence 34578888887764
No 157
>PRK06436 glycerate dehydrogenase; Provisional
Probab=97.61 E-value=0.00014 Score=74.64 Aligned_cols=88 Identities=15% Similarity=0.051 Sum_probs=65.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC--
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE-- 320 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~-- 320 (513)
.+.|++|+|||.|.||+.+++.|+..|+ +|.++||+... .+. .. .+.++.+.+..+|+|+.+.+..
T Consensus 119 ~L~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~~~-------~~~---~~-~~~~l~ell~~aDiv~~~lp~t~~ 186 (303)
T PRK06436 119 LLYNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSYVN-------DGI---SS-IYMEPEDIMKKSDFVLISLPLTDE 186 (303)
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcc-------cCc---cc-ccCCHHHHHhhCCEEEECCCCCch
Confidence 4689999999999999999999999999 59999997421 111 10 1245677788999999998764
Q ss_pred -ccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 321 -APLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 321 -~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
..+++.+.+..+. ...++|+++
T Consensus 187 T~~li~~~~l~~mk-------~ga~lIN~s 209 (303)
T PRK06436 187 TRGMINSKMLSLFR-------KGLAIINVA 209 (303)
T ss_pred hhcCcCHHHHhcCC-------CCeEEEECC
Confidence 3467777777653 226777775
No 158
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.61 E-value=0.00021 Score=73.10 Aligned_cols=70 Identities=24% Similarity=0.360 Sum_probs=50.6
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
+|.|||+|.||..+++.|...|. +|+++||++++.+.+.+ .|. . ...+.+++.+....+|+||.|++.+.
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~-~g~-~-~~~~~~e~~~~~~~~dvvi~~v~~~~ 71 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAE-EGA-T-GADSLEELVAKLPAPRVVWLMVPAGE 71 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHH-CCC-e-ecCCHHHHHhhcCCCCEEEEEecCCc
Confidence 69999999999999999999997 59999999999877754 342 1 11122233222234689998888763
No 159
>PRK07680 late competence protein ComER; Validated
Probab=97.61 E-value=0.00017 Score=72.66 Aligned_cols=69 Identities=22% Similarity=0.446 Sum_probs=53.9
Q ss_pred eEEEEcccHHHHHHHHHHHHcCC---CeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGC---TKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~---~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
+|.|||+|.||.+++..|...|. .+|++++|++++++.+++.+++ +.+ ..+..+.+..+|+||.|++..
T Consensus 2 ~I~iIG~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g--~~~--~~~~~~~~~~aDiVilav~p~ 73 (273)
T PRK07680 2 NIGFIGTGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPG--IHV--AKTIEEVISQSDLIFICVKPL 73 (273)
T ss_pred EEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCC--eEE--ECCHHHHHHhCCEEEEecCHH
Confidence 68999999999999999998884 4699999999998888776532 122 234445567899999999643
No 160
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=97.60 E-value=0.00045 Score=70.99 Aligned_cols=159 Identities=23% Similarity=0.350 Sum_probs=92.5
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhc------hH---HH-HHHHhHhcCcccchhhHHHHH-------HHhhCcccc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILA------QV---KQ-VVKVGQGVVGFGRNISGLFKH-------AISVGKRVR 215 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlg------Qv---k~-A~~~a~~~~~~g~~L~~lf~~-------ai~v~k~Vr 215 (513)
..|+|+++.+..++++++..-+|++.+.. ++ +. .-+.|...+.++....+.|+. .+.+++.+.
T Consensus 56 ~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~p~~~~ 135 (337)
T cd08261 56 ILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPADALLVPEGLS 135 (337)
T ss_pred ccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechheEECCCCCC
Confidence 46999999999999999989999998762 11 00 001110000000000122333 233343333
Q ss_pred ccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcce
Q 010322 216 TETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEI 295 (513)
Q Consensus 216 ~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~ 295 (513)
.+......+.++++.++..+ .-..|.+|+|.|+|.+|.++++.+...|++ |+++.++.++.. +.++++..
T Consensus 136 ~~~aa~~~~~~~a~~~~~~~------~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~-v~~~~~s~~~~~-~~~~~g~~-- 205 (337)
T cd08261 136 LDQAALVEPLAIGAHAVRRA------GVTAGDTVLVVGAGPIGLGVIQVAKARGAR-VIVVDIDDERLE-FARELGAD-- 205 (337)
T ss_pred HHHhhhhchHHHHHHHHHhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEECCCHHHHH-HHHHhCCC--
Confidence 22222223444444443221 124688999999999999999999999985 888888888875 44666632
Q ss_pred eecccc------hHHhhc--CCCcEEEEcCCCCc
Q 010322 296 IYKPLS------EMLSCA--ADADVVFTSTASEA 321 (513)
Q Consensus 296 ~~~~~~------~~~~~l--~~aDVVI~AT~s~~ 321 (513)
.+.+.. .+.... .++|++++|.+...
T Consensus 206 ~v~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~ 239 (337)
T cd08261 206 DTINVGDEDVAARLRELTDGEGADVVIDATGNPA 239 (337)
T ss_pred EEecCcccCHHHHHHHHhCCCCCCEEEECCCCHH
Confidence 222221 122222 35899999987643
No 161
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=97.60 E-value=0.00019 Score=72.11 Aligned_cols=68 Identities=34% Similarity=0.545 Sum_probs=57.4
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCC---CeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGC---TKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTAS 319 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~---~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s 319 (513)
.++.+||+|.||.+++..|...|. .+|+++||+.+++..++++||.. . ..+..+....+|+||.|+.-
T Consensus 2 ~~IgfIG~G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~~l~~~~g~~---~--~~~~~~~~~~advv~LavKP 72 (266)
T COG0345 2 MKIGFIGAGNMGEAILSGLLKSGALPPEEIIVTNRSEEKRAALAAEYGVV---T--TTDNQEAVEEADVVFLAVKP 72 (266)
T ss_pred ceEEEEccCHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHHHHHHHcCCc---c--cCcHHHHHhhCCEEEEEeCh
Confidence 479999999999999999999983 58999999999998899999752 1 34455667789999999865
No 162
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=97.58 E-value=0.0003 Score=71.90 Aligned_cols=180 Identities=19% Similarity=0.274 Sum_probs=100.8
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchH-----------HHHHHHhHhcCcccchhhHHHHHHHhhCc--------
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQV-----------KQVVKVGQGVVGFGRNISGLFKHAISVGK-------- 212 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQv-----------k~A~~~a~~~~~~g~~L~~lf~~ai~v~k-------- 212 (513)
...|+|+++.+..+++++..+-+|+..++..+ .+-++.|......+...++.|+.++.++.
T Consensus 55 ~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~ 134 (330)
T cd08245 55 LVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPD 134 (330)
T ss_pred cccCccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCC
Confidence 35799999999999999988889998874211 01112222211111111344444444443
Q ss_pred ccccccccc-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC
Q 010322 213 RVRTETNIA-AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN 291 (513)
Q Consensus 213 ~Vr~et~i~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g 291 (513)
.+..+.... ......++.++..+ ....+.+|+|+|+|.+|.++++.++..|+ +|+++.++.++.+.+ .+++
T Consensus 135 ~~~~~~~~~l~~~~~ta~~~l~~~------~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~-~~~g 206 (330)
T cd08245 135 GLPLAQAAPLLCAGITVYSALRDA------GPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELA-RKLG 206 (330)
T ss_pred CCCHHHhhhhhhhHHHHHHHHHhh------CCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH-HHhC
Confidence 221111111 01111223333221 23468899999999999999999999998 489999998887554 5666
Q ss_pred Ccceeecccc--hHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 292 GVEIIYKPLS--EMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 292 ~~~~~~~~~~--~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
... .+.... .......++|+||+|++++... .+.+..+. .+|..+.+.
T Consensus 207 ~~~-~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~--~~~~~~l~-----~~G~~i~~~ 256 (330)
T cd08245 207 ADE-VVDSGAELDEQAAAGGADVILVTVVSGAAA--EAALGGLR-----RGGRIVLVG 256 (330)
T ss_pred CcE-EeccCCcchHHhccCCCCEEEECCCcHHHH--HHHHHhcc-----cCCEEEEEC
Confidence 321 111111 1111124689999998765433 33444433 345555554
No 163
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.58 E-value=0.00029 Score=65.91 Aligned_cols=99 Identities=24% Similarity=0.313 Sum_probs=66.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeec------------------cc---c
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYK------------------PL---S 301 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~------------------~~---~ 301 (513)
.+...+|+|+|+|..|..++..|...|++ +++.+..+++...+... +...+.+. +. .
T Consensus 17 ~~~p~~vvv~G~G~vg~gA~~~~~~lGa~-v~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (168)
T PF01262_consen 17 GVPPAKVVVTGAGRVGQGAAEIAKGLGAE-VVVPDERPERLRQLESL-GAYFIEVDYEDHLERKDFDKADYYEHPESYES 94 (168)
T ss_dssp EE-T-EEEEESTSHHHHHHHHHHHHTT-E-EEEEESSHHHHHHHHHT-TTEESEETTTTTTTSB-CCHHHCHHHCCHHHH
T ss_pred CCCCeEEEEECCCHHHHHHHHHHhHCCCE-EEeccCCHHHHHhhhcc-cCceEEEcccccccccccchhhhhHHHHHhHH
Confidence 45678999999999999999999999995 89999998887665443 32212221 11 1
Q ss_pred hHHhhcCCCcEEEEcCC---CCc-cCCChhhhhcCCchhhhcCCcEEEEeccC
Q 010322 302 EMLSCAADADVVFTSTA---SEA-PLFLKDHVQDLPPVEAAVGGLRLFIDISV 350 (513)
Q Consensus 302 ~~~~~l~~aDVVI~AT~---s~~-~vi~~~~l~~~~~~~~~~~g~~viiDlav 350 (513)
.+.+.+..+|+||.+.- ... .+++.++++.+. +..+++|++.
T Consensus 95 ~f~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~-------~gsvIvDis~ 140 (168)
T PF01262_consen 95 NFAEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMK-------PGSVIVDISC 140 (168)
T ss_dssp HHHHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSS-------TTEEEEETTG
T ss_pred HHHHHHhhCcEEeeecccCCCCCCEEEEhHHhhccC-------CCceEEEEEe
Confidence 34556778999997542 223 378889988764 3389999975
No 164
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.58 E-value=0.0002 Score=73.51 Aligned_cols=73 Identities=23% Similarity=0.235 Sum_probs=55.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKGC-TKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G~-~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
..++|+|||+|.||..++..|...|. .+|++++|++++.+. +.+.+.. .. ...+..+.+.++|+||.||+...
T Consensus 5 ~~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~-a~~~g~~-~~--~~~~~~~~~~~aDvViiavp~~~ 78 (307)
T PRK07502 5 LFDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRAR-ARELGLG-DR--VTTSAAEAVKGADLVILCVPVGA 78 (307)
T ss_pred CCcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHH-HHhCCCC-ce--ecCCHHHHhcCCCEEEECCCHHH
Confidence 34689999999999999999999886 479999999987744 4444421 11 12344556789999999998754
No 165
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.57 E-value=0.00023 Score=70.22 Aligned_cols=71 Identities=21% Similarity=0.375 Sum_probs=55.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcC---CCeEEEEeC-CHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 246 TARMLVIGAGKMGKLVIKHLVAKG---CTKMVVVNR-SEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 246 g~~VlVIGaG~mG~~ia~~L~~~G---~~~V~v~nR-s~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
+.+|+|||+|.||..++..+...| ...|++++| ++++++.+++.++. . ...+..+.+.++|+||.||+...
T Consensus 4 ~~kI~iIG~G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~DiViiavp~~~ 78 (245)
T PRK07634 4 KHRILFIGAGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNV---S--TTTDWKQHVTSVDTIVLAMPPSA 78 (245)
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCc---E--EeCChHHHHhcCCEEEEecCHHH
Confidence 578999999999999999998876 334788888 47888888877652 2 12445566778999999999753
No 166
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=97.57 E-value=0.00034 Score=72.12 Aligned_cols=161 Identities=16% Similarity=0.166 Sum_probs=95.9
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHH----------HHHHHhHhcCcccchhhHHHHHHHhhCc----------
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVK----------QVVKVGQGVVGFGRNISGLFKHAISVGK---------- 212 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk----------~A~~~a~~~~~~g~~L~~lf~~ai~v~k---------- 212 (513)
..|+|+++.+..++++.+..-+|+......+. +..+.|......|..-++.|++++.++.
T Consensus 57 ~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~ 136 (345)
T cd08260 57 VPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPD 136 (345)
T ss_pred eeccceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCC
Confidence 57999999999999999888999988763221 1122222211111111455555555543
Q ss_pred ccccccccc-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC
Q 010322 213 RVRTETNIA-AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN 291 (513)
Q Consensus 213 ~Vr~et~i~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g 291 (513)
.+..+.... ..+..++++++.. .. ....+.+|+|.|+|.+|.++++.++..|+. |+++.++.++.+. +.++|
T Consensus 137 ~~~~~~aa~l~~~~~ta~~~l~~----~~-~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~-vi~~~~~~~~~~~-~~~~g 209 (345)
T cd08260 137 DVDFVTAAGLGCRFATAFRALVH----QA-RVKPGEWVAVHGCGGVGLSAVMIASALGAR-VIAVDIDDDKLEL-ARELG 209 (345)
T ss_pred CCCHHHhhhhccchHHHHHHHHH----cc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEeCCHHHHHH-HHHhC
Confidence 121111111 1233444544321 11 234689999999999999999999999985 8888888888744 46676
Q ss_pred Ccceeecccc---hHHh----hc-CCCcEEEEcCCCCcc
Q 010322 292 GVEIIYKPLS---EMLS----CA-ADADVVFTSTASEAP 322 (513)
Q Consensus 292 ~~~~~~~~~~---~~~~----~l-~~aDVVI~AT~s~~~ 322 (513)
.. .+.+.. +... .. ..+|++|+|++++..
T Consensus 210 ~~--~~i~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~ 246 (345)
T cd08260 210 AV--ATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPET 246 (345)
T ss_pred CC--EEEccccchhHHHHHHHHhCCCCCEEEEcCCCHHH
Confidence 42 222221 2111 11 269999999986443
No 167
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.57 E-value=0.00021 Score=72.35 Aligned_cols=71 Identities=18% Similarity=0.322 Sum_probs=55.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCC---CeEEEEeCCH-HHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 246 TARMLVIGAGKMGKLVIKHLVAKGC---TKMVVVNRSE-ERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 246 g~~VlVIGaG~mG~~ia~~L~~~G~---~~V~v~nRs~-~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
..+|.|||+|.||..+++.|...|. .+|+++||+. ++++.++..++. . ...+..+.+..+|+||.|++...
T Consensus 3 ~mkI~~IG~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~---~--~~~~~~e~~~~aDvVilav~p~~ 77 (279)
T PRK07679 3 IQNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGV---K--GTHNKKELLTDANILFLAMKPKD 77 (279)
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCc---e--EeCCHHHHHhcCCEEEEEeCHHH
Confidence 4689999999999999999998872 5799999976 466777776653 2 22344555678999999998754
No 168
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=97.56 E-value=0.00043 Score=71.39 Aligned_cols=160 Identities=13% Similarity=0.215 Sum_probs=93.8
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH---------H-HHHHHhHhcCc-ccchhhHHHHHHHhhCcc--------
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV---------K-QVVKVGQGVVG-FGRNISGLFKHAISVGKR-------- 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv---------k-~A~~~a~~~~~-~g~~L~~lf~~ai~v~k~-------- 213 (513)
..|||+++.+.++++++....+|+..+.... . .-+..|...++ .|...++.|++++.++..
T Consensus 57 ~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp 136 (345)
T cd08286 57 ILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLP 136 (345)
T ss_pred eecccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECC
Confidence 5799999999999999988889998876321 0 01111111111 111123455555544432
Q ss_pred --ccccccccC-CCchHHHHHH-HHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHH
Q 010322 214 --VRTETNIAA-GAVSVSSAAV-ELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEE 289 (513)
Q Consensus 214 --Vr~et~i~~-~~~Sva~~Av-~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~ 289 (513)
+........ .+...++.+. ..+ ....+.+|+|.|+|.+|.++++.++..|..+|++++++..+. .++.+
T Consensus 137 ~~~~~~~aa~l~~~~~ta~~~~~~~~------~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~-~~~~~ 209 (345)
T cd08286 137 EGVDEEAAVMLSDILPTGYECGVLNG------KVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRL-EVAKK 209 (345)
T ss_pred CCCCHHHhhhccchhHHHHHHHHhhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHH
Confidence 111111110 1122333321 111 234689999999999999999999999955688899988776 56677
Q ss_pred hCCcceeecccc--h----HHhhc--CCCcEEEEcCCCCc
Q 010322 290 LNGVEIIYKPLS--E----MLSCA--ADADVVFTSTASEA 321 (513)
Q Consensus 290 ~g~~~~~~~~~~--~----~~~~l--~~aDVVI~AT~s~~ 321 (513)
+|.. .+.+.. + +.... .++|+||+|++.+.
T Consensus 210 ~g~~--~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~ 247 (345)
T cd08286 210 LGAT--HTVNSAKGDAIEQVLELTDGRGVDVVIEAVGIPA 247 (345)
T ss_pred hCCC--ceeccccccHHHHHHHHhCCCCCCEEEECCCCHH
Confidence 7742 122211 1 22222 36999999997643
No 169
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.56 E-value=0.00025 Score=72.13 Aligned_cols=69 Identities=29% Similarity=0.386 Sum_probs=53.8
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCcc
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
.+|.|||+|.||..++..|...|. +|+++||++++.+.+.. .+. . ..++..+.+.++|+||.|++.+..
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~-~g~---~--~~~~~~e~~~~~d~vi~~vp~~~~ 71 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIA-AGA---E--TASTAKAVAEQCDVIITMLPNSPH 71 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHH-CCC---e--ecCCHHHHHhcCCEEEEeCCCHHH
Confidence 479999999999999999999997 59999999988866543 232 1 223455566789999999986543
No 170
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.55 E-value=0.00025 Score=73.38 Aligned_cols=75 Identities=28% Similarity=0.335 Sum_probs=56.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC------Ccc--eeecccchHHhhcCCCcEEEEcC
Q 010322 246 TARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN------GVE--IIYKPLSEMLSCAADADVVFTST 317 (513)
Q Consensus 246 g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g------~~~--~~~~~~~~~~~~l~~aDVVI~AT 317 (513)
..+|.|||+|.||..++..|...|. +|++++|++++.+.+..... +.. ..+...++..+.+..+|+||.|+
T Consensus 4 ~m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v 82 (328)
T PRK14618 4 GMRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV 82 (328)
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence 4589999999999999999999997 59999999988877765310 100 00223345666678999999999
Q ss_pred CCCc
Q 010322 318 ASEA 321 (513)
Q Consensus 318 ~s~~ 321 (513)
++..
T Consensus 83 ~~~~ 86 (328)
T PRK14618 83 PSKA 86 (328)
T ss_pred chHH
Confidence 9874
No 171
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=97.55 E-value=0.00019 Score=74.25 Aligned_cols=71 Identities=21% Similarity=0.143 Sum_probs=56.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
.+.+++|.|||+|.||.+++..|+..|. +|++.+|+..+..+.+...|. .. .+..+++..+|+||.+++..
T Consensus 14 ~L~gktIgIIG~GsmG~AlA~~L~~sG~-~Vvv~~r~~~~s~~~A~~~G~---~~---~s~~eaa~~ADVVvLaVPd~ 84 (330)
T PRK05479 14 LIKGKKVAIIGYGSQGHAHALNLRDSGV-DVVVGLREGSKSWKKAEADGF---EV---LTVAEAAKWADVIMILLPDE 84 (330)
T ss_pred hhCCCEEEEEeeHHHHHHHHHHHHHCCC-EEEEEECCchhhHHHHHHCCC---ee---CCHHHHHhcCCEEEEcCCHH
Confidence 4678999999999999999999999998 588888876666666666542 22 25566778999999999865
No 172
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.55 E-value=0.00022 Score=73.31 Aligned_cols=73 Identities=25% Similarity=0.448 Sum_probs=55.8
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHHhCCc------ceeecccchHHhhcCCCcEEEEcCCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCT-KMVVVNRSEERVAAICEELNGV------EIIYKPLSEMLSCAADADVVFTSTAS 319 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~-~V~v~nRs~~ra~~la~~~g~~------~~~~~~~~~~~~~l~~aDVVI~AT~s 319 (513)
++|.|||+|.+|..++..|...|.. +|+++|+++++++.++..+... ...+. ..+ .+.+.++|+||.|++.
T Consensus 1 ~kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~~~-~~~l~~aDIVIitag~ 78 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-AGD-YSDCKDADIVVITAGA 78 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-cCC-HHHhCCCCEEEEccCC
Confidence 3799999999999999999999974 8999999999988887765211 11111 122 2347899999999998
Q ss_pred Cc
Q 010322 320 EA 321 (513)
Q Consensus 320 ~~ 321 (513)
|.
T Consensus 79 ~~ 80 (306)
T cd05291 79 PQ 80 (306)
T ss_pred CC
Confidence 63
No 173
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.55 E-value=0.00015 Score=73.69 Aligned_cols=67 Identities=21% Similarity=0.287 Sum_probs=53.3
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
+|.|||+|.||..++..|...|. +|+++||++++.+.+.+. +. ....+..+.+.++|+||.|++.+.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~-g~-----~~~~~~~~~~~~aDivi~~vp~~~ 67 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAA-GA-----VTAETARQVTEQADVIFTMVPDSP 67 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHC-CC-----cccCCHHHHHhcCCEEEEecCCHH
Confidence 48999999999999999999997 599999999988666542 32 122345566789999999998753
No 174
>COG0281 SfcA Malic enzyme [Energy production and conversion]
Probab=97.54 E-value=0.00055 Score=71.96 Aligned_cols=248 Identities=20% Similarity=0.208 Sum_probs=135.7
Q ss_pred cCCCCHHHHhhhcC--CCCChHHHHHHHhccCCCcceEEeeecCeeEEEEEeccccccHHHHHHHHHHhcCCChhhhhhH
Q 010322 72 VHTAPVEMREKLAI--PEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEH 149 (513)
Q Consensus 72 hk~apv~~RE~~a~--~~~~~~~~l~~l~~~~~i~e~viLsTCNR~EiY~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 149 (513)
|.+-|+...|-|++ ++. .-+.++++.+.+.-.. +..+|--.+.+.++-.. +--+-+| .-..|++..+-.-.
T Consensus 36 ~~~~~~~~~~dl~l~YTPg-Va~~~~~i~~d~~~~~----~yt~~~n~vaVvTDgta-VLGLGni-Gp~ag~pVmeGKa~ 108 (432)
T COG0281 36 YPTVPLHTQEDLPLAYTPG-VAEACKAISEDPRKAY----SYTARGNLVAVVTDGTA-VLGLGNI-GPLAGKPVMEGKAV 108 (432)
T ss_pred EEcccccCHhhcCcccCCc-hHHHHHHHHhCcchhh----hcCCCCceEEEEECCce-eeccccc-ccccCcchhhhHHH
Confidence 56677777777765 332 3345555554432211 44455444444432111 0000001 11234555444444
Q ss_pred HHHhc-CCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhh-HHHHHHHhhCcccccccccc------
Q 010322 150 RFLLY-NKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNIS-GLFKHAISVGKRVRTETNIA------ 221 (513)
Q Consensus 150 ~~~~~-G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~-~lf~~ai~v~k~Vr~et~i~------ 221 (513)
+|... |.+++--...++ +++= +-+..+.. +-.+-|..|+ --|.+++.+-.+.+.+..|.
T Consensus 109 Lfk~faGid~~pI~ld~~---------~~~e---i~~~Vkal-~p~FgginLedi~ap~cf~ie~~lr~~~~IPvFhDDq 175 (432)
T COG0281 109 LFKAFAGIDVLPIELDVG---------TNNE---IIEFVKAL-EPTFGGINLEDIDAPRCFAIEERLRYRMNIPVFHDDQ 175 (432)
T ss_pred HHHHhcCCCceeeEeeCC---------ChHH---HHHHHHHh-hhcCCCcceeecccchhhHHHHHHhhcCCCCcccccc
Confidence 44332 344333333333 2222 22222222 1222333443 34556666666666666654
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCC--eEEEEeCC----HHHH--------HHHH
Q 010322 222 AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCT--KMVVVNRS----EERV--------AAIC 287 (513)
Q Consensus 222 ~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~--~V~v~nRs----~~ra--------~~la 287 (513)
+++..|..+++--+-+..+ ..+...+|++.|+|..|.+++..|.+.|++ +|+++||. .++- ..++
T Consensus 176 qGTaiv~lA~llnalk~~g-k~l~d~kiv~~GAGAAgiaia~~l~~~g~~~~~i~~~D~~G~l~~~r~~~~~~~~k~~~a 254 (432)
T COG0281 176 QGTAIVTLAALLNALKLTG-KKLKDQKIVINGAGAAGIAIADLLVAAGVKEENIFVVDRKGLLYDGREDLTMNQKKYAKA 254 (432)
T ss_pred cHHHHHHHHHHHHHHHHhC-CCccceEEEEeCCcHHHHHHHHHHHHhCCCcccEEEEecCCcccCCCcccccchHHHHHH
Confidence 3555555555543444333 578899999999999999999999999997 89999985 1111 1112
Q ss_pred H-HhCCcceeecccchHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC-CCCcc
Q 010322 288 E-ELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR-NVGSC 357 (513)
Q Consensus 288 ~-~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr-didp~ 357 (513)
. ..+ .+.. ...+.++||.|-+++. .+|++++++.+.+ ..+++-||.|- .+.|+
T Consensus 255 ~~~~~-------~~~~-~~~~~~adv~iG~S~~--G~~t~e~V~~Ma~-------~PiIfalaNP~pEi~Pe 309 (432)
T COG0281 255 IEDTG-------ERTL-DLALAGADVLIGVSGV--GAFTEEMVKEMAK-------HPIIFALANPTPEITPE 309 (432)
T ss_pred Hhhhc-------cccc-cccccCCCEEEEcCCC--CCcCHHHHHHhcc-------CCEEeecCCCCccCCHH
Confidence 1 111 1111 2367899999999888 6788999988752 37888888884 44443
No 175
>PRK06932 glycerate dehydrogenase; Provisional
Probab=97.53 E-value=0.00019 Score=74.06 Aligned_cols=87 Identities=15% Similarity=0.174 Sum_probs=64.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC--
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE-- 320 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~-- 320 (513)
.+.|++|+|||.|.||+.+++.|+..|++ |..++|+... ... ..+.++.+.+..+|+|+.+++..
T Consensus 144 ~l~gktvgIiG~G~IG~~va~~l~~fg~~-V~~~~~~~~~------~~~------~~~~~l~ell~~sDiv~l~~Plt~~ 210 (314)
T PRK06932 144 DVRGSTLGVFGKGCLGTEVGRLAQALGMK-VLYAEHKGAS------VCR------EGYTPFEEVLKQADIVTLHCPLTET 210 (314)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHhcCCCE-EEEECCCccc------ccc------cccCCHHHHHHhCCEEEEcCCCChH
Confidence 46899999999999999999999999995 8888876321 111 12345777788999999987654
Q ss_pred -ccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 321 -APLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 321 -~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
..+|+.+.+..+.+ ..++|..+
T Consensus 211 T~~li~~~~l~~mk~-------ga~lIN~a 233 (314)
T PRK06932 211 TQNLINAETLALMKP-------TAFLINTG 233 (314)
T ss_pred HhcccCHHHHHhCCC-------CeEEEECC
Confidence 46788888877642 26677665
No 176
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=97.53 E-value=0.00016 Score=68.57 Aligned_cols=73 Identities=21% Similarity=0.358 Sum_probs=47.0
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC----------Ccc--------eeecccchHHhhcCC
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN----------GVE--------IIYKPLSEMLSCAAD 309 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g----------~~~--------~~~~~~~~~~~~l~~ 309 (513)
+|.|||+|.||..++..+...|. +|++++++++.++...+.+. ... ..+....++.++. +
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~-~ 78 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAV-D 78 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGC-T
T ss_pred CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHh-h
Confidence 68999999999999999999998 59999999886533222211 000 0111234555555 9
Q ss_pred CcEEEEcCCCCcc
Q 010322 310 ADVVFTSTASEAP 322 (513)
Q Consensus 310 aDVVI~AT~s~~~ 322 (513)
+|+||+|++-...
T Consensus 79 adlViEai~E~l~ 91 (180)
T PF02737_consen 79 ADLVIEAIPEDLE 91 (180)
T ss_dssp ESEEEE-S-SSHH
T ss_pred hheehhhccccHH
Confidence 9999999876543
No 177
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.53 E-value=0.00024 Score=73.54 Aligned_cols=75 Identities=20% Similarity=0.287 Sum_probs=52.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh----------CCc----ceeecccchHHhhcCCCc
Q 010322 246 TARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL----------NGV----EIIYKPLSEMLSCAADAD 311 (513)
Q Consensus 246 g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~----------g~~----~~~~~~~~~~~~~l~~aD 311 (513)
-++|.|||+|.||..++..+...|.. |+++|++++..+.....+ +.. ...+....++.+.+.+||
T Consensus 7 i~~VaVIGaG~MG~giA~~~a~aG~~-V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD 85 (321)
T PRK07066 7 IKTFAAIGSGVIGSGWVARALAHGLD-VVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD 85 (321)
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCe-EEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence 36899999999999999999999985 999999987654332211 100 001112245666778999
Q ss_pred EEEEcCCCCc
Q 010322 312 VVFTSTASEA 321 (513)
Q Consensus 312 VVI~AT~s~~ 321 (513)
+||+|.+-..
T Consensus 86 lViEavpE~l 95 (321)
T PRK07066 86 FIQESAPERE 95 (321)
T ss_pred EEEECCcCCH
Confidence 9999977543
No 178
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=97.52 E-value=0.00045 Score=71.29 Aligned_cols=161 Identities=16% Similarity=0.276 Sum_probs=94.0
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHH----------HHHHHhHhcCcccchhhHHHHHHHhhCc--------cc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVK----------QVVKVGQGVVGFGRNISGLFKHAISVGK--------RV 214 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk----------~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~V 214 (513)
..|+|+++.+..++.+++...+|+..+.-..+ +-.+.|...++.|....+.|++++.++. .+
T Consensus 60 ~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~ 139 (341)
T cd05281 60 IFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDI 139 (341)
T ss_pred ccccceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCC
Confidence 47999999999999998888889988653110 0011222222222112233443333332 22
Q ss_pred cccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcc
Q 010322 215 RTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVE 294 (513)
Q Consensus 215 r~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~ 294 (513)
..+......+.++++.++. + ...+|.+|+|.|+|.+|.++++.++..|+.+|++++++.++. .+++++|..
T Consensus 140 ~~~~a~~~~~~~~a~~~~~-~------~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~-~~~~~~g~~- 210 (341)
T cd05281 140 PPEIASIQEPLGNAVHTVL-A------GDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRL-ELAKKMGAD- 210 (341)
T ss_pred CHHHhhhhhHHHHHHHHHH-h------cCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHhCcc-
Confidence 2221111223333333322 1 124689999999999999999999999986688887887776 677777642
Q ss_pred eeeccc-chH---Hhhc--CCCcEEEEcCCCCcc
Q 010322 295 IIYKPL-SEM---LSCA--ADADVVFTSTASEAP 322 (513)
Q Consensus 295 ~~~~~~-~~~---~~~l--~~aDVVI~AT~s~~~ 322 (513)
..+... .+. .+.. .++|+||+|++++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~vd~vld~~g~~~~ 244 (341)
T cd05281 211 VVINPREEDVVEVKSVTDGTGVDVVLEMSGNPKA 244 (341)
T ss_pred eeeCcccccHHHHHHHcCCCCCCEEEECCCCHHH
Confidence 111111 122 2222 369999999987543
No 179
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.52 E-value=0.00019 Score=72.92 Aligned_cols=75 Identities=20% Similarity=0.351 Sum_probs=55.2
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC----------Ccc--------eeecccchHHhhcC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN----------GVE--------IIYKPLSEMLSCAA 308 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g----------~~~--------~~~~~~~~~~~~l~ 308 (513)
++|.|||+|.||..++..|...|.. |+++|+++++.+.+.+... ... ..+....+..+.+.
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGFQ-TTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA 80 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCCc-EEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence 5799999999999999999999985 9999999988766543210 000 00112345666788
Q ss_pred CCcEEEEcCCCCcc
Q 010322 309 DADVVFTSTASEAP 322 (513)
Q Consensus 309 ~aDVVI~AT~s~~~ 322 (513)
++|+||+|++....
T Consensus 81 ~aD~Vi~avpe~~~ 94 (288)
T PRK09260 81 DADLVIEAVPEKLE 94 (288)
T ss_pred CCCEEEEeccCCHH
Confidence 99999999998753
No 180
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.52 E-value=0.00041 Score=70.29 Aligned_cols=91 Identities=20% Similarity=0.337 Sum_probs=68.2
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcccHH-HHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhh
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGAGKM-GKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSC 306 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGaG~m-G~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~ 306 (513)
+.+.+++.+. ++ -++.|++|+|||.|.+ |+.++..|...|++ |+++.... .++.+.
T Consensus 142 p~aii~lL~~-~~-i~l~Gk~vvViGrs~iVGkPla~lL~~~~at-Vt~~hs~t--------------------~~l~~~ 198 (285)
T PRK14189 142 PYGVMKMLES-IG-IPLRGAHAVVIGRSNIVGKPMAMLLLQAGAT-VTICHSKT--------------------RDLAAH 198 (285)
T ss_pred HHHHHHHHHH-cC-CCCCCCEEEEECCCCccHHHHHHHHHHCCCE-EEEecCCC--------------------CCHHHH
Confidence 4455566554 32 4789999999999888 99999999999985 88865421 234556
Q ss_pred cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 307 AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
++.||+||+|+|.+.. ++.++++. | .++||+++.+
T Consensus 199 ~~~ADIVV~avG~~~~-i~~~~ik~---------g-avVIDVGin~ 233 (285)
T PRK14189 199 TRQADIVVAAVGKRNV-LTADMVKP---------G-ATVIDVGMNR 233 (285)
T ss_pred hhhCCEEEEcCCCcCc-cCHHHcCC---------C-CEEEEccccc
Confidence 7899999999998864 67777643 3 6899998654
No 181
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.52 E-value=0.00018 Score=76.04 Aligned_cols=72 Identities=24% Similarity=0.411 Sum_probs=52.0
Q ss_pred EEEEcccHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHHhCCccee-----ecccchHHhhcCCCcEEEEcCCCC
Q 010322 249 MLVIGAGKMGKLVIKHLVAKGCT-KMVVVNRSEERVAAICEELNGVEII-----YKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 249 VlVIGaG~mG~~ia~~L~~~G~~-~V~v~nRs~~ra~~la~~~g~~~~~-----~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
|+|+|+|.+|+.+++.|...+.. +|++.+|+.++++.+++.+....+. +...+++.+.+.++|+||+|++..
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence 78999999999999999988654 8999999999998888763221122 122234667789999999999764
No 182
>KOG3007 consensus Mu-crystallin [Amino acid transport and metabolism]
Probab=97.52 E-value=0.00043 Score=68.53 Aligned_cols=86 Identities=13% Similarity=0.260 Sum_probs=69.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhC----CcceeecccchHHhhcCCCcEEEEcCCC
Q 010322 246 TARMLVIGAGKMGKLVIKHLVAK-G-CTKMVVVNRSEERVAAICEELN----GVEIIYKPLSEMLSCAADADVVFTSTAS 319 (513)
Q Consensus 246 g~~VlVIGaG~mG~~ia~~L~~~-G-~~~V~v~nRs~~ra~~la~~~g----~~~~~~~~~~~~~~~l~~aDVVI~AT~s 319 (513)
.....++|+|..+-.......+. . .++|.++||+.++++++|+.+. ...+.+.+++.+.+++..+|||+.||.+
T Consensus 138 S~vL~i~GsG~qA~~hi~ih~~~~pslreVrIwnht~e~A~~la~~lsk~~~~iqie~~~~qsl~~aV~~sDIIs~atls 217 (333)
T KOG3007|consen 138 SCVLTIFGSGLQAFWHIYIHIKLIPSLREVRIWNHTNEMALDLAKSLSKLFSNIQIELNQYQSLNGAVSNSDIISGATLS 217 (333)
T ss_pred ceEEEEEcccchhHHHHHHHHHhcccceEEEeecCChHHHHHHHHHhhhcccceEEEEEehhhhhcccccCceEEecccc
Confidence 34567789999999888755543 3 6899999999999999998653 2245667778888999999999999999
Q ss_pred CccCCChhhhhc
Q 010322 320 EAPLFLKDHVQD 331 (513)
Q Consensus 320 ~~~vi~~~~l~~ 331 (513)
..|++-.+++.+
T Consensus 218 tePilfgewlkp 229 (333)
T KOG3007|consen 218 TEPILFGEWLKP 229 (333)
T ss_pred CCceeeeeeecC
Confidence 999887777754
No 183
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=97.51 E-value=0.0002 Score=66.39 Aligned_cols=70 Identities=20% Similarity=0.143 Sum_probs=51.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
+.+++|.|||.|..|.+.+..|+..|+ +|+|..|...+..+.|++-|. .+. +..++++.+|+|+..+|..
T Consensus 2 l~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf---~v~---~~~eAv~~aDvV~~L~PD~ 71 (165)
T PF07991_consen 2 LKGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGF---EVM---SVAEAVKKADVVMLLLPDE 71 (165)
T ss_dssp HCTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT----ECC---EHHHHHHC-SEEEE-S-HH
T ss_pred cCCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCC---eec---cHHHHHhhCCEEEEeCChH
Confidence 368999999999999999999999999 599999987756677777653 332 4556677999999999875
No 184
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=97.51 E-value=0.00026 Score=76.92 Aligned_cols=74 Identities=22% Similarity=0.311 Sum_probs=55.7
Q ss_pred EEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC-Ccce-eecccchHHhhcCCCcEEEEcCCCCccC
Q 010322 249 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN-GVEI-IYKPLSEMLSCAADADVVFTSTASEAPL 323 (513)
Q Consensus 249 VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g-~~~~-~~~~~~~~~~~l~~aDVVI~AT~s~~~v 323 (513)
|.|||.|.||..++..|...|. +|+++||++++.+.+.+... +..+ ......++.+.+..+|+||.|++.+.++
T Consensus 2 IG~IGLG~MG~~mA~nL~~~G~-~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~~~v 77 (467)
T TIGR00873 2 IGVIGLAVMGSNLALNMADHGF-TVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAGAPV 77 (467)
T ss_pred EEEEeeHHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCcHHH
Confidence 7899999999999999999998 59999999999988887532 1001 1122334444456789999999887654
No 185
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=97.51 E-value=0.00027 Score=73.18 Aligned_cols=91 Identities=16% Similarity=0.272 Sum_probs=68.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCC---
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTAS--- 319 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s--- 319 (513)
++.|+++.|||.|.||+++++.++..|.+ |..++|++. .+..+.++ ..+.+ +.+.++.+|+|+...|.
T Consensus 143 ~l~gktvGIiG~GrIG~avA~r~~~Fgm~-v~y~~~~~~--~~~~~~~~---~~y~~---l~ell~~sDii~l~~Plt~~ 213 (324)
T COG1052 143 DLRGKTLGIIGLGRIGQAVARRLKGFGMK-VLYYDRSPN--PEAEKELG---ARYVD---LDELLAESDIISLHCPLTPE 213 (324)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHhcCCCE-EEEECCCCC--hHHHhhcC---ceecc---HHHHHHhCCEEEEeCCCChH
Confidence 67899999999999999999999988985 999999864 22233332 23333 66677899999988665
Q ss_pred CccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 320 EAPLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 320 ~~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
+..+|+.+.++.+. ...++|..+
T Consensus 214 T~hLin~~~l~~mk-------~ga~lVNta 236 (324)
T COG1052 214 TRHLINAEELAKMK-------PGAILVNTA 236 (324)
T ss_pred HhhhcCHHHHHhCC-------CCeEEEECC
Confidence 45688888887763 236777765
No 186
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=97.50 E-value=0.00052 Score=71.52 Aligned_cols=168 Identities=14% Similarity=0.118 Sum_probs=97.3
Q ss_pred cCC--ceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccch--hhHHHHHH--HhhCcccccc-cc-ccCCCc
Q 010322 154 YNK--DATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRN--ISGLFKHA--ISVGKRVRTE-TN-IAAGAV 225 (513)
Q Consensus 154 ~G~--eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~--L~~lf~~a--i~v~k~Vr~e-t~-i~~~~~ 225 (513)
.|+ ++++.+..|+++++...+|+....- +.+..+ .+.-.... +.++..+..+ .. ....+.
T Consensus 76 ~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~------------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~ 143 (348)
T PLN03154 76 PGQRIEGFGVSKVVDSDDPNFKPGDLISGI------------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAG 143 (348)
T ss_pred CCCeeEeeEEEEEEecCCCCCCCCCEEEec------------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHH
Confidence 576 7788999999999989999987521 111111 00000000 1112222221 11 111233
Q ss_pred hHHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc--ch
Q 010322 226 SVSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL--SE 302 (513)
Q Consensus 226 Sva~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~--~~ 302 (513)
.+++.++... . ...+|++|+|.|+ |++|.++++.++..|++ |+++.++.++.+.+..++|.. ..+... ++
T Consensus 144 ~TA~~al~~~---~--~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~-Vi~~~~~~~k~~~~~~~lGa~-~vi~~~~~~~ 216 (348)
T PLN03154 144 FTAYAGFYEV---C--SPKKGDSVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFD-EAFNYKEEPD 216 (348)
T ss_pred HHHHHHHHHh---c--CCCCCCEEEEecCccHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHhcCCC-EEEECCCccc
Confidence 3444443211 1 2347899999999 99999999999999995 888888888875444467752 222211 12
Q ss_pred HHhhc-----CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 303 MLSCA-----ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 303 ~~~~l-----~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
..+.+ .++|+||+|++.. .+ ...+..+. ++|+.++++.
T Consensus 217 ~~~~i~~~~~~gvD~v~d~vG~~-~~--~~~~~~l~-----~~G~iv~~G~ 259 (348)
T PLN03154 217 LDAALKRYFPEGIDIYFDNVGGD-ML--DAALLNMK-----IHGRIAVCGM 259 (348)
T ss_pred HHHHHHHHCCCCcEEEEECCCHH-HH--HHHHHHhc-----cCCEEEEECc
Confidence 22211 3689999999864 22 34455443 4677777764
No 187
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=97.50 E-value=0.00021 Score=77.56 Aligned_cols=76 Identities=16% Similarity=0.213 Sum_probs=54.6
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhc---CCCcEEEEcCCCCccC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCA---ADADVVFTSTASEAPL 323 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l---~~aDVVI~AT~s~~~v 323 (513)
.+|.|||.|.||..++..|...|. +|+++||++++.+.+.+........+....++.+.+ ..+|+||.+.+.+.++
T Consensus 2 ~~IgvIGLG~MG~~lA~nL~~~G~-~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v 80 (470)
T PTZ00142 2 SDIGLIGLAVMGQNLALNIASRGF-KISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAV 80 (470)
T ss_pred CEEEEEeEhHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHH
Confidence 369999999999999999999998 599999999998888764211001122334444444 3589888887776554
No 188
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.49 E-value=0.0003 Score=68.68 Aligned_cols=99 Identities=22% Similarity=0.312 Sum_probs=65.6
Q ss_pred CeEEEEc-ccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh----CC--cceeecccchHHhhcCCCcEEEEcCCC
Q 010322 247 ARMLVIG-AGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL----NG--VEIIYKPLSEMLSCAADADVVFTSTAS 319 (513)
Q Consensus 247 ~~VlVIG-aG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~----g~--~~~~~~~~~~~~~~l~~aDVVI~AT~s 319 (513)
++|.||| +|.||..++..|...|. +|++++|++++++.++..+ +. ....+. ..+..+.+..+|+||.|++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~-~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~ea~~~aDvVilavp~ 78 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN-KIIIGSRDLEKAEEAAAKALEELGHGGSDIKVT-GADNAEAAKRADVVILAVPW 78 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-EEEEEEcCHHHHHHHHHHHHhhccccCCCceEE-EeChHHHHhcCCEEEEECCH
Confidence 3699997 89999999999999985 6999999999987776643 11 000111 12334567789999999998
Q ss_pred CccCCChhhhhcCCchhhhcCCcEEEEeccCCCCC
Q 010322 320 EAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNV 354 (513)
Q Consensus 320 ~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPrdi 354 (513)
... .+.++.+.+. ..+ .++||+..|-+.
T Consensus 79 ~~~---~~~l~~l~~~---l~~-~vvI~~~ngi~~ 106 (219)
T TIGR01915 79 DHV---LKTLESLRDE---LSG-KLVISPVVPLAS 106 (219)
T ss_pred HHH---HHHHHHHHHh---ccC-CEEEEeccCcee
Confidence 643 2222221110 123 689999766443
No 189
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=97.49 E-value=0.0011 Score=67.56 Aligned_cols=168 Identities=18% Similarity=0.215 Sum_probs=95.7
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccCCCchHHHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAAGAVSVSSAAV 232 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~~~~Sva~~Av 232 (513)
..|+|+++.+..++++++.+.+|+..+... .|..+.+..---...++++... .+......+...+++++
T Consensus 63 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~----------~g~~~s~~~v~~~~~~~ip~~~-~~~a~l~~~~~ta~~~l 131 (329)
T cd08250 63 DCGFEGVGEVVAVGEGVTDFKVGDAVATMS----------FGAFAEYQVVPARHAVPVPELK-PEVLPLLVSGLTASIAL 131 (329)
T ss_pred ccCceeEEEEEEECCCCCCCCCCCEEEEec----------CcceeEEEEechHHeEECCCCc-chhhhcccHHHHHHHHH
Confidence 579999999999999998888999887531 1222221111001122223211 11111112333444443
Q ss_pred HHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc-hHHhh----
Q 010322 233 ELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS-EMLSC---- 306 (513)
Q Consensus 233 ~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~-~~~~~---- 306 (513)
... . ...+|.+|+|+|+ |.+|.++++.+...|+. |+++.++.++...+ ..+|.. ..+...+ +....
T Consensus 132 ~~~----~-~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~-v~~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~ 203 (329)
T cd08250 132 EEV----G-EMKSGETVLVTAAAGGTGQFAVQLAKLAGCH-VIGTCSSDEKAEFL-KSLGCD-RPINYKTEDLGEVLKKE 203 (329)
T ss_pred HHh----c-CCCCCCEEEEEeCccHHHHHHHHHHHHcCCe-EEEEeCcHHHHHHH-HHcCCc-eEEeCCCccHHHHHHHh
Confidence 221 1 2346899999995 99999999999999985 88888888877444 667631 1111111 11111
Q ss_pred -cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 307 -AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 307 -l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
-.+.|+||+|++.. .+ ...+..+. .+|..+.++
T Consensus 204 ~~~~vd~v~~~~g~~-~~--~~~~~~l~-----~~g~~v~~g 237 (329)
T cd08250 204 YPKGVDVVYESVGGE-MF--DTCVDNLA-----LKGRLIVIG 237 (329)
T ss_pred cCCCCeEEEECCcHH-HH--HHHHHHhc-----cCCeEEEEe
Confidence 14689999998862 22 33444432 245555554
No 190
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=97.48 E-value=0.00029 Score=72.96 Aligned_cols=83 Identities=18% Similarity=0.193 Sum_probs=62.6
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC--
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE-- 320 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~-- 320 (513)
.+.|++|.|||+|.||+.+++.|...|.+ |..+|+...+. .+...+ +...+++.+.+..+|+|+..++..
T Consensus 139 el~gkTvGIiG~G~IG~~va~~l~afgm~-v~~~d~~~~~~--~~~~~~-----~~~~~~Ld~lL~~sDiv~lh~PlT~e 210 (324)
T COG0111 139 ELAGKTVGIIGLGRIGRAVAKRLKAFGMK-VIGYDPYSPRE--RAGVDG-----VVGVDSLDELLAEADILTLHLPLTPE 210 (324)
T ss_pred cccCCEEEEECCCHHHHHHHHHHHhCCCe-EEEECCCCchh--hhcccc-----ceecccHHHHHhhCCEEEEcCCCCcc
Confidence 46799999999999999999999999995 99999933322 111111 223466788889999999987664
Q ss_pred -ccCCChhhhhcCC
Q 010322 321 -APLFLKDHVQDLP 333 (513)
Q Consensus 321 -~~vi~~~~l~~~~ 333 (513)
..+++.+.+..+.
T Consensus 211 T~g~i~~~~~a~MK 224 (324)
T COG0111 211 TRGLINAEELAKMK 224 (324)
T ss_pred hhcccCHHHHhhCC
Confidence 4578888887653
No 191
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.47 E-value=0.00029 Score=73.42 Aligned_cols=78 Identities=24% Similarity=0.373 Sum_probs=56.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH---------------------HHHHHHHHHhC----Ccceeec
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE---------------------ERVAAICEELN----GVEIIYK 298 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~---------------------~ra~~la~~~g----~~~~~~~ 298 (513)
+.+++|+|||+|++|..++.+|...|+.+|+++|++. .|++.+++.+. ...+...
T Consensus 22 L~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~ 101 (338)
T PRK12475 22 IREKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPV 101 (338)
T ss_pred hcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEE
Confidence 5789999999999999999999999999999999863 24444444332 2112211
Q ss_pred c----cchHHhhcCCCcEEEEcCCCCc
Q 010322 299 P----LSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 299 ~----~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
. .+++.+.+.++|+||+||....
T Consensus 102 ~~~~~~~~~~~~~~~~DlVid~~D~~~ 128 (338)
T PRK12475 102 VTDVTVEELEELVKEVDLIIDATDNFD 128 (338)
T ss_pred eccCCHHHHHHHhcCCCEEEEcCCCHH
Confidence 1 1345667889999999997754
No 192
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.47 E-value=0.00055 Score=69.36 Aligned_cols=91 Identities=19% Similarity=0.337 Sum_probs=67.6
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcccH-HHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhh
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGAGK-MGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSC 306 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGaG~-mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~ 306 (513)
+.+.+++.+. ++ .++.|++|+|||.|. +|+.++..|...|++ |+++++.. .++.+.
T Consensus 143 p~av~~ll~~-~~-i~l~Gk~vvViGrs~iVG~Pla~lL~~~~at-Vtv~hs~T--------------------~~l~~~ 199 (285)
T PRK10792 143 PRGIMTLLER-YG-IDTYGLNAVVVGASNIVGRPMSLELLLAGCT-VTVCHRFT--------------------KNLRHH 199 (285)
T ss_pred HHHHHHHHHH-cC-CCCCCCEEEEECCCcccHHHHHHHHHHCCCe-EEEEECCC--------------------CCHHHH
Confidence 3344455543 32 468999999999988 999999999999985 99987641 134455
Q ss_pred cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 307 AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
+..||+||+|+|.|.. ++.++++. | .++||+++-+
T Consensus 200 ~~~ADIvi~avG~p~~-v~~~~vk~---------g-avVIDvGin~ 234 (285)
T PRK10792 200 VRNADLLVVAVGKPGF-IPGEWIKP---------G-AIVIDVGINR 234 (285)
T ss_pred HhhCCEEEEcCCCccc-ccHHHcCC---------C-cEEEEccccc
Confidence 6789999999999986 46666632 2 7899998543
No 193
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=97.44 E-value=0.0003 Score=72.36 Aligned_cols=180 Identities=17% Similarity=0.246 Sum_probs=103.1
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchH---------H-HHHHHhHhcCc---ccchhhHHHHHHHhhCcc-----
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQV---------K-QVVKVGQGVVG---FGRNISGLFKHAISVGKR----- 213 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQv---------k-~A~~~a~~~~~---~g~~L~~lf~~ai~v~k~----- 213 (513)
...|+|+++.+.+|++++....+|+..+.... . +-+..|...-. .|...++.|++++.++..
T Consensus 56 ~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~ 135 (347)
T cd05278 56 MILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLA 135 (347)
T ss_pred ceeccceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEE
Confidence 35799999999999999988889998886311 1 11111211000 011234556655555432
Q ss_pred -ccc----ccccc-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Q 010322 214 -VRT----ETNIA-AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIC 287 (513)
Q Consensus 214 -Vr~----et~i~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la 287 (513)
++. +.... ..+..+++.++..+ ...++.+|+|.|+|.+|.++++.++..|+..|++++++.++. .++
T Consensus 136 ~lP~~~~~~~aa~l~~~~~ta~~~~~~~------~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~-~~~ 208 (347)
T cd05278 136 KIPDGLPDEDALMLSDILPTGFHGAELA------GIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERL-DLA 208 (347)
T ss_pred ECCCCCCHHHHhhhcchhhheeehhhhc------CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHH-HHH
Confidence 111 11111 11233344443221 123689999999999999999999999975688888887776 566
Q ss_pred HHhCCcceeecccc--hH----Hhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 288 EELNGVEIIYKPLS--EM----LSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 288 ~~~g~~~~~~~~~~--~~----~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
++++.. .+.... +. .... .++|++++|++....+ ...++.+. ++|..+.++
T Consensus 209 ~~~g~~--~vi~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~--~~~~~~l~-----~~G~~v~~g 267 (347)
T cd05278 209 KEAGAT--DIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETF--EQAVKVVR-----PGGTIANVG 267 (347)
T ss_pred HHhCCc--EEEcCCcchHHHHHHHHcCCCCCcEEEEccCCHHHH--HHHHHHhh-----cCCEEEEEc
Confidence 677632 222211 12 2222 3689999998864322 33344332 356555554
No 194
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=97.43 E-value=0.00032 Score=71.83 Aligned_cols=177 Identities=18% Similarity=0.279 Sum_probs=103.3
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH----------HHHHHHhHhcCcccchhhHHHHHHHhhCc--------cc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV----------KQVVKVGQGVVGFGRNISGLFKHAISVGK--------RV 214 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv----------k~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~V 214 (513)
..|+|+++.+..+++++....+|+..+.... ..-++.|......|...++.|..++.++. .+
T Consensus 57 ~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~ 136 (334)
T PRK13771 57 ILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNV 136 (334)
T ss_pred eccccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCC
Confidence 4699999999999999887888998875321 01112222222222223455555555543 22
Q ss_pred ccccccc-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC
Q 010322 215 RTETNIA-AGAVSVSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG 292 (513)
Q Consensus 215 r~et~i~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~ 292 (513)
..+.... .-+..++++++... ....+.+|+|.|+ |.+|.++++.++..|++ |+++.+++++.+.+ +.+ .
T Consensus 137 ~~~~~a~l~~~~~~a~~~~~~~------~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~-vi~~~~~~~~~~~~-~~~-~ 207 (334)
T PRK13771 137 SDEGAVIVPCVTGMVYRGLRRA------GVKKGETVLVTGAGGGVGIHAIQVAKALGAK-VIAVTSSESKAKIV-SKY-A 207 (334)
T ss_pred CHHHhhcccchHHHHHHHHHhc------CCCCCCEEEEECCCccHHHHHHHHHHHcCCE-EEEEeCCHHHHHHH-HHH-H
Confidence 2111111 12344455554432 1246889999999 99999999999999985 88888888877443 444 2
Q ss_pred cceeecc--c-chHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 293 VEIIYKP--L-SEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 293 ~~~~~~~--~-~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
.. .+.. + +++.. +.++|++++|++... + .+.++.+. ++|..+.++.
T Consensus 208 ~~-~~~~~~~~~~v~~-~~~~d~~ld~~g~~~-~--~~~~~~l~-----~~G~~v~~g~ 256 (334)
T PRK13771 208 DY-VIVGSKFSEEVKK-IGGADIVIETVGTPT-L--EESLRSLN-----MGGKIIQIGN 256 (334)
T ss_pred HH-hcCchhHHHHHHh-cCCCcEEEEcCChHH-H--HHHHHHHh-----cCCEEEEEec
Confidence 11 1111 1 12222 246899999998742 2 34454443 3565555553
No 195
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=97.42 E-value=0.00076 Score=69.27 Aligned_cols=145 Identities=16% Similarity=0.173 Sum_probs=87.5
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhC--------cccccccccc-CC
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVG--------KRVRTETNIA-AG 223 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~--------k~Vr~et~i~-~~ 223 (513)
..|||+++.+.+++++++..-+|+..+.... . ++.|.+++.++ +.+..+.... ..
T Consensus 66 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--------~--------~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~ 129 (341)
T cd08290 66 VGGNEGVGEVVKVGSGVKSLKPGDWVIPLRP--------G--------LGTWRTHAVVPADDLIKVPNDVDPEQAATLSV 129 (341)
T ss_pred CCCcceEEEEEEeCCCCCCCCCCCEEEecCC--------C--------CccchheEeccHHHeEeCCCCCCHHHHHHhhc
Confidence 5799999999999999998999998875321 0 23334433333 2222221111 12
Q ss_pred CchHHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCH----HHHHHHHHHhCCcceeec
Q 010322 224 AVSVSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSE----ERVAAICEELNGVEIIYK 298 (513)
Q Consensus 224 ~~Sva~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~----~ra~~la~~~g~~~~~~~ 298 (513)
+...++.++.... ....|.+|+|.|+ |.+|.++++.++..|++ ++++.++. ++. +++.++|... .+.
T Consensus 130 ~~~ta~~~l~~~~-----~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~-~~~~~~g~~~-~~~ 201 (341)
T cd08290 130 NPCTAYRLLEDFV-----KLQPGDWVIQNGANSAVGQAVIQLAKLLGIK-TINVVRDRPDLEELK-ERLKALGADH-VLT 201 (341)
T ss_pred cHHHHHHHHHhhc-----ccCCCCEEEEccchhHHHHHHHHHHHHcCCe-EEEEEcCCCcchhHH-HHHHhcCCCE-EEe
Confidence 3334455442211 1246899999997 99999999999999986 55555554 444 4456676421 121
Q ss_pred ccc----hHH----hhcC-CCcEEEEcCCCCc
Q 010322 299 PLS----EML----SCAA-DADVVFTSTASEA 321 (513)
Q Consensus 299 ~~~----~~~----~~l~-~aDVVI~AT~s~~ 321 (513)
..+ +.. .... ++|+||+|++...
T Consensus 202 ~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 233 (341)
T cd08290 202 EEELRSLLATELLKSAPGGRPKLALNCVGGKS 233 (341)
T ss_pred CcccccccHHHHHHHHcCCCceEEEECcCcHh
Confidence 111 111 1122 5899999999753
No 196
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=97.42 E-value=0.00031 Score=72.46 Aligned_cols=93 Identities=15% Similarity=0.247 Sum_probs=69.7
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC-
Q 010322 242 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE- 320 (513)
Q Consensus 242 ~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~- 320 (513)
.++.|++|+|+|.|.||..+++.|...| ..|.-.+|+..+.+. +.+++. . ..+..+.+..+|+||.|.+..
T Consensus 158 ~~~~gK~vgilG~G~IG~~ia~rL~~Fg-~~i~y~~r~~~~~~~-~~~~~~---~---~~d~~~~~~~sD~ivv~~pLt~ 229 (336)
T KOG0069|consen 158 YDLEGKTVGILGLGRIGKAIAKRLKPFG-CVILYHSRTQLPPEE-AYEYYA---E---FVDIEELLANSDVIVVNCPLTK 229 (336)
T ss_pred ccccCCEEEEecCcHHHHHHHHhhhhcc-ceeeeecccCCchhh-HHHhcc---c---ccCHHHHHhhCCEEEEecCCCH
Confidence 5678999999999999999999999999 568889998776633 334432 1 346677788999999987665
Q ss_pred --ccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 321 --APLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 321 --~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
..+++++.+..+. ...++|.++
T Consensus 230 ~T~~liNk~~~~~mk-------~g~vlVN~a 253 (336)
T KOG0069|consen 230 ETRHLINKKFIEKMK-------DGAVLVNTA 253 (336)
T ss_pred HHHHHhhHHHHHhcC-------CCeEEEecc
Confidence 4577887777653 235666654
No 197
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=97.42 E-value=0.0012 Score=66.68 Aligned_cols=116 Identities=18% Similarity=0.233 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHc----CC------CeEEEEeCC----H------HHHHH
Q 010322 226 SVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAK----GC------TKMVVVNRS----E------ERVAA 285 (513)
Q Consensus 226 Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~----G~------~~V~v~nRs----~------~ra~~ 285 (513)
+|..+++--+-+..+ ..+.+.+|+|+|+|..|..+++.|... |. ++|+++|+. . +....
T Consensus 6 ~V~lAgllnAlk~~g-~~l~d~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~ 84 (279)
T cd05312 6 AVALAGLLAALRITG-KPLSDQRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKP 84 (279)
T ss_pred HHHHHHHHHHHHHhC-CChhhcEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHH
Confidence 444444433333333 567899999999999999999988876 88 689999984 1 11223
Q ss_pred HHHHhCCcceeecccchHHhhcC--CCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 286 ICEELNGVEIIYKPLSEMLSCAA--DADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 286 la~~~g~~~~~~~~~~~~~~~l~--~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
+++... . ....++.++++ ++|++|-+++.+ .+|+++.++.+.+ ...+.+++-||.|-
T Consensus 85 ~a~~~~----~-~~~~~L~e~i~~v~ptvlIG~S~~~-g~ft~evv~~Ma~----~~~~PIIFaLSNPt 143 (279)
T cd05312 85 FARKDE----E-KEGKSLLEVVKAVKPTVLIGLSGVG-GAFTEEVVRAMAK----SNERPIIFALSNPT 143 (279)
T ss_pred HHhhcC----c-ccCCCHHHHHHhcCCCEEEEeCCCC-CCCCHHHHHHHHh----cCCCCEEEECCCcC
Confidence 443311 0 12346778888 899999998765 4789999887643 12457888888884
No 198
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=97.42 E-value=0.00047 Score=69.73 Aligned_cols=74 Identities=24% Similarity=0.318 Sum_probs=56.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAK--GCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~--G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
....+|.|||+|.||+.+++.|... +++-+.+++|++++++++++.++.. ..+.++.+.+..+|+|+.||+...
T Consensus 4 m~~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~----~~~~~~eell~~~D~Vvi~tp~~~ 79 (271)
T PRK13302 4 RPELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRP----PPVVPLDQLATHADIVVEAAPASV 79 (271)
T ss_pred CCeeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCC----cccCCHHHHhcCCCEEEECCCcHH
Confidence 3457899999999999999999863 6654458999999998888887631 123445555678999999998754
No 199
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.42 E-value=0.00036 Score=70.93 Aligned_cols=73 Identities=18% Similarity=0.285 Sum_probs=52.8
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC----------Ccc---------eeecccchHHhhc
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN----------GVE---------IIYKPLSEMLSCA 307 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g----------~~~---------~~~~~~~~~~~~l 307 (513)
++|.|||+|.||..++..|...|. +|+++++++++.+...+.+. ... ..+....+..+++
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~ 82 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGF-DVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAV 82 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHh
Confidence 579999999999999999999997 59999999876544332210 000 0111234566678
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
.++|+||.|++..
T Consensus 83 ~~aDlVieavpe~ 95 (287)
T PRK08293 83 KDADLVIEAVPED 95 (287)
T ss_pred cCCCEEEEeccCC
Confidence 8999999999875
No 200
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.41 E-value=0.00043 Score=69.31 Aligned_cols=69 Identities=29% Similarity=0.418 Sum_probs=54.0
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCC--CeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGC--TKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~--~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
.+|.|||+|.||..++..|...|. ..|++++|++++++.+.+.++. .+ ..+..+.+..+|+||.|++..
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~---~~--~~~~~~~~~~advVil~v~~~ 73 (267)
T PRK11880 3 KKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGV---RA--ATDNQEAAQEADVVVLAVKPQ 73 (267)
T ss_pred CEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCC---ee--cCChHHHHhcCCEEEEEcCHH
Confidence 579999999999999999998872 4699999999988777776542 22 234444567899999999764
No 201
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=97.40 E-value=0.0012 Score=61.40 Aligned_cols=92 Identities=20% Similarity=0.325 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEccc-HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHh
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGAG-KMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLS 305 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGaG-~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~ 305 (513)
.+...+++.+. .+ .++.|++|+|||.+ .+|+.++..|...|+. |+++...- .++.+
T Consensus 19 Tp~aii~lL~~-~~-~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~at-Vt~~h~~T--------------------~~l~~ 75 (160)
T PF02882_consen 19 TPLAIIELLEY-YG-IDLEGKKVVVVGRSNIVGKPLAMLLLNKGAT-VTICHSKT--------------------KNLQE 75 (160)
T ss_dssp HHHHHHHHHHH-TT--STTT-EEEEE-TTTTTHHHHHHHHHHTT-E-EEEE-TTS--------------------SSHHH
T ss_pred CHHHHHHHHHh-cC-CCCCCCEEEEECCcCCCChHHHHHHHhCCCe-EEeccCCC--------------------Ccccc
Confidence 34444566554 32 47899999999996 5999999999999985 88877642 22344
Q ss_pred hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 306 CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
.+..||+||+|+|.+.. ++.++++. + .++||+++..
T Consensus 76 ~~~~ADIVVsa~G~~~~-i~~~~ik~---------g-avVIDvG~~~ 111 (160)
T PF02882_consen 76 ITRRADIVVSAVGKPNL-IKADWIKP---------G-AVVIDVGINY 111 (160)
T ss_dssp HHTTSSEEEE-SSSTT--B-GGGS-T---------T-EEEEE--CEE
T ss_pred eeeeccEEeeeeccccc-cccccccC---------C-cEEEecCCcc
Confidence 56789999999999876 56677642 2 7999998543
No 202
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.40 E-value=0.00011 Score=65.74 Aligned_cols=72 Identities=24% Similarity=0.360 Sum_probs=49.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
...+|.|||+|.+|..+++.|...|..-+-+++|+.+.++.++..++.. . ..++.+.+..+|++|-|++...
T Consensus 9 ~~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~--~---~~~~~~~~~~aDlv~iavpDda 80 (127)
T PF10727_consen 9 ARLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAG--A---ILDLEEILRDADLVFIAVPDDA 80 (127)
T ss_dssp ---EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT----------TTGGGCC-SEEEE-S-CCH
T ss_pred CccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccc--c---ccccccccccCCEEEEEechHH
Confidence 3568999999999999999999999875567799988887777666542 2 2344556789999999999873
No 203
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=97.40 E-value=0.00029 Score=71.63 Aligned_cols=65 Identities=22% Similarity=0.247 Sum_probs=51.9
Q ss_pred EEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCcc
Q 010322 251 VIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 251 VIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
|||+|.||..+++.|...|. +|+++||++++.+.+.+. |. . ..++..+.+.++|+||.|++.+..
T Consensus 1 ~IGlG~mG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~-g~---~--~~~s~~~~~~~advVil~vp~~~~ 65 (288)
T TIGR01692 1 FIGLGNMGGPMAANLLKAGH-PVRVFDLFPDAVEEAVAA-GA---Q--AAASPAEAAEGADRVITMLPAGQH 65 (288)
T ss_pred CCcccHhHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHc-CC---e--ecCCHHHHHhcCCEEEEeCCChHH
Confidence 58999999999999999997 599999999988776542 32 1 234556677899999999998654
No 204
>PRK06487 glycerate dehydrogenase; Provisional
Probab=97.40 E-value=0.00036 Score=72.16 Aligned_cols=86 Identities=14% Similarity=0.124 Sum_probs=63.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC--
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE-- 320 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~-- 320 (513)
.+.|++|+|||.|.||+.+++.|...|.+ |..++|... . . . . ...++.+.+..+|+|+.+++..
T Consensus 145 ~l~gktvgIiG~G~IG~~vA~~l~~fgm~-V~~~~~~~~-~-~-----~---~---~~~~l~ell~~sDiv~l~lPlt~~ 210 (317)
T PRK06487 145 ELEGKTLGLLGHGELGGAVARLAEAFGMR-VLIGQLPGR-P-A-----R---P---DRLPLDELLPQVDALTLHCPLTEH 210 (317)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHhhCCCE-EEEECCCCC-c-c-----c---c---cccCHHHHHHhCCEEEECCCCChH
Confidence 47899999999999999999999999995 888998631 1 0 0 0 1235667788999999997754
Q ss_pred -ccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 321 -APLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 321 -~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
..+|+.+.+..+.+ ..++|..+
T Consensus 211 T~~li~~~~~~~mk~-------ga~lIN~a 233 (317)
T PRK06487 211 TRHLIGARELALMKP-------GALLINTA 233 (317)
T ss_pred HhcCcCHHHHhcCCC-------CeEEEECC
Confidence 56788888877642 25666554
No 205
>PRK08605 D-lactate dehydrogenase; Validated
Probab=97.39 E-value=0.00045 Score=71.83 Aligned_cols=90 Identities=19% Similarity=0.242 Sum_probs=63.2
Q ss_pred CCCCCeEEEEcccHHHHHHHHHH-HHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 243 SHATARMLVIGAGKMGKLVIKHL-VAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L-~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
.+.|++|+|||+|.||+.+++.| ...|+ +|+.+|++.... .. .. +. ...++.+.+.++|+|+.|++...
T Consensus 143 ~l~g~~VgIIG~G~IG~~vA~~L~~~~g~-~V~~~d~~~~~~--~~-~~----~~--~~~~l~ell~~aDvIvl~lP~t~ 212 (332)
T PRK08605 143 SIKDLKVAVIGTGRIGLAVAKIFAKGYGS-DVVAYDPFPNAK--AA-TY----VD--YKDTIEEAVEGADIVTLHMPATK 212 (332)
T ss_pred eeCCCEEEEECCCHHHHHHHHHHHhcCCC-EEEEECCCccHh--HH-hh----cc--ccCCHHHHHHhCCEEEEeCCCCc
Confidence 46899999999999999999999 55787 599999986543 11 11 11 12356677889999999988753
Q ss_pred ---cCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 322 ---PLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 322 ---~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
.+++.+.++.+. ...++|+++
T Consensus 213 ~t~~li~~~~l~~mk-------~gailIN~s 236 (332)
T PRK08605 213 YNHYLFNADLFKHFK-------KGAVFVNCA 236 (332)
T ss_pred chhhhcCHHHHhcCC-------CCcEEEECC
Confidence 345544454442 226888876
No 206
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=97.38 E-value=0.0009 Score=68.20 Aligned_cols=93 Identities=23% Similarity=0.263 Sum_probs=62.7
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc-chHHh----hc-CCCcEEEEc
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL-SEMLS----CA-ADADVVFTS 316 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~-~~~~~----~l-~~aDVVI~A 316 (513)
.+|.+|+|.|+ |++|.++++.++..|++ |+++.++.++. ++++++|... .+... ++..+ .. .++|+|+++
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~-vi~~~~s~~~~-~~l~~~Ga~~-vi~~~~~~~~~~v~~~~~~gvd~vld~ 218 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIKGCK-VIGCAGSDDKV-AWLKELGFDA-VFNYKTVSLEEALKEAAPDGIDCYFDN 218 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCE-EEEEeCCHHHH-HHHHHcCCCE-EEeCCCccHHHHHHHHCCCCcEEEEEC
Confidence 46899999995 99999999999999995 88889998887 5556677421 22211 12211 11 468999999
Q ss_pred CCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 317 TASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 317 T~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
++.. .+ ...++.+. .+|..+.++
T Consensus 219 ~g~~-~~--~~~~~~l~-----~~G~iv~~g 241 (329)
T cd08294 219 VGGE-FS--STVLSHMN-----DFGRVAVCG 241 (329)
T ss_pred CCHH-HH--HHHHHhhc-----cCCEEEEEc
Confidence 9873 22 34444443 356666665
No 207
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.38 E-value=0.00056 Score=69.30 Aligned_cols=91 Identities=20% Similarity=0.319 Sum_probs=66.6
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhh
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSC 306 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~ 306 (513)
+.+.+++.+. ++ .++.|++|+|||. |-||+.++..|...|+. |+++.... .++.+.
T Consensus 142 p~avi~lL~~-~~-i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gat-Vtv~~s~t--------------------~~l~~~ 198 (284)
T PRK14179 142 PAGIMEMFRE-YN-VELEGKHAVVIGRSNIVGKPMAQLLLDKNAT-VTLTHSRT--------------------RNLAEV 198 (284)
T ss_pred HHHHHHHHHH-hC-CCCCCCEEEEECCCCcCcHHHHHHHHHCCCE-EEEECCCC--------------------CCHHHH
Confidence 3344566543 32 4789999999999 99999999999999985 88883210 134455
Q ss_pred cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 307 AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
++.||+||+|+|.+.. ++.++++. | .++||+++-+
T Consensus 199 ~~~ADIVI~avg~~~~-v~~~~ik~---------G-avVIDvgin~ 233 (284)
T PRK14179 199 ARKADILVVAIGRGHF-VTKEFVKE---------G-AVVIDVGMNR 233 (284)
T ss_pred HhhCCEEEEecCcccc-CCHHHccC---------C-cEEEEeccee
Confidence 6789999999999977 45555432 3 7899998644
No 208
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.38 E-value=0.00083 Score=68.08 Aligned_cols=89 Identities=16% Similarity=0.299 Sum_probs=66.6
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcccH-HHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhh
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGAGK-MGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSC 306 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGaG~-mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~ 306 (513)
+.+.+++.+. ++ -++.|++|+|||.|. +|+.++..|...|++ |++++... .++.+.
T Consensus 148 p~av~~ll~~-~~-i~l~Gk~vvViGrs~iVGkPla~lL~~~~at-Vtv~hs~T--------------------~~l~~~ 204 (287)
T PRK14176 148 PHGVIRALEE-YG-VDIEGKNAVIVGHSNVVGKPMAAMLLNRNAT-VSVCHVFT--------------------DDLKKY 204 (287)
T ss_pred HHHHHHHHHH-cC-CCCCCCEEEEECCCcccHHHHHHHHHHCCCE-EEEEeccC--------------------CCHHHH
Confidence 3344455543 32 468999999999988 999999999999985 88888421 133445
Q ss_pred cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccC
Q 010322 307 AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISV 350 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlav 350 (513)
+..||+||+|+|.|..+ +.++++. | .++||+++
T Consensus 205 ~~~ADIvv~AvG~p~~i-~~~~vk~---------g-avVIDvGi 237 (287)
T PRK14176 205 TLDADILVVATGVKHLI-KADMVKE---------G-AVIFDVGI 237 (287)
T ss_pred HhhCCEEEEccCCcccc-CHHHcCC---------C-cEEEEecc
Confidence 67899999999999764 7777642 2 78999986
No 209
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.37 E-value=0.00043 Score=74.70 Aligned_cols=68 Identities=26% Similarity=0.452 Sum_probs=54.7
Q ss_pred CeEEEEc-ccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 247 ARMLVIG-AGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 247 ~~VlVIG-aG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
++|+||| +|.||..++..|...|. +|++++|+++++.+++.++|. . ...+..+.+.++|+||.|++..
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~-~V~v~~r~~~~~~~~a~~~gv---~--~~~~~~e~~~~aDvVIlavp~~ 69 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF-EVIVTGRDPKKGKEVAKELGV---E--YANDNIDAAKDADIVIISVPIN 69 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHcCC---e--eccCHHHHhccCCEEEEecCHH
Confidence 3699998 79999999999999997 599999999887777777653 2 1234556678899999999874
No 210
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=97.37 E-value=0.0012 Score=67.74 Aligned_cols=163 Identities=15% Similarity=0.156 Sum_probs=95.5
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchh--hHHHHHHHhh----Cccccccccc--cCC
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNI--SGLFKHAISV----GKRVRTETNI--AAG 223 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L--~~lf~~ai~v----~k~Vr~et~i--~~~ 223 (513)
...|.|+++.+.+++. .+.+|++...-. . ...+. +. ..+..+ +..+..+... ...
T Consensus 59 ~i~G~~~~g~v~~~~~---~~~~GdrV~~~~---~---------~~~~~~~~~--~~~~~l~~~~p~~~~~~~aaa~l~~ 121 (325)
T TIGR02825 59 TMMGQQVARVVESKNV---ALPKGTIVLASP---G---------WTSHSISDG--KDLEKLLTEWPDTLPLSLALGTVGM 121 (325)
T ss_pred cEecceEEEEEEeCCC---CCCCCCEEEEec---C---------ceeeEEech--hheEEccccccCCCCHHHHHHhccc
Confidence 3579999999998764 567888876410 0 11110 00 001111 3333322221 123
Q ss_pred CchHHHHHH-HHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc-
Q 010322 224 AVSVSSAAV-ELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL- 300 (513)
Q Consensus 224 ~~Sva~~Av-~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~- 300 (513)
+..+++.++ +.+ ...+|.+|+|.|+ |++|.++++.++..|++ |+++.++.++. +++.++|.. ..+...
T Consensus 122 ~~~TA~~~l~~~~------~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~-Vi~~~~s~~~~-~~~~~lGa~-~vi~~~~ 192 (325)
T TIGR02825 122 PGLTAYFGLLEIC------GVKGGETVMVNAAAGAVGSVVGQIAKLKGCK-VVGAAGSDEKV-AYLKKLGFD-VAFNYKT 192 (325)
T ss_pred HHHHHHHHHHHHh------CCCCCCEEEEeCCccHHHHHHHHHHHHcCCE-EEEEeCCHHHH-HHHHHcCCC-EEEeccc
Confidence 344555553 222 2347899999995 99999999999999994 88889998887 555778752 122111
Q ss_pred -chHHhh---c--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 301 -SEMLSC---A--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 301 -~~~~~~---l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
++..+. . .++|+||+|++.+. + ...++.+. ++|+.+.++.
T Consensus 193 ~~~~~~~~~~~~~~gvdvv~d~~G~~~-~--~~~~~~l~-----~~G~iv~~G~ 238 (325)
T TIGR02825 193 VKSLEETLKKASPDGYDCYFDNVGGEF-S--NTVIGQMK-----KFGRIAICGA 238 (325)
T ss_pred cccHHHHHHHhCCCCeEEEEECCCHHH-H--HHHHHHhC-----cCcEEEEecc
Confidence 122211 1 36899999998743 2 34555443 4676776654
No 211
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.37 E-value=0.00041 Score=65.47 Aligned_cols=75 Identities=21% Similarity=0.270 Sum_probs=52.7
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH------------------HHHHHHHHHhC----Ccceeec----ccc
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE------------------ERVAAICEELN----GVEIIYK----PLS 301 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~------------------~ra~~la~~~g----~~~~~~~----~~~ 301 (513)
+|+|+|+|++|..++++|...|+.+++++|.+. .|++.+++.+. ...+... ..+
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~~ 80 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDEN 80 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecChh
Confidence 589999999999999999999999999998864 24444444332 1111111 112
Q ss_pred hHHhhcCCCcEEEEcCCCCcc
Q 010322 302 EMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 302 ~~~~~l~~aDVVI~AT~s~~~ 322 (513)
+..+.+.++|+||+|+.+...
T Consensus 81 ~~~~~l~~~DlVi~~~d~~~~ 101 (174)
T cd01487 81 NLEGLFGDCDIVVEAFDNAET 101 (174)
T ss_pred hHHHHhcCCCEEEECCCCHHH
Confidence 345668899999999877643
No 212
>PLN02306 hydroxypyruvate reductase
Probab=97.37 E-value=0.00062 Score=72.17 Aligned_cols=99 Identities=16% Similarity=0.207 Sum_probs=68.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHH-HcCCCeEEEEeCCHHH-HHHHHHHhCC-------cceeecccchHHhhcCCCcEE
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLV-AKGCTKMVVVNRSEER-VAAICEELNG-------VEIIYKPLSEMLSCAADADVV 313 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~-~~G~~~V~v~nRs~~r-a~~la~~~g~-------~~~~~~~~~~~~~~l~~aDVV 313 (513)
.+.|++|+|||.|.||+.+++.|. ..|+ +|..++|+... ...+...++. ....+....++.+.+..+|+|
T Consensus 162 ~L~gktvGIiG~G~IG~~vA~~l~~~fGm-~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDiV 240 (386)
T PLN02306 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADVI 240 (386)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhcCCC-EEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCEE
Confidence 478999999999999999999985 8898 49999987532 1111122221 000111124678888999999
Q ss_pred EEcCCC---CccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 314 FTSTAS---EAPLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 314 I~AT~s---~~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
+.+++. ...+|+.+.++.+. ...++|.++
T Consensus 241 ~lh~Plt~~T~~lin~~~l~~MK-------~ga~lIN~a 272 (386)
T PLN02306 241 SLHPVLDKTTYHLINKERLALMK-------KEAVLVNAS 272 (386)
T ss_pred EEeCCCChhhhhhcCHHHHHhCC-------CCeEEEECC
Confidence 998654 45688888888764 237888876
No 213
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.37 E-value=0.00035 Score=64.84 Aligned_cols=73 Identities=22% Similarity=0.257 Sum_probs=51.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
++.|++|+|||+|.+|..-++.|...|+. |+|++.. ..+++.+ ++. +.+..-.-..+.+.++|+||.||..+.
T Consensus 10 ~l~~~~vlVvGGG~va~rka~~Ll~~ga~-V~VIsp~--~~~~l~~-l~~--i~~~~~~~~~~dl~~a~lViaaT~d~e 82 (157)
T PRK06719 10 NLHNKVVVIIGGGKIAYRKASGLKDTGAF-VTVVSPE--ICKEMKE-LPY--ITWKQKTFSNDDIKDAHLIYAATNQHA 82 (157)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCc--cCHHHHh-ccC--cEEEecccChhcCCCceEEEECCCCHH
Confidence 57899999999999999999999999985 8888654 3334433 332 122111111234789999999998875
No 214
>PLN02688 pyrroline-5-carboxylate reductase
Probab=97.36 E-value=0.00041 Score=69.44 Aligned_cols=65 Identities=23% Similarity=0.340 Sum_probs=50.4
Q ss_pred eEEEEcccHHHHHHHHHHHHcCC---CeEEEE-eCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCC
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGC---TKMVVV-NRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTA 318 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~---~~V~v~-nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~ 318 (513)
+|.|||+|.||..+++.|...|. .+|+++ ||++++.+.+. ++|. .+ ..+..+.+.++|+||.|++
T Consensus 2 kI~~IG~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~-~~g~---~~--~~~~~e~~~~aDvVil~v~ 70 (266)
T PLN02688 2 RVGFIGAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQ-SLGV---KT--AASNTEVVKSSDVIILAVK 70 (266)
T ss_pred eEEEECCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHH-HcCC---EE--eCChHHHHhcCCEEEEEEC
Confidence 69999999999999999999885 258888 99999886654 3442 22 2344455678999999995
No 215
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.35 E-value=0.00053 Score=66.84 Aligned_cols=78 Identities=23% Similarity=0.264 Sum_probs=55.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH------------------HHHHHHHHHhC----Ccceeec---
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE------------------ERVAAICEELN----GVEIIYK--- 298 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~------------------~ra~~la~~~g----~~~~~~~--- 298 (513)
+...+|+|+|+|++|..++.+|...|+.+++++|.+. .|++.+++.+. ...+...
T Consensus 26 L~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~ 105 (212)
T PRK08644 26 LKKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEK 105 (212)
T ss_pred HhCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeee
Confidence 4678999999999999999999999999999999861 24544444432 1111111
Q ss_pred -ccchHHhhcCCCcEEEEcCCCCc
Q 010322 299 -PLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 299 -~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
..++..+.+.++|+||+|+-...
T Consensus 106 i~~~~~~~~~~~~DvVI~a~D~~~ 129 (212)
T PRK08644 106 IDEDNIEELFKDCDIVVEAFDNAE 129 (212)
T ss_pred cCHHHHHHHHcCCCEEEECCCCHH
Confidence 11234456789999999987654
No 216
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.35 E-value=0.0006 Score=72.09 Aligned_cols=78 Identities=24% Similarity=0.338 Sum_probs=57.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCC-------------------HHHHHHHHHHhC----Ccceeecc-
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRS-------------------EERVAAICEELN----GVEIIYKP- 299 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs-------------------~~ra~~la~~~g----~~~~~~~~- 299 (513)
+.+++|+|+|+|++|..++..|...|+.+|+++|++ ..|++.+++.+. ...+...+
T Consensus 133 l~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 212 (376)
T PRK08762 133 LLEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE 212 (376)
T ss_pred HhcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence 467899999999999999999999999999999997 346666666552 21111111
Q ss_pred ---cchHHhhcCCCcEEEEcCCCCc
Q 010322 300 ---LSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 300 ---~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
.++..+.+.++|+||+||.+..
T Consensus 213 ~~~~~~~~~~~~~~D~Vv~~~d~~~ 237 (376)
T PRK08762 213 RVTSDNVEALLQDVDVVVDGADNFP 237 (376)
T ss_pred cCChHHHHHHHhCCCEEEECCCCHH
Confidence 1233455789999999998864
No 217
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.34 E-value=0.00065 Score=69.70 Aligned_cols=74 Identities=19% Similarity=0.261 Sum_probs=54.3
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHH----hCCc---c------eeecccchHHhhcCCCcEE
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEE----LNGV---E------IIYKPLSEMLSCAADADVV 313 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~----~g~~---~------~~~~~~~~~~~~l~~aDVV 313 (513)
++|.|||+|.||..++..|...|. +|++++++.++.+.+.+. ++.. . ..+....+..+.+.++|+|
T Consensus 5 ~~I~vIGaG~mG~~iA~~l~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlV 83 (311)
T PRK06130 5 QNLAIIGAGTMGSGIAALFARKGL-QVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLV 83 (311)
T ss_pred cEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEE
Confidence 679999999999999999999997 599999999887665542 2210 0 0011224455567899999
Q ss_pred EEcCCCCc
Q 010322 314 FTSTASEA 321 (513)
Q Consensus 314 I~AT~s~~ 321 (513)
|.|++...
T Consensus 84 i~av~~~~ 91 (311)
T PRK06130 84 IEAVPEKL 91 (311)
T ss_pred EEeccCcH
Confidence 99998764
No 218
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.34 E-value=0.00055 Score=70.30 Aligned_cols=73 Identities=23% Similarity=0.397 Sum_probs=54.2
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcc----e----eecccchHHhhcCCCcEEEEcCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVE----I----IYKPLSEMLSCAADADVVFTSTA 318 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~----~----~~~~~~~~~~~l~~aDVVI~AT~ 318 (513)
++|+|||+|.||..++..|...|. +|++++|++++.+.+........ . ......+..+.+.++|+||.|++
T Consensus 2 mkI~iiG~G~mG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (325)
T PRK00094 2 MKIAVLGAGSWGTALAIVLARNGH-DVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVP 80 (325)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCC
Confidence 479999999999999999999987 49999999988877765410000 0 01122345556779999999999
Q ss_pred CC
Q 010322 319 SE 320 (513)
Q Consensus 319 s~ 320 (513)
+.
T Consensus 81 ~~ 82 (325)
T PRK00094 81 SQ 82 (325)
T ss_pred HH
Confidence 84
No 219
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=97.33 E-value=0.00057 Score=70.82 Aligned_cols=82 Identities=13% Similarity=0.220 Sum_probs=60.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHH-HcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC-
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLV-AKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE- 320 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~-~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~- 320 (513)
.+.|++|+|||.|.||+.+++.|. ..|.+ |..++|..... ....++ ... .++.+.++.+|+|+.+++..
T Consensus 142 ~L~gktvGIiG~G~IG~~va~~l~~~fgm~-V~~~~~~~~~~--~~~~~~---~~~---~~l~ell~~sDvv~lh~plt~ 212 (323)
T PRK15409 142 DVHHKTLGIVGMGRIGMALAQRAHFGFNMP-ILYNARRHHKE--AEERFN---ARY---CDLDTLLQESDFVCIILPLTD 212 (323)
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHhcCCCE-EEEECCCCchh--hHHhcC---cEe---cCHHHHHHhCCEEEEeCCCCh
Confidence 578999999999999999999998 88985 88888864221 122333 122 35667788999999987764
Q ss_pred --ccCCChhhhhcCC
Q 010322 321 --APLFLKDHVQDLP 333 (513)
Q Consensus 321 --~~vi~~~~l~~~~ 333 (513)
..+|+.+.+..+.
T Consensus 213 ~T~~li~~~~l~~mk 227 (323)
T PRK15409 213 ETHHLFGAEQFAKMK 227 (323)
T ss_pred HHhhccCHHHHhcCC
Confidence 3577887777653
No 220
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.33 E-value=0.0011 Score=67.22 Aligned_cols=91 Identities=16% Similarity=0.260 Sum_probs=66.7
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEccc-HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHh
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGAG-KMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLS 305 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGaG-~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~ 305 (513)
++.+.+++.+. ++ .++.|++|+|||.| -+|+.++..|...|+. |+++.... .++.+
T Consensus 140 Tp~avi~lL~~-~~-i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAt-Vtv~hs~t--------------------~~l~~ 196 (285)
T PRK14191 140 TPMGVMRLLKH-YH-IEIKGKDVVIIGASNIVGKPLAMLMLNAGAS-VSVCHILT--------------------KDLSF 196 (285)
T ss_pred cHHHHHHHHHH-hC-CCCCCCEEEEECCCchhHHHHHHHHHHCCCE-EEEEeCCc--------------------HHHHH
Confidence 33444566543 22 46899999999998 9999999999999986 88875321 12334
Q ss_pred hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCC
Q 010322 306 CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVP 351 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavP 351 (513)
.+..||+||+|+|.|.. ++.++++. | .++||+++-
T Consensus 197 ~~~~ADIvV~AvG~p~~-i~~~~vk~---------G-avVIDvGi~ 231 (285)
T PRK14191 197 YTQNADIVCVGVGKPDL-IKASMVKK---------G-AVVVDIGIN 231 (285)
T ss_pred HHHhCCEEEEecCCCCc-CCHHHcCC---------C-cEEEEeecc
Confidence 56789999999999876 57777642 2 789999863
No 221
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=97.32 E-value=0.00064 Score=74.49 Aligned_cols=74 Identities=20% Similarity=0.192 Sum_probs=53.9
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh-------C---Cc----ceeecccchHHhhcCCCcE
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL-------N---GV----EIIYKPLSEMLSCAADADV 312 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~-------g---~~----~~~~~~~~~~~~~l~~aDV 312 (513)
++|.|||+|.||..++..|...|. +|+++|+++++.+.+.+.+ + .. ...+...+++.+++.++|+
T Consensus 5 ~kIavIG~G~MG~~iA~~la~~G~-~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~ 83 (495)
T PRK07531 5 MKAACIGGGVIGGGWAARFLLAGI-DVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW 83 (495)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence 589999999999999999999998 5999999998876543211 0 00 0011223456667788999
Q ss_pred EEEcCCCCc
Q 010322 313 VFTSTASEA 321 (513)
Q Consensus 313 VI~AT~s~~ 321 (513)
||+|++...
T Consensus 84 Vieavpe~~ 92 (495)
T PRK07531 84 IQESVPERL 92 (495)
T ss_pred EEEcCcCCH
Confidence 999988764
No 222
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=97.32 E-value=0.00077 Score=74.40 Aligned_cols=82 Identities=21% Similarity=0.231 Sum_probs=61.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC--
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE-- 320 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~-- 320 (513)
.+.|++|+|||.|.||+.+++.|...|+ +|..++|+... +.+..++. .. .+++.+.+..+|+|+.+++..
T Consensus 135 ~l~gktvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~--~~~~~~g~---~~--~~~l~ell~~aDvV~l~lPlt~~ 206 (525)
T TIGR01327 135 ELYGKTLGVIGLGRIGSIVAKRAKAFGM-KVLAYDPYISP--ERAEQLGV---EL--VDDLDELLARADFITVHTPLTPE 206 (525)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCh--hHHHhcCC---EE--cCCHHHHHhhCCEEEEccCCChh
Confidence 4789999999999999999999999998 59999985322 11233332 21 245677788999999998865
Q ss_pred -ccCCChhhhhcC
Q 010322 321 -APLFLKDHVQDL 332 (513)
Q Consensus 321 -~~vi~~~~l~~~ 332 (513)
..+++.+.+..+
T Consensus 207 T~~li~~~~l~~m 219 (525)
T TIGR01327 207 TRGLIGAEELAKM 219 (525)
T ss_pred hccCcCHHHHhcC
Confidence 457777777654
No 223
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.31 E-value=0.00069 Score=65.41 Aligned_cols=77 Identities=22% Similarity=0.275 Sum_probs=52.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCC---HH---------------HHHHHHHHhC----Ccceee----
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRS---EE---------------RVAAICEELN----GVEIIY---- 297 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs---~~---------------ra~~la~~~g----~~~~~~---- 297 (513)
+...+|+|+|+|.+|..++.+|...|+.+|+++|++ .. |++.+++.+. ...+..
T Consensus 19 L~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~ 98 (200)
T TIGR02354 19 LEQATVAICGLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEK 98 (200)
T ss_pred HhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeee
Confidence 467899999999999999999999999999999987 21 2222233221 111111
Q ss_pred cccchHHhhcCCCcEEEEcCCCC
Q 010322 298 KPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 298 ~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
...+++.+.+.++|+||+|+-.+
T Consensus 99 i~~~~~~~~~~~~DlVi~a~Dn~ 121 (200)
T TIGR02354 99 ITEENIDKFFKDADIVCEAFDNA 121 (200)
T ss_pred CCHhHHHHHhcCCCEEEECCCCH
Confidence 11234455678999999996554
No 224
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.30 E-value=0.0016 Score=72.52 Aligned_cols=133 Identities=18% Similarity=0.168 Sum_probs=77.4
Q ss_pred chHHHHHHHhHhcCcccchhhHHHHHHHhhCcc-ccccccccCCCchHHHHHHHHHHh--------hCC-CCCCCCCeEE
Q 010322 181 AQVKQVVKVGQGVVGFGRNISGLFKHAISVGKR-VRTETNIAAGAVSVSSAAVELALM--------KLP-ESSHATARML 250 (513)
Q Consensus 181 gQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~-Vr~et~i~~~~~Sva~~Av~la~~--------~~~-~~~l~g~~Vl 250 (513)
|+...|+...++.+-+...+.++... .+-.. .|. ..+.+|+.++++++.. ... .....|++|+
T Consensus 69 g~~~~a~~~~~~~np~~~~~grvc~~--~ce~~C~r~-----~~~~~v~i~~l~r~~~~~~~~~~~~~~~~~~~~g~~V~ 141 (564)
T PRK12771 69 GDYEYAWRRLTKDNPFPAVMGRVCYH--PCESGCNRG-----QVDDAVGINAVERFLGDYAIANGWKFPAPAPDTGKRVA 141 (564)
T ss_pred CCHHHHHHHHHHhCCcchHhhCcCCc--hhHHhccCC-----CCCCCcCHHHHHHHHHHHHHHcCCCCCCCCCCCCCEEE
Confidence 56778888888765554444333321 01111 111 2245666667666420 000 0134689999
Q ss_pred EEcccHHHHHHHHHHHHcCCCeEEEEeCCH--------------------HHHHHHHHHhCCcceeeccc--ch--HHhh
Q 010322 251 VIGAGKMGKLVIKHLVAKGCTKMVVVNRSE--------------------ERVAAICEELNGVEIIYKPL--SE--MLSC 306 (513)
Q Consensus 251 VIGaG~mG~~ia~~L~~~G~~~V~v~nRs~--------------------~ra~~la~~~g~~~~~~~~~--~~--~~~~ 306 (513)
|||+|++|..++..|...|++ |+++++.+ ....+.+.++|. .+.+... .+ ....
T Consensus 142 VIGaGpaGL~aA~~l~~~G~~-V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv-~~~~~~~~~~~~~~~~~ 219 (564)
T PRK12771 142 VIGGGPAGLSAAYHLRRMGHA-VTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGV-EVRLGVRVGEDITLEQL 219 (564)
T ss_pred EECCCHHHHHHHHHHHHCCCe-EEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCC-EEEeCCEECCcCCHHHH
Confidence 999999999999999999985 99998531 112244555663 2222211 11 2222
Q ss_pred cCCCcEEEEcCCCCcc
Q 010322 307 AADADVVFTSTASEAP 322 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~ 322 (513)
..++|+||.|||++.+
T Consensus 220 ~~~~D~Vi~AtG~~~~ 235 (564)
T PRK12771 220 EGEFDAVFVAIGAQLG 235 (564)
T ss_pred HhhCCEEEEeeCCCCC
Confidence 3468999999998754
No 225
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.30 E-value=0.00048 Score=70.03 Aligned_cols=159 Identities=23% Similarity=0.303 Sum_probs=93.8
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhch-H---------HHHHHHhHhcCcccchhhHHHHHHHhhCc--------cc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQ-V---------KQVVKVGQGVVGFGRNISGLFKHAISVGK--------RV 214 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQ-v---------k~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~V 214 (513)
..|+|+++.+..++++++.+-+|+....-. . ....+.|......|...++.|+.++.++. .+
T Consensus 57 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~ 136 (332)
T cd08259 57 ILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNV 136 (332)
T ss_pred eccccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCC
Confidence 579999999999999998888999877521 0 01122222222222222444544444433 22
Q ss_pred ccccccc-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC
Q 010322 215 RTETNIA-AGAVSVSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG 292 (513)
Q Consensus 215 r~et~i~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~ 292 (513)
..+.... ..+...++.++..+ ....+.+|+|.|+ |.+|.++++.++..|+. |+++.+++++.+.+ ..++.
T Consensus 137 ~~~~~~~~~~~~~ta~~~l~~~------~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~-v~~~~~~~~~~~~~-~~~~~ 208 (332)
T cd08259 137 SDESAALAACVVGTAVHALKRA------GVKKGDTVLVTGAGGGVGIHAIQLAKALGAR-VIAVTRSPEKLKIL-KELGA 208 (332)
T ss_pred CHHHHhhhccHHHHHHHHHHHh------CCCCCCEEEEECCCCHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHH-HHcCC
Confidence 2111111 12233344444331 2246889999998 99999999999999985 88888888877444 55553
Q ss_pred cceeecccchHHh---hcCCCcEEEEcCCCCc
Q 010322 293 VEIIYKPLSEMLS---CAADADVVFTSTASEA 321 (513)
Q Consensus 293 ~~~~~~~~~~~~~---~l~~aDVVI~AT~s~~ 321 (513)
. .+...++..+ ...+.|+||+|++...
T Consensus 209 ~--~~~~~~~~~~~~~~~~~~d~v~~~~g~~~ 238 (332)
T cd08259 209 D--YVIDGSKFSEDVKKLGGADVVIELVGSPT 238 (332)
T ss_pred c--EEEecHHHHHHHHhccCCCEEEECCChHH
Confidence 1 1122211111 1237999999998754
No 226
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=97.30 E-value=0.0015 Score=65.04 Aligned_cols=119 Identities=14% Similarity=0.204 Sum_probs=79.9
Q ss_pred CchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCC----------eEEEEeCC----HHH--H----
Q 010322 224 AVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCT----------KMVVVNRS----EER--V---- 283 (513)
Q Consensus 224 ~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~----------~V~v~nRs----~~r--a---- 283 (513)
+-+|..+++--+-+..+ ..+.+.+|+++|+|..|..++..|...+++ +|+++|+. .+| .
T Consensus 4 TaaV~lAgllnAlk~~g-~~l~d~riv~~GAGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~ 82 (254)
T cd00762 4 TASVAVAGLLAALKVTK-KKISEHKVLFNGAGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNE 82 (254)
T ss_pred hHHHHHHHHHHHHHHhC-CChhhcEEEEECcCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHH
Confidence 33444444433333333 568899999999999999999999987775 89998874 111 1
Q ss_pred HHHHHHhCCcceeecccchHHhhcC--CCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 284 AAICEELNGVEIIYKPLSEMLSCAA--DADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 284 ~~la~~~g~~~~~~~~~~~~~~~l~--~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
..++ ++.. .-.+..++.++++ ++|++|-+++.+ .+|+++.++.+.+. ..+.+++-||.|-
T Consensus 83 ~~~~-~~~~---~~~~~~~L~eav~~~kptvlIG~S~~~-g~ft~evv~~Ma~~----~~~PIIFaLSNPt 144 (254)
T cd00762 83 YHLA-RFAN---PERESGDLEDAVEAAKPDFLIGVSRVG-GAFTPEVIRAXAEI----NERPVIFALSNPT 144 (254)
T ss_pred HHHH-HHcC---cccccCCHHHHHHhhCCCEEEEeCCCC-CCCCHHHHHHHhhc----CCCCEEEECCCcC
Confidence 1222 1211 1123357788888 999999988865 47889999876532 3457888898884
No 227
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.29 E-value=0.00066 Score=68.72 Aligned_cols=68 Identities=21% Similarity=0.206 Sum_probs=50.7
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
+|.|||+|.||..++..|...|. +|++++|++++.+.+. ..+.. .. ...+. +.+.++|+||.|++...
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~-~~g~~--~~-~~~~~-~~~~~aDlVilavp~~~ 69 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAI-ERGLV--DE-ASTDL-SLLKDCDLVILALPIGL 69 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH-HCCCc--cc-ccCCH-hHhcCCCEEEEcCCHHH
Confidence 69999999999999999999997 5999999988775543 33321 11 11222 34678999999998653
No 228
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=97.28 E-value=0.00069 Score=79.50 Aligned_cols=76 Identities=14% Similarity=0.267 Sum_probs=58.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcC-CC------------eEEEEeCCHHHHHHHHHHhCCc-cee--ecccchHHhhcC
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKG-CT------------KMVVVNRSEERVAAICEELNGV-EII--YKPLSEMLSCAA 308 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G-~~------------~V~v~nRs~~ra~~la~~~g~~-~~~--~~~~~~~~~~l~ 308 (513)
..++|+|||||.||+.++.+|...+ +. .|+|++++.++++++++.+.+. .+. +.+.+++.+.+.
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 4679999999999999999998753 22 3999999999999998877321 112 223455666678
Q ss_pred CCcEEEEcCCCC
Q 010322 309 DADVVFTSTASE 320 (513)
Q Consensus 309 ~aDVVI~AT~s~ 320 (513)
++|+||+|+|..
T Consensus 648 ~~DaVIsalP~~ 659 (1042)
T PLN02819 648 QVDVVISLLPAS 659 (1042)
T ss_pred CCCEEEECCCch
Confidence 899999999974
No 229
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=97.28 E-value=0.0011 Score=70.21 Aligned_cols=135 Identities=18% Similarity=0.213 Sum_probs=80.2
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHH--HHH--------HhHhcCcccc-hhhHHHHHHHhhCc--------c
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQ--VVK--------VGQGVVGFGR-NISGLFKHAISVGK--------R 213 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~--A~~--------~a~~~~~~g~-~L~~lf~~ai~v~k--------~ 213 (513)
..|||+++.+.+++++++.+-+|+..+....-. -.. .|......|. ..++.|++++.++. .
T Consensus 80 v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~ 159 (398)
T TIGR01751 80 IIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKH 159 (398)
T ss_pred ecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCC
Confidence 579999999999999999999999887642100 011 1111100110 01344544444433 2
Q ss_pred cccccccc-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC
Q 010322 214 VRTETNIA-AGAVSVSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN 291 (513)
Q Consensus 214 Vr~et~i~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g 291 (513)
+..+.... ..+...++.++.... .. ....|.+|+|.|+ |.+|.++++.++..|++ ++++.++.++. ++++++|
T Consensus 160 l~~~~aa~~~~~~~ta~~al~~~~-~~--~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~-vi~~~~~~~~~-~~~~~~g 234 (398)
T TIGR01751 160 LTWEEAACPGLTGATAYRQLVGWN-PA--TVKPGDNVLIWGAAGGLGSYATQLARAGGGN-PVAVVSSPEKA-EYCRELG 234 (398)
T ss_pred CCHHHHhhccchHHHHHHHHhhhh-cc--CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCe-EEEEcCCHHHH-HHHHHcC
Confidence 22222111 123344454432110 01 2246899999998 99999999999999996 66677887776 5556676
Q ss_pred C
Q 010322 292 G 292 (513)
Q Consensus 292 ~ 292 (513)
.
T Consensus 235 ~ 235 (398)
T TIGR01751 235 A 235 (398)
T ss_pred C
Confidence 4
No 230
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=97.28 E-value=0.00038 Score=69.31 Aligned_cols=102 Identities=20% Similarity=0.321 Sum_probs=69.4
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHHc----CC------CeEEEEeCC----HHH------HHHHHHHhCCcceeecccc
Q 010322 242 SSHATARMLVIGAGKMGKLVIKHLVAK----GC------TKMVVVNRS----EER------VAAICEELNGVEIIYKPLS 301 (513)
Q Consensus 242 ~~l~g~~VlVIGaG~mG~~ia~~L~~~----G~------~~V~v~nRs----~~r------a~~la~~~g~~~~~~~~~~ 301 (513)
.++.+.+++++|+|..|..++..|... |. ++|+++|+. .+| ...+++... ....+.
T Consensus 21 ~~l~d~riv~~GAGsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~----~~~~~~ 96 (255)
T PF03949_consen 21 KKLSDQRIVFFGAGSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTN----PEKDWG 96 (255)
T ss_dssp S-GGG-EEEEEB-SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSS----TTT--S
T ss_pred CCHHHcEEEEeCCChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCc----cccccc
Confidence 568899999999999999999999887 99 789999984 111 123333211 111124
Q ss_pred hHHhhcCCC--cEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 302 EMLSCAADA--DVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 302 ~~~~~l~~a--DVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
++.++++++ |++|-+++.+ .+|+++.++.+.+. ..+.+++-||.|-
T Consensus 97 ~L~eav~~~kPtvLIG~S~~~-g~ft~evv~~Ma~~----~erPIIF~LSNPt 144 (255)
T PF03949_consen 97 SLLEAVKGAKPTVLIGLSGQG-GAFTEEVVRAMAKH----NERPIIFPLSNPT 144 (255)
T ss_dssp SHHHHHHCH--SEEEECSSST-TSS-HHHHHHCHHH----SSSEEEEE-SSSC
T ss_pred CHHHHHHhcCCCEEEEecCCC-CcCCHHHHHHHhcc----CCCCEEEECCCCC
Confidence 778888887 9999998855 46899999886532 3458899999884
No 231
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=97.27 E-value=0.0023 Score=65.53 Aligned_cols=156 Identities=14% Similarity=0.064 Sum_probs=87.2
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccCCCch--HHH
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAAGAVS--VSS 229 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~~~~S--va~ 229 (513)
...|+|+++.+.+|++++..+-+|+..+.... ....|.+..+..---...+.++..+..+.... -+.+ .++
T Consensus 60 ~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~-~~~~~~ta~ 132 (336)
T TIGR02817 60 KILGWDAAGVVVAVGDEVTLFKPGDEVWYAGD------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAA-LPLTSITAW 132 (336)
T ss_pred cccceeeEEEEEEeCCCCCCCCCCCEEEEcCC------CCCCCcccceEEEcHHHcccCCCCCCHHHHhh-hhHHHHHHH
Confidence 35699999999999999998889998874210 00011111111000011223333332222211 1222 223
Q ss_pred HHHHHHHhhCCCCCCC-----CCeEEEEcc-cHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhCCcceeecccch
Q 010322 230 AAVELALMKLPESSHA-----TARMLVIGA-GKMGKLVIKHLVAK-GCTKMVVVNRSEERVAAICEELNGVEIIYKPLSE 302 (513)
Q Consensus 230 ~Av~la~~~~~~~~l~-----g~~VlVIGa-G~mG~~ia~~L~~~-G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~ 302 (513)
.++.. .. .-.. |.+|+|.|+ |.+|.++++.++.. |++ |+.+.++.++.+. +.++|.. ..+....+
T Consensus 133 ~~l~~---~~--~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~-vi~~~~~~~~~~~-l~~~g~~-~~~~~~~~ 204 (336)
T TIGR02817 133 ELLFD---RL--GINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLT-VIATASRPESQEW-VLELGAH-HVIDHSKP 204 (336)
T ss_pred HHHHH---hc--CCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCE-EEEEcCcHHHHHH-HHHcCCC-EEEECCCC
Confidence 33211 11 1112 889999996 99999999999987 885 8888888887744 4667742 11211112
Q ss_pred HHhh---c--CCCcEEEEcCCCCcc
Q 010322 303 MLSC---A--ADADVVFTSTASEAP 322 (513)
Q Consensus 303 ~~~~---l--~~aDVVI~AT~s~~~ 322 (513)
.... + .+.|+|+++++.+..
T Consensus 205 ~~~~i~~~~~~~vd~vl~~~~~~~~ 229 (336)
T TIGR02817 205 LKAQLEKLGLEAVSYVFSLTHTDQH 229 (336)
T ss_pred HHHHHHHhcCCCCCEEEEcCCcHHH
Confidence 2111 2 368999999866544
No 232
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.27 E-value=0.00098 Score=68.48 Aligned_cols=74 Identities=19% Similarity=0.240 Sum_probs=53.0
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----------HhCCcc--------eeecccchHHhhcC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICE----------ELNGVE--------IIYKPLSEMLSCAA 308 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~----------~~g~~~--------~~~~~~~~~~~~l~ 308 (513)
++|.|||+|.||..++..|...|. +|+++||+++..+.... ..|... ..+....++.+.+.
T Consensus 3 ~~V~VIG~G~mG~~iA~~la~~G~-~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~ 81 (308)
T PRK06129 3 GSVAIIGAGLIGRAWAIVFARAGH-EVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVA 81 (308)
T ss_pred cEEEEECccHHHHHHHHHHHHCCC-eeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhC
Confidence 479999999999999999999998 59999999876644221 111100 00122346666778
Q ss_pred CCcEEEEcCCCCc
Q 010322 309 DADVVFTSTASEA 321 (513)
Q Consensus 309 ~aDVVI~AT~s~~ 321 (513)
++|+||.|++...
T Consensus 82 ~ad~Vi~avpe~~ 94 (308)
T PRK06129 82 DADYVQESAPENL 94 (308)
T ss_pred CCCEEEECCcCCH
Confidence 9999999998753
No 233
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=97.27 E-value=0.00081 Score=67.74 Aligned_cols=69 Identities=13% Similarity=0.278 Sum_probs=53.9
Q ss_pred CeEEEEcccHHHHHHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAK--GCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~--G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
.+|.|||+|.||..++..+... ++.-+.+++|++++++.+++.++. . .+++..+.+.++|+|+.||+..
T Consensus 2 mrIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~---~--~~~~~~ell~~~DvVvi~a~~~ 72 (265)
T PRK13304 2 LKIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGA---K--ACLSIDELVEDVDLVVECASVN 72 (265)
T ss_pred CEEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCC---e--eECCHHHHhcCCCEEEEcCChH
Confidence 3799999999999999998875 455577899999999888887653 1 2345555567899999998653
No 234
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.27 E-value=0.00065 Score=69.17 Aligned_cols=74 Identities=20% Similarity=0.305 Sum_probs=51.6
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh----------CCcc--------eeecccchHHhhcC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL----------NGVE--------IIYKPLSEMLSCAA 308 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~----------g~~~--------~~~~~~~~~~~~l~ 308 (513)
++|.|||+|.||..+|..+...|. +|+++|++++..+...+.+ |... ..+....++ +.+.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~ 83 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDL-GDFA 83 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCH-HHhC
Confidence 489999999999999999999998 5999999998765421111 1100 011122344 4478
Q ss_pred CCcEEEEcCCCCcc
Q 010322 309 DADVVFTSTASEAP 322 (513)
Q Consensus 309 ~aDVVI~AT~s~~~ 322 (513)
++|+||+|.+-...
T Consensus 84 ~~d~ViEav~E~~~ 97 (286)
T PRK07819 84 DRQLVIEAVVEDEA 97 (286)
T ss_pred CCCEEEEecccCHH
Confidence 99999999776543
No 235
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=97.27 E-value=0.002 Score=66.40 Aligned_cols=95 Identities=19% Similarity=0.271 Sum_probs=63.8
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc--chHHhhc-----CCCcEEEE
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL--SEMLSCA-----ADADVVFT 315 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~--~~~~~~l-----~~aDVVI~ 315 (513)
..|++|+|.|+ |.+|.++++.++..|++ |+++.++.++.+.+.+.+|... .+... ++..+.+ .++|+||+
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~-Vi~~~~~~~~~~~~~~~lGa~~-vi~~~~~~~~~~~i~~~~~~gvd~v~d 227 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGCY-VVGSAGSDEKVDLLKNKLGFDD-AFNYKEEPDLDAALKRYFPNGIDIYFD 227 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCce-eEEcCCcccHHHHHHHhCCCCcEEEEE
Confidence 47899999998 99999999999999995 8888898888755444377421 22211 1222211 47899999
Q ss_pred cCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 316 STASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 316 AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
+++.. .+ .+.++.+. ++|..+.++.
T Consensus 228 ~~g~~-~~--~~~~~~l~-----~~G~iv~~G~ 252 (338)
T cd08295 228 NVGGK-ML--DAVLLNMN-----LHGRIAACGM 252 (338)
T ss_pred CCCHH-HH--HHHHHHhc-----cCcEEEEecc
Confidence 99863 32 34455443 3566666653
No 236
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.27 E-value=0.00063 Score=72.77 Aligned_cols=80 Identities=11% Similarity=0.163 Sum_probs=60.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC--
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE-- 320 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~-- 320 (513)
.+.|++|+|||.|.||+.+|+.+...|. +|..++|+... ..+. +....++.+.+..+|+|+.+.+..
T Consensus 148 ~L~gktvGIiG~G~IG~~vA~~~~~fGm-~V~~~d~~~~~------~~~~----~~~~~~l~ell~~sDiVslh~Plt~~ 216 (409)
T PRK11790 148 EVRGKTLGIVGYGHIGTQLSVLAESLGM-RVYFYDIEDKL------PLGN----ARQVGSLEELLAQSDVVSLHVPETPS 216 (409)
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCccc------ccCC----ceecCCHHHHHhhCCEEEEcCCCChH
Confidence 5789999999999999999999999999 49999986421 1111 112346777888999999997764
Q ss_pred -ccCCChhhhhcCC
Q 010322 321 -APLFLKDHVQDLP 333 (513)
Q Consensus 321 -~~vi~~~~l~~~~ 333 (513)
..+|+.+.+..+.
T Consensus 217 T~~li~~~~l~~mk 230 (409)
T PRK11790 217 TKNMIGAEELALMK 230 (409)
T ss_pred HhhccCHHHHhcCC
Confidence 3577777776653
No 237
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=97.26 E-value=0.0016 Score=66.08 Aligned_cols=152 Identities=13% Similarity=0.137 Sum_probs=89.4
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCcccccccccc-CCCchHHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIA-AGAVSVSSAA 231 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~-~~~~Sva~~A 231 (513)
..|+++++.+.+++++++..-+|++.+.... .|..+.+...-....+.++..+....... .-+...++.+
T Consensus 59 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~ 129 (323)
T cd05282 59 VPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLM 129 (323)
T ss_pred cCCcceEEEEEEeCCCCCCCCCCCEEEEeCC---------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHH
Confidence 5799999999999999998889998775321 12222222111122233333222211111 0111223333
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc-h----HHh
Q 010322 232 VELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS-E----MLS 305 (513)
Q Consensus 232 v~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~-~----~~~ 305 (513)
+... . ....|.+|+|+|+ |.+|.++++.++..|++ ++++.++.++. ++++++|.. ..+...+ + +..
T Consensus 130 ~~~~----~-~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~-v~~~~~~~~~~-~~~~~~g~~-~~~~~~~~~~~~~~~~ 201 (323)
T cd05282 130 LTEY----L-KLPPGDWVIQNAANSAVGRMLIQLAKLLGFK-TINVVRRDEQV-EELKALGAD-EVIDSSPEDLAQRVKE 201 (323)
T ss_pred HHHh----c-cCCCCCEEEEcccccHHHHHHHHHHHHCCCe-EEEEecChHHH-HHHHhcCCC-EEecccchhHHHHHHH
Confidence 2211 1 1246889999998 89999999999999986 77888888776 445677642 1121111 1 222
Q ss_pred hc--CCCcEEEEcCCCCc
Q 010322 306 CA--ADADVVFTSTASEA 321 (513)
Q Consensus 306 ~l--~~aDVVI~AT~s~~ 321 (513)
.. .++|+|++|++...
T Consensus 202 ~~~~~~~d~vl~~~g~~~ 219 (323)
T cd05282 202 ATGGAGARLALDAVGGES 219 (323)
T ss_pred HhcCCCceEEEECCCCHH
Confidence 22 46999999999754
No 238
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.26 E-value=0.001 Score=73.48 Aligned_cols=81 Identities=19% Similarity=0.161 Sum_probs=60.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC--
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE-- 320 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~-- 320 (513)
.+.|++|+|||.|.||+.+++.|+..|+ +|.+++|+.... .+..++. ... ++.+.+..+|+|+.+++.+
T Consensus 137 ~l~gktvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~--~~~~~g~---~~~---~l~ell~~aDiV~l~lP~t~~ 207 (526)
T PRK13581 137 ELYGKTLGIIGLGRIGSEVAKRAKAFGM-KVIAYDPYISPE--RAAQLGV---ELV---SLDELLARADFITLHTPLTPE 207 (526)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCChh--HHHhcCC---EEE---cHHHHHhhCCEEEEccCCChH
Confidence 4689999999999999999999999999 599999864321 1223332 222 5667788999999998875
Q ss_pred -ccCCChhhhhcC
Q 010322 321 -APLFLKDHVQDL 332 (513)
Q Consensus 321 -~~vi~~~~l~~~ 332 (513)
..+++.+.+..+
T Consensus 208 t~~li~~~~l~~m 220 (526)
T PRK13581 208 TRGLIGAEELAKM 220 (526)
T ss_pred hhcCcCHHHHhcC
Confidence 346776666654
No 239
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.25 E-value=0.00088 Score=64.96 Aligned_cols=76 Identities=20% Similarity=0.273 Sum_probs=54.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHH-HHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEE-RVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~-ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
++.|++|+|||+|.+|..-++.|...|+ +|+|++.+.. ....+++. +. +.+..-+-....+.++|+||.||+.+.
T Consensus 6 ~l~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~-~~--i~~~~~~~~~~dl~~~~lVi~at~d~~ 81 (205)
T TIGR01470 6 NLEGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQ-GG--ITWLARCFDADILEGAFLVIAATDDEE 81 (205)
T ss_pred EcCCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHc-CC--EEEEeCCCCHHHhCCcEEEEECCCCHH
Confidence 5789999999999999999999999998 4999988653 33455443 22 333221111334689999999999874
Q ss_pred c
Q 010322 322 P 322 (513)
Q Consensus 322 ~ 322 (513)
.
T Consensus 82 l 82 (205)
T TIGR01470 82 L 82 (205)
T ss_pred H
Confidence 3
No 240
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.25 E-value=0.00074 Score=68.72 Aligned_cols=75 Identities=20% Similarity=0.326 Sum_probs=52.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh----------CCcc--------eeecccchHHhhc
Q 010322 246 TARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL----------NGVE--------IIYKPLSEMLSCA 307 (513)
Q Consensus 246 g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~----------g~~~--------~~~~~~~~~~~~l 307 (513)
-++|.|||+|.||..++..|...|. +|+++++++++++...+.+ +... ..+...++. +.+
T Consensus 4 ~~kI~vIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 81 (292)
T PRK07530 4 IKKVGVIGAGQMGNGIAHVCALAGY-DVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDL-EDL 81 (292)
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCH-HHh
Confidence 3689999999999999999999998 5999999988775533211 1100 001122344 346
Q ss_pred CCCcEEEEcCCCCcc
Q 010322 308 ADADVVFTSTASEAP 322 (513)
Q Consensus 308 ~~aDVVI~AT~s~~~ 322 (513)
.++|+||.|++....
T Consensus 82 ~~aD~Vieavpe~~~ 96 (292)
T PRK07530 82 ADCDLVIEAATEDET 96 (292)
T ss_pred cCCCEEEEcCcCCHH
Confidence 899999999987643
No 241
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=97.25 E-value=0.0028 Score=64.27 Aligned_cols=171 Identities=17% Similarity=0.189 Sum_probs=96.6
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccC-CCchHHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAA-GAVSVSSAA 231 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~-~~~Sva~~A 231 (513)
..|+|+++.+..+++++...-+|+..+.... ...|....+...--...+.+++.+..+..... -+..+++..
T Consensus 62 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~ 134 (324)
T cd08244 62 VPGGEVAGVVDAVGPGVDPAWLGRRVVAHTG-------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGL 134 (324)
T ss_pred CCccceEEEEEEeCCCCCCCCCCCEEEEccC-------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHH
Confidence 5799999999999998887788987665311 01122222111111122333333322221111 111222222
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc-h----HHh
Q 010322 232 VELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS-E----MLS 305 (513)
Q Consensus 232 v~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~-~----~~~ 305 (513)
+..+ ....+.+|+|.|+ |.+|.++++.++..|++ |+++.++.++.+ ++..++.. ..+...+ + +..
T Consensus 135 ~~~~------~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~-v~~~~~~~~~~~-~~~~~g~~-~~~~~~~~~~~~~~~~ 205 (324)
T cd08244 135 LDLA------TLTPGDVVLVTAAAGGLGSLLVQLAKAAGAT-VVGAAGGPAKTA-LVRALGAD-VAVDYTRPDWPDQVRE 205 (324)
T ss_pred HHhc------CCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHH-HHHHcCCC-EEEecCCccHHHHHHH
Confidence 2221 1236889999995 99999999999999985 888899888874 44667642 1121111 1 222
Q ss_pred hc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 306 CA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 306 ~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
.. .++|+|++|++.+.. ...++.+. .+|..+.+.
T Consensus 206 ~~~~~~~d~vl~~~g~~~~---~~~~~~l~-----~~g~~v~~g 241 (324)
T cd08244 206 ALGGGGVTVVLDGVGGAIG---RAALALLA-----PGGRFLTYG 241 (324)
T ss_pred HcCCCCceEEEECCChHhH---HHHHHHhc-----cCcEEEEEe
Confidence 22 369999999987532 34454443 245555554
No 242
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.23 E-value=0.0023 Score=65.87 Aligned_cols=177 Identities=17% Similarity=0.198 Sum_probs=98.4
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHH--HHHhHhcCcccchhhHHHHHHHhhCc--------cccccccc-c
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQV--VKVGQGVVGFGRNISGLFKHAISVGK--------RVRTETNI-A 221 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A--~~~a~~~~~~g~~L~~lf~~ai~v~k--------~Vr~et~i-~ 221 (513)
..|||+++.+.+|++++..+.+|++.+....... ...+.....+|...++.|+.++.++. .+...... .
T Consensus 80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l 159 (350)
T cd08274 80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATF 159 (350)
T ss_pred ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhc
Confidence 4799999999999999998899998876321000 00011111122222344444333332 22211111 1
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc
Q 010322 222 AGAVSVSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL 300 (513)
Q Consensus 222 ~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~ 300 (513)
..+...++.++..+ ...+|.+|+|.|+ |.+|.+++..++..|++ ++++.++. +. .+++++|. .......
T Consensus 160 ~~~~~ta~~~~~~~------~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~-~~~~~~g~-~~~~~~~ 229 (350)
T cd08274 160 PCSYSTAENMLERA------GVGAGETVLVTGASGGVGSALVQLAKRRGAI-VIAVAGAA-KE-EAVRALGA-DTVILRD 229 (350)
T ss_pred ccHHHHHHHHHhhc------CCCCCCEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hh-HHHHhcCC-eEEEeCC
Confidence 12233344444322 2346899999999 99999999999999997 66666654 55 45567764 2111111
Q ss_pred c-hH--Hhh--cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 301 S-EM--LSC--AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 301 ~-~~--~~~--l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
. .. ... -.++|+||+|++.. .+ ...++.+. .+|..+.++
T Consensus 230 ~~~~~~~~~~~~~~~d~vi~~~g~~-~~--~~~~~~l~-----~~G~~v~~g 273 (350)
T cd08274 230 APLLADAKALGGEPVDVVADVVGGP-LF--PDLLRLLR-----PGGRYVTAG 273 (350)
T ss_pred CccHHHHHhhCCCCCcEEEecCCHH-HH--HHHHHHhc-----cCCEEEEec
Confidence 1 11 111 14699999999864 22 33444433 356555554
No 243
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.22 E-value=0.0016 Score=66.09 Aligned_cols=92 Identities=20% Similarity=0.288 Sum_probs=67.6
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHH--cCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchH
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVA--KGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEM 303 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~--~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~ 303 (513)
++.+.+++.+. ++ .++.|++|+|||. +-+|+-++..|.. .|++ |+++.... .++
T Consensus 141 Tp~av~~ll~~-~~-i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~at-Vtvchs~T--------------------~~l 197 (284)
T PRK14193 141 TPRGIVHLLRR-YD-VELAGAHVVVIGRGVTVGRPIGLLLTRRSENAT-VTLCHTGT--------------------RDL 197 (284)
T ss_pred CHHHHHHHHHH-hC-CCCCCCEEEEECCCCcchHHHHHHHhhccCCCE-EEEeCCCC--------------------CCH
Confidence 34444566543 32 4689999999999 7789999999987 6774 88886531 134
Q ss_pred HhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 304 LSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 304 ~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
.+.++.||+||+|+|.|.. ++.++++. | .++||.++.+
T Consensus 198 ~~~~k~ADIvV~AvGkp~~-i~~~~ik~---------G-avVIDvGin~ 235 (284)
T PRK14193 198 AAHTRRADIIVAAAGVAHL-VTADMVKP---------G-AAVLDVGVSR 235 (284)
T ss_pred HHHHHhCCEEEEecCCcCc-cCHHHcCC---------C-CEEEEccccc
Confidence 4556789999999999965 67788743 3 7899998765
No 244
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=97.22 E-value=0.00023 Score=62.76 Aligned_cols=112 Identities=19% Similarity=0.295 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc-c----hHHhhcC--CCcEEEEcCCCCccCCChhh
Q 010322 256 KMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL-S----EMLSCAA--DADVVFTSTASEAPLFLKDH 328 (513)
Q Consensus 256 ~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~-~----~~~~~l~--~aDVVI~AT~s~~~vi~~~~ 328 (513)
++|..+++.++..| .+|++++++++|. ++++++|... .+... . .+.+... ++|+||+|+|++..+ ...
T Consensus 1 ~vG~~a~q~ak~~G-~~vi~~~~~~~k~-~~~~~~Ga~~-~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~--~~~ 75 (130)
T PF00107_consen 1 GVGLMAIQLAKAMG-AKVIATDRSEEKL-ELAKELGADH-VIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTL--QEA 75 (130)
T ss_dssp HHHHHHHHHHHHTT-SEEEEEESSHHHH-HHHHHTTESE-EEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHH--HHH
T ss_pred ChHHHHHHHHHHcC-CEEEEEECCHHHH-HHHHhhcccc-cccccccccccccccccccccceEEEEecCcHHHH--HHH
Confidence 58999999999999 5799999998887 7788888432 22221 1 2223333 699999999987654 445
Q ss_pred hhcCCchhhhcCCcEEEEeccCCCCCCccc-------ccccCeEEEccCCHHHHHH
Q 010322 329 VQDLPPVEAAVGGLRLFIDISVPRNVGSCV-------ADVETARVYNVDDLKEVVA 377 (513)
Q Consensus 329 l~~~~~~~~~~~g~~viiDlavPrdidp~v-------~~l~gv~ly~iDdl~~v~~ 377 (513)
++.+. ++|+.+++.+.-..++.... ..+-|+..++.++++++++
T Consensus 76 ~~~l~-----~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 126 (130)
T PF00107_consen 76 IKLLR-----PGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQ 126 (130)
T ss_dssp HHHEE-----EEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHH
T ss_pred HHHhc-----cCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHH
Confidence 54442 46777777764201111111 1344555666666666544
No 245
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.22 E-value=0.0013 Score=59.87 Aligned_cols=75 Identities=20% Similarity=0.324 Sum_probs=55.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhCCc----ceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 247 ARMLVIGA-GKMGKLVIKHLVAKGC-TKMVVVNRSEERVAAICEELNGV----EIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 247 ~~VlVIGa-G~mG~~ia~~L~~~G~-~~V~v~nRs~~ra~~la~~~g~~----~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
.+|.|||+ |.+|..++..|...|. .+|.++|++.++++..+..+... ........+..+.+.++|+||.+.+.+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~ 80 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP 80 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence 37999999 9999999999999876 57999999988877766655311 011111224566688999999998876
Q ss_pred c
Q 010322 321 A 321 (513)
Q Consensus 321 ~ 321 (513)
.
T Consensus 81 ~ 81 (141)
T PF00056_consen 81 R 81 (141)
T ss_dssp S
T ss_pred c
Confidence 3
No 246
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.22 E-value=0.0015 Score=66.03 Aligned_cols=91 Identities=19% Similarity=0.317 Sum_probs=67.9
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEccc-HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhh
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGAG-KMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSC 306 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGaG-~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~ 306 (513)
+.+.+++.+. .+ .++.|++|+|+|.| ..|+.++..|...|+. |+++.++.. ++.+.
T Consensus 136 p~av~~ll~~-~~-i~l~Gk~V~ViGrs~~vGrpla~lL~~~~at-Vtv~hs~t~--------------------~L~~~ 192 (279)
T PRK14178 136 PNGIMTLLHE-YK-ISIAGKRAVVVGRSIDVGRPMAALLLNADAT-VTICHSKTE--------------------NLKAE 192 (279)
T ss_pred HHHHHHHHHH-cC-CCCCCCEEEEECCCccccHHHHHHHHhCCCe-eEEEecChh--------------------HHHHH
Confidence 3344566543 32 47899999999997 9999999999999985 888876532 23444
Q ss_pred cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 307 AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
+..||+||+|+|.+ .+++.++++. | .++||+++-+
T Consensus 193 ~~~ADIvI~Avgk~-~lv~~~~vk~---------G-avVIDVgi~~ 227 (279)
T PRK14178 193 LRQADILVSAAGKA-GFITPDMVKP---------G-ATVIDVGINQ 227 (279)
T ss_pred HhhCCEEEECCCcc-cccCHHHcCC---------C-cEEEEeeccc
Confidence 57899999999988 5678888632 2 6899998654
No 247
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=97.22 E-value=0.0011 Score=67.77 Aligned_cols=67 Identities=16% Similarity=0.304 Sum_probs=51.3
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCcc
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
+|.|||.|.||..+++.|...|. +|+++||++. ++.+. ..|. . ...+..+....+|+||.|++.+..
T Consensus 2 ~Ig~IGlG~MG~~ma~~L~~~G~-~v~v~~~~~~-~~~~~-~~g~---~--~~~s~~~~~~~advVi~~v~~~~~ 68 (292)
T PRK15059 2 KLGFIGLGIMGTPMAINLARAGH-QLHVTTIGPV-ADELL-SLGA---V--SVETARQVTEASDIIFIMVPDTPQ 68 (292)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEeCCHh-HHHHH-HcCC---e--ecCCHHHHHhcCCEEEEeCCChHH
Confidence 69999999999999999999997 5999999974 44554 3342 1 223445566799999999998743
No 248
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.22 E-value=0.0015 Score=66.15 Aligned_cols=92 Identities=20% Similarity=0.308 Sum_probs=69.0
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHh
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLS 305 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~ 305 (513)
++.+.+++.+. ++ .++.|++|+|||. +-+|+-++..|...|+. |+++.... .++.+
T Consensus 141 Tp~av~~lL~~-~~-i~l~Gk~vvViGrS~iVG~Pla~lL~~~~at-Vt~chs~t--------------------~~l~~ 197 (284)
T PRK14190 141 TPHGILELLKE-YN-IDISGKHVVVVGRSNIVGKPVGQLLLNENAT-VTYCHSKT--------------------KNLAE 197 (284)
T ss_pred CHHHHHHHHHH-cC-CCCCCCEEEEECCCCccHHHHHHHHHHCCCE-EEEEeCCc--------------------hhHHH
Confidence 44445566544 32 4789999999999 77899999999999985 88885321 13344
Q ss_pred hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 306 CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
.+..||+||+|+|.+.. ++.++++. | .++||.++++
T Consensus 198 ~~~~ADIvI~AvG~p~~-i~~~~ik~---------g-avVIDvGi~~ 233 (284)
T PRK14190 198 LTKQADILIVAVGKPKL-ITADMVKE---------G-AVVIDVGVNR 233 (284)
T ss_pred HHHhCCEEEEecCCCCc-CCHHHcCC---------C-CEEEEeeccc
Confidence 56789999999999984 67888743 3 7899998766
No 249
>PRK12861 malic enzyme; Reviewed
Probab=97.21 E-value=0.0018 Score=73.66 Aligned_cols=134 Identities=17% Similarity=0.249 Sum_probs=92.1
Q ss_pred HHHHhhCcccccccccc------CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCC--eEEEE
Q 010322 205 KHAISVGKRVRTETNIA------AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCT--KMVVV 276 (513)
Q Consensus 205 ~~ai~v~k~Vr~et~i~------~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~--~V~v~ 276 (513)
.+++.+=++.+.+..+. +++.+|..+++--|-+..+ .++.+.+|++.|||..|..+++.|...|++ +|+++
T Consensus 143 p~~f~il~~~~~~~~ipvf~DD~qGTa~v~lA~llnal~~~g-k~l~d~~iv~~GAGaAg~~ia~~l~~~G~~~~~i~~~ 221 (764)
T PRK12861 143 PECFTVERKLRERMKIPVFHDDQHGTAITVSAAFINGLKVVG-KSIKEVKVVTSGAGAAALACLDLLVDLGLPVENIWVT 221 (764)
T ss_pred chHHHHHHHHHhcCCCCeeccccchHHHHHHHHHHHHHHHhC-CChhHcEEEEECHhHHHHHHHHHHHHcCCChhhEEEE
Confidence 44555555555443332 4566666666544444433 567889999999999999999999999995 89999
Q ss_pred eCC------------HHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEE
Q 010322 277 NRS------------EERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL 344 (513)
Q Consensus 277 nRs------------~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~v 344 (513)
|+. +.+ ..+++.. ...++.+++.++||.|-+++ + .+|++++++.+. ..++
T Consensus 222 D~~Gli~~~r~~~l~~~k-~~~a~~~--------~~~~L~eai~~advliG~S~-~-g~ft~e~v~~Ma-------~~PI 283 (764)
T PRK12861 222 DIEGVVYRGRTTLMDPDK-ERFAQET--------DARTLAEVIGGADVFLGLSA-G-GVLKAEMLKAMA-------ARPL 283 (764)
T ss_pred cCCCeeeCCCcccCCHHH-HHHHhhc--------CCCCHHHHHhcCCEEEEcCC-C-CCCCHHHHHHhc-------cCCE
Confidence 942 112 2444431 23578888999999999875 3 578999998864 2478
Q ss_pred EEeccCCC-CCCcc
Q 010322 345 FIDISVPR-NVGSC 357 (513)
Q Consensus 345 iiDlavPr-didp~ 357 (513)
++-+|.|- .+.|+
T Consensus 284 IFaLsNPtpE~~pe 297 (764)
T PRK12861 284 ILALANPTPEIFPE 297 (764)
T ss_pred EEECCCCCccCCHH
Confidence 88898884 45553
No 250
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.21 E-value=0.00092 Score=69.75 Aligned_cols=78 Identities=23% Similarity=0.341 Sum_probs=55.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH---------------------HHHHHHHHHhC----Ccceeec
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE---------------------ERVAAICEELN----GVEIIYK 298 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~---------------------~ra~~la~~~g----~~~~~~~ 298 (513)
+...+|+|+|+|++|..++.+|...|+.+|+++|.+. .|++..++.+. ...+...
T Consensus 22 L~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~ 101 (339)
T PRK07688 22 LREKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAI 101 (339)
T ss_pred hcCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence 5688999999999999999999999999999999862 23333333332 1111111
Q ss_pred ----ccchHHhhcCCCcEEEEcCCCCc
Q 010322 299 ----PLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 299 ----~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
..++..+.+.++|+||+||....
T Consensus 102 ~~~~~~~~~~~~~~~~DlVid~~Dn~~ 128 (339)
T PRK07688 102 VQDVTAEELEELVTGVDLIIDATDNFE 128 (339)
T ss_pred eccCCHHHHHHHHcCCCEEEEcCCCHH
Confidence 11244566889999999998764
No 251
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.20 E-value=0.0018 Score=65.59 Aligned_cols=92 Identities=20% Similarity=0.302 Sum_probs=68.0
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHh
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLS 305 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~ 305 (513)
++.+.+++.+. ++ .++.|++|+|||. .-+|+-++..|...|++ |+++.... .++.+
T Consensus 141 Tp~aii~lL~~-y~-i~l~Gk~vvViGrS~~VGkPla~lL~~~~AT-Vt~chs~T--------------------~dl~~ 197 (282)
T PRK14180 141 TPKGIMTMLRE-YG-IKTEGAYAVVVGASNVVGKPVSQLLLNAKAT-VTTCHRFT--------------------TDLKS 197 (282)
T ss_pred CHHHHHHHHHH-hC-CCCCCCEEEEECCCCcchHHHHHHHHHCCCE-EEEEcCCC--------------------CCHHH
Confidence 34445566554 22 4789999999999 67899999999999985 88886431 12334
Q ss_pred hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 306 CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
.++.||+||+|+|.|.. ++.++++. | .++||.++.+
T Consensus 198 ~~k~ADIvIsAvGkp~~-i~~~~vk~---------g-avVIDvGin~ 233 (282)
T PRK14180 198 HTTKADILIVAVGKPNF-ITADMVKE---------G-AVVIDVGINH 233 (282)
T ss_pred HhhhcCEEEEccCCcCc-CCHHHcCC---------C-cEEEEecccc
Confidence 45789999999999977 67777743 2 7899998654
No 252
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.20 E-value=0.0011 Score=67.60 Aligned_cols=74 Identities=19% Similarity=0.302 Sum_probs=51.8
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh-------------CCcc--------eeecccchHHh
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL-------------NGVE--------IIYKPLSEMLS 305 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~-------------g~~~--------~~~~~~~~~~~ 305 (513)
++|.|||+|.||..++..|...|. +|+++|+++++.+...+.+ +... ..+....+. +
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 81 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGY-DVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRTSTSY-E 81 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEeeCCH-H
Confidence 679999999999999999999998 5999999998775432211 1000 001112233 4
Q ss_pred hcCCCcEEEEcCCCCcc
Q 010322 306 CAADADVVFTSTASEAP 322 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~~ 322 (513)
.+.++|+||.|++....
T Consensus 82 ~~~~aDlVieav~e~~~ 98 (291)
T PRK06035 82 SLSDADFIVEAVPEKLD 98 (291)
T ss_pred HhCCCCEEEEcCcCcHH
Confidence 56899999999987653
No 253
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=97.19 E-value=0.0031 Score=63.07 Aligned_cols=153 Identities=12% Similarity=0.137 Sum_probs=91.9
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCcccccccc-ccCCCchHHHH
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETN-IAAGAVSVSSA 230 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~-i~~~~~Sva~~ 230 (513)
...|+|+++.+.+++++++..-+|+..+.-. ..+....+...--...++++..+..... ....+...+++
T Consensus 59 ~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~ 129 (323)
T cd05276 59 DILGLEVAGVVVAVGPGVTGWKVGDRVCALL---------AGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQ 129 (323)
T ss_pred CcccceeEEEEEeeCCCCCCCCCCCEEEEec---------CCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHH
Confidence 3579999999999999998888899876310 0122222211111233444443322221 11234445555
Q ss_pred HHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc-h----HH
Q 010322 231 AVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS-E----ML 304 (513)
Q Consensus 231 Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~-~----~~ 304 (513)
++.... ....+.+|+|.|+ |.+|..++..++..|+. |+++.++.++...+ ..++.. ..+.... + +.
T Consensus 130 ~~~~~~-----~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~-v~~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~~~~ 201 (323)
T cd05276 130 NLFQLG-----GLKAGETVLIHGGASGVGTAAIQLAKALGAR-VIATAGSEEKLEAC-RALGAD-VAINYRTEDFAEEVK 201 (323)
T ss_pred HHHHhc-----CCCCCCEEEEEcCcChHHHHHHHHHHHcCCE-EEEEcCCHHHHHHH-HHcCCC-EEEeCCchhHHHHHH
Confidence 543221 1346889999997 99999999999999986 88899988877444 556531 1111111 1 11
Q ss_pred hhc--CCCcEEEEcCCCCc
Q 010322 305 SCA--ADADVVFTSTASEA 321 (513)
Q Consensus 305 ~~l--~~aDVVI~AT~s~~ 321 (513)
... .++|++|++++...
T Consensus 202 ~~~~~~~~d~vi~~~g~~~ 220 (323)
T cd05276 202 EATGGRGVDVILDMVGGDY 220 (323)
T ss_pred HHhCCCCeEEEEECCchHH
Confidence 111 36899999998643
No 254
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.19 E-value=0.00082 Score=70.58 Aligned_cols=78 Identities=21% Similarity=0.332 Sum_probs=56.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-------------------HHHHHHHHHhCCc--ceeecc---
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-------------------ERVAAICEELNGV--EIIYKP--- 299 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-------------------~ra~~la~~~g~~--~~~~~~--- 299 (513)
+.+.+|+|+|+|++|..++++|...|+.+++++|.+. .|++..++.+... .+.+.+
T Consensus 26 L~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~ 105 (355)
T PRK05597 26 LFDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVR 105 (355)
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEe
Confidence 4678999999999999999999999999999988752 2554444444211 112221
Q ss_pred ---cchHHhhcCCCcEEEEcCCCCc
Q 010322 300 ---LSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 300 ---~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
.++..+.+.++|+||+||....
T Consensus 106 ~i~~~~~~~~~~~~DvVvd~~d~~~ 130 (355)
T PRK05597 106 RLTWSNALDELRDADVILDGSDNFD 130 (355)
T ss_pred ecCHHHHHHHHhCCCEEEECCCCHH
Confidence 1234456789999999997754
No 255
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=97.19 E-value=0.0034 Score=63.84 Aligned_cols=168 Identities=15% Similarity=0.163 Sum_probs=95.9
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCc--------cccccccccCC-
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGK--------RVRTETNIAAG- 223 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~Vr~et~i~~~- 223 (513)
..|||+++.+..+ |.+...+|+..+.... . .|...++.|.+++.++. .+..+......
T Consensus 60 ~~g~e~~G~V~~~--~~~~~~~Gd~V~~~~~--------~---~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~ 126 (326)
T cd08289 60 IPGIDLAGTVVES--NDPRFKPGDEVIVTSY--------D---LGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGT 126 (326)
T ss_pred CcccceeEEEEEc--CCCCCCCCCEEEEccc--------c---cCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhh
Confidence 4699999998774 5677788998875321 0 11112344444444433 22222221111
Q ss_pred CchHHHHHHHHHHhhCCCCCC-CCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc
Q 010322 224 AVSVSSAAVELALMKLPESSH-ATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS 301 (513)
Q Consensus 224 ~~Sva~~Av~la~~~~~~~~l-~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~ 301 (513)
+...++.++..... . ... .+.+|+|+|+ |.+|.++++.++..|++ |+++.+++++.+ ++.++|.. .+....
T Consensus 127 ~~~ta~~~l~~~~~-~--~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~-~~~~~g~~--~v~~~~ 199 (326)
T cd08289 127 AGFTAALSIHRLEE-N--GLTPEQGPVLVTGATGGVGSLAVSILAKLGYE-VVASTGKADAAD-YLKKLGAK--EVIPRE 199 (326)
T ss_pred HHHHHHHHHHHHHh-c--CCCCCCCEEEEEcCCchHHHHHHHHHHHCCCe-EEEEecCHHHHH-HHHHcCCC--EEEcch
Confidence 11122333322111 1 122 4679999999 99999999999999995 888999988874 44667642 122212
Q ss_pred h-----HHhh-cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 302 E-----MLSC-AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 302 ~-----~~~~-l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
+ +... -.++|+||+|++.. .+ ...+..+. .+|..+.++.
T Consensus 200 ~~~~~~~~~~~~~~~d~vld~~g~~-~~--~~~~~~l~-----~~G~~i~~g~ 244 (326)
T cd08289 200 ELQEESIKPLEKQRWAGAVDPVGGK-TL--AYLLSTLQ-----YGGSVAVSGL 244 (326)
T ss_pred hHHHHHHHhhccCCcCEEEECCcHH-HH--HHHHHHhh-----cCCEEEEEee
Confidence 1 1111 13689999999873 32 34454443 3566666654
No 256
>PLN02858 fructose-bisphosphate aldolase
Probab=97.18 E-value=0.00088 Score=81.38 Aligned_cols=72 Identities=14% Similarity=0.180 Sum_probs=59.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCccC
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPL 323 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~v 323 (513)
...+|.+||.|.||..++..|...|.. |+++||++++++.+++. |. . ..++..++...+|+||.|.+.+..+
T Consensus 3 ~~~~IGfIGLG~MG~~mA~~L~~~G~~-v~v~dr~~~~~~~l~~~-Ga---~--~~~s~~e~a~~advVi~~l~~~~~v 74 (1378)
T PLN02858 3 SAGVVGFVGLDSLSFELASSLLRSGFK-VQAFEISTPLMEKFCEL-GG---H--RCDSPAEAAKDAAALVVVLSHPDQV 74 (1378)
T ss_pred CCCeEEEEchhHHHHHHHHHHHHCCCe-EEEEcCCHHHHHHHHHc-CC---e--ecCCHHHHHhcCCEEEEEcCChHHH
Confidence 467899999999999999999999985 99999999999888764 42 1 2345666677899999999887654
No 257
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=97.18 E-value=0.0012 Score=67.93 Aligned_cols=178 Identities=16% Similarity=0.244 Sum_probs=101.9
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhch-------HH----HHHHHhHhcCcccchhhHHHHHHHhhCcc----cccc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQ-------VK----QVVKVGQGVVGFGRNISGLFKHAISVGKR----VRTE 217 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQ-------vk----~A~~~a~~~~~~g~~L~~lf~~ai~v~k~----Vr~e 217 (513)
..|+|+++.+.+|+++++..-+|+..+... .. .....|......|...++.+..++.++.. ++..
T Consensus 59 ~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~ 138 (341)
T cd08297 59 IGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDG 138 (341)
T ss_pred cCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCC
Confidence 469999999999999998888999887521 00 11222222222222223445544444431 1211
Q ss_pred ----cccc-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccH-HHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC
Q 010322 218 ----TNIA-AGAVSVSSAAVELALMKLPESSHATARMLVIGAGK-MGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN 291 (513)
Q Consensus 218 ----t~i~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~-mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g 291 (513)
.... ..+...++.++... ....+.+|+|.|+|+ +|.+++..++..|+ +|+++.+++++.+ ++..+|
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~~------~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~-~~~~~g 210 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKKA------GLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLE-LAKELG 210 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHhc------CCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHH-HHHHcC
Confidence 1110 11122233343221 134689999999965 99999999999998 5899999988875 446676
Q ss_pred Ccceeecccc--h----HHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 292 GVEIIYKPLS--E----MLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 292 ~~~~~~~~~~--~----~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
.. .+.... + +.... .+.|+|++|.+++..+ ...++.+. .+|..+.+.
T Consensus 211 ~~--~v~~~~~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~--~~~~~~l~-----~~g~~v~~g 265 (341)
T cd08297 211 AD--AFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAY--EQALDYLR-----PGGTLVCVG 265 (341)
T ss_pred Cc--EEEcCCCccHHHHHHHHhcCCCCCEEEEcCCchHHH--HHHHHHhh-----cCCEEEEec
Confidence 42 122211 1 22222 4689999987776543 33444432 245455554
No 258
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=97.17 E-value=0.0018 Score=67.56 Aligned_cols=74 Identities=22% Similarity=0.321 Sum_probs=54.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc--h----HHhhc--CCCcEEEE
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS--E----MLSCA--ADADVVFT 315 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~--~----~~~~l--~~aDVVI~ 315 (513)
..+.+|+|.|+|.+|.++++.++..|+..|+++..+.++. +++.+++.. .+.+.. + +.... .++|+||+
T Consensus 186 ~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~-~~~~~~g~~--~v~~~~~~~~~~~l~~~~~~~~~d~vld 262 (367)
T cd08263 186 RPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKL-AKAKELGAT--HTVNAAKEDAVAAIREITGGRGVDVVVE 262 (367)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHhCCc--eEecCCcccHHHHHHHHhCCCCCCEEEE
Confidence 4688999999999999999999999997788888888887 455667632 122211 1 22222 36899999
Q ss_pred cCCCC
Q 010322 316 STASE 320 (513)
Q Consensus 316 AT~s~ 320 (513)
|+++.
T Consensus 263 ~vg~~ 267 (367)
T cd08263 263 ALGKP 267 (367)
T ss_pred eCCCH
Confidence 99875
No 259
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.17 E-value=0.0013 Score=64.76 Aligned_cols=79 Identities=30% Similarity=0.363 Sum_probs=55.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCC-------------------HHHHHHHHHHhCC----cceeecc-
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRS-------------------EERVAAICEELNG----VEIIYKP- 299 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs-------------------~~ra~~la~~~g~----~~~~~~~- 299 (513)
+.+.+|+|+|+|++|..+++.|...|+.+++++|.+ ..|++.+++.+.. ..+...+
T Consensus 19 L~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~ 98 (228)
T cd00757 19 LKNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNE 98 (228)
T ss_pred HhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecc
Confidence 467899999999999999999999999999998643 1244444544421 1122111
Q ss_pred ---cchHHhhcCCCcEEEEcCCCCcc
Q 010322 300 ---LSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 300 ---~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
.++..+.+.++|+||+|+..+..
T Consensus 99 ~i~~~~~~~~~~~~DvVi~~~d~~~~ 124 (228)
T cd00757 99 RLDAENAEELIAGYDLVLDCTDNFAT 124 (228)
T ss_pred eeCHHHHHHHHhCCCEEEEcCCCHHH
Confidence 12344567889999999987643
No 260
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.15 E-value=0.0015 Score=64.81 Aligned_cols=79 Identities=20% Similarity=0.302 Sum_probs=55.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-------------------HHHHHHHHHhC----Ccceeecc-
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-------------------ERVAAICEELN----GVEIIYKP- 299 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-------------------~ra~~la~~~g----~~~~~~~~- 299 (513)
+.+.+|+|+|+|++|..++.+|...|+.+++++|.+. .|++.+++.+. ...+...+
T Consensus 22 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~ 101 (240)
T TIGR02355 22 LKASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINA 101 (240)
T ss_pred HhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 4678999999999999999999999999999988742 13333333332 11122111
Q ss_pred ---cchHHhhcCCCcEEEEcCCCCcc
Q 010322 300 ---LSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 300 ---~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
.++..+.+.++|+||+|+.++..
T Consensus 102 ~i~~~~~~~~~~~~DlVvd~~D~~~~ 127 (240)
T TIGR02355 102 KLDDAELAALIAEHDIVVDCTDNVEV 127 (240)
T ss_pred cCCHHHHHHHhhcCCEEEEcCCCHHH
Confidence 12355667899999999988653
No 261
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=97.15 E-value=0.0019 Score=66.63 Aligned_cols=165 Identities=13% Similarity=0.191 Sum_probs=93.5
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCc--------cccccccccC-C
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGK--------RVRTETNIAA-G 223 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~Vr~et~i~~-~ 223 (513)
..|+|+++.+..++++++..-+|+....-... ..+ +...++.|+.++.++. .+..+..... -
T Consensus 57 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~-------~~~--~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~ 127 (339)
T cd08249 57 ILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHG-------GNP--NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPV 127 (339)
T ss_pred eeeeeeeEEEEEeCCCcCcCCCCCEEEEEecc-------ccC--CCCCCCcccceEEechhheEECCCCCCHHHceecch
Confidence 46999999999999999888889987753210 000 1122445555554443 2222222111 1
Q ss_pred CchHHHHHHHHHHhhC-----CCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceee
Q 010322 224 AVSVSSAAVELALMKL-----PESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIY 297 (513)
Q Consensus 224 ~~Sva~~Av~la~~~~-----~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~ 297 (513)
+..+++.++....... ......+.+|+|.|+ |.+|.++++.++..|+. |+.+. +.++. ++++.+|.. ..+
T Consensus 128 ~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~-v~~~~-~~~~~-~~~~~~g~~-~v~ 203 (339)
T cd08249 128 GLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYK-VITTA-SPKNF-DLVKSLGAD-AVF 203 (339)
T ss_pred HHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCe-EEEEE-CcccH-HHHHhcCCC-EEE
Confidence 3334444432111000 001246899999997 89999999999999996 66655 44666 455777742 112
Q ss_pred ccc-chHHh----h-cCCCcEEEEcCCCCccCCChhhhhcC
Q 010322 298 KPL-SEMLS----C-AADADVVFTSTASEAPLFLKDHVQDL 332 (513)
Q Consensus 298 ~~~-~~~~~----~-l~~aDVVI~AT~s~~~vi~~~~l~~~ 332 (513)
... .+..+ . -.+.|+|+++++++..+ .+.++.+
T Consensus 204 ~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~~--~~~~~~l 242 (339)
T cd08249 204 DYHDPDVVEDIRAATGGKLRYALDCISTPESA--QLCAEAL 242 (339)
T ss_pred ECCCchHHHHHHHhcCCCeeEEEEeeccchHH--HHHHHHH
Confidence 111 11111 1 14689999999875443 3344443
No 262
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=97.14 E-value=0.0011 Score=68.31 Aligned_cols=69 Identities=17% Similarity=0.148 Sum_probs=50.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCC-HHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRS-EERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs-~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
+.|++|.|||+|.||.++++.|...|.. |++.++. .++...+. +.|. .+. +..+.+..+|+||.|++..
T Consensus 1 l~~kkIgiIG~G~mG~AiA~~L~~sG~~-Viv~~~~~~~~~~~a~-~~Gv---~~~---s~~ea~~~ADiVvLaVpp~ 70 (314)
T TIGR00465 1 LKGKTVAIIGYGSQGHAQALNLRDSGLN-VIVGLRKGGASWKKAT-EDGF---KVG---TVEEAIPQADLIMNLLPDE 70 (314)
T ss_pred CCcCEEEEEeEcHHHHHHHHHHHHCCCe-EEEEECcChhhHHHHH-HCCC---EEC---CHHHHHhcCCEEEEeCCcH
Confidence 3689999999999999999999999984 6665554 34443333 4442 222 2455678999999999965
No 263
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=97.13 E-value=0.0062 Score=60.83 Aligned_cols=170 Identities=14% Similarity=0.150 Sum_probs=95.8
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccC-CCchHHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAA-GAVSVSSAA 231 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~-~~~Sva~~A 231 (513)
..|+++++.+..+++++..+-+|+...... ..+..+.++..--...+.++..+..+..... .+...++.+
T Consensus 57 ~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 127 (320)
T cd05286 57 VLGVEGAGVVEAVGPGVTGFKVGDRVAYAG---------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYL 127 (320)
T ss_pred cCCcceeEEEEEECCCCCCCCCCCEEEEec---------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHH
Confidence 579999999999999888888898776421 1122222211111122333332222221111 111122222
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc-h----HHh
Q 010322 232 VELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS-E----MLS 305 (513)
Q Consensus 232 v~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~-~----~~~ 305 (513)
+.. .. ....|.+|+|.|+ |.+|.++++.+...|+. |+++.+++++.+. +.++|.. ..+...+ + +..
T Consensus 128 l~~---~~--~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~-~~~~g~~-~~~~~~~~~~~~~~~~ 199 (320)
T cd05286 128 LRE---TY--PVKPGDTVLVHAAAGGVGLLLTQWAKALGAT-VIGTVSSEEKAEL-ARAAGAD-HVINYRDEDFVERVRE 199 (320)
T ss_pred HHH---hc--CCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEcCCHHHHHH-HHHCCCC-EEEeCCchhHHHHHHH
Confidence 211 11 2346899999995 99999999999999985 8888888888744 4667642 1221111 1 222
Q ss_pred hc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 306 CA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 306 ~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
.. .+.|+|++|++.. .. ...++.+. .+|..+.++
T Consensus 200 ~~~~~~~d~vl~~~~~~-~~--~~~~~~l~-----~~g~~v~~g 235 (320)
T cd05286 200 ITGGRGVDVVYDGVGKD-TF--EGSLDSLR-----PRGTLVSFG 235 (320)
T ss_pred HcCCCCeeEEEECCCcH-hH--HHHHHhhc-----cCcEEEEEe
Confidence 22 3689999998863 22 23444432 345555554
No 264
>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed
Probab=97.12 E-value=0.0019 Score=73.52 Aligned_cols=139 Identities=17% Similarity=0.258 Sum_probs=92.2
Q ss_pred HHHHhhCcccccccccc------CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCC--eEEEE
Q 010322 205 KHAISVGKRVRTETNIA------AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCT--KMVVV 276 (513)
Q Consensus 205 ~~ai~v~k~Vr~et~i~------~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~--~V~v~ 276 (513)
.+++.+-++.+.+..|. +++..+..+++--+-+..+ .++.+.+|++.|+|..|..+++.|...|.+ +|+++
T Consensus 139 p~~f~i~~~~~~~~~ip~f~DD~~GTa~v~lA~l~na~~~~~-~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~~ 217 (752)
T PRK07232 139 PECFYIEEKLRERMDIPVFHDDQHGTAIISAAALLNALELVG-KKIEDVKIVVSGAGAAAIACLNLLVALGAKKENIIVC 217 (752)
T ss_pred chHHHHHHHHHHhcCCCeeccccchHHHHHHHHHHHHHHHhC-CChhhcEEEEECccHHHHHHHHHHHHcCCCcccEEEE
Confidence 34555555555443332 4566666666544444443 567899999999999999999999999994 89999
Q ss_pred eCC----HHH---HHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 277 NRS----EER---VAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 277 nRs----~~r---a~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
|+. .+| .......|.. . .+..++.++++++||+|-+++ + .+|++++++.+. .+++++-+|
T Consensus 218 D~~G~i~~~r~~~~~~~k~~~a~---~-~~~~~l~~~i~~~~v~iG~s~-~-g~~~~~~v~~M~-------~~piifals 284 (752)
T PRK07232 218 DSKGVIYKGRTEGMDEWKAAYAV---D-TDARTLAEAIEGADVFLGLSA-A-GVLTPEMVKSMA-------DNPIIFALA 284 (752)
T ss_pred cCCCeecCCCcccccHHHHHHhc---c-CCCCCHHHHHcCCCEEEEcCC-C-CCCCHHHHHHhc-------cCCEEEecC
Confidence 863 112 1122222211 1 123578888999999999876 4 578999998864 247888888
Q ss_pred CCC-CCCcc
Q 010322 350 VPR-NVGSC 357 (513)
Q Consensus 350 vPr-didp~ 357 (513)
.|- .++|+
T Consensus 285 NP~~E~~p~ 293 (752)
T PRK07232 285 NPDPEITPE 293 (752)
T ss_pred CCCccCCHH
Confidence 874 44443
No 265
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.12 E-value=0.0012 Score=65.71 Aligned_cols=78 Identities=26% Similarity=0.317 Sum_probs=54.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-------------------HHHHHHHHHhC----Ccceeecc-
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-------------------ERVAAICEELN----GVEIIYKP- 299 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-------------------~ra~~la~~~g----~~~~~~~~- 299 (513)
+..++|+|+|+|++|..++++|...|+.+++++|.+. .|++.+++.+. ...+...+
T Consensus 30 L~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~ 109 (245)
T PRK05690 30 LKAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINA 109 (245)
T ss_pred hcCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEec
Confidence 4689999999999999999999999999999987631 24433344332 11111111
Q ss_pred ---cchHHhhcCCCcEEEEcCCCCc
Q 010322 300 ---LSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 300 ---~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
.++..+.+.++|+||+|+.+..
T Consensus 110 ~i~~~~~~~~~~~~DiVi~~~D~~~ 134 (245)
T PRK05690 110 RLDDDELAALIAGHDLVLDCTDNVA 134 (245)
T ss_pred cCCHHHHHHHHhcCCEEEecCCCHH
Confidence 1234456789999999998764
No 266
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=97.11 E-value=0.0022 Score=66.89 Aligned_cols=181 Identities=15% Similarity=0.196 Sum_probs=102.5
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHH---HH-------HHhHhc------------------Ccc--cchhhH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQ---VV-------KVGQGV------------------VGF--GRNISG 202 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~---A~-------~~a~~~------------------~~~--g~~L~~ 202 (513)
..|+|+++.+..+++++..+.+|+..+.-.... .+ +.|... |.. +....+
T Consensus 56 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 135 (363)
T cd08279 56 VLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLG 135 (363)
T ss_pred cccccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCc
Confidence 469999999999999998899999887632100 00 001000 000 001135
Q ss_pred HHHHHHhhCcc----cccccc----ccC-CCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeE
Q 010322 203 LFKHAISVGKR----VRTETN----IAA-GAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKM 273 (513)
Q Consensus 203 lf~~ai~v~k~----Vr~et~----i~~-~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V 273 (513)
.|++++.++.. ++.... ... .+...++.++. ... .-..+.+|+|.|+|.+|.++++.++..|+..|
T Consensus 136 ~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~---~~~--~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~V 210 (363)
T cd08279 136 TFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVV---NTA--RVRPGDTVAVIGCGGVGLNAIQGARIAGASRI 210 (363)
T ss_pred cceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHH---hcc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCCcE
Confidence 56665555542 121111 110 11122222211 111 23468899999999999999999999999768
Q ss_pred EEEeCCHHHHHHHHHHhCCcceeecccc------hHHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEE
Q 010322 274 VVVNRSEERVAAICEELNGVEIIYKPLS------EMLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF 345 (513)
Q Consensus 274 ~v~nRs~~ra~~la~~~g~~~~~~~~~~------~~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~vi 345 (513)
+++.++.++. +++..+|.. .+.+.. .+.... .++|+++++++.+..+ ...+..+. .+|..+.
T Consensus 211 i~~~~~~~~~-~~~~~~g~~--~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~--~~~~~~l~-----~~G~~v~ 280 (363)
T cd08279 211 IAVDPVPEKL-ELARRFGAT--HTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATI--RQALAMTR-----KGGTAVV 280 (363)
T ss_pred EEEcCCHHHH-HHHHHhCCe--EEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHH--HHHHHHhh-----cCCeEEE
Confidence 8888888887 455677642 222211 122222 4689999999865433 23344332 3565655
Q ss_pred Eec
Q 010322 346 IDI 348 (513)
Q Consensus 346 iDl 348 (513)
++.
T Consensus 281 ~g~ 283 (363)
T cd08279 281 VGM 283 (363)
T ss_pred Eec
Confidence 553
No 267
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.11 E-value=0.00062 Score=58.54 Aligned_cols=69 Identities=26% Similarity=0.334 Sum_probs=47.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
++.|++|+|||+|++|..-++.|...|+ +|+|+.++.+ ..+ +. +.+. .....+.+.++|+||.||+.+.
T Consensus 4 ~l~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~~----~~~--~~--i~~~-~~~~~~~l~~~~lV~~at~d~~ 72 (103)
T PF13241_consen 4 DLKGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEIE----FSE--GL--IQLI-RREFEEDLDGADLVFAATDDPE 72 (103)
T ss_dssp --TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSEH----HHH--TS--CEEE-ESS-GGGCTTESEEEE-SS-HH
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCchh----hhh--hH--HHHH-hhhHHHHHhhheEEEecCCCHH
Confidence 5789999999999999999999999998 5999999861 111 21 2222 1233456889999999998864
No 268
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=97.10 E-value=0.0014 Score=69.28 Aligned_cols=78 Identities=23% Similarity=0.372 Sum_probs=56.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCC-------------------HHHHHHHHHHhC----Ccceeecc-
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRS-------------------EERVAAICEELN----GVEIIYKP- 299 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs-------------------~~ra~~la~~~g----~~~~~~~~- 299 (513)
+.+.+|+|+|+|++|..++.+|...|+.+|+++|.+ ..|++.+++.+. ...+...+
T Consensus 39 l~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~ 118 (370)
T PRK05600 39 LHNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRE 118 (370)
T ss_pred hcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeee
Confidence 468899999999999999999999999999998875 224544444442 11111111
Q ss_pred ---cchHHhhcCCCcEEEEcCCCCc
Q 010322 300 ---LSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 300 ---~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
.++..+.+.++|+||+||-...
T Consensus 119 ~i~~~~~~~~~~~~DlVid~~Dn~~ 143 (370)
T PRK05600 119 RLTAENAVELLNGVDLVLDGSDSFA 143 (370)
T ss_pred ecCHHHHHHHHhCCCEEEECCCCHH
Confidence 1234556789999999998754
No 269
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=97.10 E-value=0.0017 Score=56.58 Aligned_cols=88 Identities=20% Similarity=0.327 Sum_probs=62.4
Q ss_pred eEEEEcccHHHHHHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcC--CCcEEEEcCCCCccC
Q 010322 248 RMLVIGAGKMGKLVIKHLVAK--GCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAA--DADVVFTSTASEAPL 323 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~--G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~--~aDVVI~AT~s~~~v 323 (513)
+|+|||+|.+|+..+..+... +.+-+.++++++++++.+++.++. . .+.++.+.+. +.|+|+-||+.....
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~---~--~~~~~~~ll~~~~~D~V~I~tp~~~h~ 76 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGI---P--VYTDLEELLADEDVDAVIIATPPSSHA 76 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTS---E--EESSHHHHHHHTTESEEEEESSGGGHH
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhcc---c--chhHHHHHHHhhcCCEEEEecCCcchH
Confidence 689999999999999888876 344456899999999999888874 2 3344444443 799999999986542
Q ss_pred CChhhhhcCCchhhhcCCcEEEEec
Q 010322 324 FLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 324 i~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
+.+..+. ..|..++++=
T Consensus 77 ---~~~~~~l-----~~g~~v~~EK 93 (120)
T PF01408_consen 77 ---EIAKKAL-----EAGKHVLVEK 93 (120)
T ss_dssp ---HHHHHHH-----HTTSEEEEES
T ss_pred ---HHHHHHH-----HcCCEEEEEc
Confidence 2222222 1355788874
No 270
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.09 E-value=0.0025 Score=63.96 Aligned_cols=79 Identities=23% Similarity=0.378 Sum_probs=59.7
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc---ceeeccc--ch---HHh---h----
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV---EIIYKPL--SE---MLS---C---- 306 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~---~~~~~~~--~~---~~~---~---- 306 (513)
...+++++|.|| |+||..+++.|..+|.. ++++.|+.+|+.++++++... .+.+.+. .+ +.. .
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~-liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYN-LILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 457899999999 99999999999999985 999999999999999987531 1222222 22 111 1
Q ss_pred cCCCcEEEEcCCCCcc
Q 010322 307 AADADVVFTSTASEAP 322 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~ 322 (513)
....|++|++.|-+.+
T Consensus 82 ~~~IdvLVNNAG~g~~ 97 (265)
T COG0300 82 GGPIDVLVNNAGFGTF 97 (265)
T ss_pred CCcccEEEECCCcCCc
Confidence 1268999999887654
No 271
>PRK12862 malic enzyme; Reviewed
Probab=97.08 E-value=0.0037 Score=71.56 Aligned_cols=135 Identities=16% Similarity=0.231 Sum_probs=92.5
Q ss_pred HHHHHhhCcccccccccc------CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCC--eEEE
Q 010322 204 FKHAISVGKRVRTETNIA------AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCT--KMVV 275 (513)
Q Consensus 204 f~~ai~v~k~Vr~et~i~------~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~--~V~v 275 (513)
-.+++.+-++.+.+..|. +++.++..+++--+-+..+ .++.+.+|+|.|||..|..+++.|...|++ +|++
T Consensus 146 ~~~~f~i~~~~~~~~~ip~f~DD~~GTa~v~la~l~~a~~~~~-~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~ 224 (763)
T PRK12862 146 APECFYIERELRERMKIPVFHDDQHGTAIIVAAALLNGLKLVG-KDIEDVKLVASGAGAAALACLDLLVSLGVKRENIWV 224 (763)
T ss_pred CchHHHHHHHHHhcCCCceEecCcccHHHHHHHHHHHHHHHhC-CChhhcEEEEEChhHHHHHHHHHHHHcCCCcccEEE
Confidence 345565655555543332 4566666666544444443 567889999999999999999999999995 8999
Q ss_pred EeCC--------H---HHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEE
Q 010322 276 VNRS--------E---ERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL 344 (513)
Q Consensus 276 ~nRs--------~---~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~v 344 (513)
+|+. . .....+++.. ...++.++++++|++|-+++ + .+|++++++.+. .+.+
T Consensus 225 ~D~~G~i~~~r~~~l~~~~~~~a~~~--------~~~~l~e~~~~~~v~iG~s~-~-g~~~~~~v~~M~-------~~pi 287 (763)
T PRK12862 225 TDIKGVVYEGRTELMDPWKARYAQKT--------DARTLAEVIEGADVFLGLSA-A-GVLKPEMVKKMA-------PRPL 287 (763)
T ss_pred EcCCCeeeCCCCccccHHHHHHhhhc--------ccCCHHHHHcCCCEEEEcCC-C-CCCCHHHHHHhc-------cCCE
Confidence 9942 1 1112344431 22578888999999999887 4 578999998864 3477
Q ss_pred EEeccCCC-CCCc
Q 010322 345 FIDISVPR-NVGS 356 (513)
Q Consensus 345 iiDlavPr-didp 356 (513)
++-+|.|- .+.|
T Consensus 288 ifalsNP~~E~~p 300 (763)
T PRK12862 288 IFALANPTPEILP 300 (763)
T ss_pred EEeCCCCcccCCH
Confidence 88888874 3444
No 272
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=97.07 E-value=0.0038 Score=61.37 Aligned_cols=149 Identities=17% Similarity=0.220 Sum_probs=86.7
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccC-CCchHHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAA-GAVSVSSAA 231 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~-~~~Sva~~A 231 (513)
..|+|+++.+..+++++...-+|+..+.-. .|....+..---...+.++..+..+..... .+...++.+
T Consensus 26 ~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 95 (288)
T smart00829 26 VLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYA 95 (288)
T ss_pred CCCceeEEEEEeeCCCCcCCCCCCEEEEEc----------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHH
Confidence 569999999999999998888899876421 122222111111222333332222211111 122233333
Q ss_pred H-HHHHhhCCCCCCCCCeEEEEc-ccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc-ceeeccc-chH----
Q 010322 232 V-ELALMKLPESSHATARMLVIG-AGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV-EIIYKPL-SEM---- 303 (513)
Q Consensus 232 v-~la~~~~~~~~l~g~~VlVIG-aG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~-~~~~~~~-~~~---- 303 (513)
+ +.+ ....|.+|+|.| +|.+|.+++..++..|++ |+++.++.++.. ++..+|.. ...+... .+.
T Consensus 96 ~~~~~------~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~ 167 (288)
T smart00829 96 LVDLA------RLRPGESVLIHAAAGGVGQAAIQLAQHLGAE-VFATAGSPEKRD-FLRELGIPDDHIFSSRDLSFADEI 167 (288)
T ss_pred HHHHh------CCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHH-HHHHcCCChhheeeCCCccHHHHH
Confidence 2 111 234688999999 599999999999999995 888999888874 45667631 1111111 111
Q ss_pred Hhhc--CCCcEEEEcCCC
Q 010322 304 LSCA--ADADVVFTSTAS 319 (513)
Q Consensus 304 ~~~l--~~aDVVI~AT~s 319 (513)
.... .++|++|++++.
T Consensus 168 ~~~~~~~~~d~vi~~~~~ 185 (288)
T smart00829 168 LRATGGRGVDVVLNSLAG 185 (288)
T ss_pred HHHhCCCCcEEEEeCCCH
Confidence 1222 368999999884
No 273
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.07 E-value=0.00061 Score=63.63 Aligned_cols=68 Identities=28% Similarity=0.431 Sum_probs=51.6
Q ss_pred EEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceee---cccchHHhhcCCCcEEEEcCCCCc
Q 010322 249 MLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIY---KPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 249 VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~---~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
|+|+|+ |.+|+.+++.|...|. +|+++.|++++... .....+.. ...+.+.+++.++|+||.+.+.+.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~----~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED----SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH----CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc----ccccccceeeehhhhhhhhhhhhcchhhhhhhhhc
Confidence 789998 9999999999999996 69999999998755 22211111 222346677889999999997643
No 274
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=97.06 E-value=0.0022 Score=65.06 Aligned_cols=160 Identities=16% Similarity=0.196 Sum_probs=93.3
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhch----------HHHHHHHhHhcCcccchhhHHHHHHHhhCc--------cc
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQ----------VKQVVKVGQGVVGFGRNISGLFKHAISVGK--------RV 214 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQ----------vk~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~V 214 (513)
..|||+++.+.++++++..+-+|+...... .++.++.|...+..|...++.|+.++.++. .+
T Consensus 60 ~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~ 139 (342)
T cd08266 60 ILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNL 139 (342)
T ss_pred ecccceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCC
Confidence 479999999999999998888999887531 123344444433333323444444443332 21
Q ss_pred cccccccC-CCchHHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC
Q 010322 215 RTETNIAA-GAVSVSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG 292 (513)
Q Consensus 215 r~et~i~~-~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~ 292 (513)
..+..... -+...+++++. ... ....+.+++|.|+ |.+|.+++..+...|++ |+++.++.++... +..++.
T Consensus 140 ~~~~a~~~~~~~~~a~~~l~---~~~--~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~-~~~~~~ 212 (342)
T cd08266 140 SFEEAAAAPLTFLTAWHMLV---TRA--RLRPGETVLVHGAGSGVGSAAIQIAKLFGAT-VIATAGSEDKLER-AKELGA 212 (342)
T ss_pred CHHHHHhhhhHHHHHHHHHH---Hhc--CCCCCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHH-HHHcCC
Confidence 11111110 11223333321 111 2346889999999 48999999999999985 8889999888744 445543
Q ss_pred cceeecccc-h----HHhhc--CCCcEEEEcCCCC
Q 010322 293 VEIIYKPLS-E----MLSCA--ADADVVFTSTASE 320 (513)
Q Consensus 293 ~~~~~~~~~-~----~~~~l--~~aDVVI~AT~s~ 320 (513)
. ..+...+ + +.... .++|++|++.+..
T Consensus 213 ~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g~~ 246 (342)
T cd08266 213 D-YVIDYRKEDFVREVRELTGKRGVDVVVEHVGAA 246 (342)
T ss_pred C-eEEecCChHHHHHHHHHhCCCCCcEEEECCcHH
Confidence 1 1121111 1 11111 3689999998763
No 275
>PRK08223 hypothetical protein; Validated
Probab=97.06 E-value=0.0024 Score=64.86 Aligned_cols=77 Identities=16% Similarity=0.167 Sum_probs=54.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-------------------HHHHHHHHHhC----Ccceeec--
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-------------------ERVAAICEELN----GVEIIYK-- 298 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-------------------~ra~~la~~~g----~~~~~~~-- 298 (513)
+...+|+|+|+|++|..++.+|...|+.+|+++|.+. .|++..++.+. ...+...
T Consensus 25 L~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~ 104 (287)
T PRK08223 25 LRNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPE 104 (287)
T ss_pred HhcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence 4688999999999999999999999999999988641 13333333332 1112211
Q ss_pred --ccchHHhhcCCCcEEEEcCCCC
Q 010322 299 --PLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 299 --~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
..++..+.+.++|+||+|+...
T Consensus 105 ~l~~~n~~~ll~~~DlVvD~~D~~ 128 (287)
T PRK08223 105 GIGKENADAFLDGVDVYVDGLDFF 128 (287)
T ss_pred ccCccCHHHHHhCCCEEEECCCCC
Confidence 1234566788999999999763
No 276
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=97.06 E-value=0.0012 Score=70.61 Aligned_cols=73 Identities=19% Similarity=0.260 Sum_probs=54.4
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--------------cceeecccchHHhhcCCCcEE
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--------------VEIIYKPLSEMLSCAADADVV 313 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--------------~~~~~~~~~~~~~~l~~aDVV 313 (513)
+|.|||+|.||..++..|...|.. |+++|+++++.+.+...... ....+....+..+.+.++|+|
T Consensus 2 kI~vIGlG~~G~~lA~~La~~G~~-V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advv 80 (411)
T TIGR03026 2 KIAVIGLGYVGLPLAALLADLGHE-VTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVI 80 (411)
T ss_pred EEEEECCCchhHHHHHHHHhcCCe-EEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEE
Confidence 699999999999999999999984 99999999988776531100 000111224555667899999
Q ss_pred EEcCCCCc
Q 010322 314 FTSTASEA 321 (513)
Q Consensus 314 I~AT~s~~ 321 (513)
|.|++.+.
T Consensus 81 ii~vpt~~ 88 (411)
T TIGR03026 81 IICVPTPL 88 (411)
T ss_pred EEEeCCCC
Confidence 99999875
No 277
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.05 E-value=0.0026 Score=64.32 Aligned_cols=91 Identities=21% Similarity=0.291 Sum_probs=67.1
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEccc-HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhh
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGAG-KMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSC 306 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGaG-~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~ 306 (513)
+.+.+++.+.. + -++.|++|+|||.| -+|+-++..|...|+. |+++.... .++.+.
T Consensus 141 p~avi~lL~~~-~-i~l~Gk~vvViGrS~~VG~Pla~lL~~~~At-Vti~hs~T--------------------~~l~~~ 197 (281)
T PRK14183 141 PLGVMELLEEY-E-IDVKGKDVCVVGASNIVGKPMAALLLNANAT-VDICHIFT--------------------KDLKAH 197 (281)
T ss_pred HHHHHHHHHHc-C-CCCCCCEEEEECCCCcchHHHHHHHHHCCCE-EEEeCCCC--------------------cCHHHH
Confidence 44445665542 2 47899999999997 8999999999999985 88876421 123345
Q ss_pred cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 307 AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
++.||+||+|+|-|.. ++.++++. | .++||.++-+
T Consensus 198 ~~~ADIvV~AvGkp~~-i~~~~vk~---------g-avvIDvGin~ 232 (281)
T PRK14183 198 TKKADIVIVGVGKPNL-ITEDMVKE---------G-AIVIDIGINR 232 (281)
T ss_pred HhhCCEEEEecCcccc-cCHHHcCC---------C-cEEEEeeccc
Confidence 6789999999999876 57777743 2 7899998543
No 278
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.05 E-value=0.0023 Score=62.88 Aligned_cols=74 Identities=30% Similarity=0.535 Sum_probs=55.0
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-HhCCcceeeccc--chHHhh-cCCCcEEEEcCCCCc
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICE-ELNGVEIIYKPL--SEMLSC-AADADVVFTSTASEA 321 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~-~~g~~~~~~~~~--~~~~~~-l~~aDVVI~AT~s~~ 321 (513)
++++|+|+|.+|..+|+.|...|.. |++++++++++...+. ++....+..... +-+.++ +.++|++|.+|+...
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~g~~-Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~ 78 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEEGHN-VVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE 78 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCc-eEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH
Confidence 4799999999999999999999985 9999999999877444 443211111122 224444 679999999999964
No 279
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.04 E-value=0.0032 Score=56.56 Aligned_cols=76 Identities=32% Similarity=0.454 Sum_probs=52.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-------------------HHHHHHHHHhC----Ccceeecc--c
Q 010322 246 TARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-------------------ERVAAICEELN----GVEIIYKP--L 300 (513)
Q Consensus 246 g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-------------------~ra~~la~~~g----~~~~~~~~--~ 300 (513)
.++|+|+|+|.+|..++..|...|+.+++++|.+. .|++.+++.+. ...+...+ +
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 47899999999999999999999999999988741 14444444332 22222211 1
Q ss_pred --chHHhhcCCCcEEEEcCCCCc
Q 010322 301 --SEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 301 --~~~~~~l~~aDVVI~AT~s~~ 321 (513)
++..+.+.++|+||+|+.+..
T Consensus 82 ~~~~~~~~~~~~d~vi~~~d~~~ 104 (135)
T PF00899_consen 82 DEENIEELLKDYDIVIDCVDSLA 104 (135)
T ss_dssp SHHHHHHHHHTSSEEEEESSSHH
T ss_pred ccccccccccCCCEEEEecCCHH
Confidence 234455679999999988743
No 280
>PRK06545 prephenate dehydrogenase; Validated
Probab=97.04 E-value=0.0014 Score=68.93 Aligned_cols=71 Identities=17% Similarity=0.322 Sum_probs=50.9
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
++|+|||+|.||..++..|...|.. +.++++++... .++...+. ........+..+.+.++|+||.|++..
T Consensus 1 ~~I~iIG~GliG~siA~~L~~~G~~-v~i~~~~~~~~-~~~~a~~~-~~~~~~~~~~~~~~~~aDlVilavP~~ 71 (359)
T PRK06545 1 RTVLIVGLGLIGGSLALAIKAAGPD-VFIIGYDPSAA-QLARALGF-GVIDELAADLQRAAAEADLIVLAVPVD 71 (359)
T ss_pred CeEEEEEeCHHHHHHHHHHHhcCCC-eEEEEeCCCHH-HHHHHhcC-CCCcccccCHHHHhcCCCEEEEeCCHH
Confidence 4699999999999999999999974 78888876654 33333321 111112345566678999999999885
No 281
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=97.04 E-value=0.0018 Score=66.04 Aligned_cols=73 Identities=15% Similarity=0.303 Sum_probs=50.7
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH-----------HHHHhCCcc-------e-eecccchHHhhc
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAA-----------ICEELNGVE-------I-IYKPLSEMLSCA 307 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~-----------la~~~g~~~-------~-~~~~~~~~~~~l 307 (513)
++|.|||+|.||..++..|...|. +|+++|+++++++. +.+. +... . .....++. +.+
T Consensus 5 ~~V~vIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~-~~~ 81 (295)
T PLN02545 5 KKVGVVGAGQMGSGIAQLAAAAGM-DVWLLDSDPAALSRGLDSISSSLARLVKK-GKMSQEEADATLGRIRCTTNL-EEL 81 (295)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHc-CCCCHHHHHHHHhceEeeCCH-HHh
Confidence 679999999999999999999997 59999999887642 1111 1000 0 01111233 457
Q ss_pred CCCcEEEEcCCCCcc
Q 010322 308 ADADVVFTSTASEAP 322 (513)
Q Consensus 308 ~~aDVVI~AT~s~~~ 322 (513)
.+||+||+|.+....
T Consensus 82 ~~aD~Vieav~e~~~ 96 (295)
T PLN02545 82 RDADFIIEAIVESED 96 (295)
T ss_pred CCCCEEEEcCccCHH
Confidence 899999999886543
No 282
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.02 E-value=0.0011 Score=68.23 Aligned_cols=35 Identities=23% Similarity=0.374 Sum_probs=31.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE 280 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~ 280 (513)
.+++|.|||+|.||..+++.|...|. +|++++|+.
T Consensus 3 ~~m~I~iiG~G~~G~~lA~~l~~~G~-~V~~~~r~~ 37 (308)
T PRK14619 3 QPKTIAILGAGAWGSTLAGLASANGH-RVRVWSRRS 37 (308)
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCC-EEEEEeCCC
Confidence 45789999999999999999999997 599999975
No 283
>PRK08507 prephenate dehydrogenase; Validated
Probab=97.02 E-value=0.0022 Score=64.78 Aligned_cols=68 Identities=25% Similarity=0.288 Sum_probs=50.1
Q ss_pred eEEEEcccHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGC-TKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~-~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
+|.|||+|.||..++..|...|. .+|+++||++++.+.+ ...|.. . ...+..+.. .+|+||.|++...
T Consensus 2 ~I~iIG~G~mG~sla~~l~~~g~~~~v~~~d~~~~~~~~~-~~~g~~--~--~~~~~~~~~-~aD~Vilavp~~~ 70 (275)
T PRK08507 2 KIGIIGLGLMGGSLGLALKEKGLISKVYGYDHNELHLKKA-LELGLV--D--EIVSFEELK-KCDVIFLAIPVDA 70 (275)
T ss_pred EEEEEccCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHH-HHCCCC--c--ccCCHHHHh-cCCEEEEeCcHHH
Confidence 69999999999999999999886 3689999999887554 444421 1 112333333 5999999998764
No 284
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=97.02 E-value=0.0058 Score=59.95 Aligned_cols=151 Identities=19% Similarity=0.224 Sum_probs=85.3
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccC-CCchHHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAA-GAVSVSSAA 231 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~-~~~Sva~~A 231 (513)
..|+|+++.+..++++++.+-+|+....-. .+....+..---...+.++..+........ .+...++.+
T Consensus 30 ~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~----------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 99 (293)
T cd05195 30 PLGLECSGIVTRVGSGVTGLKVGDRVMGLA----------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYA 99 (293)
T ss_pred ccceeeeEEEEeecCCccCCCCCCEEEEEe----------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHH
Confidence 579999999999999988888899876421 111111111001122223332222211111 122233333
Q ss_pred HHHHHhhCCCCCCCCCeEEEEc-ccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC-cceeecccc-h----HH
Q 010322 232 VELALMKLPESSHATARMLVIG-AGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG-VEIIYKPLS-E----ML 304 (513)
Q Consensus 232 v~la~~~~~~~~l~g~~VlVIG-aG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~-~~~~~~~~~-~----~~ 304 (513)
+... . ....|.+|+|+| +|.+|..+++.++..|++ |+++.++.++...+ ...++ ....+...+ + +.
T Consensus 100 ~~~~---~--~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 172 (293)
T cd05195 100 LVDL---A--RLQKGESVLIHAAAGGVGQAAIQLAQHLGAE-VFATVGSEEKREFL-RELGGPVDHIFSSRDLSFADGIL 172 (293)
T ss_pred HHHH---h--ccCCCCEEEEecCCCHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHH-HHhCCCcceEeecCchhHHHHHH
Confidence 2111 1 234789999997 599999999999999985 88888887776444 44442 111111111 1 11
Q ss_pred hhc--CCCcEEEEcCCCC
Q 010322 305 SCA--ADADVVFTSTASE 320 (513)
Q Consensus 305 ~~l--~~aDVVI~AT~s~ 320 (513)
... .++|++|+|++.+
T Consensus 173 ~~~~~~~~d~vi~~~~~~ 190 (293)
T cd05195 173 RATGGRGVDVVLNSLSGE 190 (293)
T ss_pred HHhCCCCceEEEeCCCch
Confidence 222 3699999999976
No 285
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=97.00 E-value=0.006 Score=62.24 Aligned_cols=171 Identities=13% Similarity=0.118 Sum_probs=94.2
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCcccccccccc-CCCchHHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIA-AGAVSVSSAA 231 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~-~~~~Sva~~A 231 (513)
..|+|+++.+..++++++...+|++.+...- ..+....+...--...+.++..+..+.... ..+...++.+
T Consensus 60 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~--------~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~ 131 (327)
T PRK10754 60 GLGTEAAGVVSKVGSGVKHIKVGDRVVYAQS--------ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYL 131 (327)
T ss_pred ccCcceEEEEEEeCCCCCCCCCCCEEEECCC--------CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 4699999999999999998889998874210 011111111110112222333222211110 0011112222
Q ss_pred HHHHHhhCCCCCCCCCeEEEEc-ccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc-h----HHh
Q 010322 232 VELALMKLPESSHATARMLVIG-AGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS-E----MLS 305 (513)
Q Consensus 232 v~la~~~~~~~~l~g~~VlVIG-aG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~-~----~~~ 305 (513)
+. . .. ....|.+|+|.| +|.+|.++++.++..|++ |+.+.++.++. .+++++|.. ..+...+ + +..
T Consensus 132 l~---~-~~-~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~-v~~~~~~~~~~-~~~~~~g~~-~~~~~~~~~~~~~~~~ 203 (327)
T PRK10754 132 LR---K-TY-EIKPDEQFLFHAAAGGVGLIACQWAKALGAK-LIGTVGSAQKA-QRAKKAGAW-QVINYREENIVERVKE 203 (327)
T ss_pred HH---h-hc-CCCCCCEEEEEeCCcHHHHHHHHHHHHcCCE-EEEEeCCHHHH-HHHHHCCCC-EEEcCCCCcHHHHHHH
Confidence 11 1 11 124689999996 599999999999999996 77788888887 455677642 1221111 1 122
Q ss_pred hc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 306 CA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 306 ~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
.. .+.|++|+|++.. .. .+.+..+. .+|..+.++
T Consensus 204 ~~~~~~~d~vl~~~~~~-~~--~~~~~~l~-----~~g~~v~~g 239 (327)
T PRK10754 204 ITGGKKVRVVYDSVGKD-TW--EASLDCLQ-----RRGLMVSFG 239 (327)
T ss_pred HcCCCCeEEEEECCcHH-HH--HHHHHHhc-----cCCEEEEEc
Confidence 22 3689999999863 22 23444432 356555554
No 286
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.00 E-value=0.0033 Score=63.66 Aligned_cols=92 Identities=16% Similarity=0.286 Sum_probs=67.0
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHh
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLS 305 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~ 305 (513)
++.+.+++.+. ++ .++.|++|+|||- .-+|+-++..|...|++ |+++...- .++.+
T Consensus 139 Tp~avi~lL~~-~~-i~l~Gk~vvViGrS~iVGkPla~lL~~~~at-Vtichs~T--------------------~~l~~ 195 (282)
T PRK14169 139 TPYGIMALLDA-YD-IDVAGKRVVIVGRSNIVGRPLAGLMVNHDAT-VTIAHSKT--------------------RNLKQ 195 (282)
T ss_pred CHHHHHHHHHH-hC-CCCCCCEEEEECCCccchHHHHHHHHHCCCE-EEEECCCC--------------------CCHHH
Confidence 34444566544 22 4689999999999 67899999999999985 88885321 12334
Q ss_pred hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 306 CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
.+..|||||+|+|.|.. ++.++++. | .++||.++-+
T Consensus 196 ~~~~ADIvI~AvG~p~~-i~~~~vk~---------G-avVIDvGin~ 231 (282)
T PRK14169 196 LTKEADILVVAVGVPHF-IGADAVKP---------G-AVVIDVGISR 231 (282)
T ss_pred HHhhCCEEEEccCCcCc-cCHHHcCC---------C-cEEEEeeccc
Confidence 45789999999999976 67777743 3 6899998644
No 287
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=97.00 E-value=0.0047 Score=62.27 Aligned_cols=79 Identities=18% Similarity=0.284 Sum_probs=54.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCC-------------------HHHHHHHHHHhCCc--ceeecc---
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRS-------------------EERVAAICEELNGV--EIIYKP--- 299 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs-------------------~~ra~~la~~~g~~--~~~~~~--- 299 (513)
+.+.+|+|+|+|++|..++.+|...|+.+|+++|.+ ..|++.+++.+... .+.+..
T Consensus 28 L~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~ 107 (268)
T PRK15116 28 FADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDD 107 (268)
T ss_pred hcCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEec
Confidence 578899999999999999999999999999998864 12344444444211 111211
Q ss_pred ---cchHHhhc-CCCcEEEEcCCCCcc
Q 010322 300 ---LSEMLSCA-ADADVVFTSTASEAP 322 (513)
Q Consensus 300 ---~~~~~~~l-~~aDVVI~AT~s~~~ 322 (513)
.++..+.+ .++|+||+|+....+
T Consensus 108 ~i~~e~~~~ll~~~~D~VIdaiD~~~~ 134 (268)
T PRK15116 108 FITPDNVAEYMSAGFSYVIDAIDSVRP 134 (268)
T ss_pred ccChhhHHHHhcCCCCEEEEcCCCHHH
Confidence 12334444 379999999987544
No 288
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.00 E-value=0.0035 Score=63.62 Aligned_cols=92 Identities=17% Similarity=0.302 Sum_probs=68.1
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHh
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLS 305 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~ 305 (513)
++.+.+++.+. ++ .++.|++|+|||. +-+|+-++..|...|++ |+++.... .++.+
T Consensus 138 Tp~avi~lL~~-~~-i~l~Gk~vvViGrS~iVGkPla~lL~~~~aT-Vtichs~T--------------------~~l~~ 194 (287)
T PRK14173 138 TPAGVVRLLKH-YG-IPLAGKEVVVVGRSNIVGKPLAALLLREDAT-VTLAHSKT--------------------QDLPA 194 (287)
T ss_pred CHHHHHHHHHH-cC-CCCCCCEEEEECCCCccHHHHHHHHHHCCCE-EEEeCCCC--------------------CCHHH
Confidence 34444566554 32 4689999999999 77899999999999985 88876431 12344
Q ss_pred hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 306 CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
.+..||+||+|+|.|.. ++.++++. | .++||.++.+
T Consensus 195 ~~~~ADIvIsAvGkp~~-i~~~~vk~---------G-avVIDVGin~ 230 (287)
T PRK14173 195 VTRRADVLVVAVGRPHL-ITPEMVRP---------G-AVVVDVGINR 230 (287)
T ss_pred HHhhCCEEEEecCCcCc-cCHHHcCC---------C-CEEEEccCcc
Confidence 56789999999999965 57787743 3 6899998765
No 289
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.99 E-value=0.0035 Score=63.54 Aligned_cols=91 Identities=15% Similarity=0.200 Sum_probs=67.8
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHh
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLS 305 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~ 305 (513)
++.+.+++.+.. + .++.|++|+|||. .-+|+-++..|...|+. |++++..- .++.+
T Consensus 142 Tp~avi~ll~~y-~-i~l~Gk~vvViGrS~iVGkPla~lL~~~~at-Vt~chs~T--------------------~~l~~ 198 (284)
T PRK14177 142 TPYGMVLLLKEY-G-IDVTGKNAVVVGRSPILGKPMAMLLTEMNAT-VTLCHSKT--------------------QNLPS 198 (284)
T ss_pred CHHHHHHHHHHh-C-CCCCCCEEEEECCCCcchHHHHHHHHHCCCE-EEEeCCCC--------------------CCHHH
Confidence 344455665543 2 4789999999999 77899999999999985 88887421 12344
Q ss_pred hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCC
Q 010322 306 CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVP 351 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavP 351 (513)
..+.||+||+|+|.+.. ++.++++. | .++||.++-
T Consensus 199 ~~~~ADIvIsAvGk~~~-i~~~~ik~---------g-avVIDvGin 233 (284)
T PRK14177 199 IVRQADIIVGAVGKPEF-IKADWISE---------G-AVLLDAGYN 233 (284)
T ss_pred HHhhCCEEEEeCCCcCc-cCHHHcCC---------C-CEEEEecCc
Confidence 56789999999999976 57777743 2 689999864
No 290
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.98 E-value=0.0025 Score=70.40 Aligned_cols=77 Identities=19% Similarity=0.321 Sum_probs=57.0
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC--------C-----cc---eeecccchHHh
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN--------G-----VE---IIYKPLSEMLS 305 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g--------~-----~~---~~~~~~~~~~~ 305 (513)
...|++|+|.|+ |.+|+.+++.|...|+ +|+++.|+.+++..+...+. . .. ..+...+++.+
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~ 155 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP 155 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence 357899999998 9999999999999998 49999999988876655321 0 01 11122234556
Q ss_pred hcCCCcEEEEcCCCC
Q 010322 306 CAADADVVFTSTASE 320 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~ 320 (513)
.+.++|+||++.|..
T Consensus 156 aLggiDiVVn~AG~~ 170 (576)
T PLN03209 156 ALGNASVVICCIGAS 170 (576)
T ss_pred HhcCCCEEEEccccc
Confidence 678999999998764
No 291
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.98 E-value=0.0023 Score=68.93 Aligned_cols=76 Identities=22% Similarity=0.268 Sum_probs=51.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-HHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-ERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
+.+++|+|+|+|.+|..++..|...|+. |++++++. +......+++....+.+...+...+...++|+||.+++.+
T Consensus 3 ~~~k~v~iiG~g~~G~~~A~~l~~~G~~-V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 3 LKGKKVLVVGAGVSGLALAKFLKKLGAK-VILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGVP 79 (450)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCCC
Confidence 5789999999999999999999999984 99999975 3332322332211122222222223456799999998864
No 292
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.96 E-value=0.0038 Score=63.08 Aligned_cols=92 Identities=17% Similarity=0.307 Sum_probs=67.7
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHh
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLS 305 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~ 305 (513)
++.+.+++.+. ++ -++.|++|+|||- +-+|+-++..|...|++ |+++...- .++.+
T Consensus 141 Tp~av~~lL~~-~~-i~l~Gk~vvViGrS~~VGkPla~lL~~~~At-Vt~chs~T--------------------~~l~~ 197 (278)
T PRK14172 141 TPNSVITLIKS-LN-IDIEGKEVVVIGRSNIVGKPVAQLLLNENAT-VTICHSKT--------------------KNLKE 197 (278)
T ss_pred CHHHHHHHHHH-hC-CCCCCCEEEEECCCccchHHHHHHHHHCCCE-EEEeCCCC--------------------CCHHH
Confidence 34444566554 22 4689999999999 77899999999999985 88887421 12344
Q ss_pred hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 306 CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
....||+||+|+|.|.. ++.++++. | .++||.++-+
T Consensus 198 ~~~~ADIvIsAvGkp~~-i~~~~ik~---------g-avVIDvGin~ 233 (278)
T PRK14172 198 VCKKADILVVAIGRPKF-IDEEYVKE---------G-AIVIDVGTSS 233 (278)
T ss_pred HHhhCCEEEEcCCCcCc-cCHHHcCC---------C-cEEEEeeccc
Confidence 55789999999999976 67777743 3 7899987543
No 293
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.95 E-value=0.0041 Score=63.00 Aligned_cols=91 Identities=23% Similarity=0.366 Sum_probs=67.5
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhh
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSC 306 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~ 306 (513)
+.+.+++.+. ++ -++.|++|+|||. .-+|+-++..|...|++ |+++.... .++.+.
T Consensus 141 p~avi~lL~~-~~-i~l~Gk~vvVvGrS~iVGkPla~lL~~~~at-Vtichs~T--------------------~~l~~~ 197 (284)
T PRK14170 141 PAGIIELIKS-TG-TQIEGKRAVVIGRSNIVGKPVAQLLLNENAT-VTIAHSRT--------------------KDLPQV 197 (284)
T ss_pred HHHHHHHHHH-hC-CCCCCCEEEEECCCCcchHHHHHHHHHCCCE-EEEeCCCC--------------------CCHHHH
Confidence 4444566543 32 4789999999999 66899999999999985 88875421 134455
Q ss_pred cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 307 AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
+..|||||+|+|.+.. ++.++++. | .++||.++.+
T Consensus 198 ~~~ADIvI~AvG~~~~-i~~~~vk~---------G-avVIDvGin~ 232 (284)
T PRK14170 198 AKEADILVVATGLAKF-VKKDYIKP---------G-AIVIDVGMDR 232 (284)
T ss_pred HhhCCEEEEecCCcCc-cCHHHcCC---------C-CEEEEccCcc
Confidence 6789999999999986 67777743 3 6899998654
No 294
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=96.95 E-value=0.0027 Score=65.78 Aligned_cols=76 Identities=16% Similarity=0.189 Sum_probs=53.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----Hh--CCcceeecccchHHhhcCCCcEEEEcCC
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICE----EL--NGVEIIYKPLSEMLSCAADADVVFTSTA 318 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~----~~--g~~~~~~~~~~~~~~~l~~aDVVI~AT~ 318 (513)
..++|.|||+|.||..++..+...|..+|.++|++++++...+. .. .+....+....+. +.+.+||+||.+.+
T Consensus 5 ~~~KI~IIGaG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~~aDiVI~tag 83 (321)
T PTZ00082 5 KRRKISLIGSGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY-EDIAGSDVVIVTAG 83 (321)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH-HHhCCCCEEEECCC
Confidence 45789999999999999999998897569999998875432221 11 1111233333454 46799999999987
Q ss_pred CCc
Q 010322 319 SEA 321 (513)
Q Consensus 319 s~~ 321 (513)
.+.
T Consensus 84 ~~~ 86 (321)
T PTZ00082 84 LTK 86 (321)
T ss_pred CCC
Confidence 753
No 295
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=96.95 E-value=0.0086 Score=60.27 Aligned_cols=173 Identities=17% Similarity=0.181 Sum_probs=95.0
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhH-hcCcccchhhHHHHHHHhhCccccccccc-cCCCchHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQ-GVVGFGRNISGLFKHAISVGKRVRTETNI-AAGAVSVSSA 230 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~-~~~~~g~~L~~lf~~ai~v~k~Vr~et~i-~~~~~Sva~~ 230 (513)
..|+|+++.+.+|+. +..-+|+..+.-.- ..+. ..|....+...-....+++++.+..+... ...+...++.
T Consensus 59 ~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~----~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 132 (320)
T cd08243 59 VLGIEAVGEVEEAPG--GTFTPGQRVATAMG----GMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWG 132 (320)
T ss_pred cccceeEEEEEEecC--CCCCCCCEEEEecC----CCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHH
Confidence 469999999999984 45677887764210 0000 00111111111111233333333322211 1123344454
Q ss_pred HHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccch----HHh
Q 010322 231 AVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSE----MLS 305 (513)
Q Consensus 231 Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~----~~~ 305 (513)
++.... ....|.+|+|.|+ |.+|.++++.++..|++ |+.+.+++++. +++.++|... .+....+ +..
T Consensus 133 ~l~~~~-----~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~-~~~~~~g~~~-~~~~~~~~~~~i~~ 204 (320)
T cd08243 133 SLFRSL-----GLQPGDTLLIRGGTSSVGLAALKLAKALGAT-VTATTRSPERA-ALLKELGADE-VVIDDGAIAEQLRA 204 (320)
T ss_pred HHHHhc-----CCCCCCEEEEEcCCChHHHHHHHHHHHcCCE-EEEEeCCHHHH-HHHHhcCCcE-EEecCccHHHHHHH
Confidence 433211 2346899999998 99999999999999986 88888888887 4456676421 1111112 111
Q ss_pred hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 306 CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
.-.++|++++|++.. .+ .+.++.+. ++|..+.++
T Consensus 205 ~~~~~d~vl~~~~~~-~~--~~~~~~l~-----~~g~~v~~g 238 (320)
T cd08243 205 APGGFDKVLELVGTA-TL--KDSLRHLR-----PGGIVCMTG 238 (320)
T ss_pred hCCCceEEEECCChH-HH--HHHHHHhc-----cCCEEEEEc
Confidence 124799999999863 22 33444433 346555554
No 296
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=96.94 E-value=0.0045 Score=62.77 Aligned_cols=167 Identities=17% Similarity=0.169 Sum_probs=93.7
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCc--------cccccccccCC-
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGK--------RVRTETNIAAG- 223 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~Vr~et~i~~~- 223 (513)
..|||+++.+.++ |.+...+|+..+.... ..|...++.|.+++.++. .+..+......
T Consensus 60 ~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~-----------~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~ 126 (325)
T cd05280 60 TPGIDAAGTVVSS--DDPRFREGDEVLVTGY-----------DLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGT 126 (325)
T ss_pred ccCcccEEEEEEe--CCCCCCCCCEEEEccc-----------ccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHH
Confidence 4699999999888 6777888998876321 011111333444443333 22222111100
Q ss_pred CchHHHHHHHHHHhhCCCCCC-CCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc
Q 010322 224 AVSVSSAAVELALMKLPESSH-ATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS 301 (513)
Q Consensus 224 ~~Sva~~Av~la~~~~~~~~l-~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~ 301 (513)
....++.++..... . +.. .+.+|+|.|+ |.+|.++++.++..|+. |+++.++.++.+ ++.++|.. .+....
T Consensus 127 ~~~ta~~~l~~~~~-~--~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~-~~~~~g~~--~~~~~~ 199 (325)
T cd05280 127 AGFTAALSVHRLED-N--GQTPEDGPVLVTGATGGVGSIAVAILAKLGYT-VVALTGKEEQAD-YLKSLGAS--EVLDRE 199 (325)
T ss_pred HHHHHHHHHHHHhh-c--cCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHH-HHHhcCCc--EEEcch
Confidence 11122333221111 1 112 3468999998 99999999999999996 999999988874 44667742 122222
Q ss_pred h----HHhhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 302 E----MLSCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 302 ~----~~~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
+ ....+ .++|+||++++.+ .+ .+.++.+. .+|..+.++
T Consensus 200 ~~~~~~~~~~~~~~~d~vi~~~~~~-~~--~~~~~~l~-----~~g~~v~~g 243 (325)
T cd05280 200 DLLDESKKPLLKARWAGAIDTVGGD-VL--ANLLKQTK-----YGGVVASCG 243 (325)
T ss_pred hHHHHHHHHhcCCCccEEEECCchH-HH--HHHHHhhc-----CCCEEEEEe
Confidence 1 11111 3689999998874 22 34455443 345555454
No 297
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.92 E-value=0.0034 Score=56.83 Aligned_cols=74 Identities=22% Similarity=0.425 Sum_probs=50.5
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-------------------HHHHHHHHHhC----Ccceeecc--c--
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-------------------ERVAAICEELN----GVEIIYKP--L-- 300 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-------------------~ra~~la~~~g----~~~~~~~~--~-- 300 (513)
+|+|+|+|.+|..+++.|...|+.+++++|.+. .|++.+++.+. ...+...+ .
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~ 80 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE 80 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence 589999999999999999999999999998641 24444444432 11111111 1
Q ss_pred chHHhhcCCCcEEEEcCCCCc
Q 010322 301 SEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 301 ~~~~~~l~~aDVVI~AT~s~~ 321 (513)
.+..+.+.++|+||+|+.+..
T Consensus 81 ~~~~~~~~~~diVi~~~d~~~ 101 (143)
T cd01483 81 DNLDDFLDGVDLVIDAIDNIA 101 (143)
T ss_pred hhHHHHhcCCCEEEECCCCHH
Confidence 112355789999999998843
No 298
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.92 E-value=0.004 Score=63.10 Aligned_cols=91 Identities=18% Similarity=0.319 Sum_probs=67.1
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhh
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSC 306 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~ 306 (513)
+.+.+++.+. ++ .++.|++|+|||- .-+|+-++..|...|++ |+++...- .++.+.
T Consensus 141 p~avi~lL~~-y~-i~l~Gk~vvVvGrS~iVGkPla~lL~~~~at-Vt~chs~T--------------------~nl~~~ 197 (282)
T PRK14166 141 PLGVMKLLKA-YE-IDLEGKDAVIIGASNIVGRPMATMLLNAGAT-VSVCHIKT--------------------KDLSLY 197 (282)
T ss_pred HHHHHHHHHH-hC-CCCCCCEEEEECCCCcchHHHHHHHHHCCCE-EEEeCCCC--------------------CCHHHH
Confidence 4444566554 22 4689999999999 67899999999988885 88877531 123445
Q ss_pred cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 307 AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
...||+||+|+|.|.. ++.++++. | .++||.++-+
T Consensus 198 ~~~ADIvIsAvGkp~~-i~~~~vk~---------G-avVIDvGin~ 232 (282)
T PRK14166 198 TRQADLIIVAAGCVNL-LRSDMVKE---------G-VIVVDVGINR 232 (282)
T ss_pred HhhCCEEEEcCCCcCc-cCHHHcCC---------C-CEEEEecccc
Confidence 5789999999999976 57777743 2 7899998644
No 299
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.91 E-value=0.0045 Score=61.14 Aligned_cols=79 Identities=19% Similarity=0.306 Sum_probs=53.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-------------------HHHHHHHHHhCCc--ceeeccc--
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-------------------ERVAAICEELNGV--EIIYKPL-- 300 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-------------------~ra~~la~~~g~~--~~~~~~~-- 300 (513)
+.+.+|+|+|+|++|..++..|...|+.+++++|.+. .|++.+++.+... .+.+...
T Consensus 9 L~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~ 88 (231)
T cd00755 9 LRNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE 88 (231)
T ss_pred HhCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee
Confidence 4678999999999999999999999999999988641 2444444444211 1111111
Q ss_pred ----chHHhhc-CCCcEEEEcCCCCcc
Q 010322 301 ----SEMLSCA-ADADVVFTSTASEAP 322 (513)
Q Consensus 301 ----~~~~~~l-~~aDVVI~AT~s~~~ 322 (513)
++..+.+ .++|+||+|+.+...
T Consensus 89 ~i~~~~~~~l~~~~~D~VvdaiD~~~~ 115 (231)
T cd00755 89 FLTPDNSEDLLGGDPDFVVDAIDSIRA 115 (231)
T ss_pred ecCHhHHHHHhcCCCCEEEEcCCCHHH
Confidence 2333444 369999999887654
No 300
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=96.91 E-value=0.0083 Score=60.98 Aligned_cols=150 Identities=12% Similarity=0.169 Sum_probs=86.3
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCcccccccccc-CCCchHHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIA-AGAVSVSSAA 231 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~-~~~~Sva~~A 231 (513)
..|+|+++.+.+|+++++...+|+..+.-- ..|....+...--...+.+++.+..+.... ..+...++.+
T Consensus 61 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~---------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~ 131 (334)
T PTZ00354 61 ILGLEVAGYVEDVGSDVKRFKEGDRVMALL---------PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQL 131 (334)
T ss_pred ccceeeEEEEEEeCCCCCCCCCCCEEEEec---------CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 479999999999999998888999875310 012222211110112233333222211111 1122233333
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc------hHH
Q 010322 232 VELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS------EML 304 (513)
Q Consensus 232 v~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~------~~~ 304 (513)
+... . ....|.+|+|.|+ |.+|.++++.++..|+. ++++.+++++.+. +..+|. ...+.... .+.
T Consensus 132 l~~~----~-~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~-~~~~g~-~~~~~~~~~~~~~~~~~ 203 (334)
T PTZ00354 132 LKKH----G-DVKKGQSVLIHAGASGVGTAAAQLAEKYGAA-TIITTSSEEKVDF-CKKLAA-IILIRYPDEEGFAPKVK 203 (334)
T ss_pred HHHh----c-CCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHH-HHHcCC-cEEEecCChhHHHHHHH
Confidence 2211 1 1236889999995 99999999999999986 6678888888744 466764 21221111 111
Q ss_pred hhc--CCCcEEEEcCCC
Q 010322 305 SCA--ADADVVFTSTAS 319 (513)
Q Consensus 305 ~~l--~~aDVVI~AT~s 319 (513)
... .++|++|++++.
T Consensus 204 ~~~~~~~~d~~i~~~~~ 220 (334)
T PTZ00354 204 KLTGEKGVNLVLDCVGG 220 (334)
T ss_pred HHhCCCCceEEEECCch
Confidence 222 368999999875
No 301
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=96.91 E-value=0.0026 Score=65.76 Aligned_cols=76 Identities=18% Similarity=0.318 Sum_probs=57.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhCCc-----ceeecccchHHhhcCCCcEEEEcC
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGC-TKMVVVNRSEERVAAICEELNGV-----EIIYKPLSEMLSCAADADVVFTST 317 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~-~~V~v~nRs~~ra~~la~~~g~~-----~~~~~~~~~~~~~l~~aDVVI~AT 317 (513)
..+.+|.|||+|.+|..++..|...|. .++.++|++.+++...+..+... ...+. .+..+.+++||+||.+.
T Consensus 4 ~~~~ki~iiGaG~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~--~~~~~~~~~adivIita 81 (315)
T PRK00066 4 KQHNKVVLVGDGAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY--AGDYSDCKDADLVVITA 81 (315)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE--eCCHHHhCCCCEEEEec
Confidence 467899999999999999999998887 47999999988776666655421 11111 22345578999999998
Q ss_pred CCCc
Q 010322 318 ASEA 321 (513)
Q Consensus 318 ~s~~ 321 (513)
+.|.
T Consensus 82 g~~~ 85 (315)
T PRK00066 82 GAPQ 85 (315)
T ss_pred CCCC
Confidence 8753
No 302
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=96.89 E-value=0.0025 Score=70.12 Aligned_cols=76 Identities=24% Similarity=0.329 Sum_probs=53.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----------HhCCcc--------eeecccchHHhhc
Q 010322 246 TARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICE----------ELNGVE--------IIYKPLSEMLSCA 307 (513)
Q Consensus 246 g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~----------~~g~~~--------~~~~~~~~~~~~l 307 (513)
-++|.|||+|.||..++..|...|.. |+++|++++.++...+ +-|... ..+.+..+.. .+
T Consensus 7 i~~V~VIGaG~MG~gIA~~la~aG~~-V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~-~~ 84 (507)
T PRK08268 7 IATVAVIGAGAMGAGIAQVAAQAGHT-VLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEALA-DL 84 (507)
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCe-EEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH-Hh
Confidence 46899999999999999999999985 9999999987755211 112100 0112233443 35
Q ss_pred CCCcEEEEcCCCCccC
Q 010322 308 ADADVVFTSTASEAPL 323 (513)
Q Consensus 308 ~~aDVVI~AT~s~~~v 323 (513)
.++|+||+|.+....+
T Consensus 85 ~~aDlViEav~E~~~v 100 (507)
T PRK08268 85 ADCDLVVEAIVERLDV 100 (507)
T ss_pred CCCCEEEEcCcccHHH
Confidence 6999999998876543
No 303
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.89 E-value=0.0053 Score=63.18 Aligned_cols=166 Identities=17% Similarity=0.212 Sum_probs=94.5
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhh--------Ccccccccccc-CC
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISV--------GKRVRTETNIA-AG 223 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v--------~k~Vr~et~i~-~~ 223 (513)
..|+|+++.+..++++++.+-+|++.+...-. +.++.|.+++.+ +..+..+.... ..
T Consensus 76 ~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~--------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~ 141 (350)
T cd08248 76 TLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPP--------------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPY 141 (350)
T ss_pred eecceeEEEEEecCCCcccCCCCCEEEEecCC--------------CCCccceeEEEecHHHeecCCCCCCHHHHhhchh
Confidence 57999999999999999988999988752210 012333333333 33222222111 11
Q ss_pred CchHHHHHHHHHHhhCCCCC--CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc
Q 010322 224 AVSVSSAAVELALMKLPESS--HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL 300 (513)
Q Consensus 224 ~~Sva~~Av~la~~~~~~~~--l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~ 300 (513)
+...++.++..... + .. ..|.+|+|.|+ |.+|.+++..++..|+. |+++.++ ++. .++++++.. ..+...
T Consensus 142 ~~~ta~~~l~~~~~-~--~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~~~-~~~-~~~~~~g~~-~~~~~~ 214 (350)
T cd08248 142 AGLTAWSALVNVGG-L--NPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAH-VTTTCST-DAI-PLVKSLGAD-DVIDYN 214 (350)
T ss_pred HHHHHHHHHHHhcc-C--CCccCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCc-chH-HHHHHhCCc-eEEECC
Confidence 22233333221110 1 01 24899999995 99999999999999995 7776665 344 566777642 112111
Q ss_pred c-hHHh---hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEe
Q 010322 301 S-EMLS---CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFID 347 (513)
Q Consensus 301 ~-~~~~---~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiD 347 (513)
+ +... ...++|++|++++.+ .. ...++.+. ++|+.+.++
T Consensus 215 ~~~~~~~l~~~~~vd~vi~~~g~~-~~--~~~~~~l~-----~~G~~v~~g 257 (350)
T cd08248 215 NEDFEEELTERGKFDVILDTVGGD-TE--KWALKLLK-----KGGTYVTLV 257 (350)
T ss_pred ChhHHHHHHhcCCCCEEEECCChH-HH--HHHHHHhc-----cCCEEEEec
Confidence 1 1111 135799999999875 22 33444433 356565554
No 304
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=96.89 E-value=0.011 Score=60.40 Aligned_cols=147 Identities=16% Similarity=0.182 Sum_probs=85.9
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhh--------CccccccccccCCC
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISV--------GKRVRTETNIAAGA 224 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v--------~k~Vr~et~i~~~~ 224 (513)
..|+|+++.+..++++++...+|++.+..-. . ..++.|.+++.+ +..+..+.... .+
T Consensus 62 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---------~-----~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~-~~ 126 (336)
T cd08252 62 ILGWDASGVVEAVGSEVTLFKVGDEVYYAGD---------I-----TRPGSNAEYQLVDERIVGHKPKSLSFAEAAA-LP 126 (336)
T ss_pred ccccceEEEEEEcCCCCCCCCCCCEEEEcCC---------C-----CCCccceEEEEEchHHeeeCCCCCCHHHhhh-hh
Confidence 5799999999999999988889998764200 0 012233332222 22222221111 12
Q ss_pred ch--HHHHHHHHHHhhCCCCCCC-----CCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCccee
Q 010322 225 VS--VSSAAVELALMKLPESSHA-----TARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEII 296 (513)
Q Consensus 225 ~S--va~~Av~la~~~~~~~~l~-----g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~ 296 (513)
.+ .++.++. ... .... |.+|+|+|+ |.+|.+++..+...|..+|+++.++.++. .++.++|.. ..
T Consensus 127 ~~~~ta~~~l~---~~~--~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~-~~~~~~g~~-~~ 199 (336)
T cd08252 127 LTSLTAWEALF---DRL--GISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESI-AWVKELGAD-HV 199 (336)
T ss_pred hHHHHHHHHHH---Hhc--CCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhH-HHHHhcCCc-EE
Confidence 22 2233321 111 1223 889999995 99999999999999933588888888777 445667642 12
Q ss_pred ecccchH----Hhh-cCCCcEEEEcCCCCc
Q 010322 297 YKPLSEM----LSC-AADADVVFTSTASEA 321 (513)
Q Consensus 297 ~~~~~~~----~~~-l~~aDVVI~AT~s~~ 321 (513)
+...++. ... -.+.|++++|++.+.
T Consensus 200 ~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~ 229 (336)
T cd08252 200 INHHQDLAEQLEALGIEPVDYIFCLTDTDQ 229 (336)
T ss_pred EeCCccHHHHHHhhCCCCCCEEEEccCcHH
Confidence 2111111 111 146899999988643
No 305
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=96.88 E-value=0.0026 Score=69.89 Aligned_cols=76 Identities=20% Similarity=0.286 Sum_probs=52.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHH----------hCCcc--------eeecccchHHhh
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEE----------LNGVE--------IIYKPLSEMLSC 306 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~----------~g~~~--------~~~~~~~~~~~~ 306 (513)
.-++|.|||+|.||..++..+...|.. |+++|++++.++...+. -|... ..+....++. .
T Consensus 4 ~~~kV~VIGaG~MG~gIA~~la~aG~~-V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~-~ 81 (503)
T TIGR02279 4 NVVTVAVIGAGAMGAGIAQVAASAGHQ-VLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDLH-A 81 (503)
T ss_pred CccEEEEECcCHHHHHHHHHHHhCCCe-EEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCHH-H
Confidence 346799999999999999999999985 99999999877542111 11100 0011223443 3
Q ss_pred cCCCcEEEEcCCCCcc
Q 010322 307 AADADVVFTSTASEAP 322 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~ 322 (513)
+.++|+||+|.+....
T Consensus 82 l~~aDlVIEav~E~~~ 97 (503)
T TIGR02279 82 LADAGLVIEAIVENLE 97 (503)
T ss_pred hCCCCEEEEcCcCcHH
Confidence 5699999999887544
No 306
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=96.88 E-value=0.014 Score=57.50 Aligned_cols=97 Identities=18% Similarity=0.247 Sum_probs=65.9
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeC----------CHHHHHHHHHHhCCcc----eeecccchHHhhc
Q 010322 242 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNR----------SEERVAAICEELNGVE----IIYKPLSEMLSCA 307 (513)
Q Consensus 242 ~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nR----------s~~ra~~la~~~g~~~----~~~~~~~~~~~~l 307 (513)
.++.+++|+|.|.|.+|+.+++.|...|++-|.|++. +.+...++.++.+... ....+.+++..
T Consensus 27 ~~l~~~~v~I~G~G~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~~~~~~~~~~~~~i~~-- 104 (227)
T cd01076 27 IGLAGARVAIQGFGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGAERITNEELLE-- 104 (227)
T ss_pred CCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcccCCCceecCCcccee--
Confidence 4689999999999999999999999999975558887 6676666655554210 01122222222
Q ss_pred CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccC
Q 010322 308 ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISV 350 (513)
Q Consensus 308 ~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlav 350 (513)
..+||+|.|+.. .+++.+.+..+ +-.+++.-+.
T Consensus 105 ~~~Dvlip~a~~--~~i~~~~~~~l--------~a~~I~egAN 137 (227)
T cd01076 105 LDCDILIPAALE--NQITADNADRI--------KAKIIVEAAN 137 (227)
T ss_pred ecccEEEecCcc--CccCHHHHhhc--------eeeEEEeCCC
Confidence 379999999944 45666666543 2367777663
No 307
>PLN02256 arogenate dehydrogenase
Probab=96.88 E-value=0.0032 Score=64.74 Aligned_cols=94 Identities=21% Similarity=0.355 Sum_probs=62.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhc-CCCcEEEEcCCCCc
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCA-ADADVVFTSTASEA 321 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l-~~aDVVI~AT~s~~ 321 (513)
+..+.+|+|||+|.||..++..|...|. +|++++++.. .+.+..+|. . ...+..+.+ ..+|+||.||+...
T Consensus 33 ~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~--~~~a~~~gv---~--~~~~~~e~~~~~aDvVilavp~~~ 104 (304)
T PLN02256 33 KSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY--SDIAAELGV---S--FFRDPDDFCEEHPDVVLLCTSILS 104 (304)
T ss_pred cCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH--HHHHHHcCC---e--eeCCHHHHhhCCCCEEEEecCHHH
Confidence 3467899999999999999999999886 5999999864 245555553 1 234444444 46999999998653
Q ss_pred cCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 322 PLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 322 ~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
. .+.+..+.... .....+++|++
T Consensus 105 ~---~~vl~~l~~~~--l~~~~iviDv~ 127 (304)
T PLN02256 105 T---EAVLRSLPLQR--LKRSTLFVDVL 127 (304)
T ss_pred H---HHHHHhhhhhc--cCCCCEEEecC
Confidence 2 23333321000 01235788885
No 308
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.88 E-value=0.0041 Score=65.77 Aligned_cols=75 Identities=11% Similarity=0.220 Sum_probs=48.4
Q ss_pred HHHHhHhcCcccchhhHHHHHHHhhCccccccccccCCCchHHHHHHHHHHhhCCCCCCCCCeEEEEc-ccHHHHHHHHH
Q 010322 186 VVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIG-AGKMGKLVIKH 264 (513)
Q Consensus 186 A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIG-aG~mG~~ia~~ 264 (513)
..+.+.+.+.-...+..+|+..+....+.....+. .. .....++|+||| +|.||..++..
T Consensus 57 ~~~~~~~~~l~~~~~~~i~~~i~~~s~~~q~~~~~---------------~~----~~~~~~~I~IiGG~GlmG~slA~~ 117 (374)
T PRK11199 57 RRAEAEALGVPPDLIEDVLRRVMRESYSSENDKGF---------------KT----LNPDLRPVVIVGGKGQLGRLFAKM 117 (374)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHhHHhcc---------------cc----cCcccceEEEEcCCChhhHHHHHH
Confidence 34455555555556677777666544332211110 00 012357899999 89999999999
Q ss_pred HHHcCCCeEEEEeCCH
Q 010322 265 LVAKGCTKMVVVNRSE 280 (513)
Q Consensus 265 L~~~G~~~V~v~nRs~ 280 (513)
|...|.. |++++|+.
T Consensus 118 l~~~G~~-V~~~d~~~ 132 (374)
T PRK11199 118 LTLSGYQ-VRILEQDD 132 (374)
T ss_pred HHHCCCe-EEEeCCCc
Confidence 9999974 99999863
No 309
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=96.84 E-value=0.0036 Score=63.50 Aligned_cols=70 Identities=19% Similarity=0.298 Sum_probs=51.2
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcce-----e--ecccchHHhhcCCCcEEEEcCCCC
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEI-----I--YKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~-----~--~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
+|+|||+|.||..++..|...|. +|++++|+.++.+.+.+. +. .+ . ....++..+ +..+|+||.||++.
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~-~~~~d~vila~k~~ 77 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNEN-GL-RLEDGEITVPVLAADDPAE-LGPQDLVILAVKAY 77 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHc-CC-cccCCceeecccCCCChhH-cCCCCEEEEecccc
Confidence 69999999999999999999887 599999988777665543 21 11 0 011233333 37899999999976
Q ss_pred c
Q 010322 321 A 321 (513)
Q Consensus 321 ~ 321 (513)
.
T Consensus 78 ~ 78 (304)
T PRK06522 78 Q 78 (304)
T ss_pred c
Confidence 4
No 310
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=96.84 E-value=0.0055 Score=62.55 Aligned_cols=91 Identities=20% Similarity=0.267 Sum_probs=67.2
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhh
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSC 306 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~ 306 (513)
+.+.+++.+.. + -++.|++|+|||- .-+|+-++..|...|++ |++++..- .++.+.
T Consensus 151 p~avi~lL~~~-~-i~l~Gk~vvVIGRS~iVGkPla~lL~~~~AT-Vtvchs~T--------------------~nl~~~ 207 (299)
T PLN02516 151 PKGCLELLSRS-G-IPIKGKKAVVVGRSNIVGLPVSLLLLKADAT-VTVVHSRT--------------------PDPESI 207 (299)
T ss_pred HHHHHHHHHHh-C-CCCCCCEEEEECCCccchHHHHHHHHHCCCE-EEEeCCCC--------------------CCHHHH
Confidence 33445665542 2 4789999999999 66899999999999985 88886431 124455
Q ss_pred cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 307 AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
++.|||||+|+|.+ .+++.++++. | .++||.++-+
T Consensus 208 ~~~ADIvv~AvGk~-~~i~~~~vk~---------g-avVIDvGin~ 242 (299)
T PLN02516 208 VREADIVIAAAGQA-MMIKGDWIKP---------G-AAVIDVGTNA 242 (299)
T ss_pred HhhCCEEEEcCCCc-CccCHHHcCC---------C-CEEEEeeccc
Confidence 67899999999997 4567888753 3 6899998644
No 311
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.84 E-value=0.0053 Score=62.40 Aligned_cols=159 Identities=14% Similarity=0.183 Sum_probs=89.7
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchH---H-HHHHHhHhcCcccchhhHHHHHHHhhCcc----ccccccc----
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQV---K-QVVKVGQGVVGFGRNISGLFKHAISVGKR----VRTETNI---- 220 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQv---k-~A~~~a~~~~~~g~~L~~lf~~ai~v~k~----Vr~et~i---- 220 (513)
..||++++.+..+++++....+|+..+.... + .-+..|......|...++.|+.++.++.. ++.....
T Consensus 60 ~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~ 139 (336)
T cd08276 60 IPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAA 139 (336)
T ss_pred ccccceeEEEEEeCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhh
Confidence 4799999999999998887888987765321 0 01111111112232224444444444331 1111110
Q ss_pred c-CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecc
Q 010322 221 A-AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKP 299 (513)
Q Consensus 221 ~-~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~ 299 (513)
. .-+...+++++.. .. ....|.+|+|.|+|.+|.+++..+...|++ |+++.++.++.+.+. .++.. ..+..
T Consensus 140 ~~~~~~~~a~~~l~~----~~-~~~~g~~vli~g~g~~g~~~~~~a~~~G~~-v~~~~~~~~~~~~~~-~~g~~-~~~~~ 211 (336)
T cd08276 140 TLPCAGLTAWNALFG----LG-PLKPGDTVLVQGTGGVSLFALQFAKAAGAR-VIATSSSDEKLERAK-ALGAD-HVINY 211 (336)
T ss_pred hhhHHHHHHHHHHHh----hc-CCCCCCEEEEECCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH-HcCCC-EEEcC
Confidence 0 0111222333211 11 234688999999999999999999999986 888899888875544 46532 12211
Q ss_pred cc--h----HHhhc--CCCcEEEEcCCC
Q 010322 300 LS--E----MLSCA--ADADVVFTSTAS 319 (513)
Q Consensus 300 ~~--~----~~~~l--~~aDVVI~AT~s 319 (513)
.. + +.... .++|++|++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 239 (336)
T cd08276 212 RTTPDWGEEVLKLTGGRGVDHVVEVGGP 239 (336)
T ss_pred CcccCHHHHHHHHcCCCCCcEEEECCCh
Confidence 11 1 22222 369999999874
No 312
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.84 E-value=0.0055 Score=62.41 Aligned_cols=91 Identities=16% Similarity=0.307 Sum_probs=67.1
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhh
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSC 306 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~ 306 (513)
+.+.+++.+.. + .++.|++|+|||. .-+|+-++..|...|++ |+++...- .++.+.
T Consensus 144 p~avi~lL~~~-~-i~l~Gk~vvViGrS~iVGkPla~lL~~~~aT-Vt~chs~T--------------------~~l~~~ 200 (294)
T PRK14187 144 PKGCLYLIKTI-T-RNLSGSDAVVIGRSNIVGKPMACLLLGENCT-VTTVHSAT--------------------RDLADY 200 (294)
T ss_pred HHHHHHHHHHh-C-CCCCCCEEEEECCCccchHHHHHHHhhCCCE-EEEeCCCC--------------------CCHHHH
Confidence 33445665442 2 4789999999999 77899999999999985 88877531 123445
Q ss_pred cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 307 AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
+..|||||+|+|.|.. ++.++++. | .++||.++-+
T Consensus 201 ~~~ADIvVsAvGkp~~-i~~~~ik~---------g-aiVIDVGin~ 235 (294)
T PRK14187 201 CSKADILVAAVGIPNF-VKYSWIKK---------G-AIVIDVGINS 235 (294)
T ss_pred HhhCCEEEEccCCcCc-cCHHHcCC---------C-CEEEEecccc
Confidence 6789999999999976 57777743 2 7899998643
No 313
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.83 E-value=0.0022 Score=60.58 Aligned_cols=73 Identities=23% Similarity=0.353 Sum_probs=53.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 247 ARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 247 ~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
++|.|||| |.+|..+++.+..+|.. |+.+-|++.+...+ +........+...+.+.+.+.+.|+||+|-+.+.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHe-VTAivRn~~K~~~~-~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~ 74 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHE-VTAIVRNASKLAAR-QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGA 74 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCe-eEEEEeChHhcccc-ccceeecccccChhhhHhhhcCCceEEEeccCCC
Confidence 47999999 99999999999999985 99999999887443 1111111123333455577899999999987763
No 314
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=96.83 E-value=0.0072 Score=60.54 Aligned_cols=150 Identities=16% Similarity=0.232 Sum_probs=88.1
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccc-cCCCchHHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNI-AAGAVSVSSAA 231 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i-~~~~~Sva~~A 231 (513)
..|+++++.+..++++++..-+|+..+.-. ..+..+.++.---...+.++..+...... ...+..+++.+
T Consensus 60 ~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~---------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~ 130 (323)
T cd08241 60 VPGSEVAGVVEAVGEGVTGFKVGDRVVALT---------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHA 130 (323)
T ss_pred cccceeEEEEEEeCCCCCCCCCCCEEEEec---------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHH
Confidence 469999999999999888888888776421 01222222211112233444333222111 11223333443
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc-h----HHh
Q 010322 232 VELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS-E----MLS 305 (513)
Q Consensus 232 v~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~-~----~~~ 305 (513)
+... . ....+.+|+|.|+ |.+|.+++..+...|+. |+++.++.++.+ ++..++.. ..+.... + +..
T Consensus 131 ~~~~---~--~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~-~~~~~g~~-~~~~~~~~~~~~~i~~ 202 (323)
T cd08241 131 LVRR---A--RLQPGETVLVLGAAGGVGLAAVQLAKALGAR-VIAAASSEEKLA-LARALGAD-HVIDYRDPDLRERVKA 202 (323)
T ss_pred HHHh---c--CCCCCCEEEEEcCCchHHHHHHHHHHHhCCE-EEEEeCCHHHHH-HHHHcCCc-eeeecCCccHHHHHHH
Confidence 3211 1 2346899999998 99999999999999986 888888888774 44556531 1111111 1 122
Q ss_pred hc--CCCcEEEEcCCC
Q 010322 306 CA--ADADVVFTSTAS 319 (513)
Q Consensus 306 ~l--~~aDVVI~AT~s 319 (513)
.. .++|++++|++.
T Consensus 203 ~~~~~~~d~v~~~~g~ 218 (323)
T cd08241 203 LTGGRGVDVVYDPVGG 218 (323)
T ss_pred HcCCCCcEEEEECccH
Confidence 22 368999999886
No 315
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.82 E-value=0.0033 Score=60.54 Aligned_cols=78 Identities=24% Similarity=0.322 Sum_probs=53.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-------------------HHHHHHHHHhCCc--ceeeccc--
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-------------------ERVAAICEELNGV--EIIYKPL-- 300 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-------------------~ra~~la~~~g~~--~~~~~~~-- 300 (513)
+.+.+|+|+|+|++|..+++.|...|+.+|+++|... .|++.+++.+... .+.+.+.
T Consensus 19 L~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~ 98 (197)
T cd01492 19 LRSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD 98 (197)
T ss_pred HHhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec
Confidence 4678999999999999999999999999999997541 1344444433211 1122111
Q ss_pred ---chHHhhcCCCcEEEEcCCCCc
Q 010322 301 ---SEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 301 ---~~~~~~l~~aDVVI~AT~s~~ 321 (513)
+...+.+.++|+||.|+....
T Consensus 99 ~~~~~~~~~~~~~dvVi~~~~~~~ 122 (197)
T cd01492 99 DISEKPEEFFSQFDVVVATELSRA 122 (197)
T ss_pred CccccHHHHHhCCCEEEECCCCHH
Confidence 223455789999999987643
No 316
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.81 E-value=0.0049 Score=62.04 Aligned_cols=152 Identities=15% Similarity=0.155 Sum_probs=86.1
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccc-cCCCchHHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNI-AAGAVSVSSAA 231 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i-~~~~~Sva~~A 231 (513)
..|+|+++.+.++++++....+|+..+...-. ...+....+...--...+.+++.+..+... ...+...++++
T Consensus 61 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~ 134 (319)
T cd08267 61 IPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQA 134 (319)
T ss_pred cccceeeEEEEEeCCCCCCCCCCCEEEEeccC------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHH
Confidence 47999999999999999999999987643210 001111111100001122233322221111 11233444554
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc-hH-Hhh--
Q 010322 232 VELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS-EM-LSC-- 306 (513)
Q Consensus 232 v~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~-~~-~~~-- 306 (513)
+.... ....|.+|+|.|+ |.+|.+++..+...|++ |+++.++ ++. +++++++.. ..+.... +. ...
T Consensus 135 ~~~~~-----~~~~g~~vli~g~~g~~g~~~~~la~~~g~~-v~~~~~~-~~~-~~~~~~g~~-~~~~~~~~~~~~~~~~ 205 (319)
T cd08267 135 LRDAG-----KVKPGQRVLINGASGGVGTFAVQIAKALGAH-VTGVCST-RNA-ELVRSLGAD-EVIDYTTEDFVALTAG 205 (319)
T ss_pred HHHhc-----CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCE-EEEEeCH-HHH-HHHHHcCCC-EeecCCCCCcchhccC
Confidence 43221 1246899999998 99999999999999995 7777765 555 555777631 1111111 11 111
Q ss_pred cCCCcEEEEcCCC
Q 010322 307 AADADVVFTSTAS 319 (513)
Q Consensus 307 l~~aDVVI~AT~s 319 (513)
-.++|+||+|++.
T Consensus 206 ~~~~d~vi~~~~~ 218 (319)
T cd08267 206 GEKYDVIFDAVGN 218 (319)
T ss_pred CCCCcEEEECCCc
Confidence 1368999999985
No 317
>PLN02858 fructose-bisphosphate aldolase
Probab=96.81 E-value=0.011 Score=72.05 Aligned_cols=71 Identities=21% Similarity=0.259 Sum_probs=57.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCcc
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
..++|.|||.|.||..++..|...|. +|+++||++++.+.+... |. . ..++..+.+..+|+||.|.+.+..
T Consensus 323 ~~~~IGfIGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~-Ga---~--~~~s~~e~~~~aDvVi~~V~~~~~ 393 (1378)
T PLN02858 323 PVKRIGFIGLGAMGFGMASHLLKSNF-SVCGYDVYKPTLVRFENA-GG---L--AGNSPAEVAKDVDVLVIMVANEVQ 393 (1378)
T ss_pred CCCeEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc-CC---e--ecCCHHHHHhcCCEEEEecCChHH
Confidence 45789999999999999999999998 599999999998777654 32 1 124555667889999999997654
No 318
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.79 E-value=0.0028 Score=61.87 Aligned_cols=75 Identities=19% Similarity=0.318 Sum_probs=53.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC-cceeec-----ccchHHhh-------cCC
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG-VEIIYK-----PLSEMLSC-------AAD 309 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~-~~~~~~-----~~~~~~~~-------l~~ 309 (513)
+.+++++|+|+ |.+|..+++.|...|++ |++++|++++...+...+.. ..+.+. ..+++... ...
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGAR-VVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS 81 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 57889999998 99999999999999986 99999999887666655431 011111 11222222 246
Q ss_pred CcEEEEcCCC
Q 010322 310 ADVVFTSTAS 319 (513)
Q Consensus 310 aDVVI~AT~s 319 (513)
.|+||.+.+.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 7999999875
No 319
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.78 E-value=0.0039 Score=63.12 Aligned_cols=70 Identities=13% Similarity=0.246 Sum_probs=50.6
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCC---CeEEEEeCCH-HHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGC---TKMVVVNRSE-ERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~---~~V~v~nRs~-~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
.+|.|||+|.||..++..|...|. .+|.+++|+. ++...+...++. .. ...+..+.+.++|+||.|++..
T Consensus 2 ~~I~iIG~G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~--~~--~~~~~~e~~~~aDvVilavpp~ 75 (277)
T PRK06928 2 EKIGFIGYGSMADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPT--VE--LADNEAEIFTKCDHSFICVPPL 75 (277)
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCC--eE--EeCCHHHHHhhCCEEEEecCHH
Confidence 469999999999999999998872 4689999864 455555555432 12 1234445567899999999954
No 320
>PTZ00117 malate dehydrogenase; Provisional
Probab=96.78 E-value=0.0047 Score=63.92 Aligned_cols=76 Identities=18% Similarity=0.218 Sum_probs=53.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC------cceeecccchHHhhcCCCcEEEEcCC
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG------VEIIYKPLSEMLSCAADADVVFTSTA 318 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~------~~~~~~~~~~~~~~l~~aDVVI~AT~ 318 (513)
...+|.|||+|.||..++..+...|..+|.++|++.++++..+..+.. ....+....+.. .+.+||+||.+.+
T Consensus 4 ~~~KI~IIGaG~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVitag 82 (319)
T PTZ00117 4 KRKKISMIGAGQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVITAG 82 (319)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEECCC
Confidence 567999999999999999999888866799999988665433322211 011222224544 6799999999987
Q ss_pred CCc
Q 010322 319 SEA 321 (513)
Q Consensus 319 s~~ 321 (513)
.+.
T Consensus 83 ~~~ 85 (319)
T PTZ00117 83 VQR 85 (319)
T ss_pred CCC
Confidence 653
No 321
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.78 E-value=0.0064 Score=58.58 Aligned_cols=36 Identities=33% Similarity=0.629 Sum_probs=32.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCC
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRS 279 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs 279 (513)
+.+.+|+|+|+|++|..+++.|...|+.+|+++|.+
T Consensus 17 L~~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 17 LRSAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred HhhCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 467899999999999999999999999999998754
No 322
>PLN03129 NADP-dependent malic enzyme; Provisional
Probab=96.77 E-value=0.0056 Score=67.35 Aligned_cols=118 Identities=19% Similarity=0.325 Sum_probs=81.4
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHH-----cCC------CeEEEEeCC----HHH---H
Q 010322 222 AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVA-----KGC------TKMVVVNRS----EER---V 283 (513)
Q Consensus 222 ~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~-----~G~------~~V~v~nRs----~~r---a 283 (513)
+++.+|+.+++--|.+..+ ..+.+.+|+++|||..|..++..|.. .|. ++|+++|+. .+| .
T Consensus 298 QGTaaV~lAgll~A~r~~g-~~l~d~riv~~GAGsAgigia~ll~~~~~~~~Gls~eeA~~~i~~vD~~GLi~~~r~~~l 376 (581)
T PLN03129 298 QGTAAVALAGLLAALRATG-GDLADQRILFAGAGEAGTGIAELIALAMSRQTGISEEEARKRIWLVDSKGLVTKSRKDSL 376 (581)
T ss_pred chHHHHHHHHHHHHHHHhC-CchhhceEEEECCCHHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEcCCCeEeCCCCccC
Confidence 3556666666544444333 57889999999999999999998887 477 589988873 111 1
Q ss_pred ----HHHHHHhCCcceeecccchHHhhcCC--CcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 284 ----AAICEELNGVEIIYKPLSEMLSCAAD--ADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 284 ----~~la~~~g~~~~~~~~~~~~~~~l~~--aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
..+++. ..+..++.++++. +||+|-+++.+ .+|+++.++.+.. ...+.+++-+|.|-
T Consensus 377 ~~~k~~fa~~-------~~~~~~L~e~v~~vkptvLIG~S~~~-g~Ft~evi~~Ma~----~~~rPIIFaLSNPt 439 (581)
T PLN03129 377 QPFKKPFAHD-------HEPGASLLEAVKAIKPTVLIGLSGVG-GTFTKEVLEAMAS----LNERPIIFALSNPT 439 (581)
T ss_pred hHHHHHHHhh-------cccCCCHHHHHhccCCCEEEEecCCC-CCCCHHHHHHHHh----cCCCCEEEECCCCC
Confidence 233332 1133567788877 89999998866 4688998887642 13457888899884
No 323
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.77 E-value=0.0044 Score=62.71 Aligned_cols=71 Identities=23% Similarity=0.336 Sum_probs=49.4
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH-----------HHHHhCCcce--------eecccchHHhhc
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAA-----------ICEELNGVEI--------IYKPLSEMLSCA 307 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~-----------la~~~g~~~~--------~~~~~~~~~~~l 307 (513)
++|.|||+|.||..++..+...|. +|+++++++++++. +.+. +.... .+....+.. .+
T Consensus 4 ~kI~VIG~G~mG~~ia~~la~~g~-~V~~~d~~~~~~~~~~~~i~~~l~~~~~~-g~~~~~~~~~~~~~l~~~~~~~-~~ 80 (282)
T PRK05808 4 QKIGVIGAGTMGNGIAQVCAVAGY-DVVMVDISDAAVDRGLATITKSLDRLVKK-GKMTEADKEAALARITGTTDLD-DL 80 (282)
T ss_pred cEEEEEccCHHHHHHHHHHHHCCC-ceEEEeCCHHHHHHHHHHHHHHHHHHHHc-CCCCHHHHHHHHhCeEEeCCHH-Hh
Confidence 579999999999999999999998 59999999987742 1111 11000 111122333 36
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
.++|+||.|++..
T Consensus 81 ~~aDlVi~av~e~ 93 (282)
T PRK05808 81 KDADLVIEAATEN 93 (282)
T ss_pred ccCCeeeeccccc
Confidence 8899999998754
No 324
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=96.77 E-value=0.0038 Score=60.67 Aligned_cols=68 Identities=19% Similarity=0.370 Sum_probs=53.8
Q ss_pred eEEEEcccHHHHHHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 248 RMLVIGAGKMGKLVIKHLVAK--GCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~--G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
+|.+||+|.||..++..+..- +++-+.+++|+.+++..+.+.++.. ...++.+.+.+.|+|++|.+..
T Consensus 2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~-----~~s~ide~~~~~DlvVEaAS~~ 71 (255)
T COG1712 2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRR-----CVSDIDELIAEVDLVVEAASPE 71 (255)
T ss_pred eEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCC-----ccccHHHHhhccceeeeeCCHH
Confidence 689999999999999988753 5778999999999999888877642 1145556667888888886653
No 325
>PRK08328 hypothetical protein; Provisional
Probab=96.76 E-value=0.0047 Score=60.94 Aligned_cols=36 Identities=25% Similarity=0.499 Sum_probs=33.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCC
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRS 279 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs 279 (513)
+.+.+|+|+|+|++|..++..|...|+.+++++|.+
T Consensus 25 L~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 25 LKKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred HhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 467899999999999999999999999999999853
No 326
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.76 E-value=0.007 Score=61.47 Aligned_cols=91 Identities=15% Similarity=0.306 Sum_probs=66.5
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhh
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSC 306 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~ 306 (513)
+.+.+++.+.. + .++.|++|+|||- .-+|+-++..|...|++ |++++..- .++.+.
T Consensus 143 p~av~~lL~~y-~-i~l~GK~vvViGrS~iVGkPla~lL~~~~AT-Vtichs~T--------------------~~L~~~ 199 (288)
T PRK14171 143 ALGCLAVIKKY-E-PNLTGKNVVIIGRSNIVGKPLSALLLKENCS-VTICHSKT--------------------HNLSSI 199 (288)
T ss_pred HHHHHHHHHHh-C-CCCCCCEEEEECCCCcchHHHHHHHHHCCCE-EEEeCCCC--------------------CCHHHH
Confidence 33445665542 2 4789999999999 67899999999999985 88877421 123445
Q ss_pred cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 307 AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
+..|||||+|+|.|. +++.++++. | .++||.++-+
T Consensus 200 ~~~ADIvV~AvGkp~-~i~~~~vk~---------G-avVIDvGin~ 234 (288)
T PRK14171 200 TSKADIVVAAIGSPL-KLTAEYFNP---------E-SIVIDVGINR 234 (288)
T ss_pred HhhCCEEEEccCCCC-ccCHHHcCC---------C-CEEEEeeccc
Confidence 678999999999986 467777743 3 6899998643
No 327
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.76 E-value=0.0071 Score=61.75 Aligned_cols=92 Identities=17% Similarity=0.290 Sum_probs=67.8
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHh
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLS 305 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~ 305 (513)
++.+.+++.+. ++ -++.|++|+|||- .-+|+-++..|...|++ |+++.... .++.+
T Consensus 141 Tp~aii~lL~~-~~-i~l~Gk~vvVIGrS~iVGkPla~lL~~~~at-Vtv~hs~T--------------------~~l~~ 197 (297)
T PRK14186 141 TPAGVMRLLRS-QQ-IDIAGKKAVVVGRSILVGKPLALMLLAANAT-VTIAHSRT--------------------QDLAS 197 (297)
T ss_pred CHHHHHHHHHH-hC-CCCCCCEEEEECCCccchHHHHHHHHHCCCE-EEEeCCCC--------------------CCHHH
Confidence 44555666654 22 4789999999999 67899999999999985 88875421 12344
Q ss_pred hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 306 CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
.++.||+||+|+|.|.. ++.++++. | .++||.++-+
T Consensus 198 ~~~~ADIvIsAvGkp~~-i~~~~ik~---------g-avVIDvGin~ 233 (297)
T PRK14186 198 ITREADILVAAAGRPNL-IGAEMVKP---------G-AVVVDVGIHR 233 (297)
T ss_pred HHhhCCEEEEccCCcCc-cCHHHcCC---------C-CEEEEecccc
Confidence 56789999999999865 67777743 3 6899998654
No 328
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.0043 Score=63.04 Aligned_cols=77 Identities=17% Similarity=0.362 Sum_probs=55.2
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceee-----cccchHHhh-------c
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIY-----KPLSEMLSC-------A 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~-----~~~~~~~~~-------l 307 (513)
.+.+++++|.|+ |++|+.+++.|...|+ +|++++|+.++++++.+++.. ....+ .+.+++.+. .
T Consensus 37 ~~~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 37 DLTGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI 115 (293)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 467899999998 9999999999999998 599999999888777665421 01111 111222222 3
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|+||++.|..
T Consensus 116 g~id~li~~AG~~ 128 (293)
T PRK05866 116 GGVDILINNAGRS 128 (293)
T ss_pred CCCCEEEECCCCC
Confidence 4789999998764
No 329
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.73 E-value=0.0043 Score=64.13 Aligned_cols=73 Identities=14% Similarity=0.223 Sum_probs=52.4
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh------CCcce--eecccchHHhhc-CCCcEEEEcCC
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL------NGVEI--IYKPLSEMLSCA-ADADVVFTSTA 318 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~------g~~~~--~~~~~~~~~~~l-~~aDVVI~AT~ 318 (513)
+|.|||+|.||.+++..|...|. +|++++|+.+..+.+.+.. .+... .+....+..+.+ ..+|+||-|++
T Consensus 2 kI~IiGaGa~G~ala~~L~~~g~-~V~l~~r~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~Dliiiavk 80 (326)
T PRK14620 2 KISILGAGSFGTAIAIALSSKKI-SVNLWGRNHTTFESINTKRKNLKYLPTCHLPDNISVKSAIDEVLSDNATCIILAVP 80 (326)
T ss_pred EEEEECcCHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCcccCCCCcCCCCeEEeCCHHHHHhCCCCEEEEEeC
Confidence 69999999999999999999986 5999999988877776531 11000 011123444444 58999999999
Q ss_pred CCc
Q 010322 319 SEA 321 (513)
Q Consensus 319 s~~ 321 (513)
+..
T Consensus 81 s~~ 83 (326)
T PRK14620 81 TQQ 83 (326)
T ss_pred HHH
Confidence 864
No 330
>PRK13529 malate dehydrogenase; Provisional
Probab=96.73 E-value=0.012 Score=64.72 Aligned_cols=123 Identities=17% Similarity=0.302 Sum_probs=81.3
Q ss_pred CCCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHH----cCC------CeEEEEeCC----HH------
Q 010322 222 AGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVA----KGC------TKMVVVNRS----EE------ 281 (513)
Q Consensus 222 ~~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~----~G~------~~V~v~nRs----~~------ 281 (513)
+++.+|..+++--|-+..+ ..+.+.+++++|||..|..++..|.. .|. ++|+++|+. .+
T Consensus 272 QGTaaV~LAgll~A~r~~g-~~l~d~riv~~GAGsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~~ 350 (563)
T PRK13529 272 QGTGAVTLAGLLAALKITG-EPLSDQRIVFLGAGSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLLD 350 (563)
T ss_pred chHHHHHHHHHHHHHHHhC-CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcchH
Confidence 3555666666544444433 56889999999999999999998886 688 589998874 11
Q ss_pred HHHHHHHHhCCccee-e---cccchHHhhcCCC--cEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 282 RVAAICEELNGVEII-Y---KPLSEMLSCAADA--DVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 282 ra~~la~~~g~~~~~-~---~~~~~~~~~l~~a--DVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
....+++.... .. + ....++.++++.+ |++|-+++.+ .+|+++.++.+.+. ..+.+++-||.|-
T Consensus 351 ~k~~fa~~~~~--~~~~~~~~~~~~L~e~v~~~kPtvLIG~S~~~-g~Ft~evv~~Ma~~----~erPIIFaLSNPt 420 (563)
T PRK13529 351 FQKPYARKREE--LADWDTEGDVISLLEVVRNVKPTVLIGVSGQP-GAFTEEIVKEMAAH----CERPIIFPLSNPT 420 (563)
T ss_pred HHHHHhhhccc--ccccccccCCCCHHHHHhccCCCEEEEecCCC-CCCCHHHHHHHHhc----CCCCEEEECCCcC
Confidence 11233432110 00 0 0113677888877 9999988765 46788888876532 2457888888885
No 331
>PRK07411 hypothetical protein; Validated
Probab=96.72 E-value=0.0057 Score=65.05 Aligned_cols=78 Identities=21% Similarity=0.244 Sum_probs=54.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-------------------HHHHHHHHHhC----Ccceeecc-
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-------------------ERVAAICEELN----GVEIIYKP- 299 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-------------------~ra~~la~~~g----~~~~~~~~- 299 (513)
+...+|+|+|+|++|..++++|...|+.+++++|.+. .|++..++.+. ...+...+
T Consensus 36 L~~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~ 115 (390)
T PRK07411 36 LKAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYET 115 (390)
T ss_pred HhcCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEec
Confidence 4678999999999999999999999999999988641 13434444332 11122111
Q ss_pred ---cchHHhhcCCCcEEEEcCCCCc
Q 010322 300 ---LSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 300 ---~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
.++..+.+.++|+||+||....
T Consensus 116 ~~~~~~~~~~~~~~D~Vvd~~d~~~ 140 (390)
T PRK07411 116 RLSSENALDILAPYDVVVDGTDNFP 140 (390)
T ss_pred ccCHHhHHHHHhCCCEEEECCCCHH
Confidence 1233456789999999998754
No 332
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.0071 Score=59.62 Aligned_cols=77 Identities=19% Similarity=0.265 Sum_probs=54.5
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCccee--ecccchHHhh-------cCCCcE
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEII--YKPLSEMLSC-------AADADV 312 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~--~~~~~~~~~~-------l~~aDV 312 (513)
.+.|++|+|+|+ |.+|..+++.|...|++ |++++|+..+.+.+.+.++..... +...+++... ....|+
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGAT-VVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 467899999999 99999999999999985 999999988776666655421111 1111222222 246799
Q ss_pred EEEcCCCC
Q 010322 313 VFTSTASE 320 (513)
Q Consensus 313 VI~AT~s~ 320 (513)
||.+.+..
T Consensus 83 vi~~ag~~ 90 (255)
T PRK06057 83 AFNNAGIS 90 (255)
T ss_pred EEECCCcC
Confidence 99988753
No 333
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=96.71 E-value=0.014 Score=58.38 Aligned_cols=156 Identities=16% Similarity=0.193 Sum_probs=88.1
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCcccccccccc-CCCchHHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIA-AGAVSVSSAA 231 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~-~~~~Sva~~A 231 (513)
..|||+++.+..+++++...-+|+........ + ....|....++..-....+.++..+..+.... ..+...++.+
T Consensus 60 ~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~--~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~ 135 (325)
T cd08253 60 VPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLG--W--GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRA 135 (325)
T ss_pred ecccceEEEEEeeCCCCCCCCCCCEEEEeccc--c--CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHH
Confidence 47999999999999999888889877653200 0 00011111111111112222332222111111 1122333333
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc--c---hHHh
Q 010322 232 VELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL--S---EMLS 305 (513)
Q Consensus 232 v~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~--~---~~~~ 305 (513)
+... . .-..|++|+|.|+ |.+|..+++.+...|++ |+++.++.++.+.+ ..++.. ..+... + .+.+
T Consensus 136 l~~~---~--~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~~~~~ 207 (325)
T cd08253 136 LFHR---A--GAKAGETVLVHGGSGAVGHAAVQLARWAGAR-VIATASSAEGAELV-RQAGAD-AVFNYRAEDLADRILA 207 (325)
T ss_pred HHHH---h--CCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHH-HHcCCC-EEEeCCCcCHHHHHHH
Confidence 3221 1 2346899999996 99999999999999985 89999998887544 556532 111111 1 1222
Q ss_pred hc--CCCcEEEEcCCCC
Q 010322 306 CA--ADADVVFTSTASE 320 (513)
Q Consensus 306 ~l--~~aDVVI~AT~s~ 320 (513)
.. .+.|+||+|++..
T Consensus 208 ~~~~~~~d~vi~~~~~~ 224 (325)
T cd08253 208 ATAGQGVDVIIEVLANV 224 (325)
T ss_pred HcCCCceEEEEECCchH
Confidence 22 3689999998774
No 334
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=96.70 E-value=0.0086 Score=59.28 Aligned_cols=166 Identities=16% Similarity=0.142 Sum_probs=98.9
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCcc--ccccccccCCCchHH-
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKR--VRTETNIAAGAVSVS- 228 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~--Vr~et~i~~~~~Sva- 228 (513)
...|.||++.+..|+.|+....+|+....-.--.+| ++...+|.. ..-.. ..++-++
T Consensus 66 ytpGmEaaGvVvAvG~gvtdrkvGDrVayl~~~g~y-----------------aee~~vP~~kv~~vpe---~i~~k~aa 125 (336)
T KOG1197|consen 66 YTPGMEAAGVVVAVGEGVTDRKVGDRVAYLNPFGAY-----------------AEEVTVPSVKVFKVPE---AITLKEAA 125 (336)
T ss_pred cCCCcccceEEEEecCCccccccccEEEEeccchhh-----------------heeccccceeeccCCc---ccCHHHHH
Confidence 357999999999999999999999976642211222 222222210 00000 0111111
Q ss_pred ------HHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc
Q 010322 229 ------SAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS 301 (513)
Q Consensus 229 ------~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~ 301 (513)
..|.-+..+.+ .-.+|.+|+|--| |++|.+.+++|+..|+. ++.+.-|.++. +.+.+.|.........+
T Consensus 126 a~llq~lTAy~ll~e~y--~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~-tI~~asTaeK~-~~akenG~~h~I~y~~e 201 (336)
T KOG1197|consen 126 ALLLQGLTAYMLLFEAY--NVKPGHTVLVHAAAGGVGLLLCQLLRAVGAH-TIATASTAEKH-EIAKENGAEHPIDYSTE 201 (336)
T ss_pred HHHHHHHHHHHHHHHhc--CCCCCCEEEEEeccccHHHHHHHHHHhcCcE-EEEEeccHHHH-HHHHhcCCcceeeccch
Confidence 22223333333 3457999999876 99999999999999986 44455566776 66777775321112234
Q ss_pred hHHhh------cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 302 EMLSC------AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 302 ~~~~~------l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
|..+. -++.|++.+..|-...-.. +..+. +.|.++-++.+
T Consensus 202 D~v~~V~kiTngKGVd~vyDsvG~dt~~~s---l~~Lk-----~~G~mVSfG~a 247 (336)
T KOG1197|consen 202 DYVDEVKKITNGKGVDAVYDSVGKDTFAKS---LAALK-----PMGKMVSFGNA 247 (336)
T ss_pred hHHHHHHhccCCCCceeeeccccchhhHHH---HHHhc-----cCceEEEeccc
Confidence 43322 2489999999988765322 33322 34667767664
No 335
>PRK06223 malate dehydrogenase; Reviewed
Probab=96.69 E-value=0.0053 Score=62.92 Aligned_cols=74 Identities=18% Similarity=0.236 Sum_probs=52.1
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC------cceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG------VEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~------~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
++|.|||+|.||..++..+...|..+|.++|+++++++..+..+.. ....+....+. +.+.+||+||.|.+.|
T Consensus 3 ~KI~VIGaG~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~~p 81 (307)
T PRK06223 3 KKISIIGAGNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAGVP 81 (307)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCCCC
Confidence 5899999999999999999988743799999988766544432211 01122222344 4578999999998765
Q ss_pred c
Q 010322 321 A 321 (513)
Q Consensus 321 ~ 321 (513)
.
T Consensus 82 ~ 82 (307)
T PRK06223 82 R 82 (307)
T ss_pred C
Confidence 4
No 336
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.69 E-value=0.011 Score=60.03 Aligned_cols=150 Identities=18% Similarity=0.182 Sum_probs=86.7
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCcccccccccc-CCCchHHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIA-AGAVSVSSAA 231 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~-~~~~Sva~~A 231 (513)
..|+++.+.+..+++++...-+|+....-.. .|....+...--.....++..+..+.... ..+...++.+
T Consensus 60 ~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~ 130 (331)
T cd08273 60 TPGYDLVGRVDALGSGVTGFEVGDRVAALTR---------VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQM 130 (331)
T ss_pred ccccceEEEEEEeCCCCccCCCCCEEEEeCC---------CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHH
Confidence 4699999999999999988888987765210 11111111100012223333332222111 1233344444
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc-chHH--hh-
Q 010322 232 VELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL-SEML--SC- 306 (513)
Q Consensus 232 v~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~-~~~~--~~- 306 (513)
+... . ....|.+|+|.|+ |.+|.+++..++..|++ |+++.+ ..+. .++..+|.. .+... .+.. ..
T Consensus 131 l~~~---~--~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-v~~~~~-~~~~-~~~~~~g~~--~~~~~~~~~~~~~~~ 200 (331)
T cd08273 131 LHRA---A--KVLTGQRVLIHGASGGVGQALLELALLAGAE-VYGTAS-ERNH-AALRELGAT--PIDYRTKDWLPAMLT 200 (331)
T ss_pred HHHh---c--CCCCCCEEEEECCCcHHHHHHHHHHHHcCCE-EEEEeC-HHHH-HHHHHcCCe--EEcCCCcchhhhhcc
Confidence 3221 1 2347899999997 99999999999999985 777766 6665 555667631 12111 1111 11
Q ss_pred cCCCcEEEEcCCCCc
Q 010322 307 AADADVVFTSTASEA 321 (513)
Q Consensus 307 l~~aDVVI~AT~s~~ 321 (513)
-.++|++++|+++..
T Consensus 201 ~~~~d~vl~~~~~~~ 215 (331)
T cd08273 201 PGGVDVVFDGVGGES 215 (331)
T ss_pred CCCceEEEECCchHH
Confidence 136899999998764
No 337
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.0075 Score=61.23 Aligned_cols=77 Identities=27% Similarity=0.397 Sum_probs=57.0
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc-ceee--ccc---chHHh-------hcC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV-EIIY--KPL---SEMLS-------CAA 308 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~-~~~~--~~~---~~~~~-------~l~ 308 (513)
++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.+++++++++++.. .+.. .+. +++.+ ...
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999998 9999999999999998 5999999999988888877521 1111 111 22222 235
Q ss_pred CCcEEEEcCCCC
Q 010322 309 DADVVFTSTASE 320 (513)
Q Consensus 309 ~aDVVI~AT~s~ 320 (513)
..|+||++.|..
T Consensus 85 ~id~vI~nAG~~ 96 (296)
T PRK05872 85 GIDVVVANAGIA 96 (296)
T ss_pred CCCEEEECCCcC
Confidence 689999998763
No 338
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.011 Score=58.79 Aligned_cols=76 Identities=14% Similarity=0.092 Sum_probs=54.8
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc---chH-------HhhcCCCcE
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL---SEM-------LSCAADADV 312 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~---~~~-------~~~l~~aDV 312 (513)
+.+++++|.|+ |++|+.+++.|...|+. |++++|+++++..+...++.......+. +++ .+.....|+
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGAR-VAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 56889999999 99999999999999985 9999999998877776654211111112 222 122356899
Q ss_pred EEEcCCCC
Q 010322 313 VFTSTASE 320 (513)
Q Consensus 313 VI~AT~s~ 320 (513)
+|++.+..
T Consensus 82 li~~ag~~ 89 (273)
T PRK07825 82 LVNNAGVM 89 (273)
T ss_pred EEECCCcC
Confidence 99998754
No 339
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=96.68 E-value=0.0076 Score=62.46 Aligned_cols=91 Identities=19% Similarity=0.210 Sum_probs=66.9
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhh
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSC 306 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~ 306 (513)
+.+.+++.+.. + .++.|++|+|||- .-+|+-++..|...|+. |+++...- .++.+.
T Consensus 198 p~avi~LL~~~-~-i~l~GK~vvVIGRS~iVGkPla~LL~~~~AT-VTicHs~T--------------------~nl~~~ 254 (345)
T PLN02897 198 PKGCVELLIRS-G-VEIAGKNAVVIGRSNIVGLPMSLLLQRHDAT-VSTVHAFT--------------------KDPEQI 254 (345)
T ss_pred HHHHHHHHHHh-C-CCCCCCEEEEECCCccccHHHHHHHHHCCCE-EEEEcCCC--------------------CCHHHH
Confidence 34445665442 2 4789999999999 66899999999999985 88776421 123445
Q ss_pred cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 307 AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
++.|||||+|+|.|.. ++.++++. | .++||+++-+
T Consensus 255 ~~~ADIvIsAvGkp~~-v~~d~vk~---------G-avVIDVGin~ 289 (345)
T PLN02897 255 TRKADIVIAAAGIPNL-VRGSWLKP---------G-AVVIDVGTTP 289 (345)
T ss_pred HhhCCEEEEccCCcCc-cCHHHcCC---------C-CEEEEccccc
Confidence 6789999999999976 67788753 3 6899998644
No 340
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.68 E-value=0.0087 Score=60.63 Aligned_cols=92 Identities=16% Similarity=0.291 Sum_probs=67.3
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHh
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLS 305 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~ 305 (513)
++.+.+++.+.. + -++.|++|+|||- .-+|+-++..|...|+. |+++...- .++.+
T Consensus 140 Tp~avi~ll~~~-~-i~l~Gk~vvViGrS~iVGkPla~lL~~~~At-Vtichs~T--------------------~nl~~ 196 (282)
T PRK14182 140 TPAGVMRMLDEA-R-VDPKGKRALVVGRSNIVGKPMAMMLLERHAT-VTIAHSRT--------------------ADLAG 196 (282)
T ss_pred CHHHHHHHHHHh-C-CCCCCCEEEEECCCCcchHHHHHHHHHCCCE-EEEeCCCC--------------------CCHHH
Confidence 344555665542 2 4689999999999 67899999999999984 88876431 12345
Q ss_pred hcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 306 CAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
.++.||+||+|+|.+.. ++.++++. | .++||.++-+
T Consensus 197 ~~~~ADIvI~AvGk~~~-i~~~~ik~---------g-aiVIDvGin~ 232 (282)
T PRK14182 197 EVGRADILVAAIGKAEL-VKGAWVKE---------G-AVVIDVGMNR 232 (282)
T ss_pred HHhhCCEEEEecCCcCc-cCHHHcCC---------C-CEEEEeecee
Confidence 56789999999998764 67777743 2 7899998644
No 341
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p. This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.
Probab=96.67 E-value=0.0055 Score=68.20 Aligned_cols=56 Identities=23% Similarity=0.471 Sum_probs=43.0
Q ss_pred CCchHHHHHHHHHHhhC-----CC---CCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeC
Q 010322 223 GAVSVSSAAVELALMKL-----PE---SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNR 278 (513)
Q Consensus 223 ~~~Sva~~Av~la~~~~-----~~---~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nR 278 (513)
.|..++-.||++--+.+ ++ ..+.+.+|+|+|+|+.|..++++|...|+++|+++|.
T Consensus 307 dP~~la~~avdlnlkLmkWRllP~l~~ekL~~~kVLIvGaGGLGs~VA~~La~~GVg~ItlVD~ 370 (664)
T TIGR01381 307 DPKRLAERSVDLNLKLMKWRLHPDLQLERYSQLKVLLLGAGTLGCNVARCLIGWGVRHITFVDN 370 (664)
T ss_pred CHHHHHHHHHHHHHHHHhhhcCChhhHHHHhcCeEEEECCcHHHHHHHHHHHHcCCCeEEEEcC
Confidence 56777777776532221 11 2246889999999999999999999999999999875
No 342
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.67 E-value=0.0084 Score=60.89 Aligned_cols=92 Identities=12% Similarity=0.261 Sum_probs=66.6
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHc----CCCeEEEEeCCHHHHHHHHHHhCCcceeecccc
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAK----GCTKMVVVNRSEERVAAICEELNGVEIIYKPLS 301 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~----G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~ 301 (513)
++.+.+++.+. .+ -++.|++|+|||- .-+|+-++..|... ++ .|++++... .
T Consensus 136 Tp~avi~lL~~-~~-i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~A-tVtvchs~T--------------------~ 192 (287)
T PRK14181 136 TPAGIIELLKY-YE-IPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNA-TVTLLHSQS--------------------E 192 (287)
T ss_pred CHHHHHHHHHH-hC-CCCCCCEEEEECCCccchHHHHHHHHhCcCCCCC-EEEEeCCCC--------------------C
Confidence 34444566553 22 4789999999999 66899999999988 55 488776421 1
Q ss_pred hHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 302 EMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 302 ~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
++.+.+..||+||+|+|.|.. ++.++++. | .++||.++-+
T Consensus 193 ~l~~~~~~ADIvV~AvG~p~~-i~~~~ik~---------G-avVIDvGin~ 232 (287)
T PRK14181 193 NLTEILKTADIIIAAIGVPLF-IKEEMIAE---------K-AVIVDVGTSR 232 (287)
T ss_pred CHHHHHhhCCEEEEccCCcCc-cCHHHcCC---------C-CEEEEecccc
Confidence 344556789999999999965 67788743 3 7899998644
No 343
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=96.67 E-value=0.0082 Score=59.22 Aligned_cols=76 Identities=18% Similarity=0.320 Sum_probs=57.0
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC-c--ce--eecccch-------HHhhcCC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG-V--EI--IYKPLSE-------MLSCAAD 309 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~-~--~~--~~~~~~~-------~~~~l~~ 309 (513)
.+.++.++|-|| +++|.++++.|...|++ |.++.|+.+|+++++.+++. . .. .+.+.++ +.+....
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~-vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGAK-VVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCCe-EEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCc
Confidence 356788999999 99999999999999995 99999999999999999982 1 11 1111212 2233457
Q ss_pred CcEEEEcCCC
Q 010322 310 ADVVFTSTAS 319 (513)
Q Consensus 310 aDVVI~AT~s 319 (513)
.|++|+-.|.
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 8988886554
No 344
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=96.65 E-value=0.0089 Score=62.31 Aligned_cols=91 Identities=16% Similarity=0.246 Sum_probs=67.6
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhh
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSC 306 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~ 306 (513)
+...+++.+. .+ .++.|++|+|||- .-+|+-++..|...|+. |+++...- .++.+.
T Consensus 215 p~avielL~~-y~-i~l~GK~vvVIGRS~iVGkPLa~LL~~~~AT-VTicHs~T--------------------~nl~~~ 271 (364)
T PLN02616 215 PKGCIELLHR-YN-VEIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT--------------------KNPEEI 271 (364)
T ss_pred HHHHHHHHHH-hC-CCCCCCEEEEECCCccccHHHHHHHHHCCCe-EEEeCCCC--------------------CCHHHH
Confidence 3344566553 22 4789999999999 77899999999999985 88876421 234455
Q ss_pred cCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 307 AADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 307 l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
++.|||||.|+|.|.. ++.++++. | .++||+++-+
T Consensus 272 ~r~ADIVIsAvGkp~~-i~~d~vK~---------G-AvVIDVGIn~ 306 (364)
T PLN02616 272 TREADIIISAVGQPNM-VRGSWIKP---------G-AVVIDVGINP 306 (364)
T ss_pred HhhCCEEEEcCCCcCc-CCHHHcCC---------C-CEEEeccccc
Confidence 6789999999999976 67777743 3 7899998644
No 345
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=96.65 E-value=0.0052 Score=70.56 Aligned_cols=70 Identities=23% Similarity=0.364 Sum_probs=54.0
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGC-TKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~-~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
++|+|||+|.||..+++.|...|. .+|++++|++++.+. +.++|.. .....+..+.+.++|+||.|++..
T Consensus 4 ~~I~IIG~G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~-a~~~g~~---~~~~~~~~~~~~~aDvVilavp~~ 74 (735)
T PRK14806 4 GRVVVIGLGLIGGSFAKALRERGLAREVVAVDRRAKSLEL-AVSLGVI---DRGEEDLAEAVSGADVIVLAVPVL 74 (735)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCCEEEEEECChhHHHH-HHHCCCC---CcccCCHHHHhcCCCEEEECCCHH
Confidence 679999999999999999999884 469999999888744 4455421 112345556678999999999864
No 346
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=96.65 E-value=0.0052 Score=65.33 Aligned_cols=71 Identities=18% Similarity=0.269 Sum_probs=50.7
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC------------cceeecccchHHhhcCCCcEEEE
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG------------VEIIYKPLSEMLSCAADADVVFT 315 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~------------~~~~~~~~~~~~~~l~~aDVVI~ 315 (513)
+|.|||+|-||..++..+. .|. +|+++|+++++.+.+.+.... ....+....+..+.+.++|+||.
T Consensus 2 kI~VIGlGyvGl~~A~~lA-~G~-~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii 79 (388)
T PRK15057 2 KITISGTGYVGLSNGLLIA-QNH-EVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVII 79 (388)
T ss_pred EEEEECCCHHHHHHHHHHH-hCC-cEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEE
Confidence 6999999999999997665 586 599999999998777652110 00112122234455689999999
Q ss_pred cCCCC
Q 010322 316 STASE 320 (513)
Q Consensus 316 AT~s~ 320 (513)
|++.+
T Consensus 80 ~Vpt~ 84 (388)
T PRK15057 80 ATPTD 84 (388)
T ss_pred eCCCC
Confidence 99987
No 347
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.63 E-value=0.0044 Score=65.96 Aligned_cols=78 Identities=23% Similarity=0.298 Sum_probs=53.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-------------------HHHHHHHHHhC----Ccceeecc-
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-------------------ERVAAICEELN----GVEIIYKP- 299 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-------------------~ra~~la~~~g----~~~~~~~~- 299 (513)
+.+.+|+|||+|++|..++.+|...|+.+|+++|.+. .|++..++.+. ...+...+
T Consensus 40 L~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~ 119 (392)
T PRK07878 40 LKNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF 119 (392)
T ss_pred HhcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence 4678999999999999999999999999999988631 13433333321 11121111
Q ss_pred ---cchHHhhcCCCcEEEEcCCCCc
Q 010322 300 ---LSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 300 ---~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
.++..+.+.++|+||+||....
T Consensus 120 ~i~~~~~~~~~~~~D~Vvd~~d~~~ 144 (392)
T PRK07878 120 RLDPSNAVELFSQYDLILDGTDNFA 144 (392)
T ss_pred cCChhHHHHHHhcCCEEEECCCCHH
Confidence 1234456789999999987753
No 348
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.63 E-value=0.0068 Score=66.08 Aligned_cols=74 Identities=24% Similarity=0.273 Sum_probs=53.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
.+.+++|+|+|+|..|+++++.|...|+ .|+++|++.....++...+|. .+.......+.+.++|+||-+.+.+
T Consensus 12 ~~~~~~v~v~G~G~sG~a~a~~L~~~G~-~V~~~D~~~~~~~~~l~~~gi---~~~~~~~~~~~~~~~d~vV~Spgi~ 85 (473)
T PRK00141 12 QELSGRVLVAGAGVSGRGIAAMLSELGC-DVVVADDNETARHKLIEVTGV---ADISTAEASDQLDSFSLVVTSPGWR 85 (473)
T ss_pred cccCCeEEEEccCHHHHHHHHHHHHCCC-EEEEECCChHHHHHHHHhcCc---EEEeCCCchhHhcCCCEEEeCCCCC
Confidence 3578899999999999999999999999 699999987655444444442 2322212223356789999877664
No 349
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.63 E-value=0.009 Score=60.99 Aligned_cols=91 Identities=16% Similarity=0.308 Sum_probs=66.2
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHc----CCCeEEEEeCCHHHHHHHHHHhCCcceeecccch
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAK----GCTKMVVVNRSEERVAAICEELNGVEIIYKPLSE 302 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~----G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~ 302 (513)
+.+.+++.+. .+ .++.|++|+|||. .-+|+-++..|... ++ .|+++...- .+
T Consensus 145 p~avi~lL~~-~~-i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~a-tVtv~hs~T--------------------~~ 201 (297)
T PRK14168 145 PAGIQEMLVR-SG-VETSGAEVVVVGRSNIVGKPIANMMTQKGPGANA-TVTIVHTRS--------------------KN 201 (297)
T ss_pred HHHHHHHHHH-hC-CCCCCCEEEEECCCCcccHHHHHHHHhcccCCCC-EEEEecCCC--------------------cC
Confidence 4444566543 22 4789999999999 77899999999887 45 488875421 13
Q ss_pred HHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 303 MLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 303 ~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
+.+.++.||+||+|+|-|.. ++.++++. | .++||.++.+
T Consensus 202 l~~~~~~ADIvVsAvGkp~~-i~~~~ik~---------g-avVIDvGin~ 240 (297)
T PRK14168 202 LARHCQRADILIVAAGVPNL-VKPEWIKP---------G-ATVIDVGVNR 240 (297)
T ss_pred HHHHHhhCCEEEEecCCcCc-cCHHHcCC---------C-CEEEecCCCc
Confidence 44556789999999999875 57777743 3 6899998654
No 350
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.62 E-value=0.0054 Score=62.30 Aligned_cols=73 Identities=22% Similarity=0.337 Sum_probs=49.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHHhCCcceeecccch-HHhhcCCCcEEEEcCCCCcc
Q 010322 246 TARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVA-AICEELNGVEIIYKPLSE-MLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 246 g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~-~la~~~g~~~~~~~~~~~-~~~~l~~aDVVI~AT~s~~~ 322 (513)
..+|+|+|.|.||.++++.|+..|.. +.+++++..... +.+.++|.. .....+ ....+.++|+||-|+|....
T Consensus 3 ~~~v~IvG~GliG~s~a~~l~~~g~~-v~i~g~d~~~~~~~~a~~lgv~---d~~~~~~~~~~~~~aD~VivavPi~~~ 77 (279)
T COG0287 3 SMKVGIVGLGLMGGSLARALKEAGLV-VRIIGRDRSAATLKAALELGVI---DELTVAGLAEAAAEADLVIVAVPIEAT 77 (279)
T ss_pred CcEEEEECCchHHHHHHHHHHHcCCe-EEEEeecCcHHHHHHHhhcCcc---cccccchhhhhcccCCEEEEeccHHHH
Confidence 46899999999999999999999985 656666554432 333345431 111122 24556789999999988643
No 351
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively. This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.
Probab=96.61 E-value=0.0082 Score=61.31 Aligned_cols=31 Identities=29% Similarity=0.581 Sum_probs=29.0
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeC
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNR 278 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nR 278 (513)
+|+|+|+|++|..++++|...|+.+|+++|.
T Consensus 1 kVLIvGaGGLGs~vA~~La~aGVg~ItlvD~ 31 (307)
T cd01486 1 KCLLLGAGTLGCNVARNLLGWGVRHITFVDS 31 (307)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 5899999999999999999999999998774
No 352
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=96.61 E-value=0.014 Score=57.20 Aligned_cols=95 Identities=19% Similarity=0.270 Sum_probs=63.9
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH----------HHHHHHHHHhCCcc-e---eecccchHHhhc
Q 010322 242 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE----------ERVAAICEELNGVE-I---IYKPLSEMLSCA 307 (513)
Q Consensus 242 ~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~----------~ra~~la~~~g~~~-~---~~~~~~~~~~~l 307 (513)
.++.|++|+|.|.|.+|+.+++.|...|.+.|.++|.+. +.. +...+.+... . ...+.+++..
T Consensus 19 ~~l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~-~~~~~~~~~~~~~~~~~~~~~~l~~-- 95 (217)
T cd05211 19 DSLEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELI-NYAVALGGSARVKVQDYFPGEAILG-- 95 (217)
T ss_pred CCcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHH-HHHHhhCCccccCcccccCccccee--
Confidence 578999999999999999999999999998899999886 555 3333333211 0 0111122222
Q ss_pred CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 308 ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 308 ~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
.++||+|-|+... +++.+....+ +-.+++.-+
T Consensus 96 ~~~DVlipaA~~~--~i~~~~a~~l--------~a~~V~e~A 127 (217)
T cd05211 96 LDVDIFAPCALGN--VIDLENAKKL--------KAKVVAEGA 127 (217)
T ss_pred ccccEEeeccccC--ccChhhHhhc--------CccEEEeCC
Confidence 3899999998865 5566655443 235666655
No 353
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.0073 Score=58.51 Aligned_cols=76 Identities=16% Similarity=0.290 Sum_probs=53.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC-cceee-----cccchHHhh-------cCC
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG-VEIIY-----KPLSEMLSC-------AAD 309 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~-~~~~~-----~~~~~~~~~-------l~~ 309 (513)
+.+++++|+|+ |.+|..+++.|...|++ |++++|++++...+.+.+.. ..+.+ ...+++.+. ...
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYK-VAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46789999998 99999999999999985 99999999887777666531 01111 111222222 247
Q ss_pred CcEEEEcCCCC
Q 010322 310 ADVVFTSTASE 320 (513)
Q Consensus 310 aDVVI~AT~s~ 320 (513)
+|+||.+.+..
T Consensus 83 ~d~vi~~ag~~ 93 (237)
T PRK07326 83 LDVLIANAGVG 93 (237)
T ss_pred CCEEEECCCCC
Confidence 89999997654
No 354
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=96.60 E-value=0.012 Score=59.88 Aligned_cols=146 Identities=14% Similarity=0.084 Sum_probs=82.4
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHH-HHHHhhCcccc--ccccc--cCCCchH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLF-KHAISVGKRVR--TETNI--AAGAVSV 227 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf-~~ai~v~k~Vr--~et~i--~~~~~Sv 227 (513)
..|+|+++.+..++.+ .+.+|+....- +....+..--- ...+.++..+. ..... ...+..+
T Consensus 67 ~~g~e~~G~V~~~G~~--~~~~Gd~V~~~------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~t 132 (329)
T cd05288 67 PMRGGGVGEVVESRSP--DFKVGDLVSGF------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLT 132 (329)
T ss_pred cccCceEEEEEecCCC--CCCCCCEEecc------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHH
Confidence 4688999999888754 67788877642 01111111000 12233333321 01111 1122333
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc--hH-
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS--EM- 303 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~--~~- 303 (513)
++.++... . ....+.+|+|.|+ |.+|.++++.++..|+ +|+++.++.++...+.+.++.. .+.... +.
T Consensus 133 a~~~l~~~---~--~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~ 204 (329)
T cd05288 133 AYFGLTEI---G--KPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFD--AAINYKTPDLA 204 (329)
T ss_pred HHHHHHhc---c--CCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCc--eEEecCChhHH
Confidence 44433211 1 1236899999995 9999999999999998 4888889888874443336632 111111 11
Q ss_pred ---Hhhc-CCCcEEEEcCCCC
Q 010322 304 ---LSCA-ADADVVFTSTASE 320 (513)
Q Consensus 304 ---~~~l-~~aDVVI~AT~s~ 320 (513)
.... .+.|++|+|++..
T Consensus 205 ~~v~~~~~~~~d~vi~~~g~~ 225 (329)
T cd05288 205 EALKEAAPDGIDVYFDNVGGE 225 (329)
T ss_pred HHHHHhccCCceEEEEcchHH
Confidence 1111 4699999999864
No 355
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.01 Score=58.41 Aligned_cols=77 Identities=19% Similarity=0.311 Sum_probs=55.5
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceee--ccc---chHHh-------hcCC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIY--KPL---SEMLS-------CAAD 309 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~--~~~---~~~~~-------~l~~ 309 (513)
.+++++++|+|+ |.+|+.+++.|...|+. |++++|+.+..+.+.+.++...+.+ .++ +++.. .+.+
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGAR-VHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG 86 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 578999999999 99999999999999985 9999999887777766553211111 111 12222 2347
Q ss_pred CcEEEEcCCCC
Q 010322 310 ADVVFTSTASE 320 (513)
Q Consensus 310 aDVVI~AT~s~ 320 (513)
.|+||.+.+..
T Consensus 87 ~d~vi~~ag~~ 97 (264)
T PRK12829 87 LDVLVNNAGIA 97 (264)
T ss_pred CCEEEECCCCC
Confidence 89999998764
No 356
>PLN02712 arogenate dehydrogenase
Probab=96.59 E-value=0.0057 Score=69.41 Aligned_cols=95 Identities=18% Similarity=0.336 Sum_probs=61.9
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcC-CCcEEEEcCCCC
Q 010322 242 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAA-DADVVFTSTASE 320 (513)
Q Consensus 242 ~~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~-~aDVVI~AT~s~ 320 (513)
.++.+++|+|||+|.||..+++.|...|. +|++++|+... +.+.++|. . ...+..+.+. .+|+||.||+..
T Consensus 365 ~~~~~~kIgIIGlG~mG~slA~~L~~~G~-~V~~~dr~~~~--~~a~~~Gv---~--~~~~~~el~~~~aDvVILavP~~ 436 (667)
T PLN02712 365 NDGSKLKIAIVGFGNFGQFLAKTMVKQGH-TVLAYSRSDYS--DEAQKLGV---S--YFSDADDLCEEHPEVILLCTSIL 436 (667)
T ss_pred CCCCCCEEEEEecCHHHHHHHHHHHHCcC-EEEEEECChHH--HHHHHcCC---e--EeCCHHHHHhcCCCEEEECCChH
Confidence 34577999999999999999999999987 59999998643 33445553 1 1234444443 589999999954
Q ss_pred ccCCChhhhhcCCchhhhcCCcEEEEecc
Q 010322 321 APLFLKDHVQDLPPVEAAVGGLRLFIDIS 349 (513)
Q Consensus 321 ~~vi~~~~l~~~~~~~~~~~g~~viiDla 349 (513)
. + .+.+..+.... .....+++|++
T Consensus 437 ~-~--~~vi~~l~~~~--lk~g~ivvDv~ 460 (667)
T PLN02712 437 S-T--EKVLKSLPFQR--LKRSTLFVDVL 460 (667)
T ss_pred H-H--HHHHHHHHHhc--CCCCcEEEECC
Confidence 2 2 23333221100 01236888984
No 357
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.57 E-value=0.01 Score=60.49 Aligned_cols=91 Identities=19% Similarity=0.346 Sum_probs=65.2
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHc----CCCeEEEEeCCHHHHHHHHHHhCCcceeecccch
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAK----GCTKMVVVNRSEERVAAICEELNGVEIIYKPLSE 302 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~----G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~ 302 (513)
+.+.+++.+.. + .++.|++|+|||. .-+|+-++..|... ++ .|+++...- .+
T Consensus 141 p~av~~lL~~~-~-i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~a-TVtvchs~T--------------------~n 197 (293)
T PRK14185 141 PNGILELLKRY-H-IETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDC-TVTVCHSRS--------------------KN 197 (293)
T ss_pred HHHHHHHHHHh-C-CCCCCCEEEEECCCccchHHHHHHHHcCCCCCCC-EEEEecCCC--------------------CC
Confidence 34445665432 2 4689999999999 67899999999887 45 488875421 12
Q ss_pred HHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 303 MLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 303 ~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
+.+.+..||+||+|+|.|.. ++.++++. | .++||.++-+
T Consensus 198 l~~~~~~ADIvIsAvGkp~~-i~~~~vk~---------g-avVIDvGin~ 236 (293)
T PRK14185 198 LKKECLEADIIIAALGQPEF-VKADMVKE---------G-AVVIDVGTTR 236 (293)
T ss_pred HHHHHhhCCEEEEccCCcCc-cCHHHcCC---------C-CEEEEecCcc
Confidence 34455789999999999986 57777743 2 6899998644
No 358
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.0088 Score=58.19 Aligned_cols=77 Identities=16% Similarity=0.226 Sum_probs=55.3
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCccee--ecccchHHhh---cCCCcEEEEc
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEII--YKPLSEMLSC---AADADVVFTS 316 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~--~~~~~~~~~~---l~~aDVVI~A 316 (513)
++.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++.+.+.+..+...+. +...+++.+. ....|+||.+
T Consensus 6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ 84 (245)
T PRK07060 6 DFSGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC 84 (245)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence 357899999998 8999999999999998 5999999998887777665421111 1111222222 2358999999
Q ss_pred CCCC
Q 010322 317 TASE 320 (513)
Q Consensus 317 T~s~ 320 (513)
.+..
T Consensus 85 ag~~ 88 (245)
T PRK07060 85 AGIA 88 (245)
T ss_pred CCCC
Confidence 8764
No 359
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.56 E-value=0.0084 Score=65.67 Aligned_cols=73 Identities=25% Similarity=0.266 Sum_probs=54.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
+.|++|+|+|.|..|.++++.|...|+ +|+++|+.+.+... ++++|. .+.......+.+.++|+||.+.|.|.
T Consensus 10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~-l~~~g~---~~~~~~~~~~~l~~~D~VV~SpGi~~ 82 (488)
T PRK03369 10 LPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRP-HAERGV---ATVSTSDAVQQIADYALVVTSPGFRP 82 (488)
T ss_pred cCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHH-HHhCCC---EEEcCcchHhHhhcCCEEEECCCCCC
Confidence 478999999999999999999999998 59999988766544 344442 23222223344678999999988863
No 360
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.55 E-value=0.0059 Score=60.49 Aligned_cols=75 Identities=15% Similarity=0.296 Sum_probs=53.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc-c-e--eecccchHHh-------hcCCCc
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV-E-I--IYKPLSEMLS-------CAADAD 311 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~-~-~--~~~~~~~~~~-------~l~~aD 311 (513)
+.+++++|+|+ |++|..+++.|...|++ |++++|+.++++++....+.. . + .+...++..+ .+...|
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGAR-VAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKID 81 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence 56899999998 89999999999999985 999999988887776654321 0 1 1111122222 234679
Q ss_pred EEEEcCCC
Q 010322 312 VVFTSTAS 319 (513)
Q Consensus 312 VVI~AT~s 319 (513)
++|++.+.
T Consensus 82 ~li~~Ag~ 89 (262)
T TIGR03325 82 CLIPNAGI 89 (262)
T ss_pred EEEECCCC
Confidence 99999764
No 361
>PRK06196 oxidoreductase; Provisional
Probab=96.55 E-value=0.014 Score=59.80 Aligned_cols=77 Identities=16% Similarity=0.271 Sum_probs=54.8
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcce---eecccchHHhh-------cCCCc
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEI---IYKPLSEMLSC-------AADAD 311 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~---~~~~~~~~~~~-------l~~aD 311 (513)
++.+++|+|.|+ |.+|..+++.|...|++ |++++|+.++.+++..++..... .+...+++.+. ....|
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~-Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQAGAH-VIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCC
Confidence 467899999999 99999999999999985 99999999888776665432111 11112222221 24689
Q ss_pred EEEEcCCCC
Q 010322 312 VVFTSTASE 320 (513)
Q Consensus 312 VVI~AT~s~ 320 (513)
+||++.+..
T Consensus 102 ~li~nAg~~ 110 (315)
T PRK06196 102 ILINNAGVM 110 (315)
T ss_pred EEEECCCCC
Confidence 999998753
No 362
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.54 E-value=0.0078 Score=61.96 Aligned_cols=72 Identities=18% Similarity=0.323 Sum_probs=52.5
Q ss_pred eEEEEcccHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhCCcc-----eeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGC-TKMVVVNRSEERVAAICEELNGVE-----IIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~-~~V~v~nRs~~ra~~la~~~g~~~-----~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
+|.|||+|.+|..++..|...|. .+|.++|++.+++...+..+.... ..+. ..+ .+.+.++|+||.|.+.+.
T Consensus 2 kI~IIGaG~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~-~~d-~~~l~~aDiViita~~~~ 79 (308)
T cd05292 2 KVAIVGAGFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY-AGD-YADCKGADVVVITAGANQ 79 (308)
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe-eCC-HHHhCCCCEEEEccCCCC
Confidence 69999999999999999999984 679999999887754444332110 0111 123 345789999999998863
No 363
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.54 E-value=0.011 Score=60.41 Aligned_cols=91 Identities=18% Similarity=0.346 Sum_probs=64.9
Q ss_pred HHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHH----cCCCeEEEEeCCHHHHHHHHHHhCCcceeecccch
Q 010322 228 SSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVA----KGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSE 302 (513)
Q Consensus 228 a~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~----~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~ 302 (513)
+.+.+++.+.. + -++.|++|+|||. .-+|+-++..|.. .|+ .|+++..+.. +
T Consensus 143 p~ail~ll~~y-~-i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~a-tVt~~hs~t~--------------------~ 199 (295)
T PRK14174 143 PYGILELLGRY-N-IETKGKHCVVVGRSNIVGKPMANLMLQKLKESNC-TVTICHSATK--------------------D 199 (295)
T ss_pred HHHHHHHHHHh-C-CCCCCCEEEEECCCCcchHHHHHHHHhccccCCC-EEEEEeCCch--------------------h
Confidence 33445665532 2 4689999999999 6678988888876 466 4777775421 2
Q ss_pred HHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 303 MLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 303 ~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
+.+.+..||+||.|+|.+ .+|+.++++. | .++||.++-+
T Consensus 200 l~~~~~~ADIvI~Avg~~-~li~~~~vk~---------G-avVIDVgi~~ 238 (295)
T PRK14174 200 IPSYTRQADILIAAIGKA-RFITADMVKP---------G-AVVIDVGINR 238 (295)
T ss_pred HHHHHHhCCEEEEecCcc-CccCHHHcCC---------C-CEEEEeeccc
Confidence 344467899999999999 5678888732 3 6899998644
No 364
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=96.54 E-value=0.0075 Score=61.36 Aligned_cols=71 Identities=21% Similarity=0.294 Sum_probs=50.4
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc------ceeec--ccchHHhhcCCCcEEEEcCCC
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV------EIIYK--PLSEMLSCAADADVVFTSTAS 319 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~------~~~~~--~~~~~~~~l~~aDVVI~AT~s 319 (513)
+|+|||+|.||..++..|...|. +|++++| .++.+.+.+ .+.. ...+. ...+..+....+|+||.|+++
T Consensus 2 kI~IiG~G~iG~~~a~~L~~~g~-~V~~~~r-~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~ 78 (305)
T PRK12921 2 RIAVVGAGAVGGTFGGRLLEAGR-DVTFLVR-PKRAKALRE-RGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKA 78 (305)
T ss_pred eEEEECCCHHHHHHHHHHHHCCC-ceEEEec-HHHHHHHHh-CCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEecc
Confidence 69999999999999999999987 4999999 777766654 2210 00000 112334445789999999998
Q ss_pred Cc
Q 010322 320 EA 321 (513)
Q Consensus 320 ~~ 321 (513)
..
T Consensus 79 ~~ 80 (305)
T PRK12921 79 YQ 80 (305)
T ss_pred cC
Confidence 64
No 365
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.0085 Score=62.23 Aligned_cols=76 Identities=20% Similarity=0.338 Sum_probs=55.5
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh---CCcceeec--c---cchHHhh-------
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL---NGVEIIYK--P---LSEMLSC------- 306 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~---g~~~~~~~--~---~~~~~~~------- 306 (513)
.+.+++|+|.|+ |++|+.+++.|...|++ |++++|+.++++++.+++ +. .+.+. + .+++.+.
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~-Vvl~~R~~~~l~~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGAR-LVLAARDEEALQAVAEECRALGA-EVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 467899999999 99999999999999985 999999999887776654 22 11111 1 1222222
Q ss_pred cCCCcEEEEcCCCC
Q 010322 307 AADADVVFTSTASE 320 (513)
Q Consensus 307 l~~aDVVI~AT~s~ 320 (513)
....|++|++.+..
T Consensus 82 ~g~iD~lVnnAG~~ 95 (330)
T PRK06139 82 GGRIDVWVNNVGVG 95 (330)
T ss_pred cCCCCEEEECCCcC
Confidence 25689999998764
No 366
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.53 E-value=0.0071 Score=59.53 Aligned_cols=77 Identities=18% Similarity=0.302 Sum_probs=54.0
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc--ceeec--cc---chHHhh-------c
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV--EIIYK--PL---SEMLSC-------A 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~--~~~~~--~~---~~~~~~-------l 307 (513)
++.+++|+|.|+ |.+|+.+++.|.+.|++ |++++|+.++..++.+.+... .+.+. +. +++.+. .
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAE-VILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 567999999998 99999999999999984 999999988776665554311 11111 11 122222 3
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|+||.+.+..
T Consensus 86 ~~~d~li~~ag~~ 98 (255)
T PRK07523 86 GPIDILVNNAGMQ 98 (255)
T ss_pred CCCCEEEECCCCC
Confidence 4689999998754
No 367
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.0064 Score=60.37 Aligned_cols=75 Identities=19% Similarity=0.271 Sum_probs=55.1
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeec-----ccchHHhh-------cCC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYK-----PLSEMLSC-------AAD 309 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~-----~~~~~~~~-------l~~ 309 (513)
++.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.++.+++.+.++.. +.+. ..+++.+. ...
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGER-ARFIATDITDDAAIERAVATVVARFGR 80 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCe-eEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 467899999998 9999999999999998 5999999988887777776421 1111 11222222 246
Q ss_pred CcEEEEcCCC
Q 010322 310 ADVVFTSTAS 319 (513)
Q Consensus 310 aDVVI~AT~s 319 (513)
.|++|.+.+.
T Consensus 81 id~lv~~ag~ 90 (261)
T PRK08265 81 VDILVNLACT 90 (261)
T ss_pred CCEEEECCCC
Confidence 7999998775
No 368
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.52 E-value=0.01 Score=60.31 Aligned_cols=92 Identities=21% Similarity=0.290 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHH----cCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVA----KGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS 301 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~----~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~ 301 (513)
++.+.+++.+.. + -++.|++|+|||- .-+|+-++..|.. .|++ |+++..+. .
T Consensus 140 Tp~av~~lL~~~-~-i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~At-Vt~~hs~t--------------------~ 196 (286)
T PRK14184 140 TPAGVMTLLERY-G-LSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANAT-VTVCHSRT--------------------P 196 (286)
T ss_pred CHHHHHHHHHHh-C-CCCCCCEEEEECCCccchHHHHHHHhCCcccCCCE-EEEEeCCc--------------------h
Confidence 334445665442 2 4789999999999 6789999999987 6774 77776432 1
Q ss_pred hHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 302 EMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 302 ~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
++.+.+..||+||.|++.|.. ++.++++. | .++||.++-+
T Consensus 197 ~l~~~~~~ADIVI~AvG~p~l-i~~~~vk~---------G-avVIDVGi~~ 236 (286)
T PRK14184 197 DLAEECREADFLFVAIGRPRF-VTADMVKP---------G-AVVVDVGINR 236 (286)
T ss_pred hHHHHHHhCCEEEEecCCCCc-CCHHHcCC---------C-CEEEEeeeec
Confidence 234456789999999999876 67777732 3 6899998644
No 369
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.52 E-value=0.012 Score=60.21 Aligned_cols=92 Identities=17% Similarity=0.279 Sum_probs=66.0
Q ss_pred HHHHHHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHc----CCCeEEEEeCCHHHHHHHHHHhCCcceeecccc
Q 010322 227 VSSAAVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAK----GCTKMVVVNRSEERVAAICEELNGVEIIYKPLS 301 (513)
Q Consensus 227 va~~Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~----G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~ 301 (513)
++.+.+++.+. ++ -++.|++|+|||- .-+|+-++..|... ++ .|+++...- .
T Consensus 140 Tp~avi~lL~~-~~-i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~a-TVtvchs~T--------------------~ 196 (297)
T PRK14167 140 TPHGIQKLLAA-AG-VDTEGADVVVVGRSDIVGKPMANLLIQKADGGNA-TVTVCHSRT--------------------D 196 (297)
T ss_pred CHHHHHHHHHH-hC-CCCCCCEEEEECCCcccHHHHHHHHhcCccCCCC-EEEEeCCCC--------------------C
Confidence 44445566543 22 4689999999999 67899999999877 56 488875421 1
Q ss_pred hHHhhcCCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 302 EMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 302 ~~~~~l~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
++.+.+..|||||+|+|-|.. ++.++++. | .++||.++-+
T Consensus 197 ~l~~~~~~ADIvIsAvGkp~~-i~~~~ik~---------g-aiVIDvGin~ 236 (297)
T PRK14167 197 DLAAKTRRADIVVAAAGVPEL-IDGSMLSE---------G-ATVIDVGINR 236 (297)
T ss_pred CHHHHHhhCCEEEEccCCcCc-cCHHHcCC---------C-CEEEEccccc
Confidence 234456789999999999975 57777743 2 7899998644
No 370
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.016 Score=56.53 Aligned_cols=76 Identities=16% Similarity=0.272 Sum_probs=54.6
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeec-----ccchH-------HhhcCC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYK-----PLSEM-------LSCAAD 309 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~-----~~~~~-------~~~l~~ 309 (513)
.+.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.++..++.++++.. ..+. ..++. .+....
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGES-ALVIRADAGDVAAQKALAQALAEAFGR 80 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCc-eEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 356899999998 9999999999999998 5999999988777776666531 1111 11111 122346
Q ss_pred CcEEEEcCCCC
Q 010322 310 ADVVFTSTASE 320 (513)
Q Consensus 310 aDVVI~AT~s~ 320 (513)
.|+||.+.+..
T Consensus 81 id~vi~~ag~~ 91 (249)
T PRK06500 81 LDAVFINAGVA 91 (249)
T ss_pred CCEEEECCCCC
Confidence 89999998754
No 371
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=96.49 E-value=0.013 Score=59.63 Aligned_cols=168 Identities=17% Similarity=0.161 Sum_probs=92.8
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCc--------cccccccccCC-
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGK--------RVRTETNIAAG- 223 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k--------~Vr~et~i~~~- 223 (513)
..|+|+++.+.. .|.+.+.+|++...... . .|...++.|++++.++. .+..+......
T Consensus 59 ~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~--------~---~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~ 125 (323)
T TIGR02823 59 IPGIDAAGTVVS--SEDPRFREGDEVIVTGY--------G---LGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGT 125 (323)
T ss_pred cceeeeEEEEEe--cCCCCCCCCCEEEEccC--------C---CCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhh
Confidence 359999999877 67778889998875321 0 11111333444333333 22222111110
Q ss_pred CchHHHHHHHHHHhhCCCCCCCCC-eEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc
Q 010322 224 AVSVSSAAVELALMKLPESSHATA-RMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS 301 (513)
Q Consensus 224 ~~Sva~~Av~la~~~~~~~~l~g~-~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~ 301 (513)
+...++.++..... . ....|. +|+|.|+ |.+|.++++.++..|++ ++++.++.++. ++++++|.. .+....
T Consensus 126 ~~~ta~~~~~~~~~-~--~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~-vi~~~~~~~~~-~~~~~~g~~--~~~~~~ 198 (323)
T TIGR02823 126 AGFTAALSVMALER-N--GLTPEDGPVLVTGATGGVGSLAVAILSKLGYE-VVASTGKAEEE-DYLKELGAS--EVIDRE 198 (323)
T ss_pred hHHHHHHHHHHhhh-c--CCCCCCceEEEEcCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHH-HHHHhcCCc--EEEccc
Confidence 11112222221111 1 123577 9999998 99999999999999986 66666777776 555777642 122222
Q ss_pred h----HHhhc-CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 302 E----MLSCA-ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 302 ~----~~~~l-~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
+ ..... .++|++++|++.. .+ .+.+..+. ++|..+.++.
T Consensus 199 ~~~~~~~~~~~~~~d~vld~~g~~-~~--~~~~~~l~-----~~G~~v~~g~ 242 (323)
T TIGR02823 199 DLSPPGKPLEKERWAGAVDTVGGH-TL--ANVLAQLK-----YGGAVAACGL 242 (323)
T ss_pred cHHHHHHHhcCCCceEEEECccHH-HH--HHHHHHhC-----CCCEEEEEcc
Confidence 1 11111 2589999999864 22 34454443 3565655553
No 372
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=96.48 E-value=0.026 Score=56.13 Aligned_cols=154 Identities=14% Similarity=0.135 Sum_probs=84.0
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccC-CCchHHHH
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAA-GAVSVSSA 230 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~-~~~Sva~~ 230 (513)
...|+|+++.+..++++++..-+|+.......- ...+....+...-....+.++..+........ -+...++.
T Consensus 61 ~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~ 134 (309)
T cd05289 61 LIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPF------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQ 134 (309)
T ss_pred CccccceeEEEEeeCCCCCCCCCCCEEEEccCC------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHH
Confidence 357999999999999999888889876532100 00011111111101122223322211111110 01122233
Q ss_pred HHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc-hHH--hh
Q 010322 231 AVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS-EML--SC 306 (513)
Q Consensus 231 Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~-~~~--~~ 306 (513)
++... . ....+.+|+|.|+ |.+|.+++..+...|+. |+++.++. +. .++..++.. ..+.... +.. ..
T Consensus 135 ~~~~~----~-~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~-v~~~~~~~-~~-~~~~~~g~~-~~~~~~~~~~~~~~~ 205 (309)
T cd05289 135 ALFEL----G-GLKAGQTVLIHGAAGGVGSFAVQLAKARGAR-VIATASAA-NA-DFLRSLGAD-EVIDYTKGDFERAAA 205 (309)
T ss_pred HHHhh----c-CCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecch-hH-HHHHHcCCC-EEEeCCCCchhhccC
Confidence 32211 1 1346899999997 99999999999999986 77777666 54 555666631 1111111 111 11
Q ss_pred cCCCcEEEEcCCCC
Q 010322 307 AADADVVFTSTASE 320 (513)
Q Consensus 307 l~~aDVVI~AT~s~ 320 (513)
-.++|++|+|++++
T Consensus 206 ~~~~d~v~~~~~~~ 219 (309)
T cd05289 206 PGGVDAVLDTVGGE 219 (309)
T ss_pred CCCceEEEECCchH
Confidence 23689999999886
No 373
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=96.48 E-value=0.031 Score=56.08 Aligned_cols=152 Identities=14% Similarity=0.169 Sum_probs=86.9
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccc-cCCCchHHHH
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNI-AAGAVSVSSA 230 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i-~~~~~Sva~~ 230 (513)
...|||+++.+..+++.+..+-+|+.....- ..+....+...--...+.++..+...... ...+...++.
T Consensus 59 ~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~---------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~ 129 (325)
T TIGR02824 59 DILGLEVAGEVVAVGEGVSRWKVGDRVCALV---------AGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWS 129 (325)
T ss_pred CCccceeEEEEEEeCCCCCCCCCCCEEEEcc---------CCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHH
Confidence 3579999999999999888788898776420 00122221111111222233222111110 0112223333
Q ss_pred HHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc-ch----HH
Q 010322 231 AVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL-SE----ML 304 (513)
Q Consensus 231 Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~-~~----~~ 304 (513)
++.. .. ....+.+|+|.|+ |.+|.+++..+...|++ |+++.++.++.+ ++..++.. ..+... .+ +.
T Consensus 130 ~~~~---~~--~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~-~~~~~g~~-~~~~~~~~~~~~~~~ 201 (325)
T TIGR02824 130 NLFQ---RG--GLKAGETVLIHGGASGIGTTAIQLAKAFGAR-VFTTAGSDEKCA-ACEALGAD-IAINYREEDFVEVVK 201 (325)
T ss_pred HHHH---hc--CCCCCCEEEEEcCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHH-HHHHcCCc-EEEecCchhHHHHHH
Confidence 3211 11 2346899999996 99999999999999985 888999988874 55666531 111111 11 11
Q ss_pred hhc--CCCcEEEEcCCCC
Q 010322 305 SCA--ADADVVFTSTASE 320 (513)
Q Consensus 305 ~~l--~~aDVVI~AT~s~ 320 (513)
... .+.|++|++++..
T Consensus 202 ~~~~~~~~d~~i~~~~~~ 219 (325)
T TIGR02824 202 AETGGKGVDVILDIVGGS 219 (325)
T ss_pred HHcCCCCeEEEEECCchH
Confidence 222 3599999998864
No 374
>PRK05717 oxidoreductase; Validated
Probab=96.46 E-value=0.0079 Score=59.28 Aligned_cols=76 Identities=20% Similarity=0.267 Sum_probs=54.1
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeec-----ccchHHh-------hcCC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYK-----PLSEMLS-------CAAD 309 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~-----~~~~~~~-------~l~~ 309 (513)
.+.|++++|.|+ |.+|+.+++.|...|+ +|++++|+..+..++.+.++.. +.+. ..+++.+ ....
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~-~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGEN-AWFIAMDVADEAQVAAGVAEVLGQFGR 84 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCc-eEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 578999999998 9999999999999998 5899999887776766655421 1111 1112211 1235
Q ss_pred CcEEEEcCCCC
Q 010322 310 ADVVFTSTASE 320 (513)
Q Consensus 310 aDVVI~AT~s~ 320 (513)
.|+||.+.+..
T Consensus 85 id~li~~ag~~ 95 (255)
T PRK05717 85 LDALVCNAAIA 95 (255)
T ss_pred CCEEEECCCcc
Confidence 79999998754
No 375
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.46 E-value=0.011 Score=58.52 Aligned_cols=76 Identities=14% Similarity=0.272 Sum_probs=54.8
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc-c-e--eecccchHHhh-------cCCC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV-E-I--IYKPLSEMLSC-------AADA 310 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~-~-~--~~~~~~~~~~~-------l~~a 310 (513)
.+.+++++|.|+ |.+|..+++.|...|++ |++++|+.++++.+.+.++.. . + .+...++.... ....
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGAR-VAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 357899999998 89999999999999985 999999998888877766421 0 1 11111222221 3468
Q ss_pred cEEEEcCCC
Q 010322 311 DVVFTSTAS 319 (513)
Q Consensus 311 DVVI~AT~s 319 (513)
|++|++.+.
T Consensus 82 d~li~~ag~ 90 (263)
T PRK06200 82 DCFVGNAGI 90 (263)
T ss_pred CEEEECCCC
Confidence 999999875
No 376
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.012 Score=58.56 Aligned_cols=77 Identities=18% Similarity=0.327 Sum_probs=54.3
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC---Ccceee-----cccchHHhh------c
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN---GVEIIY-----KPLSEMLSC------A 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g---~~~~~~-----~~~~~~~~~------l 307 (513)
++.|++++|.|+ |++|+.+++.|...|++ |++++|+.++++++++++. +..+.+ ...+++... .
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARAGAD-VILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNI 83 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhh
Confidence 467999999998 89999999999999985 9999999888777666542 111111 111222222 2
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|++|++.+..
T Consensus 84 g~iD~lv~nag~~ 96 (263)
T PRK08339 84 GEPDIFFFSTGGP 96 (263)
T ss_pred CCCcEEEECCCCC
Confidence 3589999988754
No 377
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.009 Score=58.36 Aligned_cols=76 Identities=18% Similarity=0.272 Sum_probs=53.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC-Ccceeec-----ccchHHhh-------cCC
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN-GVEIIYK-----PLSEMLSC-------AAD 309 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g-~~~~~~~-----~~~~~~~~-------l~~ 309 (513)
+.+++++|.|+ |.+|..+++.|...|++ |+++.|+.+......+.+. +..+.+. ..+++.+. ...
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGAR-VVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR 81 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCe-EEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999 99999999999999984 9999999887766555441 1111111 11222222 247
Q ss_pred CcEEEEcCCCC
Q 010322 310 ADVVFTSTASE 320 (513)
Q Consensus 310 aDVVI~AT~s~ 320 (513)
.|+||.+.+..
T Consensus 82 id~vi~~ag~~ 92 (252)
T PRK06138 82 LDVLVNNAGFG 92 (252)
T ss_pred CCEEEECCCCC
Confidence 89999998864
No 378
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=96.44 E-value=0.02 Score=56.94 Aligned_cols=151 Identities=13% Similarity=0.158 Sum_probs=87.4
Q ss_pred hcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCcccccccccc-CCCchHHHHH
Q 010322 153 LYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIA-AGAVSVSSAA 231 (513)
Q Consensus 153 ~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~-~~~~Sva~~A 231 (513)
..|+|+++.+..+++++..+-+|+..+.-.- ...|....+...--...+.++..+..+.... ..+...++.+
T Consensus 40 ~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~ 112 (303)
T cd08251 40 TPGFEASGVVRAVGPHVTRLAVGDEVIAGTG-------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDA 112 (303)
T ss_pred CcCceeeEEEEEECCCCCCCCCCCEEEEecC-------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHH
Confidence 4699999999999999988888998764210 0112222111111122333333332222111 1123334444
Q ss_pred HHHHHhhCCCCCCCCCeEEEEc-ccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc-h----HHh
Q 010322 232 VELALMKLPESSHATARMLVIG-AGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS-E----MLS 305 (513)
Q Consensus 232 v~la~~~~~~~~l~g~~VlVIG-aG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~-~----~~~ 305 (513)
+..+ ....|.+|+|.| +|.+|.++++.++..|++ |+++.++.++.+. +..+|... .+.... + +..
T Consensus 113 l~~~------~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~-~~~~g~~~-~~~~~~~~~~~~i~~ 183 (303)
T cd08251 113 FARA------GLAKGEHILIQTATGGTGLMAVQLARLKGAE-IYATASSDDKLEY-LKQLGVPH-VINYVEEDFEEEIMR 183 (303)
T ss_pred HHhc------CCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEcCCHHHHHH-HHHcCCCE-EEeCCCccHHHHHHH
Confidence 4321 234688999976 599999999999999985 8888888777744 46676421 121111 1 112
Q ss_pred hc--CCCcEEEEcCCC
Q 010322 306 CA--ADADVVFTSTAS 319 (513)
Q Consensus 306 ~l--~~aDVVI~AT~s 319 (513)
.. .++|+++++++.
T Consensus 184 ~~~~~~~d~v~~~~~~ 199 (303)
T cd08251 184 LTGGRGVDVVINTLSG 199 (303)
T ss_pred HcCCCCceEEEECCcH
Confidence 22 369999999864
No 379
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=96.44 E-value=0.019 Score=63.02 Aligned_cols=122 Identities=15% Similarity=0.153 Sum_probs=80.9
Q ss_pred CCchHHHHHHHHHHhhCCCCCCCCCeEEEEcccHHHHHHHHHHHH----cCC------CeEEEEeCC----HHH------
Q 010322 223 GAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVA----KGC------TKMVVVNRS----EER------ 282 (513)
Q Consensus 223 ~~~Sva~~Av~la~~~~~~~~l~g~~VlVIGaG~mG~~ia~~L~~----~G~------~~V~v~nRs----~~r------ 282 (513)
++.+|+.+++--|-+..+ ..+.+.+|+++|||..|..++..|.. .|. ++|+++|+. .+|
T Consensus 275 GTaaV~lAgll~Alr~~g-~~l~d~riv~~GAGsAgiGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~ 353 (559)
T PTZ00317 275 GTGAVIAAGFLNALKLSG-VPPEEQRIVFFGAGSAAIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAK 353 (559)
T ss_pred hHHHHHHHHHHHHHHHhC-CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccH
Confidence 455666666544444333 56889999999999999999998874 688 789998863 111
Q ss_pred -HHHHHHHhCCcceeecccchHHhhcCCC--cEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 283 -VAAICEELNGVEIIYKPLSEMLSCAADA--DVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 283 -a~~la~~~g~~~~~~~~~~~~~~~l~~a--DVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
...+|+.-.. .......++.++++.+ ||+|-+++.+ ..|+++.++.+.+ ...+.+++-||.|-
T Consensus 354 ~k~~fa~~~~~--~~~~~~~~L~e~v~~~KPtvLIG~S~~~-g~Ft~evv~~Ma~----~~~rPIIFaLSNPt 419 (559)
T PTZ00317 354 HKVPFARTDIS--AEDSSLKTLEDVVRFVKPTALLGLSGVG-GVFTEEVVKTMAS----NVERPIIFPLSNPT 419 (559)
T ss_pred HHHHHhccccc--cccccCCCHHHHHhccCCCEEEEecCCC-CCCCHHHHHHHHh----cCCCCEEEECCCCC
Confidence 1233332100 0000134678888877 9999988766 4678998887653 12457888899885
No 380
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=96.43 E-value=0.01 Score=60.40 Aligned_cols=77 Identities=18% Similarity=0.201 Sum_probs=52.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-------------------HHHHHHHHHhCCc--ceeecccc-
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-------------------ERVAAICEELNGV--EIIYKPLS- 301 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-------------------~ra~~la~~~g~~--~~~~~~~~- 301 (513)
+...+|+|+|+|++|..++++|...|+++|+++|... .|++..++++... .+.+....
T Consensus 17 L~~s~VLIvG~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~ 96 (286)
T cd01491 17 LQKSNVLISGLGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVSTG 96 (286)
T ss_pred HhcCcEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEec
Confidence 4678999999999999999999999999999988642 2443333333211 12222222
Q ss_pred -hHHhhcCCCcEEEEcCCCC
Q 010322 302 -EMLSCAADADVVFTSTASE 320 (513)
Q Consensus 302 -~~~~~l~~aDVVI~AT~s~ 320 (513)
...+.+..+|+||.|+.+.
T Consensus 97 ~~~~~~l~~fdvVV~~~~~~ 116 (286)
T cd01491 97 PLTTDELLKFQVVVLTDASL 116 (286)
T ss_pred cCCHHHHhcCCEEEEecCCH
Confidence 1235578999999997653
No 381
>PRK06153 hypothetical protein; Provisional
Probab=96.43 E-value=0.0066 Score=63.92 Aligned_cols=79 Identities=13% Similarity=0.272 Sum_probs=53.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCC----------H------------HHHHHHHHHhCCc--ceeecc
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRS----------E------------ERVAAICEELNGV--EIIYKP 299 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs----------~------------~ra~~la~~~g~~--~~~~~~ 299 (513)
+.+.+|+|||+|+.|..++..|...|+.+|+++|.. . .|++.+++.+... .+...+
T Consensus 174 L~~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~in~~I~~~~ 253 (393)
T PRK06153 174 LEGQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNMRRGIVPHP 253 (393)
T ss_pred HhhCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHhCCeEEEEe
Confidence 478999999999999999999999999999987753 1 2444444444311 111111
Q ss_pred --c-chHHhhcCCCcEEEEcCCCCcc
Q 010322 300 --L-SEMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 300 --~-~~~~~~l~~aDVVI~AT~s~~~ 322 (513)
. .+-...+.++|+||.|+.....
T Consensus 254 ~~I~~~n~~~L~~~DiV~dcvDn~~a 279 (393)
T PRK06153 254 EYIDEDNVDELDGFTFVFVCVDKGSS 279 (393)
T ss_pred ecCCHHHHHHhcCCCEEEEcCCCHHH
Confidence 1 1222357899999999987653
No 382
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.01 Score=58.51 Aligned_cols=77 Identities=12% Similarity=0.215 Sum_probs=54.8
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC----cceeec--cc---chHHhh------
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG----VEIIYK--PL---SEMLSC------ 306 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~----~~~~~~--~~---~~~~~~------ 306 (513)
.+.+++++|.|+ |++|+.+++.|...|++ |++++|+.++.+++++++.. ..+.+. +. +++.+.
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAA-VALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE 82 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 467899999998 99999999999999985 99999998888777766521 111111 11 122222
Q ss_pred -cCCCcEEEEcCCCC
Q 010322 307 -AADADVVFTSTASE 320 (513)
Q Consensus 307 -l~~aDVVI~AT~s~ 320 (513)
....|++|.+.+..
T Consensus 83 ~~g~id~li~~ag~~ 97 (260)
T PRK07063 83 AFGPLDVLVNNAGIN 97 (260)
T ss_pred HhCCCcEEEECCCcC
Confidence 24689999998753
No 383
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.43 E-value=0.015 Score=58.40 Aligned_cols=177 Identities=14% Similarity=0.115 Sum_probs=95.2
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccc-cCCCchHHHH
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNI-AAGAVSVSSA 230 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i-~~~~~Sva~~ 230 (513)
...|||+++.+..+++++...-+|+....-... .....|..+.+..---...+.+++.+..+... ...+..+++.
T Consensus 59 ~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~----~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~ 134 (328)
T cd08268 59 ARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAA----DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYG 134 (328)
T ss_pred CCCCcceEEEEEeeCCCCCcCCCCCEEEecccc----ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHH
Confidence 357999999999999988777789877642100 00001111111100001122223222111110 1112333344
Q ss_pred HHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc-ch----HH
Q 010322 231 AVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL-SE----ML 304 (513)
Q Consensus 231 Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~-~~----~~ 304 (513)
++... . ....+.+|+|.|+ |.+|..++..+...|++ ++++.++.++...+ ..++.. ..+... .+ +.
T Consensus 135 ~~~~~---~--~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~-v~~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~~~~ 206 (328)
T cd08268 135 ALVEL---A--GLRPGDSVLITAASSSVGLAAIQIANAAGAT-VIATTRTSEKRDAL-LALGAA-HVIVTDEEDLVAEVL 206 (328)
T ss_pred HHHHh---c--CCCCCCEEEEecCccHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHH-HHcCCC-EEEecCCccHHHHHH
Confidence 33211 1 2346889999998 99999999999999985 88888888877554 556531 111111 11 22
Q ss_pred hhc--CCCcEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 305 SCA--ADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 305 ~~l--~~aDVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
... .++|++|++++++.. ...+..+. .+|..+.++.
T Consensus 207 ~~~~~~~~d~vi~~~~~~~~---~~~~~~l~-----~~g~~v~~g~ 244 (328)
T cd08268 207 RITGGKGVDVVFDPVGGPQF---AKLADALA-----PGGTLVVYGA 244 (328)
T ss_pred HHhCCCCceEEEECCchHhH---HHHHHhhc-----cCCEEEEEEe
Confidence 222 269999999887421 23344332 3565555553
No 384
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.012 Score=56.62 Aligned_cols=77 Identities=12% Similarity=0.174 Sum_probs=51.8
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCccee-----ecccchHHhh-------cCC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEII-----YKPLSEMLSC-------AAD 309 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~-----~~~~~~~~~~-------l~~ 309 (513)
.+.+++++|+|+ |.+|+.+++.|...|++ |++++|++.+..+....+...... +...+++... ..+
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGAR-VALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCe-EEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 467899999998 99999999999999985 999999887654444333211111 1112222222 236
Q ss_pred CcEEEEcCCCC
Q 010322 310 ADVVFTSTASE 320 (513)
Q Consensus 310 aDVVI~AT~s~ 320 (513)
.|+||.+.+..
T Consensus 83 ~d~vi~~ag~~ 93 (239)
T PRK12828 83 LDALVNIAGAF 93 (239)
T ss_pred cCEEEECCccc
Confidence 89999987653
No 385
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=96.39 E-value=0.0082 Score=61.58 Aligned_cols=72 Identities=29% Similarity=0.403 Sum_probs=54.0
Q ss_pred EEEEcccHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhCCcc-----eeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 249 MLVIGAGKMGKLVIKHLVAKGC-TKMVVVNRSEERVAAICEELNGVE-----IIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 249 VlVIGaG~mG~~ia~~L~~~G~-~~V~v~nRs~~ra~~la~~~g~~~-----~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
|.|||+|.+|..++..|...|. .+++++|++.+++...+..+.... ..+....+ .+.+.++|+||.|.+.|.
T Consensus 1 i~iiGaG~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~p~ 78 (300)
T cd00300 1 ITIIGAGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGAPR 78 (300)
T ss_pred CEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCCCC
Confidence 5799999999999999998885 579999999988877776654210 11111233 457889999999998864
No 386
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.37 E-value=0.018 Score=56.71 Aligned_cols=77 Identities=17% Similarity=0.258 Sum_probs=54.7
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceee--ccc---chHHh-------hc
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIY--KPL---SEMLS-------CA 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~--~~~---~~~~~-------~l 307 (513)
++.+++++|.|+ |++|..+++.|...|++ |++++|+.++.+.+.+++.. ..... .+. +++.+ ..
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQ-VAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 467899999999 99999999999999985 99999999888777766521 11111 111 12222 23
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|++|.+.+..
T Consensus 85 g~id~lv~~ag~~ 97 (253)
T PRK05867 85 GGIDIAVCNAGII 97 (253)
T ss_pred CCCCEEEECCCCC
Confidence 4789999987653
No 387
>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]
Probab=96.37 E-value=0.0072 Score=61.98 Aligned_cols=78 Identities=23% Similarity=0.337 Sum_probs=53.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-------------------HHHHH---HHHHhCCcceeecc-
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-------------------ERVAA---ICEELNGVEIIYKP- 299 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-------------------~ra~~---la~~~g~~~~~~~~- 299 (513)
++.+..|||||||+.|.-++.||.+.|+.++-++|-+. .|++. +...++. .+.+..
T Consensus 63 ~Lk~s~VLVVGaGGLGcPa~~YLaaaGvG~lGiVD~DvVe~sNlhRQVlh~ea~vg~~Ka~sA~~~lr~lNs-~v~v~~y 141 (427)
T KOG2017|consen 63 SLKNSSVLVVGAGGLGCPAAQYLAAAGVGRLGIVDYDVVELSNLHRQVLHTEARVGMHKAESAAAFLRRLNS-HVEVQTY 141 (427)
T ss_pred ccCCccEEEEccCCCCCHHHHHHHHcCCCeecccccceeehhhHHHHHhhhhhhhhhHHHHHHHHHHHhcCC-Cceeeec
Confidence 46778999999999999999999999998887766421 12222 1222221 123322
Q ss_pred -----cchHHhhcCCCcEEEEcCCCCc
Q 010322 300 -----LSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 300 -----~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
.++..+.++++|||.+||-.+.
T Consensus 142 ~~~L~~sNa~~Ii~~YdvVlDCTDN~~ 168 (427)
T KOG2017|consen 142 NEFLSSSNAFDIIKQYDVVLDCTDNVP 168 (427)
T ss_pred hhhccchhHHHHhhccceEEEcCCCcc
Confidence 2345667889999999998764
No 388
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.36 E-value=0.01 Score=63.95 Aligned_cols=74 Identities=22% Similarity=0.430 Sum_probs=53.8
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceee--cccchHHhh-cCCCcEEEEcCCCCc
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIY--KPLSEMLSC-AADADVVFTSTASEA 321 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~--~~~~~~~~~-l~~aDVVI~AT~s~~ 321 (513)
++|+|+|+|.+|+.+++.|...|.. |+++++++++.+.+.+..+...+.- .....+.+. +.++|.||.+|+...
T Consensus 1 m~viIiG~G~ig~~~a~~L~~~g~~-v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~~ 77 (453)
T PRK09496 1 MKIIIVGAGQVGYTLAENLSGENND-VTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSDE 77 (453)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCc-EEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCChH
Confidence 3799999999999999999999985 8999999998877665443110111 111234444 678999999998754
No 389
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.35 E-value=0.011 Score=64.34 Aligned_cols=76 Identities=22% Similarity=0.274 Sum_probs=50.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHH-HHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEE-RVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~-ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
++.+++|+|||+|.+|..++..|...|.+ |+++++++. ....+.+.+...++.+..-.... ...++|+||.++|.+
T Consensus 13 ~~~~~~v~viG~G~~G~~~A~~L~~~G~~-V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-~~~~~D~Vv~s~Gi~ 89 (480)
T PRK01438 13 DWQGLRVVVAGLGVSGFAAADALLELGAR-VTVVDDGDDERHRALAAILEALGATVRLGPGPT-LPEDTDLVVTSPGWR 89 (480)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-ccCCCCEEEECCCcC
Confidence 46789999999999999999999999985 999986542 22222222211112222111111 235799999999875
No 390
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=96.35 E-value=0.016 Score=58.44 Aligned_cols=87 Identities=21% Similarity=0.314 Sum_probs=64.5
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcccH-HHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCC
Q 010322 232 VELALMKLPESSHATARMLVIGAGK-MGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADA 310 (513)
Q Consensus 232 v~la~~~~~~~~l~g~~VlVIGaG~-mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~a 310 (513)
+.+.+. ++ .++.|++++|||.|. +|+-++..|...+++ |++++..- .++.+..+.|
T Consensus 144 ~~ll~~-~~-i~l~Gk~~vVVGrS~iVGkPla~lL~~~naT-VtvcHs~T--------------------~~l~~~~k~A 200 (283)
T COG0190 144 MTLLEE-YG-IDLRGKNVVVVGRSNIVGKPLALLLLNANAT-VTVCHSRT--------------------KDLASITKNA 200 (283)
T ss_pred HHHHHH-hC-CCCCCCEEEEECCCCcCcHHHHHHHHhCCCE-EEEEcCCC--------------------CCHHHHhhhC
Confidence 455443 33 578999999999955 689999999998985 99887642 1233445789
Q ss_pred cEEEEcCCCCccCCChhhhhcCCchhhhcCCcEEEEeccCCC
Q 010322 311 DVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPR 352 (513)
Q Consensus 311 DVVI~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDlavPr 352 (513)
|+||.|+|.|+. ++.+++.. | .++||+++-|
T Consensus 201 DIvv~AvG~p~~-i~~d~vk~---------g-avVIDVGinr 231 (283)
T COG0190 201 DIVVVAVGKPHF-IKADMVKP---------G-AVVIDVGINR 231 (283)
T ss_pred CEEEEecCCccc-cccccccC---------C-CEEEecCCcc
Confidence 999999999976 46666643 3 7899998755
No 391
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.01 Score=58.60 Aligned_cols=74 Identities=18% Similarity=0.254 Sum_probs=53.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCccee-----ecccchHHhh--------cCCCcE
Q 010322 247 ARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEII-----YKPLSEMLSC--------AADADV 312 (513)
Q Consensus 247 ~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~-----~~~~~~~~~~--------l~~aDV 312 (513)
++++|+|+ |.+|+.+++.|...|+ +|++++|+.++.+++...+++..+. +...+++.+. ....|+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 67999998 9999999999999998 5999999999888887765421111 1122222222 235699
Q ss_pred EEEcCCCCc
Q 010322 313 VFTSTASEA 321 (513)
Q Consensus 313 VI~AT~s~~ 321 (513)
||.+.+...
T Consensus 81 vi~~ag~~~ 89 (260)
T PRK08267 81 LFNNAGILR 89 (260)
T ss_pred EEECCCCCC
Confidence 999987653
No 392
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=96.35 E-value=0.01 Score=58.68 Aligned_cols=32 Identities=28% Similarity=0.583 Sum_probs=29.8
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCC
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRS 279 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs 279 (513)
+|+|+|+|++|..+++.|...|+.+++++|.+
T Consensus 1 kVlvvG~GGlG~eilk~La~~Gvg~i~ivD~D 32 (234)
T cd01484 1 KVLLVGAGGIGCELLKNLALMGFGQIHVIDMD 32 (234)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 58999999999999999999999999998864
No 393
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.34 E-value=0.01 Score=61.18 Aligned_cols=74 Identities=20% Similarity=0.355 Sum_probs=53.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhCCcc-----eeecccchHHhhcCCCcEEEEcCCC
Q 010322 246 TARMLVIGAGKMGKLVIKHLVAKGC-TKMVVVNRSEERVAAICEELNGVE-----IIYKPLSEMLSCAADADVVFTSTAS 319 (513)
Q Consensus 246 g~~VlVIGaG~mG~~ia~~L~~~G~-~~V~v~nRs~~ra~~la~~~g~~~-----~~~~~~~~~~~~l~~aDVVI~AT~s 319 (513)
-.+|.|||+|.+|..++..|...|. .++.++|++.+++...+..+.... ..+....+. +.+.++|+||.+.|.
T Consensus 3 ~~Ki~IiGaG~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy-~~~~~adivvitaG~ 81 (312)
T cd05293 3 RNKVTVVGVGQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDY-SVTANSKVVIVTAGA 81 (312)
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCH-HHhCCCCEEEECCCC
Confidence 4589999999999999999988876 579999998877765555543210 112212333 347899999998887
Q ss_pred C
Q 010322 320 E 320 (513)
Q Consensus 320 ~ 320 (513)
+
T Consensus 82 ~ 82 (312)
T cd05293 82 R 82 (312)
T ss_pred C
Confidence 5
No 394
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.013 Score=57.60 Aligned_cols=77 Identities=19% Similarity=0.282 Sum_probs=54.5
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceeec-----ccchHHhh-------c
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIYK-----PLSEMLSC-------A 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~~-----~~~~~~~~-------l 307 (513)
++.+++++|.|+ |.+|+.+++.|...|+ +|+++.|+.++++.+...+.. ....+. ..+++.+. .
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 467899999998 9999999999999998 599999999887776655411 011111 11222222 2
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|+||.+.+..
T Consensus 85 ~~~d~li~~ag~~ 97 (258)
T PRK06949 85 GTIDILVNNSGVS 97 (258)
T ss_pred CCCCEEEECCCCC
Confidence 3689999998753
No 395
>PRK06194 hypothetical protein; Provisional
Probab=96.33 E-value=0.0085 Score=60.07 Aligned_cols=78 Identities=18% Similarity=0.265 Sum_probs=54.1
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceeec-----ccchHHhhc-------
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIYK-----PLSEMLSCA------- 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~~-----~~~~~~~~l------- 307 (513)
++.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.++......++.. ..+.+. ..+++.+.+
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF 81 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 356889999998 9999999999999998 499999998777666555421 111111 122333322
Q ss_pred CCCcEEEEcCCCCc
Q 010322 308 ADADVVFTSTASEA 321 (513)
Q Consensus 308 ~~aDVVI~AT~s~~ 321 (513)
...|+||.+.+...
T Consensus 82 g~id~vi~~Ag~~~ 95 (287)
T PRK06194 82 GAVHLLFNNAGVGA 95 (287)
T ss_pred CCCCEEEECCCCCC
Confidence 35799999987643
No 396
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.015 Score=56.57 Aligned_cols=77 Identities=17% Similarity=0.180 Sum_probs=53.8
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceeec--cc---chHHhh-------c
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIYK--PL---SEMLSC-------A 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~~--~~---~~~~~~-------l 307 (513)
.+.+++++|+|+ |.+|+.+++.|...|++ |++++|++++...+.+.+.. ..+.+. +. +++... .
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGAT-VAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL 82 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 457899999998 99999999999999985 88889998877666555421 111111 11 122221 2
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|+||.+.+..
T Consensus 83 ~~id~vi~~ag~~ 95 (250)
T PRK12939 83 GGLDGLVNNAGIT 95 (250)
T ss_pred CCCCEEEECCCCC
Confidence 5789999998764
No 397
>TIGR01546 GAPDH-II_archae glyceraldehyde-3-phosphate dehydrogenase, type II. All of the members of the seed are characterized. See, for instance. This model is very solid, there are no species falling between trusted and noise at this time. The closest relatives scoring in the noise are the class I GAPDH's.
Probab=96.33 E-value=0.02 Score=59.42 Aligned_cols=93 Identities=18% Similarity=0.091 Sum_probs=62.4
Q ss_pred EEEEcccHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhCCcce--------e-----ecccchHHhhcCCCcEEE
Q 010322 249 MLVIGAGKMGKLVIKHLVAK-GCTKMVVVNRSEERVAAICEELNGVEI--------I-----YKPLSEMLSCAADADVVF 314 (513)
Q Consensus 249 VlVIGaG~mG~~ia~~L~~~-G~~~V~v~nRs~~ra~~la~~~g~~~~--------~-----~~~~~~~~~~l~~aDVVI 314 (513)
|.|+|+|.||+.+++.+... +.+-|.|.+.++++...++..++-..+ . +....++.+.+.++|+|+
T Consensus 1 VaInG~GrIGr~varav~~~~d~elVaVnD~~~~~~a~lA~~lgyds~~~~~~~~~~~~~~~l~v~g~~eeLl~~vDiVv 80 (333)
T TIGR01546 1 VGVNGYGTIGKRVADAVTKQDDMKLVGVTKTSPDFEAYRAKELGIPVYAASEEFIPRFEEAGIEVAGTLEDLLEKVDIVV 80 (333)
T ss_pred CEEECCcHHHHHHHHHHhhCCCcEEEEEecCChHHHHHHHHHhCCCEEeecCCcceEeccCceEecCCHHHHhhcCCEEE
Confidence 57999999999999998764 455455677777877778876652100 0 001223555667899999
Q ss_pred EcCCCCccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 315 TSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 315 ~AT~s~~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
.||+......+.+.+..+ +.+.+++.-
T Consensus 81 e~Tp~~~~~~na~~~~~~-------GakaVl~~~ 107 (333)
T TIGR01546 81 DATPGGIGAKNKPLYEKA-------GVKAIFQGG 107 (333)
T ss_pred ECCCCCCChhhHHHHHhC-------CcCEEEECC
Confidence 999998877666655443 334667653
No 398
>COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=96.33 E-value=0.0088 Score=60.58 Aligned_cols=71 Identities=20% Similarity=0.158 Sum_probs=56.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
+.|++|.|||+|..|.+.+..|+..|.. |++-.|......+.|.+-|- .+ .+..++++.+|+|+.-+|...
T Consensus 16 LkgK~iaIIGYGsQG~ahalNLRDSGln-ViiGlr~g~~s~~kA~~dGf---~V---~~v~ea~k~ADvim~L~PDe~ 86 (338)
T COG0059 16 LKGKKVAIIGYGSQGHAQALNLRDSGLN-VIIGLRKGSSSWKKAKEDGF---KV---YTVEEAAKRADVVMILLPDEQ 86 (338)
T ss_pred hcCCeEEEEecChHHHHHHhhhhhcCCc-EEEEecCCchhHHHHHhcCC---Ee---ecHHHHhhcCCEEEEeCchhh
Confidence 5899999999999999999999999996 88888876665566666442 33 345667789999999998753
No 399
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.32 E-value=0.018 Score=56.60 Aligned_cols=77 Identities=18% Similarity=0.304 Sum_probs=54.0
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceeec--cc---chHHhh-------c
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIYK--PL---SEMLSC-------A 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~~--~~---~~~~~~-------l 307 (513)
.+.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.++...+..++.. ...... +. +++.+. .
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 467899999998 9999999999999998 599999998887776665421 111111 11 222221 2
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|+||.+.+..
T Consensus 85 ~~id~vi~~ag~~ 97 (254)
T PRK08085 85 GPIDVLINNAGIQ 97 (254)
T ss_pred CCCCEEEECCCcC
Confidence 4689999988753
No 400
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.31 E-value=0.01 Score=62.02 Aligned_cols=73 Identities=23% Similarity=0.339 Sum_probs=53.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh------C-Ccce--eecccchHHhhcCCCcEEEEc
Q 010322 246 TARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL------N-GVEI--IYKPLSEMLSCAADADVVFTS 316 (513)
Q Consensus 246 g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~------g-~~~~--~~~~~~~~~~~l~~aDVVI~A 316 (513)
..+|.|||+|.||.+++..|...| . ++++.|+++..+.+.+.. + +... .+....+..+.+.++|+||.|
T Consensus 7 ~mkI~IiGaGa~G~alA~~La~~g-~-v~l~~~~~~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~a~~~aDlVila 84 (341)
T PRK12439 7 EPKVVVLGGGSWGTTVASICARRG-P-TLQWVRSAETADDINDNHRNSRYLGNDVVLSDTLRATTDFAEAANCADVVVMG 84 (341)
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-C-EEEEeCCHHHHHHHHhcCCCcccCCCCcccCCCeEEECCHHHHHhcCCEEEEE
Confidence 467999999999999999999988 3 778889988887766531 1 1000 111224555667899999999
Q ss_pred CCCC
Q 010322 317 TASE 320 (513)
Q Consensus 317 T~s~ 320 (513)
+++.
T Consensus 85 vps~ 88 (341)
T PRK12439 85 VPSH 88 (341)
T ss_pred eCHH
Confidence 9974
No 401
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.31 E-value=0.014 Score=53.02 Aligned_cols=71 Identities=30% Similarity=0.392 Sum_probs=47.8
Q ss_pred EEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc----c--eeeccc---chHHhhcCCCcEEEEcCCC
Q 010322 249 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV----E--IIYKPL---SEMLSCAADADVVFTSTAS 319 (513)
Q Consensus 249 VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~----~--~~~~~~---~~~~~~l~~aDVVI~AT~s 319 (513)
|+|+|+|.||...+..|...|. +|+++.|+. +++.+.+. |.. . ..+.+. .........+|+||.||.+
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa 77 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQ-GLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKA 77 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHH-CEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSG
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhhe-eEEEEecccceecccccccCcchhccCCCcEEEEEecc
Confidence 6899999999999999999887 499999998 77665443 210 0 001111 1111235689999999988
Q ss_pred Ccc
Q 010322 320 EAP 322 (513)
Q Consensus 320 ~~~ 322 (513)
...
T Consensus 78 ~~~ 80 (151)
T PF02558_consen 78 YQL 80 (151)
T ss_dssp GGH
T ss_pred cch
Confidence 643
No 402
>PLN02712 arogenate dehydrogenase
Probab=96.30 E-value=0.012 Score=66.81 Aligned_cols=68 Identities=19% Similarity=0.373 Sum_probs=50.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhc-CCCcEEEEcCCCC
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCA-ADADVVFTSTASE 320 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l-~~aDVVI~AT~s~ 320 (513)
..++|+|||+|.||..+++.|...|. +|++++|+..+ ..+.++|. .. ..+..+.+ ..+|+||.||+..
T Consensus 51 ~~~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~--~~A~~~Gv---~~--~~d~~e~~~~~aDvViLavP~~ 119 (667)
T PLN02712 51 TQLKIAIIGFGNYGQFLAKTLISQGH-TVLAHSRSDHS--LAARSLGV---SF--FLDPHDLCERHPDVILLCTSII 119 (667)
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHHHcCC---EE--eCCHHHHhhcCCCEEEEcCCHH
Confidence 34789999999999999999999997 59999998554 34556653 11 23444433 4699999999964
No 403
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=96.30 E-value=0.012 Score=60.78 Aligned_cols=73 Identities=29% Similarity=0.415 Sum_probs=56.7
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh------CCc--ceeecccchHHhhcCCCcEEEEcCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL------NGV--EIIYKPLSEMLSCAADADVVFTSTA 318 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~------g~~--~~~~~~~~~~~~~l~~aDVVI~AT~ 318 (513)
.+|.|||+|..|.+++..|...|. +|.+|.|+++-..++-... ++. ...+....|+.+++.++|+|+.++|
T Consensus 2 ~kI~ViGaGswGTALA~~la~ng~-~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~avP 80 (329)
T COG0240 2 MKIAVIGAGSWGTALAKVLARNGH-EVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAVP 80 (329)
T ss_pred ceEEEEcCChHHHHHHHHHHhcCC-eeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEECC
Confidence 579999999999999999999985 6999999998877766542 111 0112234578888889999999999
Q ss_pred CC
Q 010322 319 SE 320 (513)
Q Consensus 319 s~ 320 (513)
+.
T Consensus 81 s~ 82 (329)
T COG0240 81 SQ 82 (329)
T ss_pred hH
Confidence 84
No 404
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.29 E-value=0.0095 Score=61.37 Aligned_cols=71 Identities=21% Similarity=0.411 Sum_probs=52.2
Q ss_pred eEEEEcccHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhCCc-------ceeecccchHHhhcCCCcEEEEcCCC
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGC-TKMVVVNRSEERVAAICEELNGV-------EIIYKPLSEMLSCAADADVVFTSTAS 319 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~-~~V~v~nRs~~ra~~la~~~g~~-------~~~~~~~~~~~~~l~~aDVVI~AT~s 319 (513)
+|.|||+|.+|..+|..|...|. .++.++|.+.++++..+..+... ...+. ..+ .+.++++|+||-+.|.
T Consensus 1 Ki~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~-~~~-y~~~~~aDivvitaG~ 78 (307)
T cd05290 1 KLVVIGAGHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIR-AGD-YDDCADADIIVITAGP 78 (307)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEE-ECC-HHHhCCCCEEEECCCC
Confidence 58999999999999999988876 57999999877665555544321 11111 122 5668999999999887
Q ss_pred C
Q 010322 320 E 320 (513)
Q Consensus 320 ~ 320 (513)
+
T Consensus 79 ~ 79 (307)
T cd05290 79 S 79 (307)
T ss_pred C
Confidence 5
No 405
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.29 E-value=0.0089 Score=59.99 Aligned_cols=73 Identities=23% Similarity=0.348 Sum_probs=53.8
Q ss_pred EEEEcc-cHHHHHHHHHHHHcC--C-CeEEEEeCCHHHHHHHHHHhCCc-----ceeecccchHHhhcCCCcEEEEcCCC
Q 010322 249 MLVIGA-GKMGKLVIKHLVAKG--C-TKMVVVNRSEERVAAICEELNGV-----EIIYKPLSEMLSCAADADVVFTSTAS 319 (513)
Q Consensus 249 VlVIGa-G~mG~~ia~~L~~~G--~-~~V~v~nRs~~ra~~la~~~g~~-----~~~~~~~~~~~~~l~~aDVVI~AT~s 319 (513)
|.|||+ |.+|..++..|...| . .+|.++|++.++++..+..+... ...+...+++.+.+.+||+||.+.+.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 579999 999999999998877 3 47999999887776555544211 11222345667788999999999877
Q ss_pred Cc
Q 010322 320 EA 321 (513)
Q Consensus 320 ~~ 321 (513)
+.
T Consensus 81 ~~ 82 (263)
T cd00650 81 GR 82 (263)
T ss_pred CC
Confidence 53
No 406
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.28 E-value=0.014 Score=57.25 Aligned_cols=74 Identities=16% Similarity=0.248 Sum_probs=51.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHH-HHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEE-RVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~-ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
+.+++|||||+|.+|..=+..|...|+. |+|+..... ....++.. +. +.+..-+=-.+.+.++++||.||..+.
T Consensus 23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA~-VtVVap~i~~el~~l~~~-~~--i~~~~r~~~~~dl~g~~LViaATdD~~ 97 (223)
T PRK05562 23 SNKIKVLIIGGGKAAFIKGKTFLKKGCY-VYILSKKFSKEFLDLKKY-GN--LKLIKGNYDKEFIKDKHLIVIATDDEK 97 (223)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCCCHHHHHHHhC-CC--EEEEeCCCChHHhCCCcEEEECCCCHH
Confidence 4688999999999999989999999985 999987642 23344432 22 233221111234679999999998653
No 407
>PRK06182 short chain dehydrogenase; Validated
Probab=96.27 E-value=0.013 Score=58.45 Aligned_cols=74 Identities=16% Similarity=0.220 Sum_probs=51.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcc--eeecccchHHhhc-------CCCcEEE
Q 010322 245 ATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVE--IIYKPLSEMLSCA-------ADADVVF 314 (513)
Q Consensus 245 ~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~--~~~~~~~~~~~~l-------~~aDVVI 314 (513)
.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.++..++... +... ..+...+++...+ .+.|+||
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASL-GVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhC-CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 4689999998 9999999999999998 499999998887665432 2111 1112222333222 3789999
Q ss_pred EcCCCC
Q 010322 315 TSTASE 320 (513)
Q Consensus 315 ~AT~s~ 320 (513)
++.+..
T Consensus 80 ~~ag~~ 85 (273)
T PRK06182 80 NNAGYG 85 (273)
T ss_pred ECCCcC
Confidence 998764
No 408
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.014 Score=57.33 Aligned_cols=76 Identities=14% Similarity=0.233 Sum_probs=53.5
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC--Ccce---e--ecccchHHh-------hcC
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN--GVEI---I--YKPLSEMLS-------CAA 308 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g--~~~~---~--~~~~~~~~~-------~l~ 308 (513)
+.+++++|.|+ |.+|+.+++.|...|+ +|++++|++++.+.+..++. +..+ . +...+++.. ...
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG 81 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 46899999998 9999999999999998 59999999888777666542 1111 1 111122222 235
Q ss_pred CCcEEEEcCCCC
Q 010322 309 DADVVFTSTASE 320 (513)
Q Consensus 309 ~aDVVI~AT~s~ 320 (513)
..|+||.+.+..
T Consensus 82 ~~d~vi~~ag~~ 93 (258)
T PRK07890 82 RVDALVNNAFRV 93 (258)
T ss_pred CccEEEECCccC
Confidence 689999988753
No 409
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.26 E-value=0.0099 Score=60.97 Aligned_cols=70 Identities=17% Similarity=0.379 Sum_probs=50.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCccee---ecccchHHhhcCCCcEEEEcCCC
Q 010322 247 ARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEII---YKPLSEMLSCAADADVVFTSTAS 319 (513)
Q Consensus 247 ~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~---~~~~~~~~~~l~~aDVVI~AT~s 319 (513)
++|+|+|+ |-+|+.+++.|...|. +|++..|+..+...+.. .+ .... +...+++.+++.++|+||.+++.
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~-~~-v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~ 74 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKE-WG-AELVYGDLSLPETLPPSFKGVTAIIDASTS 74 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhh-cC-CEEEECCCCCHHHHHHHHCCCCEEEECCCC
Confidence 37999997 9999999999999998 59999998766543332 22 1111 12234566778999999998754
No 410
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.26 E-value=0.015 Score=58.15 Aligned_cols=77 Identities=18% Similarity=0.359 Sum_probs=54.5
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceee--ccc---chHHh-------hc
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIY--KPL---SEMLS-------CA 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~--~~~---~~~~~-------~l 307 (513)
++.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.+..+.+.+++.. ..+.. .+. +++.. ..
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF 85 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 467899999998 9999999999999999 599999998877777665421 11111 111 12222 13
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|++|.+++..
T Consensus 86 g~id~li~~ag~~ 98 (278)
T PRK08277 86 GPCDILINGAGGN 98 (278)
T ss_pred CCCCEEEECCCCC
Confidence 4789999998754
No 411
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.25 E-value=0.013 Score=57.68 Aligned_cols=77 Identities=16% Similarity=0.278 Sum_probs=54.0
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceee--ccc---chHHhh-------c
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIY--KPL---SEMLSC-------A 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~--~~~---~~~~~~-------l 307 (513)
++.+++++|.|+ |.+|+.+++.|...|+. |.+++|++++...+.+.+.. ..+.+ .+. +.+.+. .
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAA-VAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF 82 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 467899999999 99999999999999995 89999998777666655421 11111 111 122222 2
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|+||.+.+..
T Consensus 83 ~~~d~vi~~ag~~ 95 (262)
T PRK13394 83 GSVDILVSNAGIQ 95 (262)
T ss_pred CCCCEEEECCccC
Confidence 4589999998764
No 412
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.016 Score=57.40 Aligned_cols=76 Identities=14% Similarity=0.265 Sum_probs=53.5
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceeec--cc---chHHh-------hc
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIYK--PL---SEMLS-------CA 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~~--~~---~~~~~-------~l 307 (513)
++.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++.+++.+.+.. ..+.+. +. +++.. .+
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF 85 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 357899999999 7899999999999999 699999998887766655421 111111 11 12221 13
Q ss_pred CCCcEEEEcCCC
Q 010322 308 ADADVVFTSTAS 319 (513)
Q Consensus 308 ~~aDVVI~AT~s 319 (513)
...|+||.+.+.
T Consensus 86 ~~id~vi~~Ag~ 97 (263)
T PRK07814 86 GRLDIVVNNVGG 97 (263)
T ss_pred CCCCEEEECCCC
Confidence 478999999774
No 413
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.24 E-value=0.017 Score=56.88 Aligned_cols=75 Identities=19% Similarity=0.232 Sum_probs=54.2
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeec-----ccchHHh-------hcCCC
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYK-----PLSEMLS-------CAADA 310 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~-----~~~~~~~-------~l~~a 310 (513)
+.+++++|.|+ |.+|+.+++.|...|++ |++++|+.++...+.+.++.. +... ..+++.. .....
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGAR-VVIADIKPARARLAALEIGPA-AIAVSLDVTRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHHhCCc-eEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 56889999998 99999999999999985 999999998887777665421 1111 1122222 23468
Q ss_pred cEEEEcCCCC
Q 010322 311 DVVFTSTASE 320 (513)
Q Consensus 311 DVVI~AT~s~ 320 (513)
|++|.+.+..
T Consensus 82 d~li~~ag~~ 91 (257)
T PRK07067 82 DILFNNAALF 91 (257)
T ss_pred CEEEECCCcC
Confidence 9999987653
No 414
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.24 E-value=0.017 Score=50.01 Aligned_cols=71 Identities=30% Similarity=0.470 Sum_probs=50.0
Q ss_pred EEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc---chHHh-hcCCCcEEEEcCCCCcc
Q 010322 249 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL---SEMLS-CAADADVVFTSTASEAP 322 (513)
Q Consensus 249 VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~---~~~~~-~l~~aDVVI~AT~s~~~ 322 (513)
|+|+|+|.+|+.+++.|...+ .+|+++++++++.+.+.+.. . .+..-+. +.+.+ -+.++|.||.+|+....
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~-~~vvvid~d~~~~~~~~~~~-~-~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGG-IDVVVIDRDPERVEELREEG-V-EVIYGDATDPEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTT-SEEEEEESSHHHHHHHHHTT-S-EEEES-TTSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCC-CEEEEEECCcHHHHHHHhcc-c-ccccccchhhhHHhhcCccccCEEEEccCCHHH
Confidence 689999999999999999955 46999999999987766543 2 1111111 12222 36799999999987643
No 415
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.22 E-value=0.023 Score=51.88 Aligned_cols=75 Identities=19% Similarity=0.380 Sum_probs=52.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCC--HHHHHHHHHHhC--Ccceeeccc-----chHH-------hhcCC
Q 010322 247 ARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRS--EERVAAICEELN--GVEIIYKPL-----SEML-------SCAAD 309 (513)
Q Consensus 247 ~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs--~~ra~~la~~~g--~~~~~~~~~-----~~~~-------~~l~~ 309 (513)
|+++|+|+ |++|+.+++.|...|...|+++.|+ .++..++..++. +..+.+... +++. +....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 57999997 9999999999999988889999999 677777766653 112222221 1211 12347
Q ss_pred CcEEEEcCCCCc
Q 010322 310 ADVVFTSTASEA 321 (513)
Q Consensus 310 aDVVI~AT~s~~ 321 (513)
.|++|.+.+...
T Consensus 81 ld~li~~ag~~~ 92 (167)
T PF00106_consen 81 LDILINNAGIFS 92 (167)
T ss_dssp ESEEEEECSCTT
T ss_pred cccccccccccc
Confidence 899998877654
No 416
>PTZ00431 pyrroline carboxylate reductase; Provisional
Probab=96.22 E-value=0.0081 Score=60.24 Aligned_cols=64 Identities=17% Similarity=0.235 Sum_probs=46.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCC---CeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 246 TARMLVIGAGKMGKLVIKHLVAKGC---TKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 246 g~~VlVIGaG~mG~~ia~~L~~~G~---~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
..+|.|||+|.||.+++..|...|. .+|++++|+.++. + .. ...+..+.+..+|+||.|++...
T Consensus 3 ~mkI~iIG~G~mG~ai~~~l~~~~~~~~~~i~~~~~~~~~~-------~---~~--~~~~~~~~~~~~D~Vilavkp~~ 69 (260)
T PTZ00431 3 NIRVGFIGLGKMGSALAYGIENSNIIGKENIYYHTPSKKNT-------P---FV--YLQSNEELAKTCDIIVLAVKPDL 69 (260)
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCCCcceEEEECCChhcC-------C---eE--EeCChHHHHHhCCEEEEEeCHHH
Confidence 4689999999999999999998773 3599999986542 1 11 12233344568899999987643
No 417
>PLN02253 xanthoxin dehydrogenase
Probab=96.22 E-value=0.021 Score=57.07 Aligned_cols=77 Identities=13% Similarity=0.324 Sum_probs=54.2
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc-ceee-----cccchHHhh-------cC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV-EIIY-----KPLSEMLSC-------AA 308 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~-~~~~-----~~~~~~~~~-------l~ 308 (513)
.+.+++++|.|+ |.+|+.+++.|...|++ |++++|+.+..+++.+.++.. .+.+ ...+++.+. ..
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAK-VCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG 93 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 467899999998 99999999999999985 999999887776666655321 1111 111222222 24
Q ss_pred CCcEEEEcCCCC
Q 010322 309 DADVVFTSTASE 320 (513)
Q Consensus 309 ~aDVVI~AT~s~ 320 (513)
..|+||.+.+..
T Consensus 94 ~id~li~~Ag~~ 105 (280)
T PLN02253 94 TLDIMVNNAGLT 105 (280)
T ss_pred CCCEEEECCCcC
Confidence 689999998754
No 418
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=96.21 E-value=0.013 Score=60.18 Aligned_cols=74 Identities=19% Similarity=0.228 Sum_probs=50.7
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC------cceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG------VEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~------~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
.+|+|+|+|.||..++.+|...|.. |+++.|..++.+.+.++-|- ....+.......+....+|+||.||.+.
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~~-V~lv~r~~~~~~~i~~~~Gl~i~~~g~~~~~~~~~~~~~~~~~~D~viv~vK~~ 81 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGLP-VRLILRDRQRLAAYQQAGGLTLVEQGQASLYAIPAETADAAEPIHRLLLACKAY 81 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCC-eEEEEechHHHHHHhhcCCeEEeeCCcceeeccCCCCcccccccCEEEEECCHH
Confidence 5799999999999999999999974 99999987777666553221 0001100001112235789999999886
Q ss_pred c
Q 010322 321 A 321 (513)
Q Consensus 321 ~ 321 (513)
.
T Consensus 82 ~ 82 (305)
T PRK05708 82 D 82 (305)
T ss_pred h
Confidence 4
No 419
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=96.21 E-value=0.014 Score=59.83 Aligned_cols=72 Identities=19% Similarity=0.272 Sum_probs=49.1
Q ss_pred EEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC------CcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 249 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN------GVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 249 VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g------~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
|.|||+|.||..++..|...|..+|+++|++++++...+..+. .....+....+. +.+.+||+||.|.+.|.
T Consensus 1 I~IIGaG~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~-~~l~dADiVIit~g~p~ 78 (300)
T cd01339 1 ISIIGAGNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDY-EDIAGSDVVVITAGIPR 78 (300)
T ss_pred CEEECCCHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCH-HHhCCCCEEEEecCCCC
Confidence 5799999999999999988774379999998776533322111 011122222343 45899999999987754
No 420
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3. UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.21 E-value=0.016 Score=59.13 Aligned_cols=74 Identities=19% Similarity=0.308 Sum_probs=49.6
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCC-------------------HHHHHHHHHHhCCc--ceeeccc-----c
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRS-------------------EERVAAICEELNGV--EIIYKPL-----S 301 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs-------------------~~ra~~la~~~g~~--~~~~~~~-----~ 301 (513)
+|+|+|+|++|..+++.|...|+.+|+++|.+ ..|++..++.+... .+.+.+. +
T Consensus 1 kVlVVGaGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~ 80 (291)
T cd01488 1 KILVIGAGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD 80 (291)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence 58999999999999999999999999997753 12444333333210 1122221 1
Q ss_pred hHHhhcCCCcEEEEcCCCCc
Q 010322 302 EMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 302 ~~~~~l~~aDVVI~AT~s~~ 321 (513)
...+.+.++|+||+|+.+..
T Consensus 81 ~~~~f~~~fdvVi~alDn~~ 100 (291)
T cd01488 81 KDEEFYRQFNIIICGLDSIE 100 (291)
T ss_pred hhHHHhcCCCEEEECCCCHH
Confidence 12356789999999987653
No 421
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.19 E-value=0.016 Score=56.41 Aligned_cols=77 Identities=22% Similarity=0.405 Sum_probs=53.4
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceeecc-----cchHHhh-------c
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIYKP-----LSEMLSC-------A 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~~~-----~~~~~~~-------l 307 (513)
++.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++..++..++.. ..+.+.. .+++.+. .
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL 82 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 356789999998 8999999999999998 699999998877666554421 1111111 1222222 2
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|+||.+.+..
T Consensus 83 ~~id~vi~~ag~~ 95 (239)
T PRK07666 83 GSIDILINNAGIS 95 (239)
T ss_pred CCccEEEEcCccc
Confidence 4789999998764
No 422
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.19 E-value=0.0049 Score=54.80 Aligned_cols=70 Identities=21% Similarity=0.290 Sum_probs=45.0
Q ss_pred eEEEEcc-cHHHHHHHHHHHH-cCCCeEEEEeCCHH-H-HHHHHHHhCCcceeecccchHHhhcCCCcEEEEcC
Q 010322 248 RMLVIGA-GKMGKLVIKHLVA-KGCTKMVVVNRSEE-R-VAAICEELNGVEIIYKPLSEMLSCAADADVVFTST 317 (513)
Q Consensus 248 ~VlVIGa-G~mG~~ia~~L~~-~G~~~V~v~nRs~~-r-a~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT 317 (513)
+|+|+|+ |.||+.+++.+.. .|.+=+.+++|++. . .+++.+-.+.....+...+++.+.+..+||||+.|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT 75 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFT 75 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcC
Confidence 7999999 9999999999998 56665667788751 1 11122211211111223467778888899999999
No 423
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.18 E-value=0.016 Score=56.76 Aligned_cols=76 Identities=22% Similarity=0.305 Sum_probs=52.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC--Ccceee--ccc---chHHh-------hcC
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN--GVEIIY--KPL---SEMLS-------CAA 308 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g--~~~~~~--~~~---~~~~~-------~l~ 308 (513)
+.+++|+|.|+ |.+|+.+++.|...|. +|++++|++++...+..++. +..+.+ .++ +++.+ ...
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFG 80 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35789999997 9999999999999998 49999999887766655541 111111 111 12222 234
Q ss_pred CCcEEEEcCCCC
Q 010322 309 DADVVFTSTASE 320 (513)
Q Consensus 309 ~aDVVI~AT~s~ 320 (513)
..|+||.+++..
T Consensus 81 ~~d~vi~~a~~~ 92 (258)
T PRK12429 81 GVDILVNNAGIQ 92 (258)
T ss_pred CCCEEEECCCCC
Confidence 689999998754
No 424
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.18 E-value=0.011 Score=63.70 Aligned_cols=76 Identities=21% Similarity=0.141 Sum_probs=47.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcC-CCcEEEEcCCCC
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAA-DADVVFTSTASE 320 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~-~aDVVI~AT~s~ 320 (513)
+.+++|+|+|.|.+|.++++.|...|++ |++++++........+.+....+.+.......+.+. ++|+||.+.+.+
T Consensus 3 ~~~k~v~v~G~g~~G~s~a~~l~~~G~~-V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~ 79 (447)
T PRK02472 3 YQNKKVLVLGLAKSGYAAAKLLHKLGAN-VTVNDGKPFSENPEAQELLEEGIKVICGSHPLELLDEDFDLMVKNPGIP 79 (447)
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHCCCE-EEEEcCCCccchhHHHHHHhcCCEEEeCCCCHHHhcCcCCEEEECCCCC
Confidence 5689999999999999999999999985 999998653322222222111112221111122233 389888887654
No 425
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.011 Score=57.94 Aligned_cols=47 Identities=17% Similarity=0.281 Sum_probs=39.7
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL 290 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~ 290 (513)
.+.+++++|.|+ |.+|..+++.|...|++ |++++|+.++...+.+.+
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~ 51 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAK-VVVADRDAAGGEETVALI 51 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHH
Confidence 467899999998 99999999999999985 999999988765555443
No 426
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=96.16 E-value=0.013 Score=67.15 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=33.1
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERV 283 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra 283 (513)
++|.|||+|.||..++..+...|+. |++++++++.+
T Consensus 314 ~~v~ViGaG~mG~gIA~~~a~~G~~-V~l~d~~~~~l 349 (715)
T PRK11730 314 KQAAVLGAGIMGGGIAYQSASKGVP-VIMKDINQKAL 349 (715)
T ss_pred ceEEEECCchhHHHHHHHHHhCCCe-EEEEeCCHHHH
Confidence 6899999999999999999999985 99999998765
No 427
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=96.15 E-value=0.01 Score=63.69 Aligned_cols=68 Identities=15% Similarity=0.224 Sum_probs=49.7
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHh---------------hcCCCc
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLS---------------CAADAD 311 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~---------------~l~~aD 311 (513)
++|.|||+|-||..++..|+..|. +|+++|+++++.+.+.. |.. .+.. ..+.+ .+.++|
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~--g~~--~~~e-~~l~~~l~~~~~~g~l~~~~~~~~aD 77 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR--GEI--HIVE-PDLDMVVKTAVEGGYLRATTTPEPAD 77 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC--CCC--CcCC-CCHHHHHHHHhhcCceeeecccccCC
Confidence 689999999999999999999997 59999999998876432 211 1000 01110 134799
Q ss_pred EEEEcCCCC
Q 010322 312 VVFTSTASE 320 (513)
Q Consensus 312 VVI~AT~s~ 320 (513)
+||.|++.|
T Consensus 78 vvii~vptp 86 (415)
T PRK11064 78 AFLIAVPTP 86 (415)
T ss_pred EEEEEcCCC
Confidence 999999987
No 428
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.15 E-value=0.019 Score=56.72 Aligned_cols=77 Identities=22% Similarity=0.336 Sum_probs=52.2
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcce---eecc-cchHHhhc-CCCcEEEEc
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEI---IYKP-LSEMLSCA-ADADVVFTS 316 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~---~~~~-~~~~~~~l-~~aDVVI~A 316 (513)
...+++|+|+|+ |.+|+.+++.|...|+. |+++.|+.++...+........+ .+.. .+++.+.+ .++|+||.+
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~ 92 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFA-VKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICA 92 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCE-EEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEEC
Confidence 346789999997 99999999999999974 88899998776443322111111 1111 12344455 589999998
Q ss_pred CCCC
Q 010322 317 TASE 320 (513)
Q Consensus 317 T~s~ 320 (513)
++..
T Consensus 93 ~g~~ 96 (251)
T PLN00141 93 TGFR 96 (251)
T ss_pred CCCC
Confidence 8753
No 429
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.15 E-value=0.015 Score=56.53 Aligned_cols=75 Identities=23% Similarity=0.238 Sum_probs=53.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-HHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-ERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
++.|++|+|||.|..|..=++.|...|+. |+|++... .....+.+..+ +.+..-.-..+.+.++++||.||+.+.
T Consensus 9 ~l~~k~VlvvGgG~va~rKa~~ll~~ga~-v~Vvs~~~~~el~~~~~~~~---i~~~~~~~~~~~~~~~~lviaAt~d~~ 84 (210)
T COG1648 9 DLEGKKVLVVGGGSVALRKARLLLKAGAD-VTVVSPEFEPELKALIEEGK---IKWIEREFDAEDLDDAFLVIAATDDEE 84 (210)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhcCCE-EEEEcCCccHHHHHHHHhcC---cchhhcccChhhhcCceEEEEeCCCHH
Confidence 57899999999999999999999999995 88888876 44445544432 122221111223456999999999864
No 430
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.018 Score=57.58 Aligned_cols=75 Identities=16% Similarity=0.128 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc-c-e--eecccchHHhh-------cCCCcE
Q 010322 245 ATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV-E-I--IYKPLSEMLSC-------AADADV 312 (513)
Q Consensus 245 ~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~-~-~--~~~~~~~~~~~-------l~~aDV 312 (513)
.+++++|.|+ |.+|+.+++.|...|++ |++++|++++...+....+.. . + .+...+.+... ....|+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHR-VVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCE-EEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 3678999999 99999999999999985 999999998887776654321 0 1 11111222222 236899
Q ss_pred EEEcCCCC
Q 010322 313 VFTSTASE 320 (513)
Q Consensus 313 VI~AT~s~ 320 (513)
||.+.+..
T Consensus 82 vv~~ag~~ 89 (277)
T PRK06180 82 LVNNAGYG 89 (277)
T ss_pred EEECCCcc
Confidence 99998764
No 431
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=96.13 E-value=0.022 Score=58.76 Aligned_cols=77 Identities=17% Similarity=0.270 Sum_probs=53.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhCCccee-----ecccchHHhhcCCCcEEEEc
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKG-CTKMVVVNRSEERVAAICEELNGVEII-----YKPLSEMLSCAADADVVFTS 316 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G-~~~V~v~nRs~~ra~~la~~~g~~~~~-----~~~~~~~~~~l~~aDVVI~A 316 (513)
+.|++|+|.|+ |.+|+.+++.|...| ..+|++++|+..+...+...+....+. +...+++.+.+.++|+||.+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~ 81 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA 81 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence 36899999998 999999999999886 346999998876654454444221111 12223455667789999998
Q ss_pred CCCC
Q 010322 317 TASE 320 (513)
Q Consensus 317 T~s~ 320 (513)
.+..
T Consensus 82 Ag~~ 85 (324)
T TIGR03589 82 AALK 85 (324)
T ss_pred cccC
Confidence 7653
No 432
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.017 Score=56.76 Aligned_cols=76 Identities=16% Similarity=0.268 Sum_probs=53.5
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceeec--cc---chHHh-------hc
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIYK--PL---SEMLS-------CA 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~~--~~---~~~~~-------~l 307 (513)
.+.+++++|.|+ |++|..+++.|...|++ |++++|++++.+.+.+++.. ....+. +. ++... ..
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAK-VVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 357899999998 99999999999999984 99999998888777665421 011111 11 12221 13
Q ss_pred CCCcEEEEcCCC
Q 010322 308 ADADVVFTSTAS 319 (513)
Q Consensus 308 ~~aDVVI~AT~s 319 (513)
...|++|.+.+.
T Consensus 82 ~~id~li~~ag~ 93 (254)
T PRK07478 82 GGLDIAFNNAGT 93 (254)
T ss_pred CCCCEEEECCCC
Confidence 468999998875
No 433
>PRK09186 flagellin modification protein A; Provisional
Probab=96.13 E-value=0.014 Score=57.28 Aligned_cols=46 Identities=22% Similarity=0.450 Sum_probs=39.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL 290 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~ 290 (513)
+.+++|+|.|+ |.+|+.+++.|...|++ |++++|++++++.+...+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l 48 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGI-VIAADIDKEALNELLESL 48 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecChHHHHHHHHHH
Confidence 36899999998 99999999999999985 899999988876666554
No 434
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.13 E-value=0.044 Score=58.95 Aligned_cols=78 Identities=21% Similarity=0.374 Sum_probs=57.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc---chHH-hhcCCCcEEEEcCC
Q 010322 243 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL---SEML-SCAADADVVFTSTA 318 (513)
Q Consensus 243 ~l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~---~~~~-~~l~~aDVVI~AT~ 318 (513)
....++++|+|+|.+|+.+++.|...|.. |+++++++++.+.+.+.+.+..+..-+. +.+. ..+.++|.||.+|+
T Consensus 228 ~~~~~~iiIiG~G~~g~~l~~~L~~~~~~-v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~ 306 (453)
T PRK09496 228 EKPVKRVMIVGGGNIGYYLAKLLEKEGYS-VKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTN 306 (453)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCe-EEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCC
Confidence 45678999999999999999999998884 9999999998877777643221111111 1222 23578999999998
Q ss_pred CCc
Q 010322 319 SEA 321 (513)
Q Consensus 319 s~~ 321 (513)
...
T Consensus 307 ~~~ 309 (453)
T PRK09496 307 DDE 309 (453)
T ss_pred CcH
Confidence 764
No 435
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.026 Score=55.39 Aligned_cols=74 Identities=20% Similarity=0.294 Sum_probs=51.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceee-----cccchHHhhcC-CCcEEEEc
Q 010322 246 TARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIY-----KPLSEMLSCAA-DADVVFTS 316 (513)
Q Consensus 246 g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~-----~~~~~~~~~l~-~aDVVI~A 316 (513)
+++++|.|+ |.+|+.+++.|...|++ |+++.|++.+...+...... ..+.+ ...+++...+. +.|+||.+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHN-VIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence 468999998 99999999999999985 88899988776665543211 01111 11223333343 79999999
Q ss_pred CCCC
Q 010322 317 TASE 320 (513)
Q Consensus 317 T~s~ 320 (513)
.+..
T Consensus 81 ag~~ 84 (257)
T PRK09291 81 AGIG 84 (257)
T ss_pred CCcC
Confidence 8754
No 436
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.014 Score=58.17 Aligned_cols=47 Identities=23% Similarity=0.408 Sum_probs=39.7
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL 290 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~ 290 (513)
.+.+++++|.|+ |.+|..+++.|...|+. |++++|+++....+.+.+
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~ 53 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGAN-VAVASRSQEKVDAAVAQL 53 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHH
Confidence 367899999999 99999999999999985 999999988766555443
No 437
>PRK14851 hypothetical protein; Provisional
Probab=96.11 E-value=0.012 Score=66.77 Aligned_cols=77 Identities=21% Similarity=0.245 Sum_probs=54.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCC-------------------HHHHHHHHHHh---C-Ccceeec--
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRS-------------------EERVAAICEEL---N-GVEIIYK-- 298 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs-------------------~~ra~~la~~~---g-~~~~~~~-- 298 (513)
+.+.+|+|+|+|++|..++.+|...|+.+++++|.+ ..|++.+++.+ + ...+...
T Consensus 41 L~~~~VlIvG~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~ 120 (679)
T PRK14851 41 LAEAKVAIPGMGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPA 120 (679)
T ss_pred HhcCeEEEECcCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEec
Confidence 468999999999999999999999999999987753 11443344333 1 1122221
Q ss_pred --ccchHHhhcCCCcEEEEcCCCC
Q 010322 299 --PLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 299 --~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
..++..+.+.++|+||+|+-..
T Consensus 121 ~i~~~n~~~~l~~~DvVid~~D~~ 144 (679)
T PRK14851 121 GINADNMDAFLDGVDVVLDGLDFF 144 (679)
T ss_pred CCChHHHHHHHhCCCEEEECCCCC
Confidence 1234566788999999999753
No 438
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=96.10 E-value=0.02 Score=59.01 Aligned_cols=91 Identities=25% Similarity=0.333 Sum_probs=63.8
Q ss_pred CCeEEEEcccHHHH-HHHHHHHHcC--CCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcC--CCcEEEEcCCCC
Q 010322 246 TARMLVIGAGKMGK-LVIKHLVAKG--CTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAA--DADVVFTSTASE 320 (513)
Q Consensus 246 g~~VlVIGaG~mG~-~ia~~L~~~G--~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~--~aDVVI~AT~s~ 320 (513)
..+|+|||+|.++. ..+..+...+ +.-+.+++|+++++++++++++.. ..+.++.+.++ +.|+|+-||+..
T Consensus 3 ~irvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~----~~~~~~~~ll~~~~iD~V~Iatp~~ 78 (342)
T COG0673 3 MIRVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIA----KAYTDLEELLADPDIDAVYIATPNA 78 (342)
T ss_pred eeEEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCC----cccCCHHHHhcCCCCCEEEEcCCCh
Confidence 35899999996664 5777887765 466888999999999999999742 23455666654 479999999987
Q ss_pred ccCCChhhhhcCCchhhhcCCcEEEEec
Q 010322 321 APLFLKDHVQDLPPVEAAVGGLRLFIDI 348 (513)
Q Consensus 321 ~~vi~~~~l~~~~~~~~~~~g~~viiDl 348 (513)
.+. +....+. ..|.-|+++=
T Consensus 79 ~H~---e~~~~AL-----~aGkhVl~EK 98 (342)
T COG0673 79 LHA---ELALAAL-----EAGKHVLCEK 98 (342)
T ss_pred hhH---HHHHHHH-----hcCCEEEEcC
Confidence 553 2222211 1355788773
No 439
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=96.10 E-value=0.016 Score=60.12 Aligned_cols=70 Identities=24% Similarity=0.325 Sum_probs=48.6
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCccee-------------ecccchHHhhcCCCcEE
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEII-------------YKPLSEMLSCAADADVV 313 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~-------------~~~~~~~~~~l~~aDVV 313 (513)
++|+|||+|.||..++..|...|. +|++++|++. .+.+.+ .+. .+. +....+. +.+..+|+|
T Consensus 3 mkI~IiG~G~mG~~~A~~L~~~G~-~V~~~~r~~~-~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~v 77 (341)
T PRK08229 3 ARICVLGAGSIGCYLGGRLAAAGA-DVTLIGRARI-GDELRA-HGL-TLTDYRGRDVRVPPSAIAFSTDP-AALATADLV 77 (341)
T ss_pred ceEEEECCCHHHHHHHHHHHhcCC-cEEEEecHHH-HHHHHh-cCc-eeecCCCcceecccceeEeccCh-hhccCCCEE
Confidence 579999999999999999999997 4999999753 334333 221 100 0011233 456789999
Q ss_pred EEcCCCCc
Q 010322 314 FTSTASEA 321 (513)
Q Consensus 314 I~AT~s~~ 321 (513)
|.|++.+.
T Consensus 78 il~vk~~~ 85 (341)
T PRK08229 78 LVTVKSAA 85 (341)
T ss_pred EEEecCcc
Confidence 99998764
No 440
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.014 Score=58.59 Aligned_cols=77 Identities=13% Similarity=0.212 Sum_probs=54.0
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc--ceeec--cc---chHHhh-------c
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV--EIIYK--PL---SEMLSC-------A 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~--~~~~~--~~---~~~~~~-------l 307 (513)
++.+++++|.|+ |++|+.+++.|...|++ |++++|+.+++.++.+++... .+.+. +. +++.+. .
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~-Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGAR-VVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL 81 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 467899999997 99999999999999995 999999988777666554211 11111 11 222222 2
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|+||++.+..
T Consensus 82 g~id~li~nAg~~ 94 (275)
T PRK05876 82 GHVDVVFSNAGIV 94 (275)
T ss_pred CCCCEEEECCCcC
Confidence 4579999988753
No 441
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.08 E-value=0.013 Score=57.02 Aligned_cols=46 Identities=17% Similarity=0.400 Sum_probs=39.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL 290 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~ 290 (513)
+.+++++|+|+ |.+|..+++.|...|+ +|++++|+..+.....+++
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~ 49 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAEC 49 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHH
Confidence 57899999998 9999999999999998 4999999988776655543
No 442
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.021 Score=56.18 Aligned_cols=74 Identities=18% Similarity=0.372 Sum_probs=52.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceee-----cccchHHhhc-------CCCcE
Q 010322 246 TARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIY-----KPLSEMLSCA-------ADADV 312 (513)
Q Consensus 246 g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~-----~~~~~~~~~l-------~~aDV 312 (513)
+++++|+|+ |.+|+.++..|...|+ +|++++|++++.+.+.+.+....+.+ ...+++...+ ...|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 578999998 9999999999999998 59999999988877776653211111 1112222222 35899
Q ss_pred EEEcCCCC
Q 010322 313 VFTSTASE 320 (513)
Q Consensus 313 VI~AT~s~ 320 (513)
||.+.+..
T Consensus 81 vi~~ag~~ 88 (257)
T PRK07074 81 LVANAGAA 88 (257)
T ss_pred EEECCCCC
Confidence 99998754
No 443
>PRK12742 oxidoreductase; Provisional
Probab=96.08 E-value=0.021 Score=55.26 Aligned_cols=76 Identities=12% Similarity=0.331 Sum_probs=51.5
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEe-CCHHHHHHHHHHhCCcceeecccc---hHHhh---cCCCcEEE
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVN-RSEERVAAICEELNGVEIIYKPLS---EMLSC---AADADVVF 314 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~n-Rs~~ra~~la~~~g~~~~~~~~~~---~~~~~---l~~aDVVI 314 (513)
.+.+++|+|.|+ |.+|+.+++.|...|++ |+++. ++.++.+++..+++.. ....+.. .+.+. ....|++|
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGAN-VRFTYAGSKDAAERLAQETGAT-AVQTDSADRDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHhCCe-EEecCCCCHHHHHHHHHHhCCCcEEE
Confidence 467899999998 99999999999999985 66654 4666776776665421 1111221 22222 24579999
Q ss_pred EcCCCC
Q 010322 315 TSTASE 320 (513)
Q Consensus 315 ~AT~s~ 320 (513)
.+.+..
T Consensus 81 ~~ag~~ 86 (237)
T PRK12742 81 VNAGIA 86 (237)
T ss_pred ECCCCC
Confidence 998754
No 444
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.016 Score=57.34 Aligned_cols=77 Identities=17% Similarity=0.321 Sum_probs=53.9
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC----Ccceeec-----ccchHHh-------
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN----GVEIIYK-----PLSEMLS------- 305 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g----~~~~~~~-----~~~~~~~------- 305 (513)
++.+++++|.|+ |++|..+++.|...|++ |++++|+.++.+...+++. +..+... ..+++.+
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGAS-VAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA 83 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 567999999999 89999999999999995 9999999887766554431 1111111 1122221
Q ss_pred hcCCCcEEEEcCCCC
Q 010322 306 CAADADVVFTSTASE 320 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~ 320 (513)
.....|++|++.+..
T Consensus 84 ~~g~id~li~~Ag~~ 98 (265)
T PRK07062 84 RFGGVDMLVNNAGQG 98 (265)
T ss_pred hcCCCCEEEECCCCC
Confidence 234689999998753
No 445
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.06 E-value=0.022 Score=62.00 Aligned_cols=76 Identities=26% Similarity=0.295 Sum_probs=51.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHH--------------------HHHHHHHHhCCcceeecc--cc-
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEE--------------------RVAAICEELNGVEIIYKP--LS- 301 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~--------------------ra~~la~~~g~~~~~~~~--~~- 301 (513)
.+++|+|||+|++|..++..|...|.. |+++++.+. +..+...++|. .+.... ..
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~-V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv-~~~~~~~v~~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQ-VVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGI-EFHLNCEVGRD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCC-EEECCCEeCCc
Confidence 578999999999999999999999985 999987641 22234445552 211111 01
Q ss_pred -hHHhhcCCCcEEEEcCCCCcc
Q 010322 302 -EMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 302 -~~~~~l~~aDVVI~AT~s~~~ 322 (513)
...+...++|.||.|||+..+
T Consensus 218 ~~~~~~~~~~D~vilAtGa~~~ 239 (467)
T TIGR01318 218 ISLDDLLEDYDAVFLGVGTYRS 239 (467)
T ss_pred cCHHHHHhcCCEEEEEeCCCCC
Confidence 122223479999999999753
No 446
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.019 Score=56.03 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=52.6
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceee--cccc---hHHh-------hc
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIY--KPLS---EMLS-------CA 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~--~~~~---~~~~-------~l 307 (513)
.+.+++++|.|+ |.+|..++++|...|+ +|++++|+......+.+.+.. ..... .+.. ++.. ..
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF 81 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 457899999999 9999999999999998 599999998766555554311 01111 1111 2211 12
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|+||.+++..
T Consensus 82 ~~id~vi~~ag~~ 94 (250)
T PRK07774 82 GGIDYLVNNAAIY 94 (250)
T ss_pred CCCCEEEECCCCc
Confidence 4689999998853
No 447
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.03 E-value=0.022 Score=55.44 Aligned_cols=78 Identities=18% Similarity=0.259 Sum_probs=52.5
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceeec--cc---chHHhh-------c
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIYK--PL---SEMLSC-------A 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~~--~~---~~~~~~-------l 307 (513)
.+.+++++|.|+ |.+|..+++.|...|+ +|+++.|+.++...+...+.. ..+.+. +. +++.+. .
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 356889999997 9999999999999998 599999997766555444321 111111 11 122222 2
Q ss_pred CCCcEEEEcCCCCc
Q 010322 308 ADADVVFTSTASEA 321 (513)
Q Consensus 308 ~~aDVVI~AT~s~~ 321 (513)
..+|+||.+.+...
T Consensus 82 ~~~d~vi~~ag~~~ 95 (251)
T PRK12826 82 GRLDILVANAGIFP 95 (251)
T ss_pred CCCCEEEECCCCCC
Confidence 36899999986643
No 448
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.03 E-value=0.022 Score=55.96 Aligned_cols=72 Identities=19% Similarity=0.366 Sum_probs=51.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeec-----ccchHHh-------hcCCCcEE
Q 010322 247 ARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYK-----PLSEMLS-------CAADADVV 313 (513)
Q Consensus 247 ~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~-----~~~~~~~-------~l~~aDVV 313 (513)
++++|+|+ |.+|..+++.|...|+ +|++++|+++++..+...++. .+.+. ..+++.+ ...+.|+|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGD-NLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcc-ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46899998 9999999999999998 499999999888777665542 11111 1122222 23478999
Q ss_pred EEcCCCC
Q 010322 314 FTSTASE 320 (513)
Q Consensus 314 I~AT~s~ 320 (513)
|.+.+..
T Consensus 79 i~~ag~~ 85 (248)
T PRK10538 79 VNNAGLA 85 (248)
T ss_pred EECCCcc
Confidence 9998753
No 449
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.02 E-value=0.016 Score=56.12 Aligned_cols=46 Identities=30% Similarity=0.470 Sum_probs=39.1
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL 290 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~ 290 (513)
+.+++++|.|+ |.+|..+++.|..+|.. |++++|++++...+...+
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~ 49 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAK-VVIYDSNEEAAEALAAEL 49 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHH
Confidence 46789999998 99999999999999986 999999988766555443
No 450
>PRK05225 ketol-acid reductoisomerase; Validated
Probab=96.02 E-value=0.007 Score=64.81 Aligned_cols=71 Identities=15% Similarity=0.173 Sum_probs=51.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-----HHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCC
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-----ERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTA 318 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-----~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~ 318 (513)
+.|++|+|||+|.+|.+.+..|+..|+. |++.-|.. .+..+.|.+-| . ...++.++++.||+|+..||
T Consensus 34 LkgKtIaIIGyGSqG~AqAlNLrdSGvn-Vvvglr~~~id~~~~s~~kA~~dG---F---~v~~~~Ea~~~ADvVviLlP 106 (487)
T PRK05225 34 LKGKKIVIVGCGAQGLNQGLNMRDSGLD-ISYALRKEAIAEKRASWRKATENG---F---KVGTYEELIPQADLVINLTP 106 (487)
T ss_pred hCCCEEEEEccCHHHHHHhCCCccccce-eEEeccccccccccchHHHHHhcC---C---ccCCHHHHHHhCCEEEEcCC
Confidence 5799999999999999999999999995 77555542 11222233322 1 22457777899999999998
Q ss_pred CCc
Q 010322 319 SEA 321 (513)
Q Consensus 319 s~~ 321 (513)
...
T Consensus 107 Dt~ 109 (487)
T PRK05225 107 DKQ 109 (487)
T ss_pred hHH
Confidence 863
No 451
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=96.00 E-value=0.026 Score=58.03 Aligned_cols=74 Identities=19% Similarity=0.268 Sum_probs=50.2
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC------CcceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN------GVEIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g------~~~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
++|.|||+|.||..++..+...|..+|+++|++.+.+...+..+. .....+....+..+ +.++|+||-|.|.|
T Consensus 2 ~KV~VIGaG~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~p 80 (305)
T TIGR01763 2 KKISVIGAGFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGLP 80 (305)
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCCC
Confidence 479999999999999999999876469999997654432221110 00112222244444 78999999998876
Q ss_pred c
Q 010322 321 A 321 (513)
Q Consensus 321 ~ 321 (513)
.
T Consensus 81 ~ 81 (305)
T TIGR01763 81 R 81 (305)
T ss_pred C
Confidence 4
No 452
>PRK07109 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.021 Score=59.22 Aligned_cols=77 Identities=17% Similarity=0.302 Sum_probs=54.7
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC--Ccceee-----cccchHHh-------hc
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN--GVEIIY-----KPLSEMLS-------CA 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g--~~~~~~-----~~~~~~~~-------~l 307 (513)
.+.+++|+|.|+ |++|+.+++.|...|++ |++++|+.++++++.+++. +..+.+ ...+++.+ .+
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~-Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAK-VVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL 83 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence 467899999998 99999999999999984 9999999988877666542 111111 11122222 23
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|++|++.+..
T Consensus 84 g~iD~lInnAg~~ 96 (334)
T PRK07109 84 GPIDTWVNNAMVT 96 (334)
T ss_pred CCCCEEEECCCcC
Confidence 4789999998753
No 453
>PRK09242 tropinone reductase; Provisional
Probab=95.98 E-value=0.016 Score=57.15 Aligned_cols=76 Identities=14% Similarity=0.242 Sum_probs=54.1
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC----Ccceeec--cc---chH-------Hh
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN----GVEIIYK--PL---SEM-------LS 305 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g----~~~~~~~--~~---~~~-------~~ 305 (513)
.+.+++++|+|+ |.+|..+++.|...|++ |++++|+.++.+.+..++. +..+... +. +++ .+
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFLGLGAD-VLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED 84 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 467899999998 99999999999999984 9999999888776665542 1111111 11 111 22
Q ss_pred hcCCCcEEEEcCCC
Q 010322 306 CAADADVVFTSTAS 319 (513)
Q Consensus 306 ~l~~aDVVI~AT~s 319 (513)
.....|+||.+.+.
T Consensus 85 ~~g~id~li~~ag~ 98 (257)
T PRK09242 85 HWDGLHILVNNAGG 98 (257)
T ss_pred HcCCCCEEEECCCC
Confidence 24578999999875
No 454
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=95.97 E-value=0.019 Score=65.78 Aligned_cols=39 Identities=23% Similarity=0.376 Sum_probs=34.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVA 284 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~ 284 (513)
.-++|.|||+|.||..++..+...|.. |++++++++.++
T Consensus 312 ~i~~v~ViGaG~mG~gIA~~~a~~G~~-V~l~d~~~~~l~ 350 (714)
T TIGR02437 312 DVKQAAVLGAGIMGGGIAYQSASKGTP-IVMKDINQHSLD 350 (714)
T ss_pred ccceEEEECCchHHHHHHHHHHhCCCe-EEEEeCCHHHHH
Confidence 346899999999999999999999985 999999987653
No 455
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.96 E-value=0.039 Score=54.39 Aligned_cols=76 Identities=14% Similarity=0.323 Sum_probs=52.7
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceeec--ccc---hHHh-------hc
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIYK--PLS---EMLS-------CA 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~~--~~~---~~~~-------~l 307 (513)
.+.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++.+.+.+.+.. ....+. +.. ++.. ..
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF 87 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 467899999998 9999999999999998 599999998877665544321 011111 111 2211 12
Q ss_pred CCCcEEEEcCCC
Q 010322 308 ADADVVFTSTAS 319 (513)
Q Consensus 308 ~~aDVVI~AT~s 319 (513)
...|+||.+++.
T Consensus 88 ~~id~vi~~ag~ 99 (259)
T PRK08213 88 GHVDILVNNAGA 99 (259)
T ss_pred CCCCEEEECCCC
Confidence 468999999875
No 456
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.96 E-value=0.04 Score=53.41 Aligned_cols=76 Identities=20% Similarity=0.287 Sum_probs=54.5
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeec--c---cchHHh-------hcCC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYK--P---LSEMLS-------CAAD 309 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~--~---~~~~~~-------~l~~ 309 (513)
++.+++++|.|+ |.+|+.+++.|...|+ .|++.+|+.++.+.+...++. .+.+. + .+++.+ ....
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGE-RVKIFPANLSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCC-ceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 457899999997 9999999999999998 588889998888777665542 11211 1 122222 1346
Q ss_pred CcEEEEcCCCC
Q 010322 310 ADVVFTSTASE 320 (513)
Q Consensus 310 aDVVI~AT~s~ 320 (513)
.|+||.+.+..
T Consensus 81 id~vi~~ag~~ 91 (245)
T PRK12936 81 VDILVNNAGIT 91 (245)
T ss_pred CCEEEECCCCC
Confidence 89999998764
No 457
>PLN02602 lactate dehydrogenase
Probab=95.96 E-value=0.023 Score=59.55 Aligned_cols=73 Identities=11% Similarity=0.315 Sum_probs=53.5
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhCCc-----ceeecccchHHhhcCCCcEEEEcCCCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKGC-TKMVVVNRSEERVAAICEELNGV-----EIIYKPLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G~-~~V~v~nRs~~ra~~la~~~g~~-----~~~~~~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
.+|.|||+|.+|..++..|...|. .++.++|.+.+++...+..+... ...+....+ .+.+++||+||-+.|.+
T Consensus 38 ~KI~IIGaG~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~d-y~~~~daDiVVitAG~~ 116 (350)
T PLN02602 38 TKVSVVGVGNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTD-YAVTAGSDLCIVTAGAR 116 (350)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCC-HHHhCCCCEEEECCCCC
Confidence 699999999999999999998876 57999999887776555554321 012211123 34478999999998875
No 458
>PRK14852 hypothetical protein; Provisional
Probab=95.95 E-value=0.015 Score=67.68 Aligned_cols=77 Identities=14% Similarity=0.198 Sum_probs=54.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCC-------------------HHHHHHHHHHh---C-Ccceeec--
Q 010322 244 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRS-------------------EERVAAICEEL---N-GVEIIYK-- 298 (513)
Q Consensus 244 l~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs-------------------~~ra~~la~~~---g-~~~~~~~-- 298 (513)
+...+|+|+|+|++|..++.+|...|+.+|+++|-+ ..|++.+++.+ + ...+.+.
T Consensus 330 L~~srVlVvGlGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~~ 409 (989)
T PRK14852 330 LLRSRVAIAGLGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFPE 409 (989)
T ss_pred HhcCcEEEECCcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEec
Confidence 578999999999999999999999999999987653 11443344333 2 1122222
Q ss_pred --ccchHHhhcCCCcEEEEcCCCC
Q 010322 299 --PLSEMLSCAADADVVFTSTASE 320 (513)
Q Consensus 299 --~~~~~~~~l~~aDVVI~AT~s~ 320 (513)
..++..+.+.++|+||+|+-..
T Consensus 410 ~I~~en~~~fl~~~DiVVDa~D~~ 433 (989)
T PRK14852 410 GVAAETIDAFLKDVDLLVDGIDFF 433 (989)
T ss_pred CCCHHHHHHHhhCCCEEEECCCCc
Confidence 1234666788999999998753
No 459
>PRK08264 short chain dehydrogenase; Validated
Probab=95.95 E-value=0.013 Score=56.80 Aligned_cols=71 Identities=21% Similarity=0.377 Sum_probs=50.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceee-----cccchHHhh---cCCCcEEE
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIY-----KPLSEMLSC---AADADVVF 314 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~-----~~~~~~~~~---l~~aDVVI 314 (513)
+.+++++|+|+ |.+|+.+++.|...|+.+|+++.|+.++... .+. .+.+ ...+++.+. ....|+||
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~-~~~~~~~D~~~~~~~~~~~~~~~~id~vi 78 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGP-RVVPLQLDVTDPASVAAAAEAASDVTILV 78 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCC-ceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence 46789999997 9999999999999998569999999876543 221 1111 112233332 33579999
Q ss_pred EcCCC
Q 010322 315 TSTAS 319 (513)
Q Consensus 315 ~AT~s 319 (513)
.+.+.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 99876
No 460
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.027 Score=56.09 Aligned_cols=76 Identities=25% Similarity=0.390 Sum_probs=52.6
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC----cceeec--cc---chHHhhc-----
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG----VEIIYK--PL---SEMLSCA----- 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~----~~~~~~--~~---~~~~~~l----- 307 (513)
.+.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++...+.+.+.. ..+.+. +. +++...+
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA 82 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 357899999998 9999999999999998 599999998776655554321 111111 11 2222222
Q ss_pred --CCCcEEEEcCCC
Q 010322 308 --ADADVVFTSTAS 319 (513)
Q Consensus 308 --~~aDVVI~AT~s 319 (513)
...|+||.+.+.
T Consensus 83 ~~~~~d~li~~ag~ 96 (276)
T PRK05875 83 WHGRLHGVVHCAGG 96 (276)
T ss_pred HcCCCCEEEECCCc
Confidence 368999999874
No 461
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.95 E-value=0.018 Score=56.67 Aligned_cols=47 Identities=26% Similarity=0.344 Sum_probs=40.6
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL 290 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~ 290 (513)
.+.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.+....+..++
T Consensus 8 ~~~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~ 55 (256)
T PRK06124 8 SLAGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAAL 55 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHH
Confidence 578999999999 9999999999999998 5999999988776665543
No 462
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=95.94 E-value=0.021 Score=61.39 Aligned_cols=73 Identities=16% Similarity=0.216 Sum_probs=50.4
Q ss_pred eEEEEcccHHHHHHHH--HHH---HcCCCeEEEEeCCHHHHHHHHHHhC------CcceeecccchHHhhcCCCcEEEEc
Q 010322 248 RMLVIGAGKMGKLVIK--HLV---AKGCTKMVVVNRSEERVAAICEELN------GVEIIYKPLSEMLSCAADADVVFTS 316 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~--~L~---~~G~~~V~v~nRs~~ra~~la~~~g------~~~~~~~~~~~~~~~l~~aDVVI~A 316 (513)
+|.|||+|.+|...+. .+. .....+|.++|+++++++....... .....+....++.+++.+||+||.+
T Consensus 2 KIaIIGaGs~G~a~a~~~~i~~~~~~~g~eV~L~Did~e~l~~~~~~~~~~~~~~~~~~~I~~ttD~~eal~~AD~Vi~a 81 (423)
T cd05297 2 KIAFIGAGSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEILAKKIVEELGAPLKIEATTDRREALDGADFVINT 81 (423)
T ss_pred eEEEECCChHHhHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHHhcCCCEEEEe
Confidence 6999999999997554 343 2222479999999988765544321 1112343456778889999999999
Q ss_pred CCCC
Q 010322 317 TASE 320 (513)
Q Consensus 317 T~s~ 320 (513)
.+++
T Consensus 82 i~~~ 85 (423)
T cd05297 82 IQVG 85 (423)
T ss_pred eEec
Confidence 9863
No 463
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.017 Score=57.08 Aligned_cols=74 Identities=15% Similarity=0.314 Sum_probs=51.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc-ceeec--cc---chHHhh-------cCCCc
Q 010322 246 TARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV-EIIYK--PL---SEMLSC-------AADAD 311 (513)
Q Consensus 246 g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~-~~~~~--~~---~~~~~~-------l~~aD 311 (513)
+++|+|.|+ |.+|+.+++.|...|+ +|++++|+.++..++.+.+... .+.+. +. +++.+. ....|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 478999997 9999999999999998 5999999998887776654321 11111 11 222222 23479
Q ss_pred EEEEcCCCC
Q 010322 312 VVFTSTASE 320 (513)
Q Consensus 312 VVI~AT~s~ 320 (513)
++|++.+..
T Consensus 81 ~lv~~ag~~ 89 (257)
T PRK07024 81 VVIANAGIS 89 (257)
T ss_pred EEEECCCcC
Confidence 999998754
No 464
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.041 Score=56.47 Aligned_cols=77 Identities=14% Similarity=0.257 Sum_probs=54.0
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh----CCcceeec--cc---chHHh-------
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL----NGVEIIYK--PL---SEMLS------- 305 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~----g~~~~~~~--~~---~~~~~------- 305 (513)
++.|++++|.|+ |+||..+++.|...|+ +|+++.|+.++.++..+++ ++..+.+. +. +++.+
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 578999999998 9999999999999998 5999999988876655543 11112211 12 22221
Q ss_pred hcCCCcEEEEcCCCC
Q 010322 306 CAADADVVFTSTASE 320 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~ 320 (513)
.....|++|++.+..
T Consensus 90 ~~~~iD~li~nAG~~ 104 (313)
T PRK05854 90 EGRPIHLLINNAGVM 104 (313)
T ss_pred hCCCccEEEECCccc
Confidence 124689999987753
No 465
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.90 E-value=0.023 Score=58.36 Aligned_cols=76 Identities=18% Similarity=0.266 Sum_probs=53.8
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceeec--cc---chHHhhc-------
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIYK--PL---SEMLSCA------- 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~~--~~---~~~~~~l------- 307 (513)
...+++++|.|+ |.||..+++.|...|+ +|++++|+.++++++.+++.. ..+.+. +. +++.+.+
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 3 QDAKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG 81 (322)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 346899999998 9999999999999997 599999999888777666531 111111 12 2222222
Q ss_pred CCCcEEEEcCCC
Q 010322 308 ADADVVFTSTAS 319 (513)
Q Consensus 308 ~~aDVVI~AT~s 319 (513)
...|+||++.+.
T Consensus 82 ~~iD~li~nAg~ 93 (322)
T PRK07453 82 KPLDALVCNAAV 93 (322)
T ss_pred CCccEEEECCcc
Confidence 258999999874
No 466
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=95.90 E-value=0.026 Score=59.02 Aligned_cols=76 Identities=20% Similarity=0.154 Sum_probs=49.7
Q ss_pred CeEEEEcccHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhCCc-------------ceeecccchHHhhcCCCcE
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAK-GCTKMVVVNRSEERVAAICEELNGV-------------EIIYKPLSEMLSCAADADV 312 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~-G~~~V~v~nRs~~ra~~la~~~g~~-------------~~~~~~~~~~~~~l~~aDV 312 (513)
.+|.|+|+|.||+.+++.+... +++=+.+++++++....++..+|-. ...+....+..+.+.++|+
T Consensus 2 ikVaI~G~GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~vDV 81 (341)
T PRK04207 2 IKVGVNGYGTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKADI 81 (341)
T ss_pred eEEEEECCCHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccCCE
Confidence 3799999999999999988865 4554556666766666666644310 0001112234455578999
Q ss_pred EEEcCCCCcc
Q 010322 313 VFTSTASEAP 322 (513)
Q Consensus 313 VI~AT~s~~~ 322 (513)
||+||+....
T Consensus 82 VIdaT~~~~~ 91 (341)
T PRK04207 82 VVDATPGGVG 91 (341)
T ss_pred EEECCCchhh
Confidence 9999987644
No 467
>KOG2380 consensus Prephenate dehydrogenase (NADP+) [Amino acid transport and metabolism]
Probab=95.90 E-value=0.026 Score=58.00 Aligned_cols=70 Identities=24% Similarity=0.434 Sum_probs=53.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
+..+|.|||.|.||+..+..|..+|.. +..++|+. -..+++.+|.. .+....|+-+ +..|+|+-||...+
T Consensus 51 ~tl~IaIIGfGnmGqflAetli~aGh~-li~hsRsd--yssaa~~yg~~--~ft~lhdlce--rhpDvvLlctsils 120 (480)
T KOG2380|consen 51 ATLVIAIIGFGNMGQFLAETLIDAGHG-LICHSRSD--YSSAAEKYGSA--KFTLLHDLCE--RHPDVVLLCTSILS 120 (480)
T ss_pred cceEEEEEecCcHHHHHHHHHHhcCce-eEecCcch--hHHHHHHhccc--ccccHHHHHh--cCCCEEEEEehhhh
Confidence 346899999999999999999999985 88999986 45778888753 2222333322 57999999998754
No 468
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=95.90 E-value=0.021 Score=58.86 Aligned_cols=74 Identities=20% Similarity=0.354 Sum_probs=50.0
Q ss_pred eEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCH-------------------HHHHHHHHHhCCc--ceeeccc----ch
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSE-------------------ERVAAICEELNGV--EIIYKPL----SE 302 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~-------------------~ra~~la~~~g~~--~~~~~~~----~~ 302 (513)
+|+|+|+|++|..+++.|...|+.+|+++|.+. .|++..++.+... .+.+... .+
T Consensus 1 kVlIVGaGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~ 80 (312)
T cd01489 1 KVLVVGAGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD 80 (312)
T ss_pred CEEEECCCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence 589999999999999999999999999988531 2443434333210 1122111 11
Q ss_pred ---HHhhcCCCcEEEEcCCCCc
Q 010322 303 ---MLSCAADADVVFTSTASEA 321 (513)
Q Consensus 303 ---~~~~l~~aDVVI~AT~s~~ 321 (513)
..+.+.++|+||+|+-+..
T Consensus 81 ~~~~~~f~~~~DvVv~a~Dn~~ 102 (312)
T cd01489 81 PDFNVEFFKQFDLVFNALDNLA 102 (312)
T ss_pred ccchHHHHhcCCEEEECCCCHH
Confidence 2355789999999987654
No 469
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.054 Score=53.42 Aligned_cols=77 Identities=25% Similarity=0.462 Sum_probs=53.9
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC---Ccceeec--cc---chHH---hhcCCC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN---GVEIIYK--PL---SEML---SCAADA 310 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g---~~~~~~~--~~---~~~~---~~l~~a 310 (513)
++.+++++|.|+ |++|+.+++.|...|+ +|++++|+.++.+.+.+++. +..+.+. +. +++. +.....
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 82 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDI 82 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCC
Confidence 357899999999 8999999999999999 69999999888766655442 1111111 11 1222 224578
Q ss_pred cEEEEcCCCC
Q 010322 311 DVVFTSTASE 320 (513)
Q Consensus 311 DVVI~AT~s~ 320 (513)
|++|.+.+..
T Consensus 83 d~lv~~ag~~ 92 (259)
T PRK06125 83 DILVNNAGAI 92 (259)
T ss_pred CEEEECCCCC
Confidence 9999987653
No 470
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.89 E-value=0.049 Score=53.29 Aligned_cols=47 Identities=23% Similarity=0.453 Sum_probs=40.3
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL 290 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~ 290 (513)
.+.+++|+|.|+ |.+|..+++.|...|+ +|++++|+.++...+..++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l 56 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEI 56 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHH
Confidence 357899999998 9999999999999998 5999999988776666554
No 471
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=95.88 E-value=0.041 Score=53.60 Aligned_cols=70 Identities=23% Similarity=0.442 Sum_probs=50.2
Q ss_pred EEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHH--HHHHHHHhCCcceeeccc---chHHhhcCCCcEEEEcCCCCc
Q 010322 249 MLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEER--VAAICEELNGVEIIYKPL---SEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 249 VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~r--a~~la~~~g~~~~~~~~~---~~~~~~l~~aDVVI~AT~s~~ 321 (513)
|+|+|+ |.+|+.++..|...|.+ |.+..|+... +..+. ..|. .+...++ +.+.+++.++|+||.+++...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~-V~~l~R~~~~~~~~~l~-~~g~-~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~ 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFS-VRALVRDPSSDRAQQLQ-ALGA-EVVEADYDDPESLVAALKGVDAVFSVTPPSH 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGC-EEEEESSSHHHHHHHHH-HTTT-EEEES-TT-HHHHHHHHTTCSEEEEESSCSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCC-cEEEEeccchhhhhhhh-cccc-eEeecccCCHHHHHHHHcCCceEEeecCcch
Confidence 789998 99999999999998875 9998997643 33333 2343 2222233 456678899999999999653
No 472
>PRK08589 short chain dehydrogenase; Validated
Probab=95.88 E-value=0.04 Score=55.05 Aligned_cols=76 Identities=14% Similarity=0.220 Sum_probs=52.1
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceeec--c---cchHHh-------hc
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIYK--P---LSEMLS-------CA 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~~--~---~~~~~~-------~l 307 (513)
.+.+++++|.|+ |++|+.+++.|...|++ |++++|+ ++..++.+++.. ..+... + .+++.. ..
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~-vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAY-VLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF 80 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 467899999999 99999999999999984 9999999 666666555421 011111 1 112221 23
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|++|++.+..
T Consensus 81 g~id~li~~Ag~~ 93 (272)
T PRK08589 81 GRVDVLFNNAGVD 93 (272)
T ss_pred CCcCEEEECCCCC
Confidence 4689999998753
No 473
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.88 E-value=0.024 Score=55.04 Aligned_cols=76 Identities=18% Similarity=0.325 Sum_probs=51.5
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEE-eCCHHHHHHHHHHhCC--cceeec--cc---chHHhh-------c
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVV-NRSEERVAAICEELNG--VEIIYK--PL---SEMLSC-------A 307 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~-nRs~~ra~~la~~~g~--~~~~~~--~~---~~~~~~-------l 307 (513)
+.+++++|+|+ |.+|..+++.|...|++ |+++ +|+.++...+...+.. ..+.+. +. +++.+. .
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAK-VVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 56789999998 99999999999999985 7777 9988777665554321 111111 12 122222 2
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|+||.+.+..
T Consensus 82 ~~id~vi~~ag~~ 94 (247)
T PRK05565 82 GKIDILVNNAGIS 94 (247)
T ss_pred CCCCEEEECCCcC
Confidence 3689999987654
No 474
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=95.87 E-value=0.061 Score=54.05 Aligned_cols=156 Identities=15% Similarity=0.106 Sum_probs=84.8
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCccccccccccC-CCchHHHH
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAA-GAVSVSSA 230 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~~-~~~Sva~~ 230 (513)
...|+|+++.+..++++++...+|+..+...- . ..-..|....+...--...+.+++.+........ .+...++.
T Consensus 59 ~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-~---~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~ 134 (326)
T cd08272 59 AILGCDVAGVVEAVGEGVTRFRVGDEVYGCAG-G---LGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWE 134 (326)
T ss_pred cccccceeEEEEEeCCCCCCCCCCCEEEEccC-C---cCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHH
Confidence 35799999999999998888888988764210 0 0000111111111101112223332222211110 01112222
Q ss_pred HHHHHHhhCCCCCCCCCeEEEEc-ccHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeeccc----chHHh
Q 010322 231 AVELALMKLPESSHATARMLVIG-AGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPL----SEMLS 305 (513)
Q Consensus 231 Av~la~~~~~~~~l~g~~VlVIG-aG~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~----~~~~~ 305 (513)
++. . .. ....|.+++|.| +|.+|.+++..+...|++ |+++.++ ++.. ++..++.. ..+... ..+..
T Consensus 135 ~l~---~-~~-~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~~-~~~~-~~~~~g~~-~~~~~~~~~~~~~~~ 205 (326)
T cd08272 135 GLV---D-RA-AVQAGQTVLIHGGAGGVGHVAVQLAKAAGAR-VYATASS-EKAA-FARSLGAD-PIIYYRETVVEYVAE 205 (326)
T ss_pred HHH---H-hc-CCCCCCEEEEEcCCCcHHHHHHHHHHHcCCE-EEEEech-HHHH-HHHHcCCC-EEEecchhHHHHHHH
Confidence 211 1 11 234689999999 599999999999999986 7777777 7764 44666642 111111 11122
Q ss_pred hc--CCCcEEEEcCCCC
Q 010322 306 CA--ADADVVFTSTASE 320 (513)
Q Consensus 306 ~l--~~aDVVI~AT~s~ 320 (513)
.. .++|++++|+++.
T Consensus 206 ~~~~~~~d~v~~~~~~~ 222 (326)
T cd08272 206 HTGGRGFDVVFDTVGGE 222 (326)
T ss_pred hcCCCCCcEEEECCChH
Confidence 22 3689999999874
No 475
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.021 Score=58.08 Aligned_cols=77 Identities=18% Similarity=0.302 Sum_probs=52.7
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC----Ccceeec--cc---chHHh-------
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN----GVEIIYK--PL---SEMLS------- 305 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g----~~~~~~~--~~---~~~~~------- 305 (513)
++.+++|+|.|+ |.+|..+++.|...|+ +|+++.|+.++.....+.+. +..+.+. +. +++..
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 567899999998 9999999999999998 58999999887655443331 1111111 11 12222
Q ss_pred hcCCCcEEEEcCCCC
Q 010322 306 CAADADVVFTSTASE 320 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~ 320 (513)
.....|+||.+.+..
T Consensus 92 ~~~~iD~li~nAg~~ 106 (306)
T PRK06197 92 AYPRIDLLINNAGVM 106 (306)
T ss_pred hCCCCCEEEECCccc
Confidence 124689999998753
No 476
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.86 E-value=0.031 Score=59.83 Aligned_cols=77 Identities=16% Similarity=0.274 Sum_probs=52.6
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC-c-ce--eecccchHHhhcCCCcEEEEcC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG-V-EI--IYKPLSEMLSCAADADVVFTST 317 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~-~-~~--~~~~~~~~~~~l~~aDVVI~AT 317 (513)
.+.+++|+|.|+ |.+|+.+++.|...|++ |++++|+.++........+. . .+ .+...+++.+.+.+.|++|++.
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~-Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnA 253 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAK-VVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINH 253 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECC
Confidence 357899999999 99999999999999984 88889987665332221111 0 01 1112233455567899999987
Q ss_pred CCC
Q 010322 318 ASE 320 (513)
Q Consensus 318 ~s~ 320 (513)
|..
T Consensus 254 Gi~ 256 (406)
T PRK07424 254 GIN 256 (406)
T ss_pred CcC
Confidence 653
No 477
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.85 E-value=0.025 Score=59.69 Aligned_cols=77 Identities=17% Similarity=0.187 Sum_probs=53.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC------CeEEEEeCCHHH-----HHHHHHHh------CCcc--eeecccchHHh
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKGC------TKMVVVNRSEER-----VAAICEEL------NGVE--IIYKPLSEMLS 305 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G~------~~V~v~nRs~~r-----a~~la~~~------g~~~--~~~~~~~~~~~ 305 (513)
...+|.|||+|.+|.+++..|...|. .+|.+|.|+++. .+.+.... ++.. -.+....++.+
T Consensus 10 ~~~ki~ViGaG~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl~e 89 (365)
T PTZ00345 10 GPLKVSVIGSGNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDLKE 89 (365)
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEecCHHH
Confidence 34689999999999999999998872 479999998752 33333221 1100 01122356677
Q ss_pred hcCCCcEEEEcCCCCc
Q 010322 306 CAADADVVFTSTASEA 321 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~~ 321 (513)
++.++|+||.|+++..
T Consensus 90 av~~aDiIvlAVPsq~ 105 (365)
T PTZ00345 90 AVEDADLLIFVIPHQF 105 (365)
T ss_pred HHhcCCEEEEEcChHH
Confidence 7889999999998853
No 478
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.85 E-value=0.025 Score=64.19 Aligned_cols=76 Identities=25% Similarity=0.319 Sum_probs=51.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHH--------------------HHHHHHHHhCCcceeecc---cc
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEE--------------------RVAAICEELNGVEIIYKP---LS 301 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~--------------------ra~~la~~~g~~~~~~~~---~~ 301 (513)
.+++|+|||+|+.|..+|..|...|.+ |+|+++.+. +..+..+.+|. .+.... .+
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~~-V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv-~~~~~~~v~~~ 403 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGVA-VTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGI-EFELNCEVGKD 403 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCe-EEECCCEeCCc
Confidence 588999999999999999999999985 999988532 11233344442 111100 01
Q ss_pred -hHHhhcCCCcEEEEcCCCCcc
Q 010322 302 -EMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 302 -~~~~~l~~aDVVI~AT~s~~~ 322 (513)
.+.....++|.||.|||+..+
T Consensus 404 i~~~~~~~~~DavilAtGa~~~ 425 (654)
T PRK12769 404 ISLESLLEDYDAVFVGVGTYRS 425 (654)
T ss_pred CCHHHHHhcCCEEEEeCCCCCC
Confidence 222333579999999998654
No 479
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.84 E-value=0.025 Score=64.07 Aligned_cols=76 Identities=20% Similarity=0.248 Sum_probs=51.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHH--------------------HHHHHHHHhCCcceeecc---cc
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEE--------------------RVAAICEELNGVEIIYKP---LS 301 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~--------------------ra~~la~~~g~~~~~~~~---~~ 301 (513)
.+++|+|||+|++|..++..|...|.+ |+++++.+. +..++...+|. .+.+.. .+
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~-Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv-~~~~~~~v~~~ 386 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQ-VDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGI-DFHLNCEIGRD 386 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCc-EEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCe-EEEcCCccCCc
Confidence 489999999999999999999999985 999988752 11233344442 111111 01
Q ss_pred -hHHhhcCCCcEEEEcCCCCcc
Q 010322 302 -EMLSCAADADVVFTSTASEAP 322 (513)
Q Consensus 302 -~~~~~l~~aDVVI~AT~s~~~ 322 (513)
.+.+...++|.||.|||+..+
T Consensus 387 ~~~~~l~~~~DaV~latGa~~~ 408 (639)
T PRK12809 387 ITFSDLTSEYDAVFIGVGTYGM 408 (639)
T ss_pred CCHHHHHhcCCEEEEeCCCCCC
Confidence 223334579999999999654
No 480
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=95.84 E-value=0.023 Score=59.34 Aligned_cols=74 Identities=16% Similarity=0.236 Sum_probs=50.4
Q ss_pred eEEEEcccHHHHHHHHHHHHcCC-------CeEEEEeC-----CHHHHHHHHHHhCCc----cee----ecccchHHhhc
Q 010322 248 RMLVIGAGKMGKLVIKHLVAKGC-------TKMVVVNR-----SEERVAAICEELNGV----EII----YKPLSEMLSCA 307 (513)
Q Consensus 248 ~VlVIGaG~mG~~ia~~L~~~G~-------~~V~v~nR-----s~~ra~~la~~~g~~----~~~----~~~~~~~~~~l 307 (513)
+|.|||+|..|.+++..|...|. .+|++|.| +.+-.+.+....... .+. +....++.+++
T Consensus 1 kI~VIGaG~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~eal 80 (342)
T TIGR03376 1 RVAVVGSGNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEAA 80 (342)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHHHHH
Confidence 58999999999999999998771 46999998 433333333221110 011 11235677888
Q ss_pred CCCcEEEEcCCCCc
Q 010322 308 ADADVVFTSTASEA 321 (513)
Q Consensus 308 ~~aDVVI~AT~s~~ 321 (513)
.++|+||.|+|+..
T Consensus 81 ~~ADiIIlAVPs~~ 94 (342)
T TIGR03376 81 KGADILVFVIPHQF 94 (342)
T ss_pred hcCCEEEEECChHH
Confidence 99999999999853
No 481
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.021 Score=56.46 Aligned_cols=76 Identities=21% Similarity=0.357 Sum_probs=53.2
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC-cceeec--cc---chHHhh------cCCC
Q 010322 244 HATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG-VEIIYK--PL---SEMLSC------AADA 310 (513)
Q Consensus 244 l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~-~~~~~~--~~---~~~~~~------l~~a 310 (513)
+.+++++|+|+ |.+|..+++.|...|++ |++++|+.++...+..++.. ..+.+. +. +++.+. ....
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGAR-LLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGI 81 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence 46889999997 99999999999999985 99999998887777655311 011111 11 121111 3568
Q ss_pred cEEEEcCCCC
Q 010322 311 DVVFTSTASE 320 (513)
Q Consensus 311 DVVI~AT~s~ 320 (513)
|+||.+.+..
T Consensus 82 d~lv~~ag~~ 91 (263)
T PRK09072 82 NVLINNAGVN 91 (263)
T ss_pred CEEEECCCCC
Confidence 9999998764
No 482
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.059 Score=52.82 Aligned_cols=76 Identities=17% Similarity=0.261 Sum_probs=51.3
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeec-----ccchHHhh-------cCC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYK-----PLSEMLSC-------AAD 309 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~-----~~~~~~~~-------l~~ 309 (513)
++.+++|+|.|+ |.+|..+++.|...|++ |++++|+.... .....+........ ..+++... ...
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~-Vi~~~r~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAKGAR-VALLDRSEDVA-EVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHH-HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 467899999998 99999999999999985 99999987643 33443322111111 11122221 246
Q ss_pred CcEEEEcCCCC
Q 010322 310 ADVVFTSTASE 320 (513)
Q Consensus 310 aDVVI~AT~s~ 320 (513)
.|+||.+.+..
T Consensus 90 ~d~vi~~ag~~ 100 (255)
T PRK06841 90 IDILVNSAGVA 100 (255)
T ss_pred CCEEEECCCCC
Confidence 89999998764
No 483
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.026 Score=54.95 Aligned_cols=75 Identities=21% Similarity=0.329 Sum_probs=51.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceee-----cccchHHhh-------cCC
Q 010322 245 ATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIY-----KPLSEMLSC-------AAD 309 (513)
Q Consensus 245 ~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~-----~~~~~~~~~-------l~~ 309 (513)
.+++++|.|+ |.+|+.+++.|...|. +|++++|++++...+.+.+.. ..+.+ ...+++... ...
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4678999998 9999999999999998 599999998877666554321 01111 111222222 245
Q ss_pred CcEEEEcCCCC
Q 010322 310 ADVVFTSTASE 320 (513)
Q Consensus 310 aDVVI~AT~s~ 320 (513)
.|+||.+.+..
T Consensus 84 id~lv~~ag~~ 94 (241)
T PRK07454 84 PDVLINNAGMA 94 (241)
T ss_pred CCEEEECCCcc
Confidence 89999988753
No 484
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=95.79 E-value=0.025 Score=58.14 Aligned_cols=36 Identities=31% Similarity=0.423 Sum_probs=31.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCCeEEEEeCCHHH
Q 010322 246 TARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEER 282 (513)
Q Consensus 246 g~~VlVIGaG~mG~~ia~~L~~~G~~~V~v~nRs~~r 282 (513)
-++|.|||+|.||..+|..+...|+. |++.+++++.
T Consensus 3 i~kv~ViGaG~MG~gIA~~~A~~G~~-V~l~D~~~~~ 38 (307)
T COG1250 3 IKKVAVIGAGVMGAGIAAVFALAGYD-VVLKDISPEA 38 (307)
T ss_pred ccEEEEEcccchhHHHHHHHhhcCCc-eEEEeCCHHH
Confidence 47899999999999999999996674 9999999654
No 485
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.78 E-value=0.012 Score=52.00 Aligned_cols=92 Identities=22% Similarity=0.290 Sum_probs=55.6
Q ss_pred eEEEEc-ccHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhC----CcceeecccchHHhhcCCCcEEEEcCCCCc
Q 010322 248 RMLVIG-AGKMGKLVIKHLVAK-GCTKMVVVNRSEERVAAICEELN----GVEIIYKPLSEMLSCAADADVVFTSTASEA 321 (513)
Q Consensus 248 ~VlVIG-aG~mG~~ia~~L~~~-G~~~V~v~nRs~~ra~~la~~~g----~~~~~~~~~~~~~~~l~~aDVVI~AT~s~~ 321 (513)
+|.|+| +|.+|+.+++.|..+ .++-+.++.++......+...++ ..+..+.. ...+.+.++|+||.||+...
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dvvf~a~~~~~ 78 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEELSDVDVVFLALPHGA 78 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHHHTTESEEEE-SCHHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhHhhcCCEEEecCchhH
Confidence 689999 699999999999986 34556677777633334555443 11112221 12233589999999998863
Q ss_pred cCCChhhhhcCCchhhhcCCcEEEEeccC
Q 010322 322 PLFLKDHVQDLPPVEAAVGGLRLFIDISV 350 (513)
Q Consensus 322 ~vi~~~~l~~~~~~~~~~~g~~viiDlav 350 (513)
. .+....+. ..| ..+||++-
T Consensus 79 ~---~~~~~~~~-----~~g-~~ViD~s~ 98 (121)
T PF01118_consen 79 S---KELAPKLL-----KAG-IKVIDLSG 98 (121)
T ss_dssp H---HHHHHHHH-----HTT-SEEEESSS
T ss_pred H---HHHHHHHh-----hCC-cEEEeCCH
Confidence 3 22222221 123 58999973
No 486
>PRK05993 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.018 Score=57.75 Aligned_cols=74 Identities=22% Similarity=0.323 Sum_probs=50.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCccee--ecccchHHhhc--------CCCcEE
Q 010322 245 ATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEII--YKPLSEMLSCA--------ADADVV 313 (513)
Q Consensus 245 ~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~--~~~~~~~~~~l--------~~aDVV 313 (513)
.+++|+|.|+ |.+|+.+++.|...|+ +|++++|+.++...+... +...+. +...+++...+ ...|+|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~-~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAE-GLEAFQLDYAEPESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHC-CceEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Confidence 3678999999 9999999999999998 499999998887666542 211111 11112222211 357999
Q ss_pred EEcCCCC
Q 010322 314 FTSTASE 320 (513)
Q Consensus 314 I~AT~s~ 320 (513)
|++.+..
T Consensus 81 i~~Ag~~ 87 (277)
T PRK05993 81 FNNGAYG 87 (277)
T ss_pred EECCCcC
Confidence 9987654
No 487
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.76 E-value=0.026 Score=55.04 Aligned_cols=74 Identities=12% Similarity=0.226 Sum_probs=51.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceeec-----ccchHHhh-------cCC
Q 010322 245 ATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIYK-----PLSEMLSC-------AAD 309 (513)
Q Consensus 245 ~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~~-----~~~~~~~~-------l~~ 309 (513)
.+++++|.|+ |.+|+.+++.|...|+. |++++|+.++...+...+.. ..+.+. ..+++.+. ...
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAK-VAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 99999999999999984 99999998877665544311 011111 11122222 246
Q ss_pred CcEEEEcCCC
Q 010322 310 ADVVFTSTAS 319 (513)
Q Consensus 310 aDVVI~AT~s 319 (513)
.|+||.+.+.
T Consensus 81 ~d~vi~~ag~ 90 (250)
T TIGR03206 81 VDVLVNNAGW 90 (250)
T ss_pred CCEEEECCCC
Confidence 8999999875
No 488
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.029 Score=55.21 Aligned_cols=78 Identities=18% Similarity=0.330 Sum_probs=53.6
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC--Ccceeec--cc---chHHhh-------c
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN--GVEIIYK--PL---SEMLSC-------A 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g--~~~~~~~--~~---~~~~~~-------l 307 (513)
.+.+++++|+|+ |.+|..+++.|...|++.|++++|+.++...+...+. +..+.+. +. +++.+. .
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 467899999998 9999999999999999769999999876655544331 1111111 11 222222 2
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|+||.+.+..
T Consensus 83 g~id~li~~ag~~ 95 (260)
T PRK06198 83 GRLDALVNAAGLT 95 (260)
T ss_pred CCCCEEEECCCcC
Confidence 4689999998764
No 489
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=95.74 E-value=0.017 Score=57.91 Aligned_cols=67 Identities=25% Similarity=0.337 Sum_probs=48.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhhcCCCcEEEEcCCC
Q 010322 247 ARMLVIGA-GKMGKLVIKHLVAK-GCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTAS 319 (513)
Q Consensus 247 ~~VlVIGa-G~mG~~ia~~L~~~-G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~l~~aDVVI~AT~s 319 (513)
.+|+|+|+ |.||+.+++.+... +++-+.++++++++.... ..+ .+..++++.+.+.++|+||++|+.
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-~~~-----~i~~~~dl~~ll~~~DvVid~t~p 70 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-GAL-----GVAITDDLEAVLADADVLIDFTTP 70 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-CCC-----CccccCCHHHhccCCCEEEECCCH
Confidence 47999998 99999999988864 566566788887665433 222 122346676767789999999843
No 490
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.03 Score=55.91 Aligned_cols=75 Identities=13% Similarity=0.217 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc-c-ee--ecccchHHh-------hcCCCcE
Q 010322 245 ATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV-E-II--YKPLSEMLS-------CAADADV 312 (513)
Q Consensus 245 ~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~-~-~~--~~~~~~~~~-------~l~~aDV 312 (513)
.+++|+|.|+ |.+|+.+++.|...|.. |++.+|+.++...+.+.++.. . +. +...+++.+ .+...|+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDR-VVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3678999998 99999999999999974 999999988877766654321 0 11 111122222 1346899
Q ss_pred EEEcCCCC
Q 010322 313 VFTSTASE 320 (513)
Q Consensus 313 VI~AT~s~ 320 (513)
||.+.+..
T Consensus 81 vi~~ag~~ 88 (275)
T PRK08263 81 VVNNAGYG 88 (275)
T ss_pred EEECCCCc
Confidence 99998765
No 491
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.02 Score=56.31 Aligned_cols=73 Identities=16% Similarity=0.333 Sum_probs=50.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceeec-----ccchHHhh-------cCCC
Q 010322 246 TARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIYK-----PLSEMLSC-------AADA 310 (513)
Q Consensus 246 g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~~-----~~~~~~~~-------l~~a 310 (513)
|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.+.+.+.+.. ..+.+. ..+++.+. ....
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 578999999 8999999999999999 599999998877666654421 111111 11122221 2467
Q ss_pred cEEEEcCCC
Q 010322 311 DVVFTSTAS 319 (513)
Q Consensus 311 DVVI~AT~s 319 (513)
|+||++.+.
T Consensus 80 d~lI~~ag~ 88 (252)
T PRK07677 80 DALINNAAG 88 (252)
T ss_pred cEEEECCCC
Confidence 999998864
No 492
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.034 Score=55.16 Aligned_cols=76 Identities=21% Similarity=0.212 Sum_probs=50.1
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcce--eecccchHHhhcCCCcEEEEcCCC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEI--IYKPLSEMLSCAADADVVFTSTAS 319 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~--~~~~~~~~~~~l~~aDVVI~AT~s 319 (513)
.+.+++++|.|+ |++|+.+++.|...|++ |++++|+...............+ .+...+++.+.+...|++|++.|.
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAK-VIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCE-EEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 457899999998 99999999999999984 88888876221111111111001 111223444556789999999875
No 493
>PRK08324 short chain dehydrogenase; Validated
Probab=95.69 E-value=0.03 Score=63.86 Aligned_cols=77 Identities=27% Similarity=0.370 Sum_probs=55.4
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCc-cee-----ecccchHHhh-------cC
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGV-EII-----YKPLSEMLSC-------AA 308 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~-~~~-----~~~~~~~~~~-------l~ 308 (513)
.+.|++|+|+|+ |++|+.+++.|...|+ +|++++|+.++...++..++.. .+. +...+++.+. ..
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g 497 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFG 497 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 457899999996 9999999999999998 5999999998887777665420 111 1111222222 24
Q ss_pred CCcEEEEcCCCC
Q 010322 309 DADVVFTSTASE 320 (513)
Q Consensus 309 ~aDVVI~AT~s~ 320 (513)
+.|+||.+.+..
T Consensus 498 ~iDvvI~~AG~~ 509 (681)
T PRK08324 498 GVDIVVSNAGIA 509 (681)
T ss_pred CCCEEEECCCCC
Confidence 789999998853
No 494
>PRK08643 acetoin reductase; Validated
Probab=95.68 E-value=0.054 Score=53.20 Aligned_cols=74 Identities=26% Similarity=0.375 Sum_probs=51.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCC--cceeec--cc---chHHh-------hcCCC
Q 010322 246 TARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG--VEIIYK--PL---SEMLS-------CAADA 310 (513)
Q Consensus 246 g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~--~~~~~~--~~---~~~~~-------~l~~a 310 (513)
+++++|+|+ |.+|..+++.|...|+ +|++++|+.++...+..++.. ..+.+. +. +++.+ .....
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999998 9999999999999998 599999998877666665421 111111 11 12222 23468
Q ss_pred cEEEEcCCCC
Q 010322 311 DVVFTSTASE 320 (513)
Q Consensus 311 DVVI~AT~s~ 320 (513)
|+||.+.+..
T Consensus 81 d~vi~~ag~~ 90 (256)
T PRK08643 81 NVVVNNAGVA 90 (256)
T ss_pred CEEEECCCCC
Confidence 9999998653
No 495
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.67 E-value=0.057 Score=54.17 Aligned_cols=78 Identities=17% Similarity=0.193 Sum_probs=51.0
Q ss_pred CCCCCCeEEEEccc---HHHHHHHHHHHHcCCCeEEEEeCCHHH---HHHHHHHhCCcc-ee--ecccchHH-------h
Q 010322 242 SSHATARMLVIGAG---KMGKLVIKHLVAKGCTKMVVVNRSEER---VAAICEELNGVE-II--YKPLSEML-------S 305 (513)
Q Consensus 242 ~~l~g~~VlVIGaG---~mG~~ia~~L~~~G~~~V~v~nRs~~r---a~~la~~~g~~~-~~--~~~~~~~~-------~ 305 (513)
+.+.++.++|.|++ +||+.+++.|...|++ |++++|+... .+++.++++... +. +...++.. +
T Consensus 3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~-V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (271)
T PRK06505 3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAE-LAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEK 81 (271)
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCE-EEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 34678999999996 8999999999999985 8888887532 334444444210 11 11111222 1
Q ss_pred hcCCCcEEEEcCCCC
Q 010322 306 CAADADVVFTSTASE 320 (513)
Q Consensus 306 ~l~~aDVVI~AT~s~ 320 (513)
.....|++|++.+..
T Consensus 82 ~~g~iD~lVnnAG~~ 96 (271)
T PRK06505 82 KWGKLDFVVHAIGFS 96 (271)
T ss_pred HhCCCCEEEECCccC
Confidence 235789999998754
No 496
>PRK13301 putative L-aspartate dehydrogenase; Provisional
Probab=95.67 E-value=0.029 Score=56.29 Aligned_cols=67 Identities=19% Similarity=0.308 Sum_probs=48.7
Q ss_pred CeEEEEcccHHHHHHHHHHHHcC---CCeEEEEeCCHHHHHHHHHHhCCcceeecccchHHhh-cCCCcEEEEcCCCC
Q 010322 247 ARMLVIGAGKMGKLVIKHLVAKG---CTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSC-AADADVVFTSTASE 320 (513)
Q Consensus 247 ~~VlVIGaG~mG~~ia~~L~~~G---~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~~~~~~-l~~aDVVI~AT~s~ 320 (513)
.+|.|||+|.||+.++..+...+ ++-+.|++|++++.+.++... ....++.+. ....|+||+|.+..
T Consensus 3 ~rvgiIG~GaIG~~va~~l~~~~~~~~~l~~V~~~~~~~~~~~~~~~-------~~~~~l~~ll~~~~DlVVE~A~~~ 73 (267)
T PRK13301 3 HRIAFIGLGAIASDVAAGLLADAAQPCQLAALTRNAADLPPALAGRV-------ALLDGLPGLLAWRPDLVVEAAGQQ 73 (267)
T ss_pred eEEEEECccHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHhhccC-------cccCCHHHHhhcCCCEEEECCCHH
Confidence 58999999999999999987642 444567778877777765531 133455554 46799999997764
No 497
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=95.67 E-value=0.054 Score=54.60 Aligned_cols=155 Identities=14% Similarity=0.141 Sum_probs=85.8
Q ss_pred HhcCCceeeeeeeeccCCCCcccCcchhhchHHHHHHHhHhcCcccchhhHHHHHHHhhCcccccccccc-CCCchHHHH
Q 010322 152 LLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIA-AGAVSVSSA 230 (513)
Q Consensus 152 ~~~G~eav~hlf~V~sGldS~vvGE~qIlgQvk~A~~~a~~~~~~g~~L~~lf~~ai~v~k~Vr~et~i~-~~~~Sva~~ 230 (513)
...|||+++.+..++++++..-+|+........ ...+....++..-....+.++..+....... ..+...++.
T Consensus 58 ~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~ 131 (325)
T cd08271 58 HVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASL------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQ 131 (325)
T ss_pred cccccceEEEEEEeCCCCCcCCCCCEEEeccCC------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHH
Confidence 457999999999999998888889877642100 0001111111111112223333222221111 122333444
Q ss_pred HHHHHHhhCCCCCCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhCCcceeecccc-----hHH
Q 010322 231 AVELALMKLPESSHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLS-----EML 304 (513)
Q Consensus 231 Av~la~~~~~~~~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g~~~~~~~~~~-----~~~ 304 (513)
++... . ....|.+|+|.|+ |.+|.+++..+...|+. |+++. +.++. .++..+|. ...+.... .+.
T Consensus 132 ~~~~~---~--~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~-v~~~~-~~~~~-~~~~~~g~-~~~~~~~~~~~~~~~~ 202 (325)
T cd08271 132 ALFKK---L--RIEAGRTILITGGAGGVGSFAVQLAKRAGLR-VITTC-SKRNF-EYVKSLGA-DHVIDYNDEDVCERIK 202 (325)
T ss_pred HHHHh---c--CCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEE-cHHHH-HHHHHcCC-cEEecCCCccHHHHHH
Confidence 43221 1 2347899999999 78999999999999986 66665 55555 45566663 21221111 122
Q ss_pred hhc--CCCcEEEEcCCCCc
Q 010322 305 SCA--ADADVVFTSTASEA 321 (513)
Q Consensus 305 ~~l--~~aDVVI~AT~s~~ 321 (513)
... .++|+++++++++.
T Consensus 203 ~~~~~~~~d~vi~~~~~~~ 221 (325)
T cd08271 203 EITGGRGVDAVLDTVGGET 221 (325)
T ss_pred HHcCCCCCcEEEECCCcHh
Confidence 222 36999999998753
No 498
>COG4091 Predicted homoserine dehydrogenase [Amino acid transport and metabolism]
Probab=95.67 E-value=0.024 Score=58.50 Aligned_cols=78 Identities=18% Similarity=0.265 Sum_probs=51.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhCCcceee------------------cccchHHh
Q 010322 245 ATARMLVIGAGKMGKLVIKHLVA-KGCTKMVVVNRSEERVAAICEELNGVEIIY------------------KPLSEMLS 305 (513)
Q Consensus 245 ~g~~VlVIGaG~mG~~ia~~L~~-~G~~~V~v~nRs~~ra~~la~~~g~~~~~~------------------~~~~~~~~ 305 (513)
..-+|.+||+|.||+.++..... .|.+-+.+.+|+.+.+..-.++-+.....+ ...+|...
T Consensus 16 ~PiRVGlIGAG~mG~~ivtQi~~m~Gm~vvaisd~~~~~ak~A~~~ag~~~~~~~e~~~~s~~a~Ai~aGKi~vT~D~~~ 95 (438)
T COG4091 16 KPIRVGLIGAGEMGTGIVTQIASMPGMEVVAISDRNLDAAKRAYDRAGGPKIEAVEADDASKMADAIEAGKIAVTDDAEL 95 (438)
T ss_pred CceEEEEecccccchHHHHHHhhcCCceEEEEecccchHHHHHHHHhcCCcccccccchhhHHHHHHhcCcEEEecchhh
Confidence 44689999999999999887776 488878889999887755444333211111 11122222
Q ss_pred h--cCCCcEEEEcCCCCcc
Q 010322 306 C--AADADVVFTSTASEAP 322 (513)
Q Consensus 306 ~--l~~aDVVI~AT~s~~~ 322 (513)
. ....|+||+|||.|..
T Consensus 96 i~~~~~IdvIIdATG~p~v 114 (438)
T COG4091 96 IIANDLIDVIIDATGVPEV 114 (438)
T ss_pred hhcCCcceEEEEcCCCcch
Confidence 2 2367999999999864
No 499
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.67 E-value=0.033 Score=54.98 Aligned_cols=75 Identities=11% Similarity=0.178 Sum_probs=49.8
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh---CCcceeec--cc---chHHhh-------
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL---NGVEIIYK--PL---SEMLSC------- 306 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~---g~~~~~~~--~~---~~~~~~------- 306 (513)
.+.+++|+|.|+ |.+|..+++.|...|++ |+++.|+ .+.+++.+.+ +. .+.+. +. +++...
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~ 88 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAGAD-IIITTHG-TNWDETRRLIEKEGR-KVTFVQVDLTKPESAEKVVKEALEE 88 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCC-cHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899999999 99999999999999985 8888887 4443444332 21 11111 11 122222
Q ss_pred cCCCcEEEEcCCCC
Q 010322 307 AADADVVFTSTASE 320 (513)
Q Consensus 307 l~~aDVVI~AT~s~ 320 (513)
....|++|.+.+..
T Consensus 89 ~g~id~li~~ag~~ 102 (258)
T PRK06935 89 FGKIDILVNNAGTI 102 (258)
T ss_pred cCCCCEEEECCCCC
Confidence 23679999988753
No 500
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.029 Score=55.17 Aligned_cols=76 Identities=17% Similarity=0.239 Sum_probs=51.4
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhC--Ccceeec--cc---chHHhh-------c
Q 010322 243 SHATARMLVIGA-GKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN--GVEIIYK--PL---SEMLSC-------A 307 (513)
Q Consensus 243 ~l~g~~VlVIGa-G~mG~~ia~~L~~~G~~~V~v~nRs~~ra~~la~~~g--~~~~~~~--~~---~~~~~~-------l 307 (513)
++.+++++|+|+ |.+|+.+++.|...|++ |+++.|+..+. ++.+.+. +..+.+. +. +++... .
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~~-v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGAI-PVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCCc-EEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 578999999998 89999999999999985 88888887765 4443331 1111111 11 222222 2
Q ss_pred CCCcEEEEcCCCC
Q 010322 308 ADADVVFTSTASE 320 (513)
Q Consensus 308 ~~aDVVI~AT~s~ 320 (513)
...|+||.+.+..
T Consensus 82 ~~id~vi~~ag~~ 94 (258)
T PRK08628 82 GRIDGLVNNAGVN 94 (258)
T ss_pred CCCCEEEECCccc
Confidence 4689999998753
Done!