Your job contains 1 sequence.
>010324
MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL
PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL
LVRTYFDAHEAYQDSTKERRRAQIAQAIAAEVSVVPPSRLMALIGQALKWQQHQGLLPPG
TQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVV
WDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLR
RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND
GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS
SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM
KVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010324
(513 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2027749 - symbol:SMU1 "AT1G73720" species:3702... 2323 5.1e-241 1
UNIPROTKB|Q5ZME8 - symbol:SMU1 "WD40 repeat-containing pr... 1784 6.6e-184 1
UNIPROTKB|Q2TBS9 - symbol:SMU1 "WD40 repeat-containing pr... 1784 6.6e-184 1
UNIPROTKB|Q2TAY7 - symbol:SMU1 "WD40 repeat-containing pr... 1784 6.6e-184 1
MGI|MGI:1915546 - symbol:Smu1 "smu-1 suppressor of mec-8 ... 1784 6.6e-184 1
RGD|620694 - symbol:Smu1 "smu-1 suppressor of mec-8 and u... 1774 7.6e-183 1
ZFIN|ZDB-GENE-040426-916 - symbol:smu1 "smu-1 suppressor ... 1762 1.4e-181 1
FB|FBgn0038666 - symbol:Smu1 "SMU1 ortholog" species:7227... 1701 4.1e-175 1
WB|WBGene00004895 - symbol:smu-1 species:6239 "Caenorhabd... 1411 2.2e-144 1
DICTYBASE|DDB_G0278353 - symbol:smu1 "suppressor of mec-8... 1244 1.1e-126 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 365 1.5e-33 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 357 1.1e-32 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 357 1.1e-32 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 357 1.1e-32 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 357 1.1e-32 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 357 1.1e-32 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 357 1.1e-32 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 351 4.7e-32 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 336 2.5e-30 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 336 2.5e-30 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 338 1.3e-27 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 296 9.4e-26 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 273 3.4e-23 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 275 6.1e-23 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 275 6.1e-23 1
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 288 1.3e-22 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 270 1.5e-22 1
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 278 2.2e-21 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 244 6.7e-21 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 272 9.1e-21 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 279 1.1e-20 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 236 1.6e-20 2
ZFIN|ZDB-GENE-050417-160 - symbol:wdr38 "WD repeat domain... 240 1.4e-19 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 254 3.0e-19 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 251 1.5e-18 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 251 1.5e-18 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 246 2.6e-18 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 249 2.7e-18 1
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 242 7.5e-18 2
MGI|MGI:1917493 - symbol:Wdr61 "WD repeat domain 61" spec... 224 8.0e-18 1
UNIPROTKB|Q6GMD2 - symbol:wdr61 "WD repeat-containing pro... 224 8.0e-18 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 245 1.0e-17 1
UNIPROTKB|F1RKU4 - symbol:WDR61 "Uncharacterized protein"... 223 1.0e-17 1
UNIPROTKB|H0YN81 - symbol:WDR61 "WD repeat-containing pro... 223 1.0e-17 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 231 1.4e-17 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 240 1.5e-17 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 239 1.7e-17 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 241 1.8e-17 1
UNIPROTKB|F1NFT8 - symbol:WDR61 "WD repeat-containing pro... 223 2.0e-17 1
UNIPROTKB|Q5ZJH5 - symbol:WDR61 "WD repeat-containing pro... 223 2.0e-17 1
UNIPROTKB|Q32LN7 - symbol:WDR61 "WD repeat-containing pro... 223 2.0e-17 1
UNIPROTKB|Q9GZS3 - symbol:WDR61 "WD repeat-containing pro... 223 2.0e-17 1
UNIPROTKB|E2RBV0 - symbol:WDR61 "Uncharacterized protein"... 223 2.0e-17 1
UNIPROTKB|Q229Z6 - symbol:TTHERM_01308010 "POC1 centriola... 242 2.6e-17 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 222 2.6e-17 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 236 3.5e-17 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 240 4.7e-17 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 240 4.7e-17 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 240 4.7e-17 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 240 4.8e-17 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 240 4.8e-17 1
UNIPROTKB|P63247 - symbol:GNB2L1 "Guanine nucleotide-bind... 226 4.8e-17 1
UNIPROTKB|P63243 - symbol:GNB2L1 "Guanine nucleotide-bind... 226 4.8e-17 1
UNIPROTKB|F1PLR0 - symbol:GNB2L1 "Uncharacterized protein... 226 4.8e-17 1
UNIPROTKB|P63244 - symbol:GNB2L1 "Guanine nucleotide-bind... 226 4.8e-17 1
UNIPROTKB|P63246 - symbol:GNB2L1 "Guanine nucleotide-bind... 226 4.8e-17 1
UNIPROTKB|B1N1C2 - symbol:GNB2L1 "Uncharacterized protein... 226 4.8e-17 1
UNIPROTKB|Q4R7Y4 - symbol:GNB2L1 "Guanine nucleotide-bind... 226 4.8e-17 1
UNIPROTKB|Q5U275 - symbol:gnb2l1 "LOC495666 protein" spec... 226 4.8e-17 1
MGI|MGI:101849 - symbol:Gnb2l1 "guanine nucleotide bindin... 226 4.8e-17 1
RGD|69229 - symbol:Gnb2l1 "guanine nucleotide binding pro... 226 4.8e-17 1
UNIPROTKB|Q6PBD6 - symbol:wdr61 "WD repeat-containing pro... 222 5.3e-17 1
UNIPROTKB|G8JL27 - symbol:GNB2L1 "Guanine nucleotide-bind... 226 6.3e-17 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 235 6.7e-17 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 229 7.7e-17 1
ZFIN|ZDB-GENE-990415-89 - symbol:gnb2l1 "guanine nucleoti... 224 1.0e-16 1
UNIPROTKB|I3LI24 - symbol:GNB2L1 "Guanine nucleotide-bind... 224 1.0e-16 1
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 220 1.3e-16 1
RGD|1308228 - symbol:Wdr61 "WD repeat domain 61" species:... 220 1.3e-16 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 233 1.4e-16 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 230 1.6e-16 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 231 1.7e-16 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 234 1.7e-16 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 223 1.7e-16 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 232 1.7e-16 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 230 1.8e-16 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 235 1.9e-16 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 229 2.3e-16 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 229 2.3e-16 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 229 2.3e-16 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 229 2.3e-16 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 229 2.3e-16 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 229 2.3e-16 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 229 2.3e-16 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 229 2.3e-16 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 228 2.8e-16 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 228 2.9e-16 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 230 2.9e-16 1
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 226 3.5e-16 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 226 5.0e-16 1
WARNING: Descriptions of 1180 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 2323 (822.8 bits), Expect = 5.1e-241, P = 5.1e-241
Identities = 434/513 (84%), Positives = 470/513 (91%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M LEIEARDVIKI+LQFCKENSL QTFQTLQ+ECQVSLNTVDS+ETF++DINSGRWD++L
Sbjct: 1 MALEIEARDVIKIMLQFCKENSLNQTFQTLQSECQVSLNTVDSVETFISDINSGRWDSVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
PQV+QLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQ MGVMKQEQ ERYLR+EHL
Sbjct: 61 PQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQAERYLRMEHL 120
Query: 121 LVRTYFDAHEAYQDSTKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPPG 180
LVR+YFD HEAY DSTKE EV+VVPPSRLMALIGQALKWQQHQGLLPPG
Sbjct: 121 LVRSYFDPHEAYGDSTKERKRAQIAQAVAAEVTVVPPSRLMALIGQALKWQQHQGLLPPG 180
Query: 181 TQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVV 240
TQFDLFRGTAAMKQDVED +P L+HTIKFG KSHAECARFSPDGQFL S S DGFIEV
Sbjct: 181 TQFDLFRGTAAMKQDVEDTHPNVLTHTIKFGKKSHAECARFSPDGQFLASSSVDGFIEV- 239
Query: 241 WDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLR 300
WDY+SGKLKKDLQYQADE+FMMHD+ VLCI+FSRDSEMLASGSQDGKIK+WRIR+G C+R
Sbjct: 240 WDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIR 299
Query: 301 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 360
R + AHS+GVTSL FSRDGSQ+LSTSFD TARIHGLKSGKLLKEFRGH+SYVN AIFT+D
Sbjct: 300 RFD-AHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSD 358
Query: 361 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 420
GSR++TASSDCTVKVWD K+TDCLQTFKPPPPLRG DASVNS+HLFPKN +HIVVCNKTS
Sbjct: 359 GSRIITASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKTS 418
Query: 421 SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM 480
SIYIMTLQGQVVKSFSSG REGGDFVAACVS KG+WIYC+GED+ LYCF++QSG LEH M
Sbjct: 419 SIYIMTLQGQVVKSFSSGNREGGDFVAACVSTKGDWIYCIGEDKKLYCFNYQSGGLEHFM 478
Query: 481 KVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 513
VHEKDVIG+THHPHRNLLATY EDCTMKLWKP
Sbjct: 479 MVHEKDVIGITHHPHRNLLATYSEDCTMKLWKP 511
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 1784 (633.1 bits), Expect = 6.6e-184, P = 6.6e-184
Identities = 336/514 (65%), Positives = 407/514 (79%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M++EIE+ DVI++++Q+ KENSL + TLQ E VSLNTVDSIE+FVADINSG WD +L
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
+ LKLP L DLYEQ+VLE+IELREL AR++LRQT M ++KQ QPERY+ LE+L
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 121 LVRTYFDAHEAYQD-STKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPP 179
L R+YFD EAY D S+KE EVSVVPPSRLMAL+GQALKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP 180
Query: 180 GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEV 239
G DLFRG AA+K E+ +PT LS IKFG KSH ECARFSPDGQ+LV+ S DGFIEV
Sbjct: 181 GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV 240
Query: 240 VWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCL 299
W++ +GK++KDL+YQA + FMM D+ VLC+ FSRD+EMLA+G+QDGKIKVW+I+SGQCL
Sbjct: 241 -WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCL 299
Query: 300 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 359
RR ERAHS+GVT L FS+D SQILS SFD T RIHGLKSGK LKEFRGHSS+VN+A FT
Sbjct: 300 RRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQ 359
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 419
DG +++ASSD TVKVW++K+T+C TFK G D +VNSV L PKNP+H VVCN++
Sbjct: 360 DGHYIISASSDGTVKVWNVKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRS 419
Query: 420 SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 479
+++ IM +QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE
Sbjct: 420 NTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERT 479
Query: 480 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 513
+ VHEKDVIG+ HHPH+NL+ATY ED +KLWKP
Sbjct: 480 LTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 1784 (633.1 bits), Expect = 6.6e-184, P = 6.6e-184
Identities = 335/514 (65%), Positives = 407/514 (79%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M++EIE+ DVI++++Q+ KENSL + TLQ E VSLNTVDSIE+FVADINSG WD +L
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
+ LKLP L DLYEQ+VLE+IELREL AR++LRQT M ++KQ QPERY+ LE+L
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 121 LVRTYFDAHEAYQD-STKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPP 179
L R+YFD EAY D S+KE EVSVVPPSRLMAL+GQALKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP 180
Query: 180 GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEV 239
G DLFRG AA+K E+ +PT LS IKFG KSH ECARFSPDGQ+LV+ S DGFIEV
Sbjct: 181 GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV 240
Query: 240 VWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCL 299
W++ +GK++KDL+YQA + FMM D+ VLC+ FSRD+EMLA+G+QDGKIKVW+I+SGQCL
Sbjct: 241 -WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCL 299
Query: 300 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 359
RR ERAHS+GVT L FS+D SQILS SFD T RIHGLKSGK LKEFRGHSS+VN+A FT
Sbjct: 300 RRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQ 359
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 419
DG +++ASSD TVK+W++K+T+C TFK G D +VNSV L PKNP+H VVCN++
Sbjct: 360 DGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRS 419
Query: 420 SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 479
+++ IM +QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE
Sbjct: 420 NTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERT 479
Query: 480 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 513
+ VHEKDVIG+ HHPH+NL+ATY ED +KLWKP
Sbjct: 480 LTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 1784 (633.1 bits), Expect = 6.6e-184, P = 6.6e-184
Identities = 335/514 (65%), Positives = 407/514 (79%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M++EIE+ DVI++++Q+ KENSL + TLQ E VSLNTVDSIE+FVADINSG WD +L
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
+ LKLP L DLYEQ+VLE+IELREL AR++LRQT M ++KQ QPERY+ LE+L
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 121 LVRTYFDAHEAYQD-STKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPP 179
L R+YFD EAY D S+KE EVSVVPPSRLMAL+GQALKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP 180
Query: 180 GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEV 239
G DLFRG AA+K E+ +PT LS IKFG KSH ECARFSPDGQ+LV+ S DGFIEV
Sbjct: 181 GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV 240
Query: 240 VWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCL 299
W++ +GK++KDL+YQA + FMM D+ VLC+ FSRD+EMLA+G+QDGKIKVW+I+SGQCL
Sbjct: 241 -WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCL 299
Query: 300 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 359
RR ERAHS+GVT L FS+D SQILS SFD T RIHGLKSGK LKEFRGHSS+VN+A FT
Sbjct: 300 RRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQ 359
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 419
DG +++ASSD TVK+W++K+T+C TFK G D +VNSV L PKNP+H VVCN++
Sbjct: 360 DGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRS 419
Query: 420 SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 479
+++ IM +QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE
Sbjct: 420 NTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERT 479
Query: 480 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 513
+ VHEKDVIG+ HHPH+NL+ATY ED +KLWKP
Sbjct: 480 LTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 1784 (633.1 bits), Expect = 6.6e-184, P = 6.6e-184
Identities = 335/514 (65%), Positives = 407/514 (79%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M++EIE+ DVI++++Q+ KENSL + TLQ E VSLNTVDSIE+FVADINSG WD +L
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
+ LKLP L DLYEQ+VLE+IELREL AR++LRQT M ++KQ QPERY+ LE+L
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 121 LVRTYFDAHEAYQD-STKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPP 179
L R+YFD EAY D S+KE EVSVVPPSRLMAL+GQALKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP 180
Query: 180 GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEV 239
G DLFRG AA+K E+ +PT LS IKFG KSH ECARFSPDGQ+LV+ S DGFIEV
Sbjct: 181 GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV 240
Query: 240 VWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCL 299
W++ +GK++KDL+YQA + FMM D+ VLC+ FSRD+EMLA+G+QDGKIKVW+I+SGQCL
Sbjct: 241 -WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCL 299
Query: 300 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 359
RR ERAHS+GVT L FS+D SQILS SFD T RIHGLKSGK LKEFRGHSS+VN+A FT
Sbjct: 300 RRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQ 359
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 419
DG +++ASSD TVK+W++K+T+C TFK G D +VNSV L PKNP+H VVCN++
Sbjct: 360 DGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRS 419
Query: 420 SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 479
+++ IM +QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE
Sbjct: 420 NTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERT 479
Query: 480 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 513
+ VHEKDVIG+ HHPH+NL+ATY ED +KLWKP
Sbjct: 480 LTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 1774 (629.5 bits), Expect = 7.6e-183, P = 7.6e-183
Identities = 333/514 (64%), Positives = 405/514 (78%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M++EIE+ DVI++++Q+ KENSL + T E VSLNTVDSIE+FVADINSG WD +L
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATFTEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
+ LKLP L DLYEQ+VLE+IELREL AR++LRQT M ++KQ QPERY+ LE+L
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 121 LVRTYFDAHEAYQD-STKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPP 179
L R+YFD EAY D S+KE EVSVVPPSRLMAL+GQALKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP 180
Query: 180 GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEV 239
G DLFRG AA+K E+ +PT LS IKFG KSH ECARFSPDGQ+LV+ S DGFIEV
Sbjct: 181 GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV 240
Query: 240 VWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCL 299
W++ +GK++KDL+YQA + FMM D+ VLC+ FSRD+EMLA+G+QDGKIKVW+I+SGQCL
Sbjct: 241 -WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCL 299
Query: 300 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 359
RR ERAHS+GVT L FS+D SQILS SFD T RIHGLKSGK LKEFRGHSS+VN+A FT
Sbjct: 300 RRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQ 359
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 419
DG +++ASSD TVK+W++K+T+C TFK G D +VNSV L PKNP+H VVCN++
Sbjct: 360 DGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRS 419
Query: 420 SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 479
+++ IM +QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE
Sbjct: 420 NTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERT 479
Query: 480 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 513
+ VHEKDVIG+ HHPH+NL+ATY ED +KLWKP
Sbjct: 480 LTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 1762 (625.3 bits), Expect = 1.4e-181, P = 1.4e-181
Identities = 330/514 (64%), Positives = 404/514 (78%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M++EIE+ DVI++++Q+ KENSL +T LQ E VSLNTVDSIE+FVADINSG WD +L
Sbjct: 1 MSIEIESADVIRLIMQYLKENSLHRTLAMLQEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
+ LKLP L DLYEQ+VLE+IELREL AR++LRQT M ++KQ QPERY+ LE+L
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 121 LVRTYFDAHEAYQD-STKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPP 179
L R+YFD EAY D S+KE EVSVVPPSRLMAL+GQ+LKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP 180
Query: 180 GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEV 239
G DLFRG AA+K E+ +PT L+ IKFG KSH ECARFSPDGQ+LV+ S DGFIEV
Sbjct: 181 GMTIDLFRGKAAVKDVEEERFPTQLARHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV 240
Query: 240 VWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCL 299
W++ +GK++KDL+YQA + FMM D+ VLC+ FSRD+EMLA+G+QDGKIKVW+I+SGQCL
Sbjct: 241 -WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMLATGAQDGKIKVWKIQSGQCL 299
Query: 300 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 359
RR ERAHS+GVT L FS+D +QILS SFD T RIHGLKSGK LKEFRGHSS+VN+A T
Sbjct: 300 RRYERAHSKGVTCLSFSKDSTQILSASFDQTIRIHGLKSGKCLKEFRGHSSFVNEATLTP 359
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 419
DG ++ASSD TVKVW++K+T+C TFK G D +VN+V L PKNP+H VVCN++
Sbjct: 360 DGHHAISASSDGTVKVWNMKTTECTSTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRS 419
Query: 420 SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 479
+++ IM +QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE
Sbjct: 420 NTVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDYVLYCFSTVTGKLERT 479
Query: 480 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 513
+ VHEKDVIG+ HHPH+NL+ TY ED +KLWKP
Sbjct: 480 LTVHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP 513
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 1701 (603.8 bits), Expect = 4.1e-175, P = 4.1e-175
Identities = 315/514 (61%), Positives = 407/514 (79%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M++EIE+ DVI+++ Q+ KE++L +T QTLQ E VSLNTVDS++ FV DI++G WD +L
Sbjct: 1 MSIEIESADVIRLIQQYLKESNLMKTLQTLQEETGVSLNTVDSVDGFVQDISNGHWDTVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
LKLP KL +LYEQIVLE+IELREL AR++LRQT M ++KQ++PERY+ LE++
Sbjct: 61 KVTQSLKLPDKKLLNLYEQIVLELIELRELGAARSLLRQTDPMTMLKQQEPERYIHLENM 120
Query: 121 LVRTYFDAHEAYQD-STKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPP 179
L R YFD EAY + S+KE EV VVP SRL+AL+GQALKWQQHQGLLPP
Sbjct: 121 LQRAYFDPREAYAEGSSKEKRRTVIAQELSGEVHVVPSSRLLALLGQALKWQQHQGLLPP 180
Query: 180 GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEV 239
GT DLFRG AAMK E+MYPT L IKFG KSH ECA+FSPDGQ+L++ S DGF+EV
Sbjct: 181 GTTIDLFRGKAAMKDQEEEMYPTQLFRQIKFGQKSHVECAQFSPDGQYLITGSVDGFLEV 240
Query: 240 VWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCL 299
W++ +GK++KDL+YQA + FMM ++ VL + FSRDSEM+ASG+QDG+IKVWRI +GQCL
Sbjct: 241 -WNFTTGKVRKDLKYQAQDQFMMMEQAVLALNFSRDSEMVASGAQDGQIKVWRIITGQCL 299
Query: 300 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 359
R+ E+AH++G+T L FSRD SQ+LS SFD T R+HGLKSGK+LKEF+GHSS+VN+A FT
Sbjct: 300 RKFEKAHTKGITCLQFSRDNSQVLSASFDYTVRLHGLKSGKMLKEFKGHSSFVNEATFTP 359
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 419
DG V++ASSD TVKVW LK+T+C+ T+KP G + +VN+V + PKNP+H +VCN++
Sbjct: 360 DGHSVLSASSDGTVKVWSLKTTECVATYKP----LGNELAVNTVLILPKNPEHFIVCNRS 415
Query: 420 SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 479
+++ IM +QGQ+V+SFSSGKREGG F++A +SP+GE+IYC GED+ LYCFS SGKLE
Sbjct: 416 NTVVIMNMQGQIVRSFSSGKREGGAFISATLSPRGEFIYCAGEDQVLYCFSVSSGKLERT 475
Query: 480 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 513
+ VHEKDVIG+THHPH+NLLA+Y ED +KLWKP
Sbjct: 476 LNVHEKDVIGLTHHPHQNLLASYSEDGLLKLWKP 509
>WB|WBGene00004895 [details] [associations]
symbol:smu-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IGI] [GO:0048666 "neuron development" evidence=IGI]
[GO:0002119 "nematode larval development" evidence=IGI] [GO:0040011
"locomotion" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0009792 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0048644 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0048666 HSSP:P16649 GO:GO:0007638 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:Z81490 EMBL:AF330595 PIR:T20276
RefSeq:NP_493279.1 UniGene:Cel.19360 ProteinModelPortal:G5EEG7
SMR:G5EEG7 IntAct:G5EEG7 EnsemblMetazoa:CC4.3 GeneID:173175
KEGG:cel:CELE_CC4.3 CTD:173175 WormBase:CC4.3 NextBio:878585
Uniprot:G5EEG7
Length = 510
Score = 1411 (501.8 bits), Expect = 2.2e-144, P = 2.2e-144
Identities = 265/511 (51%), Positives = 362/511 (70%)
Query: 2 TLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAILP 61
++EIE+ DVI+++ QF KE++L +T LQ E VSLNTVDSI+ F +I SG WD +L
Sbjct: 3 SIEIESSDVIRLIEQFLKESNLHRTLAILQEETNVSLNTVDSIDGFCNEITSGNWDNVLK 62
Query: 62 QVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHLL 121
V LKLP KL DLYE +++E++ELREL TAR + RQT M ++KQ P+R+ RLE L+
Sbjct: 63 TVQSLKLPAKKLIDLYEHVIIELVELRELATARLVARQTDPMILLKQIDPDRFARLESLI 122
Query: 122 VRTYFDAHEAYQDSTKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPPGT 181
R YFD E Y D +KE EV VV PSRL++L+GQ+LKWQ HQGLLPPGT
Sbjct: 123 NRPYFDGQEVYGDVSKEKRRSVIAQTLSSEVHVVAPSRLLSLLGQSLKWQLHQGLLPPGT 182
Query: 182 QFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVW 241
DLFRG AA K+ +E+ YPT ++ +IKF TKS+ E A FSPD +LVS S DGFIEV W
Sbjct: 183 AIDLFRGKAAQKEQIEERYPTMMARSIKFSTKSYPESAVFSPDANYLVSGSKDGFIEV-W 241
Query: 242 DYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRR 301
+Y++GKL+KDL+YQA + MM D V CI FSRDSEMLA+GS DGKIKVW++ +G CLRR
Sbjct: 242 NYMNGKLRKDLKYQAQDNLMMMDAAVRCISFSRDSEMLATGSIDGKIKVWKVETGDCLRR 301
Query: 302 LERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDG 361
+RAH++GV ++ FS+D S ILS D R+HG+KSGK LKE RGHSSY+ D ++++G
Sbjct: 302 FDRAHTKGVCAVRFSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEG 361
Query: 362 SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN-PDHIVVCNKTS 420
+ +++ S+D +++VW KS +CL TF+ + D + +V PK+ P ++VCN+++
Sbjct: 362 NHIISCSTDGSIRVWHGKSGECLSTFR----VGSEDYPILNVIPIPKSDPPQMIVCNRSN 417
Query: 421 SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM 480
++Y++ + GQVV++ +SGKRE GDF+ +SPKGEW Y + ED +YCF SG LE +
Sbjct: 418 TLYVVNISGQVVRTMTSGKREKGDFINCILSPKGEWAYAIAEDGVMYCFMVLSGTLETTL 477
Query: 481 KVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
V E+ IG+ HHPH+NL+A+Y ED +KLW
Sbjct: 478 PVTERLPIGLAHHPHQNLIASYAEDGLLKLW 508
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 1244 (443.0 bits), Expect = 1.1e-126, P = 1.1e-126
Identities = 243/515 (47%), Positives = 345/515 (66%)
Query: 3 LEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAILPQ 62
+EI+++DVIK++LQF KENSL + LQ E ++LN VDS ETF+ D+ +G WD++L
Sbjct: 12 IEIQSQDVIKLILQFLKENSLGNSLTALQEETGINLNAVDSKETFLNDVKNGNWDSVLTV 71
Query: 63 VAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHLLV 122
V+ L+L L DLYEQIV E++ L+E + + ++R+T+ + MK Q ERYL+LE+ L
Sbjct: 72 VSTLRLSTTLLMDLYEQIV-ELLHLKEYELCKYLIRKTEPLNYMKLNQQERYLKLENHLQ 130
Query: 123 RTYFDAHEAYQDS-TKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPPGT 181
R Y D + Y+ T E E+ VP SRL++L+ Q+L WQ+HQG++P
Sbjct: 131 REYIDLGDFYKYGITTEKRRKQLIEQLNNEIITVPSSRLLSLLSQSLHWQKHQGIIPDDC 190
Query: 182 -QFDLFRGTAAMK--QDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIE 238
+FDLF+G K + E+ T L TIKF K+ E +FSPD ++L++ S DGFIE
Sbjct: 191 MEFDLFKGEVPFKKIESEEEQITTVLDKTIKFNNKNKPETIKFSPDSKYLLTGSMDGFIE 250
Query: 239 VVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQC 298
V WDY +GKL K L YQ+++ FMMHD+ +LCI FS+D E LA+GS D KIKVW+I+SG+C
Sbjct: 251 V-WDYNTGKLSKSLAYQSNDDFMMHDDAILCIAFSKDGEFLATGSLDNKIKVWQIKSGKC 309
Query: 299 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
LR+ E AH+ GVT L FSR+ +QILS SFDS+ +IHGLKSGK LK FRGH S+VND F
Sbjct: 310 LRKFEPAHTNGVTCLQFSRNSTQILSGSFDSSLKIHGLKSGKALKIFRGHQSFVNDCCFN 369
Query: 359 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 418
+D RV++ SSD +K+WD KS+DCLQT P + D S+ S+ + KNP+ ++VCN
Sbjct: 370 HDEDRVISCSSDGKIKIWDAKSSDCLQTITPTSVVTVRDISIRSITILLKNPEFLLVCN- 428
Query: 419 TSSIYIMTLQGQVV-KSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 477
+S I I++++ Q + K+F+S + F+ +SP ++Y V ED LY F SG L
Sbjct: 429 SSQISIVSMKSQTISKTFTSENSK--TFLVCTLSPLQNYLYAVDEDNILYTFDFNSGSLL 486
Query: 478 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ K+H+++VI ++HHP +NLLAT G DC +K+WK
Sbjct: 487 NKFKIHDQEVISISHHPTKNLLATTGSDCLLKIWK 521
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 99/340 (29%), Positives = 165/340 (48%)
Query: 179 PGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECA---RFSPDGQFLVSCSFDG 235
P T+ + T + + P ++T+KF H + +FSP+G++L S S D
Sbjct: 8 PETEASKTQSTPSSSNNQSKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK 67
Query: 236 FIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRS 295
I++ W GK +K T H + + +S DS +L S S D +K+W + S
Sbjct: 68 LIKI-WGAYDGKFEK--------TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118
Query: 296 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 355
G+CL+ L + HS V F+ + I+S SFD + RI +K+GK LK HS V+
Sbjct: 119 GKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Query: 356 IFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV 415
F DGS +V++S D ++WD S CL+T + + V+ V P N +I+
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-----IDDDNPPVSFVKFSP-NGKYILA 231
Query: 416 CNKTSSIYIMTL-QGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSG 474
+++ + +G+ +K+++ K E A G+WI ED +Y ++ Q+
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 291
Query: 475 KLEHLMKVHEKDVIGVTHHPHRNLLATYG--EDCTMKLWK 512
++ ++ H VI HP N++A+ D T+KLWK
Sbjct: 292 EVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 95/318 (29%), Positives = 157/318 (49%)
Query: 201 PTTLSHTIKFGTKSHAECA---RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
P ++ +KF H + +FSP+G++L S S D I++ W GK +K
Sbjct: 4 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKI-WGAYDGKFEK------- 55
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
T H + + +S DS +L S S D +K+W + SG+CL+ L + HS V F+
Sbjct: 56 -TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNP 113
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ I+S SFD + RI +K+GK LK HS V+ F DGS +V++S D ++WD
Sbjct: 114 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 173
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFS 436
S CL+T + + V+ V P N +I+ +++ + +G+ +K+++
Sbjct: 174 TASGQCLKTL-----IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYT 227
Query: 437 SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 496
K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP
Sbjct: 228 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 287
Query: 497 NLLATYG--EDCTMKLWK 512
N++A+ D T+KLWK
Sbjct: 288 NIIASAALENDKTIKLWK 305
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 95/318 (29%), Positives = 157/318 (49%)
Query: 201 PTTLSHTIKFGTKSHAECA---RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
P ++ +KF H + +FSP+G++L S S D I++ W GK +K
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKI-WGAYDGKFEK------- 81
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
T H + + +S DS +L S S D +K+W + SG+CL+ L + HS V F+
Sbjct: 82 -TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNP 139
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ I+S SFD + RI +K+GK LK HS V+ F DGS +V++S D ++WD
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFS 436
S CL+T + + V+ V P N +I+ +++ + +G+ +K+++
Sbjct: 200 TASGQCLKTL-----IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 437 SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 496
K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
Query: 497 NLLATYG--EDCTMKLWK 512
N++A+ D T+KLWK
Sbjct: 314 NIIASAALENDKTIKLWK 331
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 95/318 (29%), Positives = 157/318 (49%)
Query: 201 PTTLSHTIKFGTKSHAECA---RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
P ++ +KF H + +FSP+G++L S S D I++ W GK +K
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKI-WGAYDGKFEK------- 81
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
T H + + +S DS +L S S D +K+W + SG+CL+ L + HS V F+
Sbjct: 82 -TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNP 139
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ I+S SFD + RI +K+GK LK HS V+ F DGS +V++S D ++WD
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFS 436
S CL+T + + V+ V P N +I+ +++ + +G+ +K+++
Sbjct: 200 TASGQCLKTL-----IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 437 SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 496
K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
Query: 497 NLLATYG--EDCTMKLWK 512
N++A+ D T+KLWK
Sbjct: 314 NIIASAALENDKTIKLWK 331
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 95/318 (29%), Positives = 157/318 (49%)
Query: 201 PTTLSHTIKFGTKSHAECA---RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
P ++ +KF H + +FSP+G++L S S D I++ W GK +K
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKI-WGAYDGKFEK------- 81
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
T H + + +S DS +L S S D +K+W + SG+CL+ L + HS V F+
Sbjct: 82 -TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNP 139
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ I+S SFD + RI +K+GK LK HS V+ F DGS +V++S D ++WD
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFS 436
S CL+T + + V+ V P N +I+ +++ + +G+ +K+++
Sbjct: 200 TASGQCLKTL-----IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 437 SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 496
K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
Query: 497 NLLATYG--EDCTMKLWK 512
N++A+ D T+KLWK
Sbjct: 314 NIIASAALENDKTIKLWK 331
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 95/318 (29%), Positives = 157/318 (49%)
Query: 201 PTTLSHTIKFGTKSHAECA---RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
P ++ +KF H + +FSP+G++L S S D I++ W GK +K
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKI-WGAYDGKFEK------- 81
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
T H + + +S DS +L S S D +K+W + SG+CL+ L + HS V F+
Sbjct: 82 -TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNP 139
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ I+S SFD + RI +K+GK LK HS V+ F DGS +V++S D ++WD
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFS 436
S CL+T + + V+ V P N +I+ +++ + +G+ +K+++
Sbjct: 200 TASGQCLKTL-----IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 437 SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 496
K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
Query: 497 NLLATYG--EDCTMKLWK 512
N++A+ D T+KLWK
Sbjct: 314 NIIASAALENDKTIKLWK 331
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 95/318 (29%), Positives = 157/318 (49%)
Query: 201 PTTLSHTIKFGTKSHAECA---RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
P ++ +KF H + +FSP+G++L S S D I++ W GK +K
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKI-WGAYDGKFEK------- 81
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
T H + + +S DS +L S S D +K+W + SG+CL+ L + HS V F+
Sbjct: 82 -TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNP 139
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ I+S SFD + RI +K+GK LK HS V+ F DGS +V++S D ++WD
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFS 436
S CL+T + + V+ V P N +I+ +++ + +G+ +K+++
Sbjct: 200 TASGQCLKTL-----IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 437 SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 496
K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
Query: 497 NLLATYG--EDCTMKLWK 512
N++A+ D T+KLWK
Sbjct: 314 NIIASAALENDKTIKLWK 331
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 94/314 (29%), Positives = 157/314 (50%)
Query: 205 SHTIKFGTKSHAECA---RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFM 261
++T+KF H + +FSP+G++L S S D I++ W GK +K T
Sbjct: 61 NYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKI-WGAYDGKFEK--------TIS 111
Query: 262 MHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 321
H + + +S DS +L SGS D +KVW + +G+ L+ L + HS V F+ +
Sbjct: 112 GHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTL-KGHSNYVFCCNFNPQSNL 170
Query: 322 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 381
I+S SFD + RI +++GK LK HS V+ F DGS +V++S D ++WD S
Sbjct: 171 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 230
Query: 382 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKR 440
CL+T + + V+ V P N +I+ +++ + +G+ +K+++ K
Sbjct: 231 QCLKTL-----IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 284
Query: 441 EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLA 500
E A G+WI ED +Y ++ QS ++ ++ H V+ HP N++A
Sbjct: 285 EKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIA 344
Query: 501 TYG--EDCTMKLWK 512
+ D T+KLWK
Sbjct: 345 SAALENDKTIKLWK 358
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 336 (123.3 bits), Expect = 2.5e-30, P = 2.5e-30
Identities = 92/326 (28%), Positives = 157/326 (48%)
Query: 194 QDVEDMYPTTLSHTIKFGTKSHAEC---ARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKK 250
Q E + P T ++ +K+ K H + +FSPDG++L S S D I++ W GK ++
Sbjct: 25 QQTESI-PQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKI-WGAYDGKFER 82
Query: 251 DLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGV 310
L+ H E + I +S+DS+++ S S D IK+W + SG+ ++ L + H E V
Sbjct: 83 TLEG--------HKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTL-KGHKEYV 133
Query: 311 TSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSD 370
+ F+ + I+S SFD RI + +G+ K HS V F DG+ VV+ S D
Sbjct: 134 FGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYD 193
Query: 371 CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV--CNKTSSIYIMTLQ 428
TV++WD + L T D S F N ++ + T ++
Sbjct: 194 GTVRIWDTTTGQLLNTISTE------DGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNN 247
Query: 429 GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 488
+ +K+++ K E + G+WI ED +Y ++ Q+ ++ + HE V+
Sbjct: 248 KKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVL 307
Query: 489 GVTHHPHRNLLATYG--EDCTMKLWK 512
V HP N++A+ +D ++K+WK
Sbjct: 308 TVACHPTENIIASGALEKDRSVKIWK 333
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 336 (123.3 bits), Expect = 2.5e-30, P = 2.5e-30
Identities = 91/325 (28%), Positives = 158/325 (48%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLK 249
+A +++ E P G + +FSP+G++L S + D I ++W G K
Sbjct: 16 SAPRREEEPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALI-IIWGAYDGNCK 74
Query: 250 KDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG 309
K L Y H + + +S DS L S S D +KVW +RSG+CL+ L + HS+
Sbjct: 75 KTL-YG-------HSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTL-KGHSDF 125
Query: 310 VTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS 369
V F+ + I+S SFD + +I +K+GK LK HS ++ F +GS +V+ S
Sbjct: 126 VFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSY 185
Query: 370 DCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-Q 428
D ++WD S CL+T G+ V+ V P N +I+ +++ + +
Sbjct: 186 DGLCRIWDAASGQCLRTLADE-----GNPPVSFVKFSP-NGKYILTATLDNTLKLWDYSR 239
Query: 429 GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 488
G+ +K+++ K E A+ +W+ ED +Y ++ Q+ ++ ++ H VI
Sbjct: 240 GRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVI 299
Query: 489 GVTHHPHRNLLATYG--EDCTMKLW 511
HP +N++A+ D T+K+W
Sbjct: 300 SAACHPTKNIIASAALENDKTIKVW 324
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 338 (124.0 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 91/294 (30%), Positives = 148/294 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
F+PDG+ L S S D I++ WD +G+L++ L H ++V + FS D ++LA
Sbjct: 842 FAPDGKELASASDDSTIKI-WDLATGELQQTLD--------SHSQSVRSVAFSPDGKLLA 892
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
S S D IKVW +G+ + LE S V S+ FS DG ++ S S +T ++ +G+
Sbjct: 893 SSSLDSTIKVWNPATGELQQSLE-GRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGE 951
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 400
LL+ GHS V F+ DG ++ ++SSD T+K+W+ + + QTFK G D +
Sbjct: 952 LLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFK------GHDLWI 1005
Query: 401 NSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYC 459
+V P H+V + ++I + L ++ +S R A SP + +
Sbjct: 1006 RAVAFSPDGK-HLVSGSDDNTIKLWDLATSELQQSLEDHSRS---VHAVAFSPDDKQLAS 1061
Query: 460 VGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 513
D + + +G+L+ ++ H + V VT P LLA+ D T+KLW P
Sbjct: 1062 SSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNP 1115
Score = 333 (122.3 bits), Expect = 5.1e-27, P = 5.1e-27
Identities = 91/303 (30%), Positives = 148/303 (48%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G E FSPDG+ L S S+D I++ WD +G+L LQ TF H ++ +
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDL-WDSATGEL---LQ-----TFEGHPHSIWSV 840
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
F+ D + LAS S D IK+W + +G+ + L+ +HS+ V S+ FS DG + S+S DST
Sbjct: 841 AFAPDGKELASASDDSTIKIWDLATGELQQTLD-SHSQSVRSVAFSPDGKLLASSSLDST 899
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
++ +G+L + G S +V F+ DG ++ + S TVK+W+ + + LQT
Sbjct: 900 IKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQT---- 955
Query: 391 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFV--AA 448
L G SV SV P + T+ + G++ ++F +G D A
Sbjct: 956 --LEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTF-----KGHDLWIRAV 1008
Query: 449 CVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTM 508
SP G+ + +D + + + +L+ ++ H + V V P LA+ D T+
Sbjct: 1009 AFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTI 1068
Query: 509 KLW 511
KLW
Sbjct: 1069 KLW 1071
Score = 323 (118.8 bits), Expect = 7.6e-26, P = 7.6e-26
Identities = 92/304 (30%), Positives = 158/304 (51%)
Query: 214 SHAECAR---FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
SH++ R FSPDG+ L S S D I+V W+ +G+L++ L+ ++ V +
Sbjct: 874 SHSQSVRSVAFSPDGKLLASSSLDSTIKV-WNPATGELQQSLEGRSG--------WVKSV 924
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
FS D + LASGS+ +K+W +G+ L+ LE HS+ V S+ FS DG Q+ S+S D+T
Sbjct: 925 AFSPDGKKLASGSEKNTVKLWNPATGELLQTLE-GHSQSVRSVAFSPDGKQLASSSSDTT 983
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
++ +G+L + F+GH ++ F+ DG +V+ S D T+K+WDL +++ Q+ +
Sbjct: 984 IKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLE-- 1041
Query: 391 PPLRGGDASVNSVHLFPKNPDHIVVCNKT--SSIYIM-TLQGQVVKSFSSGKREGGDFVA 447
D S SVH +PD + + + S+I + + G++ ++ G +G V
Sbjct: 1042 ------DHS-RSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLE-GHSQGVRSVT 1093
Query: 448 ACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCT 507
SP G+ + D + ++ +G+L+ + V V P LA+ D T
Sbjct: 1094 --FSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDST 1151
Query: 508 MKLW 511
+KLW
Sbjct: 1152 IKLW 1155
Score = 303 (111.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 89/295 (30%), Positives = 141/295 (47%)
Query: 217 ECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDS 276
E FSPDG+ LVS S+D +++ WD +G+L LQ T H TV + FS D
Sbjct: 754 ESVVFSPDGKQLVSGSYDDTVKI-WDPATGEL---LQ-----TLDGHSGTVESLAFSPDG 804
Query: 277 EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL 336
++LASGS D I +W +G+ L+ E H + S+ F+ DG ++ S S DST +I L
Sbjct: 805 KLLASGSYDNTIDLWDSATGELLQTFE-GHPHSIWSVAFAPDGKELASASDDSTIKIWDL 863
Query: 337 KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGG 396
+G+L + HS V F+ DG + ++S D T+KVW+ + + Q+ L G
Sbjct: 864 ATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQS------LEGR 917
Query: 397 DASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEW 456
V SV P K + G+++++ G + VA SP G+
Sbjct: 918 SGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLE-GHSQSVRSVA--FSPDGKQ 974
Query: 457 IYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ D + ++ +G+L+ K H+ + V P L + +D T+KLW
Sbjct: 975 LASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLW 1029
Score = 294 (108.6 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 71/195 (36%), Positives = 109/195 (55%)
Query: 204 LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMH 263
L T++ G FSPDG+ L S S+DG I++ W+ L+G+L++ L ++D
Sbjct: 1078 LQRTLE-GHSQGVRSVTFSPDGKLLASNSYDGTIKL-WNPLTGELQQTLTGRSD------ 1129
Query: 264 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
V + FS D + LASG D IK+W +G+ L+ LE HS+ + S+VFS DG +
Sbjct: 1130 --WVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLE-GHSDRIQSVVFSPDGKLLA 1186
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
S S+D TA++ +G+LL+ F GHS +V F+ DG + ++S T+K+WD + +
Sbjct: 1187 SGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGEL 1246
Query: 384 LQTFKPPPPLRGGDA 398
LQT P G A
Sbjct: 1247 LQTLNDPDESAGSVA 1261
Score = 283 (104.7 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 99/358 (27%), Positives = 168/358 (46%)
Query: 168 LKWQQHQGLLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTK---SHAECARFSPD 224
L W + +L G ++ R ++ ++D + LS + + ++ A +P
Sbjct: 645 LHWMEVMSIL--GVMPEVIRAICRLQSGIQDDKDSELSKFLYDARRFVLNNRHLAETAPL 702
Query: 225 GQFLVSCSF--DGFI-EVVWDY-LSG--KLKKDLQ-YQADE-TFMMHDETVLCIEFSRDS 276
+ F +G I +++Y LSG +L K Q + A++ T H V + FS D
Sbjct: 703 QLYSSGLMFSPEGSITRRIFNYNLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDG 762
Query: 277 EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL 336
+ L SGS D +K+W +G+ L+ L+ HS V SL FS DG + S S+D+T +
Sbjct: 763 KQLVSGSYDDTVKIWDPATGELLQTLD-GHSGTVESLAFSPDGKLLASGSYDNTIDLWDS 821
Query: 337 KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGG 396
+G+LL+ F GH + F DG + +AS D T+K+WDL + + QT L
Sbjct: 822 ATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQT------LDSH 875
Query: 397 DASVNSVHLFPKNPDHIVVCNKT--SSIYIMT-LQGQVVKSFSSGKREGGDFVAACVSPK 453
SV SV +PD ++ + + S+I + G++ +S G+ G + SP
Sbjct: 876 SQSVRSVAF---SPDGKLLASSSLDSTIKVWNPATGELQQSLE-GR--SGWVKSVAFSPD 929
Query: 454 GEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
G+ + E + ++ +G+L ++ H + V V P LA+ D T+KLW
Sbjct: 930 GKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLW 987
Score = 262 (97.3 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 82/272 (30%), Positives = 131/272 (48%)
Query: 247 KLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAH 306
KL + +TF HD + + FS D + L SGS D IK+W + + + + LE H
Sbjct: 985 KLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLED-H 1043
Query: 307 SEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 366
S V ++ FS D Q+ S+S DST ++ +G+L + GHS V F+ DG + +
Sbjct: 1044 SRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLAS 1103
Query: 367 ASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM- 425
S D T+K+W+ + + QT L G V+SV P + S+I +
Sbjct: 1104 NSYDGTIKLWNPLTGELQQT------LTGRSDWVDSVAFSPDGKQ-LASGYYDSTIKLWD 1156
Query: 426 TLQGQVVKSFSSGKREG-GDFVAACV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH 483
+ G+++++ EG D + + V SP G+ + D+ + +G+L + + H
Sbjct: 1157 SATGELLQTL-----EGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGH 1211
Query: 484 EKDVIGVTHHPHRNLLAT--YGEDCTMKLWKP 513
K V V P LLA+ YGE T+KLW P
Sbjct: 1212 SKWVESVAFSPDGKLLASSSYGE--TIKLWDP 1241
Score = 218 (81.8 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 61/186 (32%), Positives = 94/186 (50%)
Query: 204 LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMH 263
L T+ G + FSPDG+ L S +D I++ WD +G+L LQ T H
Sbjct: 1120 LQQTLT-GRSDWVDSVAFSPDGKQLASGYYDSTIKL-WDSATGEL---LQ-----TLEGH 1169
Query: 264 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
+ + + FS D ++LASGS D K+W +G+ L+ E HS+ V S+ FS DG +
Sbjct: 1170 SDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFE-GHSKWVESVAFSPDGKLLA 1228
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDC-TVKVWDLKSTD 382
S+S+ T ++ +G+LL+ F+ DG+R+ AS D K+WD + +
Sbjct: 1229 SSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRL--ASVDIFDTKIWDPATGE 1286
Query: 383 CLQTFK 388
LQ K
Sbjct: 1287 LLQALK 1292
Score = 205 (77.2 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 61/209 (29%), Positives = 100/209 (47%)
Query: 306 HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV 365
H V S+VFS DG Q++S S+D T +I +G+LL+ GHS V F+ DG +
Sbjct: 749 HLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLA 808
Query: 366 TASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM 425
+ S D T+ +WD + + LQTF+ P S+ SV P + + + S+I I
Sbjct: 809 SGSYDNTIDLWDSATGELLQTFEGHPH------SIWSVAFAPDGKE-LASASDDSTIKIW 861
Query: 426 TLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHE 484
L G++ ++ S + + SP G+ + D + ++ +G+L+ ++
Sbjct: 862 DLATGELQQTLDSHSQS---VRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRS 918
Query: 485 KDVIGVTHHPHRNLLATYGEDCTMKLWKP 513
V V P LA+ E T+KLW P
Sbjct: 919 GWVKSVAFSPDGKKLASGSEKNTVKLWNP 947
Score = 167 (63.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 59/190 (31%), Positives = 89/190 (46%)
Query: 163 LIGQALKWQQHQGLLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFS 222
L G++ W P G Q L G + D L T++ G + FS
Sbjct: 1124 LTGRS-DWVDSVAFSPDGKQ--LASGYYDSTIKLWDSATGELLQTLE-GHSDRIQSVVFS 1179
Query: 223 PDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 282
PDG+ L S S+D ++ WD +G+L LQ F H + V + FS D ++LAS
Sbjct: 1180 PDGKLLASGSYDQTAKL-WDPATGEL---LQI-----FEGHSKWVESVAFSPDGKLLASS 1230
Query: 283 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 342
S IK+W +G+ L+ L E S+ FS DG+++ S T +I +G+LL
Sbjct: 1231 SYGETIKLWDPVTGELLQTLNDP-DESAGSVAFSPDGNRLASVDIFDT-KIWDPATGELL 1288
Query: 343 KEFRGHSSYV 352
+ +GHS +V
Sbjct: 1289 QALKGHSKWV 1298
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 296 (109.3 bits), Expect = 9.4e-26, P = 9.4e-26
Identities = 91/329 (27%), Positives = 154/329 (46%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G A +V P T++ G + C +FS DG L S S D + ++W +
Sbjct: 19 GNAGTSGNVPIYKPYRHLKTLE-GHTAAISCVKFSNDGNLLASASVDKTM-ILWSATNYS 76
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG-QCLRRLERAH 306
L +Y+ H + + +S DS S S D +++W RS +CL+ L R H
Sbjct: 77 LIH--RYEG------HSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVL-RGH 127
Query: 307 SEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 366
+ V + F+ + I+S SFD T RI +K+GK ++ + HS ++ F DGS +V+
Sbjct: 128 TNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVS 187
Query: 367 ASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT 426
AS D + K+WD K CL+T L + S F N I+V S++ +
Sbjct: 188 ASHDGSCKIWDAKEGTCLKT------LIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSN 241
Query: 427 LQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEK 485
G+ +K ++ + +A G++I ED +Y + Q+ + ++ H
Sbjct: 242 YATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTD 301
Query: 486 DVIGVTHHPHRNLLATYGE--DCTMKLWK 512
VI V+ HP +N +++ G D T+++WK
Sbjct: 302 AVISVSCHPVQNEISSSGNHLDKTIRIWK 330
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 273 (101.2 bits), Expect = 3.4e-23, P = 3.4e-23
Identities = 84/314 (26%), Positives = 141/314 (44%)
Query: 201 PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETF 260
P S T+ ++ +FS DG+ L S S D I Y + + E F
Sbjct: 13 PYVHSQTLTSHNRA-VSSVKFSSDGRLLASASADKTIRT---YTINTINDPIAEPVQE-F 67
Query: 261 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGS 320
H+ + + FS D+ + S S D +K+W + +G ++ L H+ + F+ +
Sbjct: 68 TGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLI-GHTNYAFCVNFNPQSN 126
Query: 321 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
I+S SFD T RI + +GK LK HS V F DGS +V++S D ++WD +
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT 186
Query: 381 TDCLQTF--KPPPPLRGGDASVNSVHLFPKNPDHIV-VCNKTSSIYIMTLQGQVVKSFSS 437
C++T PP+ S N + D+ + + N +S+ ++ T G V +
Sbjct: 187 GHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCI 246
Query: 438 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 497
A V+ G+ I ED ++ + S KL ++ H + V+ V HP N
Sbjct: 247 SS-------AFSVT-NGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTEN 298
Query: 498 LLATYGEDCTMKLW 511
L+A+ D T+++W
Sbjct: 299 LIASGSLDKTVRIW 312
Score = 251 (93.4 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 60/191 (31%), Positives = 98/191 (51%)
Query: 198 DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
D+ +L T+ G ++A C F+P +VS SFD + + WD +GK K L
Sbjct: 99 DVETGSLIKTL-IGHTNYAFCVNFNPQSNMIVSGSFDETVRI-WDVTTGKCLKVLP---- 152
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
H + V ++F+RD ++ S S DG ++W +G C++ L + V+ + FS
Sbjct: 153 ----AHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSP 208
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGH--SSY-VNDAIFTNDGSRVVTASSDCTVK 374
+G IL + D+T R+ + S K LK + GH + Y ++ A +G R+V+ S D V
Sbjct: 209 NGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVH 268
Query: 375 VWDLKSTDCLQ 385
+W+L S LQ
Sbjct: 269 MWELNSKKLLQ 279
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/161 (27%), Positives = 79/161 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
F+ DG +VS S+DG + WD +G K L D+ + V + FS + + +
Sbjct: 163 FNRDGSLIVSSSYDGLCRI-WDSGTGHCVKTL---IDD----ENPPVSFVRFSPNGKFIL 214
Query: 281 SGSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFS-RDGSQILSTSFDSTARIHGLKS 338
G+ D +++W I S + L+ +++ S FS +G +I+S S D+ + L S
Sbjct: 215 VGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNS 274
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
KLL++ GH+ V + + + + S D TV++W K
Sbjct: 275 KKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQK 315
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 275 (101.9 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 66/225 (29%), Positives = 115/225 (51%)
Query: 198 DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
++ + ++ T+K G ++ C F+P +VS SFD + + WD +G K
Sbjct: 157 EIVTSRMTKTLK-GHNNYVFCCNFNPQSSLVVSGSFDESVRI-WDVKTGMCIK------- 207
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
T H + V + F+RD ++ASGS DG +++W +GQC++ L + V + FS
Sbjct: 208 -TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSP 266
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGH--SSYVNDAIFTNDGSR-VVTASSDCTVK 374
+G IL+++ DST ++ GK LK++ GH S Y A F+ G + +++ S DC +
Sbjct: 267 NGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIY 326
Query: 375 VWDLKSTDCLQTFKP-PPPLRGGDAS-----VNSVHLFPKNPDHI 413
+W+L++ + +Q + P+ D + S L P N HI
Sbjct: 327 IWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHI 371
Score = 257 (95.5 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 81/311 (26%), Positives = 148/311 (47%)
Query: 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDET 266
T++ TKS + A+FSP G++L + S D +++ W+ D + T H
Sbjct: 82 TLEGHTKSISS-AKFSPCGKYLGTSSADKTVKI-WNM-------DHMI-CERTLTGHKLG 131
Query: 267 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS 326
V I +S DS + S S D +K++ I + + + L + H+ V F+ S ++S S
Sbjct: 132 VNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTL-KGHNNYVFCCNFNPQSSLVVSGS 190
Query: 327 FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 386
FD + RI +K+G +K HS V+ F DGS + + S D V++WD + C++T
Sbjct: 191 FDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKT 250
Query: 387 FKPP--PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKREGG 443
PP+ A V F N +I+ N S++ + +G+ +K ++ +
Sbjct: 251 LVDDENPPV----AFVK----FSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKY 302
Query: 444 DFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG 503
A G+WI ED +Y ++ Q+ ++ ++ H + V+ HP +N++A+
Sbjct: 303 CIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGA 362
Query: 504 --EDCTMKLWK 512
D + +W+
Sbjct: 363 LEPDNKIHIWR 373
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 275 (101.9 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 66/225 (29%), Positives = 115/225 (51%)
Query: 198 DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
++ + ++ T+K G ++ C F+P +VS SFD + + WD +G K
Sbjct: 157 EIVTSRMTKTLK-GHNNYVFCCNFNPQSSLVVSGSFDESVRI-WDVKTGMCIK------- 207
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
T H + V + F+RD ++ASGS DG +++W +GQC++ L + V + FS
Sbjct: 208 -TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSP 266
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGH--SSYVNDAIFTNDGSR-VVTASSDCTVK 374
+G IL+++ DST ++ GK LK++ GH S Y A F+ G + +++ S DC +
Sbjct: 267 NGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIY 326
Query: 375 VWDLKSTDCLQTFKP-PPPLRGGDAS-----VNSVHLFPKNPDHI 413
+W+L++ + +Q + P+ D + S L P N HI
Sbjct: 327 IWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHI 371
Score = 257 (95.5 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 81/311 (26%), Positives = 148/311 (47%)
Query: 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDET 266
T++ TKS + A+FSP G++L + S D +++ W+ D + T H
Sbjct: 82 TLEGHTKSISS-AKFSPCGKYLGTSSADKTVKI-WNM-------DHMI-CERTLTGHKLG 131
Query: 267 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS 326
V I +S DS + S S D +K++ I + + + L + H+ V F+ S ++S S
Sbjct: 132 VNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTL-KGHNNYVFCCNFNPQSSLVVSGS 190
Query: 327 FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 386
FD + RI +K+G +K HS V+ F DGS + + S D V++WD + C++T
Sbjct: 191 FDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKT 250
Query: 387 FKPP--PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKREGG 443
PP+ A V F N +I+ N S++ + +G+ +K ++ +
Sbjct: 251 LVDDENPPV----AFVK----FSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKY 302
Query: 444 DFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG 503
A G+WI ED +Y ++ Q+ ++ ++ H + V+ HP +N++A+
Sbjct: 303 CIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGA 362
Query: 504 --EDCTMKLWK 512
D + +W+
Sbjct: 363 LEPDNKIHIWR 373
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 288 (106.4 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 96/346 (27%), Positives = 162/346 (46%)
Query: 177 LPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVS-CSFDG 235
LPP + + A +V+ + L H + S C RFS DG++L + C+
Sbjct: 235 LPPSQKKEGVDWYAVFNPEVQRVLDVELVHHLVHD--SVVCCVRFSRDGKYLATGCNRSA 292
Query: 236 FIEVVWDYLSGKLKKDLQYQA-DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR 294
I +D G+ LQ ++ D++ ++ +V C FS D + LA+G++D +I+VW I
Sbjct: 293 QI---FDVTLGQNVAVLQDESVDKSGDLYIRSV-C--FSPDGKYLATGAEDKQIRVWDIA 346
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
+ + ++ + H + + SL F+ +G I S S D T R+ + GKL+ V
Sbjct: 347 T-RTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDG-VTT 404
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV 414
+ DG V S D TV+VWD + ++ + P G SV SV P + +
Sbjct: 405 VAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPD---GHKDSVYSVAFAPNGKELVS 461
Query: 415 -VCNKTSSIYIMTLQGQVVKSFSSGKR-----EGG-DFV-AACVSPKGEWIYCVGEDRNL 466
+KT ++ + L Q S G + EG DFV + C++P G W+ +DR +
Sbjct: 462 GSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGV 521
Query: 467 YCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ +G + +++ H+ VI V P NL AT D ++W+
Sbjct: 522 QFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIWR 567
Score = 160 (61.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 56/262 (21%), Positives = 111/262 (42%)
Query: 261 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL--ERAHSEG---VTSLVF 315
++HD V C+ FSRD + LA+G + +++ + GQ + L E G + S+ F
Sbjct: 266 LVHDSVVCCVRFSRDGKYLATGC-NRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCF 324
Query: 316 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 375
S DG + + + D R+ + + + F GH + F +G + + S D TV++
Sbjct: 325 SPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRL 384
Query: 376 WDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV-VCNKTSSIYIMTLQ---GQV 431
WD+ + T + S + +++ + D V V + T+ + L+ G
Sbjct: 385 WDIAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHK 444
Query: 432 VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVT 491
+S G + + K ++ + R Y + + GK + H+ V+ V
Sbjct: 445 DSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVC 504
Query: 492 HHPHRNLLATYGEDCTMKLWKP 513
P + + + +D ++ W P
Sbjct: 505 LTPDGHWVMSGSKDRGVQFWDP 526
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 270 (100.1 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 59/192 (30%), Positives = 105/192 (54%)
Query: 201 PTT-LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADET 259
PT ++ T+K G ++ C F+P +VS SFD + + WD +G K T
Sbjct: 151 PTVKMAKTLK-GHTNYVFCCNFNPQSSLVVSGSFDESVRI-WDVRTGMCVK--------T 200
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
H + V + F+RD ++ SGS DG +++W +GQC++ L + V + FS +G
Sbjct: 201 LPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNG 260
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSS--YVNDAIFTNDGSR-VVTASSDCTVKVW 376
ILS++ D+T ++ GK LK+++GH + Y A F+ G + +++ S DC + VW
Sbjct: 261 KYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVW 320
Query: 377 DLKSTDCLQTFK 388
+L++ + +Q+ +
Sbjct: 321 NLQTKEVVQSLE 332
Score = 259 (96.2 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 80/313 (25%), Positives = 147/313 (46%)
Query: 204 LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMH 263
L TI+ TKS +FSP G+FL + S D +++ W+ DL + T H
Sbjct: 71 LISTIEGHTKS-ISAVKFSPCGKFLGTSSADKTVKI-WNM------SDLS--CERTLTGH 120
Query: 264 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
V +S DS+ + + S D +K++ + + + + L + H+ V F+ S ++
Sbjct: 121 KLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTL-KGHTNYVFCCNFNPQSSLVV 179
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
S SFD + RI +++G +K HS V+ F DGS + + S D V++WD + C
Sbjct: 180 SGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQC 239
Query: 384 LQTFKPP--PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKRE 441
++T PP+ S N ++ N D+ T ++ +G+ +K + +
Sbjct: 240 VKTLVDDENPPVAFVKFSPNGKYILSSNLDN------TLKLWDFG-KGKTLKQYQGHENN 292
Query: 442 GGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLAT 501
A G+WI ED +Y ++ Q+ ++ ++ H + VI HP +N++A+
Sbjct: 293 KYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIAS 352
Query: 502 YG--EDCTMKLWK 512
D T+++W+
Sbjct: 353 GALEPDNTIRIWR 365
Score = 218 (81.8 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 67/262 (25%), Positives = 115/262 (43%)
Query: 254 YQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSL 313
Y+ T H +++ ++FS + L + S D +K+W + C R L H GV
Sbjct: 69 YKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLT-GHKLGVNDF 127
Query: 314 VFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTV 373
+S D I++ S D T +I+ + + K+ K +GH++YV F S VV+ S D +V
Sbjct: 128 AWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESV 187
Query: 374 KVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM-TLQGQVV 432
++WD+++ C++T P S S F ++ I + + I T GQ V
Sbjct: 188 RIWDVRTGMCVKTL----PAHSDPVSAVS---FNRDGSLITSGSYDGLVRIWDTANGQCV 240
Query: 433 KSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 492
K+ + FV SP G++I D L + GK + HE + +
Sbjct: 241 KTLVDDENPPVAFVK--FSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFA 298
Query: 493 H---PHRNLLATYGEDCTMKLW 511
+ + + EDC + +W
Sbjct: 299 NFSVTGGKWIISGSEDCKIYVW 320
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 278 (102.9 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 97/333 (29%), Positives = 158/333 (47%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVS-CSFDGFIEVVWDYLSGKL 248
A Q V + L HT++ +S C RFS DG+++ + C+ I +D +G+
Sbjct: 278 AIFNQAVPRVLDVDLVHTLQH--ESVVCCVRFSADGKYVATGCNRSAQI---FDVNTGEK 332
Query: 249 KKDLQYQ-ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
LQ AD T ++ +V C FS D + LA+G++D +I+VW I + + +R H
Sbjct: 333 VCVLQDDNADTTGDLYIRSV-C--FSPDGKYLATGAEDKQIRVWDITT-RTIRIQFAGHE 388
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
+ + SL F+RDG I S S D T R+ +++G L F AI + D V
Sbjct: 389 QDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIEDGVTTVAI-SPDTKYVAAG 447
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV-VCNKTSSIY-IM 425
S D +V+VWDL ++ + P G SV SV P D + +KT ++ +
Sbjct: 448 SLDKSVRVWDLTQGCPVERLEGPD---GHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELA 504
Query: 426 TLQGQVVKSFSSGKR-----EGG-DFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 478
T +G + S G R EG DFV + ++P +W+ +DR + + ++G +
Sbjct: 505 TPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQL 564
Query: 479 LMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+++ H+ VI V P AT D ++W
Sbjct: 565 MLQGHKNSVISVAPSPTGGFFATGSGDMRARIW 597
Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 57/271 (21%), Positives = 116/271 (42%)
Query: 261 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQ--CLRRLERAHSEG---VTSLVF 315
+ H+ V C+ FS D + +A+G + +++ + +G+ C+ + + A + G + S+ F
Sbjct: 296 LQHESVVCCVRFSADGKYVATGC-NRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCF 354
Query: 316 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 375
S DG + + + D R+ + + + +F GH + F DG + + S D TV++
Sbjct: 355 SPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRL 414
Query: 376 WDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKS 434
WD+++ L F + G V +V + P + ++ + S+ + L QG V+
Sbjct: 415 WDIENGTALTVFT----IEDG---VTTVAISP-DTKYVAAGSLDKSVRVWDLTQGCPVER 466
Query: 435 FSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFS---------HQSGKLEHLMKVHE- 484
+ SP G + D+ + + +Q K +K E
Sbjct: 467 LEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEG 526
Query: 485 -KD-VIGVTHHPHRNLLATYGEDCTMKLWKP 513
+D V+ V P + + +D ++ W P
Sbjct: 527 HRDFVLSVALTPDNQWVMSGSKDRGVQFWDP 557
Score = 130 (50.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 49/200 (24%), Positives = 85/200 (42%)
Query: 195 DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQY 254
D+E+ T+ TI+ G + A SPD +++ + S D + V WD G + L+
Sbjct: 416 DIENGTALTV-FTIEDGVTTVA----ISPDTKYVAAGSLDKSVRV-WDLTQGCPVERLE- 468
Query: 255 QADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRI------------RSGQCLRRL 302
D H ++V + FS + L +GS D IK+W + + G+C++
Sbjct: 469 GPDG----HKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTF 524
Query: 303 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS 362
E H + V S+ + D ++S S D + ++G +GH + V + G
Sbjct: 525 E-GHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGG 583
Query: 363 RVVTASSDCTVKVWDLKSTD 382
T S D ++W D
Sbjct: 584 FFATGSGDMRARIWSYTRMD 603
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 244 (91.0 bits), Expect = 6.7e-21, Sum P(2) = 6.7e-21
Identities = 57/192 (29%), Positives = 96/192 (50%)
Query: 197 EDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQA 256
ED P I G ++ +F P +VS S D I+V WD+ SG+ ++ L+
Sbjct: 90 EDALPRPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKV-WDFESGEFERTLKG-- 146
Query: 257 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 316
H V I+F + +LAS S D IK+W ++ C++ L H V+ + F+
Sbjct: 147 ------HTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLH-GHDHNVSCVRFT 199
Query: 317 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
G Q++S+S D T ++ +G +K GH +V + DGS + + S+D T+K W
Sbjct: 200 PSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTW 259
Query: 377 DLKSTDCLQTFK 388
++ +CL T++
Sbjct: 260 NIVKGECLATYR 271
Score = 187 (70.9 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 51/163 (31%), Positives = 73/163 (44%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
V D T+K G + + F G L SCS D I++ WD+ + Y
Sbjct: 132 VWDFESGEFERTLK-GHTNAVQDIDFDKTGNLLASCSADLTIKL-WDFQT--------YD 181
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
+T HD V C+ F+ + L S S+D IKVW +G C++ L H + V +
Sbjct: 182 CVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLV-GHEDWVRKITV 240
Query: 316 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
S DGS I S S D T + + G+ L +R HS V F+
Sbjct: 241 SEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFS 283
Score = 135 (52.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 338
LA+GS+D IK+W + +G+CL H V ++ F G +LS D T R+ +
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYI-GHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQ 377
Query: 339 GKLLKEFR-GHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
G+ +K H+ +++ F + T D +KVW L+
Sbjct: 378 GRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 126 (49.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 53/181 (29%), Positives = 81/181 (44%)
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
+T + H++ V I S D +AS S D IK W I G+CL R HS V L FS
Sbjct: 226 KTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATY-REHSHVVECLAFST 284
Query: 318 DGSQILSTSFDSTARIHGLKSGKL-LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
+ I+ D + GK +K+ G + V + GSR D T+K+W
Sbjct: 285 --ANII----DIPGSLLSTPEGKSKVKQGPG-GNLVGQCGYLATGSR------DKTIKIW 331
Query: 377 DLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN-KTSSIYIMTLQGQVVKSF 435
+L + CL T+ G D V +V P + V + KT ++ + QG+ +K+
Sbjct: 332 ELATGRCLATYI------GHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIA-QGRCIKTI 384
Query: 436 S 436
+
Sbjct: 385 N 385
Score = 124 (48.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 43/168 (25%), Positives = 74/168 (44%)
Query: 347 GHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLF 406
GH + +N F S +V+AS D T+KVWD +S + +T L+G +V + F
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERT------LKGHTNAVQDID-F 156
Query: 407 PKNPDHIVVCNKTSSIYIMTLQG-QVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGED 463
K + + C+ +I + Q VK+ G D +CV +P G+ + D
Sbjct: 157 DKTGNLLASCSADLTIKLWDFQTYDCVKTL-----HGHDHNVSCVRFTPSGDQLISSSRD 211
Query: 464 RNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ + + +G + HE V +T + +A+ D T+K W
Sbjct: 212 KTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTW 259
Score = 66 (28.3 bits), Expect = 6.7e-21, Sum P(2) = 6.7e-21
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGK-LEHLMKVHEKDVIGVT---HHPHRNLLATYGEDCT 507
P G+++ VG+D+ + + G+ ++ + + H + + H+PH +AT G D
Sbjct: 356 PCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPH---IATGGVDDV 412
Query: 508 MKLWK 512
+K+WK
Sbjct: 413 IKVWK 417
Score = 38 (18.4 bits), Expect = 5.6e-18, Sum P(2) = 5.6e-18
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 499 LATYGEDCTMKLWK 512
LAT D T+K+W+
Sbjct: 319 LATGSRDKTIKIWE 332
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 272 (100.8 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 74/250 (29%), Positives = 121/250 (48%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H+ VL + +S DS +LAS S D +K+W +G LE HS+ V S++FS D S++
Sbjct: 295 HEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLE-GHSDLVRSVIFSHD-SRL 352
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
L+++ DST +I +G L GH +V IF++D + +AS D TVK+WD T
Sbjct: 353 LASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT-GTG 411
Query: 383 CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREG 442
LQ L G V SV +F + + + S++ I ++ G R
Sbjct: 412 SLQH-----TLEGHRDWVRSV-IFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHR-- 463
Query: 443 GDFVAACV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLAT 501
D+V + + S + +DR + + + G +H ++ H V V+ LLA+
Sbjct: 464 -DWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLAS 522
Query: 502 YGEDCTMKLW 511
D T+++W
Sbjct: 523 ASNDQTVRIW 532
Score = 257 (95.5 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 62/185 (33%), Positives = 94/185 (50%)
Query: 203 TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMM 262
+L HT++ G + FS D Q L S S D +++ WD +G L+ L+
Sbjct: 370 SLQHTLE-GHRDWVRSVIFSHDSQLLASASDDSTVKI-WDTGTGSLQHTLEG-------- 419
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H + V + FS DS++LAS S D +K+W +G LE H + V S++FS D +
Sbjct: 420 HRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLE-GHRDWVRSVIFSHDSRLL 478
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
S S D T RI + G GHSS V F++D + +AS+D TV++WD+++
Sbjct: 479 ASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARS 538
Query: 383 CLQTF 387
TF
Sbjct: 539 LQHTF 543
Score = 233 (87.1 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 58/165 (35%), Positives = 84/165 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
+S D + L S S D +++ WD +G L+ L+ H + V + FS DS +LA
Sbjct: 304 YSHDSRLLASASDDRTVKI-WDTETGSLQHTLEG--------HSDLVRSVIFSHDSRLLA 354
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
S S D +K+W +G LE H + V S++FS D + S S DST +I +G
Sbjct: 355 SAS-DSTVKIWDTGTGSLQHTLE-GHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGS 412
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 385
L GH +V IF++D + +AS D TVK+WD T LQ
Sbjct: 413 LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT-GTGSLQ 456
Score = 193 (73.0 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 61/215 (28%), Positives = 100/215 (46%)
Query: 298 CLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIF 357
CL+ LE H V S+ +S D + S S D T +I ++G L GHS V IF
Sbjct: 288 CLQALE-GHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIF 346
Query: 358 TNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN 417
++D SR++ ++SD TVK+WD T LQ L G V SV +F + + +
Sbjct: 347 SHD-SRLLASASDSTVKIWDT-GTGSLQH-----TLEGHRDWVRSV-IFSHDSQLLASAS 398
Query: 418 KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV-SPKGEWIYCVGEDRNLYCFSHQSGKL 476
S++ I ++ G R D+V + + S + + +D + + +G L
Sbjct: 399 DDSTVKIWDTGTGSLQHTLEGHR---DWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 455
Query: 477 EHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+H ++ H V V LLA+ +D T+++W
Sbjct: 456 QHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIW 490
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 279 (103.3 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 86/313 (27%), Positives = 145/313 (46%)
Query: 203 TLSHTIKFGTKSHAECAR---FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADET 259
T + T++ K H + R FS D + + S S D + + W+ +G L+ T
Sbjct: 334 TATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRI-WETTTGLLR--------HT 384
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F H+++V+ + F+ DS LAS S G +K+W R+G LE H + V S+ FS D
Sbjct: 385 FEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLE-GHDDCVNSVSFSPDS 443
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
+ S S D T +I +G L + GH+ +V +F++D + +AS D TVK+WD
Sbjct: 444 RLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDT- 502
Query: 380 STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVKSFSSG 438
+T LQ L D V SV +F + + + ++ I T G + + G
Sbjct: 503 ATVPLQN-----NLESHDNWVRSV-VFSHDSRLLASASDDMTVKIWDTATGSLENTLE-G 555
Query: 439 KREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNL 498
+ + V+ SP + +D + + +G ++H + I + NL
Sbjct: 556 HDDRVNSVS--FSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNL 613
Query: 499 LATYGEDCTMKLW 511
LA+ +D T+K+W
Sbjct: 614 LASAMDDGTVKIW 626
Score = 251 (93.4 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 67/252 (26%), Positives = 118/252 (46%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F HD V + FS DS +LAS S DG +K+W + LE H+E V S+VFS D
Sbjct: 259 FKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLE-GHNEWVKSVVFSHDS 317
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
+ S S D T +I +G L + +GH+ V +F++D + + S+D TV++W+
Sbjct: 318 RLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETT 377
Query: 380 STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGK 439
+ TF+ + SV +V F + + + ++ I + +++ G
Sbjct: 378 TGLLRHTFEDH------EDSVMAVS-FAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGH 430
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 499
+ + V+ SP + +DR + + +G L+ ++ H V V L+
Sbjct: 431 DDCVNSVS--FSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLI 488
Query: 500 ATYGEDCTMKLW 511
A+ +D T+K+W
Sbjct: 489 ASASDDMTVKIW 500
Score = 228 (85.3 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 57/188 (30%), Positives = 94/188 (50%)
Query: 198 DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
D + L +T++ G + FS D + L S S DG +++ WD +G L++ L+
Sbjct: 291 DTATSFLQNTLE-GHNEWVKSVVFSHDSRLLASASDDGTVKI-WDTATGTLQRMLKG--- 345
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
H+++V + FS DS ++ASGS D +++W +G LR H + V ++ F+
Sbjct: 346 -----HNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTG-LLRHTFEDHEDSVMAVSFAH 399
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
D ++ S S +I ++G L GH VN F+ D + +AS D TVK+W
Sbjct: 400 DSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWH 459
Query: 378 LKSTDCLQ 385
+T LQ
Sbjct: 460 A-ATGSLQ 466
Score = 198 (74.8 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 54/185 (29%), Positives = 85/185 (45%)
Query: 203 TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMM 262
+L T++ G FS D + + S S D +++ WD + L+ +L+
Sbjct: 464 SLQRTLE-GHNDWVRSVVFSHDSRLIASASDDMTVKI-WDTATVPLQNNLE--------S 513
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
HD V + FS DS +LAS S D +K+W +G LE H + V S+ FS D +
Sbjct: 514 HDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLE-GHDDRVNSVSFSPDSRLL 572
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
S S D T +I +G + F G F++ + + +A D TVK+WD++
Sbjct: 573 ASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYS 632
Query: 383 CLQTF 387
TF
Sbjct: 633 LRHTF 637
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 236 (88.1 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 83/343 (24%), Positives = 152/343 (44%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G K+D ++ P G +S F P +VS S D I+V WDY +G
Sbjct: 83 GPVGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKV-WDYEAGD 141
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
++ L+ H ++V I F + ++LAS S D IK+W + +C+R + H
Sbjct: 142 FERTLKG--------HTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMH-GHD 192
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
V+S+ +G I+S S D T ++ + +G +K F GH +V DG+ + +
Sbjct: 193 HNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASC 252
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSI----- 422
S+D TV+VW + + +C LR + V + P++ H + T S
Sbjct: 253 SNDQTVRVWVVATKEC------KAELREHEHVVECISWAPESA-HPTISEATGSENKKSG 305
Query: 423 ----YIMT-LQGQVVKSF--SSGK----REGGD-FVAACV-SPKGEWIYCVGEDRNLYCF 469
++++ + + +K + S+G G D +V + P G ++ +D+ L +
Sbjct: 306 KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIW 365
Query: 470 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+++ + + HE V + H + T D T+K+W+
Sbjct: 366 DYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 60/205 (29%), Positives = 87/205 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLSG 246
+A + M+ + +K T H E R + DG L SCS D + V W +
Sbjct: 209 SASRDKTMKMWEVATGYCVKTFT-GHREWVRMVRPNQDGTLLASCSNDQTVRV-WVVATK 266
Query: 247 KLKKDLQYQAD--ETFMMHDETVL-CIEFSRDSE---------MLASGSQDGKIKVWRIR 294
+ K +L+ E E+ I + SE L SGS+D IK+W I
Sbjct: 267 ECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDIS 326
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
+G CL L H V ++F G ++S + D T RI K+ + +K H +V
Sbjct: 327 TGMCLMTLV-GHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTS 385
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLK 379
F VVT S D TVKVW+ +
Sbjct: 386 LDFHKASPYVVTGSVDQTVKVWECR 410
Score = 71 (30.1 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 16/83 (19%), Positives = 40/83 (48%)
Query: 1 MTLEIEARDVI-KIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAI 59
M L RD + + + + + N ++ + T + E ++ +N D ++ A + +W ++
Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDVN--DELDKKFAGLLEKKWTSV 58
Query: 60 LPQVAQLKLPRNKLEDLYEQIVL 82
+ ++ +KL + E+I L
Sbjct: 59 IRLQKKVMELESKLNEAKEEITL 81
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 240 (89.5 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 57/167 (34%), Positives = 85/167 (50%)
Query: 213 KSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEF 272
K+ C FSPD Q L++C G + +W + KL + H V C F
Sbjct: 22 KAEVNCCAFSPDCQLLLTCCDAGKL-YLWKTSTAKLLASVSG--------HTGPVKCCVF 72
Query: 273 SRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 332
S D + AS S D ++ W S +C L AH V ++ FS DG +LS +D+ A
Sbjct: 73 SSDGRLFASASHDCSVRTWCNSSLKCTHTLT-AHRRSVETVSFSPDGQWLLSGGWDNRAL 131
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
I ++SG LL+E +GH++ V ++F++D V T S D V+VW L+
Sbjct: 132 IWSIQSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKLR 178
Score = 146 (56.5 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 45/155 (29%), Positives = 65/155 (41%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G +C FS DG+ S S D + W + LK T H +V +
Sbjct: 62 GHTGPVKCCVFSSDGRLFASASHDCSVRT-W--CNSSLK------CTHTLTAHRRSVETV 112
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
FS D + L SG D + +W I+SG L L + H+ V S VFS D + + S+D
Sbjct: 113 SFSPDGQWLLSGGWDNRALIWSIQSGALLEEL-KGHNAAVQSSVFSSDSQSVATGSWDRA 171
Query: 331 ARIHGLKSGKL-LKEFRGHSSYVNDAIFTNDGSRV 364
R+ L+ + +GH V F+ G V
Sbjct: 172 VRVWKLRDRQAEAVVLQGHLGNVACLCFSVAGMLV 206
Score = 137 (53.3 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 38/115 (33%), Positives = 59/115 (51%)
Query: 205 SHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHD 264
+HT+ +S E FSPDGQ+L+S +D ++W SG L ++L+ H+
Sbjct: 99 THTLTAHRRS-VETVSFSPDGQWLLSGGWDNRA-LIWSIQSGALLEELKG--------HN 148
Query: 265 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
V FS DS+ +A+GS D ++VW++R Q + + H V L FS G
Sbjct: 149 AAVQSSVFSSDSQSVATGSWDRAVRVWKLRDRQAEAVVLQGHLGNVACLCFSVAG 203
Score = 131 (51.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 35/129 (27%), Positives = 54/129 (41%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F H V C FS D ++L + GK+ +W+ + + L + H+ V VFS DG
Sbjct: 18 FSRHKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVS-GHTGPVKCCVFSSDG 76
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
S S D + R S K H V F+ DG +++ D +W ++
Sbjct: 77 RLFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWSIQ 136
Query: 380 STDCLQTFK 388
S L+ K
Sbjct: 137 SGALLEELK 145
Score = 108 (43.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 299 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG--KLLKEFRGHSSYVNDAI 356
+R R H V FS D Q+L T D+ +++ K+ KLL GH+ V +
Sbjct: 15 IRYFSR-HKAEVNCCAFSPD-CQLLLTCCDA-GKLYLWKTSTAKLLASVSGHTGPVKCCV 71
Query: 357 FTNDGSRVVTASSDCTVKVWDLKSTDCLQT 386
F++DG +AS DC+V+ W S C T
Sbjct: 72 FSSDGRLFASASHDCSVRTWCNSSLKCTHT 101
Score = 74 (31.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 451 SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKL 510
SP G+W+ G D +S QSG L +K H V +AT D +++
Sbjct: 115 SPDGQWLLSGGWDNRALIWSIQSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRV 174
Query: 511 WK 512
WK
Sbjct: 175 WK 176
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 254 (94.5 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 81/310 (26%), Positives = 140/310 (45%)
Query: 203 TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMM 262
TL K G + FSP G+ + S S D + +VW+ +K Q +A F
Sbjct: 9 TLERNFK-GHRDAITSLDFSPSGKQIASGSVDASV-MVWN-----MKP--QSRAYR-FTG 58
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H + V C++FS + +LAS S+D +++W + S + L RAH+ V S+ FS DG +
Sbjct: 59 HKDAVTCVQFSPSAHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQSL 117
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
L+ S D + ++ + K++ R H+++V A F+ DG +V+ S D TVK+WD S
Sbjct: 118 LTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQ 177
Query: 383 CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREG 442
+ TF P GG +S H P + I + +++ + ++ + +
Sbjct: 178 LIHTFCEP----GGYSSYVDFH--PSSTC-IATASSDNTVRVWDIRTHTL--LQHYQVHS 228
Query: 443 GDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATY 502
A P G + D L G+L + + H+ V+ + A+
Sbjct: 229 AAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASA 288
Query: 503 GEDCTMKLWK 512
G D + +W+
Sbjct: 289 GSDQQVMVWR 298
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 251 (93.4 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 121/522 (23%), Positives = 218/522 (41%)
Query: 20 ENSLQQTFQTLQNECQVSLNTVDSIETFVADINSG--RWDAILPQVAQ----LKLPRNKL 73
+ L + ++ E + N S + D +S + A + Q+ Q L+L K+
Sbjct: 9 QQRLTELLDAIKTEFDYASNEASSFKKVQEDYDSKYQQQAAEMQQIRQTVYDLELAHRKI 68
Query: 74 EDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHLLVRTYFDAHEAYQ 133
++ YE+ +L + ELDT RQ + G +Q+Q ++ + + + Q
Sbjct: 69 KEAYEEEILRL--KNELDTRD---RQMKN-GFQQQQQQQQQQQQQQ---------QQQQQ 113
Query: 134 DSTKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQ-FDLFRGTAAM 192
+SV+ S+ + Q H +PP Q D+ +
Sbjct: 114 QIVAPPAAPPAPPTPVTSLSVIDKSQYIVNPTQRAN---HVKEIPPFLQDLDIAKANPEF 170
Query: 193 K-QDVED--MYPTTLSHTIKFG---TKSHAE---CARFSPDGQFLVS-CSFDGFI-EVVW 241
K Q +E +Y S + + H+ C RFS DG+F+ + C+ + V
Sbjct: 171 KKQHLEYYVLYNPAFSKDLDIDMVHSLDHSSVVCCVRFSRDGKFIATGCNKTTQVFNVTT 230
Query: 242 DYLSGKL--KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCL 299
L KL + + + D T D + + FS D ++LA+G++D I++W + + + +
Sbjct: 231 GELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRII 290
Query: 300 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 359
+ L R H + + SL F DG +++S S D + RI L++ + A+ +
Sbjct: 291 KIL-RGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAV-SP 348
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVH--LFPKNPDHIVVCN 417
DG + S D TV+VWD ST + G+ +SV+ F N + I +
Sbjct: 349 DGKLIAAGSLDRTVRVWD--STTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGS 406
Query: 418 KTSSIYIMTLQGQVVKSFSSGKREGG--DFV-AACVSPKGEWIYCVGEDRNLYCFSHQSG 474
++ + L+G+ K + G DFV + C +P E+I +DR + + SG
Sbjct: 407 LDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASG 466
Query: 475 KLEHLMKVHEKDVIGVTHHPH----RNLLATYGEDCTMKLWK 512
+++ H VI V + + AT DC ++WK
Sbjct: 467 NPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWK 508
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 251 (93.4 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 121/522 (23%), Positives = 218/522 (41%)
Query: 20 ENSLQQTFQTLQNECQVSLNTVDSIETFVADINSG--RWDAILPQVAQ----LKLPRNKL 73
+ L + ++ E + N S + D +S + A + Q+ Q L+L K+
Sbjct: 9 QQRLTELLDAIKTEFDYASNEASSFKKVQEDYDSKYQQQAAEMQQIRQTVYDLELAHRKI 68
Query: 74 EDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHLLVRTYFDAHEAYQ 133
++ YE+ +L + ELDT RQ + G +Q+Q ++ + + + Q
Sbjct: 69 KEAYEEEILRL--KNELDTRD---RQMKN-GFQQQQQQQQQQQQQQ---------QQQQQ 113
Query: 134 DSTKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQ-FDLFRGTAAM 192
+SV+ S+ + Q H +PP Q D+ +
Sbjct: 114 QIVAPPAAPPAPPTPVTSLSVIDKSQYIVNPTQRAN---HVKEIPPFLQDLDIAKANPEF 170
Query: 193 K-QDVED--MYPTTLSHTIKFG---TKSHAE---CARFSPDGQFLVS-CSFDGFI-EVVW 241
K Q +E +Y S + + H+ C RFS DG+F+ + C+ + V
Sbjct: 171 KKQHLEYYVLYNPAFSKDLDIDMVHSLDHSSVVCCVRFSRDGKFIATGCNKTTQVFNVTT 230
Query: 242 DYLSGKL--KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCL 299
L KL + + + D T D + + FS D ++LA+G++D I++W + + + +
Sbjct: 231 GELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRII 290
Query: 300 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 359
+ L R H + + SL F DG +++S S D + RI L++ + A+ +
Sbjct: 291 KIL-RGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAV-SP 348
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVH--LFPKNPDHIVVCN 417
DG + S D TV+VWD ST + G+ +SV+ F N + I +
Sbjct: 349 DGKLIAAGSLDRTVRVWD--STTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGS 406
Query: 418 KTSSIYIMTLQGQVVKSFSSGKREGG--DFV-AACVSPKGEWIYCVGEDRNLYCFSHQSG 474
++ + L+G+ K + G DFV + C +P E+I +DR + + SG
Sbjct: 407 LDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASG 466
Query: 475 KLEHLMKVHEKDVIGVTHHPH----RNLLATYGEDCTMKLWK 512
+++ H VI V + + AT DC ++WK
Sbjct: 467 NPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWK 508
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 246 (91.7 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 76/309 (24%), Positives = 144/309 (46%)
Query: 206 HTIKFGTKSHAECARFS-PDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHD 264
HT++ G ++ F+ P G + + SFD ++ W +GK Y TF H
Sbjct: 128 HTLE-GHRNVVYAIAFNNPYGDKIATGSFDKTCKL-WSVETGKC-----YH---TFRGHT 177
Query: 265 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILS 324
++C+ F+ S ++A+GS D K+W I+SG+ + L HS + SL F+ G++I++
Sbjct: 178 AEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLT-GHSAEIISLSFNTSGNRIIT 236
Query: 325 TSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL 384
SFD T + +G+ + GH + ++ A+F D S ++T S D T K+WD + C+
Sbjct: 237 GSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCV 296
Query: 385 QTFKPPPPLRGGDASV-NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGG 443
T L G D + +S + + T+ I+ + V K G G
Sbjct: 297 AT------LTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKL--EGHE--G 346
Query: 444 DFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG 503
+ +P+G + D+ + Q+G+ +++ H ++ + +++ T
Sbjct: 347 EISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGS 406
Query: 504 EDCTMKLWK 512
+D T ++W+
Sbjct: 407 KDNTCRIWR 415
Score = 163 (62.4 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 53/209 (25%), Positives = 97/209 (46%)
Query: 178 PPGTQFDLFR-GTAAMKQ-DVEDMYPTT-LSHTIKFGTKSHAECARFSPDGQFLVSCSFD 234
PPG + + G K D+ D+ P+T +S ++ E + P L++ S
Sbjct: 12 PPGIMLEYEKSGQLKTKSIDLLDLDPSTDVSALVE-------EIQKAEP----LITASRS 60
Query: 235 GFIEVVWDYLSGKLKK--DLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWR 292
++++ L KL + + ++ + H + + ++ +GS D K+W
Sbjct: 61 DQVKLLIQRLQNKLGQHSNHKFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWD 120
Query: 293 IRSGQCLRRLERAHSEGVTSLVFSRD-GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSY 351
SG+ L LE H V ++ F+ G +I + SFD T ++ +++GK FRGH++
Sbjct: 121 TASGEELHTLE-GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAE 179
Query: 352 VNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
+ F + V T S D T K+WD++S
Sbjct: 180 IVCLSFNPQSTLVATGSMDTTAKLWDIQS 208
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 249 (92.7 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 80/322 (24%), Positives = 144/322 (44%)
Query: 201 PTTLSHTIKFGTKSH---AECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
P ++++ KF + H RFSPD + S DG ++V W +GKL Y
Sbjct: 161 PESVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKV-WAASTGKLI----Y--- 212
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
TF H + I +S D +ASGS D I++W + +G+ H V ++ FS
Sbjct: 213 -TFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSP 271
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
G+ ++S S+D + ++S +++K HS V+ DG+ + + ++D V++WD
Sbjct: 272 KGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWD 331
Query: 378 LKSTDCLQTF--KPPPPLRGGDASVNSVHLFPKNPDHIV-VCNKTSSIYIMTLQGQVVKS 434
+ CL+T + PP+ S N ++ D V + + + T QG K
Sbjct: 332 TSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKK 391
Query: 435 FSSGKREG--GDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVT- 491
+S G G + +P + ED + C+ + K+ ++ H+ V+GV
Sbjct: 392 YSLSGAFGVYGQSIPGR-TPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDT 450
Query: 492 -HHPHRNLLATYGEDCTMKLWK 512
+ + G D T+++W+
Sbjct: 451 CSTGEGRFMVSCGLDGTVRVWE 472
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 242 (90.2 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 91/321 (28%), Positives = 149/321 (46%)
Query: 204 LSHTIKFGTKSHAEC-ARFSPDGQFLVS-CSFDGFIEVVWDYLSGKLKKDLQYQADETFM 261
L HT++ + C RFS DG+FL + C+ +V++ +GKL LQ ++ +
Sbjct: 292 LLHTLEH---TSVICYVRFSADGKFLATGCNRAA---MVFNVETGKLITLLQEESSKR-- 343
Query: 262 MHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 321
D V + FS D + LA+G +D +I++W I + R L H + + SL FS+DG
Sbjct: 344 EGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLT-GHEQEIYSLDFSKDGKT 402
Query: 322 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 381
++S S D T + +++G+ K V +F+ DG + S D +++W T
Sbjct: 403 LVSGSGDRTVCLWDVEAGEQ-KLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGT 461
Query: 382 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKRE 441
Q L G + SV SV P ++V + ++I + LQ V S +E
Sbjct: 462 LVEQ-------LHGHEESVYSVAFSPDGK-YLVSGSLDNTIKLWELQC-VSNVAPSMYKE 512
Query: 442 GG----------DFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGV 490
GG DF+ + VSP G+WI +DR + +S S + ++ H VI V
Sbjct: 513 GGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISV 572
Query: 491 THHPHRNLLATYGEDCTMKLW 511
P+ + AT D ++W
Sbjct: 573 AVSPNGHCFATGSGDLRARIW 593
Score = 165 (63.1 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 69/291 (23%), Positives = 120/291 (41%)
Query: 241 WDYLSGKLKKDLQYQADETFMMHDETVLC-IEFSRDSEMLASGSQDGKIKVWRIRSGQCL 299
W S K+ + +V+C + FS D + LA+G + V+ + +G+ +
Sbjct: 275 WTVTSNVPNKEPPISVQLLHTLEHTSVICYVRFSADGKFLATGCNRAAM-VFNVETGKLI 333
Query: 300 RRLERAHS--EG---VTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
L+ S EG V S+ FS DG + + D RI + ++ + GH +
Sbjct: 334 TLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYS 393
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV 414
F+ DG +V+ S D TV +WD+++ + Q + D V +V +F + I
Sbjct: 394 LDFSKDGKTLVSGSGDRTVCLWDVEAGE--QKL-----ILHTDDGVTTV-MFSPDGQFIA 445
Query: 415 VCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN-----LYCF 469
+ I I T G +V+ G E VA SP G+++ D L C
Sbjct: 446 AGSLDKVIRIWTSSGTLVEQLH-GHEESVYSVA--FSPDGKYLVSGSLDNTIKLWELQCV 502
Query: 470 SH-------QSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 513
S+ + G + H+ ++ VT P + + +D T++ W P
Sbjct: 503 SNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSP 553
Score = 48 (22.0 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 12/47 (25%), Positives = 28/47 (59%)
Query: 58 AILPQ-VAQLKLPRNKLEDLYEQIVLEM---IELRELDTARAILRQT 100
A++ Q V L++ ++K++D YE+ + + +E R + A ++ Q+
Sbjct: 80 ALMKQTVMDLEMQQSKVKDRYEEEITSLKAQLEARRKEIASGVVPQS 126
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 224 (83.9 bits), Expect = 8.0e-18, P = 8.0e-18
Identities = 56/167 (33%), Positives = 91/167 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSPD Q+L + + G + + + SGK +Y D + +L I +S D + LA
Sbjct: 114 FSPDSQYLATGTHMGKVNI-FGVESGKK----EYSLDT----RGKFILSIAYSPDGKYLA 164
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
SG+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
L GH+S+V + F D + V++SSD +VKVWD+ + C+ TF
Sbjct: 224 LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTF 270
Score = 173 (66.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 58/241 (24%), Positives = 109/241 (45%)
Query: 230 SCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIK 289
S S D I + WD +GK K + + + + FS DS+ LA+G+ GK+
Sbjct: 81 SSSLDAHIRL-WDLENGKQMKSIDAGPVDAWTL--------AFSPDSQYLATGTHMGKVN 131
Query: 290 VWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHS 349
++ + SG+ L+ + + S+ +S DG + S + D I + +GKLL GH+
Sbjct: 132 IFGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 350 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN 409
+ F+ D +VTAS D +K++D++ + T L G + V +V P +
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHASWVLNVAFCPDD 244
Query: 410 PDHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYC 468
H V + S+ + + + + +F + + + G I VG+D+ ++
Sbjct: 245 T-HFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQ---VWGVKYNGNGSKIVSVGDDQEIHV 300
Query: 469 F 469
+
Sbjct: 301 Y 301
Score = 172 (65.6 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 42/157 (26%), Positives = 78/157 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
+SPDG++L S + DG I + +D +GKL L+ H + + FS DS++L
Sbjct: 156 YSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLV 206
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+ S DG IK++ ++ L H+ V ++ F D + +S+S D + ++ + +
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 265
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ F H V + +GS++V+ D + V+D
Sbjct: 266 CIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 60/279 (21%), Positives = 118/279 (42%)
Query: 228 LVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGK 287
+V+ S D ++V W + +L +LQ+ + H V+ ++ S + AS S D
Sbjct: 35 VVTGSLDDLVKV-WKWRDERL--ELQWSLEG----HQLGVVSVDISHTLPIAASSSLDAH 87
Query: 288 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD-STARIHGLKSGKLLKEFR 346
I++W + +G+ ++ ++ + T L FS D SQ L+T I G++SGK
Sbjct: 88 IRLWDLENGKQMKSIDAGPVDAWT-LAFSPD-SQYLATGTHMGKVNIFGVESGKKEYSLD 145
Query: 347 GHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLF 406
++ ++ DG + + + D + ++D+ + L T L G + S+
Sbjct: 146 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIRSLTFS 199
Query: 407 PKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNL 466
P + +V + I I +Q + SG VA C P D+++
Sbjct: 200 PDS-QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC--PDDTHFVSSSSDKSV 256
Query: 467 YCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
+ + H H+ V GV ++ + + + + G+D
Sbjct: 257 KVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDD 295
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 224 (83.9 bits), Expect = 8.0e-18, P = 8.0e-18
Identities = 56/167 (33%), Positives = 90/167 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSPD Q L + S G + + + +GK +Y D + +L I +S D + LA
Sbjct: 114 FSPDSQHLATGSHVGKVNI-FGVETGKK----EYSLDT----RGKFILSIAYSPDGKYLA 164
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
SG+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHAS 223
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
L GH S+V + F+ D + V++SSD +VKVWD+ + C+ TF
Sbjct: 224 LAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTF 270
Score = 180 (68.4 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 43/157 (27%), Positives = 78/157 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
+SPDG++L S + DG I + +D +GKL L+ H + + FS DS++L
Sbjct: 156 YSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG--------HAMPIRSLTFSTDSQLLV 206
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+ S DG IK++ ++ L H V ++ FS D + +S+S D + ++ + +
Sbjct: 207 TASDDGYIKIYDVQHASLAATLS-GHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSART 265
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ F H V + +GS++V+ D + V+D
Sbjct: 266 CVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 162 (62.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 59/285 (20%), Positives = 122/285 (42%)
Query: 222 SPDG-QFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
S DG + ++S S D ++V W + +L ++Q+ + H V+ ++ S ++A
Sbjct: 28 SNDGSELVISGSLDDLVKV-WKWSDERL--EMQWALEG----HQLGVVSVDVSPSGNIMA 80
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
S S D I++W + SG+ +R ++ A S+ FS D + + S I G+++GK
Sbjct: 81 SSSLDAHIRLWDLESGKQIRSID-AGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGK 139
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 400
++ ++ DG + + + D + ++D+ + L T L G +
Sbjct: 140 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPI 193
Query: 401 NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCV 460
S+ F + +V + I I +Q + + SG G + SP
Sbjct: 194 RSL-TFSTDSQLLVTASDDGYIKIYDVQHASLAATLSG--HGSWVLNVAFSPDDAHFVSS 250
Query: 461 GEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
D+++ + + H H+ V GV ++ + + + + G+D
Sbjct: 251 SSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDD 295
Score = 133 (51.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 53/221 (23%), Positives = 101/221 (45%)
Query: 299 LRRLERAHSEGVTSLVF---SRDGSQ-ILSTSFDSTARIHGLKSGKLLKEF--RGHSSYV 352
L + E AH + + S+ + S DGS+ ++S S D ++ +L ++ GH V
Sbjct: 8 LFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGV 67
Query: 353 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 412
+ G+ + ++S D +++WDL+S +++ P DA SV P + H
Sbjct: 68 VSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPV----DAW--SVAFSPDS-QH 120
Query: 413 IVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACV-SPKGEWIYCVGEDRNLYCFS 470
+ + + I ++ G+ K +S R G F+ + SP G+++ D + F
Sbjct: 121 LATGSHVGKVNIFGVETGK--KEYSLDTR--GKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 471 HQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+GKL H ++ H + +T LL T +D +K++
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIY 217
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 245 (91.3 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 69/207 (33%), Positives = 102/207 (49%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G S E R + + +V+ S G I V WD + K+ + T M H + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRV-WDLEAAKILR--------TLMGHKANICSL 111
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 112 DFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHT 170
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
++ L +GK++ EF GH+ VN F + + + SSD T++ WDL+ + +
Sbjct: 171 VKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGE 230
Query: 391 P-PLRGGDASVNSVHLFPKNPDHIVVC 416
P P+R + V V L P P +V C
Sbjct: 231 PGPVRYAGSWV--VGLSP--PPKVVGC 253
Score = 155 (59.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 47/210 (22%), Positives = 90/210 (42%)
Query: 305 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 363
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 364 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 423
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 130
Query: 424 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 481
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 482 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H V V HP+ LLA+ D T++ W
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 141 (54.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 258 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 316
+ + H V + + S +LA+G D ++ +W I C+ L H+ V S+ +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVRLN 72
Query: 317 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
I++ S + R+ L++ K+L+ GH + + F G V + S D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 377 DLKSTDCLQTFK 388
D++ C+ ++
Sbjct: 133 DIRRKGCVFRYR 144
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 41/177 (23%), Positives = 75/177 (42%)
Query: 337 KSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRG 395
K+ L+E H+S V+ + R++ T DC V +W + +C+ + L G
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTG 61
Query: 396 GDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 454
+ V SV L P+ ++V S SI + L+ + G + + + P G
Sbjct: 62 HTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYG 117
Query: 455 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
E++ +D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 223 (83.6 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 56/167 (33%), Positives = 91/167 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSPD Q+L + + G + + + SGK +Y D + +L I +S D + LA
Sbjct: 96 FSPDSQYLATGTHVGKVNI-FGVESGKK----EYSLDT----RGKFILSIAYSPDGKYLA 146
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
SG+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++
Sbjct: 147 SGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 205
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
L GH+S+V + F D + V++SSD +VKVWD+ + C+ TF
Sbjct: 206 LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 252
Score = 170 (64.9 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 41/157 (26%), Positives = 78/157 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
+SPDG++L S + DG I + +D +GKL L+ H + + FS DS++L
Sbjct: 138 YSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLV 188
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+ S DG IK++ ++ L H+ V ++ F D + +S+S D + ++ + +
Sbjct: 189 TASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 247
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ F H V + +GS++V+ D + ++D
Sbjct: 248 CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
Score = 168 (64.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 57/237 (24%), Positives = 108/237 (45%)
Query: 235 GFIEV-VWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRI 293
G + V +WD +GK K + + + + FS DS+ LA+G+ GK+ ++ +
Sbjct: 66 GVVSVRLWDLENGKQIKSIDAGPVDAWTL--------AFSPDSQYLATGTHVGKVNIFGV 117
Query: 294 RSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVN 353
SG+ L+ + + S+ +S DG + S + D I + +GKLL GH+ +
Sbjct: 118 ESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIR 176
Query: 354 DAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHI 413
F+ D +VTAS D +K++D++ + T L G + V +V P + H
Sbjct: 177 SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHASWVLNVAFCPDDT-HF 229
Query: 414 VVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 469
V + S+ + + + V +F + + + G I VG+D+ ++ +
Sbjct: 230 VSSSSDKSVKVWDVGTRTCVHTFFDHQDQ---VWGVKYNGNGSKIVSVGDDQEIHIY 283
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 223 (83.6 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 56/167 (33%), Positives = 91/167 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSPD Q+L + + G + + + SGK +Y D + +L I +S D + LA
Sbjct: 114 FSPDSQYLATGTHVGKVNI-FGVESGKK----EYSLDT----RGKFILSIAYSPDGKYLA 164
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
SG+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
L GH+S+V + F D + V++SSD +VKVWD+ + C+ TF
Sbjct: 224 LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 270
Score = 170 (64.9 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 44/157 (28%), Positives = 77/157 (49%)
Query: 230 SCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIK 289
S S D I + WD +GK K + + + + FS DS+ LA+G+ GK+
Sbjct: 81 SSSLDAHIRL-WDLENGKQIKSIDAGPVDAWTL--------AFSPDSQYLATGTHVGKVN 131
Query: 290 VWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHS 349
++ + SG+ L+ + + S+ +S DG + S + D I + +GKLL GH+
Sbjct: 132 IFGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 350 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 386
+ F+ D +VTAS D +K++D++ + T
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT 227
Score = 155 (59.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 39/146 (26%), Positives = 73/146 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
+SPDG++L S + DG I + +D +GKL L+ H + + FS DS++L
Sbjct: 156 YSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLV 206
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+ S DG IK++ ++ L H+ V ++ F D + +S+S D + ++ + +
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 265
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVT 366
+ F H V + +GS++V+
Sbjct: 266 CVHTFFDHQDQVWGVKYNGNGSKIVS 291
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 231 (86.4 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 79/258 (30%), Positives = 119/258 (46%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F H + V C++FS +++ LASGS D + +W ++ R H + VT + FS G
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFT-GHKDAVTCVNFSPSG 73
Query: 320 SQILSTSFDSTARIH--GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ S S D T RI +K + FR H++ V F +DG +VTAS D TVKVW
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQLLVTASDDKTVKVW- 130
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPD-HIVVC---NKTSSIYIMTLQGQVVK 433
ST Q F L +N V +PD ++V +KT ++ T + + V
Sbjct: 131 --STH-RQRF-----LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR-ECVH 181
Query: 434 SFSSGKREGGDFVAAC-VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 492
S+ E G FV P G I G D + + ++ +L ++H V ++
Sbjct: 182 SYC----EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSF 237
Query: 493 HPHRNLLATYGEDCTMKL 510
HP N L T D T+K+
Sbjct: 238 HPSGNYLITASSDSTLKI 255
Score = 228 (85.3 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 76/303 (25%), Positives = 131/303 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + C FS + + L S S D + ++W +K Q +A F H + V C+
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTL-MIWH-----MKP--QSRAYR-FTGHKDAVTCV 67
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
FS +LASGS+D +++W + + + + RAH+ V S+ F DG +++ S D T
Sbjct: 68 NFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKT 126
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
++ + L H ++V A F+ DG +V+AS D TVK+WD S +C+ ++
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE- 185
Query: 391 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVKSFSSGKREGGDFVAAC 449
GG V V P I +++ + T ++V+ + + A
Sbjct: 186 ---HGG--FVTYVDFHPSGTC-IAAAGMDNTVKVWDTRTHRLVQHY---QLHSAAVNALS 236
Query: 450 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 509
P G ++ D L G+L + + H+ V A+ G D +
Sbjct: 237 FHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Query: 510 LWK 512
+WK
Sbjct: 297 VWK 299
Score = 152 (58.6 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 56/214 (26%), Positives = 88/214 (41%)
Query: 299 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
L R + H + VT + FS + + S S DST I +K F GH V F+
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 359 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 418
G + + S D TV++W + + T R A+V SVH F + +V +
Sbjct: 71 PSGHLLASGSRDKTVRIW-VPNVKGESTV-----FRAHTATVRSVH-FCSDGQLLVTASD 123
Query: 419 TSSIYIMTLQGQVVKSFSSGKREGGDFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 477
++ + + Q F + ++V A SP G I +D+ + + S +
Sbjct: 124 DKTVKVWSTHRQ---RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECV 180
Query: 478 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H H V V HP +A G D T+K+W
Sbjct: 181 HSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 240 (89.5 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 68/199 (34%), Positives = 98/199 (49%)
Query: 203 TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMM 262
+L HTI+ G FSPDGQ L S S + I++ WD + LK T
Sbjct: 146 SLKHTIE-GHSDWVLSVAFSPDGQLLASGSAEKTIKL-WDSATCGLK--------HTLGG 195
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H VL + FS D +LASGS D IK+W SG LE HS + SL FS +G +
Sbjct: 196 HSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLE-GHSNKIESLAFSPNGQLL 254
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
S S D+T ++ +G +GHS V +F+ D + + S D T+K+WD +T
Sbjct: 255 ASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD-PATG 313
Query: 383 CLQ-TFKPPPPLRGGDASV 400
L+ + + P +R + S+
Sbjct: 314 ILKHSMRTPGIVRSIEFSI 332
Score = 154 (59.3 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 46/124 (37%), Positives = 64/124 (51%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
VED + L T++ G E FSPDG+ L S S D I++ WD SG LK+ L+
Sbjct: 26 VEDNWGPELQ-TLE-GHSDWIETVTFSPDGRLLASGSNDTTIKL-WDPASGGLKQTLEG- 81
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
H +V + FS + ++LASGS D IK+W S +E HS+ V S+ F
Sbjct: 82 -------HSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTME-GHSDRVESVAF 133
Query: 316 SRDG 319
S +G
Sbjct: 134 SPNG 137
Score = 154 (59.3 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 37/104 (35%), Positives = 52/104 (50%)
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
+T H + + + FS D +LASGS D IK+W SG + LE HS V S+ FS
Sbjct: 35 QTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLE-GHSSSVQSVAFSP 93
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDG 361
+G + S S D+T ++ S L GHS V F+ +G
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG 137
Score = 137 (53.3 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 296 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 355
G L+ LE HS+ + ++ FS DG + S S D+T ++ SG L + GHSS V
Sbjct: 31 GPELQTLE-GHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSV 89
Query: 356 IFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 385
F+ +G + + SSD T+K+W+ ++D L+
Sbjct: 90 AFSPNGQLLASGSSDTTIKLWN-SASDSLK 118
Score = 136 (52.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 49/206 (23%), Positives = 86/206 (41%)
Query: 312 SLVFSRDG--SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS 369
SL + +G ++ S +F ++ G L GHS +V F+ DG + + S+
Sbjct: 116 SLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSA 175
Query: 370 DCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS--SIYIMTL 427
+ T+K+WD + T GG + N V +PD ++ + ++ +I +
Sbjct: 176 EKTIKLWDSATCGLKHTL-------GGHS--NWVLPLVFSPDGRLLASGSNDATIKLWDP 226
Query: 428 QGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDV 487
+K G + +A SP G+ + D + + +G H +K H V
Sbjct: 227 PSGSLKHTLEGHSNKIESLA--FSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMV 284
Query: 488 IGVTHHPHRNLLATYGEDCTMKLWKP 513
+ V P LL + D T+KLW P
Sbjct: 285 LSVVFSPDSQLLESGSGDNTIKLWDP 310
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 239 (89.2 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 62/254 (24%), Positives = 118/254 (46%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
TF H ++C+ F+ S ++A+GS D K+W I++G+ + L R HS + SL F+
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTL-RGHSAEIISLSFNTS 230
Query: 319 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
G +I++ SFD T + +G+ + GH + ++ A F D S ++T S D T K+WD
Sbjct: 231 GDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDA 290
Query: 379 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSG 438
+ C+ T L G D + F I + + I + + K +
Sbjct: 291 TNGKCVAT------LTGHDDEILD-SCFDYTGKLIATASADGTARIFSAATR--KCIAKL 341
Query: 439 KREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNL 498
+ G+ +P+G + D+ + Q+G+ +++ H ++ + N+
Sbjct: 342 EGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNI 401
Query: 499 LATYGEDCTMKLWK 512
+ T +D T ++W+
Sbjct: 402 VITGSKDNTCRIWR 415
Score = 214 (80.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 65/252 (25%), Positives = 115/252 (45%)
Query: 263 HDETVLCIEFSRD-SEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 321
H V I F+ + +A+GS D K+W + +G+C R H+ + L F+ +
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTF-RGHTAEIVCLSFNPQSTL 191
Query: 322 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 381
+ + S D+TA++ +++G+ + RGHS+ + F G R++T S D TV VWD
Sbjct: 192 VATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDA--- 248
Query: 382 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV--CNKTSSIYIMTLQGQVVKSFSSGK 439
T + L G A ++S F + I+ +KT ++ T G+ V + +
Sbjct: 249 ---DTGRKVNILIGHCAEISSAS-FNWDCSLILTGSMDKTCKLWDAT-NGKCVATLTGHD 303
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 499
E + +C G+ I D FS + K ++ HE ++ ++ +P N L
Sbjct: 304 DE---ILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHL 360
Query: 500 ATYGEDCTMKLW 511
T D T ++W
Sbjct: 361 LTGSSDKTARIW 372
Score = 202 (76.2 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 47/168 (27%), Positives = 82/168 (48%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
F+ G +++ SFD + VVWD +G+ K ++ + H + F+ D ++
Sbjct: 227 FNTSGDRIITGSFDHTV-VVWDADTGR-KVNI-------LIGHCAEISSASFNWDCSLIL 277
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+GS D K+W +G+C+ L H + + F G I + S D TARI + K
Sbjct: 278 TGSMDKTCKLWDATNGKCVATLT-GHDDEILDSCFDYTGKLIATASADGTARIFSAATRK 336
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
+ + GH ++ F G+ ++T SSD T ++WD ++ CLQ +
Sbjct: 337 CIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLE 384
Score = 180 (68.4 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 45/169 (26%), Positives = 83/169 (49%)
Query: 208 IKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
I G + A F+ D +++ S D ++ WD +GK T HD+ +
Sbjct: 256 ILIGHCAEISSASFNWDCSLILTGSMDKTCKL-WDATNGKCVA--------TLTGHDDEI 306
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
L F +++A+ S DG +++ + +C+ +LE H ++ + F+ G+ +L+ S
Sbjct: 307 LDSCFDYTGKLIATASADGTARIFSAATRKCIAKLE-GHEGEISKISFNPQGNHLLTGSS 365
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
D TARI ++G+ L+ GH+ + F G+ V+T S D T ++W
Sbjct: 366 DKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 68/279 (24%), Positives = 123/279 (44%)
Query: 247 KLKKDLQYQADETFMM------HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLR 300
+L++ L ++ TF + H + + ++ +GS D K+W SG+ L
Sbjct: 69 RLQEKLGQNSNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELN 128
Query: 301 RLERAHSEGVTSLVFSRD-GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 359
LE H V ++ F+ G +I + SFD T ++ +++GK FRGH++ + F
Sbjct: 129 TLE-GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNP 187
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 419
+ V T S D T K+WD+++ + + T LRG A + S+ F + D I+ T
Sbjct: 188 QSTLVATGSMDTTAKLWDIQNGEEVYT------LRGHSAEIISLS-FNTSGDRII----T 236
Query: 420 SSIYIMTLQGQVVKSFSSGKREGGDFVAACV---SPKGEW---IYCVGE-DRNLYCFSHQ 472
S + T+ VV +G R+ + C S W + G D+ +
Sbjct: 237 GS-FDHTV---VVWDADTG-RKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDAT 291
Query: 473 SGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+GK + H+ +++ L+AT D T +++
Sbjct: 292 NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIF 330
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 241 (89.9 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 77/315 (24%), Positives = 141/315 (44%)
Query: 199 MYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADE 258
M TL K G K CA F+P+ + L + S D + ++W+ L+ K + ++
Sbjct: 5 MEDPTLERHFK-GHKDVISCADFNPNNKQLATGSCDKSL-MIWN-LAPKARA---FR--- 55
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR-SGQCLRRLERAHSEGVTSLVFSR 317
F+ H + + + F+ ++AS S+D +++W G+ + +AH+ V S+ FSR
Sbjct: 56 -FVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGEST--VFKAHTASVRSVHFSR 112
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
DG ++++ S D + ++ G++ K L H+++V A F+ DG + + D TV++WD
Sbjct: 113 DGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWD 172
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 437
S C+ F GG A+ F + I ++I I ++ K
Sbjct: 173 TSSHQCINIFTD----YGGSATFVD---FNSSGTCIASSGADNTIKIWDIRTN--KLIQH 223
Query: 438 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 497
K P G ++ D + G+L + + H+ V+ VT +
Sbjct: 224 YKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGD 283
Query: 498 LLATYGEDCTMKLWK 512
L A+ G D + +WK
Sbjct: 284 LFASGGADSQVLMWK 298
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 223 (83.6 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 57/167 (34%), Positives = 89/167 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSPD QFL + S G + + + +GK +Y D + +L I +S D + LA
Sbjct: 114 FSPDSQFLATGSHVGKVNI-FGVETGKK----EYSLDT----RGKFILSIAYSPDGKYLA 164
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
SG+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
L GH S+V + F D + V++SSD +VKVWD + C+ TF
Sbjct: 224 LAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTF 270
Score = 178 (67.7 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 54/203 (26%), Positives = 93/203 (45%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S G S S D I + WD +GK K + + + + FS DS+ LA+
Sbjct: 73 SHTGSIAASSSLDAHIRL-WDLETGKQIKSIDAGPVDAWSL--------AFSPDSQFLAT 123
Query: 282 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 341
GS GK+ ++ + +G+ L+ + + S+ +S DG + S + D I + +GKL
Sbjct: 124 GSHVGKVNIFGVETGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 342 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVN 401
L GH+ + F+ D +VTAS D +K++D++ + T L G + V
Sbjct: 183 LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHGSWVL 236
Query: 402 SVHLFPKNPDHIVVCNKTSSIYI 424
+V P + H V + S+ +
Sbjct: 237 NVAFCPDDT-HFVSSSSDKSVKV 258
Score = 166 (63.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 41/157 (26%), Positives = 75/157 (47%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
+SPDG++L S + DG I + +D +GKL L+ H + + FS DS++L
Sbjct: 156 YSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLV 206
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+ S DG IK++ ++ L H V ++ F D + +S+S D + ++ +
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLS-GHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRT 265
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ F H V + GS++V+ D + ++D
Sbjct: 266 CVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 156 (60.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 66/284 (23%), Positives = 121/284 (42%)
Query: 224 DG-QFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 282
DG + ++S S D ++V W + KL DLQ+ T H V+ ++ S + AS
Sbjct: 30 DGSETVISGSLDDLVKV-WKWNDEKL--DLQW----TLEGHQLGVVSVDISHTGSIAASS 82
Query: 283 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDSTARIHGLKSGKL 341
S D I++W + +G+ ++ ++ A SL FS D SQ L+T S I G+++GK
Sbjct: 83 SLDAHIRLWDLETGKQIKSID-AGPVDAWSLAFSPD-SQFLATGSHVGKVNIFGVETGKK 140
Query: 342 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVN 401
++ ++ DG + + + D + ++D+ + L T L G +
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIR 194
Query: 402 SVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG 461
S+ P + +V + I I +Q + SG VA C P
Sbjct: 195 SLTFSPDS-QLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFC--PDDTHFVSSS 251
Query: 462 EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
D+++ + + H H+ V GV ++ + + + G+D
Sbjct: 252 SDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDD 295
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 52/221 (23%), Positives = 99/221 (44%)
Query: 299 LRRLERAHSEGVTSLVFSR---DGSQ-ILSTSFDSTARIHGLKSGKLLKEF--RGHSSYV 352
L + E+AH + + S+ + + DGS+ ++S S D ++ KL ++ GH V
Sbjct: 8 LFKQEQAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGV 67
Query: 353 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 412
++ GS ++S D +++WDL +T K + G S+ P +
Sbjct: 68 VSVDISHTGSIAASSSLDAHIRLWDL------ETGKQIKSIDAGPVDAWSLAFSPDS-QF 120
Query: 413 IVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACV-SPKGEWIYCVGEDRNLYCFS 470
+ + + I ++ G+ K +S R G F+ + SP G+++ D + F
Sbjct: 121 LATGSHVGKVNIFGVETGK--KEYSLDTR--GKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 471 HQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+GKL H ++ H + +T P LL T +D +K++
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 223 (83.6 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 57/167 (34%), Positives = 89/167 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSPD QFL + S G + + + +GK +Y D + +L I +S D + LA
Sbjct: 114 FSPDSQFLATGSHVGKVNI-FGVETGKK----EYSLDT----RGKFILSIAYSPDGKYLA 164
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
SG+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
L GH S+V + F D + V++SSD +VKVWD + C+ TF
Sbjct: 224 LAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTF 270
Score = 178 (67.7 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 54/203 (26%), Positives = 93/203 (45%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S G S S D I + WD +GK K + + + + FS DS+ LA+
Sbjct: 73 SHTGSIAASSSLDAHIRL-WDLETGKQIKSIDAGPVDAWSL--------AFSPDSQFLAT 123
Query: 282 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 341
GS GK+ ++ + +G+ L+ + + S+ +S DG + S + D I + +GKL
Sbjct: 124 GSHVGKVNIFGVETGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 342 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVN 401
L GH+ + F+ D +VTAS D +K++D++ + T L G + V
Sbjct: 183 LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHGSWVL 236
Query: 402 SVHLFPKNPDHIVVCNKTSSIYI 424
+V P + H V + S+ +
Sbjct: 237 NVAFCPDDT-HFVSSSSDKSVKV 258
Score = 166 (63.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 41/157 (26%), Positives = 75/157 (47%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
+SPDG++L S + DG I + +D +GKL L+ H + + FS DS++L
Sbjct: 156 YSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLV 206
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+ S DG IK++ ++ L H V ++ F D + +S+S D + ++ +
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLS-GHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRT 265
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ F H V + GS++V+ D + ++D
Sbjct: 266 CVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 64/279 (22%), Positives = 118/279 (42%)
Query: 228 LVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGK 287
++S S D ++V W + KL DLQ+ T H V+ ++ S + AS S D
Sbjct: 35 VISGSLDDLVKV-WKWNDEKL--DLQW----TLEGHQLGVVSVDISHTGSIAASSSLDAH 87
Query: 288 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDSTARIHGLKSGKLLKEFR 346
I++W + +G+ ++ ++ A SL FS D SQ L+T S I G+++GK
Sbjct: 88 IRLWDLETGKQIKSID-AGPVDAWSLAFSPD-SQFLATGSHVGKVNIFGVETGKKEYSLD 145
Query: 347 GHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLF 406
++ ++ DG + + + D + ++D+ + L T L G + S+
Sbjct: 146 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIRSLTFS 199
Query: 407 PKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNL 466
P + +V + I I +Q + SG VA C P D+++
Sbjct: 200 PDS-QLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFC--PDDTHFVSSSSDKSV 256
Query: 467 YCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
+ + H H+ V GV ++ + + + G+D
Sbjct: 257 KVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDD 295
Score = 132 (51.5 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 51/221 (23%), Positives = 99/221 (44%)
Query: 299 LRRLERAHSEGVTSLVFSRD---GSQ-ILSTSFDSTARIHGLKSGKLLKEF--RGHSSYV 352
L + E+AH + + S+ + ++ GS+ ++S S D ++ KL ++ GH V
Sbjct: 8 LFKQEQAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGV 67
Query: 353 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 412
++ GS ++S D +++WDL +T K + G S+ P +
Sbjct: 68 VSVDISHTGSIAASSSLDAHIRLWDL------ETGKQIKSIDAGPVDAWSLAFSPDS-QF 120
Query: 413 IVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACV-SPKGEWIYCVGEDRNLYCFS 470
+ + + I ++ G+ K +S R G F+ + SP G+++ D + F
Sbjct: 121 LATGSHVGKVNIFGVETGK--KEYSLDTR--GKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 471 HQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+GKL H ++ H + +T P LL T +D +K++
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 223 (83.6 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 56/167 (33%), Positives = 91/167 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSPD Q+L + + G + + + SGK +Y D + +L I +S D + LA
Sbjct: 114 FSPDSQYLATGTHVGKVNI-FGVESGKK----EYSLDT----RGKFILSIAYSPDGKYLA 164
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
SG+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
L GH+S+V + F D + V++SSD +VKVWD+ + C+ TF
Sbjct: 224 LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 270
Score = 172 (65.6 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 59/241 (24%), Positives = 109/241 (45%)
Query: 230 SCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIK 289
S S D I + WD +GK K + + + + FS DS+ LA+G+ GK+
Sbjct: 81 SSSLDAHIRL-WDLENGKQIKSIDAGPVDAWTL--------AFSPDSQYLATGTHVGKVN 131
Query: 290 VWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHS 349
++ + SG+ L+ + + S+ +S DG + S + D I + +GKLL GH+
Sbjct: 132 IFGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 350 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN 409
+ F+ D +VTAS D +K++D++ + T L G + V +V P +
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHASWVLNVAFCPDD 244
Query: 410 PDHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYC 468
H V + S+ + + + V +F + + + G I VG+D+ ++
Sbjct: 245 T-HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ---VWGVKYNGNGSKIVSVGDDQEIHI 300
Query: 469 F 469
+
Sbjct: 301 Y 301
Score = 170 (64.9 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 41/157 (26%), Positives = 78/157 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
+SPDG++L S + DG I + +D +GKL L+ H + + FS DS++L
Sbjct: 156 YSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLV 206
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+ S DG IK++ ++ L H+ V ++ F D + +S+S D + ++ + +
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 265
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ F H V + +GS++V+ D + ++D
Sbjct: 266 CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 62/283 (21%), Positives = 120/283 (42%)
Query: 224 DGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 283
+ + +V+ S D ++V W + KL DLQ+ + H V+ ++ S + AS S
Sbjct: 31 NSETVVTGSLDDLVKV-WKWRDEKL--DLQWSLEG----HQLGVVSVDISHTLPIAASSS 83
Query: 284 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD-STARIHGLKSGKLL 342
D I++W + +G+ ++ ++ + T L FS D SQ L+T I G++SGK
Sbjct: 84 LDAHIRLWDLENGKQIKSIDAGPVDAWT-LAFSPD-SQYLATGTHVGKVNIFGVESGKKE 141
Query: 343 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNS 402
++ ++ DG + + + D + ++D+ + L T L G + S
Sbjct: 142 YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIRS 195
Query: 403 VHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGE 462
+ P + +V + I I +Q + SG VA C P
Sbjct: 196 LTFSPDS-QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC--PDDTHFVSSSS 252
Query: 463 DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
D+++ + + H H+ V GV ++ + + + + G+D
Sbjct: 253 DKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 295
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 223 (83.6 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 56/167 (33%), Positives = 91/167 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSPD Q+L + + G + + + SGK +Y D + +L I +S D + LA
Sbjct: 114 FSPDSQYLATGTHVGKVNI-FGVESGKK----EYSLDT----RGKFILSIAYSPDGKYLA 164
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
SG+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
L GH+S+V + F D + V++SSD +VKVWD+ + C+ TF
Sbjct: 224 LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 270
Score = 172 (65.6 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 59/241 (24%), Positives = 109/241 (45%)
Query: 230 SCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIK 289
S S D I + WD +GK K + + + + FS DS+ LA+G+ GK+
Sbjct: 81 SSSLDAHIRL-WDLENGKQIKSIDAGPVDAWTL--------AFSPDSQYLATGTHVGKVN 131
Query: 290 VWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHS 349
++ + SG+ L+ + + S+ +S DG + S + D I + +GKLL GH+
Sbjct: 132 IFGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 350 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN 409
+ F+ D +VTAS D +K++D++ + T L G + V +V P +
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHASWVLNVAFCPDD 244
Query: 410 PDHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYC 468
H V + S+ + + + V +F + + + G I VG+D+ ++
Sbjct: 245 T-HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ---VWGVKYNGNGSKIVSVGDDQEIHI 300
Query: 469 F 469
+
Sbjct: 301 Y 301
Score = 170 (64.9 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 41/157 (26%), Positives = 78/157 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
+SPDG++L S + DG I + +D +GKL L+ H + + FS DS++L
Sbjct: 156 YSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLV 206
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+ S DG IK++ ++ L H+ V ++ F D + +S+S D + ++ + +
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 265
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ F H V + +GS++V+ D + ++D
Sbjct: 266 CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 146 (56.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 61/283 (21%), Positives = 120/283 (42%)
Query: 224 DGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 283
+ + +V+ S D ++V W + +L DLQ+ + H V+ ++ S + AS S
Sbjct: 31 NSETVVTGSLDDLVKV-WKWRDERL--DLQWSLEG----HQLGVVSVDISHTLPIAASSS 83
Query: 284 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD-STARIHGLKSGKLL 342
D I++W + +G+ ++ ++ + T L FS D SQ L+T I G++SGK
Sbjct: 84 LDAHIRLWDLENGKQIKSIDAGPVDAWT-LAFSPD-SQYLATGTHVGKVNIFGVESGKKE 141
Query: 343 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNS 402
++ ++ DG + + + D + ++D+ + L T L G + S
Sbjct: 142 YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIRS 195
Query: 403 VHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGE 462
+ P + +V + I I +Q + SG VA C P
Sbjct: 196 LTFSPDS-QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC--PDDTHFVSSSS 252
Query: 463 DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
D+++ + + H H+ V GV ++ + + + + G+D
Sbjct: 253 DKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 295
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 223 (83.6 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 56/167 (33%), Positives = 91/167 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSPD Q+L + + G + + + SGK +Y D + +L I +S D + LA
Sbjct: 114 FSPDSQYLATGTHVGKVNI-FGVESGKK----EYSLDT----RGKFILSIAYSPDGKYLA 164
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
SG+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
L GH+S+V + F D + V++SSD +VKVWD+ + C+ TF
Sbjct: 224 LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 270
Score = 171 (65.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 42/157 (26%), Positives = 78/157 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
+SPDG++L S + DG I + +D +GKL L+ H + + FS DS++L
Sbjct: 156 YSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLV 206
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+ S DG IK++ ++ L H+ V ++ F D + +S+S D + ++ + +
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 265
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ F H V + +GS++V+ D + V+D
Sbjct: 266 CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 171 (65.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 59/241 (24%), Positives = 109/241 (45%)
Query: 230 SCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIK 289
S S D I + WD +GK K + + + + FS DS+ LA+G+ GK+
Sbjct: 81 SSSLDAHIRL-WDLDNGKQIKSIDAGPVDAWTL--------AFSPDSQYLATGTHVGKVN 131
Query: 290 VWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHS 349
++ + SG+ L+ + + S+ +S DG + S + D I + +GKLL GH+
Sbjct: 132 IFGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 350 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN 409
+ F+ D +VTAS D +K++D++ + T L G + V +V P +
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHASWVLNVAFCPDD 244
Query: 410 PDHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYC 468
H V + S+ + + + V +F + + + G I VG+D+ ++
Sbjct: 245 T-HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ---VWGVKYNGNGSKIVSVGDDQEIHV 300
Query: 469 F 469
+
Sbjct: 301 Y 301
Score = 145 (56.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 61/283 (21%), Positives = 120/283 (42%)
Query: 224 DGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 283
+ + +V+ S D ++V W + +L DLQ+ + H V+ ++ S + AS S
Sbjct: 31 NSETVVTGSLDDLVKV-WKWCDERL--DLQWSLEG----HQLGVVSVDISHTLPIAASSS 83
Query: 284 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD-STARIHGLKSGKLL 342
D I++W + +G+ ++ ++ + T L FS D SQ L+T I G++SGK
Sbjct: 84 LDAHIRLWDLDNGKQIKSIDAGPVDAWT-LAFSPD-SQYLATGTHVGKVNIFGVESGKKE 141
Query: 343 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNS 402
++ ++ DG + + + D + ++D+ + L T L G + S
Sbjct: 142 YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIRS 195
Query: 403 VHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGE 462
+ P + +V + I I +Q + SG VA C P
Sbjct: 196 LTFSPDS-QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC--PDDTHFVSSSS 252
Query: 463 DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
D+++ + + H H+ V GV ++ + + + + G+D
Sbjct: 253 DKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 295
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 242 (90.2 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 78/334 (23%), Positives = 147/334 (44%)
Query: 189 TAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKL 248
T++ + + + LS + + G + CA F P + + SCS D + VW++
Sbjct: 24 TSSKITEQQTTHDPALSRSFR-GHEDIITCADFDPKMRQVASCSKDSIV-YVWNF----- 76
Query: 249 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 308
K Q F+ H V C+++S D E +AS QD +I++W+ + Q + +AH
Sbjct: 77 KPQ---QRPFKFVGHKGAVYCVKYSPDGETIASCGQDRQIRLWQ-NTVQSKCSIIKAHCG 132
Query: 309 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 368
+ S+ FS DG +LS+S D T ++ L+ K + F GH ++V + + D V + S
Sbjct: 133 AIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGS 192
Query: 369 SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHI--VVCNKTSSIYIMT 426
D TV +WDL + + + ++ ++ + + D + V+ + + I +
Sbjct: 193 DDKTVMLWDLNFQKIVSKYST----LDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISS 248
Query: 427 LQGQVVK--SFSSGKR----EGGDFVAACVS--PKGEWIYCVGEDRNLYCFSHQSGKLEH 478
+K S K D +S P G ++ G D + + + G+ +
Sbjct: 249 SFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIY 308
Query: 479 LMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ ++KD+ V + + AT G +WK
Sbjct: 309 TLYSNDKDITTVQFNQSGDYFATGGSQNLCMVWK 342
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 222 (83.2 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 59/184 (32%), Positives = 93/184 (50%)
Query: 201 PTTLS-HTIKFGTKSHAE--CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
PT L+ ++F + H E C+ FSPDG+ L++ S DG + VW SG+L L A
Sbjct: 11 PTRLAVGRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCV-YVWGTKSGRL---LWRLAG 66
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
H V FS D ++AS S D I++W + +CL L + H V ++ FS
Sbjct: 67 -----HRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVL-KGHQRSVETVSFSP 120
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
D Q+ S +D A + ++SG+ + GH + + F+ + T S D TV +WD
Sbjct: 121 DSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWD 180
Query: 378 LKST 381
L+++
Sbjct: 181 LRAS 184
Score = 196 (74.1 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 68/251 (27%), Positives = 107/251 (42%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H V C FS D L + S DG + VW +SG+ L RL H V S FS DG I
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLA-GHRGPVKSCCFSPDGRLI 83
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
S+S D + R+ + K L +GH V F+ D ++ + D VW+++S
Sbjct: 84 ASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGR 143
Query: 383 CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQV-VKSFSSGKRE 441
+ L G S+ S P + D + + S+++I L+ V S+ + +
Sbjct: 144 RVHL------LVGHCDSIQSSDFSPTS-DSLATGSWDSTVHIWDLRASTPVVSYHNLEGH 196
Query: 442 GGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLA 500
G+ C S G + G D+ + + + L +K H V + P LA
Sbjct: 197 TGNISCLCYSASG--LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLA 254
Query: 501 TYGEDCTMKLW 511
+ G T+K+W
Sbjct: 255 SAGYSRTVKVW 265
Score = 194 (73.4 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 55/186 (29%), Positives = 93/186 (50%)
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDE 265
H +K G + E FSPD + L S +D +VW+ SG+ + L + H +
Sbjct: 104 HVLK-GHQRSVETVSFSPDSKQLASGGWDKRA-IVWEVQSGR-RVHL-------LVGHCD 153
Query: 266 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCL---RRLERAHSEGVTSLVFSRDGSQI 322
++ +FS S+ LA+GS D + +W +R+ + LE H+ ++ L +S G +
Sbjct: 154 SIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLE-GHTGNISCLCYSASGL-L 211
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
S S+D T + + L + +GH+ +VN F+ D ++ +A TVKVWD +
Sbjct: 212 ASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGK 271
Query: 383 CLQTFK 388
CL+T K
Sbjct: 272 CLETLK 277
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 38/116 (32%), Positives = 58/116 (50%)
Query: 292 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSY 351
R+ G+ +R + H E V FS DG +L+ S D + G KSG+LL GH
Sbjct: 13 RLAVGR-VRFYGQHHGE-VNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGP 70
Query: 352 VNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFP 407
V F+ DG + ++SSD ++++WD+ + CL L+G SV +V P
Sbjct: 71 VKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHV------LKGHQRSVETVSFSP 120
Score = 145 (56.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 42/149 (28%), Positives = 70/149 (46%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSP L + S+D + + WD L+ + H + C+ +S S +LA
Sbjct: 160 FSPTSDSLATGSWDSTVHI-WD-----LRASTPVVSYHNLEGHTGNISCLCYSA-SGLLA 212
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
SGS D I VW+ + +L + H+ V SL FS D ++ S + T ++ +GK
Sbjct: 213 SGSWDKTICVWKPTTNNLPLQL-KGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGK 271
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASS 369
L+ +G + IFT DG +V+ ++
Sbjct: 272 CLETLKGMLDVAHACIFTPDGKLLVSGAA 300
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 236 (88.1 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 80/336 (23%), Positives = 145/336 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G K+D ++ P G +S F P +VS S D I+V WD+ +G
Sbjct: 83 GPIGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKV-WDHETGD 141
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 142 FERTLKG--------HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMH-GHD 192
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
V+S+ +G I+S S D T ++ + +G +K F GH +V DG+ + ++
Sbjct: 193 HNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASS 252
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA-SVNSVH--LFPKNPDHIVVCNKTSSIYI 424
S+D TV+VW + + +C + + + + S H + K +
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLL 312
Query: 425 MTLQGQVVKSF--SSGK----REGGD-FV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKL 476
+ + +K + S G G D +V V P G++I +D+ L + +++ +
Sbjct: 313 SGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRC 372
Query: 477 EHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ HE V + H + T D T+K+W+
Sbjct: 373 TKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 190 (71.9 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 59/212 (27%), Positives = 104/212 (49%)
Query: 306 HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV 365
H VT ++F S I+S S D+T ++ ++G + +GH+ V D F + G +
Sbjct: 107 HRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLA 166
Query: 366 TASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM 425
+ S+D T+K+WD + +C++T + G D +V+SV + P N DHIV ++ +I +
Sbjct: 167 SCSADMTIKLWDFQGFECIRT------MHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMW 219
Query: 426 TLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHE 484
+ G VK+F+ G RE V + G I D+ + + + + + ++ HE
Sbjct: 220 EVATGYCVKTFT-GHREWVRMVRP--NQDGTLIASSSNDQTVRVWVVATKECKAELREHE 276
Query: 485 KDVIGVTHHP---HRNLLATYGEDCTMKLWKP 513
V ++ P H +L G + T K KP
Sbjct: 277 HVVECISWAPESAHPTILEATGSE-TKKSGKP 307
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 57/205 (27%), Positives = 83/205 (40%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLSG 246
+A + M+ + +K T H E R + DG + S S D + V W +
Sbjct: 209 SASRDKTIKMWEVATGYCVKTFT-GHREWVRMVRPNQDGTLIASSSNDQTVRV-WVVATK 266
Query: 247 KLKKDLQYQAD--ETFMMHDE----TVLCIEFSRDSE------MLASGSQDGKIKVWRIR 294
+ K +L+ E E T+L S + L SGS+D IK+W +
Sbjct: 267 ECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
G CL L H V ++ G I+S + D T RI K+ + K H +V
Sbjct: 327 IGMCLMTLV-GHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTS 385
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLK 379
F VVT S D TVKVW+ +
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 240 (89.5 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 62/185 (33%), Positives = 93/185 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G S E R + + +V+ S G I V WD + K+ + T M H + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRV-WDLEAAKILR--------TLMGHKANICSL 111
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 112 DFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHT 170
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
++ L +GK++ EF GH+ VN F + + + SSD T++ WDL+ + +
Sbjct: 171 VKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGE 230
Query: 391 P-PLR 394
P P+R
Sbjct: 231 PGPVR 235
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/210 (22%), Positives = 90/210 (42%)
Query: 305 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 363
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 364 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 423
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 130
Query: 424 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 481
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 482 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H V V HP+ LLA+ D T++ W
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 141 (54.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 258 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 316
+ + H V + + S +LA+G D ++ +W I C+ L H+ V S+ +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVRLN 72
Query: 317 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
I++ S + R+ L++ K+L+ GH + + F G V + S D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 377 DLKSTDCLQTFK 388
D++ C+ ++
Sbjct: 133 DIRRKGCVFRYR 144
Score = 140 (54.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 46/188 (24%), Positives = 85/188 (45%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
V D+ + T+ G K++ F P G+F+ S S D I++ WD +K ++
Sbjct: 89 VWDLEAAKILRTL-MGHKANICSLDFHPYGEFVASGSQDTNIKL-WDIR----RKGCVFR 142
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
+ H + V C+ FS D + LAS + D +K+W + +G+ + H+ V + F
Sbjct: 143 ----YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP-GHTGPVNVVEF 197
Query: 316 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 375
+ + S S D T R L+ +++ G V +F DG + + D +++V
Sbjct: 198 HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRV 256
Query: 376 WDLKSTDC 383
+ + C
Sbjct: 257 YGWEPERC 264
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 41/177 (23%), Positives = 75/177 (42%)
Query: 337 KSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRG 395
K+ L+E H+S V+ + R++ T DC V +W + +C+ + L G
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTG 61
Query: 396 GDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 454
+ V SV L P+ ++V S SI + L+ + G + + + P G
Sbjct: 62 HTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYG 117
Query: 455 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
E++ +D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 240 (89.5 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 62/185 (33%), Positives = 93/185 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G S E R + + +V+ S G I V WD + K+ + T M H + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRV-WDLEAAKILR--------TLMGHKANICSL 111
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 112 DFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHT 170
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
++ L +GK++ EF GH+ VN F + + + SSD T++ WDL+ + +
Sbjct: 171 VKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGE 230
Query: 391 P-PLR 394
P P+R
Sbjct: 231 PGPVR 235
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/210 (22%), Positives = 90/210 (42%)
Query: 305 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 363
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 364 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 423
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 130
Query: 424 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 481
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 482 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H V V HP+ LLA+ D T++ W
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 141 (54.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 258 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 316
+ + H V + + S +LA+G D ++ +W I C+ L H+ V S+ +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVRLN 72
Query: 317 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
I++ S + R+ L++ K+L+ GH + + F G V + S D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 377 DLKSTDCLQTFK 388
D++ C+ ++
Sbjct: 133 DIRRKGCVFRYR 144
Score = 140 (54.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 46/188 (24%), Positives = 85/188 (45%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
V D+ + T+ G K++ F P G+F+ S S D I++ WD +K ++
Sbjct: 89 VWDLEAAKILRTL-MGHKANICSLDFHPYGEFVASGSQDTNIKL-WDIR----RKGCVFR 142
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
+ H + V C+ FS D + LAS + D +K+W + +G+ + H+ V + F
Sbjct: 143 ----YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP-GHTGPVNVVEF 197
Query: 316 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 375
+ + S S D T R L+ +++ G V +F DG + + D +++V
Sbjct: 198 HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRV 256
Query: 376 WDLKSTDC 383
+ + C
Sbjct: 257 YGWEPERC 264
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 41/177 (23%), Positives = 75/177 (42%)
Query: 337 KSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRG 395
K+ L+E H+S V+ + R++ T DC V +W + +C+ + L G
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTG 61
Query: 396 GDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 454
+ V SV L P+ ++V S SI + L+ + G + + + P G
Sbjct: 62 HTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYG 117
Query: 455 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
E++ +D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 240 (89.5 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 62/185 (33%), Positives = 93/185 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G S E R + + +V+ S G I V WD + K+ + T M H + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRV-WDLEAAKILR--------TLMGHKANICSL 111
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 112 DFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHT 170
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
++ L +GK++ EF GH+ VN F + + + SSD T++ WDL+ + +
Sbjct: 171 VKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGE 230
Query: 391 P-PLR 394
P P+R
Sbjct: 231 PGPVR 235
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/210 (22%), Positives = 90/210 (42%)
Query: 305 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 363
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 364 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 423
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 130
Query: 424 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 481
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 482 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H V V HP+ LLA+ D T++ W
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 141 (54.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 258 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 316
+ + H V + + S +LA+G D ++ +W I C+ L H+ V S+ +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVRLN 72
Query: 317 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
I++ S + R+ L++ K+L+ GH + + F G V + S D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 377 DLKSTDCLQTFK 388
D++ C+ ++
Sbjct: 133 DIRRKGCVFRYR 144
Score = 140 (54.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 46/188 (24%), Positives = 85/188 (45%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
V D+ + T+ G K++ F P G+F+ S S D I++ WD +K ++
Sbjct: 89 VWDLEAAKILRTL-MGHKANICSLDFHPYGEFVASGSQDTNIKL-WDIR----RKGCVFR 142
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
+ H + V C+ FS D + LAS + D +K+W + +G+ + H+ V + F
Sbjct: 143 ----YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP-GHTGPVNVVEF 197
Query: 316 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 375
+ + S S D T R L+ +++ G V +F DG + + D +++V
Sbjct: 198 HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRV 256
Query: 376 WDLKSTDC 383
+ + C
Sbjct: 257 YGWEPERC 264
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 41/177 (23%), Positives = 75/177 (42%)
Query: 337 KSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRG 395
K+ L+E H+S V+ + R++ T DC V +W + +C+ + L G
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTG 61
Query: 396 GDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 454
+ V SV L P+ ++V S SI + L+ + G + + + P G
Sbjct: 62 HTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYG 117
Query: 455 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
E++ +D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 240 (89.5 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 62/185 (33%), Positives = 93/185 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G S E R + + +V+ S G I V WD + K+ + T M H + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRV-WDLEAAKILR--------TLMGHKANICSL 111
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 112 DFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHT 170
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
++ L +GK++ EF GH+ VN F + + + SSD T++ WDL+ + +
Sbjct: 171 VKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGE 230
Query: 391 P-PLR 394
P P+R
Sbjct: 231 PGPVR 235
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/210 (22%), Positives = 90/210 (42%)
Query: 305 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 363
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 364 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 423
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 130
Query: 424 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 481
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 482 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H V V HP+ LLA+ D T++ W
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 141 (54.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 258 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 316
+ + H V + + S +LA+G D ++ +W I C+ L H+ V S+ +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVRLN 72
Query: 317 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
I++ S + R+ L++ K+L+ GH + + F G V + S D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 377 DLKSTDCLQTFK 388
D++ C+ ++
Sbjct: 133 DIRRKGCVFRYR 144
Score = 140 (54.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 46/188 (24%), Positives = 85/188 (45%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
V D+ + T+ G K++ F P G+F+ S S D I++ WD +K ++
Sbjct: 89 VWDLEAAKILRTL-MGHKANICSLDFHPYGEFVASGSQDTNIKL-WDIR----RKGCVFR 142
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
+ H + V C+ FS D + LAS + D +K+W + +G+ + H+ V + F
Sbjct: 143 ----YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP-GHTGPVNVVEF 197
Query: 316 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 375
+ + S S D T R L+ +++ G V +F DG + + D +++V
Sbjct: 198 HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRV 256
Query: 376 WDLKSTDC 383
+ + C
Sbjct: 257 YGWEPERC 264
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 41/177 (23%), Positives = 75/177 (42%)
Query: 337 KSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRG 395
K+ L+E H+S V+ + R++ T DC V +W + +C+ + L G
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTG 61
Query: 396 GDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 454
+ V SV L P+ ++V S SI + L+ + G + + + P G
Sbjct: 62 HTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYG 117
Query: 455 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
E++ +D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 240 (89.5 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 62/185 (33%), Positives = 93/185 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G S E R + + +V+ S G I V WD + K+ + T M H + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRV-WDLEAAKILR--------TLMGHKANICSL 111
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 112 DFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHT 170
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
++ L +GK++ EF GH+ VN F + + + SSD T++ WDL+ + +
Sbjct: 171 VKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGE 230
Query: 391 P-PLR 394
P P+R
Sbjct: 231 PGPVR 235
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/210 (22%), Positives = 90/210 (42%)
Query: 305 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 363
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 364 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 423
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 130
Query: 424 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 481
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 482 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H V V HP+ LLA+ D T++ W
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 258 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 316
+ + H V + + S +LA+G D ++ +W I C+ L H+ V S+ +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVRLN 72
Query: 317 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
I++ S + R+ L++ K+L+ GH + + F G V + S D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 377 DLKSTDCLQTFK 388
D++ C+ ++
Sbjct: 133 DIRRKGCVFRYR 144
Score = 139 (54.0 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 46/188 (24%), Positives = 85/188 (45%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
V D+ + T+ G K++ F P G+F+ S S D I++ WD +K ++
Sbjct: 89 VWDLEAAKILRTL-MGHKANICSLDFHPYGEFVASGSQDTNIKL-WDIR----RKGCVFR 142
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
+ H + V C+ FS D + LAS + D +K+W + +G+ + H+ V + F
Sbjct: 143 ----YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP-GHTGPVNVVEF 197
Query: 316 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 375
+ + S S D T R L+ +++ G V +F DG + + D +++V
Sbjct: 198 HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRV 256
Query: 376 WDLKSTDC 383
+ + C
Sbjct: 257 YGWEPERC 264
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 41/177 (23%), Positives = 75/177 (42%)
Query: 337 KSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRG 395
K+ L+E H+S V+ + R++ T DC V +W + +C+ + L G
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTG 61
Query: 396 GDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 454
+ V SV L P+ ++V S SI + L+ + G + + + P G
Sbjct: 62 HTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYG 117
Query: 455 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
E++ +D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 226 (84.6 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+DG + + WD +G + F+ H + VL + FS D+ + S
Sbjct: 72 SSDGQFALSGSWDGTLRL-WDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVS 122
Query: 282 GSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 123 GSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI 235
Query: 399 SVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 432
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 -INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 277 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 332
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 393 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 451
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 509
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 510 LW 511
+W
Sbjct: 258 IW 259
Score = 160 (61.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 69/246 (28%), Positives = 108/246 (43%)
Query: 223 PDGQFLVSCSFDGFIEVVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLA 280
PD ++S S D I ++W KL +D Y + + H V + S D +
Sbjct: 28 PD--MILSASRDKTI-IMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSG 339
SGS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
K + HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHT 192
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVS 451
+N+V + P +C GQ + + GK +GGD + A C S
Sbjct: 193 GYLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFS 242
Query: 452 PKGEWI 457
P W+
Sbjct: 243 PNRYWL 248
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 44/179 (24%), Positives = 77/179 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
+SH+E C RFSP+ +VSC +D ++V W+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV-WNLANCKLKTN---HIGHTGYLNTVTV 200
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------G 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 -----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATG 253
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
I + + LK + + ++ DG + +D V+VW +
Sbjct: 254 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 226 (84.6 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+DG + + WD +G + F+ H + VL + FS D+ + S
Sbjct: 72 SSDGQFALSGSWDGTLRL-WDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVS 122
Query: 282 GSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 123 GSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI 235
Query: 399 SVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 432
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 -INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 277 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 332
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 393 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 451
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 509
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 510 LW 511
+W
Sbjct: 258 IW 259
Score = 160 (61.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 69/246 (28%), Positives = 108/246 (43%)
Query: 223 PDGQFLVSCSFDGFIEVVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLA 280
PD ++S S D I ++W KL +D Y + + H V + S D +
Sbjct: 28 PD--MILSASRDKTI-IMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSG 339
SGS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
K + HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHT 192
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVS 451
+N+V + P +C GQ + + GK +GGD + A C S
Sbjct: 193 GYLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFS 242
Query: 452 PKGEWI 457
P W+
Sbjct: 243 PNRYWL 248
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 44/179 (24%), Positives = 77/179 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
+SH+E C RFSP+ +VSC +D ++V W+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV-WNLANCKLKTN---HIGHTGYLNTVTV 200
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------G 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 -----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATG 253
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
I + + LK + + ++ DG + +D V+VW +
Sbjct: 254 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 226 (84.6 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+DG + + WD +G + F+ H + VL + FS D+ + S
Sbjct: 72 SSDGQFALSGSWDGTLRL-WDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVS 122
Query: 282 GSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 123 GSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI 235
Query: 399 SVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 432
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 -INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 277 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 332
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 393 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 451
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 509
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 510 LW 511
+W
Sbjct: 258 IW 259
Score = 160 (61.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 69/246 (28%), Positives = 108/246 (43%)
Query: 223 PDGQFLVSCSFDGFIEVVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLA 280
PD ++S S D I ++W KL +D Y + + H V + S D +
Sbjct: 28 PD--MILSASRDKTI-IMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSG 339
SGS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
K + HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHT 192
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVS 451
+N+V + P +C GQ + + GK +GGD + A C S
Sbjct: 193 GYLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFS 242
Query: 452 PKGEWI 457
P W+
Sbjct: 243 PNRYWL 248
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 44/179 (24%), Positives = 77/179 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
+SH+E C RFSP+ +VSC +D ++V W+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV-WNLANCKLKTN---HIGHTGYLNTVTV 200
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------G 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 -----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATG 253
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
I + + LK + + ++ DG + +D V+VW +
Sbjct: 254 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 226 (84.6 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+DG + + WD +G + F+ H + VL + FS D+ + S
Sbjct: 72 SSDGQFALSGSWDGTLRL-WDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVS 122
Query: 282 GSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 123 GSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI 235
Query: 399 SVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 432
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 -INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 277 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 332
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 393 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 451
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 509
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 510 LW 511
+W
Sbjct: 258 IW 259
Score = 160 (61.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 69/246 (28%), Positives = 108/246 (43%)
Query: 223 PDGQFLVSCSFDGFIEVVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLA 280
PD ++S S D I ++W KL +D Y + + H V + S D +
Sbjct: 28 PD--MILSASRDKTI-IMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSG 339
SGS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
K + HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHT 192
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVS 451
+N+V + P +C GQ + + GK +GGD + A C S
Sbjct: 193 GYLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFS 242
Query: 452 PKGEWI 457
P W+
Sbjct: 243 PNRYWL 248
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 44/179 (24%), Positives = 77/179 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
+SH+E C RFSP+ +VSC +D ++V W+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV-WNLANCKLKTN---HIGHTGYLNTVTV 200
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------G 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 -----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATG 253
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
I + + LK + + ++ DG + +D V+VW +
Sbjct: 254 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 226 (84.6 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+DG + + WD +G + F+ H + VL + FS D+ + S
Sbjct: 72 SSDGQFALSGSWDGTLRL-WDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVS 122
Query: 282 GSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 123 GSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI 235
Query: 399 SVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 432
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 -INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 277 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 332
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 393 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 451
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 509
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 510 LW 511
+W
Sbjct: 258 IW 259
Score = 160 (61.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 69/246 (28%), Positives = 108/246 (43%)
Query: 223 PDGQFLVSCSFDGFIEVVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLA 280
PD ++S S D I ++W KL +D Y + + H V + S D +
Sbjct: 28 PD--MILSASRDKTI-IMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSG 339
SGS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
K + HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHT 192
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVS 451
+N+V + P +C GQ + + GK +GGD + A C S
Sbjct: 193 GYLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFS 242
Query: 452 PKGEWI 457
P W+
Sbjct: 243 PNRYWL 248
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 44/179 (24%), Positives = 77/179 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
+SH+E C RFSP+ +VSC +D ++V W+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV-WNLANCKLKTN---HIGHTGYLNTVTV 200
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------G 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 -----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATG 253
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
I + + LK + + ++ DG + +D V+VW +
Sbjct: 254 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 226 (84.6 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+DG + + WD +G + F+ H + VL + FS D+ + S
Sbjct: 72 SSDGQFALSGSWDGTLRL-WDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVS 122
Query: 282 GSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 123 GSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI 235
Query: 399 SVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 432
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 -INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 277 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 332
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 393 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 451
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 509
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 510 LW 511
+W
Sbjct: 258 IW 259
Score = 160 (61.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 69/246 (28%), Positives = 108/246 (43%)
Query: 223 PDGQFLVSCSFDGFIEVVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLA 280
PD ++S S D I ++W KL +D Y + + H V + S D +
Sbjct: 28 PD--MILSASRDKTI-IMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSG 339
SGS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
K + HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHT 192
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVS 451
+N+V + P +C GQ + + GK +GGD + A C S
Sbjct: 193 GYLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFS 242
Query: 452 PKGEWI 457
P W+
Sbjct: 243 PNRYWL 248
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 44/179 (24%), Positives = 77/179 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
+SH+E C RFSP+ +VSC +D ++V W+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV-WNLANCKLKTN---HIGHTGYLNTVTV 200
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------G 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 -----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATG 253
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
I + + LK + + ++ DG + +D V+VW +
Sbjct: 254 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 226 (84.6 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+DG + + WD +G + F+ H + VL + FS D+ + S
Sbjct: 72 SSDGQFALSGSWDGTLRL-WDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVS 122
Query: 282 GSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 123 GSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI 235
Query: 399 SVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 432
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 -INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 277 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 332
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 393 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 451
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 509
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 510 LW 511
+W
Sbjct: 258 IW 259
Score = 160 (61.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 69/246 (28%), Positives = 108/246 (43%)
Query: 223 PDGQFLVSCSFDGFIEVVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLA 280
PD ++S S D I ++W KL +D Y + + H V + S D +
Sbjct: 28 PD--MILSASRDKTI-IMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSG 339
SGS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
K + HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHT 192
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVS 451
+N+V + P +C GQ + + GK +GGD + A C S
Sbjct: 193 GYLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFS 242
Query: 452 PKGEWI 457
P W+
Sbjct: 243 PNRYWL 248
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 44/179 (24%), Positives = 77/179 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
+SH+E C RFSP+ +VSC +D ++V W+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV-WNLANCKLKTN---HIGHTGYLNTVTV 200
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------G 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 -----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATG 253
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
I + + LK + + ++ DG + +D V+VW +
Sbjct: 254 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 226 (84.6 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+DG + + WD +G + F+ H + VL + FS D+ + S
Sbjct: 72 SSDGQFALSGSWDGTLRL-WDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVS 122
Query: 282 GSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 123 GSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI 235
Query: 399 SVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 432
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 -INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 277 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 332
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 393 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 451
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 509
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 510 LW 511
+W
Sbjct: 258 IW 259
Score = 160 (61.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 69/246 (28%), Positives = 108/246 (43%)
Query: 223 PDGQFLVSCSFDGFIEVVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLA 280
PD ++S S D I ++W KL +D Y + + H V + S D +
Sbjct: 28 PD--MILSASRDKTI-IMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSG 339
SGS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
K + HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHT 192
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVS 451
+N+V + P +C GQ + + GK +GGD + A C S
Sbjct: 193 GYLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFS 242
Query: 452 PKGEWI 457
P W+
Sbjct: 243 PNRYWL 248
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 44/179 (24%), Positives = 77/179 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
+SH+E C RFSP+ +VSC +D ++V W+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV-WNLANCKLKTN---HIGHTGYLNTVTV 200
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------G 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 -----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATG 253
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
I + + LK + + ++ DG + +D V+VW +
Sbjct: 254 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 226 (84.6 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+DG + + WD +G + F+ H + VL + FS D+ + S
Sbjct: 72 SSDGQFALSGSWDGTLRL-WDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVS 122
Query: 282 GSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 123 GSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI 235
Query: 399 SVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 432
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 -INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 277 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 332
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 393 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 451
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 509
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 510 LW 511
+W
Sbjct: 258 IW 259
Score = 160 (61.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 69/246 (28%), Positives = 108/246 (43%)
Query: 223 PDGQFLVSCSFDGFIEVVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLA 280
PD ++S S D I ++W KL +D Y + + H V + S D +
Sbjct: 28 PD--MILSASRDKTI-IMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSG 339
SGS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
K + HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHT 192
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVS 451
+N+V + P +C GQ + + GK +GGD + A C S
Sbjct: 193 GYLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFS 242
Query: 452 PKGEWI 457
P W+
Sbjct: 243 PNRYWL 248
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 44/179 (24%), Positives = 77/179 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
+SH+E C RFSP+ +VSC +D ++V W+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV-WNLANCKLKTN---HIGHTGYLNTVTV 200
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------G 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 -----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATG 253
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
I + + LK + + ++ DG + +D V+VW +
Sbjct: 254 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 226 (84.6 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+DG + + WD +G + F+ H + VL + FS D+ + S
Sbjct: 72 SSDGQFALSGSWDGTLRL-WDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVS 122
Query: 282 GSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 123 GSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI 235
Query: 399 SVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 432
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 -INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 277 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 332
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 393 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 451
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 509
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 510 LW 511
+W
Sbjct: 258 IW 259
Score = 160 (61.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 69/246 (28%), Positives = 108/246 (43%)
Query: 223 PDGQFLVSCSFDGFIEVVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLA 280
PD ++S S D I ++W KL +D Y + + H V + S D +
Sbjct: 28 PD--MILSASRDKTI-IMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSG 339
SGS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
K + HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHT 192
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVS 451
+N+V + P +C GQ + + GK +GGD + A C S
Sbjct: 193 GYLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFS 242
Query: 452 PKGEWI 457
P W+
Sbjct: 243 PNRYWL 248
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 44/179 (24%), Positives = 77/179 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
+SH+E C RFSP+ +VSC +D ++V W+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV-WNLANCKLKTN---HIGHTGYLNTVTV 200
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------G 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 -----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATG 253
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
I + + LK + + ++ DG + +D V+VW +
Sbjct: 254 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 222 (83.2 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 56/167 (33%), Positives = 90/167 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSPD Q L + S G + + + +GK +Y D + +L I +S D + LA
Sbjct: 114 FSPDSQHLATGSHVGKVNI-FGVETGKK----EYSLDT----RGKFILSIAYSPDGKYLA 164
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
SG+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHAS 223
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
L GH S+V + F+ D + V++SSD +VKVWD+ + C+ TF
Sbjct: 224 LAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTF 270
Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 43/157 (27%), Positives = 79/157 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
+SPDG++L S + DG I + +D +GKL L+ H + + FS DS++L
Sbjct: 156 YSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLV 206
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+ S DG IK++ ++ L H V ++ FS D + +S+S D + ++ + +
Sbjct: 207 TASDDGYIKIYEVQHASLAATLS-GHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSART 265
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ F H V + +GS++V+ + D + V+D
Sbjct: 266 CVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 159 (61.0 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 60/285 (21%), Positives = 120/285 (42%)
Query: 222 SPDG-QFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
S DG + ++S S D ++V W + +L +LQ T H V+ ++ S ++A
Sbjct: 28 SNDGSELVISGSLDDLVKV-WKWSDERL--ELQ----STLEGHQLGVVSVDVSPSGNIMA 80
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
S S D I++W + SG+ +R ++ A S+ FS D + + S I G+++GK
Sbjct: 81 SSSLDAHIRLWDLESGKQIRAID-AGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGK 139
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 400
++ ++ DG + + + D + ++D+ + L T L G +
Sbjct: 140 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPI 193
Query: 401 NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCV 460
S+ P + +V + I I +Q + + SG G + SP
Sbjct: 194 RSLTFSPDS-QLLVTASDDGYIKIYEVQHASLAATLSG--HGSWVLNVAFSPDDTHFVSS 250
Query: 461 GEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
D+++ + + H H+ V GV ++ + + + + +D
Sbjct: 251 SSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADD 295
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 55/222 (24%), Positives = 102/222 (45%)
Query: 299 LRRLERAHSEGVTSLVF---SRDGSQ-ILSTSFDSTARIHGLKSGKL-LKE-FRGHSSYV 352
L + E AH + + S+ + S DGS+ ++S S D ++ +L L+ GH V
Sbjct: 8 LFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGV 67
Query: 353 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 412
+ G+ + ++S D +++WDL+S ++ P DA SV P + H
Sbjct: 68 VSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPV----DAW--SVAFSPDS-QH 120
Query: 413 IVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACV-SPKGEWIYCVGEDRNLYCFS 470
+ + + I ++ G+ K +S R G F+ + SP G+++ D + F
Sbjct: 121 LATGSHVGKVNIFGVETGK--KEYSLDTR--GKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 471 HQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+GKL H ++ H + +T P LL T +D +K+++
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYE 218
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 226 (84.6 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+DG + + WD +G + F+ H + VL + FS D+ + S
Sbjct: 75 SSDGQFALSGSWDGTLRL-WDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVS 125
Query: 282 GSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 126 GSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 184
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 185 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI 238
Query: 399 SVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 432
+N++ F +P+ +C T SI I L+G+++
Sbjct: 239 -INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 269
Score = 191 (72.3 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 277 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 332
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 32 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 91
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 92 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 147
Query: 393 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 451
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 148 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 204
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 509
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 205 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 260
Query: 510 LW 511
+W
Sbjct: 261 IW 262
Score = 160 (61.4 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 69/246 (28%), Positives = 108/246 (43%)
Query: 223 PDGQFLVSCSFDGFIEVVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLA 280
PD ++S S D I ++W KL +D Y + + H V + S D +
Sbjct: 31 PD--MILSASRDKTI-IMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 82
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSG 339
SGS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L
Sbjct: 83 SGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 141
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
K + HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 142 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHT 195
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVS 451
+N+V + P +C GQ + + GK +GGD + A C S
Sbjct: 196 GYLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFS 245
Query: 452 PKGEWI 457
P W+
Sbjct: 246 PNRYWL 251
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 44/179 (24%), Positives = 77/179 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
+SH+E C RFSP+ +VSC +D ++V W+ + KLK + T ++ TV
Sbjct: 148 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV-WNLANCKLKTN---HIGHTGYLNTVTV 203
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------G 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 204 -----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATG 256
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
I + + LK + + ++ DG + +D V+VW +
Sbjct: 257 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 315
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 235 (87.8 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 84/303 (27%), Positives = 132/303 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G K +FSP G L S S D + + W + K K +++A H V +
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRL-W--IPDKRGKFSEFKA------HTAPVRSV 108
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+FS D + LA+ S+D IKVW + + L L R H+ V FS DG I+S S D T
Sbjct: 109 DFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
+I + + + F + N F G+ + +A SD TVKVWD++ LQ ++
Sbjct: 168 IKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVH 227
Query: 391 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM---------TLQGQVVKSFSSGKRE 441
GG VN + P + +++V + ++ I+ TLQG F+ +
Sbjct: 228 S---GG---VNCISFHPSD-NYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSK 280
Query: 442 GGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL---MKVHEKDVIGVTHHPHRNL 498
GG+ A+ + ++ D L+C L+ L H D+ T HPH
Sbjct: 281 GGELFASGGADTQVLLWRTNFDE-LHCKGLNKRNLKRLHFDSPPHLLDIYPRTPHPHEEK 339
Query: 499 LAT 501
+ T
Sbjct: 340 VET 342
Score = 221 (82.9 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 71/303 (23%), Positives = 129/303 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQ-YQADETFMMHDETVLC 269
G K+ SP+G+ L + S+D F+ ++W++ K + Y+ ++ H + V
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFL-MLWNF-----KPHARAYR----YVGHKDVVTS 65
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
++FS +LAS S+D +++W I + +AH+ V S+ FS DG + + S D
Sbjct: 66 VQFSPHGNLLASASRDRTVRLW-IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDK 124
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
+ ++ + + L H+ +V A F+ DG +V+ S D T+K+WD + C+ F
Sbjct: 125 SIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD 184
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 449
SV + NP + + S + +V K + G
Sbjct: 185 ---------SVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCIS 235
Query: 450 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 509
P ++ D L G+L + ++ H V V+ L A+ G D +
Sbjct: 236 FHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Query: 510 LWK 512
LW+
Sbjct: 296 LWR 298
Score = 201 (75.8 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 74/255 (29%), Positives = 113/255 (44%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F H + ++ S + + LA+ S D + +W + R H + VTS+ FS G
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-GHKDVVTSVQFSPHG 72
Query: 320 SQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
+ + S S D T R+ K GK EF+ H++ V F+ DG + TAS D ++KVW +
Sbjct: 73 NLLASASRDRTVRLWIPDKRGKF-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 379 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH--IVVCNKTSSIYIM-TLQGQVVKSF 435
Q F L + V +PD IV C++ +I I T Q V +F
Sbjct: 132 YR----QRF-----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 436 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 495
S +FV +P G I G D+ + + + KL +VH V ++ HP
Sbjct: 183 SDSVGFA-NFVD--FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS 239
Query: 496 RNLLATYGEDCTMKL 510
N L T D T+K+
Sbjct: 240 DNYLVTASSDGTLKI 254
Score = 129 (50.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 52/217 (23%), Positives = 88/217 (40%)
Query: 299 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
L R + H +TSL S +G Q+ + S+D+ + K + GH V F+
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 359 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 418
G+ + +AS D TV++W FK A V SV F + + ++
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFK------AHTAPVRSVD-FSADGQFLATASE 122
Query: 419 TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 478
SI + ++ Q + S R A SP G I ED+ + + + + +
Sbjct: 123 DKSIKVWSMYRQ--RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 479 LMKVHEKDVIG----VTHHPHRNLLATYGEDCTMKLW 511
+ D +G V +P +A+ G D T+K+W
Sbjct: 181 ----NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 213
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 229 (85.7 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 79/338 (23%), Positives = 146/338 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G K+D ++ P G +S F P +VS S D I+V WDY +G
Sbjct: 18 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV-WDYETGD 76
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 77 FERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHD 127
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + +
Sbjct: 128 HNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 187
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSI 422
S+D TV+VW + + +C + + ++S +S+ K
Sbjct: 188 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPF 245
Query: 423 YIMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSG 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 305
Query: 475 KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ + HE V + H + T D T+K+W+
Sbjct: 306 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 176 (67.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 57/205 (27%), Positives = 88/205 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLSG 246
+A + M+ + +K T H E R + DG + SCS D + V W +
Sbjct: 144 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRV-WVVATK 201
Query: 247 KLKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIR 294
+ K +L ++ + + + I + SE L SGS+D IK+W +
Sbjct: 202 ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 261
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
+G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 262 TGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 320
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLK 379
F VVT S D TVKVW+ +
Sbjct: 321 LDFHKTAPYVVTGSVDQTVKVWECR 345
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 224 (83.9 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 67/215 (31%), Positives = 108/215 (50%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+DG + + WD +G + F+ H + VL + FS D+ + S
Sbjct: 72 SSDGQFALSGSWDGTLRL-WDLTTGTTTR--------RFVGHTKDVLSVAFSADNRQIVS 122
Query: 282 GSQDGKIKVWRIRSGQCLRRLER-AHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W G C ++ +H+E V+ + FS + S I+S +D ++ L +
Sbjct: 123 GSRDKTIKLWNTL-GVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLAN 181
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGD- 234
Query: 399 SVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 432
++N++ F +P+ +C T SI I L+G+++
Sbjct: 235 TINAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 186 (70.5 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 66/242 (27%), Positives = 105/242 (43%)
Query: 277 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 332
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
+ L +G + F GH+ V F+ D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGV-CKYTIQDDSH 147
Query: 393 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 451
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 148 TEW----VSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 509
P G G+D + GK HL + D I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDTINALCFSPNRYWLCAATGP--SIK 257
Query: 510 LW 511
+W
Sbjct: 258 IW 259
Score = 152 (58.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 68/246 (27%), Positives = 108/246 (43%)
Query: 223 PDGQFLVSCSFDGFIEVVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLA 280
PD ++S S D I ++W KL +D Y + + H V + S D +
Sbjct: 28 PD--MILSASRDKTI-IMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 79
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSG 339
SGS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVC 138
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
K + H+ +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 139 KYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNL--ANC----KLKTNHIGHT 192
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVS 451
+N+V + P +C GQ + + GK +GGD + A C S
Sbjct: 193 GYLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDTINALCFS 242
Query: 452 PKGEWI 457
P W+
Sbjct: 243 PNRYWL 248
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 224 (83.9 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 68/215 (31%), Positives = 106/215 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+DG + + WD +G + F+ H + VL + FS D+ + S
Sbjct: 72 SSDGQFALSGSWDGTLRL-WDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVS 122
Query: 282 GSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W G C ++ +HSE V+ + FS + S I+S +D + L +
Sbjct: 123 GSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLAN 181
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI 235
Query: 399 SVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 432
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 -INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 177 (67.4 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 68/261 (26%), Positives = 112/261 (42%)
Query: 259 TFMMHDETVLCIEFSRDSEML-ASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSL 313
T H+ V + +++ L S +D I +W++ + +R R HS V+ +
Sbjct: 10 TLKGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 314 VFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTV 373
V S DG LS S+D T R+ L +G + F GH+ V F++D ++V+ S D T+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 374 KVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVV 432
K+W+ C T + V+ V P + + I+V C + + L +
Sbjct: 130 KLWNTLGV-CKYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCKL 184
Query: 433 KSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VT 491
K+ G G VSP G G+D + GK HL + D+I +
Sbjct: 185 KTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALC 240
Query: 492 HHPHRN-LLATYGEDCTMKLW 511
P+R L A G ++K+W
Sbjct: 241 FSPNRYWLCAATGP--SIKIW 259
Score = 117 (46.2 bits), Expect = 0.00048, P = 0.00048
Identities = 44/179 (24%), Positives = 76/179 (42%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
+SH+E C RFSP+ +VSC +D + V W+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNV-WNLANCKLKTN---HIGHTGYLNTVTV 200
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------G 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 -----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATG 253
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
I + + LK + + ++ DG + +D V+VW +
Sbjct: 254 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 220 (82.5 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 54/167 (32%), Positives = 89/167 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSPD +++ + S G + + + SGK + L + + +L I +S D + LA
Sbjct: 114 FSPDSKYIATGSHLGKVNI-FGVESGKKEHSLDTRG--------KFILSIAYSPDGKYLA 164
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
SG+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
L GH S+V F+ D + V++SSD ++KVWD S C+ TF
Sbjct: 224 LAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTF 270
Score = 198 (74.8 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 65/249 (26%), Positives = 112/249 (44%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S +G S S D I + WD +GK K + + + + FS DS+ +A+
Sbjct: 73 SQNGAIAASSSLDAHIRL-WDLETGKQIKSMDAGPVDAWT--------VAFSPDSKYIAT 123
Query: 282 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 341
GS GK+ ++ + SG+ L+ + + S+ +S DG + S + D I + +GKL
Sbjct: 124 GSHLGKVNIFGVESGKKEHSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 342 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVN 401
L GH+ + F+ D +VTAS D +K++D++ + T L G + V
Sbjct: 183 LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHGSWVL 236
Query: 402 SVHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCV 460
SV P + H V + SI + T V +F + + + +P G I
Sbjct: 237 SVAFSPDDT-HFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQ---VWSVKYNPTGSKIVSA 292
Query: 461 GEDRNLYCF 469
G+DR ++ +
Sbjct: 293 GDDRAIHIY 301
Score = 183 (69.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 45/157 (28%), Positives = 77/157 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
+SPDG++L S + DG I + +D +GKL L+ H + + FS DS++L
Sbjct: 156 YSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLV 206
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+ S DG IK++ ++ L H V S+ FS D + +S+S D + ++ S
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLS-GHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRS 265
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ F H V + GS++V+A D + ++D
Sbjct: 266 CVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 129 (50.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 51/220 (23%), Positives = 94/220 (42%)
Query: 299 LRRLERAHSEGVTSLVFSR---DGSQILST-SFDSTARIHGLKSGKLLKEF--RGHSSYV 352
L + E AH + + + + R DGS+ + T S D ++ KL ++ GH V
Sbjct: 8 LFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGV 67
Query: 353 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 412
+ +G+ ++S D +++WDL +T K + G +V P + +
Sbjct: 68 VSVNISQNGAIAASSSLDAHIRLWDL------ETGKQIKSMDAGPVDAWTVAFSPDSK-Y 120
Query: 413 IVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV-SPKGEWIYCVGEDRNLYCFSH 471
I + + I ++ K S R G F+ + SP G+++ D + F
Sbjct: 121 IATGSHLGKVNIFGVESGK-KEHSLDTR--GKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 472 QSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+GKL H ++ H + +T P LL T +D +K++
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 220 (82.5 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 56/167 (33%), Positives = 90/167 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSPD Q L + + G + + + SGK +Y D + +L I +S D + LA
Sbjct: 114 FSPDSQHLATGTHMGKVNI-FGVESGKK----EYSLDT----RGKFILSIAYSPDGKYLA 164
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
SG+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
L GH+S+V + F D + V++SSD +VKVWD+ + C+ TF
Sbjct: 224 LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTF 270
Score = 172 (65.6 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 42/157 (26%), Positives = 78/157 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
+SPDG++L S + DG I + +D +GKL L+ H + + FS DS++L
Sbjct: 156 YSPDGKYLASGAIDGIINI-FDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLV 206
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+ S DG IK++ ++ L H+ V ++ F D + +S+S D + ++ + +
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 265
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ F H V + +GS++V+ D + V+D
Sbjct: 266 CIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 172 (65.6 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 58/241 (24%), Positives = 109/241 (45%)
Query: 230 SCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIK 289
S S D I + WD +GK K + + + + FS DS+ LA+G+ GK+
Sbjct: 81 SSSLDAHIRL-WDLENGKQMKSIDAGPVDAWTL--------AFSPDSQHLATGTHMGKVN 131
Query: 290 VWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHS 349
++ + SG+ L+ + + S+ +S DG + S + D I + +GKLL GH+
Sbjct: 132 IFGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 350 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN 409
+ F+ D +VTAS D +K++D++ + T L G + V +V P +
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHASWVLNVAFCPDD 244
Query: 410 PDHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYC 468
H V + S+ + + + + +F + + + G I VG+D+ ++
Sbjct: 245 T-HFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQ---VWGVKYNGNGSKIVSVGDDQEIHV 300
Query: 469 F 469
+
Sbjct: 301 Y 301
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 56/278 (20%), Positives = 116/278 (41%)
Query: 228 LVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGK 287
+V+ S D ++V W + +L +LQ+ + H V+ ++ S + AS S D
Sbjct: 35 VVTGSLDDLVKV-WKWRDERL--ELQWSLEG----HQLGVVSVDISHTLPIAASSSLDAH 87
Query: 288 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG 347
I++W + +G+ ++ ++ + T L FS D + + + I G++SGK
Sbjct: 88 IRLWDLENGKQMKSIDAGPVDAWT-LAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDT 146
Query: 348 HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFP 407
++ ++ DG + + + D + ++D+ + L T L G + S+ P
Sbjct: 147 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIRSLTFSP 200
Query: 408 KNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLY 467
+ +V + I I +Q + SG VA C P D+++
Sbjct: 201 DS-QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC--PDDTHFVSSSSDKSVK 257
Query: 468 CFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
+ + H H+ V GV ++ + + + + G+D
Sbjct: 258 VWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDD 295
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 233 (87.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 84/302 (27%), Positives = 131/302 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G K +FSP G L S S D I + W + K K +++A H V +
Sbjct: 58 GHKDVITSVQFSPLGNLLASASRDRTIRL-W--IPDKRGKSSEFKA------HTAPVRSV 108
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+FS D + LAS S+D IKVW + + L L R H+ V FS DG I+S S D T
Sbjct: 109 DFSADGQFLASASEDKSIKVWNMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
+I + + + F + N F +G+ + +A SD TVK+WD++ LQ ++
Sbjct: 168 IKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVH 227
Query: 391 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM---------TLQGQVVKSFSSGKRE 441
GG VN V P ++++ + ++ I+ TLQG F+ +
Sbjct: 228 S---GG---VNCVSFHPSG-NYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSK 280
Query: 442 GGDFVAACVSPKGEWIYCVGEDR-NLYCFSHQSGKLEHL-MKVHEKDVIGVTHHPHRNLL 499
GG+ + + ++ D N S ++ K H H D+ T HPH +
Sbjct: 281 GGELFTSGGADAQVLLWRTNFDELNYKDVSKRNLKRLHFDSPPHLLDIYPRTPHPHEGRI 340
Query: 500 AT 501
T
Sbjct: 341 DT 342
Score = 224 (83.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 73/303 (24%), Positives = 128/303 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADE-TFMMHDETVLC 269
G K+ FSP+G+ L + S+D F+ ++W L+ QA ++ H + +
Sbjct: 16 GHKAAITSVDFSPNGKQLATGSWDTFL-MLWS---------LRPQARAFRYVGHKDVITS 65
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
++FS +LAS S+D I++W I + +AH+ V S+ FS DG + S S D
Sbjct: 66 VQFSPLGNLLASASRDRTIRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDK 124
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
+ ++ + + L H+ +V A F+ DG +V+ S D T+K+WD + C+ F
Sbjct: 125 SIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD 184
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 449
V + NP+ + + S + +V K + G
Sbjct: 185 ---------FVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVS 235
Query: 450 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 509
P G ++ D L G+L + ++ H V V+ L + G D +
Sbjct: 236 FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVL 295
Query: 510 LWK 512
LW+
Sbjct: 296 LWR 298
Score = 212 (79.7 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 77/256 (30%), Positives = 119/256 (46%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR-SGQCLRRLERAHSEGVTSLVFSRD 318
F H + ++FS + + LA+GS D + +W +R + R + H + +TS+ FS
Sbjct: 14 FKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYV--GHKDVITSVQFSPL 71
Query: 319 GSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
G+ + S S D T R+ K GK EF+ H++ V F+ DG + +AS D ++KVW+
Sbjct: 72 GNLLASASRDRTIRLWIPDKRGKS-SEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWN 130
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH--IVVCNKTSSIYIM-TLQGQVVKS 434
+ Q F L + V +PD IV C++ +I I T Q V +
Sbjct: 131 MYR----QRF-----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 435 FSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP 494
FS +FVA +P G I G D + + + KL +VH V V+ HP
Sbjct: 182 FSDFVGFA-NFVA--FNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHP 238
Query: 495 HRNLLATYGEDCTMKL 510
N L T D T+K+
Sbjct: 239 SGNYLITASSDGTLKI 254
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 51/218 (23%), Positives = 90/218 (41%)
Query: 299 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
L R + H +TS+ FS +G Q+ + S+D+ + L+ + GH + F+
Sbjct: 10 LERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFS 69
Query: 359 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKP-PPPLRGGDASVNSVHLFPKNPDHIVVCN 417
G+ + +AS D T+++W FK P+R D S + L + D
Sbjct: 70 PLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASED------ 123
Query: 418 KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 477
SI + + Q + S R A SP G I ED+ + + + +
Sbjct: 124 --KSIKVWNMYRQ--RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCV 179
Query: 478 HLMKVHEKDVIG----VTHHPHRNLLATYGEDCTMKLW 511
+ + D +G V +P+ +A+ G D T+K+W
Sbjct: 180 N----NFSDFVGFANFVAFNPNGTCIASAGSDHTVKIW 213
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 230 (86.0 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 78/258 (30%), Positives = 119/258 (46%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F H + V C++FS +++ LASGS D + +W ++ R H + VT + FS G
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFT-GHKDAVTCVNFSPSG 73
Query: 320 SQILSTSFDSTARIH--GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ S S D T RI +K + FR H++ V F +DG +VTAS D TVKVW
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSLVTASDDKTVKVW- 130
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPD-HIVVC---NKTSSIYIMTLQGQVVK 433
ST Q F L +N V +PD ++V +KT ++ T + + +
Sbjct: 131 --STH-RQRF-----LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR-ECIH 181
Query: 434 SFSSGKREGGDFVAAC-VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 492
S+ E G FV P G I G D + + ++ +L ++H V ++
Sbjct: 182 SYC----EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSF 237
Query: 493 HPHRNLLATYGEDCTMKL 510
HP N L T D T+K+
Sbjct: 238 HPSGNYLITASSDSTLKI 255
Score = 227 (85.0 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 74/302 (24%), Positives = 127/302 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + C FS + + L S S D + ++W +K Q +A F H + V C+
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTL-MIWH-----MKP--QSRAYR-FTGHKDAVTCV 67
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
FS +LASGS+D +++W + + + + RAH+ V S+ F DG +++ S D T
Sbjct: 68 NFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
++ + L H ++V A F+ DG +V+AS D TVK+WD S +C+ ++
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCE- 185
Query: 391 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV 450
GG V V P I +++ + + + + A
Sbjct: 186 ---HGG--FVTYVDFHPSGTC-IAAAGMDNTVKVW--DARTHRLLQHYQLHSAAVNALSF 237
Query: 451 SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKL 510
P G ++ D L G+L + + H+ V A+ G D + +
Sbjct: 238 HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 511 WK 512
WK
Sbjct: 298 WK 299
Score = 153 (58.9 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 56/214 (26%), Positives = 88/214 (41%)
Query: 299 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
L R + H + VT + FS + + S S DST I +K F GH V F+
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 359 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 418
G + + S D TV++W + + T R A+V SVH F + +V +
Sbjct: 71 PSGHLLASGSRDKTVRIW-VPNVKGESTV-----FRAHTATVRSVH-FCSDGQSLVTASD 123
Query: 419 TSSIYIMTLQGQVVKSFSSGKREGGDFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 477
++ + + Q F + ++V A SP G I +D+ + + S +
Sbjct: 124 DKTVKVWSTHRQ---RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECI 180
Query: 478 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H H V V HP +A G D T+K+W
Sbjct: 181 HSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 231 (86.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 83/300 (27%), Positives = 128/300 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G K +FSP G L S S D + + W + K K +++A H V +
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRL-W--IPDKRGKFSEFKA------HTAPVRSV 66
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+FS D + LA+ S+D IKVW + + L L R H+ V FS DG I+S S D T
Sbjct: 67 DFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKT 125
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
+I + + + F + N F G+ + +A SD TVKVWD++ LQ ++
Sbjct: 126 IKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ-- 183
Query: 391 PPLRGGDASVNSVH-----LFPKNPDHIV-VCNKTSSIYIMTLQGQVVKSFSSGKREGGD 444
+ G + S H L + D + + + I TLQG F+ +GG+
Sbjct: 184 --VHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGE 241
Query: 445 FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL---MKVHEKDVIGVTHHPHRNLLAT 501
A+ + ++ D L+C L+ L H D+ T HPH + T
Sbjct: 242 LFASGGADTQVLLWRTNFDE-LHCKGLTKRNLKRLHFDSPPHLLDIYPRTPHPHEEKVET 300
Score = 210 (79.0 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 60/253 (23%), Positives = 106/253 (41%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
++ H + V ++FS +LAS S+D +++W I + +AH+ V S+ FS DG
Sbjct: 14 YVGHKDVVTSVQFSPHGNLLASASRDRTVRLW-IPDKRGKFSEFKAHTAPVRSVDFSADG 72
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
+ + S D + ++ + + L H+ +V A F+ DG +V+ S D T+K+WD
Sbjct: 73 QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 132
Query: 380 STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGK 439
+ C+ F SV + NP + + S + +V K +
Sbjct: 133 NKQCVNNFSD---------SVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ 183
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 499
G P G ++ D L G+L + ++ H V V+ L
Sbjct: 184 VHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELF 243
Query: 500 ATYGEDCTMKLWK 512
A+ G D + LW+
Sbjct: 244 ASGGADTQVLLWR 256
Score = 207 (77.9 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 60/175 (34%), Positives = 88/175 (50%)
Query: 209 KFGT-KSHAECAR---FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHD 264
KF K+H R FS DGQFL + S D I+V W + L Y+ H
Sbjct: 52 KFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV-WSMYRQRFLYSL-YR-------HT 102
Query: 265 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV-FSRDGSQIL 323
V C +FS D ++ S S+D IK+W + QC+ + S G + V F+ G+ I
Sbjct: 103 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF--SDSVGFANFVDFNPSGTCIA 160
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
S D T ++ ++ KLL+ ++ HS VN F G+ ++TASSD T+K+ DL
Sbjct: 161 SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDL 215
Score = 200 (75.5 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 58/229 (25%), Positives = 105/229 (45%)
Query: 186 FRGTAAMKQDVE--DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDY 243
F TA+ + ++ MY +++ T CA+FSPDG+ +VSCS D I++ WD
Sbjct: 74 FLATASEDKSIKVWSMYRQRFLYSLYRHTH-WVRCAKFSPDGRLIVSCSEDKTIKI-WDT 131
Query: 244 LSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE 303
+ K+ + +D + ++F+ +AS D +KVW +R + L+ +
Sbjct: 132 TN---KQCVNNFSDSVGFAN-----FVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ 183
Query: 304 RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 363
HS GV + F G+ +++ S D T +I L G+L+ +GH+ V F+ G
Sbjct: 184 -VHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGEL 242
Query: 364 VVTASSDCTVKVW--DLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 410
+ +D V +W + C K D+ + + ++P+ P
Sbjct: 243 FASGGADTQVLLWRTNFDELHCKGLTKRNLKRLHFDSPPHLLDIYPRTP 291
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 234 (87.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 85/305 (27%), Positives = 137/305 (44%)
Query: 218 CARFSPDGQFLVS-CSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDS 276
C FS DG++L + C+ I +D +GK + DE+ D + + FS D
Sbjct: 286 CVNFSNDGKYLATGCNRSAQI---YDVDTGK---KVHAFVDESEKDGDLYIRSVCFSPDG 339
Query: 277 EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL 336
LA+G++D +KVW I + + ++ H + SL +S DG I+S S D A+I +
Sbjct: 340 NYLATGAEDKTVKVWDIHTKK-IQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI 398
Query: 337 KSGK----LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
+ GK L E G + V + DG V S D V++WD ++ L+ ++
Sbjct: 399 EKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYE---- 454
Query: 393 LRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGG-DFV-AACV 450
G SV SV P + + S+ + L G +S G DFV +
Sbjct: 455 --GHLDSVYSVAFSPDGKS-LASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAF 511
Query: 451 SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN---LLATYGEDCT 507
SP G W+ +DR++ + ++G +++ H+ VI V P N + AT D
Sbjct: 512 SPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFR 571
Query: 508 MKLWK 512
+LWK
Sbjct: 572 SRLWK 576
Score = 176 (67.0 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 58/263 (22%), Positives = 116/263 (44%)
Query: 261 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRR-LERAHSEG---VTSLVFS 316
+ H+ V C+ FS D + LA+G + +++ + +G+ + ++ + +G + S+ FS
Sbjct: 278 LQHNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFS 336
Query: 317 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
DG+ + + + D T ++ + + K+ F GH + +++DG +V+ S D K+W
Sbjct: 337 PDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIW 396
Query: 377 DLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFS 436
D++ C T G V SV + P +V +I + Q +
Sbjct: 397 DIEKGKCAFTLGNEEV--GPKNGVTSVAMSPDG--RLVAAGSLDNI-VRLWDAQT--GYF 449
Query: 437 SGKREGG-DFV-AACVSPKGEWIYCVGEDRNLYCF----SHQSGKLEHLMKVHEKDVIGV 490
+ EG D V + SP G+ + D++L + S + H+ V+ V
Sbjct: 450 LERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSV 509
Query: 491 THHPHRNLLATYGEDCTMKLWKP 513
P + L + +D +++ W P
Sbjct: 510 AFSPDGSWLISGSKDRSVQFWDP 532
Score = 170 (64.9 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 55/202 (27%), Positives = 94/202 (46%)
Query: 188 GTAAMKQDVEDMYPTTLSHTI---KFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYL 244
G+ K + D+ + T+ + G K+ SPDG+ + + S D + + WD
Sbjct: 387 GSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRL-WDAQ 445
Query: 245 SGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRI---RSGQCLRR 301
+G + +Y+ H ++V + FS D + LASGS D +K+W + RS R
Sbjct: 446 TGYFLE--RYEG------HLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRA 497
Query: 302 LERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH-SSYVNDAIFTND 360
H + V S+ FS DGS ++S S D + + ++G +GH +S ++ A+ +
Sbjct: 498 TFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKN 557
Query: 361 GSRVV--TASSDCTVKVWDLKS 380
S V T S D ++W S
Sbjct: 558 NSHGVFATGSGDFRSRLWKYDS 579
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 223 (83.6 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 74/279 (26%), Positives = 123/279 (44%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G K C +FSP G + S S D + +W +K + F H TV +
Sbjct: 60 GHKDAVMCVQFSPSGHLVASGSRDKTV-CLW---VPSVKGE-----STVFKAHTATVRSV 110
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
FS D + L + S D IKVW + + L L + H V FS DG I S S D T
Sbjct: 111 HFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQ-HINWVRCARFSPDGRLIASASDDKT 169
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
++ S + + F H + N F G+ + A +D TVKVWD++ LQ ++
Sbjct: 170 VKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVH 229
Query: 391 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKREGGDFVAAC 449
A+VNS+ P ++++ + S++ I+ L +G+++ + G A C
Sbjct: 230 T------AAVNSLSFHPSG-NYLITASNDSTLKILDLLEGRLLYTL-----HGHQGPATC 277
Query: 450 V--SPKGEWIYCVGEDRNLYCF--SHQSGKLEHLMKVHE 484
V S G++ G D + + + + + ++K H+
Sbjct: 278 VAFSRTGDFFASGGSDEQVMVWKTNFSAADYDGVLKTHK 316
Score = 218 (81.8 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 63/251 (25%), Positives = 113/251 (45%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H + V+C++FS ++ASGS+D + +W + S + + +AH+ V S+ FS DG +
Sbjct: 61 HKDAVMCVQFSPSGHLVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSL 119
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
++ S D T ++ + K L H ++V A F+ DG + +AS D TVK+WD S +
Sbjct: 120 VTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRE 179
Query: 383 CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKRE 441
C+ +F GG A N V P +KT ++ + + ++++ +
Sbjct: 180 CIHSFCE----HGGFA--NHVEFHPSGTCIAAAGTDKTVKVWDVRMN-RLLQHYQVHTAA 232
Query: 442 GGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLAT 501
P G ++ D L G+L + + H+ V + A+
Sbjct: 233 VNSL---SFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFAS 289
Query: 502 YGEDCTMKLWK 512
G D + +WK
Sbjct: 290 GGSDEQVMVWK 300
Score = 202 (76.2 bits), Expect = 9.1e-14, P = 9.1e-14
Identities = 69/257 (26%), Positives = 113/257 (43%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F H + + ++FS + + LASGS D +K+W ++ Q H + V + FS G
Sbjct: 16 FRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKP-QMRAYCLVGHKDAVMCVQFSPSG 74
Query: 320 SQILSTSFDSTAR--IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ S S D T + +K + F+ H++ V F++DG +VTAS D T+KVW
Sbjct: 75 HLVASGSRDKTVCLWVPSVKGESTV--FKAHTATVRSVHFSSDGQSLVTASDDKTIKVWT 132
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN----KTSSIYIMTLQGQVVK 433
+ Q F L +N V +PD ++ + KT ++ T + + +
Sbjct: 133 VHR----QKF-----LFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSR-ECIH 182
Query: 434 SFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHH 493
SF GG P G I G D+ + + + +L +VH V ++ H
Sbjct: 183 SFCE---HGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFH 239
Query: 494 PHRNLLATYGEDCTMKL 510
P N L T D T+K+
Sbjct: 240 PSGNYLITASNDSTLKI 256
Score = 151 (58.2 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 58/214 (27%), Positives = 88/214 (41%)
Query: 299 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
L R R H + +TS+ FS + Q+ S S DS +I +K GH V F+
Sbjct: 12 LERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFS 71
Query: 359 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 418
G V + S D TV +W + S T + A+V SVH F + +V +
Sbjct: 72 PSGHLVASGSRDKTVCLW-VPSVKGESTV-----FKAHTATVRSVH-FSSDGQSLVTASD 124
Query: 419 TSSIYIMTLQGQVVKSFSSGKREGGDFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 477
+I + T+ Q F + ++V A SP G I +D+ + + S +
Sbjct: 125 DKTIKVWTVHRQ---KFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECI 181
Query: 478 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H H V HP +A G D T+K+W
Sbjct: 182 HSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVW 215
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 232 (86.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 83/303 (27%), Positives = 131/303 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G K +FSP G L S S D + + W + K K +++A H V +
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRL-W--IPDKRGKFSEFKA------HTAPVRSV 108
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+FS D + LA+ S+D IKVW + + L L R H+ V FS DG I+S S D T
Sbjct: 109 DFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
+I + + + F + N F G+ + +A SD TVKVWD++ LQ ++
Sbjct: 168 IKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVH 227
Query: 391 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM---------TLQGQVVKSFSSGKRE 441
GG VN + P ++++ + ++ I+ TLQG F+ +
Sbjct: 228 S---GG---VNCISFHPSG-NYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSK 280
Query: 442 GGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL---MKVHEKDVIGVTHHPHRNL 498
GG+ A+ + ++ D L+C L+ L H D+ T HPH
Sbjct: 281 GGELFASGGADTQVLLWRTNFDE-LHCKGLTKRNLKRLHFDSPPHLLDIYPRTPHPHEEK 339
Query: 499 LAT 501
+ T
Sbjct: 340 VET 342
Score = 228 (85.3 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 72/303 (23%), Positives = 130/303 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQ-YQADETFMMHDETVLC 269
G K+ SP+G+ L + S+D F+ ++W++ K + Y+ ++ H + V
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFL-MLWNF-----KPHARAYR----YVGHKDVVTS 65
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
++FS +LAS S+D +++W I + +AH+ V S+ FS DG + + S D
Sbjct: 66 VQFSPHGNLLASASRDRTVRLW-IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDK 124
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
+ ++ + + L H+ +V A F+ DG +V+ S D T+K+WD + C+ F
Sbjct: 125 SIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD 184
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 449
SV + NP + + S + +V K + G
Sbjct: 185 ---------SVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCIS 235
Query: 450 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 509
P G ++ D L G+L + ++ H V V+ L A+ G D +
Sbjct: 236 FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Query: 510 LWK 512
LW+
Sbjct: 296 LWR 298
Score = 200 (75.5 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 74/255 (29%), Positives = 113/255 (44%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F H + ++ S + + LA+ S D + +W + R H + VTS+ FS G
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-GHKDVVTSVQFSPHG 72
Query: 320 SQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
+ + S S D T R+ K GK EF+ H++ V F+ DG + TAS D ++KVW +
Sbjct: 73 NLLASASRDRTVRLWIPDKRGKF-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 379 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH--IVVCNKTSSIYIM-TLQGQVVKSF 435
Q F L + V +PD IV C++ +I I T Q V +F
Sbjct: 132 YR----QRF-----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 436 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 495
S +FV +P G I G D+ + + + KL +VH V ++ HP
Sbjct: 183 SDSVGFA-NFVD--FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS 239
Query: 496 RNLLATYGEDCTMKL 510
N L T D T+K+
Sbjct: 240 GNYLITASSDGTLKI 254
Score = 129 (50.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 52/217 (23%), Positives = 88/217 (40%)
Query: 299 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
L R + H +TSL S +G Q+ + S+D+ + K + GH V F+
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 359 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 418
G+ + +AS D TV++W FK A V SV F + + ++
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFK------AHTAPVRSVD-FSADGQFLATASE 122
Query: 419 TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 478
SI + ++ Q + S R A SP G I ED+ + + + + +
Sbjct: 123 DKSIKVWSMYRQ--RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 479 LMKVHEKDVIG----VTHHPHRNLLATYGEDCTMKLW 511
+ D +G V +P +A+ G D T+K+W
Sbjct: 181 ----NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 213
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 230 (86.0 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 62/255 (24%), Positives = 119/255 (46%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
TF H ++C+ F+ S ++A+GS D K+W I+SG+ + L H + SL F
Sbjct: 172 TFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLT-GHLAEIISLSFDTS 230
Query: 319 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
G +I++ SFD T + +G+ + GH + ++ A+F+ D S ++T S D T +WD
Sbjct: 231 GDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDA 290
Query: 379 KSTDCLQTFKPPPPLRGGDASV-NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 437
S C+ T L G D + +S + + T+ +Y T + + K
Sbjct: 291 TSGKCVAT------LTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKL--E 342
Query: 438 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 497
G G+ +P+G + D+ + Q+G+ +++ H ++ + N
Sbjct: 343 GHE--GEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGN 400
Query: 498 LLATYGEDCTMKLWK 512
++ T +D + ++W+
Sbjct: 401 IVITGSKDNSCRIWR 415
Score = 211 (79.3 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 48/168 (28%), Positives = 81/168 (48%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
F G +++ SFD + VVWD +G+ T + H + FS D ++
Sbjct: 227 FDTSGDRIITGSFDHTV-VVWDASTGRKV--------HTLIGHCAEISSALFSWDCSLIL 277
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+GS D +W SG+C+ L H + + F G I + S D TAR++ + K
Sbjct: 278 TGSMDKTCMLWDATSGKCVATLT-GHDDEILDSCFDYTGKLIATASADGTARVYNATTRK 336
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
+ + GH ++ F G+R++T SSD T ++WD+++ CLQ +
Sbjct: 337 CITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLE 384
Score = 204 (76.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 63/252 (25%), Positives = 114/252 (45%)
Query: 263 HDETVLCIEFSRD-SEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 321
H V I F+ + +A+GS D K+W +G+C R H+ + L F+ +
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTF-RGHTAEIVCLSFNPQSTV 191
Query: 322 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 381
+ + S D+TA++ ++SG+ + GH + + F G R++T S D TV VWD +
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTG 251
Query: 382 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV--CNKTSSIYIMTLQGQVVKSFSSGK 439
+ T L G A ++S LF + I+ +KT ++ T G+ V + +
Sbjct: 252 RKVHT------LIGHCAEISSA-LFSWDCSLILTGSMDKTCMLWDAT-SGKCVATLTGHD 303
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 499
E + +C G+ I D ++ + K ++ HE ++ ++ +P N L
Sbjct: 304 DE---ILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRL 360
Query: 500 ATYGEDCTMKLW 511
T D T ++W
Sbjct: 361 LTGSSDKTARIW 372
Score = 191 (72.3 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 48/171 (28%), Positives = 87/171 (50%)
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDE 265
HT+ G + A FS D +++ S D ++WD SGK T HD+
Sbjct: 255 HTL-IGHCAEISSALFSWDCSLILTGSMDKTC-MLWDATSGKCVA--------TLTGHDD 304
Query: 266 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST 325
+L F +++A+ S DG +V+ + +C+ +LE H ++ + F+ G+++L+
Sbjct: 305 EILDSCFDYTGKLIATASADGTARVYNATTRKCITKLE-GHEGEISKISFNPQGNRLLTG 363
Query: 326 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
S D TARI +++G+ L+ GH+ + F G+ V+T S D + ++W
Sbjct: 364 SSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 177 (67.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 76/340 (22%), Positives = 142/340 (41%)
Query: 178 PPGTQFDLFRGTAAMKQDVE--DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDG 235
PPG + +G + ++ ++ P+T +T+ E + P L++ S
Sbjct: 12 PPGIMLEYEKGGELKTKSIDLLELSPSTDVNTLV------GEIQKVEP----LITASRTK 61
Query: 236 FIEVVWDYLSGKLKK--DLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRI 293
+ ++ L KL++ D + + H + + ++ +GS D KVW
Sbjct: 62 QVRLLVQRLQEKLRQHCDHNFYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDT 121
Query: 294 RSGQCLRRLERAHSEGVTSLVFSRD-GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYV 352
SG+ L LE H V ++ F+ G +I + SFD T ++ ++GK FRGH++ +
Sbjct: 122 ASGEELHTLE-GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEI 180
Query: 353 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 412
F + V T S D T K+WD++S + + T L G A + S+ F + D
Sbjct: 181 VCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVT------LTGHLAEIISLS-FDTSGDR 233
Query: 413 IVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSH 471
I+ + ++ + G+ V + E +A S I D+ +
Sbjct: 234 IITGSFDHTVVVWDASTGRKVHTLIGHCAE---ISSALFSWDCSLILTGSMDKTCMLWDA 290
Query: 472 QSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
SGK + H+ +++ L+AT D T +++
Sbjct: 291 TSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVY 330
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 235 (87.8 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 66/201 (32%), Positives = 103/201 (51%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G S C +F+ + +V+ S G + + WD + K+ + T M H ++ +
Sbjct: 61 GHTSAVGCIQFNSSEERVVAGSLSGSLRL-WDLEAAKILR--------TLMGHKASISSL 111
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F E LASGS D IK+W +R C+ R + H++ V L FS DG + S S DST
Sbjct: 112 DFHPMGEYLASGSVDSNIKLWDVRRKGCVFRY-KGHTQAVRCLAFSPDGKWLASASDDST 170
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
++ L +GK++ EF H+S VN F + + + S+D TVK+WDL+ + + + +
Sbjct: 171 VKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSE-- 228
Query: 391 PPLRGGDASVNSVHLFPKNPD 411
G V SV LF NPD
Sbjct: 229 ----GETGVVRSV-LF--NPD 242
Score = 179 (68.1 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 55/208 (26%), Positives = 95/208 (45%)
Query: 305 AHSEGVTSLVFSRDGSQILSTSF-DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 363
AHS V+SLV + ++L+T D I + + GH+S V F + R
Sbjct: 18 AHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEER 77
Query: 364 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 423
VV S ++++WDL++ L+T L G AS++S+ P +++ + S+I
Sbjct: 78 VVAGSLSGSLRLWDLEAAKILRT------LMGHKASISSLDFHPMG-EYLASGSVDSNIK 130
Query: 424 IMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH 483
+ ++ + G + +A SP G+W+ +D + + +GK+ H
Sbjct: 131 LWDVRRKGCVFRYKGHTQAVRCLA--FSPDGKWLASASDDSTVKLWDLIAGKMITEFTSH 188
Query: 484 EKDVIGVTHHPHRNLLATYGEDCTMKLW 511
V V HP+ LLA+ D T+KLW
Sbjct: 189 TSAVNVVQFHPNEYLLASGSADRTVKLW 216
Score = 165 (63.1 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 47/186 (25%), Positives = 87/186 (46%)
Query: 198 DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
D+ + T+ G K+ F P G++L S S D I++ WD +K ++
Sbjct: 91 DLEAAKILRTL-MGHKASISSLDFHPMGEYLASGSVDSNIKL-WDVR----RKGCVFR-- 142
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
+ H + V C+ FS D + LAS S D +K+W + +G+ + +H+ V + F
Sbjct: 143 --YKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFT-SHTSAVNVVQFHP 199
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ + S S D T ++ L+ ++ G + V +F DGS + + S + T++V+
Sbjct: 200 NEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN-TLRVYG 258
Query: 378 LKSTDC 383
+ C
Sbjct: 259 WEPDRC 264
Score = 158 (60.7 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 29/132 (21%), Positives = 65/132 (49%)
Query: 258 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 316
+ + H V + + S +LA+G +D ++ +W + C+ L H+ V + F+
Sbjct: 14 QEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLT-GHTSAVGCIQFN 72
Query: 317 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
++++ S + R+ L++ K+L+ GH + ++ F G + + S D +K+W
Sbjct: 73 SSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLW 132
Query: 377 DLKSTDCLQTFK 388
D++ C+ +K
Sbjct: 133 DVRRKGCVFRYK 144
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 229 (85.7 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 79/338 (23%), Positives = 146/338 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G K+D ++ P G +S F P +VS S D I+V WDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV-WDYETGD 141
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 142 FERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHD 192
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + +
Sbjct: 193 HNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSI 422
S+D TV+VW + + +C + + ++S +S+ K
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPF 310
Query: 423 YIMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSG 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 475 KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ + HE V + H + T D T+K+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 57/205 (27%), Positives = 88/205 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLSG 246
+A + M+ + +K T H E R + DG + SCS D + V W +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRV-WVVATK 266
Query: 247 KLKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIR 294
+ K +L ++ + + + I + SE L SGS+D IK+W +
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
+G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 327 TGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLK 379
F VVT S D TVKVW+ +
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 229 (85.7 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 79/338 (23%), Positives = 146/338 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G K+D ++ P G +S F P +VS S D I+V WDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV-WDYETGD 141
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 142 FERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHD 192
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + +
Sbjct: 193 HNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSI 422
S+D TV+VW + + +C + + ++S +S+ K
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPF 310
Query: 423 YIMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSG 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 475 KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ + HE V + H + T D T+K+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 57/205 (27%), Positives = 88/205 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLSG 246
+A + M+ + +K T H E R + DG + SCS D + V W +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRV-WVVATK 266
Query: 247 KLKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIR 294
+ K +L ++ + + + I + SE L SGS+D IK+W +
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
+G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 327 TGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLK 379
F VVT S D TVKVW+ +
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 229 (85.7 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 79/338 (23%), Positives = 146/338 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G K+D ++ P G +S F P +VS S D I+V WDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV-WDYETGD 141
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 142 FERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHD 192
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + +
Sbjct: 193 HNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSI 422
S+D TV+VW + + +C + + ++S +S+ K
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPF 310
Query: 423 YIMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSG 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 475 KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ + HE V + H + T D T+K+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 57/205 (27%), Positives = 88/205 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLSG 246
+A + M+ + +K T H E R + DG + SCS D + V W +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRV-WVVATK 266
Query: 247 KLKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIR 294
+ K +L ++ + + + I + SE L SGS+D IK+W +
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
+G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 327 TGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLK 379
F VVT S D TVKVW+ +
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 229 (85.7 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 79/338 (23%), Positives = 146/338 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G K+D ++ P G +S F P +VS S D I+V WDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV-WDYETGD 141
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 142 FERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHD 192
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + +
Sbjct: 193 HNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSI 422
S+D TV+VW + + +C + + ++S +S+ K
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPF 310
Query: 423 YIMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSG 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 475 KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ + HE V + H + T D T+K+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 57/205 (27%), Positives = 88/205 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLSG 246
+A + M+ + +K T H E R + DG + SCS D + V W +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRV-WVVATK 266
Query: 247 KLKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIR 294
+ K +L ++ + + + I + SE L SGS+D IK+W +
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
+G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 327 TGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLK 379
F VVT S D TVKVW+ +
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 229 (85.7 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 79/338 (23%), Positives = 146/338 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G K+D ++ P G +S F P +VS S D I+V WDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV-WDYETGD 141
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 142 FERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHD 192
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + +
Sbjct: 193 HNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSI 422
S+D TV+VW + + +C + + ++S +S+ K
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPF 310
Query: 423 YIMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSG 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 475 KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ + HE V + H + T D T+K+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 57/205 (27%), Positives = 88/205 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLSG 246
+A + M+ + +K T H E R + DG + SCS D + V W +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRV-WVVATK 266
Query: 247 KLKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIR 294
+ K +L ++ + + + I + SE L SGS+D IK+W +
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
+G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 327 TGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLK 379
F VVT S D TVKVW+ +
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVWECR 410
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 229 (85.7 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 79/338 (23%), Positives = 146/338 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G K+D ++ P G +S F P +VS S D I+V WDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV-WDYETGD 141
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 142 FERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHD 192
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + +
Sbjct: 193 HNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSI 422
S+D TV+VW + + +C + + ++S +S+ K
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPF 310
Query: 423 YIMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSG 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 475 KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ + HE V + H + T D T+K+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 57/205 (27%), Positives = 88/205 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLSG 246
+A + M+ + +K T H E R + DG + SCS D + V W +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRV-WVVATK 266
Query: 247 KLKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIR 294
+ K +L ++ + + + I + SE L SGS+D IK+W +
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
+G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 327 TGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLK 379
F VVT S D TVKVW+ +
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVWECR 410
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 229 (85.7 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 79/338 (23%), Positives = 146/338 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G K+D ++ P G +S F P +VS S D I+V WDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV-WDYETGD 141
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 142 FERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHD 192
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + +
Sbjct: 193 HNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSI 422
S+D TV+VW + + +C + + ++S +S+ K
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPF 310
Query: 423 YIMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSG 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 475 KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ + HE V + H + T D T+K+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 57/205 (27%), Positives = 88/205 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLSG 246
+A + M+ + +K T H E R + DG + SCS D + V W +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRV-WVVATK 266
Query: 247 KLKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIR 294
+ K +L ++ + + + I + SE L SGS+D IK+W +
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
+G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 327 TGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLK 379
F VVT S D TVKVW+ +
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 229 (85.7 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 79/338 (23%), Positives = 146/338 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G K+D ++ P G +S F P +VS S D I+V WDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV-WDYETGD 141
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 142 FERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHD 192
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + +
Sbjct: 193 HNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSI 422
S+D TV+VW + + +C + + ++S +S+ K
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPF 310
Query: 423 YIMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSG 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 475 KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ + HE V + H + T D T+K+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 57/205 (27%), Positives = 88/205 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLSG 246
+A + M+ + +K T H E R + DG + SCS D + V W +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRV-WVVATK 266
Query: 247 KLKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIR 294
+ K +L ++ + + + I + SE L SGS+D IK+W +
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
+G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 327 TGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLK 379
F VVT S D TVKVW+ +
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 228 (85.3 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 79/258 (30%), Positives = 119/258 (46%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F H + V C++FS +++ LASGS D + VW ++ R H + VT + FS G
Sbjct: 15 FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFT-GHKDAVTCVNFSPSG 73
Query: 320 SQILSTSFDSTARIH--GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ S S D T RI +K + FR H++ V F +DG VTAS D TVKVW
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTVKVW- 130
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPD-HIVVC---NKTSSIYIMTLQGQVVK 433
+T Q F L +N V +PD ++V +KT ++ + + + V
Sbjct: 131 --ATH-RQKF-----LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSR-ECVH 181
Query: 434 SFSSGKREGGDFVAAC-VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 492
S+ E G FV P G I G D + + ++ +L ++H V G++
Sbjct: 182 SYC----EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSF 237
Query: 493 HPHRNLLATYGEDCTMKL 510
HP N L T D T+K+
Sbjct: 238 HPSGNYLITASSDSTLKI 255
Score = 226 (84.6 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 78/305 (25%), Positives = 132/305 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + C FS + + L S S D + +VW +K Q +A F H + V C+
Sbjct: 17 GHRDAVTCVDFSINTKQLASGSMDSCL-MVWH-----MKP--QSRAYR-FTGHKDAVTCV 67
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
FS +LASGS+D +++W + + + + RAH+ V S+ F DG ++ S D T
Sbjct: 68 NFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
++ K L H ++V A F+ DG +V+AS D TVK+WD S +C+ ++
Sbjct: 127 VKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCE- 185
Query: 391 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKSFS--SGKREGGDFVA 447
GG V V P I +++ + ++ ++++ + S G F
Sbjct: 186 ---HGG--FVTYVDFHPSGTC-IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSF-- 237
Query: 448 ACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCT 507
P G ++ D L G+L + + H+ V A+ G D
Sbjct: 238 ---HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQ 294
Query: 508 MKLWK 512
+ +WK
Sbjct: 295 VMVWK 299
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 55/214 (25%), Positives = 86/214 (40%)
Query: 299 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
L R + H + VT + FS + Q+ S S DS + +K F GH V F+
Sbjct: 11 LERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 359 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 418
G + + S D TV++W + + T R A+V SVH F + V +
Sbjct: 71 PSGHLLASGSRDKTVRIW-VPNVKGESTV-----FRAHTATVRSVH-FCSDGQSFVTASD 123
Query: 419 TSSIYIMTLQGQVVKSFSSGKREGGDFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 477
++ + Q F + ++V A SP G I +D+ + + S +
Sbjct: 124 DKTVKVWATHRQ---KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECV 180
Query: 478 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H H V V HP +A G D T+K+W
Sbjct: 181 HSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 228 (85.3 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 79/338 (23%), Positives = 146/338 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G K+D ++ P G +S F P +VS S D I+V WDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV-WDYETGD 141
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 142 FERTLKG--------HTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHD 192
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + +
Sbjct: 193 HNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSI 422
S+D TV+VW + + +C + + ++S +S+ K
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPF 310
Query: 423 YIMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSG 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 475 KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ + HE V + H + T D T+K+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 57/205 (27%), Positives = 88/205 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLSG 246
+A + M+ + +K T H E R + DG + SCS D + V W +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRV-WVVATK 266
Query: 247 KLKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIR 294
+ K +L ++ + + + I + SE L SGS+D IK+W +
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
+G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 327 TGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLK 379
F VVT S D TVKVW+ +
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 230 (86.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 74/302 (24%), Positives = 130/302 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G K+ FSP G+ L + S+D F+ ++W+ K Q +A ++ H + V +
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFL-MLWN-----CKP--QARAFR-YVGHKDVVTSV 66
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+FS +LAS S+D +++W I + +AH+ V S+ FS DG + + S D +
Sbjct: 67 QFSPLGNLLASASRDRTVRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
++ + + L H+ +V A F+ DG +V+ S D T+K+WD + C+ F
Sbjct: 126 IKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD- 184
Query: 391 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV 450
SV + NP+ + + S + +V K + G
Sbjct: 185 --------SVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSF 236
Query: 451 SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKL 510
P G +I D L G+L + ++ H V V+ L ++ G D + L
Sbjct: 237 HPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLL 296
Query: 511 WK 512
W+
Sbjct: 297 WR 298
Score = 229 (85.7 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 83/303 (27%), Positives = 131/303 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G K +FSP G L S S D + + W + K K +++A H V +
Sbjct: 58 GHKDVVTSVQFSPLGNLLASASRDRTVRL-W--IPDKRGKSSEFKA------HTAPVRSV 108
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+FS D + LA+ S+D IKVW + + L L R H+ V FS DG I+S S D T
Sbjct: 109 DFSADGQFLATASEDKSIKVWNMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
+I + + + F + N F +G+ + +A SD TVK+WD++ LQ ++
Sbjct: 168 IKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVH 227
Query: 391 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM---------TLQGQVVKSFSSGKRE 441
GG VN V P ++I+ + ++ I+ TLQG F+ +
Sbjct: 228 S---GG---VNCVSFHPSG-NYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSK 280
Query: 442 GGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL---MKVHEKDVIGVTHHPHRNL 498
GG+ ++ + ++ D L C L+ L H D+ T HPH
Sbjct: 281 GGELFSSGGADTQVLLWRTNFDY-LNCKDMIKRNLKRLHFDSSPHLVDIYPRTPHPHEGK 339
Query: 499 LAT 501
+ T
Sbjct: 340 IET 342
Score = 201 (75.8 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 75/256 (29%), Positives = 115/256 (44%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR-SGQCLRRLERAHSEGVTSLVFSRD 318
F H + ++FS + LA+ S D + +W + + R + H + VTS+ FS
Sbjct: 14 FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYV--GHKDVVTSVQFSPL 71
Query: 319 GSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
G+ + S S D T R+ K GK EF+ H++ V F+ DG + TAS D ++KVW+
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKS-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWN 130
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH--IVVCNKTSSIYIM-TLQGQVVKS 434
+ Q F L + V +PD IV C++ +I I T Q V +
Sbjct: 131 MYR----QRF-----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 435 FSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP 494
FS +FV +P G I G D + + + KL +VH V V+ HP
Sbjct: 182 FSDSVGFA-NFVD--FNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHP 238
Query: 495 HRNLLATYGEDCTMKL 510
N + T D T+K+
Sbjct: 239 SGNYIITASSDGTLKI 254
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 52/217 (23%), Positives = 88/217 (40%)
Query: 299 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
L R + H +TS+ FS G Q+ + S+D+ + K + GH V F+
Sbjct: 10 LERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFS 69
Query: 359 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 418
G+ + +AS D TV++W FK A V SV F + + ++
Sbjct: 70 PLGNLLASASRDRTVRLWIPDKRGKSSEFK------AHTAPVRSVD-FSADGQFLATASE 122
Query: 419 TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 478
SI + + Q + S R A SP G I ED+ + + + + +
Sbjct: 123 DKSIKVWNMYRQ--RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 479 LMKVHEKDVIG----VTHHPHRNLLATYGEDCTMKLW 511
+ D +G V +P+ +A+ G D T+K+W
Sbjct: 181 ----NFSDSVGFANFVDFNPNGTCIASAGSDHTVKIW 213
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 226 (84.6 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 63/229 (27%), Positives = 114/229 (49%)
Query: 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLC 269
FG + C SP+ +++ + S DG I++ W L+ +L+ T H +
Sbjct: 51 FGHEKSVTCVSVSPNKRWIATSSSDGTIKI-WSALTFRLEC--------TLFGHYRGISQ 101
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
++++ S+ LAS S D I++W +C R + H+ V+S+ F+ G+ ++S S+D
Sbjct: 102 VKWATGSKYLASASDDKTIRIWDFEK-RCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDE 160
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
T RI L+ G L+ HS + + DG+ TAS D ++WD+ S CL+T
Sbjct: 161 TVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVE 220
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSS 437
P + ++++ F +N +++V N S I + + +VV+ F S
Sbjct: 221 PI-----NVPLSNLQ-FTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDS 263
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 36/127 (28%), Positives = 67/127 (52%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
T H+++V C+ S + +A+ S DG IK+W + + L H G++ + ++
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFR-LECTLFGHYRGISQVKWATG 107
Query: 319 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
+ S S D T RI + ++ +GH++YV+ F G+ +V+ S D TV++W+L
Sbjct: 108 SKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNL 167
Query: 379 KSTDCLQ 385
+ CL+
Sbjct: 168 QDGTCLR 174
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 34/138 (24%), Positives = 67/138 (48%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G ++ F+P G LVS S+D + + W+ G + L H E ++ +
Sbjct: 136 GHTNYVSSIDFNPLGTLLVSGSWDETVRI-WNLQDGTCLRMLP--------AHSEPIISV 186
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
S D + A+ S DG ++W + SGQCL+ L + +++L F+ + +L ++ +S
Sbjct: 187 SISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQ 246
Query: 331 ARIHGLKSGKLLKEFRGH 348
R+ + ++++ F H
Sbjct: 247 IRLWDYRRNRVVRIFDSH 264
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 226 (84.6 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 78/338 (23%), Positives = 146/338 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G K+D ++ P G +S F P +VS S D I+V WDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV-WDYETGD 141
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 142 FERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHD 192
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
V+S+ +G I+S + D T ++ +++G +K F GH +V DG+ + +
Sbjct: 193 HNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSI 422
S+D TV+VW + + +C + + ++S +S+ K
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPF 310
Query: 423 YIMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSG 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 475 KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ + HE V + H + T D T+K+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 58/206 (28%), Positives = 91/206 (44%)
Query: 189 TAAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLS 245
+AA + ++ M+ + +K T H E R + DG + SCS D + V W +
Sbjct: 209 SAARDKTIK-MWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRV-WVVAT 265
Query: 246 GKLKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRI 293
+ K +L ++ + + + I + SE L SGS+D IK+W +
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 294 RSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVN 353
+G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 326 STGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 384
Query: 354 DAIFTNDGSRVVTASSDCTVKVWDLK 379
F VVT S D TVKVW+ +
Sbjct: 385 SLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 223 (83.6 bits), Expect = 6.6e-16, P = 6.6e-16
Identities = 83/324 (25%), Positives = 137/324 (42%)
Query: 189 TAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKL 248
T A+ Q ED P+ H K G + C FS + + L S S D + +VW +
Sbjct: 32 TMALPQ--ED--PSLERH-FK-GHRDAVTCVDFSFNMKQLASGSMDSCL-MVWH-----M 79
Query: 249 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 308
K Q +A F H + V C+ FS +LASGS+D +++W + + + + RAH+
Sbjct: 80 KP--QSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTA 135
Query: 309 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 368
V S+ F DG ++ S D T ++ K L H ++V A F+ DG +V+AS
Sbjct: 136 TVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSAS 195
Query: 369 SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ 428
D TVK+WD S +C+ ++ GG V V P + +++ + ++
Sbjct: 196 DDKTVKLWDKTSRECVHSYCE----HGG--FVTYVDFHPSGTC-VAAAGMDNTVKVWDVR 248
Query: 429 GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 488
+ + A P G ++ D L G+L + + H+
Sbjct: 249 TH--RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPAT 306
Query: 489 GVTHHPHRNLLATYGEDCTMKLWK 512
V A+ G D + +WK
Sbjct: 307 TVAFSRTGEYFASGGSDEQVMVWK 330
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 225 (84.3 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 55/168 (32%), Positives = 84/168 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
F+ G LV+ SFD ++WD SG+ L E + C++F+ D ++A
Sbjct: 227 FNTTGDRLVTGSFD-HTAILWDVPSGRKVHVLSGHRGE--------ISCVQFNWDCSLIA 277
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+ S D KVW GQCL L H++ V + F+ G I + S D T+R+ + +
Sbjct: 278 TASLDKSCKVWDAEGGQCLATL-LGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQ 336
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
L + GH ++ F GSRV+TAS D T +VW +K+ CLQ +
Sbjct: 337 CLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLE 384
Score = 216 (81.1 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 64/255 (25%), Positives = 114/255 (44%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
TF H ++C+ F+ S ++A+GS D K+W + SG+ + L H + SL F+
Sbjct: 172 TFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLA-GHFAEIISLCFNTT 230
Query: 319 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
G ++++ SFD TA + + SG+ + GH ++ F D S + TAS D + KVWD
Sbjct: 231 GDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDA 290
Query: 379 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK--TSSIYIMTLQGQVVKSFS 436
+ CL T L G + V V F I + TS ++ T Q +
Sbjct: 291 EGGQCLAT------LLGHNDEVLDV-CFNYTGQLIATASADGTSRVF-STDTFQCLCQLE 342
Query: 437 SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 496
K G+ C + +G + D+ + ++G +++ H ++ +
Sbjct: 343 GHK---GEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEG 399
Query: 497 NLLATYGEDCTMKLW 511
+ + T +D T ++W
Sbjct: 400 DTIITGSKDNTCRIW 414
Score = 212 (79.7 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 49/171 (28%), Positives = 87/171 (50%)
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDE 265
H + G + C +F+ D + + S D +V WD G Q T + H++
Sbjct: 255 HVLS-GHRGEISCVQFNWDCSLIATASLDKSCKV-WDAEGG--------QCLATLLGHND 304
Query: 266 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST 325
VL + F+ +++A+ S DG +V+ + QCL +LE H ++ + F+ GS++L+
Sbjct: 305 EVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLE-GHKGEISKVCFNAQGSRVLTA 363
Query: 326 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
S D T+R+ +K+G L+ GHS + F +G ++T S D T ++W
Sbjct: 364 SVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 177 (67.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 62/246 (25%), Positives = 111/246 (45%)
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD-GSQILSTSFD 328
+ F++ +GS D K+W SG+ L LE H V ++ F+ G ++ + SFD
Sbjct: 98 VAFNKSGSCFITGSYDRTCKIWDTASGEELHTLE-GHRNVVYAIAFNNPYGDKVATGSFD 156
Query: 329 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
T ++ ++GK FRGH++ + F + V T S D T K+WD++S + + T
Sbjct: 157 KTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVST-- 214
Query: 389 PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKREGGDFVA 447
L G A + S+ F D +V + + + + G+ V S G R G+
Sbjct: 215 ----LAGHFAEIISL-CFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLS-GHR--GEI-- 264
Query: 448 ACVSPKGEW--IYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
+CV + I D++ + + G+ + H +V+ V + L+AT D
Sbjct: 265 SCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASAD 324
Query: 506 CTMKLW 511
T +++
Sbjct: 325 GTSRVF 330
Score = 166 (63.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 52/214 (24%), Positives = 92/214 (42%)
Query: 299 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
L R +AH +T++ F++ GS ++ S+D T +I SG+ L GH + V F
Sbjct: 84 LFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 359 ND-GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN 417
N G +V T S D T K+W ++ C TF RG A + + NP +V
Sbjct: 144 NPYGDKVATGSFDKTCKLWSAETGKCFYTF------RGHTAEIVCLAF---NPQSTLVAT 194
Query: 418 KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 477
+ + + S+ + ++ C + G+ + D + SG+
Sbjct: 195 GSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKV 254
Query: 478 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H++ H ++ V + +L+AT D + K+W
Sbjct: 255 HVLSGHRGEISCVQFNWDCSLIATASLDKSCKVW 288
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 206 (77.6 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 55/160 (34%), Positives = 80/160 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G S E R + + +V+ S G I V WD + K+ + T M H + +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRV-WDLEAAKILR--------TLMGHKANICSL 111
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 112 DFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHT 170
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSD 370
++ L +GK++ EF GH+ VN F + + + SSD
Sbjct: 171 VKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 173 (66.0 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 44/145 (30%), Positives = 69/145 (47%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H V + + E++ +GSQ G I+VW + + + LR L H + SL F G +
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL-MGHKANICSLDFHPYGEFV 120
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
S S D+ ++ ++ + +RGHS V F+ DG + +A+ D TVK+WDL +
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 383 CLQTFKPPPPLRGGDASVNSVHLFP 407
+ F P G VN V P
Sbjct: 181 MMSEF-P-----GHTGPVNVVEFHP 199
Score = 141 (54.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 258 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 316
+ + H V + + S +LA+G D ++ +W I C+ L H+ V S+ +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVRLN 72
Query: 317 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
I++ S + R+ L++ K+L+ GH + + F G V + S D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 377 DLKSTDCLQTFK 388
D++ C+ ++
Sbjct: 133 DIRRKGCVFRYR 144
Score = 139 (54.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 45/204 (22%), Positives = 86/204 (42%)
Query: 305 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 363
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 364 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 423
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 130
Query: 424 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 481
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 482 VHEKDVIGVTHHPHRNLLATYGED 505
H V V HP+ LLA+ D
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSD 210
Score = 124 (48.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 41/177 (23%), Positives = 75/177 (42%)
Query: 337 KSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRG 395
K+ L+E H+S V+ + R++ T DC V +W + +C+ + L G
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTG 61
Query: 396 GDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 454
+ V SV L P+ ++V S SI + L+ + G + + + P G
Sbjct: 62 HTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYG 117
Query: 455 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
E++ +D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 224 (83.9 bits), Expect = 8.5e-16, P = 8.5e-16
Identities = 82/343 (23%), Positives = 151/343 (44%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G K+D ++ P G +S F P +VS S D I+V WDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV-WDYETGD 141
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 142 FERTLKG--------HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMH-GHD 192
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + +
Sbjct: 193 HNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSI----- 422
S+D TV+VW + + +C LR + V + P++ + + T S
Sbjct: 253 SNDQTVRVWVVATKEC------KAELREHEHVVECISWAPES-SYSTISEATGSETKKSG 305
Query: 423 ----YIMT-LQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCF 469
++++ + + +K + S+G G D +V + G ++I +D+ L +
Sbjct: 306 KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 470 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
++ + + HE V + H + T D T+K+W+
Sbjct: 366 DFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 58/205 (28%), Positives = 88/205 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLSG 246
+A + M+ + +K T H E R + DG + SCS D + V W +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRV-WVVATK 266
Query: 247 KLKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIR 294
+ K +L ++ + + + I + SE L SGS+D IK+W I
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDIS 326
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
+G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 327 TGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTS 385
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLK 379
F VVT S D TVKVW+ +
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 205 (77.2 bits), Expect = 9.3e-16, P = 9.3e-16
Identities = 58/179 (32%), Positives = 87/179 (48%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+DG + + WD +G + F+ H + VL + FS D+ + S
Sbjct: 31 SSDGQFALSGSWDGTLRL-WDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVS 81
Query: 282 GSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 82 GSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 140
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 141 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGD 193
Score = 160 (61.4 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 52/189 (27%), Positives = 81/189 (42%)
Query: 300 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 359
+R R HS V+ +V S DG LS S+D T R+ L +G + F GH+ V F++
Sbjct: 15 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 74
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV-CNK 418
D ++V+ S D T+K+W+ C T + V+ V P + + I+V C
Sbjct: 75 DNRQIVSGSRDKTIKLWNTLGV-CKYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGW 129
Query: 419 TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 478
+ + L +K+ G G VSP G G+D + GK H
Sbjct: 130 DKLVKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--H 185
Query: 479 LMKVHEKDV 487
L + D+
Sbjct: 186 LYTLDGGDI 194
Score = 149 (57.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H V + S D + SGS DG +++W + +G RR H++ V S+ FS D QI
Sbjct: 21 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQI 79
Query: 323 LSTSFDSTARI-HGLKSGKLLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDL 378
+S S D T ++ + L K + HS +V+ F+ + S +V+ D VKVW+L
Sbjct: 80 VSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 138
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 218 (81.8 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 67/234 (28%), Positives = 106/234 (45%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+D + + WD G + F H + V+ + FS D+ + S
Sbjct: 79 SHDGQFALSGSWDNTLRL-WDITKGV--------STRLFKGHTQDVMSVAFSSDNRQIIS 129
Query: 282 GSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 339
GS+D IKVW G+C LE AH + V+ + FS + I+S S+D+ +I +KS
Sbjct: 130 GSRDATIKVWNTL-GECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSF 188
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 399
K H+ YVN + DGS + D +W+L S L + + S
Sbjct: 189 KCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINALAFS 248
Query: 400 VNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR-EGGDFVAACVS 451
N L D I++ + + + + +V + +F S K+ E AC+S
Sbjct: 249 PNKYWLSAATDDKIIIWDLLTKQVLAEIVPEVKEQAFDSKKKKESKPKAPACLS 302
Score = 174 (66.3 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 64/257 (24%), Positives = 115/257 (44%)
Query: 263 HDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRS------GQCLRRLERAHSEGVTSLVF 315
H+ V I S ++ + + S S+D + VW++ G+ R L + HS V +V
Sbjct: 20 HNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSL-KGHSHFVQDVVI 78
Query: 316 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 375
S DG LS S+D+T R+ + G + F+GH+ V F++D ++++ S D T+KV
Sbjct: 79 SHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKV 138
Query: 376 WDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSF 435
W+ +C T + P + V+ + P P IV + + + I ++ K
Sbjct: 139 WNTLG-ECKFTLEGPEAHQDW---VSCIRFSPNTPT-IVSGSWDNKVKIWDIKS--FKCN 191
Query: 436 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHP 494
+ G +SP G G+D + SGK L K+ ++ I + P
Sbjct: 192 HTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGK--PLYKLEARNTINALAFSP 249
Query: 495 HRNLLATYGEDCTMKLW 511
++ L+ +D + +W
Sbjct: 250 NKYWLSAATDDKII-IW 265
Score = 167 (63.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 43/134 (32%), Positives = 67/134 (50%)
Query: 255 QADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV 314
+A + H V + S D + SGS D +++W I G R L + H++ V S+
Sbjct: 61 KAHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTR-LFKGHTQDVMSVA 119
Query: 315 FSRDGSQILSTSFDSTARI-HGLKSGKLLKEF-RGHSSYVNDAIFTNDGSRVVTASSDCT 372
FS D QI+S S D+T ++ + L K E H +V+ F+ + +V+ S D
Sbjct: 120 FSSDNRQIISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNK 179
Query: 373 VKVWDLKSTDCLQT 386
VK+WD+KS C T
Sbjct: 180 VKIWDIKSFKCNHT 193
Score = 155 (59.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 58/216 (26%), Positives = 96/216 (44%)
Query: 306 HSEGVTSLVFSRDGSQ-ILSTSFDSTARIHGL------KSGKLLKEFRGHSSYVNDAIFT 358
H+ VTS+ S + I+S+S D T + L GK + +GHS +V D + +
Sbjct: 20 HNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVIS 79
Query: 359 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 418
+DG ++ S D T+++WD+ + FK G V SV F + I+ ++
Sbjct: 80 HDGQFALSGSWDNTLRLWDITKGVSTRLFK------GHTQDVMSV-AFSSDNRQIISGSR 132
Query: 419 TSSIYIMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKL 476
++I + G+ K G D+V+ C+ SP I D + + +S K
Sbjct: 133 DATIKVWNTLGEC-KFTLEGPEAHQDWVS-CIRFSPNTPTIVSGSWDNKVKIWDIKSFKC 190
Query: 477 EHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
H + H V VT P +L A+ G+D LW+
Sbjct: 191 NHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWE 226
Score = 116 (45.9 bits), Expect = 0.00066, P = 0.00066
Identities = 39/137 (28%), Positives = 67/137 (48%)
Query: 211 GTKSHAE---CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
G ++H + C RFSP+ +VS S+D +++ WD S ++ + T H V
Sbjct: 151 GPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKI-WDIKS--------FKCNHTLTDHTGYV 201
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
+ S D + ASG +D +W + SG+ L +LE ++ + +L FS + LS +
Sbjct: 202 NTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNT--INALAFSPN-KYWLSAAT 258
Query: 328 DSTARIHGLKSGKLLKE 344
D I L + ++L E
Sbjct: 259 DDKIIIWDLLTKQVLAE 275
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 225 (84.3 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 73/261 (27%), Positives = 127/261 (48%)
Query: 252 LQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVT 311
+++ AD+ F ++V C+++ D E++ SGS+D + VW + S L +L HS V
Sbjct: 209 IRFPADQDFRATLDSVYCVQY--DDEIMVSGSKDRTVSVWDVNSRFILYKLY-GHSGSVL 265
Query: 312 SLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDC 371
L F R + ++S S DST I ++ + LK + GH+ V + + + ++++S D
Sbjct: 266 CLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSEN--YIISSSRDH 323
Query: 372 TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQ 430
T +VW L +T + LRG ASVNSV K IV + ++ + G
Sbjct: 324 TARVWRLDATSPAEACMHV--LRGHLASVNSVQYSSKT-GLIVTASSDRTLRTWDITTGH 380
Query: 431 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGV 490
++ + +R G AC G++I D + F SGKL +++ HE D+I
Sbjct: 381 CIRIIHAHQR--G---IACAQYNGKFIVSGSSDLTIRIFEASSGKLLRMLQGHE-DLIRT 434
Query: 491 THHPHRNLLATYGEDCTMKLW 511
+++ G D T+++W
Sbjct: 435 VRFNDEKIVSG-GYDGTVRIW 454
Score = 186 (70.5 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 80/304 (26%), Positives = 138/304 (45%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE 277
C ++ D + +VS S D + V WD S + + Y+ H +VLC++F R
Sbjct: 226 CVQY--DDEIMVSGSKDRTVSV-WDVNS----RFILYK----LYGHSGSVLCLDFCRRRN 274
Query: 278 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 337
+L SGS D I +W ++ + L+ + H++ V +V S + I+S+S D TAR+ L
Sbjct: 275 LLVSGSSDSTIIIWDWQNRRPLK-VYFGHTDNVLGVVVSEN--YIISSSRDHTARVWRLD 331
Query: 338 SGK----LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPL 393
+ + RGH + VN +++ +VTASSD T++ WD+ + C++
Sbjct: 332 ATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQ-- 389
Query: 394 RG-GDASVNSVHLFPKNPDHIV-VCNKTSSIYIMTLQGQ--VVKS--FSSGKREGGDFVA 447
RG A N + + D + + +S + LQG ++++ F+ K G +
Sbjct: 390 RGIACAQYNGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEKIVSGGYDG 449
Query: 448 ACVSPKGEWIYCVGEDRNLYCFSHQS--GKLEHLMKVHEKDVIGVTHHPHRNLLATY--G 503
W + GE +C H S ++ L H + +I TH L+ + G
Sbjct: 450 TVRI----WNFNTGEQ---HCVLHNSRNSRVFGLQFDHRR-IIACTHSSEI-LVWNFDDG 500
Query: 504 EDCT 507
DCT
Sbjct: 501 LDCT 504
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 216 (81.1 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 65/221 (29%), Positives = 104/221 (47%)
Query: 214 SH--AECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 271
SH ++C S DG + +S S+D + + W+ SG Q TF+ H VL +
Sbjct: 63 SHIVSDCV-ISSDGAYALSASWDKSLRL-WELSSG--------QTTRTFVGHTNDVLSVS 112
Query: 272 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRL-ERAHSEGVTSLVFSRDGSQ--ILSTSFD 328
FS D+ + SGS+D IK+W G C + ++ H+E V+ + FS + I+S +D
Sbjct: 113 FSADNRQIVSGSRDRTIKLWNTL-GDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWD 171
Query: 329 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
++ L S +L + GH+ Y+N + DGS + D +WDL + L +
Sbjct: 172 KLVKVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYS-- 229
Query: 389 PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS-IYIMTLQ 428
L GD +H +P+ +C TSS I I L+
Sbjct: 230 ----LHAGD----EIHALVFSPNRYWLCAATSSSITIFDLE 262
Score = 181 (68.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 68/243 (27%), Positives = 108/243 (44%)
Query: 263 HDETVLCIEFSRDS-EMLASGSQDGKIKVWRI-RSGQCL----RRLERAHSEGVTSLVFS 316
H+ V + S ++ ML SGS+D + +W + R Q R LE HS V+ V S
Sbjct: 14 HNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLE-GHSHIVSDCVIS 72
Query: 317 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
DG+ LS S+D + R+ L SG+ + F GH++ V F+ D ++V+ S D T+K+W
Sbjct: 73 SDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLW 132
Query: 377 DLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK--TSSIYIMTLQGQVVKS 434
+ DC T +G V+ V P NP + V+ + + + L +++
Sbjct: 133 NTLG-DCKYTITD----KGHTEWVSCVRFSP-NPQNPVIVSAGWDKLVKVWELASCRLQT 186
Query: 435 FSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI-GVTHH 493
G G +SP G G+D + K HL +H D I +
Sbjct: 187 DHIGHT--GYINTVTISPDGSLCASGGKDGVTMLWDLNESK--HLYSLHAGDEIHALVFS 242
Query: 494 PHR 496
P+R
Sbjct: 243 PNR 245
Score = 132 (51.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 59/220 (26%), Positives = 95/220 (43%)
Query: 299 LRRLERAHSEGVTSLVFSRDG-SQILSTSFDSTARIHGLKS-----GKLLKEFRGHSSYV 352
LR H+ VTSL S + + +LS S D T I L G + GHS V
Sbjct: 7 LRGTLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIV 66
Query: 353 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 412
+D + ++DG+ ++AS D ++++W+L S +TF G V SV F +
Sbjct: 67 SDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFV------GHTNDVLSVS-FSADNRQ 119
Query: 413 IVVCNKTSSIYIMTLQGQVVKSFSS-GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSH 471
IV ++ +I + G + + G E V +P+ I G D+ + +
Sbjct: 120 IVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWEL 179
Query: 472 QSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
S +L+ H + VT P +L A+ G+D LW
Sbjct: 180 ASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLW 219
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 222 (83.2 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 64/253 (25%), Positives = 109/253 (43%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F H + V C+ FS +LASGS+D +++W I + + + RAH+ V S+ F DG
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
+++ S D T ++ K L H ++V A F+ DG +V+AS D TVK+WD
Sbjct: 116 QSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKT 175
Query: 380 STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGK 439
S +C+ ++ GG V V P I + +++ + ++ + +
Sbjct: 176 SRECVHSYCE----HGG--FVTYVDFHPSGTC-IAAASMDNTVKVWDVRTH--RLLQHYQ 226
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 499
A P G ++ D L G+L + + H+ V
Sbjct: 227 LHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYF 286
Query: 500 ATYGEDCTMKLWK 512
A+ G D + +WK
Sbjct: 287 ASGGSDEQVMVWK 299
Score = 221 (82.9 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 56/181 (30%), Positives = 89/181 (49%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE 277
CARFSPDG+ +VS S D +++ WD K ++ + ++ H V ++F
Sbjct: 150 CARFSPDGRLIVSASDDKTVKL-WD----KTSRECVH----SYCEHGGFVTYVDFHPSGT 200
Query: 278 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 337
+A+ S D +KVW +R+ + L+ + HS V +L F G+ +L+ S DST +I L
Sbjct: 201 CIAAASMDNTVKVWDVRTHRLLQHYQ-LHSAAVNALSFHPSGNYLLTASSDSTLKILDLM 259
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW----DLKS-TDCLQTFKPPPP 392
G+LL GH F+ G + SD V VW D+ + ++ +PP P
Sbjct: 260 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDVVDYREVIKVHRPPAP 319
Query: 393 L 393
L
Sbjct: 320 L 320
Score = 214 (80.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 77/258 (29%), Positives = 117/258 (45%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F H + + ++FS +++ LASGS D + VW ++ R H + VT + FS G
Sbjct: 15 FKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFA-GHKDAVTCVNFSPSG 73
Query: 320 SQILSTSFDSTARIH--GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ S S D T RI +K + FR H++ V F +DG +VTAS D TVKVW
Sbjct: 74 HLLASGSRDKTVRIWIPNVKGESTV--FRAHTATVRSVHFCSDGQSLVTASDDKTVKVW- 130
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPD-HIVVC---NKTSSIYIMTLQGQVVK 433
ST Q F L +N V +PD ++V +KT ++ T + + V
Sbjct: 131 --STH-RQKF-----LFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSR-ECVH 181
Query: 434 SFSSGKREGGDFVAAC-VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 492
S+ E G FV P G I D + + ++ +L ++H V ++
Sbjct: 182 SYC----EHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF 237
Query: 493 HPHRNLLATYGEDCTMKL 510
HP N L T D T+K+
Sbjct: 238 HPSGNYLLTASSDSTLKI 255
Score = 193 (73.0 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 55/185 (29%), Positives = 80/185 (43%)
Query: 205 SHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMH 263
S +F G K C FSP G L S S D + + + G+ F H
Sbjct: 52 SRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGE---------STVFRAH 102
Query: 264 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
TV + F D + L + S D +KVW + L L + H V FS DG I+
Sbjct: 103 TATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQ-HINWVRCARFSPDGRLIV 161
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
S S D T ++ S + + + H +V F G+ + AS D TVKVWD+++
Sbjct: 162 SASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRL 221
Query: 384 LQTFK 388
LQ ++
Sbjct: 222 LQHYQ 226
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 54/214 (25%), Positives = 88/214 (41%)
Query: 299 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
L R + H + +TS+ FS + Q+ S S DS + +K F GH V F+
Sbjct: 11 LERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFS 70
Query: 359 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 418
G + + S D TV++W + + T R A+V SVH F + +V +
Sbjct: 71 PSGHLLASGSRDKTVRIW-IPNVKGESTV-----FRAHTATVRSVH-FCSDGQSLVTASD 123
Query: 419 TSSIYIMTLQGQVVKSFSSGKREGGDFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 477
++ + + Q F + ++V A SP G I +D+ + + S +
Sbjct: 124 DKTVKVWSTHRQ---KFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECV 180
Query: 478 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H H V V HP +A D T+K+W
Sbjct: 181 HSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVW 214
>DICTYBASE|DDB_G0267982 [details] [associations]
symbol:copA "coatomer protein complex alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
Uniprot:Q55FR9
Length = 1221
Score = 207 (77.9 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 59/183 (32%), Positives = 91/183 (49%)
Query: 209 KFGTK-SHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
KF TK S + F P ++++ G I + +DY ++K L+ + DE H+ V
Sbjct: 4 KFETKASRVKGLSFHPTRPWILASLHSGSIHL-YDY---RIKTLLE-KFDE----HEGPV 54
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
I F + SG D KIKVW + +CL L + H + + S+ F R+ I+S+S
Sbjct: 55 RGINFHMTQPLFVSGGDDYKIKVWNYKQRRCLFTL-KGHKDYIRSVEFHREAPWIVSSSD 113
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC-LQT 386
D RI +S + E GH+ YV A+F VV+AS D T+++WD+ + T
Sbjct: 114 DMVIRIWNWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIWDISGLKKKMTT 173
Query: 387 FKP 389
KP
Sbjct: 174 VKP 176
Score = 73 (30.8 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 26/120 (21%), Positives = 48/120 (40%)
Query: 393 LRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSP 452
L G D VN P P +IV + + + + +V +F + + A P
Sbjct: 200 LEGHDRGVNWASFHPTQP-YIVSASDDHQVKLWRMNDPIVDTF---RGHYNNVSCALFHP 255
Query: 453 KGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ + I ED+ + + H+++ + HP++NL A G D M ++K
Sbjct: 256 RQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTLASHPNQNLFAA-GHDSGMIVFK 314
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 223 (83.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 75/343 (21%), Positives = 154/343 (44%)
Query: 176 LLPPGTQF--DLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSF 233
++ P T + D+ A +D P+ +H K +++P+G+ LV ++
Sbjct: 54 VVEPETSYTIDIMPPNAYRGRDRVINLPSKFTHLSSNKVKHVIPAIQWTPEGRRLVVATY 113
Query: 234 DGFIEVVWDYLSGKLKKDLQYQADETFMM-HDETVLCIEFSRDSEMLASGSQDGKIKVWR 292
G + W+ S ET M HD V +++S DS+ + SG DG IK+W+
Sbjct: 114 SGEFSL-WNASSFTF---------ETLMQAHDSAVTTMKYSHDSDWMISGDADGMIKIWQ 163
Query: 293 IRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYV 352
++ ++ AH+E + + FS + S+ ++ S D+ +I +GK + GH V
Sbjct: 164 PNFSM-VKEIDAAHTESIRDMAFSSNDSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDV 222
Query: 353 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 412
+ + + +AS D VK+WD +S +C+ + L+ +V P +
Sbjct: 223 KSCDWHPEMGLIASASKDNLVKLWDPRSGNCISSI-----LKFKH-TVLKTRFQPTKGNL 276
Query: 413 IVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSH 471
++ +K S + ++ + + R+ D++ P E ++ + D +L F
Sbjct: 277 LMAISKDKSCRVFDIRYSMKELMCV--RDETDYMTLEWHPINESMFTLACYDGSLKHFDL 334
Query: 472 QSGKLEHLMKV---HEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
E ++ + H+K + ++++P ++ AT +D T++ W
Sbjct: 335 LQNLNEPILTIPYAHDKCITSLSYNPVGHIFATAAKDRTIRFW 377
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 221 (82.9 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 80/306 (26%), Positives = 132/306 (43%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
F P + SCS D I+V WDY +G+L++ L+ H + V I + L
Sbjct: 114 FHPLWTIMASCSEDATIKV-WDYETGQLERTLKG--------HTDAVNDIAIDAAGKQLV 164
Query: 281 SGSQDGKIKVWRI-RSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 339
S S D IK+W ++ CL+ L + H V+S+ F G +LS S D T + + +G
Sbjct: 165 SCSSDLSIKLWDFGQTYDCLKSL-KGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTG 223
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 399
+ FRGH+ +V +NDG+ +AS D TV VW + LR + +
Sbjct: 224 YCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLV------LRDHEHA 277
Query: 400 VNSVHLFPKNPDHIVVCNKT--SSIYIMTLQGQVVKSFSSGKREGGDFVAACVS------ 451
V V P V + +S +I+ G +S + GD + ++
Sbjct: 278 VECVEWAPDTAYTNVTGQQPEGNSTHIL-FSGSRDRSIKAWNINTGDVLFTLLAHENWVR 336
Query: 452 -----PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDC 506
PKG+++ V +D+ L + + + ++ HE V V H + T D
Sbjct: 337 GLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDM 396
Query: 507 TMKLWK 512
+ K+W+
Sbjct: 397 SCKVWE 402
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 51/175 (29%), Positives = 76/175 (43%)
Query: 220 RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDS--- 276
R S DG S S D + VW + + K L+ D H+ V C+E++ D+
Sbjct: 240 RISNDGTLFASASLDQTV-TVWSFATKSAKLVLR---D-----HEHAVECVEWAPDTAYT 290
Query: 277 ------------EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILS 324
+L SGS+D IK W I +G L L AH V L F G ++S
Sbjct: 291 NVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTL-LAHENWVRGLAFHPKGKYLIS 349
Query: 325 TSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
+ D T R+ L + + +K H +V+ F V+T S D + KVW+ +
Sbjct: 350 VADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
Score = 147 (56.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 50/187 (26%), Positives = 93/187 (49%)
Query: 306 HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV 365
H +T ++F + + S S D+T ++ ++G+L + +GH+ VND G ++V
Sbjct: 105 HRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLV 164
Query: 366 TASSDCTVKVWDLKST-DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYI 424
+ SSD ++K+WD T DCL++ L+G + +V+SV P D ++ ++ +I
Sbjct: 165 SCSSDLSIKLWDFGQTYDCLKS------LKGHEHTVSSVTFLPTG-DFVLSASRDHTIKQ 217
Query: 425 MTLQ-GQVVKSFSSGKREGGDFVAAC-VSPKGEWIYCVGEDRNL--YCFSHQSGKLEHLM 480
+ G V +F R D+V +S G D+ + + F+ +S KL ++
Sbjct: 218 WDISTGYCVYTF----RGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKL--VL 271
Query: 481 KVHEKDV 487
+ HE V
Sbjct: 272 RDHEHAV 278
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 215 (80.7 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 65/221 (29%), Positives = 104/221 (47%)
Query: 214 SH--AECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 271
SH ++C S DG + +S S+D + + W+ +G + F+ H VL +
Sbjct: 63 SHIVSDCV-ISSDGAYALSASWDKTLRL-WELATGTTTR--------RFVGHTNDVLSVS 112
Query: 272 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRL-ERAHSEGVTSLVFSRDGSQ--ILSTSFD 328
FS D+ + SGS+D IK+W G C + E+ HSE V+ + FS + I+S+ +D
Sbjct: 113 FSADNRQIVSGSRDRSIKLWNTL-GDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWD 171
Query: 329 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
++ L S KL + GH+ Y+N + DGS + D T +WDL + L +
Sbjct: 172 KLVKVWELSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYS-- 229
Query: 389 PPPPLRGGDASVNSVHLFPKNPDHIVVCNKT-SSIYIMTLQ 428
L D +H +P+ +C T SSI I L+
Sbjct: 230 ----LNAND----EIHALVFSPNRYWLCAATASSIIIFDLE 262
Score = 172 (65.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 60/240 (25%), Positives = 102/240 (42%)
Query: 263 HDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSR 317
H+ V + S ++ ML S S+D + +W + + +R + HS V+ V S
Sbjct: 14 HNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVISS 73
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
DG+ LS S+D T R+ L +G + F GH++ V F+ D ++V+ S D ++K+W+
Sbjct: 74 DGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWN 133
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 437
DC T +G V+ V P NP + V+ + + + K +
Sbjct: 134 TLG-DCKYTITE----KGHSEWVSCVRFSP-NPQNPVIVSSGWDKLVKVWELSSCKLQTD 187
Query: 438 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI-GVTHHPHR 496
G +SP G G+D + K HL ++ D I + P+R
Sbjct: 188 HIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESK--HLYSLNANDEIHALVFSPNR 245
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 59/213 (27%), Positives = 95/213 (44%)
Query: 306 HSEGVTSLVFSRDG-SQILSTSFDSTARIHGLKS-----GKLLKEFRGHSSYVNDAIFTN 359
H+ VTSL S + + +LS+S D T I L G + +GHS V+D + ++
Sbjct: 14 HNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVISS 73
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 419
DG+ ++AS D T+++W+L + + F G V SV F + IV ++
Sbjct: 74 DGAYALSASWDKTLRLWELATGTTTRRFV------GHTNDVLSVS-FSADNRQIVSGSRD 126
Query: 420 SSIYIMTLQGQVVKSFSS-GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 478
SI + G + + G E V +P+ I G D+ + + S KL+
Sbjct: 127 RSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQT 186
Query: 479 LMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H + VT P +L A+ G+D T LW
Sbjct: 187 DHIGHTGYINTVTISPDGSLCASGGKDGTTMLW 219
Score = 117 (46.2 bits), Expect = 0.00047, P = 0.00047
Identities = 50/181 (27%), Positives = 82/181 (45%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
K H+E C RFSP+ Q +VS +D ++V W+ S KL+ D + H +
Sbjct: 145 KGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKV-WELSSCKLQTD--------HIGHTGYI 195
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
+ S D + ASG +DG +W + + L L A+ E + +LVFS + + + +
Sbjct: 196 NTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLN-ANDE-IHALVFSPNRYWLCAATA 253
Query: 328 DSTARIHGLKSGKL--LK-EFR--GHSSYVNDAI---FTNDGSRVVTASSDCTVKVWDLK 379
S K K+ LK EF G S + I ++ DG + +D ++ W +
Sbjct: 254 SSIIIFDLEKKSKVDELKPEFAAVGKKSREPECISLAWSADGQTLFAGYTDNIIRAWGVM 313
Query: 380 S 380
S
Sbjct: 314 S 314
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 215 (80.7 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 63/209 (30%), Positives = 106/209 (50%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLK 249
A + +DVE++ T+ S + +S C FSPDG+FL + + D I + WD + K+
Sbjct: 425 AELAKDVENLN-TSSSPSSDLYIRS--VC--FSPDGKFLATGAEDRLIRI-WDIENRKIV 478
Query: 250 KDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG 309
LQ H++ + +++ + L SGS D +++W +R+GQC L + +G
Sbjct: 479 MILQG--------HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC--SLTLSIEDG 528
Query: 310 VTSLVFSR-DGSQILSTSFDSTARIHGLKSGKLLKEF-------RGHSSYVNDAIFTNDG 361
VT++ S DG I + S D R+ ++G L++ GH V +FT DG
Sbjct: 529 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG 588
Query: 362 SRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
VV+ S D +VK+W+L++ + K P
Sbjct: 589 QSVVSGSLDRSVKLWNLQNANNKSDSKTP 617
Score = 204 (76.9 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 72/285 (25%), Positives = 126/285 (44%)
Query: 245 SGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLER 304
+ +L KD++ + D + + FS D + LA+G++D I++W I + + + L+
Sbjct: 424 AAELAKDVENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ- 482
Query: 305 AHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRV 364
H + + SL + G +++S S D T RI L++G+ A+ DG +
Sbjct: 483 GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYI 542
Query: 365 VTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA-SVNSVHLFPKNPDHIVVCNKTSSIY 423
S D V+VWD ++ ++ G SV SV +F ++ +V + S+
Sbjct: 543 AAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV-VFTRDGQSVVSGSLDRSVK 601
Query: 424 IMTLQGQVVKSFSSGKREG-------G--DFVAACVSPKG-EWIYCVGEDRNLYCFSHQS 473
+ LQ KS S G G DFV + + + E+I +DR + + +S
Sbjct: 602 LWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS 661
Query: 474 GKLEHLMKVHEKDVIGVTHH------PHRNLLATYGEDCTMKLWK 512
G +++ H VI V P N+ AT DC ++WK
Sbjct: 662 GNPLLMLQGHRNSVISVAVANGSPLGPEYNVFATGSGDCKARIWK 706
Score = 143 (55.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 68/273 (24%), Positives = 118/273 (43%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE-----RAHSEGVT--SLVF 315
H V C++FS D E LA+G +V+R+ G + RL H +T +
Sbjct: 343 HTSVVCCVKFSNDGEYLATGCNK-TTQVYRVSDGSLVARLSDDSAANNHRNSITENNTTT 401
Query: 316 SRDGSQILSTS---FDSTARIHGLKSGKLLKEFRGHSS-----YVNDAIFTNDGSRVVTA 367
S D + + +T+ +TA + K ++ SS Y+ F+ DG + T
Sbjct: 402 STDNNTMTTTTTTTITTTAMTSAAELAKDVENLNTSSSPSSDLYIRSVCFSPDGKFLATG 461
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL 427
+ D +++WD+++ + L+G + + S+ FP D +V + ++ I L
Sbjct: 462 AEDRLIRIWDIENRKIVMI------LQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDL 514
Query: 428 Q-GQVVKSFSSGKREGGDFVAACVSP-KGEWIYCVGEDRNLYCFSHQSGKL-EHLMKVHE 484
+ GQ S + +G VA VSP G++I DR + + ++G L E L +E
Sbjct: 515 RTGQC--SLTLSIEDGVTTVA--VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE 570
Query: 485 -----KD-VIGVTHHPHRNLLATYGEDCTMKLW 511
KD V V + + D ++KLW
Sbjct: 571 SGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 603
Score = 122 (48.0 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 59/296 (19%), Positives = 124/296 (41%)
Query: 218 CARFSPDGQFLVS-CSFDGFIEVVWD-YLSGKLKKDLQYQADETFMMHDETVLCIEFSRD 275
C +FS DG++L + C+ + V D L +L D + + T S D
Sbjct: 349 CVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANNHRNSITENNTTT----STD 404
Query: 276 SEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG-------VTSLVFSRDGSQILSTSFD 328
+ + + + + + + +E ++ + S+ FS DG + + + D
Sbjct: 405 NNTMTTTTTTTITTTAMTSAAELAKDVENLNTSSSPSSDLYIRSVCFSPDGKFLATGAED 464
Query: 329 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
RI +++ K++ +GH + + G ++V+ S D TV++WDL++ C T
Sbjct: 465 RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 524
Query: 389 PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREG-G--D 444
+ G V +V + P + +I + ++ + + G +V+ S G G D
Sbjct: 525 ----IEDG---VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD 577
Query: 445 FVAACVSPK-GEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 499
V + V + G+ + DR++ ++ Q+ + K VT+ H++ +
Sbjct: 578 SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFV 633
Score = 57 (25.1 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 25/105 (23%), Positives = 49/105 (46%)
Query: 20 ENSLQQTFQTLQNE-CQVS--LNT--VDSIETFVADINS--GRWDAILPQVAQLKLPRNK 72
+N L + ++ E QVS NT + + + + +N I V +L+L K
Sbjct: 9 QNKLNELLDAIRQEFLQVSQEANTYRLQNQKDYDFKMNQQLAEMQQIRNTVYELELTHRK 68
Query: 73 LEDLYEQIVLEM-IELRELDTARAILRQTQAMGVMKQEQPERYLR 116
++D YE+ + + + L + D A L Q +Q+Q +++L+
Sbjct: 69 MKDAYEEEIKHLKLGLEQRDHQIASLTVQQQRQQQQQQQVQQHLQ 113
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 220 (82.5 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 79/258 (30%), Positives = 117/258 (45%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F H + V ++FS +++ LASGS D + VW ++ R H + VT + FS G
Sbjct: 15 FKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFA-GHKDAVTCVNFSPSG 73
Query: 320 SQILSTSFDSTARIH--GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ S S D T RI +K + FR H++ V F +DG VTAS D TVKVW
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTVKVW- 130
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPD-HIVVC---NKTSSIYIMTLQGQVVK 433
ST Q F L +N V +PD ++V +KT ++ T + + V
Sbjct: 131 --STH-RQKF-----LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR-ECVH 181
Query: 434 SFSSGKREGGDFVAAC-VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 492
S+ E G FV P G I G D + + ++ +L ++H V ++
Sbjct: 182 SYC----EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF 237
Query: 493 HPHRNLLATYGEDCTMKL 510
HP N L T D T+K+
Sbjct: 238 HPSGNYLVTASSDSTLKI 255
Score = 218 (81.8 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 63/253 (24%), Positives = 107/253 (42%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F H + V C+ FS +LASGS+D +++W + + + + RAH+ V S+ F DG
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
++ S D T ++ K L H ++V A F+ DG +V+AS D TVK+WD
Sbjct: 116 QSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 380 STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGK 439
S +C+ ++ GG V V P I +++ + ++ + +
Sbjct: 176 SRECVHSYCE----HGG--FVTYVDFHPSGTC-IAAAGMDNTVKVWDVRTH--RLLQHYQ 226
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 499
A P G ++ D L G+L + + H+ V
Sbjct: 227 LHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYF 286
Query: 500 ATYGEDCTMKLWK 512
A+ G D + +WK
Sbjct: 287 ASGGSDEQVMVWK 299
Score = 202 (76.2 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 48/159 (30%), Positives = 78/159 (49%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE 277
CA+FSPDG+ +VS S D +++ WD K ++ + ++ H V ++F
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKL-WD----KTSRECVH----SYCEHGGFVTYVDFHPSGT 200
Query: 278 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 337
+A+ D +KVW +R+ + L+ + HS V +L F G+ +++ S DST +I L
Sbjct: 201 CIAAAGMDNTVKVWDVRTHRLLQHYQ-LHSAAVNALSFHPSGNYLVTASSDSTLKILDLM 259
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
G+LL GH F+ G + SD V VW
Sbjct: 260 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 189 (71.6 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 60/234 (25%), Positives = 99/234 (42%)
Query: 199 MYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADE 258
M P T ++ G K C FSP G L S S D + + + G+
Sbjct: 48 MKPQTRAYRFA-GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE---------ST 97
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
F H TV + F D + + S D +KVW + L L + H V FS D
Sbjct: 98 VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQ-HINWVRCAKFSPD 156
Query: 319 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
G I+S S D T ++ S + + + H +V F G+ + A D TVKVWD+
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Query: 379 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 432
++ LQ ++ L A+VN++ P + + ++ + ++G+++
Sbjct: 217 RTHRLLQHYQ----LHS--AAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLL 264
Score = 155 (59.6 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 56/214 (26%), Positives = 88/214 (41%)
Query: 299 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
L R + H + VTS+ FS + Q+ S S DS + +K F GH V F+
Sbjct: 11 LERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFS 70
Query: 359 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 418
G + + S D TV++W + + T R A+V SVH F + V +
Sbjct: 71 PSGHLLASGSRDKTVRIW-VPNVKGESTV-----FRAHTATVRSVH-FCSDGQSFVTASD 123
Query: 419 TSSIYIMTLQGQVVKSFSSGKREGGDFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 477
++ + + Q F + ++V A SP G I +D+ + + S +
Sbjct: 124 DKTVKVWSTHRQ---KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECV 180
Query: 478 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H H V V HP +A G D T+K+W
Sbjct: 181 HSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 214 (80.4 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 65/215 (30%), Positives = 105/215 (48%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S ++DG + + WD +G + F+ H + VL + FS D+ + S
Sbjct: 72 SSDGQFALSGAWDGTLRL-WDLTTGLTTR--------RFVGHTKDVLSVAFSADNRQIVS 122
Query: 282 GSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W G C ++ H+E V+ + FS + S I+S +D ++ L +
Sbjct: 123 GSRDKTIKLWNTL-GVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLAN 181
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
KL GH+ Y+N + DGS + D +WDL L T L GD
Sbjct: 182 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDSGDV 235
Query: 399 SVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 432
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 -INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 277 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 332
+M+ S S+D I +W++ + +R + HS V+ +V S DG LS ++D T R
Sbjct: 29 DMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLR 88
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
+ L +G + F GH+ V F+ D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGV-CKYTIQD--- 144
Query: 393 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 451
G V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -EGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 509
P G G+D + GK HL + DVI + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDSGDVINALCFSPNRYWLCAATGP--SIK 257
Query: 510 LW 511
+W
Sbjct: 258 IW 259
Score = 153 (58.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 67/244 (27%), Positives = 112/244 (45%)
Query: 223 PDGQFLVSCSFDGFIEVVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLA 280
PD ++S S D I ++W KL +D Y + + H V + S D +
Sbjct: 28 PD--MILSASRDKSI-IMW-----KLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFAL 79
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSG 339
SG+ DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L
Sbjct: 80 SGAWDGTLRLWDLTTGLTTRRFV-GHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVC 138
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
K + GH+ +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 139 KYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNL--ANC----KLKTNHIGHT 192
Query: 398 ASVNSVHLFPKNPDHIVVCN--KTSSIYIMTL-QGQVVKSFSSGKREGGDFV-AACVSPK 453
+N+V + +PD + + K + L +G+ + + SG D + A C SP
Sbjct: 193 GYLNTVTV---SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSG-----DVINALCFSPN 244
Query: 454 GEWI 457
W+
Sbjct: 245 RYWL 248
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 206 (77.6 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 41/115 (35%), Positives = 65/115 (56%)
Query: 269 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 328
C++F +S LA+GS D +++W + G +R L H V +L FS +G + S D
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSTQQGNSVR-LFTGHRGPVLALAFSPNGKYLASAGED 489
Query: 329 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
++ L SG L KE RGH+ + F+ D S + +AS D +V+VWD+++T C
Sbjct: 490 QRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYC 544
Score = 167 (63.8 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 56/212 (26%), Positives = 98/212 (46%)
Query: 301 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 360
++ R H V S F D S +LS S D + R L+S ++GH+ V D +
Sbjct: 336 KILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPC 395
Query: 361 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 420
+AS D T ++W T L+ + G V+ V P N +++ +
Sbjct: 396 SLYFASASHDRTARLWSFDRTYPLRIYA------GHLLDVDCVKFHP-NSNYLATGSTDK 448
Query: 421 SIYIM-TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 479
++ + T QG V+ F+ G R G +A SP G+++ GED+ L + SG L
Sbjct: 449 TVRLWSTQQGNSVRLFT-GHR--GPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKE 505
Query: 480 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
++ H ++ +T P +L+A+ D ++++W
Sbjct: 506 LRGHTDNITSLTFSPDSSLIASASMDNSVRVW 537
Score = 159 (61.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 37/122 (30%), Positives = 63/122 (51%)
Query: 217 ECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDS 276
+C +F P+ +L + S D + + W G + F H VL + FS +
Sbjct: 430 DCVKFHPNSNYLATGSTDKTVRL-WSTQQGNSVR--------LFTGHRGPVLALAFSPNG 480
Query: 277 EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL 336
+ LAS +D ++K+W + SG + L R H++ +TSL FS D S I S S D++ R+ +
Sbjct: 481 KYLASAGEDQRLKLWDLASGTLYKEL-RGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
Query: 337 KS 338
++
Sbjct: 540 RN 541
Score = 139 (54.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 57/244 (23%), Positives = 106/244 (43%)
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
E S +S++LA+G + +K+W +RS + L+ H V+ + + D IL +
Sbjct: 275 EISPNSKLLAAGFDNSCVKLWSLRSKK-LK--SEPHLVDVSRIRLACD---ILDEEEEED 328
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS-TDCLQTFKP 389
+G +K RGH V F +D S +++ S D +++ WDL+S T+ +
Sbjct: 329 D-----SAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGH 383
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 449
P+ D ++ L+ + H ++T+ ++ +++ G C
Sbjct: 384 AYPV--WDLDISPCSLYFASASH----DRTARLWSFD------RTYPLRIYAGHLLDVDC 431
Query: 450 VS--PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCT 507
V P ++ D+ + +S Q G L H V+ + P+ LA+ GED
Sbjct: 432 VKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQR 491
Query: 508 MKLW 511
+KLW
Sbjct: 492 LKLW 495
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 46/161 (28%), Positives = 68/161 (42%)
Query: 220 RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 279
RF D L+SCS D I WD S + YQ H V ++ S S
Sbjct: 349 RFLSDSSGLLSCSEDMSIRY-WDLRS--FTNTVLYQG------HAYPVWDLDISPCSLYF 399
Query: 280 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 339
AS S D ++W LR + H V + F + + + + S D T R+ + G
Sbjct: 400 ASASHDRTARLWSFDRTYPLR-IYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQG 458
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
++ F GH V F+ +G + +A D +K+WDL S
Sbjct: 459 NSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLAS 499
Score = 128 (50.1 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSP+G++L S D +++ WD SG L K+L+ H + + + FS DS ++A
Sbjct: 476 FSPNGKYLASAGEDQRLKL-WDLASGTLYKELRG--------HTDNITSLTFSPDSSLIA 526
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSE 308
S S D ++VW IR+ C + + SE
Sbjct: 527 SASMDNSVRVWDIRNTYCNAPADGSSSE 554
Score = 62 (26.9 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 24/88 (27%), Positives = 39/88 (44%)
Query: 172 QHQGLLPPGTQFDLFRGTAAMK--QD----VEDMYP--TTLSHTIKFGTKSHAECARFSP 223
+ GL P + + AA++ QD V+D P TT+ + T+ A SP
Sbjct: 219 ESNGLEPSEVPASILQNEAALELLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISP 278
Query: 224 DGQFLVSCSFDGFIEVVWDYLSGKLKKD 251
+ + L++ FD +W S KLK +
Sbjct: 279 NSK-LLAAGFDNSCVKLWSLRSKKLKSE 305
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 226 (84.6 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 71/241 (29%), Positives = 120/241 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSPDG++LV+ + D I++ WD + K++ Y F H++ + ++FS + +
Sbjct: 368 FSPDGKYLVTGTEDRQIKL-WDLSTQKVR----Y----VFSGHEQDIYSLDFSHNGRFIV 418
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
SGS D ++W + +GQC+ +LE + GVT++ S + I S D R+ + SG
Sbjct: 419 SGSGDRTARLWDVETGQCILKLEIEN--GVTAIAISPNDQFIAVGSLDQIIRVWSV-SGT 475
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC--LQTFKPPPPLR---- 394
L++ GH V F+ D S +++ S D T+KVW+L++T L KP +
Sbjct: 476 LVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYT 535
Query: 395 GGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPK 453
G V SV + P + + +K S+ LQ GQ S+ + + ++ C SP
Sbjct: 536 GHTDFVLSVAVSPDSRWGLSG-SKDRSMQFWDLQTGQ---SYLTCQGHKNSVISVCFSPD 591
Query: 454 G 454
G
Sbjct: 592 G 592
Score = 160 (61.4 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 53/183 (28%), Positives = 83/183 (45%)
Query: 208 IKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
+K ++ SP+ QF+ S D I V W +SG L + L+ H E+V
Sbjct: 438 LKLEIENGVTAIAISPNDQFIAVGSLDQIIRV-WS-VSGTLVERLEG--------HKESV 487
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRS------------GQCLRRLERAHSEGVTSLVF 315
I FS DS +L SGS D IKVW +++ G C + H++ V S+
Sbjct: 488 YSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGIC-KATYTGHTDFVLSVAV 546
Query: 316 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 375
S D LS S D + + L++G+ +GH + V F+ DG + + S D ++
Sbjct: 547 SPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARI 606
Query: 376 WDL 378
W +
Sbjct: 607 WSI 609
Score = 156 (60.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 51/242 (21%), Positives = 109/242 (45%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG-----VTSLVFSR 317
H V C++FS + + LA+G V+ +++G+ L L + V ++ FS
Sbjct: 312 HPSVVCCVKFSNNGKYLATGCNQAA-NVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSP 370
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
DG +++ + D ++ L + K+ F GH + F+++G +V+ S D T ++WD
Sbjct: 371 DGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWD 430
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 437
+++ C+ + + G V ++ + P N I V + I + ++ G +V+
Sbjct: 431 VETGQCILKLE----IENG---VTAIAISP-NDQFIAVGSLDQIIRVWSVSGTLVERLE- 481
Query: 438 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 497
G +E +A SP + D+ + + Q+ + L + + + T+ H +
Sbjct: 482 GHKESVYSIA--FSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTD 539
Query: 498 LL 499
+
Sbjct: 540 FV 541
Score = 132 (51.5 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 54/215 (25%), Positives = 95/215 (44%)
Query: 306 HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSS------YVNDAIFTN 359
H V + FS +G + L+T + A + +++GK L S YV F+
Sbjct: 312 HPSVVCCVKFSNNG-KYLATGCNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSP 370
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 419
DG +VT + D +K+WDL + F G + + S+ F N IV +
Sbjct: 371 DGKYLVTGTEDRQIKLWDLSTQKVRYVFS------GHEQDIYSLD-FSHNGRFIVSGSGD 423
Query: 420 SSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLE 477
+ + ++ GQ + E G A +SP ++I VG D+ + +S SG L
Sbjct: 424 RTARLWDVETGQCILKLEI---ENG-VTAIAISPNDQFI-AVGSLDQIIRVWS-VSGTLV 477
Query: 478 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
++ H++ V + P ++L + D T+K+W+
Sbjct: 478 ERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWE 512
Score = 41 (19.5 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 59 ILPQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGV 105
I Q+ +++ R ++D+YE+ + E E D + + R+ + +GV
Sbjct: 43 IQSQIQEIEAFRKTVDDMYEK-QKSIRETYEKDINK-LKRELEELGV 87
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 217 (81.4 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 65/256 (25%), Positives = 112/256 (43%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F H + V C+ FS +LASGS+D +++W + + + + RAH+ V S+ F DG
Sbjct: 19 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDG 77
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
++ S D T ++ K L H ++V A F+ DG +V+AS D TVK+WD
Sbjct: 78 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 137
Query: 380 STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKSFS-- 436
S +C+ ++ GG V V P I +++ + ++ ++++ +
Sbjct: 138 SRECVHSYCE----HGG--FVTYVDFHPSGTC-IAAAGMDNTVKVWDVRTHRLLQHYQLH 190
Query: 437 SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 496
S G F P G ++ D L G+L + + H+ V
Sbjct: 191 SAAVNGLSF-----HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTG 245
Query: 497 NLLATYGEDCTMKLWK 512
A+ G D + +WK
Sbjct: 246 EYFASGGSDEQVMVWK 261
Score = 203 (76.5 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 57/197 (28%), Positives = 90/197 (45%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE 277
CA+FSPDG+ +VS S D +++ WD K ++ + ++ H V ++F
Sbjct: 112 CAKFSPDGRLIVSASDDKTVKL-WD----KSSRECVH----SYCEHGGFVTYVDFHPSGT 162
Query: 278 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 337
+A+ D +KVW +R+ + L+ + HS V L F G+ +++ S DST +I L
Sbjct: 163 CIAAAGMDNTVKVWDVRTHRLLQHYQ-LHSAAVNGLSFHPSGNYLITASSDSTLKILDLM 221
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW--DLKSTDCLQTFKPP-PPLR 394
G+LL GH F+ G + SD V VW + D + K P PP
Sbjct: 222 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDHGEVTKVPRPPAT 281
Query: 395 GGDASVNSVHL-FPKNP 410
+ N + FP P
Sbjct: 282 LASSMGNLPEVDFPVPP 298
Score = 188 (71.2 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 60/229 (26%), Positives = 96/229 (41%)
Query: 205 SHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMH 263
S +F G K C FSP G L S S D + + + G+ F H
Sbjct: 14 SRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE---------STVFRAH 64
Query: 264 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
TV + F D + + S D +KVW + L L + H V FS DG I+
Sbjct: 65 TATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ-HINWVRCAKFSPDGRLIV 123
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
S S D T ++ S + + + H +V F G+ + A D TVKVWD+++
Sbjct: 124 SASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRL 183
Query: 384 LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 432
LQ ++ L A+VN + P I + ++ + ++G+++
Sbjct: 184 LQHYQ----LHS--AAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLL 226
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 214 (80.4 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 66/216 (30%), Positives = 105/216 (48%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+DG + + WD +G ++ F+ H + VL + FS D+ + S
Sbjct: 72 SSDGQFALSGSWDGELRL-WDLATG--------ESTRRFVGHTKDVLSVAFSTDNRQIVS 122
Query: 282 GSQDGKIKVWRIRSGQCLRRLERA--HSEGVTSLVFSRDG--SQILSTSFDSTARIHGLK 337
S+D IK+W G+C + A H E V+ + FS + I+S S+D T ++ L+
Sbjct: 123 ASRDRTIKLWNTL-GECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ 181
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
+ KL GHS Y+N + DGS + D + +WDL L + L G
Sbjct: 182 NCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYS------LEAG- 234
Query: 398 ASVNSVHLFPKNPDHIVVCNKT-SSIYIMTLQGQVV 432
S+ +H +P+ +C T +SI I L+ + V
Sbjct: 235 -SI--IHSLCFSPNRYWLCAATENSIRIWDLESKSV 267
Score = 184 (69.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 68/262 (25%), Positives = 114/262 (43%)
Query: 259 TFMMHDETVLCIEFSRD-SEMLASGSQDGKIKVWRIRS-----GQCLRRLERAHSEGVTS 312
T H + V I D S+++ + S+D I +W++ G RR+ HS V
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMT-GHSHFVQD 68
Query: 313 LVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCT 372
+V S DG LS S+D R+ L +G+ + F GH+ V F+ D ++V+AS D T
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRT 128
Query: 373 VKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN--PDHIVVCNKTSSIYIMTLQGQ 430
+K+W+ +C T G V+ V P P IV + ++ + LQ
Sbjct: 129 IKLWNTLG-ECKYTISEAD---GHKEWVSCVRFSPNTLVPT-IVSASWDKTVKVWNLQNC 183
Query: 431 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI-G 489
+++ +G G VSP G G+D + + GK L + +I
Sbjct: 184 KLRNTLAG--HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--KLYSLEAGSIIHS 239
Query: 490 VTHHPHRNLLATYGEDCTMKLW 511
+ P+R L E+ ++++W
Sbjct: 240 LCFSPNRYWLCAATEN-SIRIW 260
Score = 146 (56.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 48/170 (28%), Positives = 84/170 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM-- 278
FS D + +VS S D I++ W+ L G+ K + +AD H E V C+ FS ++ +
Sbjct: 113 FSTDNRQIVSASRDRTIKL-WNTL-GECKYTIS-EADG----HKEWVSCVRFSPNTLVPT 165
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 338
+ S S D +KVW +++ + LR HS + ++ S DGS S D + L
Sbjct: 166 IVSASWDKTVKVWNLQNCK-LRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAE 224
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
GK L S ++ F+ + + A+ + ++++WDL+S ++ K
Sbjct: 225 GKKLYSLEA-GSIIHSLCFSPNRYWLCAATEN-SIRIWDLESKSVVEDLK 272
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 56/226 (24%), Positives = 101/226 (44%)
Query: 296 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSF-DSTARIHGL----KS-GKLLKEFRGHS 349
G L+ AH++ VT++ D S ++ TS D + + L KS G + GHS
Sbjct: 4 GLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHS 63
Query: 350 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN 409
+V D + ++DG ++ S D +++WDL + + + F G V SV F +
Sbjct: 64 HFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFV------GHTKDVLSV-AFSTD 116
Query: 410 PDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV--SPKG--EWIYCVGEDRN 465
IV ++ +I + G+ ++ + +G +CV SP I D+
Sbjct: 117 NRQIVSASRDRTIKLWNTLGEC--KYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKT 174
Query: 466 LYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ ++ Q+ KL + + H + V P +L A+ G+D + LW
Sbjct: 175 VKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLW 220
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 199 (75.1 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 51/143 (35%), Positives = 73/143 (51%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G S E R + + +V+ S G I V WD + K+ + T M H + +
Sbjct: 65 GHTSPVESVRLNTPEELIVAGSQSGSIRV-WDLEAAKILR--------TLMGHKANICSL 115
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 116 DFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHT 174
Query: 331 ARIHGLKSGKLLKEFRGHSSYVN 353
++ L +GK++ EF GH+ VN
Sbjct: 175 VKLWDLTAGKMMSEFPGHTGPVN 197
Score = 173 (66.0 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 44/145 (30%), Positives = 69/145 (47%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H V + + E++ +GSQ G I+VW + + + LR L H + SL F G +
Sbjct: 66 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL-MGHKANICSLDFHPYGEFV 124
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
S S D+ ++ ++ + +RGHS V F+ DG + +A+ D TVK+WDL +
Sbjct: 125 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 184
Query: 383 CLQTFKPPPPLRGGDASVNSVHLFP 407
+ F P G VN V P
Sbjct: 185 MMSEF-P-----GHTGPVNVVEFHP 203
Score = 145 (56.1 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 33/134 (24%), Positives = 63/134 (47%)
Query: 256 ADETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV 314
A E + H V + + S +LA+G D ++ +W I C+ L H+ V S+
Sbjct: 16 AVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVR 74
Query: 315 FSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
+ I++ S + R+ L++ K+L+ GH + + F G V + S D +K
Sbjct: 75 LNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIK 134
Query: 375 VWDLKSTDCLQTFK 388
+WD++ C+ ++
Sbjct: 135 LWDIRRKGCVFRYR 148
Score = 131 (51.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 43/198 (21%), Positives = 83/198 (41%)
Query: 305 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 363
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 22 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 81
Query: 364 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 423
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 82 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 134
Query: 424 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 481
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 135 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 190
Query: 482 VHEKDVIGVTHHPHRNLL 499
H V V HP+ LL
Sbjct: 191 GHTGPVNVVEFHPNEYLL 208
Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 39/172 (22%), Positives = 73/172 (42%)
Query: 342 LKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 400
++E H+S V+ + R++ T DC V +W + +C+ + L G + V
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTGHTSPV 70
Query: 401 NSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYC 459
SV L P+ ++V S SI + L+ + G + + + P GE++
Sbjct: 71 ESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYGEFVAS 126
Query: 460 VGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 127 GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 178
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 219 (82.2 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 83/326 (25%), Positives = 144/326 (44%)
Query: 192 MKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKD 251
M +ED P L + K G K+ A FSP+ + + + S+D F+ ++W LK
Sbjct: 1 MASGLED--PI-LERSFK-GHKAAITSADFSPNCKQIATASWDTFL-MLWS-----LKPH 50
Query: 252 LQ-YQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRI-RSGQCLRRLERAHSEG 309
+ Y+ ++ H + V ++FS +LAS S+D +++W + R G+ +AH+
Sbjct: 51 ARAYR----YVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEF--KAHTAP 104
Query: 310 VTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS 369
V S+ FS DG +++ S D + ++ + + L H+ +V A F+ DG +V+ S
Sbjct: 105 VRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 370 DCTVKVWDLKSTDCLQTFKPPPPLRGG-DASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ 428
D T+K+WD + C+ F D + N + DH V K I + L
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAV---KIWDIRMNKLL 221
Query: 429 GQVVKSFSSGKREGGDFVAACVS--PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKD 486
Q + S G C+S P G + D + G+L + ++ H
Sbjct: 222 -QHYQVHSCGVN--------CLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGP 272
Query: 487 VIGVTHHPHRNLLATYGEDCTMKLWK 512
V V+ LL + G D + +W+
Sbjct: 273 VFTVSFSKDGELLTSGGADAQVLIWR 298
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 214 (80.4 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 67/250 (26%), Positives = 116/250 (46%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ 321
H V ++F+ ++ASGS D +I +WR+ G C + + H + L ++ DGSQ
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-GDCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 322 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR-VVTASSDCTVKVWDLKS 380
I+S S D T R +++GK +K+ HSS+VN T G +++ S D T K+WD++
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQ 170
Query: 381 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 439
+QTF P + + +V F D I + + + L+ G+ + G
Sbjct: 171 RGAIQTF--PDKYQ-----ITAVS-FSDAADKIFTGGVDNDVKVWDLRKGEATMTLE-GH 221
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS-GKLEHLMKVHEKDVIGVTHHPHRNL 498
++ +SP G ++ G D L + + +K+ E G H+ +NL
Sbjct: 222 QD--TITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFE----GHQHNFEKNL 275
Query: 499 L-ATYGEDCT 507
L ++ D T
Sbjct: 276 LKCSWSPDGT 285
Score = 169 (64.5 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 67/299 (22%), Positives = 122/299 (40%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G S +F+P G + S S D I +W + G K + + H +L +
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREI-FLWR-VHGDCKNFMVLKG------HKNAILDL 102
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ-ILSTSFDS 329
++ D + S S D ++ W + +G+ ++++ HS V S +R G I+S S D
Sbjct: 103 HWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAE-HSSFVNSCCPTRRGPPLIISGSDDG 161
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAI-FTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
TA++ ++ ++ F Y A+ F++ ++ T D VKVWDL+ + T +
Sbjct: 162 TAKLWDMRQRGAIQTFP--DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLE 219
Query: 389 P-PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVA 447
+ G S + +L D+ +C Y Q + VK F + +
Sbjct: 220 GHQDTITGMSLSPDGSYLLTNGMDN-KLCVWDMRPYAP--QNRCVKIFEGHQHNFEKNLL 276
Query: 448 ACV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
C SP G + DR ++ + S + + + H V HP ++ + D
Sbjct: 277 KCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSD 335
Score = 166 (63.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 45/166 (27%), Positives = 79/166 (47%)
Query: 267 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS 326
+ + FS ++ + +G D +KVW +R G+ LE H + +T + S DGS +L+
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLE-GHQDTITGMSLSPDGSYLLTNG 241
Query: 327 FDSTARIHGLK----SGKLLKEFRGHS-SYVNDAI---FTNDGSRVVTASSDCTVKVWDL 378
D+ + ++ + +K F GH ++ + + ++ DG++V SSD V +WD
Sbjct: 242 MDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDT 301
Query: 379 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYI 424
S + +K P G SVN P P I C+ +IY+
Sbjct: 302 TSRRTI--YKLP----GHTGSVNECVFHPTEPI-IGSCSSDKNIYL 340
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 55/212 (25%), Positives = 101/212 (47%)
Query: 306 HSEGVTSLVFSRDGSQILSTSFDSTA---RIHG-LKSGKLLKEFRGHSSYVNDAIFTNDG 361
H V ++ F+ G+ I S S D R+HG K+ +LK GH + + D +T+DG
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLK---GHKNAILDLHWTSDG 108
Query: 362 SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK--T 419
S++V+AS D TV+ WD+ +T K + + VNS + P I+ + T
Sbjct: 109 SQIVSASPDKTVRAWDV------ETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGT 162
Query: 420 SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 479
+ ++ M +G +++F K + A S + I+ G D ++ + + G+
Sbjct: 163 AKLWDMRQRG-AIQTFPD-KYQ---ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMT 217
Query: 480 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
++ H+ + G++ P + L T G D + +W
Sbjct: 218 LEGHQDTITGMSLSPDGSYLLTNGMDNKLCVW 249
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 221 (82.9 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 59/165 (35%), Positives = 88/165 (53%)
Query: 224 DGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 283
+ L + S+D I++ WD +G+ +L+ T H+ + C++F D L SGS
Sbjct: 358 EDNILATGSYDTTIKI-WDTETGE---ELR-----TLRGHESGIRCLQF--DDTKLISGS 406
Query: 284 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLK 343
D IKVW R+G+C+ H GV L F D S + S S D T +I + K
Sbjct: 407 MDRTIKVWNWRTGECISTYT-GHRGGVIGLHF--DASILASGSVDKTVKIWNFED-KSTF 462
Query: 344 EFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTF 387
RGH+ +VN A+ + SR V +AS DCTV++WDL + C++TF
Sbjct: 463 SLRGHTDWVN-AVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTF 506
Score = 185 (70.2 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 49/148 (33%), Positives = 78/148 (52%)
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
+TF H V+C++F + +LA+GS D IK+W +G+ LR L R H G+ L F
Sbjct: 343 KTFKGHTNGVMCLQF--EDNILATGSYDTTIKIWDTETGEELRTL-RGHESGIRCLQF-- 397
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
D ++++S S D T ++ ++G+ + + GH V F D S + + S D TVK+W+
Sbjct: 398 DDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF--DASILASGSVDKTVKIWN 455
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHL 405
+ TF LRG VN+V +
Sbjct: 456 FEDKS---TFS----LRGHTDWVNAVRV 476
Score = 139 (54.0 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 31/98 (31%), Positives = 57/98 (58%)
Query: 291 WRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDSTARIHGLKSGKLLKEFRGHS 349
W+ G+C + + H+ GV L F IL+T S+D+T +I ++G+ L+ RGH
Sbjct: 335 WKY--GRCSIKTFKGHTNGVMCLQFE---DNILATGSYDTTIKIWDTETGEELRTLRGHE 389
Query: 350 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
S + F D +++++ S D T+KVW+ ++ +C+ T+
Sbjct: 390 SGIRCLQF--DDTKLISGSMDRTIKVWNWRTGECISTY 425
Score = 131 (51.2 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 73/312 (23%), Positives = 122/312 (39%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G +S C +F D L+S S D I+V W++ +G + T+ H V+ +
Sbjct: 387 GHESGIRCLQF--DDTKLISGSMDRTIKV-WNWRTG--------ECISTYTGHRGGVIGL 435
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
F D+ +LASGS D +K+W R H++ V ++ + S S D T
Sbjct: 436 HF--DASILASGSVDKTVKIWNFEDKSTFSL--RGHTDWVNAVRVDTSSRTVFSASDDCT 491
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAI-----FTNDGSRVVTASSDCTVKVWDLK--STDC 383
R+ L + ++ F GH V + F + + D + D S
Sbjct: 492 VRLWDLDTKTCIRTFHGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTSGDADPPSIQA 551
Query: 384 LQTFKPPPPLRGGDA---SVNSVHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVKSFSSGK 439
+P A S ++ P P ++V S+I + T G+ +++F G
Sbjct: 552 SMGLEPNAAYSQSSAFGTSFDNGRAAP--PRYMVTSALDSTIRLWETTTGRCLRTFF-GH 608
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 499
EG + A I EDR + + ++GK E H V + R
Sbjct: 609 LEGVWALGADTLR----IVSGAEDRMIKIWDPRTGKCERTFTGHSGPVTCIGLGDSR--F 662
Query: 500 ATYGEDCTMKLW 511
AT EDC ++++
Sbjct: 663 ATGSEDCEVRMY 674
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 34/102 (33%), Positives = 53/102 (51%)
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 338
+ + + D I++W +G+CLR H EGV +L D +I+S + D +I ++
Sbjct: 582 MVTSALDSTIRLWETTTGRCLRTFF-GHLEGVWAL--GADTLRIVSGAEDRMIKIWDPRT 638
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
GK + F GHS V I D SR T S DC V+++ +S
Sbjct: 639 GKCERTFTGHSGPVT-CIGLGD-SRFATGSEDCEVRMYSFQS 678
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 218 (81.8 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 77/307 (25%), Positives = 135/307 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQ-YQADETFMMHDETVLC 269
G K+ A FSP+ + + + S+D F+ ++W LK + Y+ ++ H + V
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFL-MLWS-----LKPHARAYR----YVGHKDVVTS 65
Query: 270 IEFSRDSEMLASGSQDGKIKVWRI-RSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 328
++FS +LAS S+D +++W + R G+ +AH+ V S+ FS DG +++ S D
Sbjct: 66 LQFSPQGNLLASASRDKTVRLWVLDRKGKSSEF--KAHTAPVRSVDFSADGQFLVTASED 123
Query: 329 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
+ ++ + + L H+ +V A F+ DG +V+ S D T+K+WD S C+ F
Sbjct: 124 KSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFS 183
Query: 389 PPPPLRGG-DASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVA 447
D S N + DH V + I + L Q + S G
Sbjct: 184 DSVGFANFVDFSPNGTCIASAGSDHAV---RIWDIRMNRLL-QHYQVHSCGVN------- 232
Query: 448 ACVS--PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
C+S P G + D + G+L + ++ H V V+ L + G D
Sbjct: 233 -CLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGAD 291
Query: 506 CTMKLWK 512
+ +W+
Sbjct: 292 AQVLVWR 298
Score = 207 (77.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 76/255 (29%), Positives = 115/255 (45%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F H + +FS + + +A+ S D + +W ++ R H + VTSL FS G
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-GHKDVVTSLQFSPQG 72
Query: 320 SQILSTSFDSTARIHGL-KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
+ + S S D T R+ L + GK EF+ H++ V F+ DG +VTAS D ++KVW +
Sbjct: 73 NLLASASRDKTVRLWVLDRKGKS-SEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSM 131
Query: 379 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH--IVVCNKTSSIYIM-TLQGQVVKSF 435
Q F L + V +PD IV C++ +I I T Q V +F
Sbjct: 132 YR----QRF-----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNF 182
Query: 436 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 495
S +FV SP G I G D + + + +L +VH V ++ HP
Sbjct: 183 SDSVGFA-NFVD--FSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPS 239
Query: 496 RNLLATYGEDCTMKL 510
N L T D T+K+
Sbjct: 240 GNSLVTASSDGTVKI 254
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 54/217 (24%), Positives = 89/217 (41%)
Query: 299 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
L R + H +TS FS + QI + S+D+ + LK + GH V F+
Sbjct: 10 LERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFS 69
Query: 359 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 418
G+ + +AS D TV++W L FK A V SV F + +V ++
Sbjct: 70 PQGNLLASASRDKTVRLWVLDRKGKSSEFK------AHTAPVRSVD-FSADGQFLVTASE 122
Query: 419 TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 478
SI + ++ Q + S R A SP G I ED+ + + S + +
Sbjct: 123 DKSIKVWSMYRQ--RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVN 180
Query: 479 LMKVHEKDVIG----VTHHPHRNLLATYGEDCTMKLW 511
+ D +G V P+ +A+ G D +++W
Sbjct: 181 ----NFSDSVGFANFVDFSPNGTCIASAGSDHAVRIW 213
>ZFIN|ZDB-GENE-060803-1 [details] [associations]
symbol:ahi1 "Abelson helper integration site 1"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007368 "determination of left/right symmetry" evidence=IMP]
[GO:0044458 "motile cilium assembly" evidence=IMP] Pfam:PF00018
InterPro:IPR017986 InterPro:IPR001452 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PRINTS:PR00452 PROSITE:PS50002
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00326
ZFIN:ZDB-GENE-060803-1 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF50044 GO:GO:0007368
GO:GO:0044458 GeneTree:ENSGT00530000063479 EMBL:CR407704
EMBL:BX248131 IPI:IPI01024108 Ensembl:ENSDART00000148403
ArrayExpress:F8W3V6 Bgee:F8W3V6 Uniprot:F8W3V6
Length = 1193
Score = 224 (83.9 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 76/310 (24%), Positives = 142/310 (45%)
Query: 221 FSPDGQFLVS-CSF-DGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 278
FS DG+ L + C+ D F ++++ SGK+ +++D LC +SRD +
Sbjct: 554 FSHDGRALAAACADRDAFPIIIYEIPSGKVLSSFNGHLS---VVYD---LC--WSRDDKG 605
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS-FDSTARIHGLK 337
L + S DG ++VW + Q L H V F +++T +D R+ +
Sbjct: 606 LLTASSDGTVRVWNVERLQTLAHKTLPHPSFVYCAKFHPQAQSLVATGGYDGVLRVWNVD 665
Query: 338 ----SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK-----STDCLQTFK 388
+G+LL+EF GH +++N F +GSR+ +A + + VW K +
Sbjct: 666 VQDVNGQLLQEFDGHKTFINTLCFDPEGSRMFSADNSGLIIVWGTKVMPGSRRGATSQWS 725
Query: 389 PPPPLRGGDA---SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDF 445
++ D S+NS+ + P N +++ K S + +M L+ VK + G D
Sbjct: 726 IEREIKEADLNGISINSLEVHP-NGRRLLIHAKDSVLRVMDLRILAVKKYI-GATNYRDR 783
Query: 446 VAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK--VHEKDVIGVTHHPHRNLLA--T 501
+ + +P G +I+ ED Y ++ ++G + + + V HPH N++A
Sbjct: 784 INSTFTPCGSFIFAGSEDGLAYVWNSETGDQVAVYSELCYSSALRAVAFHPHENMVAFCC 843
Query: 502 YGEDCTMKLW 511
+G++ + L+
Sbjct: 844 FGQNQPIHLY 853
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 33/92 (35%), Positives = 47/92 (51%)
Query: 304 RAHSEGVTSLVFSRDGSQILSTSFDSTAR---IHGLKSGKLLKEFRGHSSYVNDAIFTND 360
R G +L FS DG + + D A I+ + SGK+L F GH S V D ++ D
Sbjct: 543 RGGQMGCFTLCFSHDGRALAAACADRDAFPIIIYEIPSGKVLSSFNGHLSVVYDLCWSRD 602
Query: 361 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
++TASSD TV+VW+++ L P P
Sbjct: 603 DKGLLTASSDGTVRVWNVERLQTLAHKTLPHP 634
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 211 (79.3 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 68/235 (28%), Positives = 108/235 (45%)
Query: 214 SH-AECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEF 272
SH E S DGQF +S S+DG + + WD +G+ + F+ H + VL + F
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWDGELRL-WDLATGETTR--------RFVGHTKDVLSVAF 113
Query: 273 SRDSEMLASGSQDGKIKVWRIRSGQCLRRLERA--HSEGVTSLVFSRDG--SQILSTSFD 328
S D+ + S S+D IK+W G+C + H E V+ + FS + I+S S+D
Sbjct: 114 STDNRQIVSASRDRTIKLWNTL-GECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWD 172
Query: 329 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
T ++ L++ KL GHS Y+N + DGS + D + +WDL L + +
Sbjct: 173 KTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Query: 389 PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGG 443
+ S N L + I + + S + L+ + KS + K EGG
Sbjct: 233 AGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDL-KS-EAEKNEGG 285
Score = 180 (68.4 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 68/258 (26%), Positives = 112/258 (43%)
Query: 263 HDETVLCIEFSRD-SEMLASGSQDGKIKVWRIRS-----GQCLRRLERAHSEGVTSLVFS 316
H + V I D S+++ + S+D I +W++ G RRL HS V +V S
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLT-GHSHFVEDVVLS 72
Query: 317 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
DG LS S+D R+ L +G+ + F GH+ V F+ D ++V+AS D T+K+W
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 377 DLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN--PDHIVVCNKTSSIYIMTLQGQVVKS 434
+ +C T G V+ V P P IV + ++ + LQ +++
Sbjct: 133 NTLG-ECKYTISEGD---GHKEWVSCVRFSPNTLVPT-IVSASWDKTVKVWNLQNCKLRN 187
Query: 435 FSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI-GVTHH 493
G G VSP G G+D + + GK L + +I +
Sbjct: 188 SLVG--HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--KLYSLEAGSIIHSLCFS 243
Query: 494 PHRNLLATYGEDCTMKLW 511
P+R L E+ ++++W
Sbjct: 244 PNRYWLCAATEN-SIRIW 260
Score = 144 (55.7 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 60/226 (26%), Positives = 103/226 (45%)
Query: 296 GQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDSTARIHGL----KS-GKLLKEFRGHS 349
G L+ + RAH++ VT++ D S I+ T S D + + L KS G + GHS
Sbjct: 4 GLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHS 63
Query: 350 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN 409
+V D + ++DG ++ S D +++WDL + + + F G V SV F +
Sbjct: 64 HFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFV------GHTKDVLSV-AFSTD 116
Query: 410 PDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV--SPKG--EWIYCVGEDRN 465
IV ++ +I + G+ + S G +G +CV SP I D+
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEG--DGHKEWVSCVRFSPNTLVPTIVSASWDKT 174
Query: 466 LYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ ++ Q+ KL + + H + V P +L A+ G+D + LW
Sbjct: 175 VKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLW 220
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 155 (59.6 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 283 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 342
S D IK+W + +C+R + H V+S+ +G I+S S D T ++ +++G +
Sbjct: 1 SADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV 59
Query: 343 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
K F GH +V DG+ + + S+D TV+VW + + +C
Sbjct: 60 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC 100
Score = 130 (50.8 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 33/129 (25%), Positives = 65/129 (50%)
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
+TF H E V + ++D ++AS S D ++VW + + +C L R H V + ++
Sbjct: 60 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL-REHEHVVECISWAP 118
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ +S+ S + G + G H ++V +F + G +++ + D T++VWD
Sbjct: 119 E------SSYSSISEATGSEVG--------HDNWVRGVLFHSGGKFILSCADDKTLRVWD 164
Query: 378 LKSTDCLQT 386
K+ C++T
Sbjct: 165 YKNKRCMKT 173
Score = 119 (46.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 251 DLQ-YQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG 309
D Q ++ T HD V + + + + S S+D IK+W +++G C++ H E
Sbjct: 10 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREW 68
Query: 310 VTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYV 352
V + ++DG+ I S S D T R+ + + + E R H V
Sbjct: 69 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 111
Score = 114 (45.2 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL 427
S+D T+K+WD + +C++T + G D +V+SV + P N DHIV ++ +I + +
Sbjct: 1 SADMTIKLWDFQGFECIRT------MHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEV 53
Query: 428 Q-GQVVKSFSSGKRE 441
Q G VK+F+ G RE
Sbjct: 54 QTGYCVKTFT-GHRE 67
Score = 113 (44.8 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 26/77 (33%), Positives = 36/77 (46%)
Query: 303 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS 362
E H V ++F G ILS + D T R+ K+ + +K H +V F
Sbjct: 132 EVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP 191
Query: 363 RVVTASSDCTVKVWDLK 379
VVT S D TVKVW+ +
Sbjct: 192 YVVTGSVDQTVKVWECR 208
Score = 97 (39.2 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 17/62 (27%), Positives = 35/62 (56%)
Query: 326 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 385
S D T ++ + + ++ GH V+ +G +V+AS D T+K+W++++ C++
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 386 TF 387
TF
Sbjct: 61 TF 62
Score = 62 (26.9 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 454 GEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
G++I +D+ L + +++ + + HE V + H + T D T+K+W+
Sbjct: 148 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 206
Score = 57 (25.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 26/104 (25%), Positives = 44/104 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLSG 246
+A + M+ + +K T H E R + DG + SCS D + V W +
Sbjct: 41 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRV-WVVATK 98
Query: 247 KLKKDLQYQADETFMMHDETVLCIEFSRDSEML----ASGSQDG 286
+ K +L+ H+ V CI ++ +S A+GS+ G
Sbjct: 99 ECKAELRE--------HEHVVECISWAPESSYSSISEATGSEVG 134
Score = 44 (20.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 483 HEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H+ V GV H + + +D T+++W
Sbjct: 135 HDNWVRGVLFHSGGKFILSCADDKTLRVW 163
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 215 (80.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 83/306 (27%), Positives = 131/306 (42%)
Query: 215 HAECA---RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 271
HAE FSPDG L S S D + + WD L + + T H + VLC+
Sbjct: 118 HAEAVVSLNFSPDGAHLASGSGDTTVRL-WD-----LNTETPHF---TCTGHKQWVLCVS 168
Query: 272 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV---FSRDGS--QILSTS 326
++ D + LASG + G I +W +GQ R H + + L + RD ++ S S
Sbjct: 169 WAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASAS 228
Query: 327 FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 386
D RI +K G+ L GH++ V A+ + T+S D TVK+W +T
Sbjct: 229 GDGDCRIWDVKLGQCLMNIAGHTNAVT-AVRWGGAGLIYTSSKDRTVKMWRAADGILCRT 287
Query: 387 FKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFV 446
F A +++ ++ P H V S + + T + Q S+ KR +
Sbjct: 288 FSGHAHWVNNIA-LSTDYVLRTGPFHPVKDRSKSHLSLSTEELQE----SALKR----YQ 338
Query: 447 AACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDC 506
A C + C +D LY + + K M H+ V V + P L+A+ D
Sbjct: 339 AVCPDEVESLVSC-SDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDK 397
Query: 507 TMKLWK 512
+++LW+
Sbjct: 398 SVRLWR 403
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 48/155 (30%), Positives = 80/155 (51%)
Query: 223 PDG-QFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
PD + LVSCS D + +W ++ Q + E H V +++S D +++AS
Sbjct: 342 PDEVESLVSCSDDNTL-YLW--------RNNQNKCVERMTGHQNVVNDVKYSPDVKLIAS 392
Query: 282 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 341
S D +++WR GQ + R H + V ++ +S D I+S S DST ++ +++ KL
Sbjct: 393 ASFDKSVRLWRASDGQYMATF-RGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKL 451
Query: 342 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
+E GH+ V + DGSRV + D +K+W
Sbjct: 452 AQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 178 (67.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 77/316 (24%), Positives = 134/316 (42%)
Query: 202 TTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFM 261
T H G K C ++PDG+ L S G I ++WD +G+ Q
Sbjct: 150 TETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSI-IIWDPETGQ-------QKGRPLS 201
Query: 262 MHDETVLCIE---FSRDSEM--LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 316
H + + C+ + RD E LAS S DG ++W ++ GQCL + H+ VT++ +
Sbjct: 202 GHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIA-GHTNAVTAVRWG 260
Query: 317 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
G I ++S D T ++ G L + F GH+ +VN+ + D V+ VK
Sbjct: 261 GAGL-IYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTD--YVLRTGPFHPVKDR 317
Query: 377 DLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVKSF 435
KS L T + L+ A + P + +V C+ +++Y+ Q + V+
Sbjct: 318 S-KSHLSLSTEE----LQES-ALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERM 371
Query: 436 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 495
+ + D SP + I D+++ + G+ + H + V V
Sbjct: 372 TGHQNVVNDVK---YSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSAD 428
Query: 496 RNLLATYGEDCTMKLW 511
L+ + +D T+K+W
Sbjct: 429 SRLIVSGSKDSTLKVW 444
Score = 157 (60.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 277 EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL 336
E L S S D + +WR +C+ R+ H V + +S D I S SFD + R+
Sbjct: 346 ESLVSCSDDNTLYLWRNNQNKCVERMT-GHQNVVNDVKYSPDVKLIASASFDKSVRLWRA 404
Query: 337 KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 385
G+ + FRGH V ++ D +V+ S D T+KVW +++ Q
Sbjct: 405 SDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQ 453
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 208 (78.3 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 71/263 (26%), Positives = 120/263 (45%)
Query: 259 TFMMHDETVLCIEFS-RDSEMLASGSQDGKIKVWRIRS------GQCLRRLERAHSEGVT 311
T + H+ V I + +D + + S S+D + VW++ G +RL HS ++
Sbjct: 10 TLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLY-GHSHFIS 68
Query: 312 SLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDC 371
+V S DG+ LS S+D T R+ L +GK + F GH+ V F+ D ++V+ S D
Sbjct: 69 DVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDK 128
Query: 372 TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQ 430
T+K+W+ + +C T + G V+ V P + + I+V C ++ + L
Sbjct: 129 TIKLWNTLA-ECKFTIQED----GHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANC 183
Query: 431 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG- 489
+K+ G G VSP G G+D + GK +L + D+I
Sbjct: 184 KLKNNHHG--HNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGK--NLYTLEHNDIINA 239
Query: 490 VTHHPHRN-LLATYGEDCTMKLW 511
+ P+R L YG ++K+W
Sbjct: 240 LCFSPNRYWLCVAYGP--SIKIW 260
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/171 (26%), Positives = 79/171 (46%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS--RDSEM 278
FS D + +VS S D I++ W+ L+ + K +Q H + V C+ FS + +
Sbjct: 114 FSADNRQIVSGSRDKTIKL-WNTLA-ECKFTIQEDG------HTDWVSCVRFSPNHSNPI 165
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 338
+ S D +KVW + + + L+ H+ + ++ S DGS S DS A + L
Sbjct: 166 IVSCGWDRTVKVWNLANCK-LKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLND 224
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
GK L H+ +N F+ + + A ++K+WDL ++ +P
Sbjct: 225 GKNLYTLE-HNDIINALCFSPNRYWLCVAYGP-SIKIWDLACKKTVEELRP 273
Score = 128 (50.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 46/179 (25%), Positives = 81/179 (45%)
Query: 211 GTKSHAECARFSPD--GQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVL 268
G C RFSP+ +VSC +D ++V W+ + KLK + + H+ +
Sbjct: 147 GHTDWVSCVRFSPNHSNPIIVSCGWDRTVKV-WNLANCKLKNN--HHG------HNGYLN 197
Query: 269 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 328
+ S D + SG +D K +W + G+ L LE H++ + +L FS + L ++
Sbjct: 198 TVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE--HNDIINALCFSPN-RYWLCVAYG 254
Query: 329 STARIHGLKSGKLLKEFRGHS-SYVNDA--------IFTNDGSRVVTASSDCTVKVWDL 378
+ +I L K ++E R S + A ++ DG + SD T++VW +
Sbjct: 255 PSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 313
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 221 (82.9 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 89/306 (29%), Positives = 139/306 (45%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 278
A FS D Q + SC D ++V + SG+ + L+ A HD+ +LC FS D +
Sbjct: 620 ACFSRDRQRIASCGADKTLQV-FKAESGE--RLLEISA------HDDEILCCTFSADDKY 670
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS-RDGSQILSTSFDST-ARIHGL 336
+A+ S D K+K+W R+G+CL E H+E V F+ R G +L+T D T ++ L
Sbjct: 671 VATCSADKKVKIWNSRTGKCLYVYEE-HTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDL 729
Query: 337 KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGG 396
K GH + V+ F+ + + + S+D TVK+W++ S + L+T + R
Sbjct: 730 KDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNA 789
Query: 397 DASVNSVHLFPK------NPDHIVVC--NKTSSIYIMT--LQGQVVKSFSSGKREGGDFV 446
D + V + K + D I+V NK + T L QV+ S S + DF
Sbjct: 790 DEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHS-TIQYCDFC 848
Query: 447 AACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDC 506
A +C E N+ S + H VH VT +L T ED
Sbjct: 849 AGDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVH-----CVTFSSDGSLFLTSSEDQ 903
Query: 507 TMKLWK 512
T+++W+
Sbjct: 904 TIRIWE 909
Score = 189 (71.6 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 55/191 (28%), Positives = 89/191 (46%)
Query: 213 KSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMM--HDETVLCI 270
++ + RF+ D Q L+S + D I+V W++ Q +E + H E +
Sbjct: 1005 RTSVQHCRFTTDCQTLISSAHDAVIQV-WNW-----------QLNECVFLKGHKEAIKDF 1052
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
F +S++L S S DG +KVW I +G+ + H V S S DGS+ STS D T
Sbjct: 1053 AFLENSKLL-SWSFDGTVKVWNITTGKTEKDFA-CHRGAVLSCAVSPDGSRFSSTSADKT 1110
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ----- 385
A+I +S +L E +GH + V + F+ + T +++WD+ + + L
Sbjct: 1111 AKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSV 1170
Query: 386 TFKPPPPLRGG 396
T P GG
Sbjct: 1171 TVDEEEPTHGG 1181
Score = 188 (71.2 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 60/243 (24%), Positives = 123/243 (50%)
Query: 195 DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWD-YLSGKLK---- 249
D++D Y +T+ FG + RFSP+ ++ SCS DG +++ W+ + + +L+
Sbjct: 728 DLKDKY---CRNTM-FGHVNAVSHCRFSPNDDYIASCSTDGTVKL-WNVHSANELRTIEI 782
Query: 250 KDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG 309
KD ADE + V C +SR S+ + +++ K+ ++ + + L ++ +H
Sbjct: 783 KDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKN-KLLLFDVTTSNLLTQVIISHHST 841
Query: 310 VTSLVFSRDGSQILSTSFDSTA-RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 368
+ F G ++++ + + + +KS + + RGH+S+V+ F++DGS +T+S
Sbjct: 842 IQYCDFCA-GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSS 900
Query: 369 SDCTVKVWDL----KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN-KTSSIY 423
D T+++W+ KS+D + + G+ + +++ N HI + N T SI
Sbjct: 901 EDQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIY----NQKHIQLINGNTDSII 956
Query: 424 IMT 426
+ T
Sbjct: 957 MQT 959
Score = 182 (69.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 55/192 (28%), Positives = 88/192 (45%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE 277
C S D +F +G I+V+ L G++ + A T + H C F+ D +
Sbjct: 968 CCCLSEDLKFAAFGQENGAIKVL-RLLDGRVLTSRE--AYRTSVQH-----C-RFTTDCQ 1018
Query: 278 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 337
L S + D I+VW + +C+ + H E + F + S++LS SFD T ++ +
Sbjct: 1019 TLISSAHDAVIQVWNWQLNECV--FLKGHKEAIKDFAFL-ENSKLLSWSFDGTVKVWNIT 1075
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
+GK K+F H V + DGSR + S+D T K+W +S+ L L+G +
Sbjct: 1076 TGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHE------LKGHE 1129
Query: 398 ASVNSVHLFPKN 409
A V P N
Sbjct: 1130 ACVRCSAFSPSN 1141
Score = 180 (68.4 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 72/284 (25%), Positives = 116/284 (40%)
Query: 243 YLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL 302
YL KK L+ + H + V FSRD + +AS D ++V++ SG+ L +
Sbjct: 593 YLEWINKKSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEI 652
Query: 303 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS 362
AH + + FS D + + S D +I ++GK L + H+ VN F N
Sbjct: 653 S-AHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRG 711
Query: 363 R--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSV-HL-FPKNPDHIVVCNK 418
+ + T S D +K+WDLK C T + G VN+V H F N D+I C+
Sbjct: 712 QYLLATCSDDTYIKLWDLKDKYCRNT------MFG---HVNAVSHCRFSPNDDYIASCST 762
Query: 419 TSSIYIMTLQGQ------VVKSFSSGKREGGDFVAACV-----SPKGEWIYCVGEDRNLY 467
++ + + +K F E D V V S + I V +++ L
Sbjct: 763 DGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLL 822
Query: 468 CFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
S L ++ H + L+A C+++LW
Sbjct: 823 FDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSHCSIELW 866
Score = 168 (64.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 66/225 (29%), Positives = 101/225 (44%)
Query: 213 KSHAECAR-FS-PDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
K H E + F+ + L+S SFDG ++V W+ +GK +KD F H VL
Sbjct: 1043 KGHKEAIKDFAFLENSKLLSWSFDGTVKV-WNITTGKTEKD--------FACHRGAVLSC 1093
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS- 329
S D +S S D K+W S L L + H V FS +++L+T D
Sbjct: 1094 AVSPDGSRFSSTSADKTAKIWSFESSSVLHEL-KGHEACVRCSAFS-PSNKLLATGDDKG 1151
Query: 330 TARIHGLKSGKLL---------KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
RI + +G+LL +E H +V D F+ D +V SS +K WD+ +
Sbjct: 1152 DIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLV--SSGGYLKWWDVTT 1209
Query: 381 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM 425
+ LQTF G ++ S+H+ P N D V + +Y++
Sbjct: 1210 GESLQTF-----YTNG-TNLKSIHVSP-NFDVYVTVDNLGILYVL 1247
Score = 129 (50.5 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS--RD 275
C FS D +++ +CS D +++ W+ +GK Y +E H E V C +F+ R
Sbjct: 661 CCTFSADDKYVATCSADKKVKI-WNSRTGKCL----YVYEE----HTEQVNCCQFNNRRG 711
Query: 276 SEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHG 335
+LA+ S D IK+W ++ C R H V+ FS + I S S D T ++
Sbjct: 712 QYLLATCSDDTYIKLWDLKDKYC-RNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWN 770
Query: 336 LKSGKLLK 343
+ S L+
Sbjct: 771 VHSANELR 778
Score = 123 (48.4 bits), Expect = 0.00074, P = 0.00074
Identities = 31/115 (26%), Positives = 59/115 (51%)
Query: 264 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
+ + C S D + A G ++G IKV R+ G+ L E A+ V F+ D ++
Sbjct: 963 ESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSRE-AYRTSVQHCRFTTDCQTLI 1021
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
S++ D+ ++ + + + +GH + D F + S++++ S D TVKVW++
Sbjct: 1022 SSAHDAVIQVWNWQLNECVF-LKGHKEAIKDFAFL-ENSKLLSWSFDGTVKVWNI 1074
Score = 113 (44.8 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 40/177 (22%), Positives = 78/177 (44%)
Query: 336 LKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRG 395
L G++L + + V FT D +++++ D ++VW+ + +C+ F L+G
Sbjct: 992 LLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECV--F-----LKG 1044
Query: 396 GDASVNSVHLFPKNPDHIVVC-NKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 454
++ F +N + + T ++ +T G+ K F+ + G ++ VSP G
Sbjct: 1045 HKEAIKDF-AFLENSKLLSWSFDGTVKVWNITT-GKTEKDFACHR---GAVLSCAVSPDG 1099
Query: 455 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
D+ +S +S + H +K HE V P LLAT + +++W
Sbjct: 1100 SRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIW 1156
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 221 (82.9 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 89/306 (29%), Positives = 139/306 (45%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 278
A FS D Q + SC D ++V + SG+ + L+ A HD+ +LC FS D +
Sbjct: 621 ACFSRDRQRIASCGADKTLQV-FKAESGE--RLLEISA------HDDEILCCTFSADDKY 671
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS-RDGSQILSTSFDST-ARIHGL 336
+A+ S D K+K+W R+G+CL E H+E V F+ R G +L+T D T ++ L
Sbjct: 672 VATCSADKKVKIWNSRTGKCLYVYEE-HTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDL 730
Query: 337 KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGG 396
K GH + V+ F+ + + + S+D TVK+W++ S + L+T + R
Sbjct: 731 KDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNA 790
Query: 397 DASVNSVHLFPK------NPDHIVVC--NKTSSIYIMT--LQGQVVKSFSSGKREGGDFV 446
D + V + K + D I+V NK + T L QV+ S S + DF
Sbjct: 791 DEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHS-TIQYCDFC 849
Query: 447 AACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDC 506
A +C E N+ S + H VH VT +L T ED
Sbjct: 850 AGDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVH-----CVTFSSDGSLFLTSSEDQ 904
Query: 507 TMKLWK 512
T+++W+
Sbjct: 905 TIRIWE 910
Score = 189 (71.6 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 55/191 (28%), Positives = 89/191 (46%)
Query: 213 KSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMM--HDETVLCI 270
++ + RF+ D Q L+S + D I+V W++ Q +E + H E +
Sbjct: 1006 RTSVQHCRFTTDCQTLISSAHDAVIQV-WNW-----------QLNECVFLKGHKEAIKDF 1053
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
F +S++L S S DG +KVW I +G+ + H V S S DGS+ STS D T
Sbjct: 1054 AFLENSKLL-SWSFDGTVKVWNITTGKTEKDFA-CHRGAVLSCAVSPDGSRFSSTSADKT 1111
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ----- 385
A+I +S +L E +GH + V + F+ + T +++WD+ + + L
Sbjct: 1112 AKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSV 1171
Query: 386 TFKPPPPLRGG 396
T P GG
Sbjct: 1172 TVDEEEPTHGG 1182
Score = 188 (71.2 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 60/243 (24%), Positives = 123/243 (50%)
Query: 195 DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWD-YLSGKLK---- 249
D++D Y +T+ FG + RFSP+ ++ SCS DG +++ W+ + + +L+
Sbjct: 729 DLKDKY---CRNTM-FGHVNAVSHCRFSPNDDYIASCSTDGTVKL-WNVHSANELRTIEI 783
Query: 250 KDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG 309
KD ADE + V C +SR S+ + +++ K+ ++ + + L ++ +H
Sbjct: 784 KDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKN-KLLLFDVTTSNLLTQVIISHHST 842
Query: 310 VTSLVFSRDGSQILSTSFDSTA-RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 368
+ F G ++++ + + + +KS + + RGH+S+V+ F++DGS +T+S
Sbjct: 843 IQYCDFCA-GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSS 901
Query: 369 SDCTVKVWDL----KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN-KTSSIY 423
D T+++W+ KS+D + + G+ + +++ N HI + N T SI
Sbjct: 902 EDQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIY----NQKHIQLINGNTDSII 957
Query: 424 IMT 426
+ T
Sbjct: 958 MQT 960
Score = 182 (69.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 55/192 (28%), Positives = 88/192 (45%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE 277
C S D +F +G I+V+ L G++ + A T + H C F+ D +
Sbjct: 969 CCCLSEDLKFAAFGQENGAIKVL-RLLDGRVLTSRE--AYRTSVQH-----C-RFTTDCQ 1019
Query: 278 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 337
L S + D I+VW + +C+ + H E + F + S++LS SFD T ++ +
Sbjct: 1020 TLISSAHDAVIQVWNWQLNECV--FLKGHKEAIKDFAFL-ENSKLLSWSFDGTVKVWNIT 1076
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
+GK K+F H V + DGSR + S+D T K+W +S+ L L+G +
Sbjct: 1077 TGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHE------LKGHE 1130
Query: 398 ASVNSVHLFPKN 409
A V P N
Sbjct: 1131 ACVRCSAFSPSN 1142
Score = 180 (68.4 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 72/284 (25%), Positives = 116/284 (40%)
Query: 243 YLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL 302
YL KK L+ + H + V FSRD + +AS D ++V++ SG+ L +
Sbjct: 594 YLEWINKKSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEI 653
Query: 303 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS 362
AH + + FS D + + S D +I ++GK L + H+ VN F N
Sbjct: 654 S-AHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRG 712
Query: 363 R--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSV-HL-FPKNPDHIVVCNK 418
+ + T S D +K+WDLK C T + G VN+V H F N D+I C+
Sbjct: 713 QYLLATCSDDTYIKLWDLKDKYCRNT------MFG---HVNAVSHCRFSPNDDYIASCST 763
Query: 419 TSSIYIMTLQGQ------VVKSFSSGKREGGDFVAACV-----SPKGEWIYCVGEDRNLY 467
++ + + +K F E D V V S + I V +++ L
Sbjct: 764 DGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLL 823
Query: 468 CFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
S L ++ H + L+A C+++LW
Sbjct: 824 FDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSHCSIELW 867
Score = 169 (64.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 66/227 (29%), Positives = 102/227 (44%)
Query: 213 KSHAECAR-FS-PDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
K H E + F+ + L+S SFDG ++V W+ +GK +KD F H VL
Sbjct: 1044 KGHKEAIKDFAFLENSKLLSWSFDGTVKV-WNITTGKTEKD--------FACHRGAVLSC 1094
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS- 329
S D +S S D K+W S L L + H V FS +++L+T D
Sbjct: 1095 AVSPDGSRFSSTSADKTAKIWSFESSSVLHEL-KGHEACVRCSAFS-PSNKLLATGDDKG 1152
Query: 330 TARIHGLKSGKLL---------KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
RI + +G+LL +E H +V D F+ D +V SS +K WD+ +
Sbjct: 1153 DIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLV--SSGGYLKWWDVTT 1210
Query: 381 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL 427
+ LQTF G ++ S+H+ P N D V + +Y++ +
Sbjct: 1211 GESLQTF-----YTNG-TNLKSIHVSP-NFDVYVTVDNLGILYVLQI 1250
Score = 129 (50.5 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS--RD 275
C FS D +++ +CS D +++ W+ +GK Y +E H E V C +F+ R
Sbjct: 662 CCTFSADDKYVATCSADKKVKI-WNSRTGKCL----YVYEE----HTEQVNCCQFNNRRG 712
Query: 276 SEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHG 335
+LA+ S D IK+W ++ C R H V+ FS + I S S D T ++
Sbjct: 713 QYLLATCSDDTYIKLWDLKDKYC-RNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWN 771
Query: 336 LKSGKLLK 343
+ S L+
Sbjct: 772 VHSANELR 779
Score = 123 (48.4 bits), Expect = 0.00074, P = 0.00074
Identities = 31/115 (26%), Positives = 59/115 (51%)
Query: 264 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
+ + C S D + A G ++G IKV R+ G+ L E A+ V F+ D ++
Sbjct: 964 ESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSRE-AYRTSVQHCRFTTDCQTLI 1022
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
S++ D+ ++ + + + +GH + D F + S++++ S D TVKVW++
Sbjct: 1023 SSAHDAVIQVWNWQLNECVF-LKGHKEAIKDFAFL-ENSKLLSWSFDGTVKVWNI 1075
Score = 113 (44.8 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 40/177 (22%), Positives = 78/177 (44%)
Query: 336 LKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRG 395
L G++L + + V FT D +++++ D ++VW+ + +C+ F L+G
Sbjct: 993 LLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECV--F-----LKG 1045
Query: 396 GDASVNSVHLFPKNPDHIVVC-NKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 454
++ F +N + + T ++ +T G+ K F+ + G ++ VSP G
Sbjct: 1046 HKEAIKDF-AFLENSKLLSWSFDGTVKVWNITT-GKTEKDFACHR---GAVLSCAVSPDG 1100
Query: 455 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
D+ +S +S + H +K HE V P LLAT + +++W
Sbjct: 1101 SRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIW 1157
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 216 (81.1 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 54/174 (31%), Positives = 85/174 (48%)
Query: 225 GQFLVSCSFDGFIEVVWD---------YLSGKLKKDLQ-YQADETFMM-----HDETVLC 269
G F + + G VWD + SG + + + D T+ + H V C
Sbjct: 372 GSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDC 431
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
++F +S LA+GS D +++W + G +R L H V SL FS +G + S D
Sbjct: 432 VKFHPNSNYLATGSTDKTVRLWSAQQGNSVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQ 490
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
++ L SG L KE RGH+ + F+ D S + +AS D +V+VWD+++T C
Sbjct: 491 RLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHC 544
Score = 167 (63.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + +C +F P+ +L + S D + + W G + F H VL +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRL-WSAQQGNSVR--------LFTGHRGPVLSL 474
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
FS + + LAS +D ++K+W + SG + L R H++ +TSL FS D S I S S D++
Sbjct: 475 AFSPNGKYLASAGEDQRLKLWDLASGTLFKEL-RGHTDNITSLTFSPDSSLIASASMDNS 533
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 366
R+ +++ G SS + ++T S V++
Sbjct: 534 VRVWDIRNTHCSAPTDGSSSELV-GVYTGQMSNVLS 568
Score = 157 (60.3 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 54/209 (25%), Positives = 95/209 (45%)
Query: 304 RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 363
R H V S F D S +LS S D + R L S ++GH+ V D +
Sbjct: 339 RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLY 398
Query: 364 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 423
+ S D T ++W T L+ + G A V+ V P N +++ + ++
Sbjct: 399 FASGSHDRTARLWSFDRTYPLRIYA------GHLADVDCVKFHP-NSNYLATGSTDKTVR 451
Query: 424 IMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKV 482
+ + Q G V+ F+ G R G ++ SP G+++ GED+ L + SG L ++
Sbjct: 452 LWSAQQGNSVRLFT-GHR--GPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRG 508
Query: 483 HEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H ++ +T P +L+A+ D ++++W
Sbjct: 509 HTDNITSLTFSPDSSLIASASMDNSVRVW 537
Score = 152 (58.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 70/262 (26%), Positives = 107/262 (40%)
Query: 154 VVPPSRLMA--LIGQALK-WQ-QHQGLLPPGTQFDLFRGTAAM----KQDVEDMYPTTLS 205
+ P S+L+A +K W + + L P + D+ R A ++D ED T
Sbjct: 276 ISPESKLLAAGFDNSCIKLWSLRSKKLKPEPHRVDVSRIHLACDILEEEDDEDDDVGTEM 335
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDE 265
++ G RF D L+SCS D I WD G + YQ H
Sbjct: 336 KVLR-GHCGPVYSTRFLADSSGLLSCSEDMSIRY-WDL--GSFTNTVLYQG------HAY 385
Query: 266 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST 325
V ++ S S ASGS D ++W LR + H V + F + + + +
Sbjct: 386 PVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLR-IYAGHLADVDCVKFHPNSNYLATG 444
Query: 326 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 385
S D T R+ + G ++ F GH V F+ +G + +A D +K+WDL S
Sbjct: 445 STDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL-- 502
Query: 386 TFKPPPPLRGGDASVNSVHLFP 407
FK LRG ++ S+ P
Sbjct: 503 -FKE---LRGHTDNITSLTFSP 520
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 59/243 (24%), Positives = 107/243 (44%)
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQILSTSFDS 329
E S +S++LA+G + IK+W +RS ++L+ H V+ + + D IL D
Sbjct: 275 EISPESKLLAAGFDNSCIKLWSLRS----KKLKPEPHRVDVSRIHLACD---ILEEEDDE 327
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS-TDCLQTFK 388
+ G +K RGH V F D S +++ S D +++ WDL S T+ +
Sbjct: 328 DDDV-----GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQG 382
Query: 389 PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAA 448
P+ D ++ L+ + H ++T+ ++ + ++ ++ G D V
Sbjct: 383 HAYPV--WDVDISPYSLYFASGSH----DRTARLWSFD-RTYPLRIYA-GHLADVDCVK- 433
Query: 449 CVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTM 508
P ++ D+ + +S Q G L H V+ + P+ LA+ GED +
Sbjct: 434 -FHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRL 492
Query: 509 KLW 511
KLW
Sbjct: 493 KLW 495
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 36/107 (33%), Positives = 57/107 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSP+G++L S D +++ WD SG L K+L+ H + + + FS DS ++A
Sbjct: 476 FSPNGKYLASAGEDQRLKL-WDLASGTLFKELRG--------HTDNITSLTFSPDSSLIA 526
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
S S D ++VW IR+ C + + SE V V++ S +LS F
Sbjct: 527 SASMDNSVRVWDIRNTHCSAPTDGSSSELVG--VYTGQMSNVLSVQF 571
Score = 55 (24.4 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 23/85 (27%), Positives = 38/85 (44%)
Query: 175 GLLPPGTQFDLFRGTAAMK--QD----VEDMYP--TTLSHTIKFGTKSHAECARFSPDGQ 226
GL P + + AA++ Q+ V+D P TT+ + T+ A SP+ +
Sbjct: 222 GLEPTDMPAPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPESK 281
Query: 227 FLVSCSFDGFIEVVWDYLSGKLKKD 251
L++ FD +W S KLK +
Sbjct: 282 -LLAAGFDNSCIKLWSLRSKKLKPE 305
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 210 (79.0 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 80/308 (25%), Positives = 135/308 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G ++ C +SPD + ++S S DG + ++WD + K+ T++M C
Sbjct: 68 GHQAKVLCTDWSPDKRHIISSSQDGRL-IIWDAFT--TNKEHAVTMPTTWIM-----ACA 119
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERA---HSEGVTSLVFSRDGSQILSTSF 327
++ +A G D K+ V+ I S + + +R H+ ++ ++ QIL+ S
Sbjct: 120 -YAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSG 178
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVN--DAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 385
DST + ++SG+LL+ F GHS V D G+ V+ S D +WD++S +Q
Sbjct: 179 DSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQ 238
Query: 386 TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS--IYIMTLQGQVVKSFSSGKREGG 443
+F+ G + VNSV P D I + SS +Y M +V G
Sbjct: 239 SFE------GHQSDVNSVKFHPCG-DAIATGSDDSSCRLYDMRADREVAVFAKESIIFGV 291
Query: 444 DFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG 503
+ V VS G ++ D + + + L+ HE V V P L+T
Sbjct: 292 NSVDFSVS--GRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGTALSTGS 349
Query: 504 EDCTMKLW 511
D T+++W
Sbjct: 350 WDYTIRVW 357
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 60/223 (26%), Positives = 97/223 (43%)
Query: 198 DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
D + T H + T CA ++P G F V+C G V Y + D + A
Sbjct: 98 DAFTTNKEHAVTMPTTWIMACA-YAPSGNF-VACG--GLDNKVTVY---PITSDEEMAAK 150
Query: 258 E-TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTS--LV 314
+ T H + C + + + +GS D +W + SGQ L+ HS V + L
Sbjct: 151 KRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFH-GHSGDVMAIDLA 209
Query: 315 FSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
+ G+ +S S D A I ++SG +++ F GH S VN F G + T S D + +
Sbjct: 210 PNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCR 269
Query: 375 VWDLKSTDCLQTFKPPPPLRGG---DASVNSVHLFPKNPDHIV 414
++D+++ + F + G D SV+ LF D+ V
Sbjct: 270 LYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTV 312
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 216 (81.1 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 56/207 (27%), Positives = 102/207 (49%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 278
A+FSP G + SCS D + W +++ L+ A H V C+++ +
Sbjct: 466 AQFSPFGHYFASCSHDRTARI-WSM--DRIQP-LRIMAG-----HLSDVDCVQWHPNCNY 516
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 338
+A+GS D +++W +++G+C+R + H V SL S DG + S D T + L +
Sbjct: 517 IATGSSDKTVRLWDVQTGECVR-IFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST 575
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
+ + GH+S V ++ +GS + + S+DCTVK+WD+ S+ L + G
Sbjct: 576 ARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEK---NGNSN 632
Query: 399 SVNSVHLFP--KNPDHIVVCNKTSSIY 423
+ S+ FP P H + ++ + ++
Sbjct: 633 RLRSLRTFPTKSTPVHALRFSRRNLLF 659
Score = 180 (68.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 76/277 (27%), Positives = 122/277 (44%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR------SG----------QCL--- 299
TF+ + C S D ++A G D IKVW + SG Q +
Sbjct: 347 TFVNTHNGLNCSSISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPN 406
Query: 300 -RR---LERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 355
RR L HS V S FS G +LS+S D+T R+ K L ++GH+ V DA
Sbjct: 407 GRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDA 466
Query: 356 IFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV 415
F+ G + S D T ++W S D +Q P + G + V+ V P N ++I
Sbjct: 467 QFSPFGHYFASCSHDRTARIW---SMDRIQ---PLRIMAGHLSDVDCVQWHP-NCNYIAT 519
Query: 416 CNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSG 474
+ ++ + +Q G+ V+ F G R ++ +SP G ++ ED + + +
Sbjct: 520 GSSDKTVRLWDVQTGECVRIFI-GHRSM--VLSLAMSPDGRYMASGDEDGTIMMWDLSTA 576
Query: 475 KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ + H V +++ +LLA+ DCT+KLW
Sbjct: 577 RCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 613
Score = 142 (55.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 55/203 (27%), Positives = 88/203 (43%)
Query: 201 PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYL------SGKLK--KDL 252
P+ +T T + C+ S DG + D I+V WD SG L+ D
Sbjct: 341 PSVSFYTF-VNTHNGLNCSSISHDGSLVAGGFSDSSIKV-WDMAKIGQAGSGALQAENDS 398
Query: 253 QYQA-------DETFMM-HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLER 304
Q+ T ++ H V FS + + S S D I++W + L +
Sbjct: 399 SDQSIGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLV-CYK 457
Query: 305 AHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRV 364
H+ V FS G S S D TARI + + L+ GH S V+ + + + +
Sbjct: 458 GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYI 517
Query: 365 VTASSDCTVKVWDLKSTDCLQTF 387
T SSD TV++WD+++ +C++ F
Sbjct: 518 ATGSSDKTVRLWDVQTGECVRIF 540
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 205 (77.2 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 46/132 (34%), Positives = 72/132 (54%)
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE-GVTSLV 314
A F HD V ++FS S +LA+G D ++K+W +C + + S G+TS+
Sbjct: 314 ASYVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIE 373
Query: 315 FSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
F G+ +L+ S D +RI + +L GHS V A F D +R+V+ S D T+K
Sbjct: 374 FDSAGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLK 433
Query: 375 VWDLKSTDCLQT 386
+WDL+S C++T
Sbjct: 434 LWDLRSKVCIKT 445
Score = 182 (69.1 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 62/249 (24%), Positives = 115/249 (46%)
Query: 267 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS 326
+ IEF L + S D ++W + + LR HS V S F D ++I+S S
Sbjct: 369 ITSIEFDSAGAYLLAASNDFASRIWTVDDYR-LRHTLTGHSGKVLSAKFLLDNARIVSGS 427
Query: 327 FDSTARIHGLKSGKLLKE-FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 385
D T ++ L+S +K F G S ND + T V++ D ++ WD++S ++
Sbjct: 428 HDRTLKLWDLRSKVCIKTVFAGSSC--NDIVCTEQC--VMSGHFDKKIRFWDIRSESVVR 483
Query: 386 TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSS-GKREGG 443
+ L G + ++ L P+ + ++ C++ + ++ L+ VK +FS+ G + G
Sbjct: 484 EME----LLG---KITALDLNPERTE-LLSCSRDDLLKVIDLRTNAVKQTFSAPGFKCGS 535
Query: 444 DFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM-KVHEKDVIGVTHHPHRNLLATY 502
D+ SP G ++ + +LY +S +GK+E ++ K H + V P + +
Sbjct: 536 DWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAPSGLHVVSV 595
Query: 503 GEDCTMKLW 511
+ LW
Sbjct: 596 DKGSRAVLW 604
Score = 147 (56.8 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 62/256 (24%), Positives = 111/256 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G+ + F G +L++ S D F +W D Y+ T H VL
Sbjct: 364 GSNAGITSIEFDSAGAYLLAASND-FASRIWTV-------D-DYRLRHTLTGHSGKVLSA 414
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F D+ + SGS D +K+W +RS C++ + S +V + ++S FD
Sbjct: 415 KFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSS--CNDIVCTEQC--VMSGHFDKK 470
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTN-DGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
R ++S +++E A+ N + + +++ S D +KV DL++ QTF
Sbjct: 471 IRFWDIRSESVVREMELLGKIT--ALDLNPERTELLSCSRDDLLKVIDLRTNAVKQTFSA 528
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-LQGQVVKSFSSGKREGGDFVAA 448
P G D + V +F + ++ + S+Y+ + L G+V K S K+ A
Sbjct: 529 PGFKCGSDWT--RV-VFSPDGSYVAAGSAEGSLYVWSVLTGKVEKVLS--KQHSSSINAV 583
Query: 449 CVSPKGEWIYCVGEDR 464
+P G ++ V D+
Sbjct: 584 AWAPSG--LHVVSVDK 597
Score = 55 (24.4 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 55 RWDAILPQVAQLKLPRNKLE-DLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPER 113
RW +A+ R++L+ +E+I+L+ +L E ++L TQ + K + P R
Sbjct: 12 RWKR---HIAEELRRRDRLQRQAFEEIILQYTKLLEKSDLHSVL--TQKLQAEKHDMPNR 66
Query: 114 Y 114
+
Sbjct: 67 H 67
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 201 (75.8 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 55/179 (30%), Positives = 88/179 (49%)
Query: 209 KFGTKSH-AECAR--FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDE 265
KF H A R F P +VS S D I + WD+ +G+ ++ L+ H +
Sbjct: 101 KFSLTGHRASITRVIFHPIFALMVSASEDATIRI-WDFETGEYERSLKG--------HTD 151
Query: 266 TVLCIEFSRDSEMLASGSQDGKIKVWRIR-SGQCLRRLERAHSEGVTSLVFSRDGSQILS 324
+V + F ++LAS S D IK+W + S +C++ + H V+S+ F G +LS
Sbjct: 152 SVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMH-GHDHNVSSVAFVPAGDYVLS 210
Query: 325 TSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
S D T ++ + +G +K + GH +V +GS T S+D T++VW S DC
Sbjct: 211 ASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDC 269
Score = 157 (60.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 33/126 (26%), Positives = 65/126 (51%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H ++ + F ++ S S+D I++W +G+ R L + H++ V + F G +
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSL-KGHTDSVQDVAFDAQGKLL 165
Query: 323 LSTSFDSTARIHGLK-SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 381
S S D + ++ + S + +K GH V+ F G V++AS D T+K+W++ +
Sbjct: 166 ASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATG 225
Query: 382 DCLQTF 387
C++T+
Sbjct: 226 YCVKTY 231
Score = 153 (58.9 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 338
LASGS+D I++W + G CL L H V L F G ++S S D T R+ L++
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLTLS-GHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRN 370
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
+ +K H + F V++ S D TVKVW+ +
Sbjct: 371 KRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 135 (52.6 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 46/187 (24%), Positives = 81/187 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMM--HDETVL 268
G + F P G +++S S D I++ W+ +G K + M+ H E +
Sbjct: 191 GHDHNVSSVAFVPAGDYVLSASRDRTIKM-WEVATGYCVKTYTGHREWVRMVRVHIEGSI 249
Query: 269 CIEFSRDSEMLA--SGSQDGKIKVW-RIRSGQCLRRLERAHSEGVTSLVFS------RDG 319
S D + + S+D K+++ + +C+ A + + + G
Sbjct: 250 FATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQG 309
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
+ S S D T RI + G L GH ++V F G +V+AS D T++VWDL+
Sbjct: 310 PFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLR 369
Query: 380 STDCLQT 386
+ C++T
Sbjct: 370 NKRCMKT 376
Score = 52 (23.4 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 12/59 (20%), Positives = 26/59 (44%)
Query: 453 KGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+G ++ D+ + + G + H+ V G+ HP L + +D T+++W
Sbjct: 308 QGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
Score = 48 (22.0 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 9/61 (14%), Positives = 27/61 (44%)
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
P G+++ +D+ + + ++ + + H+ + H + + D T+K+W
Sbjct: 349 PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
Query: 512 K 512
+
Sbjct: 409 E 409
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 207 (77.9 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 73/297 (24%), Positives = 128/297 (43%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 278
++FS DG FL S +D I +W+ G+ + + H ++ ++F+ DS
Sbjct: 42 SQFSSDGSFLASAGYDQQI-FLWNVF-GECENFAVLKG------HKGAIMEVKFNADSSH 93
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL-STSFDSTARIHGLK 337
L S D ++VW + +G C+R ++H++ V S+ +R G Q++ S S D T +H ++
Sbjct: 94 LVSAGTDKTVRVWDMETGSCIRNF-KSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMR 152
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFKPP-PPLRG 395
S + K+F Y A+ ND + V+ D +KVWD+ D +
Sbjct: 153 SKEAAKKFI--CKYQQTAVTFNDAADNVICGGIDNQIKVWDMLRNDVRYVLSGHRDTITS 210
Query: 396 GDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACV-SPK 453
S N L + D C+ S I ++V + + C SP+
Sbjct: 211 LSVSHNGNFLLSNSMD----CSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSPR 266
Query: 454 GEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKL 510
+I DR +Y ++ +S + + H V HP + +L + G D T+ L
Sbjct: 267 DNYITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQILLSAGSDKTIFL 323
Score = 165 (63.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 35/127 (27%), Positives = 64/127 (50%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLR-RLERAHSEGVTSLVFSRDGSQ 321
H + +FS D LAS D +I +W + G+C + + H + + F+ D S
Sbjct: 35 HGGEIYTSQFSSDGSFLASAGYDQQIFLWNV-FGECENFAVLKGHKGAIMEVKFNADSSH 93
Query: 322 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKS 380
++S D T R+ +++G ++ F+ H+ VN G +++ +AS D TV V D++S
Sbjct: 94 LVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRS 153
Query: 381 TDCLQTF 387
+ + F
Sbjct: 154 KEAAKKF 160
Score = 152 (58.6 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 42/210 (20%), Positives = 90/210 (42%)
Query: 304 RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSSYVNDAIFTNDGS 362
+ H + + FS DGS + S +D + + + +GH + + F D S
Sbjct: 33 QGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSS 92
Query: 363 RVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSI 422
+V+A +D TV+VWD+++ C++ FK + VNSV + + P I + ++
Sbjct: 93 HLVSAGTDKTVRVWDMETGSCIRNFKSHTDI------VNSVDVNRRGPQMICSASDDGTV 146
Query: 423 YIMTLQG-QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 481
+ ++ + K F ++ A + + + C G D + + + +++
Sbjct: 147 MVHDMRSKEAAKKFICKYQQ----TAVTFNDAADNVICGGIDNQIKVWDMLRNDVRYVLS 202
Query: 482 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H + ++ + N L + DC++ W
Sbjct: 203 GHRDTITSLSVSHNGNFLLSNSMDCSLMSW 232
Score = 134 (52.2 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 46/229 (20%), Positives = 99/229 (43%)
Query: 157 PSRLMALIGQALKWQQHQGLLPPGTQFDL---FRGTAAMKQDVE--DMYPTTLSHTIKFG 211
P R +L+ + Q H G + +QF F +A Q + +++ + + G
Sbjct: 19 PKRTSSLMAPTMVLQGHGGEIYT-SQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKG 77
Query: 212 TKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 271
K +F+ D LVS D + V WD +G ++ F H + V ++
Sbjct: 78 HKGAIMEVKFNADSSHLVSAGTDKTVRV-WDMETGSCIRN--------FKSHTDIVNSVD 128
Query: 272 FSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+R +M+ S S DG + V +RS + ++ + + T++ F+ ++ D+
Sbjct: 129 VNRRGPQMICSASDDGTVMVHDMRSKEAAKKFICKYQQ--TAVTFNDAADNVICGGIDNQ 186
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
++ + + GH + +++G+ +++ S DC++ WD++
Sbjct: 187 IKVWDMLRNDVRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIR 235
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 214 (80.4 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 53/162 (32%), Positives = 79/162 (48%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
SP + S S D + W + D Y + H V C++F +S LA+
Sbjct: 389 SPHSLYFASASHDRTARL-WSF-------DRTYPL-RIYAGHLADVDCVKFHPNSNYLAT 439
Query: 282 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 341
GS D +++W + G +R L H V SL FS +G + S D ++ L SG L
Sbjct: 440 GSTDKTVRLWSTQQGNSVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 498
Query: 342 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
KE RGH+ + F+ D S V +AS D +V+VWD++S+ C
Sbjct: 499 YKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHC 540
Score = 170 (64.9 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + +C +F P+ +L + S D + + W G + F H VL +
Sbjct: 420 GHLADVDCVKFHPNSNYLATGSTDKTVRL-WSTQQGNSVR--------LFTGHRGPVLSL 470
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
FS + + LAS +D ++K+W + SG + L R H++ +TSL FS D S + S S D++
Sbjct: 471 AFSPNGKYLASAGEDQRLKLWDLASGTLYKEL-RGHTDNITSLTFSPDSSLVASASMDNS 529
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 366
R+ ++S G SS + ++T S V++
Sbjct: 530 VRVWDIRSSHCSTPADGSSSELV-GVYTGQMSNVLS 564
Score = 165 (63.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 304 RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 363
R H V S F D S +LS S D + R L S ++GH+ V D +
Sbjct: 335 RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLY 394
Query: 364 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 423
+AS D T ++W T L+ + G A V+ V P N +++ + ++
Sbjct: 395 FASASHDRTARLWSFDRTYPLRIYA------GHLADVDCVKFHP-NSNYLATGSTDKTVR 447
Query: 424 IM-TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKV 482
+ T QG V+ F+ G R G ++ SP G+++ GED+ L + SG L ++
Sbjct: 448 LWSTQQGNSVRLFT-GHR--GPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG 504
Query: 483 HEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H ++ +T P +L+A+ D ++++W
Sbjct: 505 HTDNITSLTFSPDSSLVASASMDNSVRVW 533
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSP+G++L S D +++ WD SG L K+L+ H + + + FS DS ++A
Sbjct: 472 FSPNGKYLASAGEDQRLKL-WDLASGTLYKELRG--------HTDNITSLTFSPDSSLVA 522
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
S S D ++VW IRS C + + SE V V++ S +LS F
Sbjct: 523 SASMDNSVRVWDIRSSHCSTPADGSSSELVG--VYTGQMSNVLSVQF 567
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 60/242 (24%), Positives = 105/242 (43%)
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
E S DS++LA+G + IK+W +RS + L+ H V+ + + D L D
Sbjct: 271 EVSPDSKLLAAGFDNSCIKLWSLRSKK-LK--SEPHQVDVSRIHLACD---FLEEEDDED 324
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS-TDCLQTFKP 389
+ G +K RGH V F D S +++ S D +++ WDL S T+ +
Sbjct: 325 DNL-----GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 379
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 449
P+ D S +S++ + D +T+ ++ + ++ ++ G D V
Sbjct: 380 AYPVWDLDISPHSLYFASASHD------RTARLWSFD-RTYPLRIYA-GHLADVDCVK-- 429
Query: 450 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 509
P ++ D+ + +S Q G L H V+ + P+ LA+ GED +K
Sbjct: 430 FHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLK 489
Query: 510 LW 511
LW
Sbjct: 490 LW 491
Score = 107 (42.7 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H V F DS L S S+D I+ W + S L + H+ V L S
Sbjct: 337 HCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV-LYQGHAYPVWDLDISPHSLYF 395
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
S S D TAR+ L+ + GH + V+ F + + + T S+D TV++W + +
Sbjct: 396 ASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGN 455
Query: 383 CLQTF 387
++ F
Sbjct: 456 SVRLF 460
Score = 69 (29.3 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 175 GLLPPGTQFDLFRGTAAMKQD---VEDMYP--TTLSHTIKFGTKSHAECARFSPDGQFLV 229
GL P + + AA+++ V+D P TT+ + T+ A SPD + L+
Sbjct: 221 GLEPADMPAPILQNEAALEESIKRVKDGPPSLTTIYFYAFYNTEQLLNTAEVSPDSK-LL 279
Query: 230 SCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
+ FD +W S KLK + +Q D
Sbjct: 280 AAGFDNSCIKLWSLRSKKLKSE-PHQVD 306
>MGI|MGI:1329037 [details] [associations]
symbol:Strap "serine/threonine kinase receptor associated
protein" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005102 "receptor binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1329037 EMBL:AF096285 GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005102
GO:GO:0005681 GO:GO:0000122 GO:GO:0030512
GeneTree:ENSGT00630000089849 CTD:11171 HOGENOM:HOG000174258
HOVERGEN:HBG055228 KO:K13137 OMA:LWQTTVG OrthoDB:EOG4CRM0M
ChiTaRS:STRAP EMBL:AK075804 EMBL:AK077504 EMBL:AK145971
EMBL:AK152283 IPI:IPI00918973 RefSeq:NP_035629.2 UniGene:Mm.22584
ProteinModelPortal:Q9Z1Z2 SMR:Q9Z1Z2 STRING:Q9Z1Z2
PhosphoSite:Q9Z1Z2 REPRODUCTION-2DPAGE:IPI00130670
REPRODUCTION-2DPAGE:Q9Z1Z2 PaxDb:Q9Z1Z2 PRIDE:Q9Z1Z2
Ensembl:ENSMUST00000064910 GeneID:20901 KEGG:mmu:20901
NextBio:299765 Bgee:Q9Z1Z2 Genevestigator:Q9Z1Z2
GermOnline:ENSMUSG00000030224 Uniprot:Q9Z1Z2
Length = 350
Score = 208 (78.3 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 67/255 (26%), Positives = 122/255 (47%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
TF+ H V ++D+ A+ + D KVW SG L L AH V ++ F++D
Sbjct: 54 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTL--AHKHIVKTVDFTQD 111
Query: 319 GSQILSTSFDSTARIHGLKSGKLL-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ +L+ D RI+ L + KE GH+S + A++ +D ++++A D TV++WD
Sbjct: 112 SNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSDDKQILSAD-DKTVRLWD 170
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 437
+ +++ + SV+S+ P+ + +V+ S + + + +KSF +
Sbjct: 171 HATMTEVKSLN-------FNMSVSSMEYIPEG-EILVITYGRSIAFHSAVSLEPIKSFEA 222
Query: 438 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 497
+A + P+ E++ GED LY + + SG+ K H + V P
Sbjct: 223 P----ATINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGE 278
Query: 498 LLATYGEDCTMKLWK 512
L A+ ED T++LW+
Sbjct: 279 LYASGSEDGTLRLWQ 293
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 206 (77.6 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 72/274 (26%), Positives = 124/274 (45%)
Query: 207 TIKFGTKSHAECAR---FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMH 263
T K H++ S DG F +S S+D + + WD G+ + +F+ H
Sbjct: 63 TAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRL-WDLSLGETIR--------SFIGH 113
Query: 264 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL-ERAHSEGVTSLVFSRDGSQ- 321
V + FS D+ + S S+D IK+W + QC + ++ H++ +T + FS +Q
Sbjct: 114 TSDVFSVSFSPDNRQIVSASRDKTIKLWNTLA-QCKYTITDQQHTDWITCVRFSPSPNQA 172
Query: 322 -ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
I+S +D ++ LK+ L K GH+ +N + DGS + D K+WD+K
Sbjct: 173 IIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKE 232
Query: 381 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS-IYIMTLQGQVVKSFSSGK 439
L + L G +++NS+ F +P +C T I I L+ +++ S
Sbjct: 233 GKHLYS------LETG-STINSL-CF--SPCDYWLCAATDRFIRIWNLESKLIISEIYPV 282
Query: 440 REGGDFVAACVS----PKGEWIYCVGEDRNLYCF 469
++ V C S G+ +YC D N+Y +
Sbjct: 283 KQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVY 316
Score = 159 (61.0 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 60/235 (25%), Positives = 99/235 (42%)
Query: 263 HDETVLCIEFSRDSEM--LASGSQDGKIKVWRIR----SGQC--LRRLERAHSEGVTSLV 314
H + V + D ++ + S S+D K+ VW I SG+ ++ HS+ + +
Sbjct: 20 HSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVS 79
Query: 315 FSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
S DG LS S+D + R+ L G+ ++ F GH+S V F+ D ++V+AS D T+K
Sbjct: 80 ISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIK 139
Query: 375 VWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK-NPDHIVVCNKTSSIYIMTLQGQVVK 433
+W+ + C T + D + V P N IV C + + L+ +
Sbjct: 140 LWNTLA-QCKYTITDQ---QHTDW-ITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLN 194
Query: 434 SFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 488
G G +SP G G+D + + GK HL + I
Sbjct: 195 KNLEGHT--GVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK--HLYSLETGSTI 245
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 59/223 (26%), Positives = 101/223 (45%)
Query: 302 LERAHSEGVTSLVFSRDGS--QILSTSFDSTARIHGLK----SGKL---LKEFRGHSSYV 352
LE HS+ VTS+ D I+S S D + + SG++ K GHS +
Sbjct: 16 LEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAI 75
Query: 353 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 412
ND ++DG ++ S D +V++WDL + +++F G + V SV P N
Sbjct: 76 NDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFI------GHTSDVFSVSFSPDNRQ- 128
Query: 413 IVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV----SPKGEWIYCVGEDRNLYC 468
IV ++ +I + Q ++ ++ D++ CV SP I G D+ +
Sbjct: 129 IVSASRDKTIKLWNTLAQC--KYTITDQQHTDWIT-CVRFSPSPNQAIIVSCGWDKLVKV 185
Query: 469 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
++ ++ L ++ H + VT P +L A+ G+D KLW
Sbjct: 186 WNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLW 228
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 206 (77.6 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 72/274 (26%), Positives = 124/274 (45%)
Query: 207 TIKFGTKSHAECAR---FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMH 263
T K H++ S DG F +S S+D + + WD G+ + +F+ H
Sbjct: 63 TAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRL-WDLSLGETIR--------SFIGH 113
Query: 264 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL-ERAHSEGVTSLVFSRDGSQ- 321
V + FS D+ + S S+D IK+W + QC + ++ H++ +T + FS +Q
Sbjct: 114 TSDVFSVSFSPDNRQIVSASRDKTIKLWNTLA-QCKYTITDQQHTDWITCVRFSPSPNQA 172
Query: 322 -ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
I+S +D ++ LK+ L K GH+ +N + DGS + D K+WD+K
Sbjct: 173 IIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKE 232
Query: 381 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS-IYIMTLQGQVVKSFSSGK 439
L + L G +++NS+ F +P +C T I I L+ +++ S
Sbjct: 233 GKHLYS------LETG-STINSL-CF--SPCDYWLCAATDRFIRIWNLESKLIISEIYPV 282
Query: 440 REGGDFVAACVS----PKGEWIYCVGEDRNLYCF 469
++ V C S G+ +YC D N+Y +
Sbjct: 283 KQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVY 316
Score = 159 (61.0 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 60/235 (25%), Positives = 99/235 (42%)
Query: 263 HDETVLCIEFSRDSEM--LASGSQDGKIKVWRIR----SGQC--LRRLERAHSEGVTSLV 314
H + V + D ++ + S S+D K+ VW I SG+ ++ HS+ + +
Sbjct: 20 HSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVS 79
Query: 315 FSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
S DG LS S+D + R+ L G+ ++ F GH+S V F+ D ++V+AS D T+K
Sbjct: 80 ISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIK 139
Query: 375 VWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK-NPDHIVVCNKTSSIYIMTLQGQVVK 433
+W+ + C T + D + V P N IV C + + L+ +
Sbjct: 140 LWNTLA-QCKYTITDQ---QHTDW-ITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLN 194
Query: 434 SFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 488
G G +SP G G+D + + GK HL + I
Sbjct: 195 KNLEGHT--GVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK--HLYSLETGSTI 245
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 59/223 (26%), Positives = 101/223 (45%)
Query: 302 LERAHSEGVTSLVFSRDGS--QILSTSFDSTARIHGLK----SGKL---LKEFRGHSSYV 352
LE HS+ VTS+ D I+S S D + + SG++ K GHS +
Sbjct: 16 LEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAI 75
Query: 353 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 412
ND ++DG ++ S D +V++WDL + +++F G + V SV P N
Sbjct: 76 NDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFI------GHTSDVFSVSFSPDNRQ- 128
Query: 413 IVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV----SPKGEWIYCVGEDRNLYC 468
IV ++ +I + Q ++ ++ D++ CV SP I G D+ +
Sbjct: 129 IVSASRDKTIKLWNTLAQC--KYTITDQQHTDWIT-CVRFSPSPNQAIIVSCGWDKLVKV 185
Query: 469 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
++ ++ L ++ H + VT P +L A+ G+D KLW
Sbjct: 186 WNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLW 228
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 208 (78.3 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 72/299 (24%), Positives = 127/299 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + C +F P+G L S FD I ++W+ D A T H V+ +
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLI-LLWNVYG-----DCDNYA--TLKGHSGAVMEL 115
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDS 329
++ D ML S S D + VW +G+ ++RL + H+ V S +R G Q++ T S D
Sbjct: 116 HYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDG 174
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFK 388
T ++ ++ ++ F+ ++Y A+ ND S ++++ D +KVWDL+ T +
Sbjct: 175 TVKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 232
Query: 389 P-PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVA 447
+ G S +L D+ V + + + + VK F +
Sbjct: 233 GHADSVTGLSLSSEGSYLLSNAMDNTV---RVWDVRPFAPKERCVKIFQGNVHNFEKNLL 289
Query: 448 ACV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
C SP G I DR +Y + S ++ + + H + V HP ++ + D
Sbjct: 290 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSD 348
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 48/222 (21%), Positives = 96/222 (43%)
Query: 292 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSS 350
R S Q L H V F +GS + S FD + + +GHS
Sbjct: 51 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 110
Query: 351 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 410
V + + DGS + +AS+D TV VWD ++ + ++ L+G + VNS + + P
Sbjct: 111 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR------LKGHTSFVNSCYPARRGP 164
Query: 411 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 469
+ + ++ + ++ + +++F + + +A + + I G D ++ +
Sbjct: 165 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ----VLAVTFNDTSDQIISGGIDNDIKVW 220
Query: 470 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ KL + M+ H V G++ + L + D T+++W
Sbjct: 221 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 208 (78.3 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 72/299 (24%), Positives = 127/299 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + C +F P+G L S FD I ++W+ D A T H V+ +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLI-LLWNVYG-----DCDNYA--TLKGHSGAVMEL 116
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDS 329
++ D ML S S D + VW +G+ ++RL + H+ V S +R G Q++ T S D
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFK 388
T ++ ++ ++ F+ ++Y A+ ND S ++++ D +KVWDL+ T +
Sbjct: 176 TVKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 389 P-PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVA 447
+ G S +L D+ V + + + + VK F +
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTV---RVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 448 ACV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
C SP G I DR +Y + S ++ + + H + V HP ++ + D
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 48/222 (21%), Positives = 96/222 (43%)
Query: 292 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSS 350
R S Q L H V F +GS + S FD + + +GHS
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 111
Query: 351 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 410
V + + DGS + +AS+D TV VWD ++ + ++ L+G + VNS + + P
Sbjct: 112 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR------LKGHTSFVNSCYPARRGP 165
Query: 411 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 469
+ + ++ + ++ + +++F + + +A + + I G D ++ +
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ----VLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 470 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ KL + M+ H V G++ + L + D T+++W
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 208 (78.3 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 72/299 (24%), Positives = 127/299 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + C +F P+G L S FD I ++W+ D A T H V+ +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLI-LLWNVYG-----DCDNYA--TLKGHSGAVMEL 116
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDS 329
++ D ML S S D + VW +G+ ++RL + H+ V S +R G Q++ T S D
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFK 388
T ++ ++ ++ F+ ++Y A+ ND S ++++ D +KVWDL+ T +
Sbjct: 176 TVKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 389 P-PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVA 447
+ G S +L D+ V + + + + VK F +
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTV---RVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 448 ACV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
C SP G I DR +Y + S ++ + + H + V HP ++ + D
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 48/222 (21%), Positives = 96/222 (43%)
Query: 292 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSS 350
R S Q L H V F +GS + S FD + + +GHS
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 111
Query: 351 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 410
V + + DGS + +AS+D TV VWD ++ + ++ L+G + VNS + + P
Sbjct: 112 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR------LKGHTSFVNSCYPARRGP 165
Query: 411 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 469
+ + ++ + ++ + +++F + + +A + + I G D ++ +
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ----VLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 470 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ KL + M+ H V G++ + L + D T+++W
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 215 (80.7 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 55/161 (34%), Positives = 86/161 (53%)
Query: 227 FLVSCSFDGFIEVVWDYLSGKLKK-DLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD 285
FL S S D ++ L +L K D +A T HD V I+ S+D ++AS SQD
Sbjct: 429 FLASSSQDRTLKRF--NLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQD 486
Query: 286 GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEF 345
IK+W +G+ + L R H GV + F+ Q+ S S D T RI + + + ++
Sbjct: 487 KTIKLWDSSTGEVVGVL-RGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTL 545
Query: 346 RGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 386
GH+ + I+ + G++VV+A++D VKVW L S +C+ T
Sbjct: 546 EGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVAT 586
Score = 182 (69.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 49/170 (28%), Positives = 81/170 (47%)
Query: 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDET 266
TIK + + S DG+ + S S D I++ WD +G++ L+ H
Sbjct: 460 TIKAHDRD-VNAIQVSKDGRIIASASQDKTIKL-WDSSTGEVVGVLRG--------HRRG 509
Query: 267 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS 326
V F+ S LASGS D I++W + + QC++ LE H+ + L++ G+Q++S +
Sbjct: 510 VWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLE-GHTGAILKLIYISQGTQVVSAA 568
Query: 327 FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
D ++ L SG+ + H V DGS +V+ +D V VW
Sbjct: 569 ADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 45/182 (24%), Positives = 89/182 (48%)
Query: 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDET 266
+IK + + D + L++ +F + +++ SG+ K ++ H+
Sbjct: 55 SIKKDEDDYVTALAITSDSKKLIA-AFRSRLLTIYEIPSGRRIKSMK--------AHETP 105
Query: 267 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR-DGSQILST 325
V+ + + +LA+G +G +KVW I +G + R H +++L F + + +L++
Sbjct: 106 VITMTIDPTNTLLATGGAEGLVKVWDI-AGAYVTHSFRGHGGVISALCFGKHQNTWVLAS 164
Query: 326 SFD-STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL 384
D S R+ L S + + F GHSS + F GS +++ S D TV+VW++K +
Sbjct: 165 GADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAV 224
Query: 385 QT 386
+T
Sbjct: 225 RT 226
Score = 139 (54.0 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 72/304 (23%), Positives = 127/304 (41%)
Query: 223 PDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE-MLAS 281
P+ + L + +G + + WD+ SG L D T H ET I+ SE L S
Sbjct: 243 PEEKILYTAG-EGNLILAWDWKSGSR---LDPGVDTT---HSETNAIIQVVPFSENTLLS 295
Query: 282 GSQDGKIKVWRIRSGQ---CLRRLERAHSEGVTSLVFSRDGSQILS-TSFDSTARIHGLK 337
D + + + G+ +++L + E + D + S T F G +
Sbjct: 296 VHSDLSLLLRKRVPGEGFITIKKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVISTDGTQ 355
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
+L+ GH+ V + DG + T + D TV++W+L D +K G
Sbjct: 356 VFGVLE---GHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIED--NVYKCIHVFTGHT 410
Query: 398 ASVNSVHLFPKN----PDHIVVCNKTSSIYIMTLQGQVVKS-FSSG-----KREGGDFVA 447
ASV +V L P + P + ++ ++ L Q+ KS FS+ K D A
Sbjct: 411 ASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNA 470
Query: 448 ACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCT 507
VS G I +D+ + + +G++ +++ H + V + +P LA+ D T
Sbjct: 471 IQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRT 530
Query: 508 MKLW 511
+++W
Sbjct: 531 IRIW 534
Score = 132 (51.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 46/181 (25%), Positives = 83/181 (45%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI-----EFSRDS 276
S DG +L + + D + + W+ L+ +D Y+ F H +V + + +
Sbjct: 373 SEDGVWLATGAKDNTVRL-WN-LN---IEDNVYKCIHVFTGHTASVTAVALGPLDVNGYP 427
Query: 277 EMLASGSQDGKIKVWRIRSGQCLRRLE---------RAHSEGVTSLVFSRDGSQILSTSF 327
LAS SQD +K R G L + + +AH V ++ S+DG I S S
Sbjct: 428 TFLASSSQDRTLK--RFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQ 485
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
D T ++ +G+++ RGH V F ++ + S D T+++W++ + C+QT
Sbjct: 486 DKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTL 545
Query: 388 K 388
+
Sbjct: 546 E 546
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 213 (80.0 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 54/174 (31%), Positives = 85/174 (48%)
Query: 225 GQFLVSCSFDGFIEVVWD---------YLSGKLKKDLQ-YQADETFMM-----HDETVLC 269
G F + + G VWD + SG + + + D T+ + H V C
Sbjct: 390 GSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDC 449
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
++F +S LA+GS D +++W + G +R L H V SL FS +G + S D
Sbjct: 450 VKFHPNSNYLATGSTDKTVRLWSAQQGNSVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQ 508
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
++ L SG L KE RGH+ + F+ D S + +AS D +V+VWD+++T C
Sbjct: 509 RLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYC 562
Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 43/156 (27%), Positives = 75/156 (48%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + +C +F P+ +L + S D + + W G + F H VL +
Sbjct: 442 GHLADVDCVKFHPNSNYLATGSTDKTVRL-WSAQQGNSVR--------LFTGHRGPVLSL 492
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
FS + + LAS +D ++K+W + SG + L R H++ +TSL FS D S I S S D++
Sbjct: 493 AFSPNGKYLASAGEDQRLKLWDLASGTLYKEL-RGHTDNITSLTFSPDSSLIASASMDNS 551
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 366
R+ +++ G S + ++T S V++
Sbjct: 552 VRVWDIRNTYCSTPADGSSGELV-GVYTGQMSNVLS 586
Score = 158 (60.7 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 54/212 (25%), Positives = 97/212 (45%)
Query: 301 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 360
++ R H V S F D S +LS S D + R L S ++GH+ V D +
Sbjct: 354 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPY 413
Query: 361 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 420
+ S D T ++W T L+ + G A V+ V P N +++ +
Sbjct: 414 SLYFASGSHDRTARLWSFDRTYPLRIYA------GHLADVDCVKFHP-NSNYLATGSTDK 466
Query: 421 SIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 479
++ + + Q G V+ F+ G R G ++ SP G+++ GED+ L + SG L
Sbjct: 467 TVRLWSAQQGNSVRLFT-GHR--GPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKE 523
Query: 480 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
++ H ++ +T P +L+A+ D ++++W
Sbjct: 524 LRGHTDNITSLTFSPDSSLIASASMDNSVRVW 555
Score = 148 (57.2 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 47/161 (29%), Positives = 69/161 (42%)
Query: 220 RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 279
RF D L+SCS D I WD G + YQ H V ++ S S
Sbjct: 367 RFLADSSGLLSCSEDMSIRY-WDL--GSFTNTVLYQG------HAYPVWDLDISPYSLYF 417
Query: 280 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 339
ASGS D ++W LR + H V + F + + + + S D T R+ + G
Sbjct: 418 ASGSHDRTARLWSFDRTYPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQG 476
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
++ F GH V F+ +G + +A D +K+WDL S
Sbjct: 477 NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 517
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 60/242 (24%), Positives = 106/242 (43%)
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
E S DS++LA+G + IK+W +RS + L+ H V+ + + D IL D
Sbjct: 293 EISPDSKLLAAGFDNSCIKLWSLRSKK-LK--SEPHQVDVSRIHLACD---ILEEEDDED 346
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS-TDCLQTFKP 389
+G +K RGH V F D S +++ S D +++ WDL S T+ +
Sbjct: 347 DN-----AGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 401
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 449
P+ D ++ L+ + H ++T+ ++ + ++ ++ G D V
Sbjct: 402 AYPV--WDLDISPYSLYFASGSH----DRTARLWSFD-RTYPLRIYA-GHLADVDCVK-- 451
Query: 450 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 509
P ++ D+ + +S Q G L H V+ + P+ LA+ GED +K
Sbjct: 452 FHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLK 511
Query: 510 LW 511
LW
Sbjct: 512 LW 513
Score = 108 (43.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 52/223 (23%), Positives = 86/223 (38%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H V F DS L S S+D I+ W + S L + H+ V L S
Sbjct: 359 HCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV-LYQGHAYPVWDLDISPYSLYF 417
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
S S D TAR+ L+ + GH + V+ F + + + T S+D TV++W + +
Sbjct: 418 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 477
Query: 383 CLQTFKPPP-PLRGGDASVNSVHLFPKNPDH-IVVCNKTSSIYIMTLQGQVVKSFSSGKR 440
++ F P+ S N +L D + + + S L+G S
Sbjct: 478 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 537
Query: 441 EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH 483
+A+ ++ + RN YC + G L+ V+
Sbjct: 538 PDSSLIASASMDNSVRVWDI---RNTYCSTPADGSSGELVGVY 577
Score = 63 (27.2 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 26/91 (28%), Positives = 41/91 (45%)
Query: 175 GLLPPGTQFDLFRGTAAMK--QD----VEDMYP--TTLSHTIKFGTKSHAECARFSPDGQ 226
GL P + + AA++ Q+ V+D P TT+ + T+ A SPD +
Sbjct: 240 GLEPTDMPAPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSK 299
Query: 227 FLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
L++ FD +W S KLK + +Q D
Sbjct: 300 -LLAAGFDNSCIKLWSLRSKKLKSE-PHQVD 328
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 209 (78.6 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 46/128 (35%), Positives = 72/128 (56%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE-GVTSLVFSRD 318
F HD V ++FS S +LA+G D ++K+W + +C + + S G+TS+ F
Sbjct: 318 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSA 377
Query: 319 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
GS +L+ S D +RI + +L GHS V A F D +R+V+ S D T+K+WDL
Sbjct: 378 GSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 437
Query: 379 KSTDCLQT 386
+S C++T
Sbjct: 438 RSKVCIKT 445
Score = 197 (74.4 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 62/249 (24%), Positives = 117/249 (46%)
Query: 267 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS 326
+ IEF L + S D ++W + + LR HS V S F D ++I+S S
Sbjct: 369 ITSIEFDSAGSYLLAASNDFASRIWTVDDYR-LRHTLTGHSGKVLSAKFLLDNARIVSGS 427
Query: 327 FDSTARIHGLKSGKLLKE-FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 385
D T ++ L+S +K F G S ND + T V++ D ++ WD++S ++
Sbjct: 428 HDRTLKLWDLRSKVCIKTVFAGSSC--NDIVCTEQC--VMSGHFDKKIRFWDIRSESIVR 483
Query: 386 TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSS-GKREGG 443
+ L G + ++ L P+ + ++ C++ + ++ L+ +K +FS+ G + G
Sbjct: 484 EME----LLG---KITALDLNPERTE-LLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGS 535
Query: 444 DFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM-KVHEKDVIGVTHHPHRNLLATY 502
D+ SP G ++ + +LY +S +GK+E ++ K H + V P + + +
Sbjct: 536 DWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSV 595
Query: 503 GEDCTMKLW 511
+ C LW
Sbjct: 596 DKGCKAVLW 604
Score = 154 (59.3 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 63/252 (25%), Positives = 108/252 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G+ + F G +L++ S D F +W D Y+ T H VL
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASND-FASRIWTV-------D-DYRLRHTLTGHSGKVLSA 414
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F D+ + SGS D +K+W +RS C++ + S +V + ++S FD
Sbjct: 415 KFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSS--CNDIVCTEQC--VMSGHFDKK 470
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTN-DGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
R ++S +++E A+ N + + +++ S D +KV DL++ QTF
Sbjct: 471 IRFWDIRSESIVREMELLGKIT--ALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSA 528
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-LQGQVVKSFSSGKREGGDFVAA 448
P G D + V +F + ++ + S+YI + L G+V K S K+ A
Sbjct: 529 PGFKCGSDWT--RV-VFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLS--KQHSSSINAV 583
Query: 449 CVSPKGEWIYCV 460
SP G + V
Sbjct: 584 AWSPSGSHVVSV 595
Score = 48 (22.0 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 16/61 (26%), Positives = 32/61 (52%)
Query: 55 RWDAILPQVAQLKLPRNKLE-DLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPER 113
RW + + QL+ R++L+ +E+I+L+ +L E ++L Q + K + P R
Sbjct: 12 RWKRHISE--QLRR-RDRLQRQAFEEIILQYNKLLEKSDLHSVL--AQKLQAEKHDVPNR 66
Query: 114 Y 114
+
Sbjct: 67 H 67
>FB|FBgn0034876 [details] [associations]
symbol:wmd "wing morphogenesis defect" species:7227
"Drosophila melanogaster" [GO:0005102 "receptor binding"
evidence=ISS] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007476 GeneTree:ENSGT00630000089849 KO:K13137 OMA:LWQTTVG
EMBL:AY061000 RefSeq:NP_001097436.1 RefSeq:NP_611804.1
UniGene:Dm.3756 SMR:Q9W1N4 STRING:Q9W1N4 EnsemblMetazoa:FBtr0072114
EnsemblMetazoa:FBtr0113112 GeneID:37727 KEGG:dme:Dmel_CG3957
UCSC:CG3957-RA CTD:37727 FlyBase:FBgn0034876 InParanoid:Q9W1N4
OrthoDB:EOG4QBZMZ ChiTaRS:wmd GenomeRNAi:37727 NextBio:805102
Uniprot:Q9W1N4
Length = 328
Score = 205 (77.2 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 66/255 (25%), Positives = 114/255 (44%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
TF H V +R++ + ASG+ D KVW +G + + H V S+ F RD
Sbjct: 57 TFEGHKGAVWNATLNRNATLAASGAADFTGKVWNAVTGAEIHSFQHKHI--VKSVAFDRD 114
Query: 319 GSQILSTSFDSTARIHGLKSGKLL-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
I++ S + R+ L+ + +E+ GH+ + A+F +++A+ D TV++WD
Sbjct: 115 SENIVTGSNEKLVRVFNLEQPEAQPEEYAGHTGAIKRALFCRGDKCIISAAEDKTVRLWD 174
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 437
+ +Q + +++ NS+ + N HI+ + SSI + +K
Sbjct: 175 RMTGIEVQRLQ-------FNSNPNSLEISSDN--HILTISHGSSISFWEID--TLKKLKE 223
Query: 438 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 497
K + +A + P C GED +Y F + +G K H V V P
Sbjct: 224 VKVPT-NVASASLHPDKHVFVCGGEDFKMYKFDYITGNEIESFKGHFGPVHSVKFSPDGE 282
Query: 498 LLATYGEDCTMKLWK 512
L A+ ED T++LW+
Sbjct: 283 LYASGSEDGTLRLWQ 297
Score = 146 (56.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 56/230 (24%), Positives = 99/230 (43%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H V + F RDSE + +GS + ++V+ + + H+ + +F R I
Sbjct: 102 HKHIVKSVAFDRDSENIVTGSNEKLVRVFNLEQPEAQPEEYAGHTGAIKRALFCRGDKCI 161
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
+S + D T R+ +G ++ + +S+ N ++D + ++T S ++ W++ +
Sbjct: 162 ISAAEDKTVRLWDRMTGIEVQRLQFNSN-PNSLEISSD-NHILTISHGSSISFWEIDTLK 219
Query: 383 CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN-KTSSIYIMT-LQGQVVKSFSSGKR 440
L+ K P +V S L P H+ VC + +Y + G ++SF K
Sbjct: 220 KLKEVKVP-------TNVASASLHPDK--HVFVCGGEDFKMYKFDYITGNEIESF---KG 267
Query: 441 EGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMKVHEKDVIG 489
G + SP GE +Y G ED L + GK L K E +G
Sbjct: 268 HFGPVHSVKFSPDGE-LYASGSEDGTLRLWQTTVGKTYGLWKCTEPADLG 316
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 150 (57.9 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 288 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG 347
IK+W + +C+R + H V+S+ +G I+S S D T ++ +++G +K F G
Sbjct: 3 IKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 348 HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
H +V DG+ + + S+D TV+VW + + +C
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC 97
Score = 130 (50.8 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 33/129 (25%), Positives = 65/129 (50%)
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
+TF H E V + ++D ++AS S D ++VW + + +C L R H V + ++
Sbjct: 57 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL-REHEHVVECISWAP 115
Query: 318 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ +S+ S + G + G H ++V +F + G +++ + D T++VWD
Sbjct: 116 E------SSYSSISEATGSEVG--------HDNWVRGVLFHSGGKFILSCADDKTLRVWD 161
Query: 378 LKSTDCLQT 386
K+ C++T
Sbjct: 162 YKNKRCMKT 170
Score = 119 (46.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 251 DLQ-YQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG 309
D Q ++ T HD V + + + + S S+D IK+W +++G C++ H E
Sbjct: 7 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREW 65
Query: 310 VTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYV 352
V + ++DG+ I S S D T R+ + + + E R H V
Sbjct: 66 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 108
Score = 113 (44.8 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 26/77 (33%), Positives = 36/77 (46%)
Query: 303 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS 362
E H V ++F G ILS + D T R+ K+ + +K H +V F
Sbjct: 129 EVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP 188
Query: 363 RVVTASSDCTVKVWDLK 379
VVT S D TVKVW+ +
Sbjct: 189 YVVTGSVDQTVKVWECR 205
Score = 104 (41.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 372 TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQ 430
T+K+WD + +C++T + G D +V+SV + P N DHIV ++ +I + +Q G
Sbjct: 2 TIKLWDFQGFECIRT------MHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGY 54
Query: 431 VVKSFSSGKRE 441
VK+F+ G RE
Sbjct: 55 CVKTFT-GHRE 64
Score = 90 (36.7 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
T ++ + + ++ GH V+ +G +V+AS D T+K+W++++ C++TF
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 59
Score = 62 (26.9 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 454 GEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
G++I +D+ L + +++ + + HE V + H + T D T+K+W+
Sbjct: 145 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 203
Score = 57 (25.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 26/104 (25%), Positives = 44/104 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVVWDYLSG 246
+A + M+ + +K T H E R + DG + SCS D + V W +
Sbjct: 38 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRV-WVVATK 95
Query: 247 KLKKDLQYQADETFMMHDETVLCIEFSRDSEML----ASGSQDG 286
+ K +L+ H+ V CI ++ +S A+GS+ G
Sbjct: 96 ECKAELRE--------HEHVVECISWAPESSYSSISEATGSEVG 131
Score = 44 (20.5 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 483 HEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H+ V GV H + + +D T+++W
Sbjct: 132 HDNWVRGVLFHSGGKFILSCADDKTLRVW 160
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 206 (77.6 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 79/306 (25%), Positives = 137/306 (44%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVVWD-YLSGKLKKDLQYQADETFMMHDETVLCIEFSRDS 276
C +S D + +VS S DG + +VWD + + K + M V+ FS S
Sbjct: 73 CMDWSLDKRHIVSSSQDGKV-IVWDGFTTNK---------EHALTMPTTWVMACAFSPSS 122
Query: 277 EMLASGSQDGKIKVWRIRSGQCLRRLER---AHSEGVTSLVFSRDGSQILSTSFDSTARI 333
+M+A G D K V + + + +R H+ ++ F R + IL+ S DST I
Sbjct: 123 QMIACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAI 182
Query: 334 HGLKSGKLLKEFRGHSS--YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 391
++SG+L++ F GH+ + D + G+ ++A +D VWD++S C+Q+F+
Sbjct: 183 WDVESGQLIQNFHGHTGDVFAIDVPKCDTGNTFISAGADKHSLVWDIRSGQCVQSFE--- 239
Query: 392 PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG--QVV---KSFSSGKREGGDF- 445
G +A +N+V P N D + ++ + L+ QV K G DF
Sbjct: 240 ---GHEADINTVRFHP-NGDAFATGSDDATCRLFDLRADRQVCVYEKESILFPVNGVDFS 295
Query: 446 VAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
++ + G Y VG +L C H ++ HE + + P + + D
Sbjct: 296 LSGRILFAGYGDYRVGVWDSLKCARHS------VLYGHENRISCLRTSPDGTAVCSASWD 349
Query: 506 CTMKLW 511
CT+++W
Sbjct: 350 CTIRIW 355
Score = 182 (69.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 57/224 (25%), Positives = 98/224 (43%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
V D + T H + T CA FSP Q + D VV LS + D+ Q
Sbjct: 94 VWDGFTTNKEHALTMPTTWVMACA-FSPSSQMIACGGLDNKCSVV--PLS--FEDDI-IQ 147
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
H + C F R ++ +GS D +W + SGQ ++ H+ V ++
Sbjct: 148 KKRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFH-GHTGDVFAIDV 206
Query: 316 SR-D-GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTV 373
+ D G+ +S D + + ++SG+ ++ F GH + +N F +G T S D T
Sbjct: 207 PKCDTGNTFISAGADKHSLVWDIRSGQCVQSFEGHEADINTVRFHPNGDAFATGSDDATC 266
Query: 374 KVWDLKSTDCLQTFKPPP---PLRGGDASVNSVHLFPKNPDHIV 414
+++DL++ + ++ P+ G D S++ LF D+ V
Sbjct: 267 RLFDLRADRQVCVYEKESILFPVNGVDFSLSGRILFAGYGDYRV 310
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 65/260 (25%), Positives = 105/260 (40%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H VLC+++S D + S SQDGK+ VW + L + V + FS I
Sbjct: 67 HVGKVLCMDWSLDKRHIVSSSQDGKVIVWDGFTTNKEHALTMP-TTWVMACAFSPSSQMI 125
Query: 323 LSTSFDSTARIHGLK-SGKLLKEFRG---HSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
D+ + L ++++ R H+SY++ F + ++T S D T +WD+
Sbjct: 126 ACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDV 185
Query: 379 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSS 437
+S +Q F GD V I +K S ++ + GQ V+SF
Sbjct: 186 ESGQLIQNFHG----HTGDVFAIDVPKCDTGNTFISAGADKHSLVWDIR-SGQCVQSFEG 240
Query: 438 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI-----GVTH 492
+ D P G+ + G D + C + + + V+EK+ I GV
Sbjct: 241 HE---ADINTVRFHPNGD-AFATGSD-DATCRLFDL-RADRQVCVYEKESILFPVNGVDF 294
Query: 493 H-PHRNLLATYGEDCTMKLW 511
R L A YG D + +W
Sbjct: 295 SLSGRILFAGYG-DYRVGVW 313
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 208 (78.3 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 72/295 (24%), Positives = 126/295 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + C +F P+G L S FD I ++W+ D A T H V+ +
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLI-LLWNVYG-----DCDNYA--TLKGHSGAVMEL 115
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDS 329
++ D ML S S D + VW +G+ ++RL + H+ V S +R G Q++ T S D
Sbjct: 116 HYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDG 174
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFK 388
T ++ ++ ++ F+ ++Y A+ ND S ++++ D +KVWDL+ T +
Sbjct: 175 TVKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 232
Query: 389 P-PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVA 447
+ G S +L D+ V + + + + VK F +
Sbjct: 233 GHADSVTGLSLSSEGSYLLSNAMDNTV---RVWDVRPFAPKERCVKIFQGNVHNFEKNLL 289
Query: 448 ACV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLAT 501
C SP G I DR +Y + S ++ + + H + V HP ++ T
Sbjct: 290 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIET 344
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 48/222 (21%), Positives = 96/222 (43%)
Query: 292 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSS 350
R S Q L H V F +GS + S FD + + +GHS
Sbjct: 51 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 110
Query: 351 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 410
V + + DGS + +AS+D TV VWD ++ + ++ L+G + VNS + + P
Sbjct: 111 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR------LKGHTSFVNSCYPARRGP 164
Query: 411 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 469
+ + ++ + ++ + +++F + + +A + + I G D ++ +
Sbjct: 165 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ----VLAVTFNDTSDQIISGGIDNDIKVW 220
Query: 470 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ KL + M+ H V G++ + L + D T+++W
Sbjct: 221 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 206 (77.6 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 72/299 (24%), Positives = 127/299 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + C +F P+G L S FD I ++W+ D A T H V+ +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLI-LLWNVYG-----DCDNYA--TLKGHSGAVMEL 116
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDS 329
++ D ML S S D + VW +G+ ++RL + H+ V S +R G Q++ T S D
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFK 388
T ++ ++ ++ F+ ++Y A+ ND S ++++ D +KVWDL+ T +
Sbjct: 176 TVKLWDIRKKAAVQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 389 P-PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVA 447
+ G S +L D+ V + + + + VK F +
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTV---RVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 448 ACV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
C SP G I DR +Y + S ++ + + H + V HP ++ + D
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 49/222 (22%), Positives = 96/222 (43%)
Query: 292 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSS 350
R S Q L H V F +GS + S FD + + +GHS
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 111
Query: 351 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 410
V + + DGS + +AS+D TV VWD ++ + ++ L+G + VNS + + P
Sbjct: 112 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR------LKGHTSFVNSCYPARRGP 165
Query: 411 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 469
+ + ++ + ++ + V++F + + +A + + I G D ++ +
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQ----VLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 470 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ KL + M+ H V G++ + L + D T+++W
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 189 (71.6 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 62/256 (24%), Positives = 122/256 (47%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
F + V C+ F + +LA G G+ +++ + +++L + V ++ ++ G
Sbjct: 256 FYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNP-VNTVSVNQTG 314
Query: 320 SQI-LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
+ +S ++ +S + + +GH N ++ DGSRVVTAS D +KVWD+
Sbjct: 315 EWLAFGSSKLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDI 374
Query: 379 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSS 437
S CL TF+ +SV +V F K + + ++ L + + ++F+
Sbjct: 375 TSGFCLATFEEHT------SSVTAVQ-FAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTG 427
Query: 438 GKREGGDFVAACVSPKGEWIYCVG--EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 495
+R F V P GE + C G ++ +++ +S Q+G+L + HE V ++
Sbjct: 428 TERI--QFNCLAVDPSGE-VVCAGSLDNFDIHVWSVQTGQLLDALSGHEGPVSCLSFSQE 484
Query: 496 RNLLATYGEDCTMKLW 511
++LA+ D T+++W
Sbjct: 485 NSVLASASWDKTIRIW 500
Score = 162 (62.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 42/159 (26%), Positives = 75/159 (47%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
+SPDG +V+ S DG I+V WD SG TF H +V ++F++ +++
Sbjct: 353 YSPDGSRVVTASEDGKIKV-WDITSGFCLA--------TFEEHTSSVTAVQFAKRGQVMF 403
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS-TARIHGLKSG 339
S S DG ++ W + + R L G + + S D+ + +++G
Sbjct: 404 SSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQTG 463
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
+LL GH V+ F+ + S + +AS D T+++W +
Sbjct: 464 QLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSI 502
Score = 132 (51.5 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 265 ETVLCIEFSRDSEMLASGSQDGK-IKVWRI----RSGQCL----RRLERAHSEGVTSLVF 315
E ++FS D + A S G+ +++W+ + Q R+ H + +TSL +
Sbjct: 97 EKCSAVKFSPDGRLFALAS--GRFLQIWKTPDVNKDRQFAPFVRHRVHAGHFQDITSLTW 154
Query: 316 SRDGSQILSTSFDSTARIHGLKSGK---LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCT 372
S+D IL+TS D +A+I + S + F GH YV A F++D ++ T S D
Sbjct: 155 SQDSRFILTTSKDLSAKIWSVDSEEKNLAATTFNGHRDYVMGAFFSHDQEKIYTVSKDGA 214
Query: 373 VKVWD 377
V VW+
Sbjct: 215 VFVWE 219
Score = 124 (48.7 bits), Expect = 0.00040, P = 0.00040
Identities = 37/122 (30%), Positives = 57/122 (46%)
Query: 214 SHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVL-CIEF 272
S +F+ GQ + S S DG + WD + +Y+ TF + C+
Sbjct: 388 SSVTAVQFAKRGQVMFSSSLDGTVRA-WDLI--------RYRNFRTFTGTERIQFNCLAV 438
Query: 273 SRDSEMLASGSQDG-KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 331
E++ +GS D I VW +++GQ L L H V+ L FS++ S + S S+D T
Sbjct: 439 DPSGEVVCAGSLDNFDIHVWSVQTGQLLDALS-GHEGPVSCLSFSQENSVLASASWDKTI 497
Query: 332 RI 333
RI
Sbjct: 498 RI 499
Score = 74 (31.1 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDE 265
H + G +S D +F+++ S D +W S + K+L A TF H +
Sbjct: 139 HRVHAGHFQDITSLTWSQDSRFILTTSKD-LSAKIWSVDSEE--KNL---AATTFNGHRD 192
Query: 266 TVLCIEFSRDSEMLASGSQDGKIKVW 291
V+ FS D E + + S+DG + VW
Sbjct: 193 YVMGAFFSHDQEKIYTVSKDGAVFVW 218
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 214 (80.4 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 61/172 (35%), Positives = 95/172 (55%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVVWDY--LSGKLKKDLQYQADETFMMHDETVLCIEFSRD 275
C+R QF+VS S D ++V WD +G + + +A T H++ V + S +
Sbjct: 440 CSRMKQ--QFVVSGSQDCTVKV-WDLPETTGA-EGVMMMKARSTERAHEKDVNSVCVSPN 495
Query: 276 SEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL-STSFDSTARIH 334
++LASGSQD K+W + S L + R H GV S+ FS QIL S S D + RI
Sbjct: 496 DKLLASGSQDRTAKLWAL-SDLRLLGVCRGHRRGVWSVQFS-PVDQILGSASADGSVRIW 553
Query: 335 GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 386
++ LK F GH + V IF + G+++V++ SD VK+W +K+ +C++T
Sbjct: 554 SIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVRT 605
Score = 173 (66.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 63/224 (28%), Positives = 102/224 (45%)
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDE 265
H+I+ + SPD + LVS S + WD+ + ++ ++A +H
Sbjct: 56 HSIEQEDQEDITAFALSPDDEMLVSAS-RALLLRQWDWKQQQCRRS--WRA-----VHSV 107
Query: 266 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV-FSRDGS--QI 322
V + F S +LA+G DG IK+W + C L+ S GV LV F D S Q+
Sbjct: 108 PVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKG--SSGVVHLVEFHPDISRLQL 165
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
S+S D RI L+S + + H S V F+ DG +V++ D VWDL+
Sbjct: 166 FSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQE-- 223
Query: 383 CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT 426
Q K P+ +V V L + D+ + K+ +++++T
Sbjct: 224 --QKVKRTIPVY---EAVEGVVLLSGSADYSEMGVKSDALHLVT 262
Score = 167 (63.8 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 61/263 (23%), Positives = 116/263 (44%)
Query: 258 ETFMMHDETVLCIEF-SRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 316
+ F+ +++ VL ++F +D +A + ++KV+ + + C ++ H++ + S+
Sbjct: 338 QQFVGYNDDVLDVKFVGKDDTHIAVATNSSQLKVFELSTNSC--QILHGHTDTILSIDVF 395
Query: 317 RDGSQILSTSFDSTARIHGL--KSGKL--LKEFRGHSSYVNDAIFTNDGSR-VVTASSDC 371
R GS + + D + R+ + SG++ + + GHS+ V + + VV+ S DC
Sbjct: 396 RKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDC 455
Query: 372 TVKVWDLKST---DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ 428
TVKVWDL T + + K R + VNSV + P N + ++ + + L
Sbjct: 456 TVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSP-NDKLLASGSQDRTAKLWALS 514
Query: 429 GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 488
+ G R G V SP + + D ++ +S Q + H+ V+
Sbjct: 515 DLRLLGVCRGHRRGVWSVQ--FSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVL 572
Query: 489 GVTHHPHRNLLATYGEDCTMKLW 511
+ L + G D +KLW
Sbjct: 573 KIIFVSRGTQLVSSGSDGLVKLW 595
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 74/293 (25%), Positives = 127/293 (43%)
Query: 225 GQFLVSCSFDGFIEVVW--DYLSGKLKKDLQYQADETFMMHDETVLCIEFSR-DSEMLAS 281
G +C+ D + V W D SG++ Q H V I SR + + S
Sbjct: 398 GSMFATCAKDKSVRV-WRMDVSSGRVHCVAQGTG------HSNAVGSIACSRMKQQFVVS 450
Query: 282 GSQDGKIKVWRI-----RSGQCL---RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI 333
GSQD +KVW + G + R ERAH + V S+ S + + S S D TA++
Sbjct: 451 GSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKL 510
Query: 334 HGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPL 393
L +LL RGH V F+ + +AS+D +V++W ++ CL+TF+
Sbjct: 511 WALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFE----- 565
Query: 394 RGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSP 452
G DASV + +F +V + + T++ + V++ + + + C
Sbjct: 566 -GHDASVLKI-IFVSRGTQLVSSGSDGLVKLWTIKTNECVRTLDAHQDKVWALHGGC--- 620
Query: 453 KGEWIYCVGEDRNLYCFSHQSGK---LEHLMKVHEKDVIGVTHHPHRNLLATY 502
+ E + D + ++ + K ++ KV ++ + TH RNL+ Y
Sbjct: 621 RDELMVTGSADSTITVWTDKLRKTVIIKSTKKV-DQSLFKFTHF--RNLIYXY 670
Score = 148 (57.2 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 44/165 (26%), Positives = 77/165 (46%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S D Q + C++ I ++ +GK+ ++ Q D+ E + S D EML S
Sbjct: 30 SGDEQHIF-CTYGPKINIL-QISTGKIIHSIE-QEDQ------EDITAFALSPDDEMLVS 80
Query: 282 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 341
S+ ++ W + QC R HS V S+ F + + + D T ++ +
Sbjct: 81 ASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYC 140
Query: 342 LKEFRGHSSYVNDAIFTNDGSRV--VTASSDCTVKVWDLKSTDCL 384
+G S V+ F D SR+ ++SSDC +++WDL+S+ C+
Sbjct: 141 THNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCV 185
Score = 139 (54.0 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 69/285 (24%), Positives = 119/285 (41%)
Query: 245 SGKLKK-DLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWR--IRSGQ--CL 299
S +LK +L + + H +T+L I+ R M A+ ++D ++VWR + SG+ C+
Sbjct: 366 SSQLKVFELSTNSCQILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCV 425
Query: 300 RRLERAHSEGVTSLVFSRDGSQ-ILSTSFDSTARI---------HGLKSGKLLKEFRGHS 349
+ HS V S+ SR Q ++S S D T ++ G+ K R H
Sbjct: 426 AQ-GTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHE 484
Query: 350 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN 409
VN + + + + S D T K+W L L RG V SV P
Sbjct: 485 KDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGV------CRGHRRGVWSVQFSPV- 537
Query: 410 PDHIV-VCNKTSSIYIMTLQG-QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLY 467
D I+ + S+ I ++Q +K+F + VS +G + G D +
Sbjct: 538 -DQILGSASADGSVRIWSIQDFSCLKTFEG--HDASVLKIIFVS-RGTQLVSSGSDGLVK 593
Query: 468 CFSHQSGKLEHLMKVHEKDVIGVTHHPHRN-LLATYGEDCTMKLW 511
++ ++ + + H+ D + H R+ L+ T D T+ +W
Sbjct: 594 LWTIKTNECVRTLDAHQ-DKVWALHGGCRDELMVTGSADSTITVW 637
Score = 131 (51.2 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 49/180 (27%), Positives = 82/180 (45%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD-SEM- 278
F L + DG I++ WD + +L+ + ++H +EF D S +
Sbjct: 114 FDCTSTLLATGGCDGTIKL-WDVIKQYCTHNLKGSSG---VVH-----LVEFHPDISRLQ 164
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 338
L S S D I++W +RS +C+ LE +H VT+L FS DG ++S+ D + L+
Sbjct: 165 LFSSSSDCAIRIWDLRSSRCVCVLE-SHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQE 223
Query: 339 GKLLKEF------------RGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 386
K+ + G + Y + +D +VTA S ++VWD S+ C+ T
Sbjct: 224 QKVKRTIPVYEAVEGVVLLSGSADYSEMGV-KSDALHLVTAGSKGVLRVWDSSSSRCVFT 282
>UNIPROTKB|I3LNC4 [details] [associations]
symbol:STRAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030512 "negative regulation of transforming growth
factor beta receptor signaling pathway" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 GO:GO:0000122 GO:GO:0030512
GeneTree:ENSGT00630000089849 OMA:LWQTTVG EMBL:FP325218
Ensembl:ENSSSCT00000023218 Uniprot:I3LNC4
Length = 363
Score = 206 (77.6 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 67/255 (26%), Positives = 121/255 (47%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
TF+ H V ++D+ A+ + D KVW SG L L AH V ++ F++D
Sbjct: 67 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTL--AHKHIVKTVDFTQD 124
Query: 319 GSQILSTSFDSTARIHGLKSGKLL-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ +L+ D RI+ L + KE GHSS + A++ ++ ++++A D TV++WD
Sbjct: 125 SNYLLTGGQDKLLRIYDLNKPEAEPKEISGHSSGIKKALWCSEDKQILSAD-DKTVRLWD 183
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 437
+ +++ + SV+S+ P+ + +V+ S + + +KSF +
Sbjct: 184 HATMTEVKSLN-------FNMSVSSMEYIPEG-EILVITYGRSIAFHSAISLDPIKSFEA 235
Query: 438 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 497
+A + P+ E++ GED LY + + SG+ K H + V P
Sbjct: 236 P----ATINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGE 291
Query: 498 LLATYGEDCTMKLWK 512
L A+ ED T++LW+
Sbjct: 292 LYASGSEDGTLRLWQ 306
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 211 (79.3 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 54/174 (31%), Positives = 84/174 (48%)
Query: 225 GQFLVSCSFDGFIEVVWD---------YLSGKLKKDLQ-YQADETFMM-----HDETVLC 269
G F + + G VWD + SG + + + D T+ + H V C
Sbjct: 372 GSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDC 431
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
++F +S LA+GS D +++W + G +R L H V SL FS +G + S D
Sbjct: 432 VKFHPNSNYLATGSTDKTVRLWSAQQGNSVR-LFTGHRGPVLSLSFSPNGKYLASAGEDQ 490
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
++ L SG L KE RGH+ + F+ D + +AS D +V+VWD++ST C
Sbjct: 491 RLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCC 544
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + +C +F P+ +L + S D + + W G + F H VL +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRL-WSAQQGNSVR--------LFTGHRGPVLSL 474
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
FS + + LAS +D ++K+W + SG + L R H++ +TSL FS D I S S D++
Sbjct: 475 SFSPNGKYLASAGEDQRLKLWDLASGTLFKEL-RGHTDSITSLAFSPDSGLIASASMDNS 533
Query: 331 ARIHGLKS 338
R+ ++S
Sbjct: 534 VRVWDIRS 541
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 55/188 (29%), Positives = 79/188 (42%)
Query: 220 RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 279
RF D L+SCS D I WD G + YQ H V ++ S S
Sbjct: 349 RFLADSSGLLSCSEDMSIRY-WDL--GSFTNTVLYQG------HAYPVWDVDISPFSLYF 399
Query: 280 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 339
ASGS D ++W LR + H V + F + + + + S D T R+ + G
Sbjct: 400 ASGSHDRTARLWSFDRTYPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQG 458
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 399
++ F GH V F+ +G + +A D +K+WDL S FK LRG S
Sbjct: 459 NSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTL---FKE---LRGHTDS 512
Query: 400 VNSVHLFP 407
+ S+ P
Sbjct: 513 ITSLAFSP 520
Score = 150 (57.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 53/212 (25%), Positives = 94/212 (44%)
Query: 301 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 360
++ R H V S F D S +LS S D + R L S ++GH+ V D +
Sbjct: 336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPF 395
Query: 361 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 420
+ S D T ++W T L+ + G A V+ V P N +++ +
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYA------GHLADVDCVKFHP-NSNYLATGSTDK 448
Query: 421 SIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 479
++ + + Q G V+ F+ G R G ++ SP G+++ GED+ L + SG L
Sbjct: 449 TVRLWSAQQGNSVRLFT-GHR--GPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKE 505
Query: 480 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
++ H + + P L+A+ D ++++W
Sbjct: 506 LRGHTDSITSLAFSPDSGLIASASMDNSVRVW 537
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 58/242 (23%), Positives = 106/242 (43%)
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
E S DS++LA+G + IK+W +RS + L+ H + + + D + D+T
Sbjct: 275 EISSDSKLLAAGFDNSCIKLWSLRSKK-LK--SEPHHVDTSRIRLACDTLEEEENEEDNT 331
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS-TDCLQTFKP 389
G +K RGH V F D S +++ S D +++ WDL S T+ +
Sbjct: 332 --------GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 383
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 449
P+ D ++ L+ + H ++T+ ++ + ++ ++ G D V
Sbjct: 384 AYPV--WDVDISPFSLYFASGSH----DRTARLWSFD-RTYPLRIYA-GHLADVDCVK-- 433
Query: 450 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 509
P ++ D+ + +S Q G L H V+ ++ P+ LA+ GED +K
Sbjct: 434 FHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLK 493
Query: 510 LW 511
LW
Sbjct: 494 LW 495
Score = 57 (25.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 23/88 (26%), Positives = 39/88 (44%)
Query: 172 QHQGLLPPGTQFDLFRGTAAMK--QD----VEDMYP--TTLSHTIKFGTKSHAECARFSP 223
++ L PP + + AA++ Q+ V+D P TT+ + T+ A S
Sbjct: 219 ENSSLEPPEVPSPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISS 278
Query: 224 DGQFLVSCSFDGFIEVVWDYLSGKLKKD 251
D + L++ FD +W S KLK +
Sbjct: 279 DSK-LLAAGFDNSCIKLWSLRSKKLKSE 305
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 211 (79.3 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 47/132 (35%), Positives = 73/132 (55%)
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE-GVTSLV 314
A F HD V ++FS S +LA+G D ++K+W + +C + + S G+TS+
Sbjct: 330 AMSVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIE 389
Query: 315 FSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
F GS +L+ S D +RI + +L GHS V A F D +R+V+ S D T+K
Sbjct: 390 FDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLK 449
Query: 375 VWDLKSTDCLQT 386
+WDL+S C++T
Sbjct: 450 LWDLRSKVCIKT 461
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 64/249 (25%), Positives = 117/249 (46%)
Query: 267 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS 326
+ IEF L + S D ++W + + LR HS V S F D ++I+S S
Sbjct: 385 ITSIEFDSAGSYLLAASNDFASRIWTVDDYR-LRHTLTGHSGKVLSAKFLLDNARIVSGS 443
Query: 327 FDSTARIHGLKSGKLLKE-FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 385
D T ++ L+S +K F G S ND + T V++ D ++ WD++S ++
Sbjct: 444 HDRTLKLWDLRSKVCIKTVFAGSSC--NDIVCTEQC--VMSGHFDKKIRFWDIRSESIVR 499
Query: 386 TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSS-GKREGG 443
+ L G + ++ L P+ + ++ C++ + I+ L+ V+ +FS+ G + G
Sbjct: 500 EME----LLG---KITALDLNPERTE-LLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGS 551
Query: 444 DFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM-KVHEKDVIGVTHHPHRNLLATY 502
D+ A SP G ++ + +LY ++ SGK+E ++ K H + V P + + T
Sbjct: 552 DWTRAVFSPDGSYVAAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINAVAWSPAGSHVVTV 611
Query: 503 GEDCTMKLW 511
+ LW
Sbjct: 612 DKGSKAVLW 620
Score = 146 (56.5 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 62/252 (24%), Positives = 104/252 (41%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G+ + F G +L++ S D F +W D Y+ T H VL
Sbjct: 380 GSNAGITSIEFDSAGSYLLAASND-FASRIWTV-------D-DYRLRHTLTGHSGKVLSA 430
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F D+ + SGS D +K+W +RS C++ + S +V + ++S FD
Sbjct: 431 KFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSS--CNDIVCTEQC--VMSGHFDKK 486
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTN-DGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
R ++S +++E A+ N + + +++ S D +K+ DL+ QTF
Sbjct: 487 IRFWDIRSESIVREMELLGKIT--ALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSA 544
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-LQGQVVKSFSSGKREGGDFVAA 448
P G D + +V F + ++ S+YI L G+V K S K A
Sbjct: 545 PGFKCGSDWT-RAV--FSPDGSYVAAGAAEGSLYIWNVLSGKVEKVLS--KHHSSSINAV 599
Query: 449 CVSPKGEWIYCV 460
SP G + V
Sbjct: 600 AWSPAGSHVVTV 611
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 205 (77.2 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 71/299 (23%), Positives = 127/299 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + C +F P+G L S FD I ++W+ D A T H V+ +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLI-LLWNVYG-----DCDNYA--TLKGHSGAVMEL 116
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDS 329
++ D ML S S D + VW +G+ ++RL + H+ V S +R G Q++ T S D
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFK 388
T ++ ++ ++ F+ ++Y A+ ND S ++++ D +KVWDL+ T +
Sbjct: 176 TVKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 389 P-PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVA 447
+ G S +L D+ V + + + + V+ F +
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTV---RVWDVRPFAPKERCVRIFQGNVHNFEKNLL 290
Query: 448 ACV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
C SP G I DR +Y + S ++ + + H + V HP ++ + D
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 48/222 (21%), Positives = 96/222 (43%)
Query: 292 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSS 350
R S Q L H V F +GS + S FD + + +GHS
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 111
Query: 351 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 410
V + + DGS + +AS+D TV VWD ++ + ++ L+G + VNS + + P
Sbjct: 112 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR------LKGHTSFVNSCYPARRGP 165
Query: 411 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 469
+ + ++ + ++ + +++F + + +A + + I G D ++ +
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ----VLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 470 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ KL + M+ H V G++ + L + D T+++W
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 210 (79.0 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 109/522 (20%), Positives = 218/522 (41%)
Query: 5 IEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAILPQVA 64
I + ++I+ + +T L+ E +SL+ +I+ F+ + G+WD + +
Sbjct: 63 IRKSEFVRIITRALYSLGYDKTGAMLEEESGISLHN-STIKLFLQQVKDGKWDQSVKTLH 121
Query: 65 QLKLPRNKLED-----LYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEH 119
++ P K L EQ LE +++ ++ A LR M ++ +
Sbjct: 122 RIGFPDEKAVKAASFLLLEQKFLEFLKVEKIADALRTLRNE--MAPLRINTKRVHELASS 179
Query: 120 LLVRTYFDAHEAY---QDSTKEXXXXXXXXXXXXEVSVV-PPSRLMALIGQALKWQQHQG 175
L+ + F +H ++S SV+ P RL L+ +L Q+
Sbjct: 180 LISPSSFISHTTSTPGKESVNSRSKVLEELQTLLPASVIIPEKRLECLVENSLHIQRDSC 239
Query: 176 LLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDG 235
+ DL + Q + P+ + ++ T +FS +G++L S S D
Sbjct: 240 VFHNTLDSDL--SLYSDHQCGKHQIPSQTAQILESHT-DEVWFLQFSHNGKYLASSSKDQ 296
Query: 236 FIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIR 294
++W+ + D T + H + V+ I +S D ++L G+++ I+ W +
Sbjct: 297 -TAIIWE-----ISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEE-VIRRWDVD 349
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSY-VN 353
SG C+ E+ + S + DG I++ D + + L G+ + ++G + V+
Sbjct: 350 SGDCVHMYEKGGISPI-SCGWYPDGQGIIAGMTDRSICMWDL-DGREKECWKGQRTQKVS 407
Query: 354 DAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHI 413
D T+DG +V+ D + ++D ++T L + + S L N +I
Sbjct: 408 DIAMTDDGKWLVSVCKDSVISLFDREAT--------VERLIEEEDMITSFSLSNDNK-YI 458
Query: 414 VVCNKTSSIYIMTLQG--QVVKSFSSGKREGGDFVAACVSP-KGEWIYCVGEDRNLYCFS 470
+V I + ++G ++V + KR + +C K +I ED +Y +
Sbjct: 459 LVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRF-IIRSCFGGYKQAFIASGSEDSQVYIWH 517
Query: 471 HQSGKLEHLMKVHEKDVIGVTHHP-HRNLLATYGEDCTMKLW 511
+GKL + H V V+ P + ++LA+ +D T+++W
Sbjct: 518 RSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 210 (79.0 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 46/128 (35%), Positives = 72/128 (56%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE-GVTSLVFSRD 318
F HD V ++FS S +LA+G D ++K+W + +C + + S G+TS+ F
Sbjct: 318 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSA 377
Query: 319 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
GS +L+ S D +RI + +L GHS V A F D +R+V+ S D T+K+WDL
Sbjct: 378 GSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 437
Query: 379 KSTDCLQT 386
+S C++T
Sbjct: 438 RSKVCIKT 445
Score = 168 (64.2 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 66/273 (24%), Positives = 121/273 (44%)
Query: 220 RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 279
+FSP + L + D +++ W+ K +++ + + + IEF L
Sbjct: 329 QFSPGSRLLATGGMDRRVKL-WEVFGDKC----EFKG--SLSGSNAGITSIEFDSAGSYL 381
Query: 280 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 339
+ S D ++W + + LR HS V S F D ++I+S S D T ++ L+S
Sbjct: 382 LAASNDFASRIWTVDDYR-LRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 440
Query: 340 KLLKE-FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK-STDCLQTFKPPPPLRGGD 397
+K F G S ND + T V++ D ++ WD++ +T L + L G
Sbjct: 441 VCIKTVFAGSSC--NDIVCTEQC--VMSGHFDKKIRFWDIRYNTRSLVSLGQ---LLGKQ 493
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSS-GKREGGDFVAACVSPKGE 455
+ F ++ C++ + I+ L+ V+ +FS+ G + G D+ SP G
Sbjct: 494 TASR----FNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRVVFSPDGS 549
Query: 456 WIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 488
++ + +LY +S SGK+E ++ H I
Sbjct: 550 YVAAGSAEGSLYVWSVLSGKVEKVLSKHHSSPI 582
Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 58/246 (23%), Positives = 101/246 (41%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G+ + F G +L++ S D F +W D Y+ T H VL
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASND-FASRIWTV-------D-DYRLRHTLTGHSGKVLSA 414
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F D+ + SGS D +K+W +RS C++ + S +V + ++S FD
Sbjct: 415 KFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSS--CNDIVCTEQC--VMSGHFDKK 470
Query: 331 ARIHGLK-SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
R ++ + + L + F + + +++ S D +K+ DL+ QTF
Sbjct: 471 IRFWDIRYNTRSLVSLGQLLGKQTASRFNPERTELLSCSRDDLLKIIDLRINAVRQTFSA 530
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-LQGQVVKSFSSGKREGGDFVAA 448
P G D + V +F + ++ + S+Y+ + L G+V K S K A
Sbjct: 531 PGFKCGSDWT--RV-VFSPDGSYVAAGSAEGSLYVWSVLSGKVEKVLS--KHHSSPINAV 585
Query: 449 CVSPKG 454
SP G
Sbjct: 586 AWSPSG 591
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 210 (79.0 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 46/128 (35%), Positives = 72/128 (56%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE-GVTSLVFSRD 318
F HD V ++FS S +LA+G D ++K+W + +C + + S G+TS+ F
Sbjct: 318 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSA 377
Query: 319 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
GS +L+ S D +RI + +L GHS V A F D +R+V+ S D T+K+WDL
Sbjct: 378 GSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 437
Query: 379 KSTDCLQT 386
+S C++T
Sbjct: 438 RSKVCIKT 445
Score = 183 (69.5 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 63/249 (25%), Positives = 116/249 (46%)
Query: 267 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS 326
+ IEF L + S D ++W + + LR HS V S F D ++I+S S
Sbjct: 369 ITSIEFDSAGSYLLAASNDFASRIWTVDDYR-LRHTLTGHSGKVLSAKFLLDNARIVSGS 427
Query: 327 FDSTARIHGLKSGKLLKE-FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 385
D T ++ L+S +K F G S ND + T V++ D ++ WD++S ++
Sbjct: 428 HDRTLKLWDLRSKVCIKTVFAGSSC--NDIVCTEQC--VMSGHFDKKIRFWDIRSESIVR 483
Query: 386 TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSS-GKREGG 443
+ L G + ++ L P+ + ++ C++ + I+ L+ V+ +FS+ G + G
Sbjct: 484 EME----LLG---KITALDLNPERTE-LLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGS 535
Query: 444 DFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM-KVHEKDVIGVTHHPHRNLLATY 502
D+ SP G ++ + +LY +S SGK+E ++ K H + V P + + +
Sbjct: 536 DWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVAWSPSGSHVVSV 595
Query: 503 GEDCTMKLW 511
+ LW
Sbjct: 596 DKGSKAVLW 604
Score = 156 (60.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 63/252 (25%), Positives = 108/252 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G+ + F G +L++ S D F +W D Y+ T H VL
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASND-FASRIWTV-------D-DYRLRHTLTGHSGKVLSA 414
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F D+ + SGS D +K+W +RS C++ + S +V + ++S FD
Sbjct: 415 KFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSS--CNDIVCTEQC--VMSGHFDKK 470
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTN-DGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
R ++S +++E A+ N + + +++ S D +K+ DL+ QTF
Sbjct: 471 IRFWDIRSESIVREMELLGKIT--ALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSA 528
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-LQGQVVKSFSSGKREGGDFVAA 448
P G D + V +F + ++ + S+YI + L G+V K S K+ G A
Sbjct: 529 PGFKCGSDWT--RV-VFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLS--KQHGSSINAV 583
Query: 449 CVSPKGEWIYCV 460
SP G + V
Sbjct: 584 AWSPSGSHVVSV 595
Score = 119 (46.9 bits), Expect = 0.00082, P = 0.00082
Identities = 45/181 (24%), Positives = 78/181 (43%)
Query: 201 PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETF 260
PTT + I +FSP + L + D +++ W+ K +++ +
Sbjct: 311 PTT-AMCIFDAHDGEVNAVQFSPGSRLLATGGMDRRVKL-WEVFGDKC----EFKG--SL 362
Query: 261 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGS 320
+ + IEF L + S D ++W + + LR HS V S F D +
Sbjct: 363 SGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYR-LRHTLTGHSGKVLSAKFLLDNA 421
Query: 321 QILSTSFDSTARIHGLKSGKLLKE-FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
+I+S S D T ++ L+S +K F G S ND + T V++ D ++ WD++
Sbjct: 422 RIVSGSHDRTLKLWDLRSKVCIKTVFAGSSC--NDIVCTEQC--VMSGHFDKKIRFWDIR 477
Query: 380 S 380
S
Sbjct: 478 S 478
>RGD|1311114 [details] [associations]
symbol:Strap "serine/threonine kinase receptor associated
protein" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005102 "receptor binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0030054 "cell
junction" evidence=ISO] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1311114 GO:GO:0005739 GO:GO:0005886 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0030512 HSSP:P63005 GeneTree:ENSGT00630000089849 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M
EMBL:BC083714 IPI:IPI00364585 RefSeq:NP_001011969.1
UniGene:Rn.228807 ProteinModelPortal:Q5XIG8 IntAct:Q5XIG8
STRING:Q5XIG8 PRIDE:Q5XIG8 Ensembl:ENSRNOT00000009923 GeneID:297699
KEGG:rno:297699 UCSC:RGD:1311114 InParanoid:Q5XIG8 NextBio:642559
Genevestigator:Q5XIG8 Uniprot:Q5XIG8
Length = 350
Score = 204 (76.9 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 66/255 (25%), Positives = 122/255 (47%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
TF+ H V ++D+ A+ + D KVW SG L L AH V ++ F++D
Sbjct: 54 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTL--AHKHIVKTVDFTQD 111
Query: 319 GSQILSTSFDSTARIHGLKSGKLL-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ +L+ D RI+ L + KE GH+S + A++ ++ ++++A D TV++WD
Sbjct: 112 SNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQILSAD-DKTVRLWD 170
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 437
+ +++ + SV+S+ P+ + +V+ S + + + +KSF +
Sbjct: 171 HATMTEVKSLN-------FNMSVSSMEYIPEG-EILVITYGRSIAFHSAVSLEPIKSFEA 222
Query: 438 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 497
+A + P+ E++ GED LY + + SG+ K H + V P
Sbjct: 223 P----ATINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGE 278
Query: 498 LLATYGEDCTMKLWK 512
L A+ ED T++LW+
Sbjct: 279 LYASGSEDGTLRLWQ 293
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 213 (80.0 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 62/250 (24%), Positives = 113/250 (45%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G S + F+ + +++ + G I++ WD K+ + F H +
Sbjct: 56 GHTSPVDSVAFNSEEVLVLAGASSGVIKL-WDLEESKMVR--------AFTGHRSNCSAV 106
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
EF E LASGS D ++VW R C++ + H+ G++++ FS DG ++S D+
Sbjct: 107 EFHPFGEFLASGSSDTNLRVWDTRKKGCIQTY-KGHTRGISTIEFSPDGRWVVSGGLDNV 165
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
++ L +GKLL EF+ H + F + T S+D TVK WDL++ + + T +P
Sbjct: 166 VKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPE 225
Query: 391 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKS-FSSGKREGGDFVAAC 449
V ++ P + C + + + + + + G GDF C
Sbjct: 226 A------TGVRAIAFHPDG--QTLFCGLDDGLKVYSWEPVICRDGVDMGWSTLGDF---C 274
Query: 450 VSPKGEWIYC 459
++ +G++I C
Sbjct: 275 IN-EGKFIGC 283
Score = 164 (62.8 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 60/266 (22%), Positives = 115/266 (43%)
Query: 254 YQADETFMMHDETVLCIEFSRD-SEMLASGSQDGKIKVWRIRSGQCLRRLERA-HSEGVT 311
Y+ E F+ H V C+ + S +L +G D K+ +W I G+ + H+ V
Sbjct: 6 YKLQE-FVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSI--GKTTSPMSLCGHTSPVD 62
Query: 312 SLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDC 371
S+ F+ + +L+ + ++ L+ K+++ F GH S + F G + + SSD
Sbjct: 63 SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDT 122
Query: 372 TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQ 430
++VWD + C+QT+K G ++++ P +V + + + L G+
Sbjct: 123 NLRVWDTRKKGCIQTYK------GHTRGISTIEFSPDGR-WVVSGGLDNVVKVWDLTAGK 175
Query: 431 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLEHLMKVHEKDVIG 489
++ F K G + P E++ G DR + + ++ +L + V
Sbjct: 176 LLHEF---KCHEGPIRSLDFHPL-EFLLATGSADRTVKFWDLETFELIGTTRPEATGVRA 231
Query: 490 VTHHPHRNLLATYGEDCTMKL--WKP 513
+ HP L G D +K+ W+P
Sbjct: 232 IAFHPDGQTLFC-GLDDGLKVYSWEP 256
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 214 (80.4 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 89/310 (28%), Positives = 140/310 (45%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 278
A FS D Q + SC D ++V + SG+ + L+ A HD+ +LC FS D +
Sbjct: 620 ACFSRDRQRIASCGADKTLQV-FKAESGE--RLLEISA------HDDEILCCTFSADDKY 670
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS-RDGSQILSTSFD-----STAR 332
+A+ S D K+K+W R+G+CL E H+E V F+ R G +L+T D +T +
Sbjct: 671 VATCSADKKVKIWNSRTGKCLYVYEE-HTEQVNCCQFNNRRGQYLLATCSDDTYIKNTVQ 729
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 392
+ LK GH + V+ F+ + + + S+D TVK+W++ S + L+T +
Sbjct: 730 LWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDF 789
Query: 393 LRGGDASVNSVHLFPK------NPDHIVVC--NKTSSIYIMT--LQGQVVKSFSSGKREG 442
R D + V + K + D I+V NK + T L QV+ S S +
Sbjct: 790 FRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHS-TIQY 848
Query: 443 GDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATY 502
DF A +C E N+ S + H VH VT +L T
Sbjct: 849 CDFCAGDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVH-----CVTFSSDGSLFLTS 903
Query: 503 GEDCTMKLWK 512
ED T+++W+
Sbjct: 904 SEDQTIRIWE 913
Score = 189 (71.6 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 55/191 (28%), Positives = 89/191 (46%)
Query: 213 KSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMM--HDETVLCI 270
++ + RF+ D Q L+S + D I+V W++ Q +E + H E +
Sbjct: 1009 RTSVQHCRFTTDCQTLISSAHDAVIQV-WNW-----------QLNECVFLKGHKEAIKDF 1056
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
F +S++L S S DG +KVW I +G+ + H V S S DGS+ STS D T
Sbjct: 1057 AFLENSKLL-SWSFDGTVKVWNITTGKTEKDFA-CHRGAVLSCAVSPDGSRFSSTSADKT 1114
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ----- 385
A+I +S +L E +GH + V + F+ + T +++WD+ + + L
Sbjct: 1115 AKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSV 1174
Query: 386 TFKPPPPLRGG 396
T P GG
Sbjct: 1175 TVDEEEPTHGG 1185
Score = 188 (71.2 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 60/243 (24%), Positives = 123/243 (50%)
Query: 195 DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWD-YLSGKLK---- 249
D++D Y +T+ FG + RFSP+ ++ SCS DG +++ W+ + + +L+
Sbjct: 732 DLKDKY---CRNTM-FGHVNAVSHCRFSPNDDYIASCSTDGTVKL-WNVHSANELRTIEI 786
Query: 250 KDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG 309
KD ADE + V C +SR S+ + +++ K+ ++ + + L ++ +H
Sbjct: 787 KDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKN-KLLLFDVTTSNLLTQVIISHHST 845
Query: 310 VTSLVFSRDGSQILSTSFDSTA-RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 368
+ F G ++++ + + + +KS + + RGH+S+V+ F++DGS +T+S
Sbjct: 846 IQYCDFCA-GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSS 904
Query: 369 SDCTVKVWDL----KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN-KTSSIY 423
D T+++W+ KS+D + + G+ + +++ N HI + N T SI
Sbjct: 905 EDQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIY----NQKHIQLINGNTDSII 960
Query: 424 IMT 426
+ T
Sbjct: 961 MQT 963
Score = 182 (69.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 55/192 (28%), Positives = 88/192 (45%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE 277
C S D +F +G I+V+ L G++ + A T + H C F+ D +
Sbjct: 972 CCCLSEDLKFAAFGQENGAIKVL-RLLDGRVLTSRE--AYRTSVQH-----C-RFTTDCQ 1022
Query: 278 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 337
L S + D I+VW + +C+ + H E + F + S++LS SFD T ++ +
Sbjct: 1023 TLISSAHDAVIQVWNWQLNECV--FLKGHKEAIKDFAFL-ENSKLLSWSFDGTVKVWNIT 1079
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
+GK K+F H V + DGSR + S+D T K+W +S+ L L+G +
Sbjct: 1080 TGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHE------LKGHE 1133
Query: 398 ASVNSVHLFPKN 409
A V P N
Sbjct: 1134 ACVRCSAFSPSN 1145
Score = 169 (64.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 73/288 (25%), Positives = 117/288 (40%)
Query: 243 YLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL 302
YL KK L+ + H + V FSRD + +AS D ++V++ SG+ L +
Sbjct: 593 YLEWINKKSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEI 652
Query: 303 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS 362
AH + + FS D + + S D +I ++GK L + H+ VN F N
Sbjct: 653 S-AHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRG 711
Query: 363 R--VVTASSDC----TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSV-HL-FPKNPDHIV 414
+ + T S D TV++WDLK C T + G VN+V H F N D+I
Sbjct: 712 QYLLATCSDDTYIKNTVQLWDLKDKYCRNT------MFG---HVNAVSHCRFSPNDDYIA 762
Query: 415 VCNKTSSIYIMTLQGQ------VVKSFSSGKREGGDFVAACV-----SPKGEWIYCVGED 463
C+ ++ + + +K F E D V V S + I V ++
Sbjct: 763 SCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKN 822
Query: 464 RNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ L S L ++ H + L+A C+++LW
Sbjct: 823 KLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSHCSIELW 870
Score = 168 (64.2 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 66/225 (29%), Positives = 101/225 (44%)
Query: 213 KSHAECAR-FS-PDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
K H E + F+ + L+S SFDG ++V W+ +GK +KD F H VL
Sbjct: 1047 KGHKEAIKDFAFLENSKLLSWSFDGTVKV-WNITTGKTEKD--------FACHRGAVLSC 1097
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS- 329
S D +S S D K+W S L L + H V FS +++L+T D
Sbjct: 1098 AVSPDGSRFSSTSADKTAKIWSFESSSVLHEL-KGHEACVRCSAFS-PSNKLLATGDDKG 1155
Query: 330 TARIHGLKSGKLL---------KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
RI + +G+LL +E H +V D F+ D +V SS +K WD+ +
Sbjct: 1156 DIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLV--SSGGYLKWWDVTT 1213
Query: 381 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM 425
+ LQTF G ++ S+H+ P N D V + +Y++
Sbjct: 1214 GESLQTF-----YTNG-TNLKSIHVSP-NFDVYVTVDNLGILYVL 1251
Score = 123 (48.4 bits), Expect = 0.00074, P = 0.00074
Identities = 31/115 (26%), Positives = 59/115 (51%)
Query: 264 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
+ + C S D + A G ++G IKV R+ G+ L E A+ V F+ D ++
Sbjct: 967 ESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSRE-AYRTSVQHCRFTTDCQTLI 1025
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
S++ D+ ++ + + + +GH + D F + S++++ S D TVKVW++
Sbjct: 1026 SSAHDAVIQVWNWQLNECVF-LKGHKEAIKDFAFL-ENSKLLSWSFDGTVKVWNI 1078
Score = 114 (45.2 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 38/132 (28%), Positives = 61/132 (46%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS--RD 275
C FS D +++ +CS D +++ W+ +GK Y +E H E V C +F+ R
Sbjct: 661 CCTFSADDKYVATCSADKKVKI-WNSRTGKCL----YVYEE----HTEQVNCCQFNNRRG 711
Query: 276 SEMLASGSQDGKIK----VWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 331
+LA+ S D IK +W ++ C R H V+ FS + I S S D T
Sbjct: 712 QYLLATCSDDTYIKNTVQLWDLKDKYC-RNTMFGHVNAVSHCRFSPNDDYIASCSTDGTV 770
Query: 332 RIHGLKSGKLLK 343
++ + S L+
Sbjct: 771 KLWNVHSANELR 782
Score = 113 (44.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 40/177 (22%), Positives = 78/177 (44%)
Query: 336 LKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRG 395
L G++L + + V FT D +++++ D ++VW+ + +C+ F L+G
Sbjct: 996 LLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECV--F-----LKG 1048
Query: 396 GDASVNSVHLFPKNPDHIVVC-NKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 454
++ F +N + + T ++ +T G+ K F+ + G ++ VSP G
Sbjct: 1049 HKEAIKDF-AFLENSKLLSWSFDGTVKVWNITT-GKTEKDFACHR---GAVLSCAVSPDG 1103
Query: 455 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
D+ +S +S + H +K HE V P LLAT + +++W
Sbjct: 1104 SRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIW 1160
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 222 (83.2 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 65/201 (32%), Positives = 96/201 (47%)
Query: 189 TAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQ----FLVSCSFDGFIEVVWDYL 244
TA ++ + + P+ + K K AE L S S D + + WD
Sbjct: 667 TALIRSNFSEDLPSWICQLPKVNEKWGAELQTLEGHSNSVWAVLASGSDDETVRL-WDPA 725
Query: 245 SGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLER 304
+G L++ L+ H VL + FS D +LASGS D +++W +G L++ R
Sbjct: 726 TGSLQQTLEG--------HSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGS-LQQTLR 776
Query: 305 AHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRV 364
HS V S+ FS DG + S SFD T R+ +G L + RGHS V F+ DG +
Sbjct: 777 GHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLL 836
Query: 365 VTASSDCTVKVWDLKSTDCLQ 385
+ S D TV++WD +T LQ
Sbjct: 837 ASGSFDKTVRLWD-PATGTLQ 856
Score = 197 (74.4 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 50/130 (38%), Positives = 70/130 (53%)
Query: 278 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 337
+LASGS D +++W +G + LE HS V S+ FS DG + S SFD T R+
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLE-GHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPA 767
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
+G L + RGHS++V F+ DG + + S D TV++WD +T LQ LRG
Sbjct: 768 TGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWD-PATGSLQQ-----TLRGHS 821
Query: 398 ASVNSVHLFP 407
+V SV P
Sbjct: 822 DTVRSVAFSP 831
Score = 153 (58.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 45/127 (35%), Positives = 66/127 (51%)
Query: 203 TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMM 262
+L T++ G + FSPDG+ L S SFD + + WD +G L+ +T
Sbjct: 770 SLQQTLR-GHSNWVRSVAFSPDGRLLASGSFDKTVRL-WDPATGSLQ--------QTLRG 819
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H +TV + FS D +LASGS D +++W +G + L + VT L FS+DGS I
Sbjct: 820 HSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGT--VTELQFSQDGSYI 877
Query: 323 LSTSFDS 329
ST+ S
Sbjct: 878 -STNLGS 883
Score = 37 (18.1 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 28 QTLQNECQVSLNTVDSIETFVADIN 52
+T+Q+ Q + +++S T ADIN
Sbjct: 524 KTMQSHLQKDICSLESPGTRRADIN 548
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 209 (78.6 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 82/320 (25%), Positives = 131/320 (40%)
Query: 201 PTTLSHTIKFGTKSHAECARFSP-DGQFLVSCSFDGFIEVVWD-YLSGKLKKDLQYQADE 258
P L HT TK RF P G L+S D +++ WD Y SGK +
Sbjct: 271 PKRLVHTWSGHTKG-VSAIRFFPKQGHLLLSAGMDCKVKI-WDVYNSGKCMR-------- 320
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
T+M H + V I FS D + D IK W +GQ + V L D
Sbjct: 321 TYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDD 380
Query: 319 GSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
IL + + +G++ +E+ H VN F ++ R VT+S D +++VW+
Sbjct: 381 KQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 440
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 437
++ P S+ S+ + P N + + + + I I + + + +
Sbjct: 441 FGIPVVIKYISEPHM-----HSMPSISVHP-NGNWLAAQSLDNQILIYSTRERF--QLNK 492
Query: 438 GKREGGDFVA--AC---VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 492
KR G VA AC SP G ++ + + + +S K+ +K H IG
Sbjct: 493 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEW 552
Query: 493 HP-HRNLLATYGEDCTMKLW 511
HP ++ +AT G D +K W
Sbjct: 553 HPLEQSKVATCGWDGLIKYW 572
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 185 (70.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 58/215 (26%), Positives = 97/215 (45%)
Query: 176 LLPP---GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCS 232
LLP + F+L R V D+ T H K +++P+G+ L+ S
Sbjct: 96 LLPSLAYSSSFNLNRRNNKNNLAVLDLQ-TKFVHLSSNKVKHTINTVKWTPEGRRLLVAS 154
Query: 233 FDGFIEVVWDYLSGKLKKDLQYQADETFMM-HDETVLCIEFSRDSEMLASGSQDGKIKVW 291
G +W+ ++ ET M H+ +L +++S E L SG Q+G +K W
Sbjct: 155 HSGEF-TLWNGMTFNF---------ETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYW 204
Query: 292 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSY 351
+ + + AH+ GV + FS + S+ L+ DS +I +GK + GH
Sbjct: 205 QPNFNN-VNNIS-AHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWE 262
Query: 352 VNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 386
V A + + +V+ S D VK+WD +S +C+ T
Sbjct: 263 VKSADWHPNLGLIVSGSKDNLVKLWDPRSANCVST 297
Score = 106 (42.4 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 214 SHAECAR---FSP-DGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLC 269
+HA R FSP D +FL +C D I++ W++ +GK + T H V
Sbjct: 216 AHANGVRDIAFSPNDSKFL-TCGDDSAIKI-WNFNNGK--------EERTLSGHHWEVKS 265
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL--STSF 327
++ + ++ SGS+D +K+W RS C+ L V F +G+ L S S
Sbjct: 266 ADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLH-GFKHTVNKTRFQPNGTARLLASVSR 324
Query: 328 DSTARIHGLKSGK 340
D + RI L++ K
Sbjct: 325 DRSCRIFDLRTMK 337
Score = 69 (29.3 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 483 HEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
HEK + V +HP +LL T G D T + W
Sbjct: 415 HEKAIHAVEYHPLGHLLCTAGSDKTARFW 443
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 185 (70.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 58/215 (26%), Positives = 97/215 (45%)
Query: 176 LLPP---GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCS 232
LLP + F+L R V D+ T H K +++P+G+ L+ S
Sbjct: 96 LLPSLAYSSSFNLNRRNNKNNLAVLDLQ-TKFVHLSSNKVKHTINTVKWTPEGRRLLVAS 154
Query: 233 FDGFIEVVWDYLSGKLKKDLQYQADETFMM-HDETVLCIEFSRDSEMLASGSQDGKIKVW 291
G +W+ ++ ET M H+ +L +++S E L SG Q+G +K W
Sbjct: 155 HSGEF-TLWNGMTFNF---------ETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYW 204
Query: 292 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSY 351
+ + + AH+ GV + FS + S+ L+ DS +I +GK + GH
Sbjct: 205 QPNFNN-VNNIS-AHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWE 262
Query: 352 VNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 386
V A + + +V+ S D VK+WD +S +C+ T
Sbjct: 263 VKSADWHPNLGLIVSGSKDNLVKLWDPRSANCVST 297
Score = 106 (42.4 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 214 SHAECAR---FSP-DGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLC 269
+HA R FSP D +FL +C D I++ W++ +GK + T H V
Sbjct: 216 AHANGVRDIAFSPNDSKFL-TCGDDSAIKI-WNFNNGK--------EERTLSGHHWEVKS 265
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL--STSF 327
++ + ++ SGS+D +K+W RS C+ L V F +G+ L S S
Sbjct: 266 ADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLH-GFKHTVNKTRFQPNGTARLLASVSR 324
Query: 328 DSTARIHGLKSGK 340
D + RI L++ K
Sbjct: 325 DRSCRIFDLRTMK 337
Score = 69 (29.3 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 483 HEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
HEK + V +HP +LL T G D T + W
Sbjct: 415 HEKAIHAVEYHPLGHLLCTAGSDKTARFW 443
>UNIPROTKB|B4DNJ6 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9606 "Homo sapiens" [GO:0016301 "kinase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0030054 "cell
junction" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005739 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 GO:GO:0016301 HOGENOM:HOG000174258
HOVERGEN:HBG055228 OMA:LWQTTVG UniGene:Hs.504895 HGNC:HGNC:30796
ChiTaRS:STRAP EMBL:AC022073 EMBL:AK297942 IPI:IPI00294536
SMR:B4DNJ6 IntAct:B4DNJ6 STRING:B4DNJ6 Ensembl:ENST00000025399
UCSC:uc010shw.2 Uniprot:B4DNJ6
Length = 363
Score = 204 (76.9 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 79/299 (26%), Positives = 138/299 (46%)
Query: 222 SPDGQFLVS-CSFDGFIEVVWDYLSGKLK-KDLQYQADE-----TFMMHDETVLCIEFSR 274
+P G FL+S C G LSG+ K + Q D TF+ H V ++
Sbjct: 26 TPYGYFLISACKGAG---QHLPRLSGQHDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNK 82
Query: 275 DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIH 334
D+ A+ + D KVW SG L L AH V ++ F++D + +L+ D RI+
Sbjct: 83 DATKAATAAADFTAKVWDAVSGDELMTL--AHKHIVKTVDFTQDSNYLLTGGQDKLLRIY 140
Query: 335 GLKSGKLL-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPL 393
L + KE GH+S + A++ ++ ++++A D TV++WD + +++
Sbjct: 141 DLNKPEAEPKEISGHTSGIKKALWCSEDKQILSAD-DKTVRLWDHATMTEVKSLN----- 194
Query: 394 RGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPK 453
+ SV+S+ P+ + +V+ S + + +KSF + +A + P+
Sbjct: 195 --FNMSVSSMEYIPEG-EILVITYGRSIAFHSAVSLDPIKSFEAP----ATINSASLHPE 247
Query: 454 GEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
E++ GED LY + + SG+ K H + V P L A+ ED T++LW+
Sbjct: 248 KEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQ 306
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 209 (78.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 53/174 (30%), Positives = 84/174 (48%)
Query: 225 GQFLVSCSFDGFIEVVWD---------YLSGKLKKDLQ-YQADETFMM-----HDETVLC 269
G F + + G VWD + SG + + + D T+ + H V C
Sbjct: 372 GSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDC 431
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
++F +S LA+GS D +++W + G +R L H V SL FS +G + S D
Sbjct: 432 VKFHPNSNYLATGSTDKTVRLWSAQQGNSVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQ 490
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
++ L SG L KE RGH+ + F+ D + +AS D +V+VWD+++T C
Sbjct: 491 RLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYC 544
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 43/156 (27%), Positives = 75/156 (48%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + +C +F P+ +L + S D + + W G + F H VL +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRL-WSAQQGNSVR--------LFTGHRGPVLSL 474
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
FS + + LAS +D ++K+W + SG + L R H++ +TSL FS D I S S D++
Sbjct: 475 AFSPNGKYLASAGEDQRLKLWDLASGTLYKEL-RGHTDNITSLTFSPDSGLIASASMDNS 533
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 366
R+ +++ G SS + ++T S V++
Sbjct: 534 VRVWDIRNTYCSAPADGSSSELV-GVYTGQMSNVLS 568
Score = 157 (60.3 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 54/212 (25%), Positives = 96/212 (45%)
Query: 301 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 360
++ R H V S F D S +LS S D + R L S ++GH+ V D +
Sbjct: 336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPY 395
Query: 361 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 420
+ S D T ++W T L+ + G A V+ V P N +++ +
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYA------GHLADVDCVKFHP-NSNYLATGSTDK 448
Query: 421 SIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 479
++ + + Q G V+ F+ G R G ++ SP G+++ GED+ L + SG L
Sbjct: 449 TVRLWSAQQGNSVRLFT-GHR--GPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKE 505
Query: 480 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
++ H ++ +T P L+A+ D ++++W
Sbjct: 506 LRGHTDNITSLTFSPDSGLIASASMDNSVRVW 537
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 47/161 (29%), Positives = 69/161 (42%)
Query: 220 RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 279
RF D L+SCS D I WD G + YQ H V ++ S S
Sbjct: 349 RFLADSSGLLSCSEDMSIRY-WDL--GSFTNTVLYQG------HAYPVWDLDISPYSLYF 399
Query: 280 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 339
ASGS D ++W LR + H V + F + + + + S D T R+ + G
Sbjct: 400 ASGSHDRTARLWSFDRTYPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQG 458
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
++ F GH V F+ +G + +A D +K+WDL S
Sbjct: 459 NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 499
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 60/242 (24%), Positives = 106/242 (43%)
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
E S DS++LA+G + IK+W +RS + L+ H V+ + + D IL D
Sbjct: 275 EISPDSKLLAAGFDNSCIKLWSLRSKK-LK--SEPHQVDVSRIHLACD---ILEEEDDED 328
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS-TDCLQTFKP 389
+G +K RGH V F D S +++ S D +++ WDL S T+ +
Sbjct: 329 DN-----AGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 383
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 449
P+ D ++ L+ + H ++T+ ++ + ++ ++ G D V
Sbjct: 384 AYPV--WDLDISPYSLYFASGSH----DRTARLWSFD-RTYPLRIYA-GHLADVDCVK-- 433
Query: 450 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 509
P ++ D+ + +S Q G L H V+ + P+ LA+ GED +K
Sbjct: 434 FHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLK 493
Query: 510 LW 511
LW
Sbjct: 494 LW 495
Score = 138 (53.6 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 36/107 (33%), Positives = 57/107 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSP+G++L S D +++ WD SG L K+L+ H + + + FS DS ++A
Sbjct: 476 FSPNGKYLASAGEDQRLKL-WDLASGTLYKELRG--------HTDNITSLTFSPDSGLIA 526
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
S S D ++VW IR+ C + + SE V V++ S +LS F
Sbjct: 527 SASMDNSVRVWDIRNTYCSAPADGSSSELVG--VYTGQMSNVLSVQF 571
Score = 109 (43.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 52/223 (23%), Positives = 86/223 (38%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H V F DS L S S+D I+ W + S L + H+ V L S
Sbjct: 341 HCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV-LYQGHAYPVWDLDISPYSLYF 399
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
S S D TAR+ L+ + GH + V+ F + + + T S+D TV++W + +
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 383 CLQTFKPPP-PLRGGDASVNSVHLFPKNPDH-IVVCNKTSSIYIMTLQGQVVKSFSSGKR 440
++ F P+ S N +L D + + + S L+G S
Sbjct: 460 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 519
Query: 441 EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH 483
+A+ ++ + RN YC + G L+ V+
Sbjct: 520 PDSGLIASASMDNSVRVWDI---RNTYCSAPADGSSSELVGVY 559
Score = 74 (31.1 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 172 QHQGLLPPGTQFDLFRGTAAMK--QD----VEDMYP--TTLSHTIKFGTKSHAECARFSP 223
++ GL PP + + AA++ Q+ V+D P TT+ + T+ A SP
Sbjct: 219 ENNGLEPPDMPSPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISP 278
Query: 224 DGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQAD 257
D + L++ FD +W S KLK + +Q D
Sbjct: 279 DSK-LLAAGFDNSCIKLWSLRSKKLKSE-PHQVD 310
>ZFIN|ZDB-GENE-040426-1110 [details] [associations]
symbol:strap "serine/threonine kinase receptor
associated protein" species:7955 "Danio rerio" [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1110 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016301 HSSP:P16649
GeneTree:ENSGT00630000089849 EMBL:BX649476 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OMA:LWQTTVG
OrthoDB:EOG4CRM0M EMBL:BC049525 EMBL:BC065428 IPI:IPI00506790
RefSeq:NP_956598.1 UniGene:Dr.12320 STRING:Q7ZW92 DNASU:393274
Ensembl:ENSDART00000013224 Ensembl:ENSDART00000124627 GeneID:393274
KEGG:dre:393274 InParanoid:Q7ZW92 NextBio:20814331 Uniprot:Q7ZW92
Length = 329
Score = 202 (76.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 61/255 (23%), Positives = 118/255 (46%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
TF+ H V + ++ A+ + D KVW +G + L AH V S+ F++D
Sbjct: 54 TFLGHKGAVWGATLNTEATKAATAAADFTAKVWDAVTGDEVLTL--AHKHIVKSVNFTQD 111
Query: 319 GSQILSTSFDSTARIHGLKSGKLL-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ +L+ D RI+ L + +E GH+S + A++ N+ ++++A+ D T+++WD
Sbjct: 112 SNYLLTGGNDKVLRIYDLSKPEAEPQEIAGHTSAIKKALWCNNDQQILSAADDKTIRLWD 171
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 437
+ + ++T DASV+S+ P ++ +T + Y ++K+ +
Sbjct: 172 KNTNEAVKTLS-------FDASVSSMEYIPDGETLVITYGRTIAFY-NAHSLDLIKTVDA 223
Query: 438 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 497
+A + P ++ G+D LY + + + + K H V V P
Sbjct: 224 P----ASIHSASLHPDKDFFVAGGDDFKLYKYDYTTKEEMESYKGHFGPVHCVRFSPDGE 279
Query: 498 LLATYGEDCTMKLWK 512
L A+ ED T++LW+
Sbjct: 280 LYASGSEDGTLRLWQ 294
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 209 (78.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 47/125 (37%), Positives = 69/125 (55%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE-GVTSLVFSRD 318
F HD V + FS S +LA+G D ++K+W + SG+C + S G+TS+ F
Sbjct: 313 FDAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSIEFDSA 372
Query: 319 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
GS +L+ S D +RI + +L GHS V A F D +R+V+ S D T+K+WDL
Sbjct: 373 GSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNARIVSGSYDRTLKLWDL 432
Query: 379 KSTDC 383
+S C
Sbjct: 433 RSKVC 437
>UNIPROTKB|Q5E959 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9913 "Bos taurus" [GO:0030512 "negative regulation
of transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0030512 HSSP:P63005 GeneTree:ENSGT00630000089849
EMBL:BT021061 EMBL:BC119959 IPI:IPI00698102 RefSeq:NP_001015567.1
UniGene:Bt.17089 ProteinModelPortal:Q5E959 STRING:Q5E959
PRIDE:Q5E959 Ensembl:ENSBTAT00000018840 GeneID:510201
KEGG:bta:510201 CTD:11171 HOGENOM:HOG000174258 HOVERGEN:HBG055228
InParanoid:Q5E959 KO:K13137 OMA:LWQTTVG OrthoDB:EOG4CRM0M
NextBio:20869325 Uniprot:Q5E959
Length = 350
Score = 203 (76.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 66/255 (25%), Positives = 121/255 (47%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
TF+ H V ++D+ A+ + D KVW SG L L AH V ++ F++D
Sbjct: 54 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTL--AHKHIVKTVDFTQD 111
Query: 319 GSQILSTSFDSTARIHGLKSGKLL-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ +L+ D RI+ L + KE GH+S + A++ ++ ++++A D TV++WD
Sbjct: 112 SNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQILSAD-DKTVRLWD 170
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 437
+ +++ + SV+S+ P+ + +V+ S + + +KSF +
Sbjct: 171 HATMTEVKSLN-------FNMSVSSMEYIPEG-EILVITYGRSIAFHSAVSLDPIKSFEA 222
Query: 438 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 497
+A + P+ E++ GED LY + + SG+ K H + V P
Sbjct: 223 P----ATINSASLHPEKEFVVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGE 278
Query: 498 LLATYGEDCTMKLWK 512
L A+ ED T++LW+
Sbjct: 279 LYASGSEDGTLRLWQ 293
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 208 (78.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 83/328 (25%), Positives = 134/328 (40%)
Query: 195 DVEDM-Y-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDL 252
D+ D Y P H TK + F G L+SCS D I++ W+ + +
Sbjct: 268 DIPDKCYLPKKQLHVWTGHTKGVSAIRLFPKSGHLLLSCSMDCKIKL-WEVYNER----- 321
Query: 253 QYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTS 312
+ TF+ H + V + F+ S + D IK+W +GQC+ R
Sbjct: 322 --RCVRTFIGHSKAVRDVCFNNSGTQFLSAAYDRYIKLWDSETGQCISRFTNRKVPYCVK 379
Query: 313 LVFSRDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDC 371
D +L + ++SG++++E+ H VN F ++ R V+ S D
Sbjct: 380 FNPDEDKQNLLVAGMSDKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDK 439
Query: 372 TVKVWDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG 429
+++VW+ D FK P + S+ +V L P N + + + I I Q
Sbjct: 440 SLRVWEW---DIPADFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQN 491
Query: 430 QVVKSFSSGKREGGDFVA--AC---VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHE 484
+ + K G VA AC SP ++ D L + ++ KL H +K H+
Sbjct: 492 RF--RLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTKLYHRIKAHD 549
Query: 485 KDVIGVTHHPHR-NLLATYGEDCTMKLW 511
K I HPH + + T G D +KLW
Sbjct: 550 KVCISALWHPHETSKVITCGWDGQIKLW 577
>UNIPROTKB|E2RBU1 [details] [associations]
symbol:STRAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000122 GO:GO:0030512 GeneTree:ENSGT00630000089849 CTD:11171
KO:K13137 OMA:LWQTTVG EMBL:AAEX03015237 RefSeq:XP_543790.1
ProteinModelPortal:E2RBU1 Ensembl:ENSCAFT00000020131 GeneID:486663
KEGG:cfa:486663 Uniprot:E2RBU1
Length = 350
Score = 202 (76.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 66/255 (25%), Positives = 121/255 (47%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
TF+ H V ++D+ A+ + D KVW SG L L AH V ++ F++D
Sbjct: 54 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTL--AHKHIVKTVDFTQD 111
Query: 319 GSQILSTSFDSTARIHGLKSGKLL-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ +L+ D RI+ L + KE GH+S + A++ ++ ++++A D TV++WD
Sbjct: 112 SNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQILSAD-DKTVRLWD 170
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 437
+ +++ + SV+S+ P+ + +V+ S + + +KSF +
Sbjct: 171 HATMTEVKSLN-------FNMSVSSMEYIPEG-EILVITYGRSIAFHSAVSLDPIKSFEA 222
Query: 438 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 497
+A + P+ E++ GED LY + + SG+ K H + V P
Sbjct: 223 P----ATINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGE 278
Query: 498 LLATYGEDCTMKLWK 512
L A+ ED T++LW+
Sbjct: 279 LYASGSEDGTLRLWQ 293
>UNIPROTKB|Q9Y3F4 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9606 "Homo sapiens" [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030054 "cell junction" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0005634 Reactome:REACT_111102
Pathway_Interaction_DB:tgfbrpathway GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0007179 EMBL:CH471094 GO:GO:0030512 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M
EMBL:AJ010025 EMBL:AB024327 EMBL:AF161496 EMBL:AY049776
EMBL:AL136691 EMBL:BT020044 EMBL:BT020045 EMBL:AK312295
EMBL:BC000162 EMBL:BC062306 IPI:IPI00941907 RefSeq:NP_009109.3
UniGene:Hs.504895 ProteinModelPortal:Q9Y3F4 SMR:Q9Y3F4
IntAct:Q9Y3F4 MINT:MINT-1346033 STRING:Q9Y3F4 PhosphoSite:Q9Y3F4
DMDM:12643951 OGP:Q9Y3F4 PaxDb:Q9Y3F4 PeptideAtlas:Q9Y3F4
PRIDE:Q9Y3F4 DNASU:11171 Ensembl:ENST00000419869 GeneID:11171
KEGG:hsa:11171 UCSC:uc001rdc.4 GeneCards:GC12P016035
HGNC:HGNC:30796 HPA:HPA027320 MIM:605986 neXtProt:NX_Q9Y3F4
PharmGKB:PA134867032 InParanoid:Q9Y3F4 PhylomeDB:Q9Y3F4
ChiTaRS:STRAP GenomeRNAi:11171 NextBio:42509 ArrayExpress:Q9Y3F4
Bgee:Q9Y3F4 CleanEx:HS_STRAP Genevestigator:Q9Y3F4
GermOnline:ENSG00000023734 Uniprot:Q9Y3F4
Length = 350
Score = 202 (76.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 66/255 (25%), Positives = 121/255 (47%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
TF+ H V ++D+ A+ + D KVW SG L L AH V ++ F++D
Sbjct: 54 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTL--AHKHIVKTVDFTQD 111
Query: 319 GSQILSTSFDSTARIHGLKSGKLL-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ +L+ D RI+ L + KE GH+S + A++ ++ ++++A D TV++WD
Sbjct: 112 SNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQILSAD-DKTVRLWD 170
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 437
+ +++ + SV+S+ P+ + +V+ S + + +KSF +
Sbjct: 171 HATMTEVKSLN-------FNMSVSSMEYIPEG-EILVITYGRSIAFHSAVSLDPIKSFEA 222
Query: 438 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 497
+A + P+ E++ GED LY + + SG+ K H + V P
Sbjct: 223 P----ATINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGE 278
Query: 498 LLATYGEDCTMKLWK 512
L A+ ED T++LW+
Sbjct: 279 LYASGSEDGTLRLWQ 293
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 203 (76.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 67/225 (29%), Positives = 113/225 (50%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G + D+++ + +TI + + +FSP+GQ S +G I +++ +GK
Sbjct: 2 GIPILSSDIQESDLYKIRYTINEPSITFT-AIKFSPNGQNFACSSSNGKI-YIYNTTTGK 59
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSR-DSEMLASGSQDGKIKVWRIRSGQCLRRLERAH 306
L T H + + I +S +S +LAS S D I++W I +C++ L R H
Sbjct: 60 LIT--------TLSGHTKGISDIVYSPINSNILASCSDDLTIRLWNITQQRCIKLL-RKH 110
Query: 307 SEGVTSLVFSRDGSQILSTSFDSTARIHGLKS--GKLLKEFRGHSSYVNDAIFTNDGSRV 364
+ +T+L F++ G+ ++S S D T I + S GK+L HS V+ T D S +
Sbjct: 111 TYHITTLKFTQKGNILISGSSDETITIWDITSNGGKILTTLAAHSDPVSSIALTPDDSII 170
Query: 365 VTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA--SVNSVHLFP 407
V+AS D ++++DL+++ CL+T G A S N V FP
Sbjct: 171 VSASYDGLMRLFDLQTSQCLKTLTNSTFGGHGTATASTNDVINFP 215
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 45/125 (36%), Positives = 69/125 (55%)
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE-GVTSLVFSRD 318
F HD V ++FS S +LA+G D ++K+W + +C + + S G+TS+ F
Sbjct: 318 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSA 377
Query: 319 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
GS +L+ S D +RI + +L GHS V A F D +R+V+ S D T+K+WDL
Sbjct: 378 GSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 437
Query: 379 KSTDC 383
+S C
Sbjct: 438 RSKVC 442
Score = 176 (67.0 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 67/280 (23%), Positives = 123/280 (43%)
Query: 220 RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 279
+FSP + L + D +++ W+ L + + + IEF L
Sbjct: 329 QFSPGSRLLATGGMDRRVKL-WEVLGDRCEPKGSLSGSNA------GITSIEFDSAGSYL 381
Query: 280 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 339
+ S D ++W + + LR HS V S F D ++I+S S D T ++ L+S
Sbjct: 382 LAASNDFASRIWTVDDNR-LRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 440
Query: 340 --KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
+ F G S ND + T V++ D ++ WD+++ ++ + L G
Sbjct: 441 VCNIKTVFAGSSC--NDIVCTEQC--VMSGHFDKKIRFWDIRTESIVKELE----LLG-- 490
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSS-GKREGGDFVAACVSPKGE 455
+ ++ L + + ++ C++ + I+ L+ G V ++FS+ G + G D+ SP G
Sbjct: 491 -RITALDLNSERTE-LLTCSRDDLLKIIDLRVGAVKQTFSAQGFKCGSDWTRVVFSPDGN 548
Query: 456 WIYCVGEDRNLYCFSHQSGKLEH-LMKVHEKDVIGVTHHP 494
++ D LY ++ +GKLE L K H + V P
Sbjct: 549 YVAAGSADGALYVWNVLTGKLERTLAKHHSSPINAVAWSP 588
Score = 128 (50.1 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 56/261 (21%), Positives = 107/261 (40%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G+ + F G +L++ S D F +W +L+ T H VL
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASND-FASRIWTVDDNRLR--------HTLTGHSGKVLSA 414
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F D+ + SGS D +K+W +RS C + A S +V + ++S FD
Sbjct: 415 KFLLDNARIVSGSHDRTLKLWDLRSKVCNIKTVFAGSS-CNDIVCTEQC--VMSGHFDKK 471
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
R +++ ++KE + ++ + ++T S D +K+ DL+ QTF
Sbjct: 472 IRFWDIRTESIVKELE-LLGRITALDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQ 530
Query: 391 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-LQGQVVKSFSSGKREGGDFVAAC 449
G D + V +F + +++ + ++Y+ L G++ ++ + K A
Sbjct: 531 GFKCGSDWT--RV-VFSPDGNYVAAGSADGALYVWNVLTGKLERTLA--KHHSSPINAVA 585
Query: 450 VSPKGEWIYCVGEDRNLYCFS 470
SP G + V + +S
Sbjct: 586 WSPAGAHVVSVDKGNKAVLWS 606
>UNIPROTKB|Q5ZL33 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9031 "Gallus gallus" [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 GO:GO:0005886 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030054
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0005102 GO:GO:0005681 GO:GO:0000122 GO:GO:0030512 HSSP:P63005
GeneTree:ENSGT00630000089849 CTD:11171 HOGENOM:HOG000174258
HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M EMBL:AJ719901
IPI:IPI00577361 RefSeq:NP_001006247.2 UniGene:Gga.44357
ProteinModelPortal:Q5ZL33 STRING:Q5ZL33 PRIDE:Q5ZL33
Ensembl:ENSGALT00000021374 GeneID:418175 KEGG:gga:418175
InParanoid:Q5ZL33 NextBio:20821378 Uniprot:Q5ZL33
Length = 350
Score = 201 (75.8 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 70/255 (27%), Positives = 121/255 (47%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
TF+ H V ++D+ A+ + D KVW SG L L AH V S+ F++D
Sbjct: 54 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELITL--AHKHIVKSVDFTQD 111
Query: 319 GSQILSTSFDSTARIHGLKSGKLLKEF-RGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ +L+ D RI+ L + + GH+S + A++++D ++++A D TV++WD
Sbjct: 112 SNYLLTGGQDKLLRIYDLSKPEAEPDVVSGHTSGIKKALWSSDDKQILSAD-DKTVRLWD 170
Query: 378 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 437
+ST + K L SV+S+ P+ ++ KT + + Q+ KSF +
Sbjct: 171 -RST--MTEVKA---LNVA-MSVSSMEYVPEGQILVITYGKTIAFHSAETLEQI-KSFEA 222
Query: 438 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 497
+A + P+ E + GED LY + + +G+ K H + V P
Sbjct: 223 P----ATINSASLHPEKECLVAGGEDFKLYKYDYNTGEELESYKGHFGPIHCVRFSPDGE 278
Query: 498 LLATYGEDCTMKLWK 512
L A+ ED T++LW+
Sbjct: 279 LYASGSEDGTLRLWQ 293
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 70/298 (23%), Positives = 124/298 (41%)
Query: 188 GTAAMKQ-DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSG 246
G ++Q D D T L H K A + D + + D F VWD +SG
Sbjct: 39 GKPMLRQGDTGDWIGTFLGH------KGAVWGATLNKDATKAATAAAD-FTAKVWDAVSG 91
Query: 247 KLKKDLQYQADETFMM-HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERA 305
DE + H V ++F++DS L +G QD ++++ + + +
Sbjct: 92 ----------DELITLAHKHIVKSVDFTQDSNYLLTGGQDKLLRIYDLSKPEAEPDVVSG 141
Query: 306 HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV 365
H+ G+ ++S D QILS D T R+ + +K S V+ + +G +++
Sbjct: 142 HTSGIKKALWSSDDKQILSAD-DKTVRLWDRSTMTEVKALNVAMS-VSSMEYVPEG-QIL 198
Query: 366 TASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM 425
+ T+ ++ + +++F+ P A++NS L P+ + +V + +Y
Sbjct: 199 VITYGKTIAFHSAETLEQIKSFEAP-------ATINSASLHPEK-ECLVAGGEDFKLYKY 250
Query: 426 TLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMK 481
G+ ++S+ K G SP GE +Y G ED L + GK L K
Sbjct: 251 DYNTGEELESY---KGHFGPIHCVRFSPDGE-LYASGSEDGTLRLWQTTVGKTYGLWK 304
>UNIPROTKB|P73595 [details] [associations]
symbol:slr1410 "Uncharacterized WD repeat-containing
protein slr1410" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR ProtClustDB:CLSK501008 PIR:S77305
RefSeq:NP_440959.1 RefSeq:YP_005651018.1 ProteinModelPortal:P73595
IntAct:P73595 STRING:P73595 GeneID:12255184 GeneID:954269
KEGG:syn:slr1410 KEGG:syy:SYNGTS_1065 PATRIC:23839192 OMA:NTIRIRD
Uniprot:P73595
Length = 334
Score = 200 (75.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 69/265 (26%), Positives = 119/265 (44%)
Query: 252 LQYQADETFMMHD---ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 308
+Q + +++ H E ++ I +S+D L S + DG K+W G+ +R
Sbjct: 43 IQLEVIKSYQGHTLKGEAIIQIHYSQDGNYLLSTATDGLAKLWTA-DGELVREFAGKPVA 101
Query: 309 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 368
+ + FSRDG I++ ++ ARI ++ G +L E GH+S V D +F +D VVT+S
Sbjct: 102 MIFNGAFSRDGKAIITAGYNGVARIWDVQ-GNVLGEILGHTSAVTDVVFLSDDMGVVTSS 160
Query: 369 SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ 428
D T++ W + L T P R D F + I V I ++
Sbjct: 161 DDGTIEGWS-NIKEPLFTVTRPGVSRNMD--------FNAQTNLIAVTQDIGEITLLNPA 211
Query: 429 GQVVKSFSS--GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKD 486
G+VV+ + G+ DF S G+ + G D F+ ++ + + +
Sbjct: 212 GKVVRIIETDQGRLNDVDF-----SQDGKLLVTAGFDGTARVFNLDGQEILKIDVLDDGW 266
Query: 487 VIGVTHHPHRNLLATYGEDCTMKLW 511
V GV + NL+AT +D +++W
Sbjct: 267 VTGVAINQD-NLIATVSDDGILRVW 290
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 199 (75.1 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 55/171 (32%), Positives = 84/171 (49%)
Query: 214 SH-AECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEF 272
SH E S DGQF +S S+DG + + WD +G + F+ H + VL + F
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWDGELRL-WDLAAGV--------STRRFVGHTKDVLSVAF 113
Query: 273 SRDSEMLASGSQDGKIKVWRIRSGQCLRRLERA---HSEGVTSLVFSRDGSQ--ILSTSF 327
S D+ + S S+D IK+W G+C + H + V+ + FS + Q I+S S+
Sbjct: 114 SLDNRQIVSASRDRTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW 172
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
D T ++ L + KL GH+ YV+ + DGS + D V +WDL
Sbjct: 173 DKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL 223
Score = 177 (67.4 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 71/264 (26%), Positives = 111/264 (42%)
Query: 259 TFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRS-----GQCLRRLERAHSEGVTS 312
T H + V I D+ +++ S S+D I +W++ G RRL HS V
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT-GHSHFVED 68
Query: 313 LVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCT 372
+V S DG LS S+D R+ L +G + F GH+ V F+ D ++V+AS D T
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRT 128
Query: 373 VKVWDLKSTDCLQTFKPPPPLRGGDAS---VNSVHLFPKN-PDHIVVCNKTSSIYIMTLQ 428
+K+W+ +C T GG+ V+ V P IV + ++ + L
Sbjct: 129 IKLWNTLG-ECKYTIS-----EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 182
Query: 429 GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 488
++S +G G VSP G G+D + + GK L + VI
Sbjct: 183 NCKLRSTLAGHT--GYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK--KLYSLEANSVI 238
Query: 489 -GVTHHPHRNLLATYGEDCTMKLW 511
+ P+R L E +K+W
Sbjct: 239 HALCFSPNRYWLCAATEH-GIKIW 261
Score = 142 (55.0 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 49/170 (28%), Positives = 81/170 (47%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDS--EM 278
FS D + +VS S D I++ W+ L G+ K Y E H + V C+ FS ++
Sbjct: 113 FSLDNRQIVSASRDRTIKL-WNTL-GECK----YTISEGGEGHRDWVSCVRFSPNTLQPT 166
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 338
+ S S D +KVW + + + LR H+ V+++ S DGS S D + L
Sbjct: 167 IVSASWDKTVKVWNLSNCK-LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE 225
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
GK L +S V A+ + + A+++ +K+WDL+S ++ K
Sbjct: 226 GKKLYSLEANS--VIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLK 273
Score = 135 (52.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 58/226 (25%), Positives = 98/226 (43%)
Query: 296 GQCLRRLERAHSEGVTSLVFSRDGSQIL-STSFDSTARIHGLKS-----GKLLKEFRGHS 349
G L+ RAH++ VT++ D + I+ S S D + + L G + GHS
Sbjct: 4 GLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHS 63
Query: 350 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN 409
+V D + ++DG ++ S D +++WDL + + F G V SV F +
Sbjct: 64 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV------GHTKDVLSV-AFSLD 116
Query: 410 PDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV--SPKG--EWIYCVGEDRN 465
IV ++ +I + G+ + S G D+V+ CV SP I D+
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVS-CVRFSPNTLQPTIVSASWDKT 175
Query: 466 LYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ ++ + KL + H V V P +L A+ G+D + LW
Sbjct: 176 VKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW 221
>UNIPROTKB|P74598 [details] [associations]
symbol:sll1491 "Uncharacterized WD repeat-containing
protein sll1491" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S76794 RefSeq:NP_442894.1
RefSeq:YP_005652955.1 ProteinModelPortal:P74598 IntAct:P74598
GeneID:12255406 GeneID:952007 KEGG:syn:sll1491 KEGG:syy:SYNGTS_3002
PATRIC:23843592 OMA:KMPEQTI ProtClustDB:CLSK2301952 Uniprot:P74598
Length = 348
Score = 200 (75.5 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 63/245 (25%), Positives = 106/245 (43%)
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF-D 328
+ S D + LA + D + V R+R G + L H++ V+ + FS DG I+S S D
Sbjct: 109 LAISADGQWLAIAA-DNNVDVRRVRDGMRVETLV-GHTDKVSGVAFSPDGETIVSVSGGD 166
Query: 329 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS--SDCTVKVWDLKSTDCLQT 386
T RI SG L++ + +FT DGS+ +T + D T+K WD + + L T
Sbjct: 167 RTIRIWERASGNLIQTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGT 226
Query: 387 FKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFV 446
P P +N + + PD + + ++ K S + +
Sbjct: 227 -SPQQP-----GFINGLAV---TPDGRKLVGAVRN-FVKAWNLADAKELFSVRGPSLEIN 276
Query: 447 AACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDC 506
VSP W+ ++ + F +GK ++ H+ V+ + P N L + ED
Sbjct: 277 TIAVSPNNRWVATANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDK 336
Query: 507 TMKLW 511
T+K+W
Sbjct: 337 TVKIW 341
Score = 178 (67.7 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 60/213 (28%), Positives = 99/213 (46%)
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQ-DGKIKVWRIRSGQCLRRLERAHSEG-VTSLVF 315
ET + H + V + FS D E + S S D I++W SG ++ L A + G TS+VF
Sbjct: 138 ETLVGHTDKVSGVAFSPDGETIVSVSGGDRTIRIWERASGNLIQTL--ADNLGPTTSVVF 195
Query: 316 SRDGSQILSTSF--DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTV 373
+ DGSQ ++ + D T + + +LL ++N T DG ++V A + V
Sbjct: 196 TPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTPDGRKLVGAVRNF-V 254
Query: 374 KVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK 433
K W+L D + F +RG +N++ + P N + NK +I I L K
Sbjct: 255 KAWNL--ADAKELFS----VRGPSLEINTIAVSPNNR-WVATANKEGTIMIFDLANG--K 305
Query: 434 SFSSGKREGGDFVAACVSPKGEWIYCVGEDRNL 466
++ + G ++ SP G +Y ED+ +
Sbjct: 306 QVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTV 338
Score = 154 (59.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
+PDG++L + D I ++ D + +++ Y + +++ L I S D + LA
Sbjct: 70 TPDGKYLAVATADNQITLI-DLAN----QEVVYS--QRSPVNNFADLAI--SADGQWLAI 120
Query: 282 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF-DSTARIHGLKSGK 340
+ D + V R+R G + L H++ V+ + FS DG I+S S D T RI SG
Sbjct: 121 AA-DNNVDVRRVRDGMRVETLV-GHTDKVSGVAFSPDGETIVSVSGGDRTIRIWERASGN 178
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTAS--SDCTVKVWDLKSTDCLQTFKPPPP 392
L++ + +FT DGS+ +T + D T+K WD + + L T P P
Sbjct: 179 LIQTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGT-SPQQP 231
Score = 117 (46.2 bits), Expect = 0.00057, P = 0.00057
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 288 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG 347
+K W + + L + R S + ++ S + + + + + T I L +GK + RG
Sbjct: 254 VKAWNLADAKELFSV-RGPSLEINTIAVSPNNRWVATANKEGTIMIFDLANGKQVTTLRG 312
Query: 348 HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
H +V F+ DG+ + + + D TVK+WDL +
Sbjct: 313 HQGWVLSLAFSPDGNTLYSGAEDKTVKIWDLSA 345
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 205 (77.2 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 86/324 (26%), Positives = 128/324 (39%)
Query: 197 EDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSF--DGFIEVVWDYLSGKLKKDLQY 254
EDM T +K +C+ F D L CSF DG I LSG K
Sbjct: 229 EDMDAET-KWALKHAKHMALDCSNFGDDRP-LTGCSFSRDGKILATCS-LSGVTKLWEMP 285
Query: 255 QADETFMM---HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVT 311
Q T + H E + FS + LA+ S D K+W+ G L+ E H + +
Sbjct: 286 QVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKT-DGTLLQTFE-GHLDRLA 343
Query: 312 SLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDC 371
+ F G + +TS+D T R+ + +G L GHS V F DG+ + D
Sbjct: 344 RVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDS 403
Query: 372 TVKVWDLKSTDCLQTFKPP-PPLRGGDASVNSVHLFPKNPDH---IVVCNKTSSIYIMTL 427
+VWDL++ + F+ P+ + S N HL D+ I S+YI+
Sbjct: 404 LARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPA 463
Query: 428 QGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDV 487
+V +EG + A S Y D + +S + L + HE V
Sbjct: 464 HANLVSQVKYEPQEG--YFLATAS------Y----DMKVNIWSGRDFSLVKSLAGHESKV 511
Query: 488 IGVTHHPHRNLLATYGEDCTMKLW 511
+ + +AT D T+KLW
Sbjct: 512 ASLDITADSSCIATVSHDRTIKLW 535
Score = 175 (66.7 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 47/163 (28%), Positives = 74/163 (45%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
F DG SC D V WD +G+ L +Q H + V + FS + LA
Sbjct: 389 FQQDGALAASCGLDSLARV-WDLRTGR--SILVFQG------HIKPVFSVNFSPNGYHLA 439
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS-RDGSQILSTSFDSTARIHGLKSG 339
SG +D + ++W +R + L + AH+ V+ + + ++G + + S+D I +
Sbjct: 440 SGGEDNQCRIWDLRMRKSLYIIP-AHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDF 498
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
L+K GH S V T D S + T S D T+K+W D
Sbjct: 499 SLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGND 541
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 198 (74.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 57/173 (32%), Positives = 82/173 (47%)
Query: 220 RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDET-----VLCIEFSR 274
+F P G L +WD S +L L + D+T VL + +S
Sbjct: 109 QFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSP 168
Query: 275 DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL-STSFDSTARI 333
+ + LA GS DG I V+ + + L +LE H+ V SLVFS ++L S S D +
Sbjct: 169 NGKRLACGSMDGTICVFDVDRSKLLHQLE-GHNMPVRSLVFSPVDPRVLFSGSDDGHVNM 227
Query: 334 HGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 386
H + LL GH+S+V + DG + T SSD TV++WDLK +QT
Sbjct: 228 HDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQT 280
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 57/243 (23%), Positives = 95/243 (39%)
Query: 278 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 337
+L +GS D +K+WR L R HS GV +L G S+S DS R+ +
Sbjct: 32 LLLTGSLDETVKLWRPDELD-LVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVD 90
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS-SDCTVKVWDLKSTDCLQTFKPPPP--LR 394
+ + S V F G+ + A S +VK+WD S + T P P +
Sbjct: 91 TNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPK 150
Query: 395 GGDAS-----VNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKREGGDFVAA 448
D + V SV P N + + +I + + + +++ V +
Sbjct: 151 PSDKTSSKKFVLSVAWSP-NGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFS 209
Query: 449 CVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTM 508
V P+ ++ +D ++ + L M H V+ V P +AT D T+
Sbjct: 210 PVDPRV--LFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTV 267
Query: 509 KLW 511
+LW
Sbjct: 268 RLW 270
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 50/176 (28%), Positives = 74/176 (42%)
Query: 209 KFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVL 268
K +K +SP+G+ L S DG I V+D KL L+ H+ V
Sbjct: 154 KTSSKKFVLSVAWSPNGKRLACGSMDGTI-CVFDVDRSKLLHQLEG--------HNMPVR 204
Query: 269 CIEFSR-DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
+ FS D +L SGS DG + + G+ L H+ V S+ S DG I + S
Sbjct: 205 SLVFSPVDPRVLFSGSDDGHVNM-HDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSS 263
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS------RVVTASSDCTVKVWD 377
D T R+ LK ++ H+ V F G R+ + S D +V ++D
Sbjct: 264 DRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGRLASVSDDKSVSLYD 319
>RGD|1310631 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000421 "autophagic vacuole
membrane" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310631 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
IPI:IPI00766621 ProteinModelPortal:D3ZLV2
Ensembl:ENSRNOT00000056840 UCSC:RGD:1310631 ArrayExpress:D3ZLV2
Uniprot:D3ZLV2
Length = 605
Score = 197 (74.4 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 45/129 (34%), Positives = 69/129 (53%)
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE-GVTSLV 314
A F HD V ++FS S +LA+G D ++K+W +C + + S G+TS+
Sbjct: 295 ASYVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIE 354
Query: 315 FSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
F G+ +L+ S D +RI + +L GHS V A F D +R+V+ S D T+K
Sbjct: 355 FDSAGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLK 414
Query: 375 VWDLKSTDC 383
+WDL+S C
Sbjct: 415 LWDLRSKVC 423
Score = 120 (47.3 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 62/269 (23%), Positives = 113/269 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G+ + F G +L++ S D F +W D Y+ T H VL
Sbjct: 345 GSNAGITSIEFDSAGAYLLAASND-FASRIWTV-------D-DYRLRHTLTGHSGKVLSA 395
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQC--LRRL----ERAHSEGVTSLVFSRDGSQILS 324
+F D+ + SGS D +K+W +RS C ++ L A G+ ++ + I+
Sbjct: 396 KFLLDNARIVSGSHDRTLKLWDLRSKVCEEMQSLCVLMTFAFLLGIKTVFAGSSCNDIVC 455
Query: 325 TS-------FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN-DGSRVVTASSDCTVKVW 376
T FD R ++S +++E A+ N + + +++ S D +K+
Sbjct: 456 TEQCVMSGHFDKKIRFWDIRSESVVREMELLGKIT--ALDLNPERTELLSCSRDDLLKII 513
Query: 377 DLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-LQGQVVKSF 435
DL++ Q+F P G D + V +F + ++ + S+Y+ + L G+V K
Sbjct: 514 DLRTNAIKQSFSAPGFKCGSDWT--RV-VFSPDGSYVAAGSADGSLYVWSVLTGKVEKVL 570
Query: 436 SSGKREGGDFVAACVSPKGEWIYCVGEDR 464
S K+ A +P G ++ V D+
Sbjct: 571 S--KQHSSSINAVAWAPSG--LHVVSVDK 595
Score = 112 (44.5 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 29/110 (26%), Positives = 56/110 (50%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
+P+ L+SCS D ++++ D + +K+ + A D T + FS D +A+
Sbjct: 495 NPERTELLSCSRDDLLKII-DLRTNAIKQS--FSAPGFKCGSDWTR--VVFSPDGSYVAA 549
Query: 282 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 331
GS DG + VW + +G+ + L + HS + ++ ++ G ++S S A
Sbjct: 550 GSADGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAPSGLHVVSVDKGSRA 599
Score = 53 (23.7 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 55 RWDAILPQVAQLKLPRNKLE-DLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPER 113
RW +A+ R++L+ +E+I+L+ +L E ++L TQ + K + P R
Sbjct: 12 RWKR---HIAEELRRRDRLQRQAFEEIILQYTKLLEKSDLHSVL--TQKLQAEKHDVPNR 66
Query: 114 Y 114
+
Sbjct: 67 H 67
Score = 53 (23.7 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 17/70 (24%), Positives = 36/70 (51%)
Query: 12 KIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRW-DAILPQVAQLKLP- 69
+I+LQ+ K L + Q + V + ++ + G W D+ L ++AQLK+
Sbjct: 34 EIILQYTKLLEKSDLHSVLTQKLQAEKHDVPNRHE-ISPGHDGAWNDSQLQEMAQLKMKH 92
Query: 70 RNKLEDLYEQ 79
+ +L +L+++
Sbjct: 93 QEELTELHKK 102
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 206 (77.6 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 56/184 (30%), Positives = 94/184 (51%)
Query: 205 SHTIKFGTKSHAECAR-FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMH 263
+HTIK T H++ + ++L++ S+D I++ W SG+ K T H
Sbjct: 373 THTIKTFT-GHSDGVTCLQFNRKYLMTGSYDTTIKI-WKIDSGECVK--------TLTGH 422
Query: 264 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
+ V + F D++ L SG D IKVW +GQC+ R H + V S+ F+ I+
Sbjct: 423 TKGVRALVF--DNQKLISGGLDSTIKVWNYHTGQCIATY-RGHEDAVVSVDFTN--KSIV 477
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
S S D T R+ + S + RGH+ +VN + + + +AS D T+++WD+ S +C
Sbjct: 478 SGSADHTVRVWHVDS-RTCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNEC 536
Query: 384 LQTF 387
++ F
Sbjct: 537 IKVF 540
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 44/146 (30%), Positives = 71/146 (48%)
Query: 289 KVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH 348
K WR G + HS+GVT L F+R +++ S+D+T +I + SG+ +K GH
Sbjct: 367 KNWR--KGTHTIKTFTGHSDGVTCLQFNR--KYLMTGSYDTTIKIWKIDSGECVKTLTGH 422
Query: 349 SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK 408
+ V +F D ++++ D T+KVW+ + C+ T+ RG + +V SV K
Sbjct: 423 TKGVRALVF--DNQKLISGGLDSTIKVWNYHTGQCIATY------RGHEDAVVSVDFTNK 474
Query: 409 N-----PDHIVVCNKTSSIYIMTLQG 429
+ DH V S TL+G
Sbjct: 475 SIVSGSADHTVRVWHVDSRTCYTLRG 500
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 37/124 (29%), Positives = 61/124 (49%)
Query: 224 DGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 283
D Q L+S D I+V W+Y +G Q T+ H++ V+ ++F+ S + SGS
Sbjct: 432 DNQKLISGGLDSTIKV-WNYHTG--------QCIATYRGHEDAVVSVDFTNKS--IVSGS 480
Query: 284 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLK 343
D ++VW + S C R H++ V + + I S S D+T R+ + S + +K
Sbjct: 481 ADHTVRVWHVDSRTCYTL--RGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIK 538
Query: 344 EFRG 347
F G
Sbjct: 539 VFGG 542
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 165 (63.1 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 42/161 (26%), Positives = 75/161 (46%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
+SP G FL S SFD +WD SG +++ + T H+ V +++S +LA
Sbjct: 58 WSPCGTFLASASFDA-TTCIWDQKSG------EFECNATLEGHENEVKSVDWSVSGSLLA 110
Query: 281 SGSQDGKIKVWRIRSG---QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 337
+ +D + +W ++ +C + +H++ V +V+ + S S+D T +++
Sbjct: 111 TCGRDKSVWIWEVQEDDEYECASVIH-SHTQDVKKVVWHPTKEILASCSYDDTIKLYKED 169
Query: 338 SG--KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
GH S V F G R+V+ S D TV++W
Sbjct: 170 EDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIW 210
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 63/271 (23%), Positives = 111/271 (40%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQ--CLRRLERAHSEGVTSLVFSRDGS 320
H++ V + +S + +LAS D I++W + C LE H + SL +S G+
Sbjct: 4 HEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSPCGT 63
Query: 321 QILSTSFDSTARIHGLKSGKLL--KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
+ S SFD+T I KSG+ GH + V ++ GS + T D +V +W++
Sbjct: 64 FLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEV 123
Query: 379 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM-----------TL 427
+ D ++ + V V P + + C+ +I + TL
Sbjct: 124 QEDD---EYECASVIHSHTQDVKKVVWHPTK-EILASCSYDDTIKLYKEDEDDWSCCDTL 179
Query: 428 QGQVVKSFSSGKREGGDFVAACVSPKGE--W-IYCVGEDRNLYCFS-HQSGKLEHLMK-V 482
+G +S GD + +C K W Y G + H K ++
Sbjct: 180 EGHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGY 239
Query: 483 HEKDVIGVTHHPHRNLLATY-GEDCTMKLWK 512
H++ + V L+AT G+DC ++++K
Sbjct: 240 HDRTIYDVHWSKVSGLIATASGDDC-IRIFK 269
Score = 76 (31.8 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 481 KVHEKDVIGVTHHPH-RNLLATYGEDCTMKLWK 512
K H DV + HP N+LAT +D T+KLW+
Sbjct: 289 KAHSMDVNSICWHPKDENILATCSDDGTVKLWR 321
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 198 (74.8 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 73/304 (24%), Positives = 129/304 (42%)
Query: 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLC 269
FG + ARF P G + S D I ++W+ G +K Y +
Sbjct: 47 FGHTAEVLVARFDPSGSYFASGGMDRQI-LLWNVF-GDVKN---YGVLNGCK---GAITD 98
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL-STSFD 328
+++SRDS ++ S D + W SGQ +R+ + H+ V +L + GS++L S S D
Sbjct: 99 LQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRK-HKGHAGVVNALDVLKVGSELLTSVSDD 157
Query: 329 STARIHGLKSGKLLKEFRGHSSYVNDAI-FTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
T ++ +S +K Y A+ G++V D +K+WDL++ C
Sbjct: 158 CTMKVWDSRSKDCIKTIE--EKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVL 215
Query: 388 KPPPPLRGGDA-SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFV 446
K + A S + L + D+ V Q Q+ + G+ + +
Sbjct: 216 KGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEH--NLL 273
Query: 447 AACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDC 506
S ++ D+N+Y +S +G L +++ HE V V HPH++++ + D
Sbjct: 274 GVAWSRNSRFVGAGSSDKNVYVWS-ATGDLRYVLPGHEGSVNHVDFHPHQDIILSCSSDR 332
Query: 507 TMKL 510
T+ L
Sbjct: 333 TIFL 336
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 206 (77.6 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 71/247 (28%), Positives = 117/247 (47%)
Query: 204 LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDY---LSGKLKKDL-----QYQ 255
L H G S C+R F+V+ S D I+V W+ L+ K K L
Sbjct: 428 LGHAHGVGAVS---CSRLKES--FVVTSSQDCTIKV-WNIPESLTSKAKAALISGPETLH 481
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
A T HD+ + + S + +++A+GSQD K+W L + H G+ + F
Sbjct: 482 AQMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLG-VFTGHKRGIWCVQF 540
Query: 316 SRDGSQILSTSF-DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
S QIL+TS D T ++ GL+ LK F GH + V IF + G+++++ SD +K
Sbjct: 541 S-PVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLK 599
Query: 375 VWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKS 434
+W +K+ +C++T L G + + +H K D +V + SSI + ++ +
Sbjct: 600 LWTIKTNECVKT------LDGHEDKIWGLHT-NKQDDMVVTASSDSSITLWKDVTEIEQE 652
Query: 435 FSSGKRE 441
+ KRE
Sbjct: 653 EAQAKRE 659
Score = 180 (68.4 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 65/237 (27%), Positives = 107/237 (45%)
Query: 193 KQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDL 252
K +V D+ L H+++ + SPD + LV+ S + W++ + +
Sbjct: 47 KLNVIDVETGALLHSLEQDDQEDITSFVLSPDDEVLVTGS-RALLLKQWNWRENRCVRT- 104
Query: 253 QYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTS 312
++A +H V + F S +LA+G D IK+W + C L+ S GV
Sbjct: 105 -WKA-----VHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKG--SSGVVH 156
Query: 313 LV-FSRDGS--QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS 369
LV F D S Q+ S+S D RI L S K + GH S V FT DG+ ++++
Sbjct: 157 LVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGR 216
Query: 370 DCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT 426
D VW+LK+ + ++T P+ SV + L P+ D + K ++ +T
Sbjct: 217 DKICMVWNLKTRESIRTI----PIY---ESVEAAVLLPEQGDFSQLGVKKQGLHFLT 266
Score = 152 (58.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 46/165 (27%), Positives = 78/165 (47%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DG+F+ C + V+ D +G L L+ Q D+ E + S D E+L +
Sbjct: 34 SRDGKFMF-CPCGTKLNVI-DVETGALLHSLE-QDDQ------EDITSFVLSPDDEVLVT 84
Query: 282 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 341
GS+ +K W R +C+R + H V ++VF + + + DST +I +
Sbjct: 85 GSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYC 144
Query: 342 LKEFRGHSSYVNDAIFTNDGSRV--VTASSDCTVKVWDLKSTDCL 384
+G S V+ F D SR+ ++S D +++WDL S+ C+
Sbjct: 145 THNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCV 189
Score = 136 (52.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 51/181 (28%), Positives = 91/181 (50%)
Query: 270 IEFSRD-SEM-LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
+EF D S + L S S D KI++W + S +C+ L+ H VTSL F+ DG+ ++S+
Sbjct: 158 VEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLD-GHFSAVTSLAFTADGNTLISSGR 216
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAI-------FTN-----DGSRVVTASSDCTVKV 375
D + LK+ + ++ + S V A+ F+ G +TA S +KV
Sbjct: 217 DKICMVWNLKTRESIRTIPIYES-VEAAVLLPEQGDFSQLGVKKQGLHFLTAGSKGVLKV 275
Query: 376 WDLKSTDCLQTFKPPP--PLRGGD-ASVNSV-H--LFPKNPDHIVVCNKTSSIYI--MTL 427
W++ + C+ + +P P P+ + AS +S+ H L P+ + + V + + ++ TL
Sbjct: 276 WEVATAACVYS-QPVPFEPVESEEEASEHSLTHCMLVPERNEIVTVSVEHNIVFYDAQTL 334
Query: 428 Q 428
Q
Sbjct: 335 Q 335
Score = 121 (47.7 bits), Expect = 0.00072, P = 0.00072
Identities = 65/274 (23%), Positives = 113/274 (41%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRI-RSGQ--CLRR-LERAHSEGVTSLVFSRD 318
H ET+L ++ R M S ++D I+VWR+ + G+ C+ + L AH G S ++
Sbjct: 385 HTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLKE 444
Query: 319 GSQILSTSFDSTARIHGLK------------SGK--LLKEF--RGHSSYVND-AIFTNDG 361
S ++++S D T ++ + SG L + RGH +N A+ ND
Sbjct: 445 -SFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINSVAVSPND- 502
Query: 362 SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS 421
+ T S D K+W L F G + V P D I+ +
Sbjct: 503 KLIATGSQDRLAKLWSCPDCSLLGVFT------GHKRGIWCVQFSPV--DQILATSSADG 554
Query: 422 IYIMTLQGQVVKSFSSGKR-EGGD--FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 478
+ L G ++ FS K EG D + +G + G D L ++ ++ +
Sbjct: 555 T--LKLWG--LQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNECVK 610
Query: 479 LMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ HE + G+ + +++ T D ++ LWK
Sbjct: 611 TLDGHEDKIWGLHTNKQDDMVVTASSDSSITLWK 644
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 198 (74.8 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 48/162 (29%), Positives = 77/162 (47%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSR-DSE 277
A F+PDG + +CS D + WD +G Q F H V ++ SR +
Sbjct: 104 AHFTPDGSHIFTCSTDKTL-AFWDIATG--------QRQRRFKGHGNFVNSVQGSRRGQQ 154
Query: 278 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 337
+L SGS D IK+W R LE VT++ F G Q++S D+ +I ++
Sbjct: 155 LLCSGSDDRTIKIWDARKKHAAHTLESPFQ--VTAVCFGDTGEQVISGGIDNEVKIWDIR 212
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
+L RGHS + + +G ++T + D T++VWD++
Sbjct: 213 KQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVR 254
Score = 176 (67.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 58/193 (30%), Positives = 93/193 (48%)
Query: 226 QFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD 285
Q L S S D I++ WD KK + + F + T +C F E + SG D
Sbjct: 154 QLLCSGSDDRTIKI-WD----ARKKHAAHTLESPFQV---TAVC--FGDTGEQVISGGID 203
Query: 286 GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS---G-KL 341
++K+W IR L L R HS+ +T + S +G IL+ + D+T R+ ++ G +
Sbjct: 204 NEVKIWDIRKQAVLHHL-RGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERC 262
Query: 342 LKEFRGHSSYVNDAIFT---NDGS-RVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
+K F+GH + + GS ++ + S+D V +WD+ + L +K P G +
Sbjct: 263 VKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRIL--YKLP----GHN 316
Query: 398 ASVNSVHLFPKNP 410
SVN+V PK P
Sbjct: 317 GSVNAVDFSPKEP 329
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 57/240 (23%), Positives = 104/240 (43%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERA-HSEGVTSLVFSRDGSQ 321
H+ + EF + E+L S D +I +W++ C + + HS V F+ DGS
Sbjct: 54 HEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYE-DCENVMAMSGHSGAVMEAHFTPDGSH 112
Query: 322 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKS 380
I + S D T + +G+ + F+GH ++VN + G +++ + S D T+K+WD +
Sbjct: 113 IFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARK 172
Query: 381 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKR 440
T + P V +V F + ++ + + I ++ Q V G
Sbjct: 173 KHAAHTLESP-------FQVTAV-CFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHS 224
Query: 441 EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS-GKLEHLMKVHEKDVIGVTHHPHRNLL 499
+ +SP+G++I D L + + E +KV + G H+ +NLL
Sbjct: 225 D--TITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQ----GHQHNFEKNLL 278
Score = 146 (56.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 59/242 (24%), Positives = 103/242 (42%)
Query: 273 SRDSEMLASGSQDGKIKVWRIRSGQC-LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 331
+RD +L SG V R + Q + +LE H + + F +G +LS+ FD
Sbjct: 28 NRDKALLESG-------VRRTSNLQAPIMQLE-GHEGEIFTAEFHPEGELLLSSGFDRQI 79
Query: 332 RIHGL-KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
I + + + + GHS V +A FT DGS + T S+D T+ WD+ + + FK
Sbjct: 80 YIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFK-- 137
Query: 391 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGG-DFVAAC 449
G VNSV + ++C+ + I + K ++ E A C
Sbjct: 138 ----GHGNFVNSVQGSRRGQQ--LLCSGSDDRTIKIWDAR--KKHAAHTLESPFQVTAVC 189
Query: 450 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 509
GE + G D + + + + H ++ H + G++ P + + T D T++
Sbjct: 190 FGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLR 249
Query: 510 LW 511
+W
Sbjct: 250 VW 251
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 198 (74.8 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 52/195 (26%), Positives = 92/195 (47%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE 277
CA+FSPDG+ +VSCS D I++ WD + K+ + +D + ++F+
Sbjct: 19 CAKFSPDGRLIVSCSEDKTIKI-WDTTN---KQCVNNFSDSVGFAN-----FVDFNPSGT 69
Query: 278 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 337
+AS D +KVW +R + L+ + HS GV + F G+ +++ S D T +I L
Sbjct: 70 CIASAGSDQTVKVWDVRVNKLLQHYQ-VHSGGVNCISFHPSGNYLITASSDGTLKILDLL 128
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW--DLKSTDCLQTFKPPPPLRG 395
G+L+ +GH+ V F+ G + +D V +W + C K
Sbjct: 129 EGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLH 188
Query: 396 GDASVNSVHLFPKNP 410
D+ + + ++P+ P
Sbjct: 189 FDSPPHLLDIYPRTP 203
Score = 178 (67.7 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 41/117 (35%), Positives = 64/117 (54%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV-FSRDGSQ 321
H V C +FS D ++ S S+D IK+W + QC+ + S G + V F+ G+
Sbjct: 13 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF--SDSVGFANFVDFNPSGTC 70
Query: 322 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
I S D T ++ ++ KLL+ ++ HS VN F G+ ++TASSD T+K+ DL
Sbjct: 71 IASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDL 127
Score = 143 (55.4 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 53/208 (25%), Positives = 87/208 (41%)
Query: 306 HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV 365
H+ V FS DG I+S S D T +I + + + F + N F G+ +
Sbjct: 13 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIA 72
Query: 366 TASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM 425
+A SD TVKVWD++ LQ ++ GG VN + P ++++ + ++ I+
Sbjct: 73 SAGSDQTVKVWDVRVNKLLQHYQVHS---GG---VNCISFHPSG-NYLITASSDGTLKIL 125
Query: 426 ---------TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKL 476
TLQG F+ +GG+ A+ + ++ D L+C L
Sbjct: 126 DLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDE-LHCKGLTKRNL 184
Query: 477 EHL---MKVHEKDVIGVTHHPHRNLLAT 501
+ L H D+ T HPH + T
Sbjct: 185 KRLHFDSPPHLLDIYPRTPHPHEEKVET 212
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 196 (74.1 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 70/258 (27%), Positives = 119/258 (46%)
Query: 214 SH--AECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 271
SH ++CA S D + +S S+D I + WD G + F+ H VL +
Sbjct: 63 SHFVSDCA-LSFDSHYALSASWDKTIRL-WDLEKG--------ECTHQFVGHTSDVLSVS 112
Query: 272 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRL-ERAHSEGVTSLVFSR--DGSQILSTSFD 328
S D+ + SGS+D IK+W I G C + + HS+ V+ + FS D +S +D
Sbjct: 113 ISPDNRQVVSGSRDKTIKIWNI-IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWD 171
Query: 329 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
++ L++ L GH+ YV+ + DGS + D T+ +WDL + L + +
Sbjct: 172 KAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLE 231
Query: 389 PPPPLRGGDASVNSVHLFPKNPDHIVVCNKT-SSIYIMTLQGQ------VVKSFSSGKRE 441
A++N++ +F +P+ +C T SSI I L+ Q V GK+
Sbjct: 232 -------AKANINAL-VF--SPNRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKS 281
Query: 442 GG-DFVAACVSPKGEWIY 458
+ ++ SP G+ ++
Sbjct: 282 SEPECISLTWSPDGQTLF 299
Score = 174 (66.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 63/228 (27%), Positives = 100/228 (43%)
Query: 277 EMLASGSQDGKIKVWR-IRS----GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 331
++L SGS+D I +W +R G RRL HS V+ S D LS S+D T
Sbjct: 29 DILLSGSRDKSIILWNLVRDDVNYGVAQRRLT-GHSHFVSDCALSFDSHYALSASWDKTI 87
Query: 332 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 391
R+ L+ G+ +F GH+S V + D +VV+ S D T+K+W++ +C T
Sbjct: 88 RLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIG-NCKYTITD-- 144
Query: 392 PLRGGDASVNSVHLFPKNPDHI--VVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 449
GG + S F NPD++ V ++ + L+ +++ G G A
Sbjct: 145 ---GGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHT--GYVSAVT 199
Query: 450 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEK-DVIGVTHHPHR 496
+SP G G D L + HL + K ++ + P+R
Sbjct: 200 ISPDGSLCASGGRDGTLMLWDLNEST--HLYSLEAKANINALVFSPNR 245
Score = 151 (58.2 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 63/223 (28%), Positives = 99/223 (44%)
Query: 299 LRRLERAHSEGVTSLVFSRDGSQIL-STSFDSTARIHGL-----KSGKLLKEFRGHSSYV 352
LR HS VTSL + + IL S S D + + L G + GHS +V
Sbjct: 7 LRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFV 66
Query: 353 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 412
+D + D ++AS D T+++WDL+ +C F G + V SV + P N
Sbjct: 67 SDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFV------GHTSDVLSVSISPDNRQ- 119
Query: 413 IVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCV--GEDRNLYC 468
+V ++ +I I + G + + G D+V+ CV SP + + V G D+ +
Sbjct: 120 VVSGSRDKTIKIWNIIGNCKYTITDGGHS--DWVS-CVRFSPNPDNLTFVSAGWDKAVKV 176
Query: 469 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ ++ L H V VT P +L A+ G D T+ LW
Sbjct: 177 WDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLW 219
Score = 148 (57.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 54/169 (31%), Positives = 79/169 (46%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ-ADETFMMHDETVLCIEFSRDSEMLA 280
+PD L+S S D I ++W+ + + D+ Y A H V S DS
Sbjct: 27 NPD--ILLSGSRDKSI-ILWNLV----RDDVNYGVAQRRLTGHSHFVSDCALSFDSHYAL 79
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG- 339
S S D I++W + G+C + H+ V S+ S D Q++S S D T +I +
Sbjct: 80 SASWDKTIRLWDLEKGECTHQFV-GHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNC 138
Query: 340 KLLKEFRGHSSYVNDAIFT-N-DGSRVVTASSDCTVKVWDLKSTDCLQT 386
K GHS +V+ F+ N D V+A D VKVWDL+ T L+T
Sbjct: 139 KYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLE-TFSLRT 186
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 180 (68.4 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 54/171 (31%), Positives = 81/171 (47%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
KF +KS A+ F P +++ I++ WDY G L + F HD V
Sbjct: 4 KFESKSSRAKGIAFHPKRPWILVSLHSSTIQL-WDYRMGTLI--------DRFEEHDGPV 54
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
I+F + SG D KIKVW ++ +CL L H + V ++ F + ILS S
Sbjct: 55 RGIDFHPTQPLFVSGGDDYKIKVWNYQTRRCLFTLN-GHLDYVRTVFFHPELPWILSASD 113
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
D T RI ++ L+ GH+ YV A F + +AS D +V++WD+
Sbjct: 114 DQTIRIWNWQNRSLICTMTGHNHYVMCAQFHPTEDLIASASLDQSVRIWDI 164
Score = 78 (32.5 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 431 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDR--NLYCFSHQSGKLEHLMKVHEKDVI 488
VVK G G ++VA P I G+DR L+ S + H ++
Sbjct: 200 VVKFVLEGHDRGVNWVA--FHPSLPLIVSAGDDRLIKLWRMSDTKAWEVDTCRGHFQNAS 257
Query: 489 GVTHHPHRNLLATYGEDCTMKLW 511
HPH++L+ + GED T++ W
Sbjct: 258 ACLFHPHQDLILSVGEDKTIRAW 280
Score = 67 (28.6 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 469 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
F + ++ +++ H++ V V HP L+ + G+D +KLW+
Sbjct: 194 FGNTDAVVKFVLEGHDRGVNWVAFHPSLPLIVSAGDDRLIKLWR 237
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 204 (76.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 54/183 (29%), Positives = 89/183 (48%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + E + S + +V+ S G I V WD + K+ + T + H + +
Sbjct: 61 GHTTPIESLQISAKEELIVAGSQSGSIRV-WDLEAAKILR--------TLLGHKANICSL 111
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F +ASGS D IK+W +R C+ + ++H++ V L FS DG + S + D T
Sbjct: 112 DFHPYGSFVASGSLDTDIKLWDVRRKGCIFKY-KSHTQAVRCLRFSPDGKWLASAADDHT 170
Query: 331 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS---TDCLQTF 387
++ L +GK++ EF GHS VN F + + SSD T++ WDL+ C++
Sbjct: 171 VKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEE 230
Query: 388 KPP 390
P
Sbjct: 231 ATP 233
Score = 151 (58.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 33/132 (25%), Positives = 63/132 (47%)
Query: 258 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 316
+ + H V + + + +LA+G D ++ VW + C+ L H+ + SL S
Sbjct: 14 QEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLT-GHTTPIESLQIS 72
Query: 317 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
I++ S + R+ L++ K+L+ GH + + F GS V + S D +K+W
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW 132
Query: 377 DLKSTDCLQTFK 388
D++ C+ +K
Sbjct: 133 DVRRKGCIFKYK 144
Score = 140 (54.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 48/212 (22%), Positives = 90/212 (42%)
Query: 305 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 363
AHS V+SLV + ++L+T D + + + GH++ + +
Sbjct: 18 AHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEEL 77
Query: 364 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 423
+V S +++VWDL++ L+T L G A++ S+ P + + + I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LLGHKANICSLDFHPYG-SFVASGSLDTDIK 130
Query: 424 IMTLQ--GQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHL 479
+ ++ G + K + S + C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDVRRKGCIFK-YKSHTQ-----AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE 184
Query: 480 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H V V HP LLA+ D T++ W
Sbjct: 185 FTGHSGPVNVVEFHPSEYLLASGSSDRTIRFW 216
Score = 128 (50.1 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 54/231 (23%), Positives = 99/231 (42%)
Query: 153 SVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGT 212
SV P+ +M+L G + Q + + + G+ + V D+ + T+ G
Sbjct: 49 SVNKPNCVMSLTGHTTPIESLQ--ISAKEEL-IVAGSQSGSIRVWDLEAAKILRTL-LGH 104
Query: 213 KSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEF 272
K++ F P G F+ S S D I++ WD +K ++ + H + V C+ F
Sbjct: 105 KANICSLDFHPYGSFVASGSLDTDIKL-WDVR----RKGCIFK----YKSHTQAVRCLRF 155
Query: 273 SRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 332
S D + LAS + D +K+W + +G+ + HS V + F + S S D T R
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKVMFEFT-GHSGPVNVVEFHPSEYLLASGSSDRTIR 214
Query: 333 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
L+ ++ ++ V +F DG + D +++V+ + C
Sbjct: 215 FWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGWEPERC 264
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 203 (76.5 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 42/118 (35%), Positives = 66/118 (55%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H V C++F +S +A+GS D +++W R G +R L H V +L FS +G +
Sbjct: 437 HLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVR-LFTGHRGPVLTLAFSPNGKYL 495
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
S D ++ L SG L K+ RGH+ ++ F+ D S V +AS D TV+VWD+++
Sbjct: 496 ASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRN 553
Score = 176 (67.0 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 63/218 (28%), Positives = 100/218 (45%)
Query: 295 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 354
SG ++ L R HS V F D S +LS S DST R LKS +RGH+ V D
Sbjct: 343 SGSEIKTL-RGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWD 401
Query: 355 AIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV 414
+ TAS D T ++W T L+ + G + V+ V P N ++I
Sbjct: 402 VDVSPCSLYFSTASHDRTARLWSFARTYPLRLYA------GHLSDVDCVKFHP-NSNYIA 454
Query: 415 VCNKTSSIYIM-TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS 473
+ ++ + T QG V+ F+ G R G + SP G+++ GED+ L + S
Sbjct: 455 TGSTDKTVRLWSTRQGASVRLFT-GHR--GPVLTLAFSPNGKYLASAGEDQRLKLWDLAS 511
Query: 474 GKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
G L ++ H + ++ +L+A+ D T+++W
Sbjct: 512 GGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVW 549
Score = 176 (67.0 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 67/252 (26%), Positives = 111/252 (44%)
Query: 263 HDETVL-CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERA-HSEGVTSLVFSRDGS 320
H E +L E S DS +LA+G + +K+W +R+ R+L+ H V+ + + D
Sbjct: 278 HTEQLLNTAEVSADSRLLAAGFDNSAVKLWSLRA----RKLKAGPHKADVSKIRLACD-- 331
Query: 321 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
+L D SG +K RGHS V F D S +++ S D TV+ WDLKS
Sbjct: 332 -VLEEEADDEDA-----SGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKS 385
Query: 381 -TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGK 439
T+ + P+ D V+ L+ H ++T+ ++ + ++ ++ G
Sbjct: 386 FTNTVLYRGHAYPV--WDVDVSPCSLYFSTASH----DRTARLWSFA-RTYPLRLYA-GH 437
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 499
D V P +I D+ + +S + G L H V+ + P+ L
Sbjct: 438 LSDVDCVK--FHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYL 495
Query: 500 ATYGEDCTMKLW 511
A+ GED +KLW
Sbjct: 496 ASAGEDQRLKLW 507
Score = 156 (60.0 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 37/128 (28%), Positives = 66/128 (51%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G S +C +F P+ ++ + S D + + W G + F H VL +
Sbjct: 436 GHLSDVDCVKFHPNSNYIATGSTDKTVRL-WSTRQGASVR--------LFTGHRGPVLTL 486
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
FS + + LAS +D ++K+W + SG + L R H++ ++SL FS+D S + S S D+T
Sbjct: 487 AFSPNGKYLASAGEDQRLKLWDLASGGLFKDL-RGHTDTISSLSFSQDSSLVASASMDNT 545
Query: 331 ARIHGLKS 338
R+ +++
Sbjct: 546 VRVWDIRN 553
Score = 130 (50.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 43/160 (26%), Positives = 67/160 (41%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
F D L+SCS D + WD S + Y+ H V ++ S S +
Sbjct: 362 FLTDASGLLSCSEDSTVRY-WDLKS--FTNTVLYRG------HAYPVWDVDVSPCSLYFS 412
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+ S D ++W LR L H V + F + + I + S D T R+ + G
Sbjct: 413 TASHDRTARLWSFARTYPLR-LYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGA 471
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
++ F GH V F+ +G + +A D +K+WDL S
Sbjct: 472 SVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLAS 511
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 206 (77.6 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 76/297 (25%), Positives = 132/297 (44%)
Query: 220 RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADET--FMMHDETVLCIEFSRDSE 277
+FSP+ + LV+ S+ G ++ W L + L+ H + L +E S D
Sbjct: 223 QFSPNSKLLVTASWSGLCKL-WKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEES-DVN 280
Query: 278 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 337
M AS + DG +K+W + S + + +E HS V + + G + +T +D + R+ L+
Sbjct: 281 M-ASCAADGSVKLWSLDSDEPIADIE-GHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLE 338
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
+ + GHS V+D F DGS T D +VWDL++ C+ F L G
Sbjct: 339 VQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVM-F-----LEGHI 392
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKREGGDFVAAC-VSPK-G 454
+ S++ P N H+ + ++ + L Q + + + + + + V++ P G
Sbjct: 393 KEIYSINFSP-NGFHVATGSGDNACKVWDLRQRRCIYTIPAHQ----NLVSSVKFQPNDG 447
Query: 455 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
++ D ++H + HE V+GV P L+AT D T KLW
Sbjct: 448 HYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 38 (18.4 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 87 LRELDTARAILRQTQAMGVMKQEQPERYLR 116
++ LD ARA ++ +KQ++ + LR
Sbjct: 175 VKRLDAARAQKEIPESTRTIKQQELHKNLR 204
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 173 (66.0 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 51/171 (29%), Positives = 81/171 (47%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
KF +KS A+ F P +++ F I++ WDY G L F H+ V
Sbjct: 6 KFESKSTRAKGIAFHPSRPWVLVALFSSTIQL-WDYRMGTLL--------HRFEDHEGPV 56
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
++F + S D IKVW + + +CL L H + V ++ F R+ I+S S
Sbjct: 57 RGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLT-GHLDYVRTVFFHRELPWIISASD 115
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
D T RI ++ K + GH+ +V A F +V+AS D T+++WD+
Sbjct: 116 DQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDI 166
Score = 94 (38.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 26/88 (29%), Positives = 36/88 (40%)
Query: 299 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
L + E + S + F +L F ST ++ + G LL F H V F
Sbjct: 4 LTKFE-SKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFH 62
Query: 359 NDGSRVVTASSDCTVKVWDLKSTDCLQT 386
V+A D T+KVW L + CL T
Sbjct: 63 PTQPIFVSAGDDYTIKVWSLDTNKCLYT 90
Score = 84 (34.6 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 431 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 488
VVK G G ++ A P I +DR + + + K + + H +V
Sbjct: 200 VVKFILEGHTRGVNW--ASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVD 257
Query: 489 GVTHHPHRNLLATYGEDCTMKLW 511
V HPH+NL+ + GED T+++W
Sbjct: 258 SVIFHPHQNLIISVGEDKTLRVW 280
Score = 50 (22.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 476 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
++ +++ H + V + HP L+ + +D +KLW+
Sbjct: 201 VKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWR 237
Score = 40 (19.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREG 442
+++N + N D ++ ++YI +QG++V + REG
Sbjct: 548 STLNHIRYSLLNGDRGIIKTLEKTLYITKVQGKLVYCLN---REG 589
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 202 (76.2 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 62/239 (25%), Positives = 112/239 (46%)
Query: 228 LVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGK 287
+VS S D + V WD +G Q M H V C+++ D + SG+ D
Sbjct: 354 VVSGSRDATLRV-WDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFM 402
Query: 288 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG 347
+KVW + CL L+ H+ V SL F DG ++S S D++ R+ +++G + G
Sbjct: 403 VKVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG 459
Query: 348 HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFP 407
H S + + D +V+ ++D TVK+WD+K+ CLQT L+G + ++V
Sbjct: 460 HQS-LTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQT------LQGPNKHQSAVTCLQ 511
Query: 408 KNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN 465
N + ++ + ++ + L+ G+ +++ + + G V + + C RN
Sbjct: 512 FNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 570
Score = 184 (69.8 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 70/256 (27%), Positives = 120/256 (46%)
Query: 263 HDETVL-CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 321
HD+ V+ C++F + SGS D +KVW +G+CLR L H+ GV S RD
Sbjct: 259 HDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQM-RDNI- 313
Query: 322 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 381
I+S S D T ++ ++G+ + GH+S V + ++ RVV+ S D T++VWD+++
Sbjct: 314 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE-KRVVSGSRDATLRVWDIETG 371
Query: 382 DCLQTFKPPPPLRGGDASVNSVHLFPKNP-----DHIV-VCNKTSSIYIMTLQGQVVKSF 435
CL L G A+V V + D +V V + + + TLQG + +
Sbjct: 372 QCLHV------LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 425
Query: 436 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 495
S + +G V+ + D ++ + ++G H + H+ G+
Sbjct: 426 SL-QFDGIHVVSGSL------------DTSIRVWDVETGNCIHTLTGHQSLTSGMELKD- 471
Query: 496 RNLLATYGEDCTMKLW 511
N+L + D T+K+W
Sbjct: 472 -NILVSGNADSTVKIW 486
Score = 139 (54.0 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 45/150 (30%), Positives = 75/150 (50%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
V D T HT++ G + +F DG +VS S D I V WD +G
Sbjct: 405 VWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRV-WDVETGN-------- 452
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSL 313
T H +E +D+ +L SG+ D +K+W I++GQCL+ L+ H VT L
Sbjct: 453 CIHTLTGHQSLTSGMEL-KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 510
Query: 314 VFSRDGSQILSTSFDSTARIHGLKSGKLLK 343
F+++ ++++S D T ++ LK+G+ ++
Sbjct: 511 QFNKNF--VITSSDDGTVKLWDLKTGEFIR 538
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 47/193 (24%), Positives = 90/193 (46%)
Query: 321 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
+++S S D+T R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++
Sbjct: 353 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 410
Query: 381 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 439
CL T L+G N V+ + H+V + +SI + ++ G + + +
Sbjct: 411 ETCLHT------LQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--- 458
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP-HRNL 498
G + + + K + D + + ++G+ ++ K VT ++N
Sbjct: 459 --GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF 516
Query: 499 LATYGEDCTMKLW 511
+ T +D T+KLW
Sbjct: 517 VITSSDDGTVKLW 529
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 202 (76.2 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 62/239 (25%), Positives = 112/239 (46%)
Query: 228 LVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGK 287
+VS S D + V WD +G Q M H V C+++ D + SG+ D
Sbjct: 394 VVSGSRDATLRV-WDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFM 442
Query: 288 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG 347
+KVW + CL L+ H+ V SL F DG ++S S D++ R+ +++G + G
Sbjct: 443 VKVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG 499
Query: 348 HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFP 407
H S + + D +V+ ++D TVK+WD+K+ CLQT L+G + ++V
Sbjct: 500 HQS-LTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQT------LQGPNKHQSAVTCLQ 551
Query: 408 KNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN 465
N + ++ + ++ + L+ G+ +++ + + G V + + C RN
Sbjct: 552 FNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 610
Score = 184 (69.8 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 70/256 (27%), Positives = 120/256 (46%)
Query: 263 HDETVL-CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 321
HD+ V+ C++F + SGS D +KVW +G+CLR L H+ GV S RD
Sbjct: 299 HDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQM-RDNI- 353
Query: 322 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 381
I+S S D T ++ ++G+ + GH+S V + ++ RVV+ S D T++VWD+++
Sbjct: 354 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE-KRVVSGSRDATLRVWDIETG 411
Query: 382 DCLQTFKPPPPLRGGDASVNSVHLFPKNP-----DHIV-VCNKTSSIYIMTLQGQVVKSF 435
CL L G A+V V + D +V V + + + TLQG + +
Sbjct: 412 QCLHV------LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 465
Query: 436 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 495
S + +G V+ + D ++ + ++G H + H+ G+
Sbjct: 466 SL-QFDGIHVVSGSL------------DTSIRVWDVETGNCIHTLTGHQSLTSGMELKD- 511
Query: 496 RNLLATYGEDCTMKLW 511
N+L + D T+K+W
Sbjct: 512 -NILVSGNADSTVKIW 526
Score = 139 (54.0 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 45/150 (30%), Positives = 75/150 (50%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
V D T HT++ G + +F DG +VS S D I V WD +G
Sbjct: 445 VWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRV-WDVETGN-------- 492
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSL 313
T H +E +D+ +L SG+ D +K+W I++GQCL+ L+ H VT L
Sbjct: 493 CIHTLTGHQSLTSGMEL-KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 550
Query: 314 VFSRDGSQILSTSFDSTARIHGLKSGKLLK 343
F+++ ++++S D T ++ LK+G+ ++
Sbjct: 551 QFNKNF--VITSSDDGTVKLWDLKTGEFIR 578
Score = 123 (48.4 bits), Expect = 0.00031, P = 0.00031
Identities = 47/193 (24%), Positives = 90/193 (46%)
Query: 321 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
+++S S D+T R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++
Sbjct: 393 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 450
Query: 381 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 439
CL T L+G N V+ + H+V + +SI + ++ G + + +
Sbjct: 451 ETCLHT------LQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--- 498
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP-HRNL 498
G + + + K + D + + ++G+ ++ K VT ++N
Sbjct: 499 --GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF 556
Query: 499 LATYGEDCTMKLW 511
+ T +D T+KLW
Sbjct: 557 VITSSDDGTVKLW 569
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 199 (75.1 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 52/170 (30%), Positives = 79/170 (46%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMH-DETVLC 269
G + ++ P G L SCS D +++ W DLQ + E + + T
Sbjct: 361 GHTNEVNAIKWDPSGMLLASCSDDMTLKI-WSMKQDTCVHDLQAHSKEIYTIKWSPTGPA 419
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
S MLAS S D +++W + G CL L + H E V S+ FS DG + S SFD
Sbjct: 420 TSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTK-HQEPVYSVAFSPDGKYLASGSFDK 478
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
I +SG L+ +RG + + + G +V ++SD +V V DL+
Sbjct: 479 CVHIWNTQSGSLVHSYRGTGG-IFEVCWNARGDKVGASASDGSVCVLDLR 527
Score = 153 (58.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 40/140 (28%), Positives = 69/140 (49%)
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
+TF H V I++ +LAS S D +K+W ++ C+ L+ AHS+ + ++ +S
Sbjct: 357 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQ-AHSKEIYTIKWSP 415
Query: 318 DG-------SQIL--STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 368
G S I+ S SFDST R+ ++ G L H V F+ DG + + S
Sbjct: 416 TGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGS 475
Query: 369 SDCTVKVWDLKSTDCLQTFK 388
D V +W+ +S + +++
Sbjct: 476 FDKCVHIWNTQSGSLVHSYR 495
Score = 136 (52.9 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 68/343 (19%), Positives = 130/343 (37%)
Query: 155 VPPSRLMALIGQALK-----WQQHQGLLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIK 209
+PPS+ L G + W LL G+ R + L H I+
Sbjct: 171 IPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 230
Query: 210 FG---TKSHAECAR--FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHD 264
G S+ + ++ DG L + S+DGF + W G L T H
Sbjct: 231 EGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARI-WTE-DGNLAS--------TLGQHK 280
Query: 265 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILS 324
+ +++++ + S D +W +G+ ++ HS + + ++ + S
Sbjct: 281 GPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFP-FHSAPALDVDW-QNNTTFAS 338
Query: 325 TSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL 384
S D + L + +K F+GH++ VN + G + + S D T+K+W +K C+
Sbjct: 339 CSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCV 398
Query: 385 QTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK---- 439
L+ + ++ P P N SSI + + V+ + +
Sbjct: 399 HD------LQAHSKEIYTIKWSPTGP---ATSNPNSSIMLASASFDSTVRLWDVERGVCL 449
Query: 440 ----REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 478
+ + SP G+++ D+ ++ ++ QSG L H
Sbjct: 450 HTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVH 492
Score = 127 (49.8 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 54/255 (21%), Positives = 106/255 (41%)
Query: 264 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
++ V ++++ D +LA+GS DG ++W G L + H + +L +++ G+ IL
Sbjct: 239 NKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQ-HKGPIFALKWNKKGNYIL 296
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
S D T I +G+ ++F HS+ D + N+ + + S+D + V L
Sbjct: 297 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN-TTFASCSTDMCIHVCRLGCDRP 355
Query: 384 LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKRE- 441
++TF+ G VN++ P + C+ ++ I ++ Q V + +E
Sbjct: 356 VKTFQ------GHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQDTCVHDLQAHSKEI 408
Query: 442 ----GGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 496
A +P + D + + + G H + H++ V V P
Sbjct: 409 YTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDG 468
Query: 497 NLLATYGEDCTMKLW 511
LA+ D + +W
Sbjct: 469 KYLASGSFDKCVHIW 483
Score = 45 (20.9 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 9/33 (27%), Positives = 22/33 (66%)
Query: 153 SVVPPSRLMALIGQALKWQQHQ-GLLPPGTQFD 184
++VPP+ L++++ + L++ + + + GT FD
Sbjct: 42 TLVPPAALISILQKGLQYVEAEISINEDGTVFD 74
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 201 (75.8 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 82/325 (25%), Positives = 131/325 (40%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
E Y P H TK + F G L+SCS D I++ W+ + +
Sbjct: 273 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHMLLSCSMDCKIKL-WEVYGDR-------R 324
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
TF+ H + V I F+ S + D IK+W +GQC+ R
Sbjct: 325 CLRTFIGHGKAVRDICFNNAGTRFLSAAYDRYIKLWDTETGQCISRFTNRKVPYCVKFNP 384
Query: 316 SRDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++
Sbjct: 385 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLR 444
Query: 375 VWDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 432
VW+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 445 VWEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF- 495
Query: 433 KSFSSGKREGGDFVA--AC---VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDV 487
+ K G VA AC SP ++ D L + ++ KL +K H+K
Sbjct: 496 -RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRIKAHDKVC 554
Query: 488 IGVTHHPHR-NLLATYGEDCTMKLW 511
IG HPH + + T G D +KLW
Sbjct: 555 IGAVWHPHETSKVITCGWDGLIKLW 579
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 197 (74.4 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 72/299 (24%), Positives = 126/299 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + C +F P G L S FD I ++W+ D A T H V+ +
Sbjct: 91 GHEGEVYCCKFHPWGNTLASAGFDRLI-LLWNVYG-----DCDNYA--TLKGHSGAVMEL 142
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDS 329
++ D ML S S D + VW +G+ ++RL + H+ V S +R G Q++ T S D
Sbjct: 143 HYNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDG 201
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFK 388
T ++ ++ ++ F+ ++Y A+ ND S ++++ D +KVWDL+ T +
Sbjct: 202 TVKLWDIRKKAAVQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 259
Query: 389 P-PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVA 447
+ G S +L D+ V + + + + VK F +
Sbjct: 260 GHADSVTGLSLSSEGSYLLSNAMDNTV---RIWDVRPFAPKERCVKIFQGNVHNFEKNLL 316
Query: 448 ACV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 505
C SP G I DR +Y + S ++ + + H V + HP ++ + D
Sbjct: 317 RCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSD 375
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 48/222 (21%), Positives = 95/222 (42%)
Query: 292 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSS 350
R S Q L H V F G+ + S FD + + +GHS
Sbjct: 78 RCSSLQAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSG 137
Query: 351 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 410
V + + DGS + +AS+D TV VWD ++ + ++ L+G + VNS + + P
Sbjct: 138 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR------LKGHTSFVNSCYPARRGP 191
Query: 411 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 469
+ + ++ + ++ + V++F + + +A + + I G D ++ +
Sbjct: 192 QLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQ----VLAVTFNDTSDQIISGGIDNDIKVW 247
Query: 470 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ KL + M+ H V G++ + L + D T+++W
Sbjct: 248 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIW 289
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 202 (76.2 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 62/239 (25%), Positives = 112/239 (46%)
Query: 228 LVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGK 287
+VS S D + V WD +G Q M H V C+++ D + SG+ D
Sbjct: 474 VVSGSRDATLRV-WDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFM 522
Query: 288 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG 347
+KVW + CL L+ H+ V SL F DG ++S S D++ R+ +++G + G
Sbjct: 523 VKVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG 579
Query: 348 HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFP 407
H S + + D +V+ ++D TVK+WD+K+ CLQT L+G + ++V
Sbjct: 580 HQS-LTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQT------LQGPNKHQSAVTCLQ 631
Query: 408 KNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN 465
N + ++ + ++ + L+ G+ +++ + + G V + + C RN
Sbjct: 632 FNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 690
Score = 184 (69.8 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 70/256 (27%), Positives = 120/256 (46%)
Query: 263 HDETVL-CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 321
HD+ V+ C++F + SGS D +KVW +G+CLR L H+ GV S RD
Sbjct: 379 HDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQM-RDNI- 433
Query: 322 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 381
I+S S D T ++ ++G+ + GH+S V + ++ RVV+ S D T++VWD+++
Sbjct: 434 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE-KRVVSGSRDATLRVWDIETG 491
Query: 382 DCLQTFKPPPPLRGGDASVNSVHLFPKNP-----DHIV-VCNKTSSIYIMTLQGQVVKSF 435
CL L G A+V V + D +V V + + + TLQG + +
Sbjct: 492 QCLHV------LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 545
Query: 436 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 495
S + +G V+ + D ++ + ++G H + H+ G+
Sbjct: 546 SL-QFDGIHVVSGSL------------DTSIRVWDVETGNCIHTLTGHQSLTSGMELKD- 591
Query: 496 RNLLATYGEDCTMKLW 511
N+L + D T+K+W
Sbjct: 592 -NILVSGNADSTVKIW 606
Score = 139 (54.0 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 45/150 (30%), Positives = 75/150 (50%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
V D T HT++ G + +F DG +VS S D I V WD +G
Sbjct: 525 VWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRV-WDVETGN-------- 572
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSL 313
T H +E +D+ +L SG+ D +K+W I++GQCL+ L+ H VT L
Sbjct: 573 CIHTLTGHQSLTSGMEL-KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 630
Query: 314 VFSRDGSQILSTSFDSTARIHGLKSGKLLK 343
F+++ ++++S D T ++ LK+G+ ++
Sbjct: 631 QFNKNF--VITSSDDGTVKLWDLKTGEFIR 658
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 47/193 (24%), Positives = 90/193 (46%)
Query: 321 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
+++S S D+T R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++
Sbjct: 473 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 530
Query: 381 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 439
CL T L+G N V+ + H+V + +SI + ++ G + + +
Sbjct: 531 ETCLHT------LQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--- 578
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP-HRNL 498
G + + + K + D + + ++G+ ++ K VT ++N
Sbjct: 579 --GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF 636
Query: 499 LATYGEDCTMKLW 511
+ T +D T+KLW
Sbjct: 637 VITSSDDGTVKLW 649
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 203 (76.5 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 60/201 (29%), Positives = 93/201 (46%)
Query: 230 SCSFDGF-IEVVWDYLSGKLKK-DLQY-QADETFMMHDETVLCIEFSRDSEMLASGSQDG 286
S +FD + V SG +K DL+ + T H + ++F E ASGS D
Sbjct: 64 SVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
Query: 287 KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFR 346
+K+W IR C+ + H+ GV L F+ DG ++S D+ ++ L +GKLL EF+
Sbjct: 124 NLKIWDIRKKGCIHTY-KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK 182
Query: 347 GHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLF 406
H + F + T S+D TVK WDL++ + + + GG + V
Sbjct: 183 SHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGS--------GGPETAG-VRCL 233
Query: 407 PKNPD-HIVVCNKTSSIYIMT 426
NPD V+C S+ I +
Sbjct: 234 SFNPDGKTVLCGLQESLKIFS 254
Score = 172 (65.6 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 51/198 (25%), Positives = 91/198 (45%)
Query: 254 YQADETFMMHDETVLCIEFSR-DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTS 312
Y+ E F+ H V C++ R S +L +G +D K+ +W I + L HS G+ S
Sbjct: 7 YKLQE-FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY-GHSSGIDS 64
Query: 313 LVFSRDGSQIL--STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSD 370
+ F D S++L + + T ++ L+ K+++ GH S F G + S D
Sbjct: 65 VTF--DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
Query: 371 CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-G 429
+K+WD++ C+ T+K G VN + P +V + + + + L G
Sbjct: 123 TNLKIWDIRKKGCIHTYK------GHTRGVNVLRFTPDGR-WVVSGGEDNIVKVWDLTAG 175
Query: 430 QVVKSFSS--GKREGGDF 445
+++ F S G+ + DF
Sbjct: 176 KLLTEFKSHEGQIQSLDF 193
Score = 169 (64.5 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 56/210 (26%), Positives = 90/210 (42%)
Query: 305 AHSEGVTSLVFSRDGSQILSTSF-DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 363
AHS V L R S++L T D + + + GHSS ++ F D S
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF--DASE 71
Query: 364 VVTASSDC--TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS 421
V+ A+ T+K+WDL+ ++T L G ++ SV P + + ++
Sbjct: 72 VLVAAGAASGTIKLWDLEEAKIVRT------LTGHRSNCISVDFHPFG-EFFASGSLDTN 124
Query: 422 IYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 481
+ I ++ + G G + + +P G W+ GED + + +GKL K
Sbjct: 125 LKIWDIRKKGCIHTYKGHTRGVNVLR--FTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK 182
Query: 482 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
HE + + HPH LLAT D T+K W
Sbjct: 183 SHEGQIQSLDFHPHEFLLATGSADRTVKFW 212
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 35/118 (29%), Positives = 58/118 (49%)
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDE 265
HT K T+ RF+PDG+++VS D ++V WD +GKL + F H+
Sbjct: 137 HTYKGHTRG-VNVLRFTPDGRWVVSGGEDNIVKV-WDLTAGKLLTE--------FKSHEG 186
Query: 266 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
+ ++F +LA+GS D +K W + + + + + GV L F+ DG +L
Sbjct: 187 QIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGS-GGPETAGVRCLSFNPDGKTVL 243
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 202 (76.2 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 62/239 (25%), Positives = 112/239 (46%)
Query: 228 LVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGK 287
+VS S D + V WD +G Q M H V C+++ D + SG+ D
Sbjct: 479 VVSGSRDATLRV-WDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFM 527
Query: 288 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG 347
+KVW + CL L+ H+ V SL F DG ++S S D++ R+ +++G + G
Sbjct: 528 VKVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG 584
Query: 348 HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFP 407
H S + + D +V+ ++D TVK+WD+K+ CLQT L+G + ++V
Sbjct: 585 HQS-LTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQT------LQGPNKHQSAVTCLQ 636
Query: 408 KNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN 465
N + ++ + ++ + L+ G+ +++ + + G V + + C RN
Sbjct: 637 FNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 695
Score = 184 (69.8 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 70/256 (27%), Positives = 120/256 (46%)
Query: 263 HDETVL-CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 321
HD+ V+ C++F + SGS D +KVW +G+CLR L H+ GV S RD
Sbjct: 384 HDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQM-RDNI- 438
Query: 322 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 381
I+S S D T ++ ++G+ + GH+S V + ++ RVV+ S D T++VWD+++
Sbjct: 439 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE-KRVVSGSRDATLRVWDIETG 496
Query: 382 DCLQTFKPPPPLRGGDASVNSVHLFPKNP-----DHIV-VCNKTSSIYIMTLQGQVVKSF 435
CL L G A+V V + D +V V + + + TLQG + +
Sbjct: 497 QCLHV------LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 550
Query: 436 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 495
S + +G V+ + D ++ + ++G H + H+ G+
Sbjct: 551 SL-QFDGIHVVSGSL------------DTSIRVWDVETGNCIHTLTGHQSLTSGMELKD- 596
Query: 496 RNLLATYGEDCTMKLW 511
N+L + D T+K+W
Sbjct: 597 -NILVSGNADSTVKIW 611
Score = 139 (54.0 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 45/150 (30%), Positives = 75/150 (50%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
V D T HT++ G + +F DG +VS S D I V WD +G
Sbjct: 530 VWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRV-WDVETGN-------- 577
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSL 313
T H +E +D+ +L SG+ D +K+W I++GQCL+ L+ H VT L
Sbjct: 578 CIHTLTGHQSLTSGMEL-KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 635
Query: 314 VFSRDGSQILSTSFDSTARIHGLKSGKLLK 343
F+++ ++++S D T ++ LK+G+ ++
Sbjct: 636 QFNKNF--VITSSDDGTVKLWDLKTGEFIR 663
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 47/193 (24%), Positives = 90/193 (46%)
Query: 321 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
+++S S D+T R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++
Sbjct: 478 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 535
Query: 381 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 439
CL T L+G N V+ + H+V + +SI + ++ G + + +
Sbjct: 536 ETCLHT------LQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--- 583
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP-HRNL 498
G + + + K + D + + ++G+ ++ K VT ++N
Sbjct: 584 --GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF 641
Query: 499 LATYGEDCTMKLW 511
+ T +D T+KLW
Sbjct: 642 VITSSDDGTVKLW 654
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 201 (75.8 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 62/239 (25%), Positives = 111/239 (46%)
Query: 228 LVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGK 287
+VS S D + V WD +G Q M H V C+++ D + SG+ D
Sbjct: 396 VVSGSRDATLRV-WDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFM 444
Query: 288 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG 347
+KVW + CL L+ H+ V SL F DG ++S S D++ R+ +++G + G
Sbjct: 445 VKVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG 501
Query: 348 HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFP 407
H S + + D +V+ ++D TVK+WD+K+ CLQT L+G ++V
Sbjct: 502 HQS-LTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQT------LQGPSKHQSAVTCLQ 553
Query: 408 KNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN 465
N + ++ + ++ + L+ G+ +++ + + G V + + C RN
Sbjct: 554 FNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 612
Score = 184 (69.8 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 70/256 (27%), Positives = 120/256 (46%)
Query: 263 HDETVL-CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 321
HD+ V+ C++F + SGS D +KVW +G+CLR L H+ GV S RD
Sbjct: 301 HDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQM-RDNI- 355
Query: 322 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 381
I+S S D T ++ ++G+ + GH+S V + ++ RVV+ S D T++VWD+++
Sbjct: 356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE-KRVVSGSRDATLRVWDIETG 413
Query: 382 DCLQTFKPPPPLRGGDASVNSVHLFPKNP-----DHIV-VCNKTSSIYIMTLQGQVVKSF 435
CL L G A+V V + D +V V + + + TLQG + +
Sbjct: 414 QCLHV------LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 436 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 495
S + +G V+ + D ++ + ++G H + H+ G+
Sbjct: 468 SL-QFDGIHVVSGSL------------DTSIRVWDVETGNCIHTLTGHQSLTSGMELKD- 513
Query: 496 RNLLATYGEDCTMKLW 511
N+L + D T+K+W
Sbjct: 514 -NILVSGNADSTVKIW 528
Score = 138 (53.6 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 45/150 (30%), Positives = 75/150 (50%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
V D T HT++ G + +F DG +VS S D I V WD +G
Sbjct: 447 VWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRV-WDVETGN-------- 494
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSL 313
T H +E +D+ +L SG+ D +K+W I++GQCL+ L+ H VT L
Sbjct: 495 CIHTLTGHQSLTSGMEL-KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCL 552
Query: 314 VFSRDGSQILSTSFDSTARIHGLKSGKLLK 343
F+++ ++++S D T ++ LK+G+ ++
Sbjct: 553 QFNKNF--VITSSDDGTVKLWDLKTGEFIR 580
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 47/193 (24%), Positives = 90/193 (46%)
Query: 321 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
+++S S D+T R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++
Sbjct: 395 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 452
Query: 381 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 439
CL T L+G N V+ + H+V + +SI + ++ G + + +
Sbjct: 453 ETCLHT------LQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--- 500
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP-HRNL 498
G + + + K + D + + ++G+ ++ K VT ++N
Sbjct: 501 --GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF 558
Query: 499 LATYGEDCTMKLW 511
+ T +D T+KLW
Sbjct: 559 VITSSDDGTVKLW 571
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 198 (74.8 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 82/325 (25%), Positives = 131/325 (40%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
E Y P H TK + F G L+SCS D I++ W+ + +
Sbjct: 137 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKL-WEVYGDR-------R 188
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
TF+ H + V I F+ S + D +K+W +GQC+ R
Sbjct: 189 CLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNP 248
Query: 316 SRDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++
Sbjct: 249 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLR 308
Query: 375 VWDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 432
VW+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 309 VWEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF- 359
Query: 433 KSFSSGKREGGDFVA--AC-VSPKGEWIYCVGEDRN--LYCFSHQSGKLEHLMKVHEKDV 487
+ K G VA AC V + Y + D N L + ++ KL K H+K
Sbjct: 360 -RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVC 418
Query: 488 IGVTHHPHR-NLLATYGEDCTMKLW 511
IG HPH + + T G D +KLW
Sbjct: 419 IGAVWHPHETSKVITCGWDGLIKLW 443
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 198 (74.8 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 82/325 (25%), Positives = 131/325 (40%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
E Y P H TK + F G L+SCS D I++ W+ + +
Sbjct: 140 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKL-WEVYGDR-------R 191
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
TF+ H + V I F+ S + D +K+W +GQC+ R
Sbjct: 192 CLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNP 251
Query: 316 SRDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++
Sbjct: 252 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLR 311
Query: 375 VWDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 432
VW+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 312 VWEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF- 362
Query: 433 KSFSSGKREGGDFVA--AC-VSPKGEWIYCVGEDRN--LYCFSHQSGKLEHLMKVHEKDV 487
+ K G VA AC V + Y + D N L + ++ KL K H+K
Sbjct: 363 -RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVC 421
Query: 488 IGVTHHPHR-NLLATYGEDCTMKLW 511
IG HPH + + T G D +KLW
Sbjct: 422 IGAVWHPHETSKVITCGWDGLIKLW 446
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 200 (75.5 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 84/325 (25%), Positives = 136/325 (41%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
E Y P H TK + F G L+SCS D I++ W+ + G+ ++ L+
Sbjct: 272 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKL-WE-VYGE-RRCLR-- 326
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
TF+ H + V I F+ S + D +K+W +GQC+ R
Sbjct: 327 ---TFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNP 383
Query: 316 SRDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++
Sbjct: 384 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLR 443
Query: 375 VWDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 432
VW+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 444 VWEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF- 494
Query: 433 KSFSSGKREGGDFVA--AC-VSPKGEWIYCVGEDRN--LYCFSHQSGKLEHLMKVHEKDV 487
+ K G VA AC V + Y + D N L + ++ KL K H+K
Sbjct: 495 -RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVC 553
Query: 488 IGVTHHPHR-NLLATYGEDCTMKLW 511
IG HPH + + T G D +KLW
Sbjct: 554 IGAVWHPHETSKVITCGWDGLIKLW 578
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 195 (73.7 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 77/313 (24%), Positives = 136/313 (43%)
Query: 204 LSHTIK--FGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFM 261
L H I G K +F+ G L S D I +W+ + G+ + Y
Sbjct: 51 LEHPIMQLIGHKGEIYSCKFNSYGTALASGGSDKEI-FLWN-VYGEC---INYSV---LK 102
Query: 262 MHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 321
H T+L + +S DS + + D I VW G+ ++R+ R HS V S +R G
Sbjct: 103 GHKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRI-REHSGVVNSCCPARRGPP 161
Query: 322 ILST-SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
++++ S D +ARI +S F+ H V F++ +++T D ++VWD+++
Sbjct: 162 LVASGSDDRSARIFDTRSKGSTHLFQ-HKYPVTSVCFSDASDQLITGGIDNVIRVWDIRN 220
Query: 381 T-DCLQTFKP-PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSG 438
D L T + S + +L + D+ C K I + +K+F+
Sbjct: 221 QEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNS--C-KIWDIRPYAPPNRNIKTFNGA 277
Query: 439 KRE-GGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 497
+ + + + S G I C DR +Y + + +L++ + H V VT HP+
Sbjct: 278 QNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEP 337
Query: 498 LLATYGEDCTMKL 510
++A+ D T+ L
Sbjct: 338 IIASCSSDKTIYL 350
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 44/166 (26%), Positives = 71/166 (42%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FS L++ D I V WD + ++D Y T H +T+ S+D L
Sbjct: 197 FSDASDQLITGGIDNVIRV-WDIRN---QEDPLY----TLASHQDTITSTSVSKDGAYLL 248
Query: 281 SGSQDGKIKVWRIRS----GQCLRRLERAHSEGVTSLV---FSRDGSQILSTSFDSTARI 333
S S D K+W IR + ++ A + +L+ +S DG +I S D I
Sbjct: 249 SNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYI 308
Query: 334 HGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
+ +L GHS VN+ F + + + SSD T+ + ++K
Sbjct: 309 WDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIYLGEIK 354
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 202 (76.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 58/185 (31%), Positives = 84/185 (45%)
Query: 245 SGKLKK-DLQY-QADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL 302
SG +K DL+ + T H + + F E ASGS D +K+W IR C+
Sbjct: 80 SGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY 139
Query: 303 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS 362
+ H+ GV L F+ DG I+S D+ ++ L +GKLL EF+ H + F
Sbjct: 140 -KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEF 198
Query: 363 RVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPD-HIVVCNKTSS 421
+ T S+D TVK WDL +TF+ + G V NPD V+C S
Sbjct: 199 LLATGSADKTVKFWDL------ETFEL---IGSGGTETTGVRCLTFNPDGKSVLCGLQES 249
Query: 422 IYIMT 426
+ I +
Sbjct: 250 LKIFS 254
Score = 181 (68.8 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 55/208 (26%), Positives = 89/208 (42%)
Query: 305 AHSEGVTSLVFSRDGSQILSTSF-DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 363
AHS V L R S++L T D + + + GHSS ++ F
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGL 73
Query: 364 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 423
V ++ T+K+WDL+ ++T L G ++ SV+ P + + +++
Sbjct: 74 VAAGAASGTIKLWDLEEAKVVRT------LTGHRSNCVSVNFHPFG-EFFASGSLDTNLK 126
Query: 424 IMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH 483
I ++ + G G + + +P G WI GED + + +GKL H K H
Sbjct: 127 IWDIRKKGCIHTYKGHTRGVNVLR--FTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH 184
Query: 484 EKDVIGVTHHPHRNLLATYGEDCTMKLW 511
E + + HPH LLAT D T+K W
Sbjct: 185 EGKIQSLDFHPHEFLLATGSADKTVKFW 212
Score = 177 (67.4 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 55/249 (22%), Positives = 104/249 (41%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H + + F ++A+G+ G IK+W + + +R L H S+ F G
Sbjct: 58 HSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLT-GHRSNCVSVNFHPFGEFF 116
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
S S D+ +I ++ + ++GH+ VN FT DG +V+ D VKVWDL +
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGK 176
Query: 383 CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREG 442
L FK + + S+ +P ++ ++ + + + SG E
Sbjct: 177 LLHEFK------SHEGKIQSLDF---HPHEFLLATGSADKTVKFWDLETFELIGSGGTET 227
Query: 443 GDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATY 502
+P G+ + C G +L FS + + + V ++ + H + L +Y
Sbjct: 228 TGVRCLTFNPDGKSVLC-GLQESLKIFSWEPIRCHDGVDVGWSNLSDMNVHEGKLLGCSY 286
Query: 503 GEDCTMKLW 511
++C + +W
Sbjct: 287 NQNC-VGVW 294
Score = 176 (67.0 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 50/196 (25%), Positives = 87/196 (44%)
Query: 254 YQADETFMMHDETVLCIEFSR-DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTS 312
Y+ E F+ H V C++ R S +L +G +D K+ +W I + L HS G+ S
Sbjct: 7 YKLQE-FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY-GHSSGIDS 64
Query: 313 LVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCT 372
+ F + + + T ++ L+ K+++ GH S F G + S D
Sbjct: 65 VTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTN 124
Query: 373 VKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQV 431
+K+WD++ C+ T+K G VN + P IV + + + + L G++
Sbjct: 125 LKIWDIRKKGCIHTYK------GHTRGVNVLRFTPDGR-WIVSGGEDNVVKVWDLTAGKL 177
Query: 432 VKSFSS--GKREGGDF 445
+ F S GK + DF
Sbjct: 178 LHEFKSHEGKIQSLDF 193
Score = 135 (52.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 46/196 (23%), Positives = 86/196 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGK 247
G A+ + D+ + T+ G +S+ F P G+F S S D +++ WD
Sbjct: 77 GAASGTIKLWDLEEAKVVRTLT-GHRSNCVSVNFHPFGEFFASGSLDTNLKI-WDIR--- 131
Query: 248 LKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 307
KK + T+ H V + F+ D + SG +D +KVW + +G+ L ++H
Sbjct: 132 -KKGCIH----TYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEF-KSHE 185
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
+ SL F + + S D T + L++ +L+ ++ V F DG V+
Sbjct: 186 GKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCG 245
Query: 368 SSDCTVKVWDLKSTDC 383
+ ++K++ + C
Sbjct: 246 LQE-SLKIFSWEPIRC 260
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 193 (73.0 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 68/243 (27%), Positives = 110/243 (45%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+D + + WD G + F+ H + VL + FS D+ + S
Sbjct: 78 SSDGQFALSGSWDKTLRL-WDLNQGVSTRQ--------FISHTKDVLSVAFSADNRQIVS 128
Query: 282 GSQDGKIKVWRIRSGQCLRRL-ERAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W + QC + + H++ V+++ FS I+S +D ++ L +
Sbjct: 129 GSRDKSIKLWNTLA-QCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGN 187
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
+L GH+ YVN + DGS + D +WDL L T L G D
Sbjct: 188 CRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LPGNDV 241
Query: 399 SVNSVHLFPKNPDHIVVCNKT-SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWI 457
+N++ +P+ +C SSI I L+ + K K E +A+ S +G
Sbjct: 242 -INAMSF---SPNRYWLCAAVGSSIKIWDLEDK--KEIEELKPE----IASSGSSRGSSP 291
Query: 458 YCV 460
C+
Sbjct: 292 QCI 294
Score = 164 (62.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 67/249 (26%), Positives = 106/249 (42%)
Query: 275 DSEMLASGSQDGKIKVWRIRS---------GQCLRRLERAHSEGVTSLVFSRDGSQILST 325
D + S S+D I VW + S G+ +R L H+ V+ +V S DG LS
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT-GHNHFVSDVVISSDGQFALSG 87
Query: 326 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 385
S+D T R+ L G ++F H+ V F+ D ++V+ S D ++K+W+ + C
Sbjct: 88 SWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLA-QCKY 146
Query: 386 TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY-IMTLQGQVVKSFSSGKREGGD 444
T V++V P N D ++V + + L +K+ G G
Sbjct: 147 TITDDCHTDW----VSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHT--GY 200
Query: 445 FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATY 502
VSP G G+D + GK HL + DVI ++ P+R L A
Sbjct: 201 VNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLPGNDVINAMSFSPNRYWLCAAV 258
Query: 503 GEDCTMKLW 511
G ++K+W
Sbjct: 259 GS--SIKIW 265
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 36/119 (30%), Positives = 60/119 (50%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H+ V + S D + SGS D +++W + G R+ +H++ V S+ FS D QI
Sbjct: 68 HNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFI-SHTKDVLSVAFSADNRQI 126
Query: 323 LSTSFDSTARI-HGLKSGKLLKEFRGHSSYVNDAIFT--NDGSRVVTASSDCTVKVWDL 378
+S S D + ++ + L K H+ +V+ F+ N +V+A D VKVW+L
Sbjct: 127 VSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNL 185
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 193 (73.0 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 68/243 (27%), Positives = 110/243 (45%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
S DGQF +S S+D + + WD G + F+ H + VL + FS D+ + S
Sbjct: 78 SSDGQFALSGSWDKTLRL-WDLNQGVSTRQ--------FISHTKDVLSVAFSADNRQIVS 128
Query: 282 GSQDGKIKVWRIRSGQCLRRL-ERAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKS 338
GS+D IK+W + QC + + H++ V+++ FS I+S +D ++ L +
Sbjct: 129 GSRDKSIKLWNTLA-QCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGN 187
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
+L GH+ YVN + DGS + D +WDL L T L G D
Sbjct: 188 CRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LPGNDV 241
Query: 399 SVNSVHLFPKNPDHIVVCNKT-SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWI 457
+N++ +P+ +C SSI I L+ + K K E +A+ S +G
Sbjct: 242 -INAMSF---SPNRYWLCAAVGSSIKIWDLEDK--KEIEELKPE----IASSGSSRGSSP 291
Query: 458 YCV 460
C+
Sbjct: 292 QCI 294
Score = 164 (62.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 67/249 (26%), Positives = 106/249 (42%)
Query: 275 DSEMLASGSQDGKIKVWRIRS---------GQCLRRLERAHSEGVTSLVFSRDGSQILST 325
D + S S+D I VW + S G+ +R L H+ V+ +V S DG LS
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT-GHNHFVSDVVISSDGQFALSG 87
Query: 326 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 385
S+D T R+ L G ++F H+ V F+ D ++V+ S D ++K+W+ + C
Sbjct: 88 SWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLA-QCKY 146
Query: 386 TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY-IMTLQGQVVKSFSSGKREGGD 444
T V++V P N D ++V + + L +K+ G G
Sbjct: 147 TITDDCHTDW----VSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHT--GY 200
Query: 445 FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATY 502
VSP G G+D + GK HL + DVI ++ P+R L A
Sbjct: 201 VNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLPGNDVINAMSFSPNRYWLCAAV 258
Query: 503 GEDCTMKLW 511
G ++K+W
Sbjct: 259 GS--SIKIW 265
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 36/119 (30%), Positives = 60/119 (50%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H+ V + S D + SGS D +++W + G R+ +H++ V S+ FS D QI
Sbjct: 68 HNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFI-SHTKDVLSVAFSADNRQI 126
Query: 323 LSTSFDSTARI-HGLKSGKLLKEFRGHSSYVNDAIFT--NDGSRVVTASSDCTVKVWDL 378
+S S D + ++ + L K H+ +V+ F+ N +V+A D VKVW+L
Sbjct: 127 VSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNL 185
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 195 (73.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 47/140 (33%), Positives = 73/140 (52%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G ++ C FSP G L S S+D + +WD +G+L + L H + V I
Sbjct: 304 GHHNYVYCLAFSPKGNILASGSYDEAV-FLWDVRAGRLMRSLP--------AHSDPVSGI 354
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+F RD ++ S S DG I++W +GQCLR L + VT++ FS +G IL+ + DS
Sbjct: 355 DFCRDGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSPNGRYILAFNLDSC 414
Query: 331 ARI--HGLKSGKLLKEFRGH 348
R+ + K+ K ++GH
Sbjct: 415 IRLWDYIAHPSKVKKTYQGH 434
Score = 139 (54.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 45/150 (30%), Positives = 70/150 (46%)
Query: 300 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 359
RR H V L FS G+ + S S+D + +++G+L++ HS V+ F
Sbjct: 299 RRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCR 358
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 419
DG+ VV+ S+D +++WD + CL+T + + +V +V F N +I+ N
Sbjct: 359 DGTLVVSCSTDGLIRIWDTATGQCLRTL-----VHEDNPAVTNV-CFSPNGRYILAFNLD 412
Query: 420 SSI----YIM-------TLQGQVVKSFSSG 438
S I YI T QG V FS G
Sbjct: 413 SCIRLWDYIAHPSKVKKTYQGHVNTGFSIG 442
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 59/246 (23%), Positives = 101/246 (41%)
Query: 220 RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 279
R SP+G+++ S S DG + WD +G D T + H V C+ +S DS L
Sbjct: 187 RISPNGRWIASASADGTARI-WDAETGA-------HID-TLVGHMAGVSCLAWSPDSGTL 237
Query: 280 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 339
A+GS D I++W + + + + + G++I S G G
Sbjct: 238 ATGSDDKAIRLWDRITAEPAHAVGTQDGDDDAERGRTHGGTRISGASGIGVGGGGGPARG 297
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP-PPPLRGGDA 398
+ GH +YV F+ G+ + + S D V +WD+++ +++ P+ G D
Sbjct: 298 TR-RPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGID- 355
Query: 399 SVNSVHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVKSFSSGKREGGDFVAACVSPKGEWI 457
F ++ +V C+ I I T GQ +++ + C SP G +I
Sbjct: 356 -------FCRDGTLVVSCSTDGLIRIWDTATGQCLRTLVH--EDNPAVTNVCFSPNGRYI 406
Query: 458 YCVGED 463
D
Sbjct: 407 LAFNLD 412
Score = 116 (45.9 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 300 RRLE-RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
RRLE R HS+ + + S +G I S S D TARI ++G + GH + V+ ++
Sbjct: 172 RRLELRGHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGHMAGVSCLAWS 231
Query: 359 NDGSRVVTASSDCTVKVWD 377
D + T S D +++WD
Sbjct: 232 PDSGTLATGSDDKAIRLWD 250
Score = 57 (25.1 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 13/61 (21%), Positives = 27/61 (44%)
Query: 451 SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKL 510
SPKG + D ++ + ++G+L + H V G+ L+ + D +++
Sbjct: 315 SPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRDGTLVVSCSTDGLIRI 374
Query: 511 W 511
W
Sbjct: 375 W 375
Score = 49 (22.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 364 VVTASSDCTVKVWDLKSTDCLQ 385
V +AS D + +WD+KS + +Q
Sbjct: 489 VASASEDGHIVLWDVKSKEVVQ 510
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 200 (75.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 72/309 (23%), Positives = 129/309 (41%)
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDE 265
HT K C ++P+G+ LV+ S G +W+ L+ + LQ HD
Sbjct: 118 HTSSNKVKYPINCVSWTPEGRRLVTGSSSGEF-TLWNGLTFNFETILQ--------AHDS 168
Query: 266 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG-VTSLVFSRDGSQILS 324
V I +S + + + SG G IK W+ ++ +AH + + L FS ++ S
Sbjct: 169 AVRSIIWSHNEDWMVSGDDSGNIKYWQPNMNNV--KIFKAHEQSKIRGLSFSPTDLKLAS 226
Query: 325 TSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL 384
+ D +I + GH V + S +V+ D +K+WD KS+ +
Sbjct: 227 CADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNI 286
Query: 385 QTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGD 444
T L G ++V+ V + +N + IV + + + ++ +K + K G +
Sbjct: 287 TT------LHGHKSTVSKVE-WNQNGNWIVSASSDQLLKVFDIR--TMKEMQTFKGHGKE 337
Query: 445 FVAACVSPKGEWIYCVGED--RNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATY 502
A + P E ++ G+ + LY + H+ DV ++ HP ++LA+
Sbjct: 338 VTALALHPYHEDLFVSGDKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHPIGHILASG 397
Query: 503 GEDCTMKLW 511
D T K W
Sbjct: 398 SNDHTTKFW 406
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 199 (75.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 49/159 (30%), Positives = 77/159 (48%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
SP F S S+D + W + D Y + H V C++F +S LA+
Sbjct: 390 SPHSLFFASASYDHTARL-WSF-------DRTYPL-RIYAGHLAGVDCVKFHPNSNYLAT 440
Query: 282 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 341
GS D +++W + G +R L H V L FS +G ++S D ++ L SG L
Sbjct: 441 GSTDKTVRLWSAQQGNSVR-LFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTL 499
Query: 342 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
K+ GH+ + F+ D S + +AS D +V++WD+KS
Sbjct: 500 YKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKS 538
Score = 164 (62.8 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 54/189 (28%), Positives = 79/189 (41%)
Query: 192 MKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKD 251
++ D ED T + G RF PD L+SCS D I WD S
Sbjct: 320 LEVDEEDR--TATERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRY-WDLES--FTNT 374
Query: 252 LQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVT 311
+ YQ H V ++ S S AS S D ++W LR + H GV
Sbjct: 375 VLYQG------HAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLR-IYAGHLAGVD 427
Query: 312 SLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDC 371
+ F + + + + S D T R+ + G ++ F GH V F+ +G +V+A D
Sbjct: 428 CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQ 487
Query: 372 TVKVWDLKS 380
+K+WDL S
Sbjct: 488 LLKLWDLAS 496
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE 277
C FSP+GQ+LVS D +++ WD SG L KDL D+ + + FS DS
Sbjct: 470 CLAFSPNGQYLVSAGEDQLLKL-WDLASGTLYKDLHGHTDD--------ITSVTFSLDSS 520
Query: 278 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI 333
++AS S D +++W I+S + + SE + V++ S +L+ F + +R+
Sbjct: 521 VIASASMDNSVRIWDIKSKHNSTPADGSSSELLG--VYTGQMSTVLNVQFMAGSRL 574
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 53/213 (24%), Positives = 94/213 (44%)
Query: 300 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 359
R++ H V S F D S +LS S D++ R L+S ++GH+ V D +
Sbjct: 332 RKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISP 391
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 419
+AS D T ++W T L+ + G A V+ V P N +++ +
Sbjct: 392 HSLFFASASYDHTARLWSFDRTYPLRIYA------GHLAGVDCVKFHP-NSNYLATGSTD 444
Query: 420 SSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 478
++ + + Q G V+ F+ G SP G+++ GED+ L + SG L
Sbjct: 445 KTVRLWSAQQGNSVRLFTG---HCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYK 501
Query: 479 LMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ H D+ VT +++A+ D ++++W
Sbjct: 502 DLHGHTDDITSVTFSLDSSVIASASMDNSVRIW 534
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 212 (79.7 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 77/302 (25%), Positives = 141/302 (46%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQY----QADETFMMHDET----VLCIEF 272
F PD + ++S +DG + ++WD +G ++ + + + T++ E + F
Sbjct: 679 FLPDSKLIISGYYDGSV-MLWDTTTGDRQEIADHFGISKVNYTYLQPPEQGGYGLHAGAF 737
Query: 273 SRDSEMLAS-G-SQDGK-IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
S D + +A+ G S+D I ++ +G L+++ + HS +++ FS D Q+++ S D
Sbjct: 738 SADCKQIAAFGWSRDSTCIMLFDTATGD-LQKILKGHSHECSTMAFSSDSRQLVTGSVDC 796
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
T R+ +G L K F GH+ V ++DG ++V+ S + VK+WD + D L+T
Sbjct: 797 TVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIEA-VKLWDAATGDLLKT--- 852
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 449
L G A SV P + I K I+I G + K+ +R G ++
Sbjct: 853 ---LASGFAG--SVAFSPDSRQ-IAAGFKDGKIFIWDAAGTLQKTL---ERHPGAIMSIA 903
Query: 450 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 509
SP + + D + + G ++ + H K V + P ++A+ D T+K
Sbjct: 904 FSPDVKQLVTCSTDSTIKRWDITIGGVQEAVG-HSKHVTTMVLSPDGKVIASGSADKTIK 962
Query: 510 LW 511
LW
Sbjct: 963 LW 964
Score = 198 (74.8 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 55/168 (32%), Positives = 83/168 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSPD + + + DG I +WD +G L+K L+ H ++ I FS D + L
Sbjct: 863 FSPDSRQIAAGFKDGKI-FIWD-AAGTLQKTLE--------RHPGAIMSIAFSPDVKQLV 912
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+ S D IK W I G + HS+ VT++V S DG I S S D T ++ +G
Sbjct: 913 TCSTDSTIKRWDITIGGVQEAV--GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGD 970
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
L K GH V +F+ D ++V+ SS+ VK+WD + +F+
Sbjct: 971 LQKTLTGHLDTVEKVVFSLDNRQIVSCSSEA-VKIWDAATGKVQNSFE 1017
Score = 175 (66.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 49/166 (29%), Positives = 84/166 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSPD + LV+CS D I+ WD G +++ + H + V + S D +++A
Sbjct: 904 FSPDVKQLVTCSTDSTIKR-WDITIGGVQEAVG---------HSKHVTTMVLSPDGKVIA 953
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
SGS D IK+W +G L++ H + V +VFS D QI+S S ++ +I +GK
Sbjct: 954 SGSADKTIKLWDAATGD-LQKTLTGHLDTVEKVVFSLDNRQIVSCSSEAV-KIWDAATGK 1011
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 386
+ F + A+ + DG + + + +K+WD+ + L+T
Sbjct: 1012 VQNSFESDDVFTIVAV-SPDGKHIASGHCNGRIKLWDMATGSLLKT 1056
Score = 133 (51.9 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 43/149 (28%), Positives = 69/149 (46%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G H SPDG+ + S S D I++ WD +G L+K T H +TV +
Sbjct: 935 GHSKHVTTMVLSPDGKVIASGSADKTIKL-WDAATGDLQK--------TLTGHLDTVEKV 985
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV-FSRDGSQILSTSFDS 329
FS D+ + S S + +K+W +G+ E S+ V ++V S DG I S +
Sbjct: 986 VFSLDNRQIVSCSSEA-VKIWDAATGKVQNSFE---SDDVFTIVAVSPDGKHIASGHCNG 1041
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFT 358
++ + +G LLK G+ S + + T
Sbjct: 1042 RIKLWDMATGSLLKTMAGYRSKFDSLVTT 1070
Score = 119 (46.9 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 30/97 (30%), Positives = 50/97 (51%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQ-YQADETFMMHDETVLCIEFSRDSEML 279
FSPDG+ + S S G I++ WD +G L+K L + + E V + F DS+++
Sbjct: 628 FSPDGKQIASGSDSGLIKL-WDTTTGSLQKTLSGSHPKRRYQIQQEQVKAMAFLPDSKLI 686
Query: 280 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 316
SG DG + +W +G R E A G++ + ++
Sbjct: 687 ISGYYDGSVMLWDTTTGD---RQEIADHFGISKVNYT 720
Score = 106 (42.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 29/87 (33%), Positives = 43/87 (49%)
Query: 310 VTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHS-SYVNDAI------------ 356
+T LVFS D ILSTS D ++ +G L K HS S + DA
Sbjct: 1086 ITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNWIFS 1145
Query: 357 --FTNDGSRVVTASSDCTVKVWDLKST 381
F++DG + AS+D T++VW ++ +
Sbjct: 1146 VAFSSDGQHIAAASADKTIRVWSIEKS 1172
Score = 40 (19.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 482 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ + G+ P L+ + D +KLW
Sbjct: 1081 IFNTQITGLVFSPDAKLILSTSTDRAIKLW 1110
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 54/164 (32%), Positives = 80/164 (48%)
Query: 220 RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 279
RF+P G + VSCS+D + W S QA F+ H V C++F +S +
Sbjct: 499 RFAPHGYYFVSCSYDKTARL-WATDSN--------QALRVFVGHLSDVDCVQFHPNSNYV 549
Query: 280 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 339
A+GS D +++W +GQ +R L H V+SL FS G + S S D I L +G
Sbjct: 550 ATGSSDRTVRLWDNMTGQSVR-LMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNG 608
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL-KSTD 382
L+ H+S V F+ DG+ + A D + +WD K T+
Sbjct: 609 SLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTE 652
Score = 160 (61.4 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 247 KLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAH 306
++ D + + M H V F+ + +L S S+D I++W + + C+ R H
Sbjct: 433 RMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTY-RGH 491
Query: 307 SEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 366
V + F+ G +S S+D TAR+ S + L+ F GH S V+ F + + V T
Sbjct: 492 VYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVAT 551
Query: 367 ASSDCTVKVWD 377
SSD TV++WD
Sbjct: 552 GSSDRTVRLWD 562
Score = 159 (61.0 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 58/230 (25%), Positives = 97/230 (42%)
Query: 283 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 342
S D +++ RSG+ R L H+ V F+ + + +LS S DST R+ L + +
Sbjct: 427 SADINVRMLDDRSGEVTRSL-MGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCV 485
Query: 343 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNS 402
+RGH V D F G V+ S D T ++W S L+ F G + V+
Sbjct: 486 VTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFV------GHLSDVDC 539
Query: 403 VHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG 461
V P N +++ + ++ + + GQ V+ + K G + S G ++
Sbjct: 540 VQFHP-NSNYVATGSSDRTVRLWDNMTGQSVRLMTGHK---GSVSSLAFSACGRYLASGS 595
Query: 462 EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
D N+ + +G L + H V +T +LA G D + LW
Sbjct: 596 VDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLW 645
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/119 (29%), Positives = 59/119 (49%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G S +C +F P+ ++ + S D + + WD ++G Q+ H +V +
Sbjct: 532 GHLSDVDCVQFHPNSNYVATGSSDRTVRL-WDNMTG--------QSVRLMTGHKGSVSSL 582
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
FS LASGS D I +W + +G + L R H+ VT++ FSRDG+ + + D+
Sbjct: 583 AFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLR-HTSTVTTITFSRDGTVLAAAGLDN 640
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 43/169 (25%), Positives = 72/169 (42%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE 277
CA F+P+ L+SCS D I + W L+ + T+ H V + F+
Sbjct: 456 CA-FAPEMNLLLSCSEDSTIRL-WSLLT--------WSCVVTYRGHVYPVWDVRFAPHGY 505
Query: 278 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 337
S S D ++W S Q LR H V + F + + + + S D T R+
Sbjct: 506 YFVSCSYDKTARLWATDSNQALRVFV-GHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNM 564
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 386
+G+ ++ GH V+ F+ G + + S D + +WDL + + T
Sbjct: 565 TGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTT 613
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 248 LKKD-LQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAH 306
L KD L T + + V C E S DS MLA G D +++W + + LR L+ A
Sbjct: 360 LSKDQLPSAVFYTVLNSHQGVTCAEISDDSTMLACGFGDSSVRIWSLTPAK-LRTLKDAD 418
Query: 307 SEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 366
S ++ S D R+ +SG++ + GH+ V F + + +++
Sbjct: 419 SL-----------RELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLS 467
Query: 367 ASSDCTVKVWDLKSTDCLQTFK 388
S D T+++W L + C+ T++
Sbjct: 468 CSEDSTIRLWSLLTWSCVVTYR 489
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 199 (75.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 70/282 (24%), Positives = 119/282 (42%)
Query: 243 YLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL 302
YL KK+++ + H + V FS D + +AS D ++V++ +G+ L +
Sbjct: 595 YLEWINKKNIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEI 654
Query: 303 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS 362
+AH + V FS D I + S D +I +G L+ + HS VN FTN+
Sbjct: 655 -KAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSH 713
Query: 363 RVV--TASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 420
++ TASSDC +K+WDL +C T + G SVN P + + C+
Sbjct: 714 YLLLATASSDCFLKLWDLNQKECRNT------MFGHTNSVNHCRFSPDDK-LLASCSADG 766
Query: 421 SIYIMTLQGQV------VKSF---SSGKREGGDFVAACVSPKGEWIYCVGEDRN-LYCFS 470
++ + ++ VK F S +E + + C S + + +N ++ F
Sbjct: 767 TLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFD 826
Query: 471 -HQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H G L + H + P +L C ++LW
Sbjct: 827 IHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVALSQCCVELW 868
Score = 190 (71.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 60/213 (28%), Positives = 102/213 (47%)
Query: 177 LPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGF 236
L P Q+ F G + +E + I G K +F+ DG+ L+S S D
Sbjct: 970 LSPHLQYIAFGGEDGAVEILELLNNRIFQSRI--GHKKTVRHIQFTDDGKTLISSSDDSS 1027
Query: 237 IEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG 296
I+V W++ S ++ + QA H ETV + ++S++L S S DG +K+W I +G
Sbjct: 1028 IQV-WNWQS---EEYVFLQA------HQETVKDFKLLKNSKLL-SWSFDGTVKIWSIITG 1076
Query: 297 QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAI 356
+ + H + V S S D ++ STS D TA+I + L E RGH V ++
Sbjct: 1077 RIEKDFV-CHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSV 1135
Query: 357 FTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
F+ D + + T + +++W++ + + L P
Sbjct: 1136 FSVDSTLLATGDDNGEIRIWNVSNGELLHLCAP 1168
Score = 188 (71.2 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 278
A FS DGQ + SC D ++V KL L+ +A H++ VLC FS D
Sbjct: 622 ACFSEDGQRIASCGVDKTLQVFKAETGEKL---LEIKA------HEDEVLCCAFSTDDRF 672
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL--STSFDSTARIHGL 336
+A+ S D K+K+W +G + + HSE V F+ + +L + S D ++ L
Sbjct: 673 IATCSVDKKVKIWNSMTGGLVHVYDE-HSEQVNCCHFTNNSHYLLLATASSDCFLKLWDL 731
Query: 337 KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
+ GH++ VN F+ D + + S+D T+K+WD+KS +
Sbjct: 732 NQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSAN 777
Score = 178 (67.7 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 70/309 (22%), Positives = 132/309 (42%)
Query: 210 FG-TKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDL---QYQADETFMMHDE 265
FG T S C RFSPD + L SCS DG +++ WD S +K + Q+ + D
Sbjct: 741 FGHTNSVNHC-RFSPDDKLLASCSADGTLKL-WDVKSANERKSINVKQFFLNSEEPQEDM 798
Query: 266 TVL--CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
V+ C +S D + +++ KI ++ I +G L + H + FS +
Sbjct: 799 EVIVKCCSWSADGTRIMVAAKN-KIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAV 857
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
+ + S + + RGH S+V+ +F+ DGS +T+S D T+++W+ K C
Sbjct: 858 VALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKV-C 916
Query: 384 LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREG 442
K + + V +F +N ++ + + ++ + GQ+ +
Sbjct: 917 ----KNSAIVLKQEIDV----VFQENEVMVLAVDNIKRLQLINGKTGQIDYLIEA----- 963
Query: 443 GDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATY 502
C+SP ++I GED + + ++ H+K V + L +
Sbjct: 964 -QVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISS 1022
Query: 503 GEDCTMKLW 511
+D ++++W
Sbjct: 1023 SDDSSIQVW 1031
Score = 173 (66.0 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 61/255 (23%), Positives = 115/255 (45%)
Query: 208 IKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
I + ++ C SP Q++ DG +E++ + L+ ++ +Q+ + H +TV
Sbjct: 957 IDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEIL-ELLNNRI-----FQSR---IGHKKTV 1007
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
I+F+ D + L S S D I+VW +S + + +AH E V ++ S++LS SF
Sbjct: 1008 RHIQFTDDGKTLISSSDDSSIQVWNWQSEEYV--FLQAHQETVKDFKLLKN-SKLLSWSF 1064
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
D T +I + +G++ K+F H V + D ++ + S+D T K+W + L
Sbjct: 1065 DGTVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHEL 1124
Query: 388 KPPPP-LRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFV 446
+ +R SV+S L + + + S+ ++ L ++ GG
Sbjct: 1125 RGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPILVE-EGAATHGGWVT 1183
Query: 447 AACVSPKGEWIYCVG 461
C SP + + G
Sbjct: 1184 DLCFSPDSKMLVSAG 1198
Score = 149 (57.5 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 213 KSHAE---CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLC 269
K+H + C FS D +F+ +CS D +++ W+ ++G L + DE H E V C
Sbjct: 655 KAHEDEVLCCAFSTDDRFIATCSVDKKVKI-WNSMTG----GLVHVYDE----HSEQVNC 705
Query: 270 IEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
F+ +S +LA+ S D +K+W + +C R H+ V FS D + S S
Sbjct: 706 CHFTNNSHYLLLATASSDCFLKLWDLNQKEC-RNTMFGHTNSVNHCRFSPDDKLLASCSA 764
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVN 353
D T ++ +KS K ++N
Sbjct: 765 DGTLKLWDVKSANERKSINVKQFFLN 790
Score = 53 (23.7 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 19 KENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAILPQVAQLKLPRNKLEDLYE 78
K+ L + ++ EC+ S V I + D + RWD L Q+ + R + Y+
Sbjct: 303 KKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPN-RWDYYLRQLQNKQFKRIRKSSFYD 361
Query: 79 QIVLE 83
L+
Sbjct: 362 YEALD 366
Score = 47 (21.6 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 21/109 (19%), Positives = 41/109 (37%)
Query: 404 HL-FPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGE 462
H+ F + ++ + SSI + Q + + + DF S W +
Sbjct: 1009 HIQFTDDGKTLISSSDDSSIQVWNWQSEEYVFLQAHQETVKDFKLLKNSKLLSWSF---- 1064
Query: 463 DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
D + +S +G++E H+ V+ P ++ D T K+W
Sbjct: 1065 DGTVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1113
Score = 41 (19.5 bits), Expect = 2.9e-10, Sum P(4) = 2.9e-10
Identities = 7/14 (50%), Positives = 13/14 (92%)
Query: 70 RNKLEDLYEQIVLE 83
RN+L+DL+++IV +
Sbjct: 451 RNQLQDLHKKIVTQ 464
Score = 38 (18.4 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 37/186 (19%), Positives = 68/186 (36%)
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
P + QL L + ++Y+Q L+ + E+D L + L L
Sbjct: 562 PNIVQLGLCEPETSEVYQQAKLQAKQ--EVDHGMLYLEWINKKNIKN---------LSRL 610
Query: 121 LVRTYFDAHEAYQDSTKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPPG 180
+VR + DA Y E + V L+ +K + + L
Sbjct: 611 VVRPHTDA--VYHACFSEDGQRIASCGVDKTLQVFKAETGEKLL--EIKAHEDEVLCCAF 666
Query: 181 TQFDLFRGTAAMKQDVEDMYPTT--LSHTIKFGTKSHAECARFSPDGQFLV--SCSFDGF 236
+ D F T ++ + V+ T L H ++ C F+ + +L+ + S D F
Sbjct: 667 STDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQ-VNCCHFTNNSHYLLLATASSDCF 725
Query: 237 IEVVWD 242
+++ WD
Sbjct: 726 LKL-WD 730
Score = 37 (18.1 bits), Expect = 2.9e-10, Sum P(4) = 2.9e-10
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 28 QTLQNECQVSLNTVDSIET 46
+ N+CQ+ L T D T
Sbjct: 253 KAFDNQCQILLTTRDKSVT 271
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 199 (75.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 70/282 (24%), Positives = 119/282 (42%)
Query: 243 YLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL 302
YL KK+++ + H + V FS D + +AS D ++V++ +G+ L +
Sbjct: 602 YLEWINKKNIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEI 661
Query: 303 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS 362
+AH + V FS D I + S D +I +G L+ + HS VN FTN+
Sbjct: 662 -KAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSH 720
Query: 363 RVV--TASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 420
++ TASSDC +K+WDL +C T + G SVN P + + C+
Sbjct: 721 YLLLATASSDCFLKLWDLNQKECRNT------MFGHTNSVNHCRFSPDDK-LLASCSADG 773
Query: 421 SIYIMTLQGQV------VKSF---SSGKREGGDFVAACVSPKGEWIYCVGEDRN-LYCFS 470
++ + ++ VK F S +E + + C S + + +N ++ F
Sbjct: 774 TLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFD 833
Query: 471 -HQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H G L + H + P +L C ++LW
Sbjct: 834 IHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVALSQCCVELW 875
Score = 188 (71.2 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 278
A FS DGQ + SC D ++V KL L+ +A H++ VLC FS D
Sbjct: 629 ACFSEDGQRIASCGVDKTLQVFKAETGEKL---LEIKA------HEDEVLCCAFSTDDRF 679
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL--STSFDSTARIHGL 336
+A+ S D K+K+W +G + + HSE V F+ + +L + S D ++ L
Sbjct: 680 IATCSVDKKVKIWNSMTGGLVHVYDE-HSEQVNCCHFTNNSHYLLLATASSDCFLKLWDL 738
Query: 337 KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
+ GH++ VN F+ D + + S+D T+K+WD+KS +
Sbjct: 739 NQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSAN 784
Score = 181 (68.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 60/214 (28%), Positives = 102/214 (47%)
Query: 177 LPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGF 236
L P Q+ F G + +E + I G K +F+ DG+ L+S S D
Sbjct: 977 LSPHLQYIAFGGEDGAVEILELLNNRIFQSRI--GHKKTVRHIQFTDDGKTLISSSDDSS 1034
Query: 237 IEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIK-VWRIRS 295
I+V W++ S ++ + QA H ETV + ++S++L S S DG +K +W I +
Sbjct: 1035 IQV-WNWQS---EEYVFLQA------HQETVKDFKLLKNSKLL-SWSFDGTVKKIWSIIT 1083
Query: 296 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 355
G+ + H + V S S D ++ STS D TA+I + L E RGH V +
Sbjct: 1084 GRIEKDFV-CHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCS 1142
Query: 356 IFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
+F+ D + + T + +++W++ + + L P
Sbjct: 1143 VFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAP 1176
Score = 178 (67.7 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 70/309 (22%), Positives = 132/309 (42%)
Query: 210 FG-TKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDL---QYQADETFMMHDE 265
FG T S C RFSPD + L SCS DG +++ WD S +K + Q+ + D
Sbjct: 748 FGHTNSVNHC-RFSPDDKLLASCSADGTLKL-WDVKSANERKSINVKQFFLNSEEPQEDM 805
Query: 266 TVL--CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
V+ C +S D + +++ KI ++ I +G L + H + FS +
Sbjct: 806 EVIVKCCSWSADGTRIMVAAKN-KIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAV 864
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
+ + S + + RGH S+V+ +F+ DGS +T+S D T+++W+ K C
Sbjct: 865 VALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKV-C 923
Query: 384 LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREG 442
K + + V +F +N ++ + + ++ + GQ+ +
Sbjct: 924 ----KNSAIVLKQEIDV----VFQENEVMVLAVDNIKRLQLINGKTGQIDYLIEA----- 970
Query: 443 GDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATY 502
C+SP ++I GED + + ++ H+K V + L +
Sbjct: 971 -QVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISS 1029
Query: 503 GEDCTMKLW 511
+D ++++W
Sbjct: 1030 SDDSSIQVW 1038
Score = 164 (62.8 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 61/256 (23%), Positives = 115/256 (44%)
Query: 208 IKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
I + ++ C SP Q++ DG +E++ + L+ ++ +Q+ + H +TV
Sbjct: 964 IDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEIL-ELLNNRI-----FQSR---IGHKKTV 1014
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
I+F+ D + L S S D I+VW +S + + +AH E V ++ S++LS SF
Sbjct: 1015 RHIQFTDDGKTLISSSDDSSIQVWNWQSEEYV--FLQAHQETVKDFKLLKN-SKLLSWSF 1071
Query: 328 DSTAR-IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 386
D T + I + +G++ K+F H V + D ++ + S+D T K+W + L
Sbjct: 1072 DGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHE 1131
Query: 387 FKPPPP-LRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDF 445
+ +R SV+S L + + + S+ ++ L ++ GG
Sbjct: 1132 LRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPILVE-EGAATHGGWV 1190
Query: 446 VAACVSPKGEWIYCVG 461
C SP + + G
Sbjct: 1191 TDLCFSPDSKMLVSAG 1206
Score = 149 (57.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 213 KSHAE---CARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLC 269
K+H + C FS D +F+ +CS D +++ W+ ++G L + DE H E V C
Sbjct: 662 KAHEDEVLCCAFSTDDRFIATCSVDKKVKI-WNSMTG----GLVHVYDE----HSEQVNC 712
Query: 270 IEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
F+ +S +LA+ S D +K+W + +C R H+ V FS D + S S
Sbjct: 713 CHFTNNSHYLLLATASSDCFLKLWDLNQKEC-RNTMFGHTNSVNHCRFSPDDKLLASCSA 771
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVN 353
D T ++ +KS K ++N
Sbjct: 772 DGTLKLWDVKSANERKSINVKQFFLN 797
Score = 53 (23.7 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 19 KENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAILPQVAQLKLPRNKLEDLYE 78
K+ L + ++ EC+ S V I + D + RWD L Q+ + R + Y+
Sbjct: 306 KKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPN-RWDYYLRQLQNKQFKRIRKSSFYD 364
Query: 79 QIVLE 83
L+
Sbjct: 365 YEALD 369
Score = 38 (18.4 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 37/186 (19%), Positives = 68/186 (36%)
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
P + QL L + ++Y+Q L+ + E+D L + L L
Sbjct: 569 PNIVQLGLCEPETSEVYQQAKLQAKQ--EVDHGMLYLEWINKKNIKN---------LSRL 617
Query: 121 LVRTYFDAHEAYQDSTKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPPG 180
+VR + DA Y E + V L+ +K + + L
Sbjct: 618 VVRPHTDA--VYHACFSEDGQRIASCGVDKTLQVFKAETGEKLL--EIKAHEDEVLCCAF 673
Query: 181 TQFDLFRGTAAMKQDVEDMYPTT--LSHTIKFGTKSHAECARFSPDGQFLV--SCSFDGF 236
+ D F T ++ + V+ T L H ++ C F+ + +L+ + S D F
Sbjct: 674 STDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQ-VNCCHFTNNSHYLLLATASSDCF 732
Query: 237 IEVVWD 242
+++ WD
Sbjct: 733 LKL-WD 737
Score = 37 (18.1 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 28 QTLQNECQVSLNTVDSIET 46
+ N+CQ+ L T D T
Sbjct: 256 KAFDNQCQILLTTRDKSVT 274
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 200 (75.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 63/239 (26%), Positives = 112/239 (46%)
Query: 228 LVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGK 287
+VS S D + V WD +G Q M H V C+++ D + SG+ D
Sbjct: 527 VVSGSRDATLRV-WDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFM 575
Query: 288 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG 347
+KVW + CL L+ H+ V SL F DG ++S S D++ R+ +++G + G
Sbjct: 576 VKVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG 632
Query: 348 HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFP 407
H S + + D +V+ ++D TVK+WD+K+ CLQT + P ++V + F
Sbjct: 633 HQS-LTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQTLQGP---HKHQSAVTCLQ-FN 686
Query: 408 KNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN 465
KN ++ + ++ + L+ G+ +++ + + G V + + C RN
Sbjct: 687 KN--FVITSSDDGTVKLWDLRTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 743
Score = 184 (69.8 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 70/256 (27%), Positives = 120/256 (46%)
Query: 263 HDETVL-CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 321
HD+ V+ C++F + SGS D +KVW +G+CLR L H+ GV S RD
Sbjct: 432 HDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQM-RDNI- 486
Query: 322 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 381
I+S S D T ++ ++G+ + GH+S V + ++ RVV+ S D T++VWD+++
Sbjct: 487 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE-KRVVSGSRDATLRVWDIETG 544
Query: 382 DCLQTFKPPPPLRGGDASVNSVHLFPKNP-----DHIV-VCNKTSSIYIMTLQGQVVKSF 435
CL L G A+V V + D +V V + + + TLQG + +
Sbjct: 545 QCLHV------LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 598
Query: 436 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 495
S + +G V+ + D ++ + ++G H + H+ G+
Sbjct: 599 SL-QFDGIHVVSGSL------------DTSIRVWDVETGNCIHTLTGHQSLTSGMELKD- 644
Query: 496 RNLLATYGEDCTMKLW 511
N+L + D T+K+W
Sbjct: 645 -NILVSGNADSTVKIW 659
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 44/150 (29%), Positives = 75/150 (50%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
V D T HT++ G + +F DG +VS S D I V WD +G
Sbjct: 578 VWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRV-WDVETGN-------- 625
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSL 313
T H +E +D+ +L SG+ D +K+W I++GQCL+ L+ H VT L
Sbjct: 626 CIHTLTGHQSLTSGMEL-KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCL 683
Query: 314 VFSRDGSQILSTSFDSTARIHGLKSGKLLK 343
F+++ ++++S D T ++ L++G+ ++
Sbjct: 684 QFNKNF--VITSSDDGTVKLWDLRTGEFIR 711
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 47/193 (24%), Positives = 90/193 (46%)
Query: 321 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
+++S S D+T R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++
Sbjct: 526 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 583
Query: 381 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 439
CL T L+G N V+ + H+V + +SI + ++ G + + +
Sbjct: 584 ETCLHT------LQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--- 631
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK-LEHLMKVHEKDVIGVTHHPHRNL 498
G + + + K + D + + ++G+ L+ L H+ ++N
Sbjct: 632 --GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNF 689
Query: 499 LATYGEDCTMKLW 511
+ T +D T+KLW
Sbjct: 690 VITSSDDGTVKLW 702
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 198 (74.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 82/325 (25%), Positives = 131/325 (40%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
E Y P H TK + F G L+SCS D I++ W+ + +
Sbjct: 272 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKL-WEVYGDR-------R 323
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
TF+ H + V I F+ S + D +K+W +GQC+ R
Sbjct: 324 CLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNP 383
Query: 316 SRDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++
Sbjct: 384 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLR 443
Query: 375 VWDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 432
VW+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 444 VWEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF- 494
Query: 433 KSFSSGKREGGDFVA--AC-VSPKGEWIYCVGEDRN--LYCFSHQSGKLEHLMKVHEKDV 487
+ K G VA AC V + Y + D N L + ++ KL K H+K
Sbjct: 495 -RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVC 553
Query: 488 IGVTHHPHR-NLLATYGEDCTMKLW 511
IG HPH + + T G D +KLW
Sbjct: 554 IGAVWHPHETSKVITCGWDGLIKLW 578
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 198 (74.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 82/325 (25%), Positives = 131/325 (40%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
E Y P H TK + F G L+SCS D I++ W+ + +
Sbjct: 272 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKL-WEVYGDR-------R 323
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
TF+ H + V I F+ S + D +K+W +GQC+ R
Sbjct: 324 CLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNP 383
Query: 316 SRDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++
Sbjct: 384 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLR 443
Query: 375 VWDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 432
VW+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 444 VWEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF- 494
Query: 433 KSFSSGKREGGDFVA--AC-VSPKGEWIYCVGEDRN--LYCFSHQSGKLEHLMKVHEKDV 487
+ K G VA AC V + Y + D N L + ++ KL K H+K
Sbjct: 495 -RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVC 553
Query: 488 IGVTHHPHR-NLLATYGEDCTMKLW 511
IG HPH + + T G D +KLW
Sbjct: 554 IGAVWHPHETSKVITCGWDGLIKLW 578
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 198 (74.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 82/325 (25%), Positives = 131/325 (40%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
E Y P H TK + F G L+SCS D I++ W+ + +
Sbjct: 272 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKL-WEVYGDR-------R 323
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
TF+ H + V I F+ S + D +K+W +GQC+ R
Sbjct: 324 CLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNP 383
Query: 316 SRDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++
Sbjct: 384 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLR 443
Query: 375 VWDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 432
VW+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 444 VWEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF- 494
Query: 433 KSFSSGKREGGDFVA--AC-VSPKGEWIYCVGEDRN--LYCFSHQSGKLEHLMKVHEKDV 487
+ K G VA AC V + Y + D N L + ++ KL K H+K
Sbjct: 495 -RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVC 553
Query: 488 IGVTHHPHR-NLLATYGEDCTMKLW 511
IG HPH + + T G D +KLW
Sbjct: 554 IGAVWHPHETSKVITCGWDGLIKLW 578
>FB|FBgn0033454 [details] [associations]
symbol:CG1671 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 HSSP:P16649 GO:GO:0032040 KO:K14555
GeneTree:ENSGT00690000102183 OMA:ADSKLIR EMBL:BT004480
RefSeq:NP_610526.1 UniGene:Dm.18811 SMR:Q7JQT9 IntAct:Q7JQT9
STRING:Q7JQT9 EnsemblMetazoa:FBtr0088373 GeneID:36019
KEGG:dme:Dmel_CG1671 UCSC:CG1671-RA FlyBase:FBgn0033454
HOGENOM:HOG000244907 InParanoid:Q7JQT9 OrthoDB:EOG4KPRRV
GenomeRNAi:36019 NextBio:796373 Uniprot:Q7JQT9
Length = 787
Score = 200 (75.5 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 49/171 (28%), Positives = 91/171 (53%)
Query: 218 CARFSPDGQF-LVSCSFDGFIEVVWDYLSGKLKKD-LQYQADETFMMHDETVLCIEFSRD 275
C + +G S S DG ++V W + K ++ + + HD+ V C+ ++ +
Sbjct: 431 CVAMTHNGATGFASVSQDGSMKV-WQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAYAPN 489
Query: 276 SEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHG 335
++++A+ SQD KVW S L+ + R H+ GV S+ FS +L++S D T RI
Sbjct: 490 NKLIATASQDKTAKVWLAESNT-LQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIWS 548
Query: 336 LKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 386
+ + +K F + + A F + G +++A+SD +K+W++K+ CLQ+
Sbjct: 549 ISNFSCIKRFDQECTILR-AEFLDHGKFIISAASDGLLKLWNIKTNTCLQS 598
Score = 162 (62.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 43/148 (29%), Positives = 74/148 (50%)
Query: 250 KDLQYQA-DETFMMHDETVLCIEFSRDSEM-LASGSQDGKIKVWR-IRSGQC-------L 299
KD +A + H T+ C+ + + AS SQDG +KVW+ +RS + L
Sbjct: 411 KDCSLEALTQQANCHTSTIGCVAMTHNGATGFASVSQDGSMKVWQLVRSKEDRNSYSFNL 470
Query: 300 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 359
R +H + V + ++ + I + S D TA++ +S L RGH+ V F+
Sbjct: 471 RYAALSHDKEVNCVAYAPNNKLIATASQDKTAKVWLAESNTLQGVLRGHTRGVWSVRFSP 530
Query: 360 DGSRVVTASSDCTVKVWDLKSTDCLQTF 387
V+T+SSDCT+++W + + C++ F
Sbjct: 531 VDQIVLTSSSDCTLRIWSISNFSCIKRF 558
Score = 120 (47.3 bits), Expect = 0.00090, P = 0.00090
Identities = 58/301 (19%), Positives = 130/301 (43%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
++ +GQ ++ S G ++ V D S K++ D+ Q+D F + + C E + LA
Sbjct: 261 YADEGQLIIVASGSGKLQQV-DPKSWKIR-DILSQSD--FQI-SRLLHCSELKQ----LA 311
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA-RIHGLKSG 339
+ + I V+ + + + ++ L +++ + + F + + L+ + +S +++ +
Sbjct: 312 LVTTEQNILVYDVETLEPIKHLV-GYNDEILDMCFMGEHDRYLAVATNSKHFKLYDTEHD 370
Query: 340 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK-STDC-LQTFKPPPPLRGGD 397
K GHS V + + +++ DC+V++W L+ DC L+
Sbjct: 371 MNCKLIVGHSDTVMSLAASQN--LLISVGKDCSVRLWRLQHDKDCSLEALTQQANCH--T 426
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTL--QGQVVKSFSSGKREGG---DFVAACVS- 451
+++ V + ++ S+ + L + S+S R D CV+
Sbjct: 427 STIGCVAMTHNGATGFASVSQDGSMKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAY 486
Query: 452 -PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKL 510
P + I +D+ + +S L+ +++ H + V V P ++ T DCT+++
Sbjct: 487 APNNKLIATASQDKTAKVWLAESNTLQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRI 546
Query: 511 W 511
W
Sbjct: 547 W 547
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 198 (74.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H V C++F D L SGS D I++W R+ +C+ L H++ V L F D + +
Sbjct: 312 HSSGVTCLQF--DQCKLISGSMDKTIRIWNYRTSECISILH-GHTDSVLCLTF--DSTLL 366
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
+S S D T ++ GK + RGH+ VN D V++ S D T+K+W L++
Sbjct: 367 VSGSADCTVKLWHFSGGKRIT-LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNT 425
Query: 383 CLQTF 387
CL TF
Sbjct: 426 CLHTF 430
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 73/253 (28%), Positives = 108/253 (42%)
Query: 200 YPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADET 259
Y T+ +I G C F D LVS S D +++ W + GK T
Sbjct: 340 YRTSECISILHGHTDSVLCLTF--DSTLLVSGSADCTVKL-WHFSGGKRI---------T 387
Query: 260 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 319
H V + RD ++ SGS D IK+W + + CL AH V SL + D
Sbjct: 388 LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFS-AHIGPVQSLALA-D- 444
Query: 320 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
S++ S S D T + ++ K + GH V + D R+++ + D VKVW+
Sbjct: 445 SRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWE--IAADHLRLISGAHDGVVKVWE-- 500
Query: 380 STDCLQTFK----PPPPLRGGDASVNS--------VHLFPKNPDHIVVCNKTSSIYIMTL 427
+ +C+ T K P + GD V S + LF P+ V T S+ I +L
Sbjct: 501 ACECVHTLKNHSEPVTSVALGDCEVVSGSEDGKIYLWLFNNAPNESPV--STQSVPISSL 558
Query: 428 QGQVVKSFSSGKR 440
GQ +S SS +R
Sbjct: 559 NGQ--RSNSSVQR 569
Score = 118 (46.6 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 27/91 (29%), Positives = 52/91 (57%)
Query: 294 RSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVN 353
R G+C + + HS+GV L R+ + S S+D+T R+ L + + + GHSS V
Sbjct: 260 RHGRCRQVVLSGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSGVT 317
Query: 354 DAIFTNDGSRVVTASSDCTVKVWDLKSTDCL 384
F D ++++ S D T+++W+ ++++C+
Sbjct: 318 CLQF--DQCKLISGSMDKTIRIWNYRTSECI 346
Score = 45 (20.9 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 471 HQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
H SG ++ H V V R L+ + +D T+K+W
Sbjct: 379 HFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIW 419
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 193 (73.0 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 43/128 (33%), Positives = 67/128 (52%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ 321
H+ V C +F + LAS D I +W + G C + HS V L ++ DGS
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWSVY-GDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 322 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKS 380
+ S S D T + ++G+ +K +GH+S+VN G ++V T S D TVK+WD++
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 381 TDCLQTFK 388
+QTF+
Sbjct: 185 KAAIQTFQ 192
Score = 186 (70.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 44/159 (27%), Positives = 81/159 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
++ DG L S S D + VWD +G+ K L+ T ++ C R +++
Sbjct: 118 YNTDGSMLFSASTDKTV-AVWDSETGERVKRLK---GHTSFVNS----CYPARRGPQLVC 169
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
+GS DG +K+W IR ++ + + V ++ F+ QI+S D+ ++ L+ K
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 227
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
L RGH+ V +++GS +++ + D TV+VWD++
Sbjct: 228 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 152 (58.6 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 50/166 (30%), Positives = 83/166 (50%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 278
AR P Q + + S DG +++ WD ++K Q TF + VL + F+ S+
Sbjct: 161 ARRGP--QLVCTGSDDGTVKL-WD-----IRKKAAIQ---TFQ-NTYQVLAVTFNDTSDQ 208
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK- 337
+ SG D IKVW +R + L R H++ VT L S +GS +LS + D+T R+ ++
Sbjct: 209 IISGGIDNDIKVWDLRQNK-LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Query: 338 ---SGKLLKEFRG--HSSYVN--DAIFTNDGSRVVTASSDCTVKVW 376
+ +K F+G H+ N ++ DGS++ S+D + W
Sbjct: 268 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPW 313
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 48/222 (21%), Positives = 96/222 (43%)
Query: 292 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSS 350
R S Q L H V F +GS + S FD + + +GHS
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSG 111
Query: 351 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 410
V + + DGS + +AS+D TV VWD ++ + ++ L+G + VNS + + P
Sbjct: 112 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR------LKGHTSFVNSCYPARRGP 165
Query: 411 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 469
+ + ++ + ++ + +++F + + +A + + I G D ++ +
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ----VLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 470 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ KL + M+ H V G++ + L + D T+++W
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 196 (74.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 56/171 (32%), Positives = 83/171 (48%)
Query: 209 KFGTKSH-AECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
KF TKS+ + F P ++++ G I++ WDY G L + DE H+ V
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQL-WDYRMGTLID----RFDE----HEGPV 54
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
+ F + SG D KIKVW ++ +CL L H + + ++ F + I+S S
Sbjct: 55 RGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTL-LGHLDYIRTVQFHHENPWIVSASD 113
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
D T RI +S + GH+ YV A F VV+AS D TV+VWD+
Sbjct: 114 DQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 116 (45.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 38/159 (23%), Positives = 67/159 (42%)
Query: 278 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 337
+LAS G I++W R G + R + H V + F +S D ++ K
Sbjct: 24 ILAS-LHSGVIQLWDYRMGTLIDRFDE-HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYK 81
Query: 338 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 397
+ + L GH Y+ F ++ +V+AS D T+++W+ +S C+ L G +
Sbjct: 82 THRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISV------LTGHN 135
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFS 436
V PK D +V + ++ + + KS S
Sbjct: 136 HYVMCASFHPKE-DLVVSASLDQTVRVWDIGALKKKSAS 173
Score = 55 (24.4 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 9/37 (24%), Positives = 23/37 (62%)
Query: 476 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
++++++ H++ V + HP L+ + +D +KLW+
Sbjct: 196 VKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWR 232
Score = 48 (22.0 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 17/83 (20%), Positives = 36/83 (43%)
Query: 431 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 488
+VK G G ++ A P I +DR + + K + ++ H +V
Sbjct: 195 IVKYVLEGHDRGVNW--ASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVS 252
Query: 489 GVTHHPHRNLLATYGEDCTMKLW 511
V H ++++ + ED ++++W
Sbjct: 253 SVMFHAKQDIIVSNSEDKSIRVW 275
Score = 40 (19.1 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 466 LYCFSHQSGKLEHLMKVHE--KDVIGVTHH 493
LY + KL LMK+ E +V+G H+
Sbjct: 708 LYLITGNLDKLSKLMKIAEVKNNVMGQFHN 737
Score = 40 (19.1 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 23/85 (27%), Positives = 37/85 (43%)
Query: 393 LRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVS 451
LRG +V+SV +F D IV ++ SI + + +++F +RE F
Sbjct: 244 LRGHMNNVSSV-MFHAKQDIIVSNSEDKSIRVWDATKRTGIQTF---RREHDRF------ 293
Query: 452 PKGEWIYCVGEDRNLYCFSHQSGKL 476
WI V + NL H +G +
Sbjct: 294 ----WILAVHPEINLLAAGHDNGMI 314
>FB|FBgn0037094 [details] [associations]
symbol:CG7611 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00530000063585
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 OMA:IRGQFYQ
EMBL:AY069717 RefSeq:NP_001163489.1 RefSeq:NP_649326.1
RefSeq:NP_730644.1 RefSeq:NP_730645.1 RefSeq:NP_730646.1
RefSeq:NP_730647.1 RefSeq:NP_730648.1 RefSeq:NP_730649.1
RefSeq:NP_730650.1 UniGene:Dm.7009 ProteinModelPortal:Q7K0L4
SMR:Q7K0L4 IntAct:Q7K0L4 STRING:Q7K0L4 PaxDb:Q7K0L4 PRIDE:Q7K0L4
EnsemblMetazoa:FBtr0078359 EnsemblMetazoa:FBtr0078361
EnsemblMetazoa:FBtr0078362 EnsemblMetazoa:FBtr0078363
EnsemblMetazoa:FBtr0078364 EnsemblMetazoa:FBtr0078365
EnsemblMetazoa:FBtr0078366 EnsemblMetazoa:FBtr0301197
EnsemblMetazoa:FBtr0301198 GeneID:40386 KEGG:dme:Dmel_CG7611
FlyBase:FBgn0037094 InParanoid:Q7K0L4 OrthoDB:EOG4BG7B3
PhylomeDB:Q7K0L4 GenomeRNAi:40386 NextBio:818511 Bgee:Q7K0L4
Uniprot:Q7K0L4
Length = 630
Score = 198 (74.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 123/542 (22%), Positives = 233/542 (42%)
Query: 3 LEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRW---DAI 59
L+ +++I+++ Q+ + L ++ QTL E L S F + G W D+
Sbjct: 93 LDKSNQEIIRLIGQYLHDVGLDKSVQTLMLESGCYLEH-PSATKFREHVLMGDWSKADSD 151
Query: 60 LPQVAQLKLPRNKLEDLYEQ--IVLEMIELRELDTARAILRQTQAMGVMKQE-QPERY-- 114
L + L + KL + E I+LE L LD + A+ V++ E P ++
Sbjct: 152 LKDLEPL-IDNGKLATITEMKFILLEQKYLEHLDDGNPL----DALHVLRSELTPLQHNI 206
Query: 115 LRLEHLLVRTYFDAHE-AYQDSTKEXXXXXXXXXXXXEVSV-VPPS------RLMALIGQ 166
R+ L ++ YQ + E + +PPS RL L+ Q
Sbjct: 207 TRVHQLSSYMMCSTNQDLYQRAKWEGKGILSRALVMERLQTFMPPSVMMSPRRLRTLLQQ 266
Query: 167 ALKWQ-QHQGLLPPGTQFDLFRGTAAMKQD---VEDMYPTTLSHTIKFGTKSHAEC--AR 220
A++ Q QH + +L T ++ D D +P TI+ T E +
Sbjct: 267 AVELQSQHCPCHDMAWETNL--ETVSLLTDHCCTTDGFPM---QTIQILTDHCDEVWFCK 321
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM-L 279
FSPDG L + S D + ++WD KL + D + +V + +S DS++ L
Sbjct: 322 FSPDGLKLATGSKDSTV-IIWDVDPYKLTLKHRRVLDGQAQL---SVSFVSWSPDSKLIL 377
Query: 280 ASGSQDG-KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 338
G++D ++ +W + G+ + + ++ + + FSRDG++ + + L +
Sbjct: 378 VGGTEDSHELYIWNVDDGKLVVKFSQSLEDSLACGAFSRDGARFVCGGQKGQLYLCDL-N 436
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC-LQTFKPPPPLRGGD 397
G ++ + G VN F D ++ A + ++ ++ S + P P+
Sbjct: 437 GTIVDSWEGVR--VNSIAFRADNKTILAADNHYRIRGYNFDSPRSDFDILREPHPIM--T 492
Query: 398 ASVNSVHLFPKNPDHIVVCNKTSS-IYIMTLQGQ-VVKSFSSGKREGGDFVAACVSPKGE 455
S+NS D + + N ++ +++ ++ + +V+ F G R+ + +C E
Sbjct: 493 FSINSA-------DRLALLNVSNQGLHLWDIEDKCLVRRFQ-GIRQSNFAIHSCFGGVNE 544
Query: 456 WIYCVG-EDRNLYCFSHQSGKLEHLMKV--HEKDVIGVTHHP-HRNLLATYGEDCTMKLW 511
G ED+ +Y + H + E L K+ H K V V+ +P + +LLA+ +D T+++W
Sbjct: 545 SFVASGSEDKVVYIW-HIKRE-EPLAKLAGHTKTVNCVSWNPVYPSLLASASDDATVRIW 602
Query: 512 KP 513
P
Sbjct: 603 GP 604
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 200 (75.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 249 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 308
KKD + A T + H++ + I + + ++ A+ SQD +K+W + + + + + +AH
Sbjct: 512 KKDKKISASVTKIAHEKDINSISIAPNDKIFATASQDSYVKLWNVNNLEPITSI-KAHRR 570
Query: 309 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 368
GV + FS L+ S D T +I L LK GH V A F + G ++V+ +
Sbjct: 571 GVWHVEFSPIDQCFLTCSADGTIKIWSLSDYTCLKTLEGHKGSVLKASFISFGMQIVSVA 630
Query: 369 SDCTVKVWDLKSTDCLQTFK 388
S+ +K+W++K+ +CL TF+
Sbjct: 631 SEGLIKLWNIKTNECLNTFE 650
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/155 (25%), Positives = 68/155 (43%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
+P+ + + S D ++++ W+ L+ +A + H +EFS + +
Sbjct: 536 APNDKIFATASQDSYVKL-WNV--NNLEPITSIKAHRRGVWH------VEFSPIDQCFLT 586
Query: 282 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 341
S DG IK+W + CL+ LE H V F G QI+S + + ++ +K+ +
Sbjct: 587 CSADGTIKIWSLSDYTCLKTLE-GHKGSVLKASFISFGMQIVSVASEGLIKLWNIKTNEC 645
Query: 342 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
L F GH S + D R +T SD + W
Sbjct: 646 LNTFEGHESKIWALSVAKDQERFITGGSDSKLIAW 680
Score = 138 (53.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 48/208 (23%), Positives = 90/208 (43%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
H+ + I+ ++AS S D +KVW + G C + H + VT L F ++
Sbjct: 128 HEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNFQ--HDDVVTMLKFHPTLLKL 185
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 382
++ D R++ L + + + H S ++ F+N G ++++ D + VWD+ S +
Sbjct: 186 VTVCLDLNIRVYDLVTKECVI-LTNHLSQISGITFSNSGKELISSGRDKVLNVWDMLSKN 244
Query: 383 CLQTFKPPPPLRGGDASV--NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKR 440
+T L GG ++ S + P+N I + + M +K+
Sbjct: 245 PKKTIPIYQEL-GGIITLPKESYNSLPEN-SKIKIEKIREKVKTMAAHADKIKNGDDITI 302
Query: 441 E-GGDFVA-ACVSPKGEWIYCVGEDRNL 466
GG+ V A + GE C+ D+N+
Sbjct: 303 VIGGEEVLRAWCTETGE---CIWNDQNI 327
Score = 126 (49.4 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 33/120 (27%), Positives = 61/120 (50%)
Query: 270 IEFSRDSEMLASGSQDG-KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 328
+ S DS+ + S Q G +IK+ G + ++E +++ S + +IL +
Sbjct: 53 LRISEDSKFIVS--QAGYEIKIIDTEHGTVISKIES--DTKISTFALSPNNEEILIGCSN 108
Query: 329 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
+ + ++ L+K ++GH +N+ + G+ V +ASSD TVKVWDL+ C F+
Sbjct: 109 LQIKQYRIEDQSLVKIWKGHEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNFQ 168
Score = 44 (20.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 480 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+K H + V V P T D T+K+W
Sbjct: 565 IKAHRRGVWHVEFSPIDQCFLTCSADGTIKIW 596
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 196 (74.1 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 75/298 (25%), Positives = 130/298 (43%)
Query: 217 ECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDS 276
E +P+ ++L S S DG I + WD L G+ D+ H ++V C+++ D
Sbjct: 221 EPLHINPECRYLASASKDGSIRI-WDTLMGR--------CDKILTGHTQSVTCVKWGGDG 271
Query: 277 EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFD-STARIH 334
+L S SQD IKVWR + G R L+ H+ V ++ S D +L T +F+ + A I+
Sbjct: 272 -LLYSSSQDRTIKVWRSQDGILCRTLQ-GHAHWVNTMALSTD--YVLRTGAFEPAEATIN 327
Query: 335 GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLR 394
L E + + D + R+V+ S D T+ +W + D KP +
Sbjct: 328 PQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWR-PAEDK----KPLERMT 382
Query: 395 GGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 454
G A +N V LF +PD ++ + + I +G+ K +S + S
Sbjct: 383 GHQALINQV-LF--SPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADS 439
Query: 455 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
+ D L + ++ KL + H +V P +A+ G+D +++W+
Sbjct: 440 RLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIWR 497
Score = 143 (55.4 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 50/161 (31%), Positives = 78/161 (48%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
FSP G++L S S D + WD LS + Q+ A H VL I +S D + LA
Sbjct: 135 FSPTGKYLASGSGDTTVRF-WD-LSTETP---QFTAKG----HRHWVLSIAWSPDGKKLA 185
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF-----SRDGSQILSTSFDSTARIHG 335
SG ++ +I +W +G + R+ HS+ +T L + + + + S S D + RI
Sbjct: 186 SGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWD 245
Query: 336 LKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 376
G+ K GH+ V + DG + ++S D T+KVW
Sbjct: 246 TLMGRCDKILTGHTQSVTCVKWGGDGL-LYSSSQDRTIKVW 285
Score = 37 (18.1 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 494 PHRNLLATYGEDCTMKLWKP 513
P R L + +D T+ LW+P
Sbjct: 354 PER--LVSGSDDFTLFLWRP 371
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 198 (74.8 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 82/325 (25%), Positives = 131/325 (40%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
E Y P H TK + F G L+SCS D I++ W+ + +
Sbjct: 356 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKL-WEVYGDR-------R 407
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
TF+ H + V I F+ S + D +K+W +GQC+ R
Sbjct: 408 CLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNP 467
Query: 316 SRDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++
Sbjct: 468 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLR 527
Query: 375 VWDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 432
VW+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 528 VWEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF- 578
Query: 433 KSFSSGKREGGDFVA--AC-VSPKGEWIYCVGEDRN--LYCFSHQSGKLEHLMKVHEKDV 487
+ K G VA AC V + Y + D N L + ++ KL K H+K
Sbjct: 579 -RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVC 637
Query: 488 IGVTHHPHR-NLLATYGEDCTMKLW 511
IG HPH + + T G D +KLW
Sbjct: 638 IGAVWHPHETSKVITCGWDGLIKLW 662
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 197 (74.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 79/307 (25%), Positives = 137/307 (44%)
Query: 211 GTKSHA-ECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLC 269
G + H C + D LV+ S D ++V W G ++ Y T + H V
Sbjct: 253 GHEDHVITCMQIHDD--VLVTGSDDNTLKV-WCIDKG----EVMY----TLVGHTGGVWT 301
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
+ S+ + SGS D +KVW G L L+ H+ V + + GS +++ S D+
Sbjct: 302 SQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQ-GHTSTVRCMAMA--GSILVTGSRDT 358
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
T R+ ++SG+ L GH + V F DG+ VV+ D TVK+W+ + C++T
Sbjct: 359 TLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRT--- 413
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKT--SSIYIMTL---QGQVVKSFSSGKREGGD 444
L G + V S+ LF + +VC+ + +SI + +GQ + G
Sbjct: 414 ---LTGHNNRVYSL-LFES--ERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS--- 464
Query: 445 FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGE 504
+ + + +G + D ++ + G H++ H + + RN++AT +
Sbjct: 465 -LTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFG-RNMVATSSD 522
Query: 505 DCTMKLW 511
D T+KLW
Sbjct: 523 DGTVKLW 529
Score = 141 (54.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 47/172 (27%), Positives = 82/172 (47%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + C +F DG +VS +D F +W+ +G+ + T H+ V +
Sbjct: 376 GHHAAVRCVQF--DGTTVVSGGYD-FTVKIWNAHTGRCIR--------TLTGHNNRVYSL 424
Query: 271 EFSRDSEMLASGSQDGKIKVW---RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
F + ++ SGS D I+VW R +C+ L+ H+ +TS + R G+ ++S +
Sbjct: 425 LFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ-GHTS-LTSGMQLR-GNILVSCNA 481
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
DS R+ + G + GH S + + + V T+S D TVK+WD++
Sbjct: 482 DSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGR-NMVATSSDDGTVKLWDIE 532
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 197 (74.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 79/307 (25%), Positives = 137/307 (44%)
Query: 211 GTKSHA-ECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLC 269
G + H C + D LV+ S D ++V W G ++ Y T + H V
Sbjct: 253 GHEDHVITCMQIHDD--VLVTGSDDNTLKV-WCIDKG----EVMY----TLVGHTGGVWT 301
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
+ S+ + SGS D +KVW G L L+ H+ V + + GS +++ S D+
Sbjct: 302 SQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQ-GHTSTVRCMAMA--GSILVTGSRDT 358
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
T R+ ++SG+ L GH + V F DG+ VV+ D TVK+W+ + C++T
Sbjct: 359 TLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRT--- 413
Query: 390 PPPLRGGDASVNSVHLFPKNPDHIVVCNKT--SSIYIMTL---QGQVVKSFSSGKREGGD 444
L G + V S+ LF + +VC+ + +SI + +GQ + G
Sbjct: 414 ---LTGHNNRVYSL-LFES--ERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS--- 464
Query: 445 FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGE 504
+ + + +G + D ++ + G H++ H + + RN++AT +
Sbjct: 465 -LTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFG-RNMVATSSD 522
Query: 505 DCTMKLW 511
D T+KLW
Sbjct: 523 DGTVKLW 529
Score = 141 (54.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 47/172 (27%), Positives = 82/172 (47%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G + C +F DG +VS +D F +W+ +G+ + T H+ V +
Sbjct: 376 GHHAAVRCVQF--DGTTVVSGGYD-FTVKIWNAHTGRCIR--------TLTGHNNRVYSL 424
Query: 271 EFSRDSEMLASGSQDGKIKVW---RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
F + ++ SGS D I+VW R +C+ L+ H+ +TS + R G+ ++S +
Sbjct: 425 LFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ-GHTS-LTSGMQLR-GNILVSCNA 481
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
DS R+ + G + GH S + + + V T+S D TVK+WD++
Sbjct: 482 DSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGR-NMVATSSDDGTVKLWDIE 532
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 191 (72.3 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 69/279 (24%), Positives = 126/279 (45%)
Query: 195 DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQY 254
D+++ L H +K G S DGQ + S S D + +WD SG K L +
Sbjct: 68 DLQEDNTLKLRHKLK-GHALGVVSVAVSSDGQTIASSSLDSTM-CLWDARSGDKKHLLSF 125
Query: 255 QADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV 314
+ + ++FS ++ + SG DGKI ++ + +G+ + L+ + + S+
Sbjct: 126 GPVDLWT--------VQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIA 177
Query: 315 FSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 374
+S DG I S + D I + +GK+++ GH+ V F+ + ++TAS D +K
Sbjct: 178 YSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMK 237
Query: 375 VWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVK 433
++D+ +D + T G AS F ++ H + +S+ I T + + +
Sbjct: 238 LYDVTHSDVVGTLS-------GHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLH 290
Query: 434 SFSSGKREGGDFV-AACVSPKGEWIYCVGEDRNL---YC 468
+F+ E D V SP + + ED++L YC
Sbjct: 291 TFA----EHTDQVWGVRYSPGNDKVASASEDKSLNIYYC 325
Score = 146 (56.5 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 64/288 (22%), Positives = 120/288 (41%)
Query: 227 FLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDG 286
FLV+ D ++V WD L++D + H V+ + S D + +AS S D
Sbjct: 54 FLVTGGLDDLVKV-WD-----LQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDS 107
Query: 287 KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFR 346
+ +W RSG L + + ++ FS ++S D ++ +++GK +
Sbjct: 108 TMCLWDARSGDKKHLLSFGPVD-LWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLD 166
Query: 347 GHSS-YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP-PLRGGDASVNSVH 404
+ Y ++ DG + + + D + ++D+ + +QT + P+R S NS
Sbjct: 167 AQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQL 226
Query: 405 LFPKNPD-HIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED 463
L + D H+ + + T S + TL G E G A+ S I+ E
Sbjct: 227 LLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSER 286
Query: 464 RNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ L+ F+ H V GV + P + +A+ ED ++ ++
Sbjct: 287 KCLHTFAE-----------HTDQVWGVRYSPGNDKVASASEDKSLNIY 323
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 194 (73.4 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 50/170 (29%), Positives = 79/170 (46%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMH-DETVLC 269
G + ++ P G L SCS D +++ W DLQ + E + + T
Sbjct: 360 GHTNEVNAIKWDPSGMLLASCSDDMTLKI-WSMKQDACVHDLQAHSKEIYTIKWSPTGPA 418
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
+ MLAS S D +++W + G C+ L + H E V S+ FS DG + S SFD
Sbjct: 419 TSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTK-HQEPVYSVAFSPDGKYLASGSFDK 477
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
I +SG L+ +RG + + + G +V ++SD +V V DL+
Sbjct: 478 CVHIWNTQSGSLVHSYRGTGG-IFEVCWNARGDKVGASASDGSVCVLDLR 526
Score = 151 (58.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 39/140 (27%), Positives = 69/140 (49%)
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
+TF H V I++ +LAS S D +K+W ++ C+ L+ AHS+ + ++ +S
Sbjct: 356 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQ-AHSKEIYTIKWSP 414
Query: 318 DG-------SQIL--STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 368
G S I+ S SFDST R+ ++ G + H V F+ DG + + S
Sbjct: 415 TGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGS 474
Query: 369 SDCTVKVWDLKSTDCLQTFK 388
D V +W+ +S + +++
Sbjct: 475 FDKCVHIWNTQSGSLVHSYR 494
Score = 137 (53.3 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 69/343 (20%), Positives = 140/343 (40%)
Query: 155 VPPSRLMALIGQALK-----WQQHQGLLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIK 209
+PPS+ L G + W LL G+ R + L H I+
Sbjct: 170 IPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 229
Query: 210 FG---TKSHAECAR--FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHD 264
G S+ + ++ DG L + S+DGF + W G L T H
Sbjct: 230 EGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARI-WTE-DGNLAS--------TLGQHK 279
Query: 265 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILS 324
+ +++++ + S D +W +G+ ++ HS + + ++ + S
Sbjct: 280 GPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFP-FHSAPALDVDW-QNNTTFAS 337
Query: 325 TSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL 384
S D + L + +K F+GH++ VN + G + + S D T+K+W +K C+
Sbjct: 338 CSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACV 397
Query: 385 QTFKPPPPLRGGDASVNSVHLFP-----KNPD-HIVVCNKT--SSIYIMTLQ-GQVVKSF 435
L+ + ++ P NP+ +I++ + + S++ + ++ G + +
Sbjct: 398 HD------LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTL 451
Query: 436 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 478
+ K + + A SP G+++ D+ ++ ++ QSG L H
Sbjct: 452 T--KHQEPVYSVA-FSPDGKYLASGSFDKCVHIWNTQSGSLVH 491
Score = 127 (49.8 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 54/255 (21%), Positives = 106/255 (41%)
Query: 264 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
++ V ++++ D +LA+GS DG ++W G L + H + +L +++ G+ IL
Sbjct: 238 NKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQ-HKGPIFALKWNKKGNYIL 295
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
S D T I +G+ ++F HS+ D + N+ + + S+D + V L
Sbjct: 296 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN-TTFASCSTDMCIHVCRLGCDRP 354
Query: 384 LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKRE- 441
++TF+ G VN++ P + C+ ++ I ++ Q V + +E
Sbjct: 355 VKTFQ------GHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQDACVHDLQAHSKEI 407
Query: 442 ----GGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 496
A +P + D + + + G H + H++ V V P
Sbjct: 408 YTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDG 467
Query: 497 NLLATYGEDCTMKLW 511
LA+ D + +W
Sbjct: 468 KYLASGSFDKCVHIW 482
Score = 45 (20.9 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 9/33 (27%), Positives = 22/33 (66%)
Query: 153 SVVPPSRLMALIGQALKWQQHQ-GLLPPGTQFD 184
++VPP+ L++++ + L++ + + + GT FD
Sbjct: 42 TLVPPAALISILQKGLQYVEAEISINEDGTVFD 74
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 194 (73.4 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 50/170 (29%), Positives = 79/170 (46%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMH-DETVLC 269
G + ++ P G L SCS D +++ W DLQ + E + + T
Sbjct: 360 GHTNEVNAIKWDPSGMLLASCSDDMTLKI-WSMKQDACVHDLQAHSKEIYTIKWSPTGPA 418
Query: 270 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
+ MLAS S D +++W + G C+ L + H E V S+ FS DG + S SFD
Sbjct: 419 TSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTK-HQEPVYSVAFSPDGKYLASGSFDK 477
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 379
I +SG L+ +RG + + + G +V ++SD +V V DL+
Sbjct: 478 CVHIWNTQSGSLVHSYRGTGG-IFEVCWNARGDKVGASASDGSVCVLDLR 526
Score = 151 (58.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 39/140 (27%), Positives = 69/140 (49%)
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
+TF H V I++ +LAS S D +K+W ++ C+ L+ AHS+ + ++ +S
Sbjct: 356 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQ-AHSKEIYTIKWSP 414
Query: 318 DG-------SQIL--STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 368
G S I+ S SFDST R+ ++ G + H V F+ DG + + S
Sbjct: 415 TGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGS 474
Query: 369 SDCTVKVWDLKSTDCLQTFK 388
D V +W+ +S + +++
Sbjct: 475 FDKCVHIWNTQSGSLVHSYR 494
Score = 137 (53.3 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 69/343 (20%), Positives = 140/343 (40%)
Query: 155 VPPSRLMALIGQALK-----WQQHQGLLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIK 209
+PPS+ L G + W LL G+ R + L H I+
Sbjct: 170 IPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 229
Query: 210 FG---TKSHAECAR--FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHD 264
G S+ + ++ DG L + S+DGF + W G L T H
Sbjct: 230 EGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARI-WTE-DGNLAS--------TLGQHK 279
Query: 265 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILS 324
+ +++++ + S D +W +G+ ++ HS + + ++ + S
Sbjct: 280 GPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFP-FHSAPALDVDW-QNNTTFAS 337
Query: 325 TSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL 384
S D + L + +K F+GH++ VN + G + + S D T+K+W +K C+
Sbjct: 338 CSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACV 397
Query: 385 QTFKPPPPLRGGDASVNSVHLFP-----KNPD-HIVVCNKT--SSIYIMTLQ-GQVVKSF 435
L+ + ++ P NP+ +I++ + + S++ + ++ G + +
Sbjct: 398 HD------LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTL 451
Query: 436 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 478
+ K + + A SP G+++ D+ ++ ++ QSG L H
Sbjct: 452 T--KHQEPVYSVA-FSPDGKYLASGSFDKCVHIWNTQSGSLVH 491
Score = 127 (49.8 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 54/255 (21%), Positives = 106/255 (41%)
Query: 264 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
++ V ++++ D +LA+GS DG ++W G L + H + +L +++ G+ IL
Sbjct: 238 NKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQ-HKGPIFALKWNKKGNYIL 295
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
S D T I +G+ ++F HS+ D + N+ + + S+D + V L
Sbjct: 296 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN-TTFASCSTDMCIHVCRLGCDRP 354
Query: 384 LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKRE- 441
++TF+ G VN++ P + C+ ++ I ++ Q V + +E
Sbjct: 355 VKTFQ------GHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQDACVHDLQAHSKEI 407
Query: 442 ----GGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 496
A +P + D + + + G H + H++ V V P
Sbjct: 408 YTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDG 467
Query: 497 NLLATYGEDCTMKLW 511
LA+ D + +W
Sbjct: 468 KYLASGSFDKCVHIW 482
Score = 45 (20.9 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 9/33 (27%), Positives = 22/33 (66%)
Query: 153 SVVPPSRLMALIGQALKWQQHQ-GLLPPGTQFD 184
++VPP+ L++++ + L++ + + + GT FD
Sbjct: 42 TLVPPAALISILQKGLQYVEAEISINEDGTVFD 74
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 196 (74.1 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 228 LVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGK 287
+VS S D + V WD +G Q M H V C+++ D + SG+ D
Sbjct: 396 VVSGSRDATLRV-WDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFM 444
Query: 288 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG 347
+KVW + CL L+ H+ V SL F DG ++S S D++ R+ +++G + G
Sbjct: 445 VKVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG 501
Query: 348 HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 390
H S + + D +V+ ++D TVK+WD+K+ CLQT + P
Sbjct: 502 HQS-LTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQTLQGP 542
Score = 182 (69.1 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 49/172 (28%), Positives = 86/172 (50%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
T H TV C+ + + SGS+D ++VW I +GQCL L H V + + D
Sbjct: 378 TLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQY--D 432
Query: 319 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
G +++S ++D ++ ++ L +GH++ V F DG VV+ S D +++VWD+
Sbjct: 433 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDV 490
Query: 379 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV-VCNKTSSIYIMTLQG 429
++ +C+ T L G +++ L N D V + + + + TLQG
Sbjct: 491 ETGNCIHTLTGHQSLTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQTLQG 541
Score = 171 (65.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 55/181 (30%), Positives = 94/181 (51%)
Query: 208 IKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
+ G + C ++ DG+ +VS ++D F+ VWD + + L T H V
Sbjct: 418 VLMGHVAAVRCVQY--DGRRVVSGAYD-FMVKVWD---PETETCLH-----TLQGHTNRV 466
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
++F D + SGS D I+VW + +G C+ L H + +TS + +D ++S +
Sbjct: 467 YSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT-GH-QSLTSGMELKDNI-LVSGNA 521
Query: 328 DSTARIHGLKSGKLLKEFRG---HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL 384
DST +I +K+G+ L+ +G H S V F + V+T+S D TVK+WDLK+ + +
Sbjct: 522 DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFI 579
Query: 385 Q 385
+
Sbjct: 580 R 580
Score = 138 (53.6 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 45/150 (30%), Positives = 75/150 (50%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
V D T HT++ G + +F DG +VS S D I V WD +G
Sbjct: 447 VWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRV-WDVETGN-------- 494
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSL 313
T H +E +D+ +L SG+ D +K+W I++GQCL+ L+ H VT L
Sbjct: 495 CIHTLTGHQSLTSGMEL-KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCL 552
Query: 314 VFSRDGSQILSTSFDSTARIHGLKSGKLLK 343
F+++ ++++S D T ++ LK+G+ ++
Sbjct: 553 QFNKNF--VITSSDDGTVKLWDLKTGEFIR 580
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 47/193 (24%), Positives = 90/193 (46%)
Query: 321 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
+++S S D+T R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++
Sbjct: 395 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 452
Query: 381 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 439
CL T L+G N V+ + H+V + +SI + ++ G + + +
Sbjct: 453 ETCLHT------LQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--- 500
Query: 440 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP-HRNL 498
G + + + K + D + + ++G+ ++ K VT ++N
Sbjct: 501 --GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF 558
Query: 499 LATYGEDCTMKLW 511
+ T +D T+KLW
Sbjct: 559 VITSSDDGTVKLW 571
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 189 (71.6 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 61/202 (30%), Positives = 100/202 (49%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCI 270
G C +F+ + ++S S DG + WD S +++ +Q DE+ + + +
Sbjct: 107 GHAGKVNCVQFNEEATVMLSGSIDGTVRC-WDTRSRRMEP-IQI-LDES----QDGISSL 159
Query: 271 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
+ S + E+L +GS DG+++ + +R GQ +++ S +T + FSRDG LS+S DST
Sbjct: 160 KVS-EHELL-TGSVDGRVRRYDLRMGQL--QVDYIGSP-ITCVCFSRDGQCTLSSSLDST 214
Query: 331 ARIHGLKSGKLLKEFRGH--SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 388
R+ +G++L E+ GH Y D T+ + V++ S D V WDL T K
Sbjct: 215 VRLLDKSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWDLVEGSL--TLK 272
Query: 389 PPPPLRGGDASVNSVHLFPKNP 410
P G A V S+ P P
Sbjct: 273 LPV----GKAVVQSLSFHPTEP 290
Score = 161 (61.7 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 68/294 (23%), Positives = 129/294 (43%)
Query: 220 RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 279
RF+ DG +L++C D +++ W G L K T+ H VL + S D+ L
Sbjct: 32 RFNADGNYLLTCGSDKSLKL-WSVSRGTLLK--------TYSGHGYEVLDADGSYDNSQL 82
Query: 280 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 339
S S D + +W + SGQ R+L R H+ V + F+ + + +LS S D T R +S
Sbjct: 83 CSCSSDKTVILWDVASGQVTRKL-RGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSR 141
Query: 340 KLLK-EFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
++ + S ++ ++ ++T S D V+ +DL+ + P
Sbjct: 142 RMEPIQILDESQDGISSLKVSE-HELLTGSVDGRVRRYDLRMGQLQVDYIGSP------- 193
Query: 399 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWI 457
+ V F ++ + + S++ ++ G+++ +S G G + C++ K +
Sbjct: 194 -ITCV-CFSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYS-GHVNKGYKLDCCLTDKDTHV 250
Query: 458 YCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
ED ++Y + G L + V + V ++ HP L T E +++W
Sbjct: 251 LSCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSFHPTEPRLLTSMEG-RVQVW 303
Score = 151 (58.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 34/114 (29%), Positives = 56/114 (49%)
Query: 267 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS 326
V + F+ D L + D +K+W + G L+ H V S D SQ+ S S
Sbjct: 28 VRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYS-GHGYEVLDADGSYDNSQLCSCS 86
Query: 327 FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 380
D T + + SG++ ++ RGH+ VN F + + +++ S D TV+ WD +S
Sbjct: 87 SDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRS 140
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 297 QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAI 356
Q L R V ++ F+ DG+ +L+ D + ++ + G LLK + GH V DA
Sbjct: 15 QHLWRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDAD 74
Query: 357 FTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSV 403
+ D S++ + SSD TV +WD+ S T K LRG VN V
Sbjct: 75 GSYDNSQLCSCSSDKTVILWDVASGQV--TRK----LRGHAGKVNCV 115
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 198 (74.8 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 44/163 (26%), Positives = 85/163 (52%)
Query: 227 FLVSCSFDGFIEVVW--DYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ 284
F VS S D ++V W D +S ++ + + HD+ + + +R+ ++ +GS+
Sbjct: 461 FFVSGSGDRTLKV-WSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSE 519
Query: 285 DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKE 344
D +WR+ + L + H + S+ FS +++ S D T +I + G LK
Sbjct: 520 DRTASIWRLPDLVHVVTL-KGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKT 578
Query: 345 FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 387
F GH+S V A F DG++ V+ +D +K+W++ +++C+ T+
Sbjct: 579 FEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATY 621
Score = 144 (55.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/136 (29%), Positives = 66/136 (48%)
Query: 263 HDETVLCIEFSRDS-EMLASGSQDGKIKVWRIR-----SGQCL----RRLERAHSEGVTS 312
H+ +L + F++ S SGS D +KVW + S + + R + AH + + S
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINS 504
Query: 313 LVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCT 372
+ +R+ S + + S D TA I L + +GH + F+ V+TAS D T
Sbjct: 505 VAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKT 564
Query: 373 VKVWDLKSTDCLQTFK 388
VK+W + CL+TF+
Sbjct: 565 VKIWAISDGSCLKTFE 580
Score = 144 (55.7 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 51/198 (25%), Positives = 83/198 (41%)
Query: 195 DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQY 254
++ D +++ TI+ G SPD + L S I V WD + K +
Sbjct: 43 NIVDSTDSSVKSTIE-GESDTLTALALSPDDKLLFSAGHSRQIRV-WDLETLKCIR---- 96
Query: 255 QADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV 314
++ H+ V+ + +LA+ D K+ VW + G C R H V+S++
Sbjct: 97 ----SWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYF-RGHKGVVSSIL 151
Query: 315 FSRDGSQ--ILSTSFDSTARIHGLKSG----KLLKEFRGHSSYVNDAIFTNDGSRVVTAS 368
F D ++ ++S S D+T R+ L + K L H S V + DG + +A
Sbjct: 152 FHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAG 211
Query: 369 SDCTVKVWDLKSTDCLQT 386
D V +WDL C T
Sbjct: 212 RDKVVNLWDLHDYSCKAT 229
Score = 136 (52.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 35/148 (23%), Positives = 61/148 (41%)
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
T H + +EFS + + + S D +K+W I G CL+ E H+ V F D
Sbjct: 536 TLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFE-GHTSSVLRASFITD 594
Query: 319 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW-D 377
G+Q +S D ++ + + + + + H V + T D + +W D
Sbjct: 595 GTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHD 654
Query: 378 LKSTDCLQTFKPPPP--LRGGDASVNSV 403
++D F+ LRG + N+V
Sbjct: 655 STASDKEDDFRKEEEAILRGQELE-NAV 681
Score = 44 (20.5 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 445 FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG 489
F AA + P + CV D+ + +S +E V K ++G
Sbjct: 313 FTAAAMLPSDHGLLCVTADQQFFFYSVVEN-VEETELVLSKRLVG 356
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 188 (71.2 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 57/171 (33%), Positives = 82/171 (47%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
KF TKS + F P ++++ +G I++ WDY L D+ F HD V
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQL-WDYRMCTL-------IDK-FDEHDGPV 54
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
I+F + + SG D KIKVW + +CL L H + + + F + ILS S
Sbjct: 55 RGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHEYPWILSASD 113
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
D T R+ +S + GH+ YV A F VV+AS D TV+VWD+
Sbjct: 114 DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 60 (26.2 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 469 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
F ++H+++ H++ V HP L+ + +D +K+W+
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWR 233
Score = 54 (24.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 431 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 488
VVK G G ++ A P I +DR + + K + + H +V
Sbjct: 196 VVKHVLEGHDRGVNWAA--FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVS 253
Query: 489 GVTHHPHRNLLATYGEDCTMKLW 511
HP + L+ + ED ++++W
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVW 276
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 190 (71.9 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 53/176 (30%), Positives = 81/176 (46%)
Query: 206 HTIK-F-GTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMH 263
H +K F G + ++ P G L SCS D +++ W DLQ + E + +
Sbjct: 350 HPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKI-WSMKQDACVHDLQAHSKEIYTIK 408
Query: 264 -DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 322
T S MLAS S D +++W + G C L + H E V S+ FS DG +
Sbjct: 409 WSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMK-HQEPVYSVAFSPDGKYL 467
Query: 323 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
S SFD I +SG L+ ++G + + + G +V ++SD +V V DL
Sbjct: 468 ASGSFDKYVHIWNTQSGSLVHSYQGTGG-IFEVCWNARGDKVGASASDGSVCVLDL 522
Score = 147 (56.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 39/140 (27%), Positives = 68/140 (48%)
Query: 258 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 317
+TF H V I++ +LAS S D +K+W ++ C+ L+ AHS+ + ++ +S
Sbjct: 353 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQ-AHSKEIYTIKWSP 411
Query: 318 DG-------SQIL--STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 368
G S I+ S SFDST R+ ++ G H V F+ DG + + S
Sbjct: 412 TGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGS 471
Query: 369 SDCTVKVWDLKSTDCLQTFK 388
D V +W+ +S + +++
Sbjct: 472 FDKYVHIWNTQSGSLVHSYQ 491
Score = 144 (55.7 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 64/274 (23%), Positives = 113/274 (41%)
Query: 263 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQ-----------CLRRLERAH----S 307
H+ V ++ S++LASGS D ++W + C+R E H +
Sbjct: 178 HESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR--EGGHDVPSN 235
Query: 308 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
+ VTSL ++ DG+ + S+D ARI ++G L H + + G+ V++A
Sbjct: 236 KDVTSLDWNSDGTLLAMGSYDGFARIW-TENGNLASTLGQHKGPIFALKWNKKGNYVLSA 294
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL 427
D T +WD + + Q F P A + + +N C+ I++ L
Sbjct: 295 GVDKTTIIWDAHTGEAKQQF----PFHSAPA----LDVDWQNNMTFASCSTDMCIHVCRL 346
Query: 428 Q-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKD 486
VK+F E A P G + +D L +S + H ++ H K+
Sbjct: 347 GCDHPVKTFQGHTNEVN---AIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKE 403
Query: 487 VIGV--------THHPHRNL-LATYGEDCTMKLW 511
+ + T +P+ ++ LA+ D T++LW
Sbjct: 404 IYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 437
Score = 130 (50.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 55/266 (20%), Positives = 114/266 (42%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 280
++ DG L S+DGF + W +G L T H + +++++ +
Sbjct: 243 WNSDGTLLAMGSYDGFARI-WTE-NGNLAS--------TLGQHKGPIFALKWNKKGNYVL 292
Query: 281 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 340
S D +W +G+ ++ HS + + ++ S S D + L
Sbjct: 293 SAGVDKTTIIWDAHTGEAKQQFP-FHSAPALDVDW-QNNMTFASCSTDMCIHVCRLGCDH 350
Query: 341 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 400
+K F+GH++ VN + G + + S D T+K+W +K C+ L+ +
Sbjct: 351 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHD------LQAHSKEI 404
Query: 401 NSVHLFP-----KNPDH-IVVCNKT--SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSP 452
++ P NP+ I++ + + S++ + ++ Q V + + K + + A SP
Sbjct: 405 YTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVE-QGVCTHTLMKHQEPVYSVA-FSP 462
Query: 453 KGEWIYCVGEDRNLYCFSHQSGKLEH 478
G+++ D+ ++ ++ QSG L H
Sbjct: 463 DGKYLASGSFDKYVHIWNTQSGSLVH 488
Score = 127 (49.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 45/168 (26%), Positives = 75/168 (44%)
Query: 167 ALKWQQHQGLLPPGTQFDLFRGTAAMKQD--VEDMYPTTLS-HTIKFGTKSHAECARFSP 223
A+KW G+L D+ +MKQD V D+ + +TIK+ A +P
Sbjct: 364 AIKWDP-SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATS---NP 419
Query: 224 DGQF-LVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 282
+ L S SFD + + WD G T M H E V + FS D + LASG
Sbjct: 420 NSSIMLASASFDSTVRL-WDVEQGV--------CTHTLMKHQEPVYSVAFSPDGKYLASG 470
Query: 283 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 330
S D + +W +SG + + + G+ + ++ G ++ +++ D +
Sbjct: 471 SFDKYVHIWNTQSGSLVHSYQG--TGGIFEVCWNARGDKVGASASDGS 516
Score = 126 (49.4 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 53/255 (20%), Positives = 106/255 (41%)
Query: 264 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 323
++ V ++++ D +LA GS DG ++W +G L + H + +L +++ G+ +L
Sbjct: 235 NKDVTSLDWNSDGTLLAMGSYDGFARIWT-ENGNLASTLGQ-HKGPIFALKWNKKGNYVL 292
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 383
S D T I +G+ ++F HS+ D + N+ + + S+D + V L
Sbjct: 293 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMT-FASCSTDMCIHVCRLGCDHP 351
Query: 384 LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKRE- 441
++TF+ G VN++ P + C+ ++ I ++ Q V + +E
Sbjct: 352 VKTFQ------GHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQDACVHDLQAHSKEI 404
Query: 442 ----GGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 496
A +P + D + + + G H + H++ V V P
Sbjct: 405 YTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDG 464
Query: 497 NLLATYGEDCTMKLW 511
LA+ D + +W
Sbjct: 465 KYLASGSFDKYVHIW 479
Score = 48 (22.0 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 153 SVVPPSRLMALIGQALKWQQHQ-GLLPPGTQFD 184
++VPPS L++++ + L++ + + + GT FD
Sbjct: 42 TLVPPSALISILQKGLQYVEAEISINKDGTVFD 74
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 197 (74.4 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 58/189 (30%), Positives = 95/189 (50%)
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKD-------LQYQADE 258
HT GT C+R FLV+ S D +++ W L K + QA
Sbjct: 420 HTHSVGTIC---CSRLKES--FLVTGSQDCTVKL-WPLPEALLAKSTAADSGPVLLQAQT 473
Query: 259 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 318
T HD+ + + S + ++LA+GSQD K+W + Q L + H G+ ++ FS
Sbjct: 474 TRRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLG-VFTGHRRGLWNVQFSPT 532
Query: 319 GSQILST-SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
Q+L+T S D T ++ L+ LK F GH + V F + GS+++++ SD +K+W
Sbjct: 533 -DQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWT 591
Query: 378 LKSTDCLQT 386
+KS +C++T
Sbjct: 592 IKSNECVRT 600
Score = 151 (58.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 58/212 (27%), Positives = 95/212 (44%)
Query: 222 SPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 281
SPD + LV+ S + W + G + + ++A +H V + F S +LA+
Sbjct: 75 SPDDEVLVTAS-RALLLAQWAWREGTVTR--LWKA-----IHTAPVASMAFDATSTLLAT 126
Query: 282 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV-FSRDGSQIL--STSFDSTARIHGLKS 338
G DG ++VW I S GV LV F D +++L S++ D++ R+ L+
Sbjct: 127 GGCDGAVRVWDIVQHYGTHHFRG--SPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQD 184
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 398
L H S V F+ G ++++ D VWDL+S QT + P +A
Sbjct: 185 RSCLAVLTAHYSAVTSLSFSEGGHTMLSSGRDKICIVWDLQS---YQTTRTVPVFESVEA 241
Query: 399 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ 430
SV L P+ P + K+S ++ +T Q
Sbjct: 242 SV----LLPEQPAPALGV-KSSGLHFLTAGDQ 268
Score = 150 (57.9 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 59/194 (30%), Positives = 87/194 (44%)
Query: 225 GQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE-MLASGS 283
G SC+ D I + W K+ K Q H +V I SR E L +GS
Sbjct: 388 GWLFASCAKDQSIRI-W-----KMNKAGQVACVAQGSGHTHSVGTICCSRLKESFLVTGS 441
Query: 284 QDGKIKVWRIR-----------SGQCLRRLE---RAHSEGVTSLVFSRDGSQILSTSFDS 329
QD +K+W + SG L + + R H + + SL S + + + S D
Sbjct: 442 QDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCHDKDINSLAVSPNDKLLATGSQDR 501
Query: 330 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 389
TA++ L +LL F GH + + F+ + TAS+D T+K+W L+ CL+TF+
Sbjct: 502 TAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFE- 560
Query: 390 PPPLRGGDASVNSV 403
G DASV V
Sbjct: 561 -----GHDASVLKV 569
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 34/124 (27%), Positives = 57/124 (45%)
Query: 253 QYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTS 312
Q Q F H + ++FS ++LA+ S DG IK+W ++ CL+ E H V
Sbjct: 510 QCQLLGVFTGHRRGLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFE-GHDASVLK 568
Query: 313 LVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCT 372
+ F GSQ+LS+ D ++ +KS + ++ H V + +T SD
Sbjct: 569 VAFVSRGSQLLSSGSDGLLKLWTIKSNECVRTLDAHEDKVWGLHCSQLDDHAITGGSDSR 628
Query: 373 VKVW 376
+ +W
Sbjct: 629 IILW 632
Score = 141 (54.7 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 41/111 (36%), Positives = 63/111 (56%)
Query: 220 RFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEF-SRDSEM 278
+FSP Q L + S DG I++ W +D + +TF HD +VL + F SR S++
Sbjct: 528 QFSPTDQVLATASADGTIKL-WAL------QD--FSCLKTFEGHDASVLKVAFVSRGSQL 578
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 329
L+SGS DG +K+W I+S +C+R L+ AH + V L S+ ++ DS
Sbjct: 579 LSSGS-DGLLKLWTIKSNECVRTLD-AHEDKVWGLHCSQLDDHAITGGSDS 627
Score = 130 (50.8 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 42/168 (25%), Positives = 72/168 (42%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 278
A+ G +L C + ++ D SG L + L+ Q D+ E + + S D E+
Sbjct: 30 AQLDQTGHYLF-CVCGTKVNIL-DVASGALLRSLE-QEDQ------EDITSFDLSPDDEV 80
Query: 279 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 338
L + S+ + W R G R + H+ V S+ F + + + D R+ +
Sbjct: 81 LVTASRALLLAQWAWREGTVTRLWKAIHTAPVASMAFDATSTLLATGGCDGAVRVWDIVQ 140
Query: 339 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASS--DCTVKVWDLKSTDCL 384
FRG V+ F D +R++ SS D +++VW L+ CL
Sbjct: 141 HYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSCL 188
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 66/274 (24%), Positives = 119/274 (43%)
Query: 255 QADETFMMHDETVLCIEFSRDSEM-LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSL 313
Q + F + E VL + F S+ + S +KV+ +++ C ++ H++ V +L
Sbjct: 325 QLQKQFAGYSEEVLDVRFLGPSDSHIVVASNSPCLKVFELQTLAC--QILHGHTDIVLAL 382
Query: 314 VFSRDGSQILSTSFDSTARIHGL-KSGKL--LKEFRGHSSYVNDAIFTN-DGSRVVTASS 369
R G S + D + RI + K+G++ + + GH+ V + S +VT S
Sbjct: 383 DVFRKGWLFASCAKDQSIRIWKMNKAGQVACVAQGSGHTHSVGTICCSRLKESFLVTGSQ 442
Query: 370 DCTVKVWDL------KSTDCLQ---TFKPPPPLRGGDASVNSVHLFPKNPDHIVVC---N 417
DCTVK+W L KST + R D +NS+ + P D ++ +
Sbjct: 443 DCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCHDKDINSLAVSPN--DKLLATGSQD 500
Query: 418 KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 477
+T+ ++ + Q Q++ F+ G R G V SP + + D + ++ Q
Sbjct: 501 RTAKLWALP-QCQLLGVFT-GHRRGLWNVQ--FSPTDQVLATASADGTIKLWALQDFSCL 556
Query: 478 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 511
+ H+ V+ V + L + G D +KLW
Sbjct: 557 KTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLW 590
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 188 (71.2 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 57/171 (33%), Positives = 82/171 (47%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
KF TKS + F P ++++ +G I++ WDY L D+ F HD V
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQL-WDYRMCTL-------IDK-FDEHDGPV 54
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
I+F + + SG D KIKVW + +CL L H + + + F + ILS S
Sbjct: 55 RGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHEYPWILSASD 113
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
D T R+ +S + GH+ YV A F VV+AS D TV+VWD+
Sbjct: 114 DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 60 (26.2 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 469 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
F ++H+++ H++ V HP L+ + +D +K+W+
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWR 233
Score = 54 (24.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 431 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 488
VVK G G ++ A P I +DR + + K + + H +V
Sbjct: 196 VVKHVLEGHDRGVNWAA--FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVS 253
Query: 489 GVTHHPHRNLLATYGEDCTMKLW 511
HP + L+ + ED ++++W
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVW 276
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 189 (71.6 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 71/270 (26%), Positives = 123/270 (45%)
Query: 252 LQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVT 311
+Q + T H + + +S DS++L S SQDGK+ VW + + + S V
Sbjct: 43 IQMRTRRTLRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIP-LRSSWVM 101
Query: 312 SLVFSRDGSQILSTSFDSTARIHGLKS--G--KLLKEFRGHSSYVNDAIFTNDGSRVVTA 367
+ ++ G+ + D+ I+ LK+ G K+ +E H+ Y++ F +D S +VT+
Sbjct: 102 TCAYAPSGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNS-IVTS 160
Query: 368 SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV-VCNKTSSIYIMT 426
S D T +WD+++ F GD S+ + P I C+ T+ ++ +
Sbjct: 161 SGDTTCALWDIETGQQKTVFLG----HTGDCM--SLAVSPDFKLFISGACDATAKLWDVR 214
Query: 427 LQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMKVHEK 485
+G ++FS + D A C P GE I C G +D F ++ + E ++ HE
Sbjct: 215 -EGTCRQTFSGHE---SDINAICFFPNGEAI-CTGSDDATCRLFDLRADQ-ELIVYSHES 268
Query: 486 DVIGVTH----HPHRNLLATYGEDCTMKLW 511
+ G+T R LLA Y +D +W
Sbjct: 269 IICGITSVAFSRSGRLLLAGY-DDFNCNIW 297
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 49/185 (26%), Positives = 85/185 (45%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQ 255
V D Y T H I + CA ++P G F V+C G ++ + + K ++ +
Sbjct: 81 VWDTYTTNKVHAIPLRSSWVMTCA-YAPSGNF-VAC---GGLDNMCSIYNLKTREG-NVK 134
Query: 256 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 315
H + C F D+ ++ S S D +W I +GQ + + H+ SL
Sbjct: 135 VSRELSAHTGYLSCCRFLDDNSIVTS-SGDTTCALWDIETGQ-QKTVFLGHTGDCMSLAV 192
Query: 316 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 375
S D +S + D+TA++ ++ G + F GH S +N F +G + T S D T ++
Sbjct: 193 SPDFKLFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAICTGSDDATCRL 252
Query: 376 WDLKS 380
+DL++
Sbjct: 253 FDLRA 257
Score = 162 (62.1 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 65/298 (21%), Positives = 128/298 (42%)
Query: 221 FSPDGQFLVSCSFDGFIEVVWD-YLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 279
+S D + LVS S DG + +VWD Y + K+ + V+ ++ +
Sbjct: 63 WSTDSKLLVSASQDGKL-IVWDTYTTNKV---------HAIPLRSSWVMTCAYAPSGNFV 112
Query: 280 ASGSQDGKIKVWRIRSGQCLRRLER---AHSEGVTSLVFSRDGSQILSTSFDSTARIHGL 336
A G D ++ +++ + ++ R AH+ G S D + I+++S D+T + +
Sbjct: 113 ACGGLDNMCSIYNLKTREGNVKVSRELSAHT-GYLSCCRFLDDNSIVTSSGDTTCALWDI 171
Query: 337 KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGG 396
++G+ F GH+ + D ++ + D T K+WD++ C QTF G
Sbjct: 172 ETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFS------GH 225
Query: 397 DASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKSFSSGKREGGDFVAACVSPKGE 455
++ +N++ FP N + I + ++ + L+ Q + +S G + S G
Sbjct: 226 ESDINAICFFP-NGEAICTGSDDATCRLFDLRADQELIVYSHESIICG-ITSVAFSRSGR 283
Query: 456 WIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDV--IGVTHHPHRNLLATYGEDCTMKLW 511
+ +D N + + ++ H+ V +GVT +AT D +K+W
Sbjct: 284 LLLAGYDDFNCNIWDSLKAERVGILSGHDNRVSCLGVT--ADGMAVATGSWDSFLKIW 339
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 45/174 (25%), Positives = 76/174 (43%)
Query: 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDET 266
T+ G SPD + +S + D ++ WD G + +TF H+
Sbjct: 178 TVFLGHTGDCMSLAVSPDFKLFISGACDATAKL-WDVREGTCR--------QTFSGHESD 228
Query: 267 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE---GVTSLVFSRDGSQIL 323
+ I F + E + +GS D +++ +R+ Q L + +H G+TS+ FSR G +L
Sbjct: 229 INAICFFPNGEAICTGSDDATCRLFDLRADQEL--IVYSHESIICGITSVAFSRSGRLLL 286
Query: 324 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 377
+ D I + + GH + V+ T DG V T S D +K+W+
Sbjct: 287 AGYDDFNCNIWDSLKAERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 188 (71.2 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 57/171 (33%), Positives = 82/171 (47%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
KF TKS + F P ++++ +G I++ WDY L D+ F HD V
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQL-WDYRMCTL-------IDK-FDEHDGPV 54
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
I+F + + SG D KIKVW + +CL L H + + + F + ILS S
Sbjct: 55 RGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHEYPWILSASD 113
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
D T R+ +S + GH+ YV A F VV+AS D TV+VWD+
Sbjct: 114 DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 60 (26.2 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 469 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
F ++H+++ H++ V HP L+ + +D +K+W+
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWR 233
Score = 54 (24.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 431 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 488
VVK G G ++ A P I +DR + + K + + H +V
Sbjct: 196 VVKHVLEGHDRGVNWAA--FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVS 253
Query: 489 GVTHHPHRNLLATYGEDCTMKLW 511
HP + L+ + ED ++++W
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVW 276
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 188 (71.2 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 57/171 (33%), Positives = 82/171 (47%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
KF TKS + F P ++++ +G I++ WDY L D+ F HD V
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQL-WDYRMCTL-------IDK-FDEHDGPV 54
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
I+F + + SG D KIKVW + +CL L H + + + F + ILS S
Sbjct: 55 RGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHEYPWILSASD 113
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
D T R+ +S + GH+ YV A F VV+AS D TV+VWD+
Sbjct: 114 DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 60 (26.2 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 469 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
F ++H+++ H++ V HP L+ + +D +K+W+
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWR 233
Score = 54 (24.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 431 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 488
VVK G G ++ A P I +DR + + K + + H +V
Sbjct: 196 VVKHVLEGHDRGVNWAA--FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVS 253
Query: 489 GVTHHPHRNLLATYGEDCTMKLW 511
HP + L+ + ED ++++W
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVW 276
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 188 (71.2 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 57/171 (33%), Positives = 82/171 (47%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
KF TKS + F P ++++ +G I++ WDY L D+ F HD V
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQL-WDYRMCTL-------IDK-FDEHDGPV 54
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
I+F + + SG D KIKVW + +CL L H + + + F + ILS S
Sbjct: 55 RGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHEYPWILSASD 113
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
D T R+ +S + GH+ YV A F VV+AS D TV+VWD+
Sbjct: 114 DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 60 (26.2 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 469 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
F ++H+++ H++ V HP L+ + +D +K+W+
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWR 233
Score = 54 (24.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 431 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 488
VVK G G ++ A P I +DR + + K + + H +V
Sbjct: 196 VVKHVLEGHDRGVNWAA--FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVS 253
Query: 489 GVTHHPHRNLLATYGEDCTMKLW 511
HP + L+ + ED ++++W
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVW 276
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 188 (71.2 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 57/171 (33%), Positives = 82/171 (47%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVVWDYLSGKLKKDLQYQADETFMMHDETV 267
KF TKS + F P ++++ +G I++ WDY L D+ F HD V
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQL-WDYRMCTL-------IDK-FDEHDGPV 54
Query: 268 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 327
I+F + + SG D KIKVW + +CL L H + + + F + ILS S
Sbjct: 55 RGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHEYPWILSASD 113
Query: 328 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 378
D T R+ +S + GH+ YV A F VV+AS D TV+VWD+
Sbjct: 114 DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 60 (26.2 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 469 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 512
F ++H+++ H++ V HP L+ + +D +K+W+
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWR 233
Score = 54 (24.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 431 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 488
VVK G G ++ A P I +DR + + K + + H +V
Sbjct: 196 VVKHVLEGHDRGVNWAA--FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVS 253
Query: 489 GVTHHPHRNLLATYGEDCTMKLW 511
HP + L+ + ED ++++W
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVW 276
WARNING: HSPs involving 1030 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 513 501 0.00085 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1280
No. of states in DFA: 621 (66 KB)
Total size of DFA: 319 KB (2162 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.84u 0.13s 42.97t Elapsed: 00:00:01
Total cpu time: 43.00u 0.13s 43.13t Elapsed: 00:00:03
Start: Thu May 9 19:19:27 2013 End: Thu May 9 19:19:30 2013
WARNINGS ISSUED: 2