Query 010325
Match_columns 513
No_of_seqs 330 out of 2603
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 04:21:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010325.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010325hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lhh_A CBS domain protein; str 99.9 4.8E-27 1.7E-31 218.0 10.8 167 184-437 4-171 (172)
2 3oi8_A Uncharacterized protein 99.9 2.8E-25 9.6E-30 202.7 12.9 138 186-329 2-140 (156)
3 3ocm_A Putative membrane prote 99.9 3.9E-25 1.3E-29 206.2 11.4 153 204-440 14-167 (173)
4 3lv9_A Putative transporter; C 99.9 4.3E-24 1.5E-28 192.4 9.7 122 206-329 3-125 (148)
5 3oco_A Hemolysin-like protein 99.9 5.6E-24 1.9E-28 193.1 5.3 148 208-438 2-151 (153)
6 3kxr_A Magnesium transporter, 99.9 4.6E-22 1.6E-26 190.5 14.0 179 186-461 24-205 (205)
7 3lfr_A Putative metal ION tran 99.9 9E-22 3.1E-26 175.1 9.4 131 225-438 2-135 (136)
8 3jtf_A Magnesium and cobalt ef 99.8 3E-21 1E-25 170.0 11.7 105 223-329 2-106 (129)
9 3hf7_A Uncharacterized CBS-dom 99.8 2.6E-21 9E-26 170.9 8.5 103 225-329 1-107 (130)
10 3k6e_A CBS domain protein; str 99.8 6.1E-21 2.1E-25 174.7 8.1 103 223-329 12-122 (156)
11 3i8n_A Uncharacterized protein 99.8 7.9E-21 2.7E-25 167.4 7.7 106 222-329 2-109 (130)
12 3nqr_A Magnesium and cobalt ef 99.8 3.8E-20 1.3E-24 162.3 10.2 104 224-329 1-106 (127)
13 2qrd_G Protein C1556.08C; AMPK 99.8 2.9E-20 1E-24 189.0 5.2 211 207-429 2-243 (334)
14 2yvy_A MGTE, Mg2+ transporter 99.8 5.2E-19 1.8E-23 176.6 12.2 117 207-329 116-237 (278)
15 4esy_A CBS domain containing m 99.8 5.2E-19 1.8E-23 163.2 10.7 112 212-329 6-143 (170)
16 2v8q_E 5'-AMP-activated protei 99.8 2.8E-20 9.7E-25 189.0 -0.3 211 205-429 16-251 (330)
17 2zy9_A Mg2+ transporter MGTE; 99.8 2.5E-18 8.7E-23 184.4 14.8 134 186-329 110-257 (473)
18 3t4n_C Nuclear protein SNF4; C 99.8 5.5E-20 1.9E-24 186.1 1.0 213 205-429 8-248 (323)
19 2oux_A Magnesium transporter; 99.7 1.2E-17 4.1E-22 167.7 11.4 117 207-329 118-239 (286)
20 3ddj_A CBS domain-containing p 99.7 1.3E-18 4.4E-23 173.8 3.1 217 185-429 63-285 (296)
21 2emq_A Hypothetical conserved 99.7 5.5E-17 1.9E-21 146.6 11.1 109 217-329 2-119 (157)
22 4gqw_A CBS domain-containing p 99.7 4.9E-17 1.7E-21 145.4 10.3 104 224-329 3-123 (152)
23 3ctu_A CBS domain protein; str 99.7 1.8E-17 6.2E-22 150.0 7.4 108 218-329 7-122 (156)
24 3kh5_A Protein MJ1225; AMPK, A 99.7 1.6E-18 5.6E-23 170.7 -0.8 218 185-427 50-279 (280)
25 3kh5_A Protein MJ1225; AMPK, A 99.7 2.4E-17 8.3E-22 162.3 7.3 180 229-428 7-204 (280)
26 3kpb_A Uncharacterized protein 99.7 4.3E-17 1.5E-21 140.9 8.0 100 226-329 1-100 (122)
27 3lqn_A CBS domain protein; csg 99.7 4.6E-17 1.6E-21 146.2 8.2 105 221-329 10-123 (150)
28 3gby_A Uncharacterized protein 99.7 1.8E-16 6E-21 138.8 9.7 101 224-329 3-106 (128)
29 2yzi_A Hypothetical protein PH 99.7 4.2E-16 1.4E-20 137.7 12.2 104 221-329 2-109 (138)
30 3sl7_A CBS domain-containing p 99.7 1.3E-16 4.5E-21 147.0 8.8 103 225-329 3-136 (180)
31 2ef7_A Hypothetical protein ST 99.7 2.5E-16 8.7E-21 138.3 10.0 102 223-329 1-105 (133)
32 3fhm_A Uncharacterized protein 99.7 1.2E-16 3.9E-21 146.5 7.6 110 218-329 16-131 (165)
33 3k2v_A Putative D-arabinose 5- 99.6 1.2E-16 4.2E-21 143.7 6.6 102 226-329 28-133 (149)
34 2rih_A Conserved protein with 99.6 3.5E-16 1.2E-20 139.1 9.3 99 226-329 5-108 (141)
35 1yav_A Hypothetical protein BS 99.6 2.1E-16 7E-21 143.6 7.8 104 222-329 10-122 (159)
36 2rc3_A CBS domain; in SITU pro 99.6 4.1E-16 1.4E-20 137.5 8.9 100 227-329 7-112 (135)
37 2p9m_A Hypothetical protein MJ 99.6 7.3E-16 2.5E-20 136.0 10.1 103 223-329 5-116 (138)
38 4fry_A Putative signal-transdu 99.6 6.4E-16 2.2E-20 139.9 9.6 101 226-329 7-116 (157)
39 2yzq_A Putative uncharacterize 99.6 6.6E-17 2.2E-21 159.8 3.1 179 226-425 1-180 (282)
40 3t4n_C Nuclear protein SNF4; C 99.6 2E-16 6.9E-21 159.9 6.6 187 228-429 116-320 (323)
41 3ddj_A CBS domain-containing p 99.6 2.3E-16 7.8E-21 157.5 6.8 184 222-428 16-213 (296)
42 1o50_A CBS domain-containing p 99.6 1.3E-15 4.4E-20 138.2 10.0 102 222-329 12-133 (157)
43 3fv6_A YQZB protein; CBS domai 99.6 1.7E-15 5.9E-20 137.8 10.6 102 223-329 14-121 (159)
44 2yzq_A Putative uncharacterize 99.6 8.4E-16 2.9E-20 151.8 8.7 188 224-428 58-278 (282)
45 1pbj_A Hypothetical protein; s 99.6 1.3E-15 4.6E-20 131.8 8.2 99 226-329 1-103 (125)
46 1pvm_A Conserved hypothetical 99.6 1.7E-15 5.9E-20 141.2 9.4 100 226-329 9-113 (184)
47 2o16_A Acetoin utilization pro 99.6 2.5E-15 8.6E-20 137.0 9.9 102 224-329 3-116 (160)
48 1y5h_A Hypothetical protein RV 99.6 9.9E-16 3.4E-20 134.5 6.6 103 223-329 5-112 (133)
49 2j9l_A Chloride channel protei 99.6 2.1E-15 7.2E-20 139.7 8.9 106 223-329 8-146 (185)
50 2pfi_A Chloride channel protei 99.6 1.8E-15 6.2E-20 137.3 8.1 109 218-329 5-128 (164)
51 2nyc_A Nuclear protein SNF4; b 99.6 1.9E-15 6.6E-20 133.9 8.1 103 223-329 5-121 (144)
52 2uv4_A 5'-AMP-activated protei 99.6 5.1E-15 1.7E-19 133.5 8.5 101 223-329 20-131 (152)
53 1vr9_A CBS domain protein/ACT 99.5 2.1E-14 7.3E-19 137.6 12.1 99 225-329 12-110 (213)
54 2v8q_E 5'-AMP-activated protei 99.5 4E-15 1.4E-19 150.9 7.2 188 227-429 119-323 (330)
55 1zfj_A Inosine monophosphate d 99.5 1.6E-14 5.3E-19 155.6 12.0 151 185-350 53-210 (491)
56 2qrd_G Protein C1556.08C; AMPK 99.5 2.1E-15 7.1E-20 153.1 3.5 188 229-429 110-315 (334)
57 3usb_A Inosine-5'-monophosphat 99.5 2.3E-14 8E-19 154.8 11.3 151 185-350 76-233 (511)
58 3org_A CMCLC; transporter, tra 99.5 4.7E-15 1.6E-19 164.4 5.3 124 224-352 451-626 (632)
59 4fxs_A Inosine-5'-monophosphat 99.5 3.9E-15 1.3E-19 160.4 4.3 150 185-350 52-208 (496)
60 3pc3_A CG1753, isoform A; CBS, 99.5 9.3E-14 3.2E-18 150.9 9.8 102 223-329 381-487 (527)
61 1me8_A Inosine-5'-monophosphat 99.4 1.1E-14 3.8E-19 157.2 1.9 153 186-353 61-223 (503)
62 3l2b_A Probable manganase-depe 99.4 6.9E-14 2.4E-18 136.3 6.8 102 225-330 6-225 (245)
63 2cu0_A Inosine-5'-monophosphat 99.4 1.7E-14 5.7E-19 155.3 1.8 146 186-350 57-207 (486)
64 2d4z_A Chloride channel protei 99.4 1.9E-13 6.3E-18 134.7 8.5 60 222-284 9-69 (250)
65 4avf_A Inosine-5'-monophosphat 99.4 3.3E-14 1.1E-18 153.0 1.4 149 185-350 51-206 (490)
66 1vrd_A Inosine-5'-monophosphat 99.2 1.7E-12 6E-17 139.7 1.8 129 213-353 87-217 (494)
67 4af0_A Inosine-5'-monophosphat 99.2 5.4E-12 1.8E-16 134.3 1.7 127 211-349 128-256 (556)
68 1jcn_A Inosine monophosphate d 99.1 2E-11 6.8E-16 132.2 0.4 120 227-351 109-233 (514)
69 3ghd_A A cystathionine beta-sy 98.5 1.8E-07 6.3E-12 73.6 6.4 65 237-304 1-70 (70)
70 1vr9_A CBS domain protein/ACT 98.4 2.9E-08 1E-12 94.6 -0.2 104 225-333 71-175 (213)
71 3fio_A A cystathionine beta-sy 98.4 6E-07 2E-11 69.3 6.4 63 238-303 2-69 (70)
72 3org_A CMCLC; transporter, tra 98.4 3.1E-08 1.1E-12 109.7 -1.9 128 289-428 451-624 (632)
73 4fxs_A Inosine-5'-monophosphat 98.1 1.4E-06 4.6E-11 93.8 3.3 117 292-427 90-207 (496)
74 3l2b_A Probable manganase-depe 98.0 2E-06 6.9E-11 83.1 3.5 59 224-285 183-241 (245)
75 4esy_A CBS domain containing m 98.0 2.9E-06 1E-10 77.3 4.2 61 223-288 102-162 (170)
76 3kpb_A Uncharacterized protein 97.9 1.1E-05 3.6E-10 68.6 5.7 59 224-286 60-118 (122)
77 4fry_A Putative signal-transdu 97.9 6.8E-06 2.3E-10 73.4 4.5 59 223-286 75-133 (157)
78 3ghd_A A cystathionine beta-sy 97.9 1.4E-05 4.8E-10 62.6 5.7 29 301-329 2-30 (70)
79 3fv6_A YQZB protein; CBS domai 97.8 1.4E-05 4.7E-10 71.8 5.2 62 222-285 77-141 (159)
80 3fio_A A cystathionine beta-sy 97.8 2.7E-05 9.1E-10 59.8 5.7 30 300-329 1-30 (70)
81 1pbj_A Hypothetical protein; s 97.8 2.7E-05 9.3E-10 66.3 5.4 60 222-286 61-120 (125)
82 2rc3_A CBS domain; in SITU pro 97.7 2.9E-05 1E-09 67.3 5.7 59 223-286 71-129 (135)
83 4gqw_A CBS domain-containing p 97.7 1.7E-05 5.7E-10 69.8 4.0 60 223-286 82-141 (152)
84 2ef7_A Hypothetical protein ST 97.7 2.4E-05 8.2E-10 67.6 4.9 57 225-285 66-122 (133)
85 3k2v_A Putative D-arabinose 5- 97.7 3.6E-05 1.2E-09 68.2 6.1 39 291-329 28-68 (149)
86 2yzi_A Hypothetical protein PH 97.7 3.7E-05 1.3E-09 66.8 5.9 55 290-346 6-60 (138)
87 3lhh_A CBS domain protein; str 97.7 6.5E-05 2.2E-09 68.5 7.8 57 225-286 106-162 (172)
88 1pvm_A Conserved hypothetical 97.7 5.3E-05 1.8E-09 69.7 7.3 60 223-286 72-131 (184)
89 3gby_A Uncharacterized protein 97.7 2.3E-05 8E-10 67.5 4.4 56 290-348 4-59 (128)
90 3fhm_A Uncharacterized protein 97.7 4E-05 1.4E-09 69.2 6.1 61 222-287 89-149 (165)
91 3lfr_A Putative metal ION tran 97.7 4E-05 1.4E-09 66.9 5.7 59 223-286 67-125 (136)
92 3lv9_A Putative transporter; C 97.7 5.8E-05 2E-09 66.6 6.8 56 225-285 87-142 (148)
93 3oco_A Hemolysin-like protein 97.7 5.5E-05 1.9E-09 67.4 6.6 57 225-286 85-141 (153)
94 3ctu_A CBS domain protein; str 97.7 3.5E-05 1.2E-09 68.6 5.3 39 291-329 15-55 (156)
95 2rih_A Conserved protein with 97.7 7.8E-05 2.7E-09 65.1 7.2 56 225-285 70-125 (141)
96 1y5h_A Hypothetical protein RV 97.7 2.9E-05 1E-09 67.0 4.3 59 223-286 71-129 (133)
97 2o16_A Acetoin utilization pro 97.7 4.3E-05 1.5E-09 68.7 5.5 40 290-329 4-43 (160)
98 3jtf_A Magnesium and cobalt ef 97.7 4.6E-05 1.6E-09 65.8 5.5 57 224-285 67-123 (129)
99 3sl7_A CBS domain-containing p 97.7 3.4E-05 1.2E-09 70.0 4.8 61 222-286 94-154 (180)
100 1o50_A CBS domain-containing p 97.6 4.3E-05 1.5E-09 68.3 5.0 59 222-285 92-150 (157)
101 1jcn_A Inosine monophosphate d 97.6 5.3E-06 1.8E-10 89.5 -1.6 120 292-428 109-232 (514)
102 2uv4_A 5'-AMP-activated protei 97.6 8.9E-05 3E-09 65.8 6.5 59 225-285 86-148 (152)
103 2p9m_A Hypothetical protein MJ 97.6 6.4E-05 2.2E-09 65.2 5.4 40 290-329 7-46 (138)
104 3lqn_A CBS domain protein; csg 97.6 9.3E-05 3.2E-09 65.3 6.2 57 223-285 84-140 (150)
105 3i8n_A Uncharacterized protein 97.6 9.4E-05 3.2E-09 63.9 6.1 57 224-285 70-126 (130)
106 3nqr_A Magnesium and cobalt ef 97.6 6.3E-05 2.2E-09 64.7 4.9 58 224-286 67-124 (127)
107 2emq_A Hypothetical conserved 97.5 7.8E-05 2.7E-09 66.2 5.5 57 290-348 10-68 (157)
108 2pfi_A Chloride channel protei 97.5 7.9E-05 2.7E-09 66.5 5.3 40 290-329 12-51 (164)
109 1me8_A Inosine-5'-monophosphat 97.5 4.1E-05 1.4E-09 82.4 4.0 101 224-329 159-261 (503)
110 3hf7_A Uncharacterized CBS-dom 97.5 8.2E-05 2.8E-09 64.5 5.2 57 224-285 68-124 (130)
111 3k6e_A CBS domain protein; str 97.5 9.5E-05 3.2E-09 66.6 5.4 38 292-329 16-55 (156)
112 1yav_A Hypothetical protein BS 97.5 7.2E-05 2.4E-09 66.9 4.5 49 290-338 13-63 (159)
113 3kxr_A Magnesium transporter, 97.5 9.4E-05 3.2E-09 69.9 5.4 60 223-286 113-172 (205)
114 3oi8_A Uncharacterized protein 97.5 8.5E-05 2.9E-09 66.5 4.8 55 224-283 101-155 (156)
115 2nyc_A Nuclear protein SNF4; b 97.5 0.00013 4.4E-09 63.5 5.8 39 291-329 8-49 (144)
116 2d4z_A Chloride channel protei 97.4 0.00014 4.7E-09 71.2 6.2 40 290-329 12-51 (250)
117 3usb_A Inosine-5'-monophosphat 97.4 0.00022 7.5E-09 76.9 8.2 112 223-338 172-285 (511)
118 3ocm_A Putative membrane prote 97.4 0.00019 6.5E-09 65.8 6.2 56 290-347 35-93 (173)
119 2j9l_A Chloride channel protei 97.3 0.00018 6.2E-09 65.5 5.0 59 223-286 105-163 (185)
120 2yvy_A MGTE, Mg2+ transporter 97.2 0.00028 9.4E-09 69.6 4.9 61 223-287 196-256 (278)
121 2oux_A Magnesium transporter; 97.0 0.00038 1.3E-08 69.1 4.2 60 223-286 198-257 (286)
122 4avf_A Inosine-5'-monophosphat 96.9 0.00068 2.3E-08 72.6 5.0 102 224-329 145-248 (490)
123 3pc3_A CG1753, isoform A; CBS, 96.9 0.00071 2.4E-08 73.1 5.0 59 290-350 383-443 (527)
124 2zy9_A Mg2+ transporter MGTE; 96.8 0.0009 3.1E-08 71.3 5.0 60 223-286 216-275 (473)
125 1vrd_A Inosine-5'-monophosphat 96.6 0.0011 3.9E-08 70.8 4.1 101 224-327 153-255 (494)
126 2cu0_A Inosine-5'-monophosphat 96.4 0.0017 5.9E-08 69.4 4.2 104 224-337 148-256 (486)
127 4af0_A Inosine-5'-monophosphat 96.3 0.0016 5.6E-08 69.5 3.3 99 224-329 198-300 (556)
128 1zfj_A Inosine monophosphate d 95.9 0.018 6.2E-07 61.3 9.0 101 224-329 150-252 (491)
129 3lae_A UPF0053 protein HI0107; 90.9 0.053 1.8E-06 43.2 0.5 47 365-411 3-51 (81)
130 3llb_A Uncharacterized protein 90.7 0.048 1.7E-06 43.7 0.1 47 365-411 3-51 (83)
131 2rk5_A Putative hemolysin; str 90.6 0.04 1.4E-06 44.5 -0.4 48 366-413 3-53 (87)
132 2pli_A Uncharacterized protein 89.6 0.06 2.1E-06 43.9 -0.2 50 364-413 11-63 (91)
133 2oai_A Hemolysin; PFAM03471, x 89.4 0.065 2.2E-06 44.0 -0.1 50 364-413 11-66 (94)
134 2r2z_A Hemolysin; APC85144, en 89.3 0.062 2.1E-06 43.9 -0.3 47 365-411 10-58 (93)
135 2p13_A CBS domain; alpha-beta 88.6 0.087 3E-06 42.8 0.1 49 365-413 9-62 (90)
136 2pls_A CBS domain protein; APC 88.2 0.095 3.2E-06 42.1 0.1 48 366-413 4-58 (86)
137 2p4p_A Hypothetical protein HD 87.3 0.13 4.4E-06 41.4 0.3 48 366-413 4-56 (86)
138 2p3h_A Uncharacterized CBS dom 87.1 0.1 3.5E-06 43.6 -0.4 49 365-413 6-57 (101)
139 2o3g_A Putative protein; APC85 86.8 0.12 4E-06 42.2 -0.1 49 365-413 11-64 (92)
140 3ded_A Probable hemolysin; str 85.4 0.18 6.1E-06 42.9 0.2 48 364-411 28-82 (113)
141 2nqw_A CBS domain protein; PFA 78.1 0.43 1.5E-05 38.8 -0.1 47 365-413 9-65 (93)
142 3arc_L Photosystem II reaction 29.8 54 0.0019 21.6 3.2 25 27-52 11-35 (37)
143 4h33_A LMO2059 protein; bilaye 24.9 1.4E+02 0.0049 25.3 6.4 14 131-144 57-70 (137)
No 1
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.94 E-value=4.8e-27 Score=218.04 Aligned_cols=167 Identities=25% Similarity=0.468 Sum_probs=114.5
Q ss_pred cccccHHHHHHHHHHhhhhhccCCCCChhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCcee
Q 010325 184 EALFRRAQLKALVTIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRV 263 (513)
Q Consensus 184 ~~~~s~eeL~~lv~~~~~e~~~~g~L~~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~ 263 (513)
...++++||+.+++ ++.+.|.++++|++++++++++.+.+|+++|+|+.+++++++++++. ++++.|.+++++++
T Consensus 4 ~~~~t~~el~~l~~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~ 78 (172)
T 3lhh_A 4 DDNVTQEDIQAMLQ----EGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRF 78 (172)
T ss_dssp -------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEE
T ss_pred cccCCHHHHHHHHH----HHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEE
Confidence 45689999999997 44567999999999999999999999999999988999999999999 99999999999999
Q ss_pred eeeeCCCCcEEEEEEhhhhhccCCC-CcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCC
Q 010325 264 PVYSGNPKNIIGLLLVKSLLTVRPE-TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTD 342 (513)
Q Consensus 264 PV~~~~~d~ivGiV~~kDLl~~~~~-~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~ 342 (513)
||++++.++++|+|+.+|++..... ...+++++| +++++|++++++.++++.|.+++.+.+||+|
T Consensus 79 pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd------------- 144 (172)
T 3lhh_A 79 PVCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVD------------- 144 (172)
T ss_dssp EEESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEEC-------------
T ss_pred EEEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEe-------------
Confidence 9998655799999999999975432 256899998 9999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCccccccccccCCceEecCCCCCccccccccccccCCCCccccccccccccCCCccceecchHH
Q 010325 343 GKKPKLNEAKGGDCDLTAPLLSKQDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLED 422 (513)
Q Consensus 343 ~dile~i~g~~~~s~~~~p~~~~~~~~~~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g~liGIITleD 422 (513)
++|+++||||.+|
T Consensus 145 -------------------------------------------------------------------~~g~lvGiit~~D 157 (172)
T 3lhh_A 145 -------------------------------------------------------------------EYGDLKGLVTLQD 157 (172)
T ss_dssp -------------------------------------------------------------------TTSCEEEEEEHHH
T ss_pred -------------------------------------------------------------------CCCCEEEEeeHHH
Confidence 5789999999999
Q ss_pred HHHHHhcCccCCCCc
Q 010325 423 VFEELLQEEIVDETD 437 (513)
Q Consensus 423 v~eel~~~ei~de~d 437 (513)
+++++.| ++.||+|
T Consensus 158 il~~l~~-~~~de~~ 171 (172)
T 3lhh_A 158 MMDALTG-EFFQEDG 171 (172)
T ss_dssp HHHHHHT-TCC----
T ss_pred HHHHHhC-CCccccC
Confidence 9999996 9988875
No 2
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.92 E-value=2.8e-25 Score=202.69 Aligned_cols=138 Identities=22% Similarity=0.328 Sum_probs=125.8
Q ss_pred cccHHHHHHHHHHhhhhhccCCCCChhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeee
Q 010325 186 LFRRAQLKALVTIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPV 265 (513)
Q Consensus 186 ~~s~eeL~~lv~~~~~e~~~~g~L~~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV 265 (513)
.+|++||+.+++ ++.+.|.++++|+++++++++|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||
T Consensus 2 ~~t~~el~~li~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLR----QAHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHH----HHHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHH----hHHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 478999999998 44557999999999999999999999999999988999999999999 9999999999999999
Q ss_pred eeCCCCcEEEEEEhhhhhccCCC-CcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 266 YSGNPKNIIGLLLVKSLLTVRPE-TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 266 ~~~~~d~ivGiV~~kDLl~~~~~-~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
++++.++++|+|+.+|++..... ...+++++| +++++|++++++.++++.|.+++.+.+||+|
T Consensus 77 vd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd 140 (156)
T 3oi8_A 77 IGEDKDEVLGILHAKDLLKYMFNPEQFHLKSIL-RPAVFVPEGKSLTALLKEFREQRNHMAIVID 140 (156)
T ss_dssp ESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHHC-BCCCEEETTSBHHHHHHHHHHTTCCEEEEEC
T ss_pred EcCCCCcEEEEEEHHHHHHHHHcCCcccHHHHc-CCCEEECCCCCHHHHHHHHHhcCCeEEEEEC
Confidence 98764699999999999987544 456788986 5688999999999999999999999999999
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.92 E-value=3.9e-25 Score=206.15 Aligned_cols=153 Identities=21% Similarity=0.310 Sum_probs=135.6
Q ss_pred ccCCCCChhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhh
Q 010325 204 GKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLL 283 (513)
Q Consensus 204 ~~~g~L~~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl 283 (513)
.++|.++++|+++++++++|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+||+
T Consensus 14 ~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~ 92 (173)
T 3ocm_A 14 PAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLV 92 (173)
T ss_dssp ----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHH
T ss_pred HhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHH
Confidence 456999999999999999999999999999999999999999999 9999999999999999986557999999999999
Q ss_pred ccCCC-CcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCccccccCCCCCCCCccc
Q 010325 284 TVRPE-TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPL 362 (513)
Q Consensus 284 ~~~~~-~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dile~i~g~~~~s~~~~p~ 362 (513)
..... ...++. |++++++|++++++.++++.|.+++.+++||+|
T Consensus 93 ~~~~~~~~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvd--------------------------------- 137 (173)
T 3ocm_A 93 ADLITEGRVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVAD--------------------------------- 137 (173)
T ss_dssp HHHHHHSSCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEEC---------------------------------
T ss_pred HHHhcCCcchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEe---------------------------------
Confidence 75321 245676 568899999999999999999999999999999
Q ss_pred cccccccCCceEecCCCCCccccccccccccCCCCccccccccccccCCCccceecchHHHHHHHhcCccCCCCchhh
Q 010325 363 LSKQDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEIVDETDEYV 440 (513)
Q Consensus 363 ~~~~~~~~~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g~liGIITleDv~eel~~~ei~de~d~~~ 440 (513)
++|+++||||.+||++++.| ++.||+|++.
T Consensus 138 -----------------------------------------------e~g~lvGiIT~~Dil~~l~~-~i~de~~~~~ 167 (173)
T 3ocm_A 138 -----------------------------------------------EFGAIEGLVTPIDVFEAIAG-EFPDEDELPD 167 (173)
T ss_dssp -----------------------------------------------TTCCEEEEECHHHHHHHHHC-CCCCTTSCC-
T ss_pred -----------------------------------------------CCCCEEEEEeHHHHHHHHhC-cCCCccccHh
Confidence 67899999999999999996 9999988644
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.90 E-value=4.3e-24 Score=192.41 Aligned_cols=122 Identities=18% Similarity=0.362 Sum_probs=98.9
Q ss_pred CCCCChhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhcc
Q 010325 206 GGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTV 285 (513)
Q Consensus 206 ~g~L~~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~ 285 (513)
+|.++++|++++++++++.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|++..
T Consensus 3 ~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~ 81 (148)
T 3lv9_A 3 AGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQ 81 (148)
T ss_dssp ---------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHH
T ss_pred CCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHH
Confidence 5889999999999999999999999999999999999999999 999999999999999998654799999999999875
Q ss_pred CCCC-cccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 286 RPET-ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 286 ~~~~-~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
.... ..+++++| +++++|++++++.++++.|.+++.+.+||+|
T Consensus 82 ~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 125 (148)
T 3lv9_A 82 KINENKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVD 125 (148)
T ss_dssp HHHHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HhcCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEe
Confidence 3322 57899998 9999999999999999999999999999999
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.89 E-value=5.6e-24 Score=193.07 Aligned_cols=148 Identities=28% Similarity=0.437 Sum_probs=123.5
Q ss_pred CCChhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeee-eCCCCcEEEEEEhhhhhccC
Q 010325 208 ELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVY-SGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 208 ~L~~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~-~~~~d~ivGiV~~kDLl~~~ 286 (513)
.++++|++++++++++.+.+|+++|+|+++++++++++++. ++++.|.+++++++||+ +++.++++|+|+.+|++...
T Consensus 2 ~l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~ 80 (153)
T 3oco_A 2 NADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQA 80 (153)
T ss_dssp ------CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHH
T ss_pred CcCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHH
Confidence 36788999999999999999999999988999999999999 99999999999999999 55447999999999998653
Q ss_pred CC-CcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCccccccCCCCCCCCcccccc
Q 010325 287 PE-TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSK 365 (513)
Q Consensus 287 ~~-~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dile~i~g~~~~s~~~~p~~~~ 365 (513)
.. ...+++++| +++++|++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd------------------------------------ 123 (153)
T 3oco_A 81 RIDDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVID------------------------------------ 123 (153)
T ss_dssp HHHTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEEC------------------------------------
T ss_pred hcCCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEe------------------------------------
Confidence 22 256899998 9999999999999999999999999999999
Q ss_pred ccccCCceEecCCCCCccccccccccccCCCCccccccccccccCCCccceecchHHHHHHHhcCccCCCCch
Q 010325 366 QDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEIVDETDE 438 (513)
Q Consensus 366 ~~~~~~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g~liGIITleDv~eel~~~ei~de~d~ 438 (513)
++|+++||||.+|+++++.| ++.||+|+
T Consensus 124 --------------------------------------------~~g~~vGivt~~dil~~l~~-~~~de~~~ 151 (153)
T 3oco_A 124 --------------------------------------------EYGGTSGIITDKDVYEELFG-NLRDEQDD 151 (153)
T ss_dssp --------------------------------------------TTSCEEEEECHHHHHHHHHC---------
T ss_pred --------------------------------------------CCCCEEEEeeHHHHHHHHhc-cCCCcccC
Confidence 57899999999999999996 89998874
No 6
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.87 E-value=4.6e-22 Score=190.49 Aligned_cols=179 Identities=9% Similarity=0.094 Sum_probs=133.9
Q ss_pred cccHHHHHHHHHHhhhhhccCCCCChhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhc---CCce
Q 010325 186 LFRRAQLKALVTIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILAR---GHSR 262 (513)
Q Consensus 186 ~~s~eeL~~lv~~~~~e~~~~g~L~~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~---~~sr 262 (513)
.+.+++.+.++. .++++|++++++++.|.+.+|+++|++ +++++++++++. ++++.++++ +++.
T Consensus 24 ~l~~~~~~~~l~----------~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~ 90 (205)
T 3kxr_A 24 YLPESFTDRALA----------QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDN 90 (205)
T ss_dssp TSCHHHHHHHHH----------HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCE
T ss_pred hCCHHHHHHHHH----------cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeE
Confidence 345666666663 478999999999999999999999997 899999999999 999999987 7899
Q ss_pred eeeeeCCCCcEEEEEEhhhhhccCCCCcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCC
Q 010325 263 VPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTD 342 (513)
Q Consensus 263 ~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~ 342 (513)
+||++++ ++++|+|+.+||+... ...+++++|.+++++|++++++.++++.|++++.+.+||||
T Consensus 91 ~~Vvd~~-~~lvGivt~~dll~~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD------------- 154 (205)
T 3kxr_A 91 LFIVDEA-DKYLGTVRRYDIFKHE--PHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVID------------- 154 (205)
T ss_dssp EEEECTT-CBEEEEEEHHHHTTSC--TTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC-------------
T ss_pred EEEEcCC-CeEEEEEEHHHHHhCC--CcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc-------------
Confidence 9999864 8999999999998753 35789999888999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCccccccccccCCceEecCCCCCccccccccccccCCCCccccccccccccCCCccceecchHH
Q 010325 343 GKKPKLNEAKGGDCDLTAPLLSKQDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLED 422 (513)
Q Consensus 343 ~dile~i~g~~~~s~~~~p~~~~~~~~~~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g~liGIITleD 422 (513)
++|+++||||.+|
T Consensus 155 -------------------------------------------------------------------~~g~lvGiIT~~D 167 (205)
T 3kxr_A 155 -------------------------------------------------------------------DAGELIGRVTLRA 167 (205)
T ss_dssp -------------------------------------------------------------------TTSBEEEEEEHHH
T ss_pred -------------------------------------------------------------------CCCeEEEEEEHHH
Confidence 6789999999999
Q ss_pred HHHHHhcCccCCCCchhhhhHHHHHHHhHHHhhhhccCC
Q 010325 423 VFEELLQEEIVDETDEYVDVHKRIRVAAAAAASSVARAP 461 (513)
Q Consensus 423 v~eel~~~ei~de~d~~~~~~~~~~~~~~~~~~~~~r~~ 461 (513)
|++.+.+ |..++.-...++.......+....+..+|+|
T Consensus 168 il~~i~~-e~~ed~~~~~g~~~~~~~~~~~~~~~k~R~~ 205 (205)
T 3kxr_A 168 ATALVRE-HYEAQLMATAGMDESDDLFAPILKGAQRRAV 205 (205)
T ss_dssp HHHHHHH-HHC----------------------------
T ss_pred HHHHHHH-HHHHHHHHhcCCCcccccCCCHHHHHHhhCC
Confidence 9999874 5544443333433222244455556666765
No 7
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.85 E-value=9e-22 Score=175.13 Aligned_cols=131 Identities=31% Similarity=0.496 Sum_probs=109.4
Q ss_pred ccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCC---CCcccccccccccc
Q 010325 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP---ETETPVSAVSIRRI 301 (513)
Q Consensus 225 ~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~---~~~~~v~dim~~~~ 301 (513)
+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+||+.... ....+++++| +++
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m-~~~ 79 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLL-RPA 79 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTC-BCC
T ss_pred CCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHc-CCC
Confidence 678999999988999999999999 99999999999999999875479999999999997643 2346789986 568
Q ss_pred eeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCccccccCCCCCCCCccccccccccCCceEecCCCCC
Q 010325 302 PRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKTESVVVDVDRPL 381 (513)
Q Consensus 302 ~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dile~i~g~~~~s~~~~p~~~~~~~~~~~~~vd~~~~i 381 (513)
++|++++++.++++.|.+++.+.+||+|
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd---------------------------------------------------- 107 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRANHNHMAIVID---------------------------------------------------- 107 (136)
T ss_dssp CEEETTCBHHHHHHHHHHHTCCEEEEEC----------------------------------------------------
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEe----------------------------------------------------
Confidence 8999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccccccccCCCccceecchHHHHHHHhcCccCCCCch
Q 010325 382 SSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEIVDETDE 438 (513)
Q Consensus 382 ~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g~liGIITleDv~eel~~~ei~de~d~ 438 (513)
++|+++||||.+|+++++.| |+.||+|+
T Consensus 108 ----------------------------~~g~lvGiit~~Dil~~l~~-~~~de~~~ 135 (136)
T 3lfr_A 108 ----------------------------EYGGVAGLVTIEDVLEQIVG-DIEDEHDV 135 (136)
T ss_dssp ----------------------------TTSCEEEEEEHHHHHTTC-----------
T ss_pred ----------------------------CCCCEEEEEEHHHHHHHHhC-CCcCcccC
Confidence 67899999999999999996 99998874
No 8
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.85 E-value=3e-21 Score=170.00 Aligned_cols=105 Identities=31% Similarity=0.490 Sum_probs=94.8
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCCcccccccccccce
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIP 302 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~dim~~~~~ 302 (513)
..+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|++........+++++| ++++
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~m-~~~~ 79 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSLV-RPAV 79 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGGC-BCCC
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHHh-CCCe
Confidence 46789999999998999999999999 999999999999999998755799999999999987555567899986 6788
Q ss_pred eeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 303 RVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 303 ~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
++++++++.++++.|.+++.+.+||+|
T Consensus 80 ~v~~~~~l~~~~~~m~~~~~~~~pVvd 106 (129)
T 3jtf_A 80 FIPEVKRLNVLLREFRASRNHLAIVID 106 (129)
T ss_dssp EEETTCBHHHHHHHHHTSSCCEEEEEC
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEe
Confidence 999999999999999999999999999
No 9
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.84 E-value=2.6e-21 Score=170.93 Aligned_cols=103 Identities=20% Similarity=0.357 Sum_probs=92.4
Q ss_pred ccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCC----ccccccccccc
Q 010325 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPET----ETPVSAVSIRR 300 (513)
Q Consensus 225 ~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~----~~~v~dim~~~ 300 (513)
+++|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|++....+. ..+++++| ++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m-~~ 78 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAA-DE 78 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS-BC
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhc-cC
Confidence 368999999988999999999999 9999999999999999976558999999999998765432 24678876 88
Q ss_pred ceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 301 ~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
+++|++++++.++++.|.+++.+.+||+|
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 107 (130)
T 3hf7_A 79 IYFVPEGTPLSTQLVKFQRNKKKVGLVVD 107 (130)
T ss_dssp CCEEETTCBHHHHHHHHHHHCCCEEEEEC
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEc
Confidence 89999999999999999999999999999
No 10
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.83 E-value=6.1e-21 Score=174.71 Aligned_cols=103 Identities=19% Similarity=0.292 Sum_probs=90.4
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC--------Cccccc
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE--------TETPVS 294 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~--------~~~~v~ 294 (513)
|-..+++++|+|+.++++++++++++ ++++.|.+++++++||++++ ++++|+|+.+|++.+... ...+++
T Consensus 12 ~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd~~-~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~ 89 (156)
T 3k6e_A 12 FLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIMADTDIV 89 (156)
T ss_dssp HHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGG
T ss_pred HhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEecchhhhhhhcccccccccccCHH
Confidence 44568999999999999999999999 99999999999999999865 899999999999764211 246789
Q ss_pred ccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 295 AVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 295 dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
++|.++++++++++++.++++.|.+++ ++||||
T Consensus 90 ~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd 122 (156)
T 3k6e_A 90 HMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD 122 (156)
T ss_dssp GTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEEC
T ss_pred HhhcCCceecccccHHHHHHHHHHHcC--CeEEEe
Confidence 999999999999999999999998775 589999
No 11
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.82 E-value=7.9e-21 Score=167.37 Aligned_cols=106 Identities=25% Similarity=0.350 Sum_probs=91.8
Q ss_pred cCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC--Ccccccccccc
Q 010325 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE--TETPVSAVSIR 299 (513)
Q Consensus 222 ~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~--~~~~v~dim~~ 299 (513)
+|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|++..... ...+++++| +
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m-~ 79 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVM-R 79 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHS-E
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHh-c
Confidence 478899999999988999999999999 999999999999999998755799999999999875422 246788987 7
Q ss_pred cceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 300 RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 300 ~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
++.++++++++.++++.|.+++.+.+||+|
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 109 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVD 109 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEEC
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEc
Confidence 788999999999999999999999999999
No 12
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.81 E-value=3.8e-20 Score=162.28 Aligned_cols=104 Identities=30% Similarity=0.466 Sum_probs=92.0
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCC--CCcccccccccccc
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP--ETETPVSAVSIRRI 301 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~--~~~~~v~dim~~~~ 301 (513)
++.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|++.... ....+++++| +++
T Consensus 1 ~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m-~~~ 78 (127)
T 3nqr_A 1 ADQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVL-RTA 78 (127)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHC-BCC
T ss_pred CCcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHc-CCC
Confidence 3678999999987899999999999 99999999999999999865579999999999997643 2346788986 668
Q ss_pred eeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 302 PRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 302 ~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
.++++++++.++++.|.+++.+.+||+|
T Consensus 79 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd 106 (127)
T 3nqr_A 79 VVVPESKRVDRMLKEFRSQRYHMAIVID 106 (127)
T ss_dssp CEEETTCBHHHHHHHHHHTTCCEEEEEC
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEe
Confidence 8999999999999999999999999999
No 13
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.79 E-value=2.9e-20 Score=189.01 Aligned_cols=211 Identities=10% Similarity=0.125 Sum_probs=159.8
Q ss_pred CCCChhHHHHHHHhhcC-cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhcc
Q 010325 207 GELTHDETTIISGALDL-TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTV 285 (513)
Q Consensus 207 g~L~~~E~~~I~~vl~l-~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~ 285 (513)
+.++++|.++++++++| ++.+|+|+|+|+.++++++.+.++. ++++.|.+++++++||++++.++++|+|+.+|++..
T Consensus 2 ~~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~ 80 (334)
T 2qrd_G 2 MDVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNV 80 (334)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHH
Confidence 34567899999999995 5599999999999999999999999 999999999999999999766899999999999863
Q ss_pred C--------CCC------cccccc-------cccccc--eeeCCCCCHHHHHHHHHhCCceEEEEEecCCC-----cccC
Q 010325 286 R--------PET------ETPVSA-------VSIRRI--PRVPSDMPLYDILNEFQKGSSHMAAVVKAKGK-----SKTL 337 (513)
Q Consensus 286 ~--------~~~------~~~v~d-------im~~~~--~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~-----~~Gi 337 (513)
. ... ..++.. +|.+++ +++++++++.++++.|.+++.+.+||+|++|+ +.|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Gi 160 (334)
T 2qrd_G 81 IKYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSV 160 (334)
T ss_dssp HHHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEE
T ss_pred HHHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEE
Confidence 2 111 222222 356777 89999999999999999999999999999986 9999
Q ss_pred CCCCCCCCccccccCCCCCC-CCccccccc-cccCCceEecCCCCCccccccccccccCCCCccccccccccccCCCccc
Q 010325 338 PPMTDGKKPKLNEAKGGDCD-LTAPLLSKQ-DEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVI 415 (513)
Q Consensus 338 v~~T~~dile~i~g~~~~s~-~~~p~~~~~-~~~~~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g~li 415 (513)
+ |.+|+++.+.+...... ...+..... .+....+.++.+.++.+..+.+.... ...+++.. ++|+++
T Consensus 161 v--t~~dl~~~~~~~~~~~~~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~------~~~~~Vvd---~~~~~~ 229 (334)
T 2qrd_G 161 L--TQYRILKFISMNCKETAMLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKN------ISAVPIVN---SEGTLL 229 (334)
T ss_dssp E--EHHHHHHHHHHHCGGGGGCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHT------CSEEEEEC---TTCBEE
T ss_pred e--eHHHHHHHHHhhccchhhhhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcC------CcEEEEEc---CCCcEE
Confidence 9 99999988764321110 111211111 13455678888888877766655321 12233320 468999
Q ss_pred eecchHHHHHHHhc
Q 010325 416 GIITLEDVFEELLQ 429 (513)
Q Consensus 416 GIITleDv~eel~~ 429 (513)
|+||..|+++.+.+
T Consensus 230 Giit~~dl~~~~~~ 243 (334)
T 2qrd_G 230 NVYESVDVMHLIQD 243 (334)
T ss_dssp EEEETHHHHHHHTT
T ss_pred EEEEHHHHHHHhhc
Confidence 99999999998764
No 14
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.78 E-value=5.2e-19 Score=176.63 Aligned_cols=117 Identities=15% Similarity=0.155 Sum_probs=107.9
Q ss_pred CCCChhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhc-----CCceeeeeeCCCCcEEEEEEhhh
Q 010325 207 GELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILAR-----GHSRVPVYSGNPKNIIGLLLVKS 281 (513)
Q Consensus 207 g~L~~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~-----~~sr~PV~~~~~d~ivGiV~~kD 281 (513)
+.++.+++..+.+++.+.+.+|+++|+| +++++++++++. ++++.++++ +++++||++++ ++++|+|+.+|
T Consensus 116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~d 191 (278)
T 2yvy_A 116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRD 191 (278)
T ss_dssp HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHTTTCSCSSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHccCCccceeEEEEECCC-CCEEEEEEHHH
Confidence 4678899999999999999999999997 899999999999 999999987 78999999865 89999999999
Q ss_pred hhccCCCCcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 282 LLTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 282 Ll~~~~~~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
++... ...+++++|.+++++|++++++.++++.|++++.+.+||||
T Consensus 192 ll~~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 237 (278)
T 2yvy_A 192 LIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD 237 (278)
T ss_dssp HHHSC--TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HhcCC--CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEe
Confidence 99753 35789999889999999999999999999999999999999
No 15
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.78 E-value=5.2e-19 Score=163.17 Aligned_cols=112 Identities=16% Similarity=0.256 Sum_probs=96.9
Q ss_pred hHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC---
Q 010325 212 DETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE--- 288 (513)
Q Consensus 212 ~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~--- 288 (513)
.+++.+.+. +.+++|+|+|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++.....
T Consensus 6 ~~~~~~~~~--l~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~ 79 (170)
T 4esy_A 6 ARRRAIARA--IRQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWI 79 (170)
T ss_dssp HHHHHHHHH--HHTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTH
T ss_pred HHHHHHHHH--HcCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhccc
Confidence 344455554 468899999996 899999999999 99999999999999999875 899999999999864321
Q ss_pred -----------------------CcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 289 -----------------------TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 289 -----------------------~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
...+++++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd 143 (170)
T 4esy_A 80 YEASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ 143 (170)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE
T ss_pred cchhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE
Confidence 12468899999999999999999999999999999999998
No 16
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.76 E-value=2.8e-20 Score=188.98 Aligned_cols=211 Identities=13% Similarity=0.210 Sum_probs=155.6
Q ss_pred cCCCCChhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhc
Q 010325 205 KGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLT 284 (513)
Q Consensus 205 ~~g~L~~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~ 284 (513)
+.|.+.+.+.+.+++. |.+.+|+|+|+|+.++++++.++++. ++++.|.+++++++||++++.++++|+++.+|++.
T Consensus 16 ~~~~~~~~~~~~~~~~--l~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~ 92 (330)
T 2v8q_E 16 HSQETPESNSSVYTTF--MKSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFIN 92 (330)
T ss_dssp -------CCSCHHHHH--HHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHH
T ss_pred HhhhccchhhHHHHHH--HHcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHH
Confidence 4567777777778887 56889999999999999999999999 99999999999999999987679999999999985
Q ss_pred cCCC------------Ccc-------cccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEec-CCCcccCCCCCCCC
Q 010325 285 VRPE------------TET-------PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKA-KGKSKTLPPMTDGK 344 (513)
Q Consensus 285 ~~~~------------~~~-------~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE-~G~~~Giv~~T~~d 344 (513)
.... ... .+.++|.+++++|++++++.++++.|.+++.+.+||+|+ +|+++|++ |.+|
T Consensus 93 ~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Giv--t~~d 170 (330)
T 2v8q_E 93 ILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYIL--THKR 170 (330)
T ss_dssp HHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEE--CHHH
T ss_pred HHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEE--cHHH
Confidence 3210 011 124567788999999999999999999999999999999 99999999 9999
Q ss_pred CccccccCCCCCC----CCcccccccccc-CCceEecCCCCCccccccccccccCCCCccccccccccccCCCccceecc
Q 010325 345 KPKLNEAKGGDCD----LTAPLLSKQDEK-TESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIIT 419 (513)
Q Consensus 345 ile~i~g~~~~s~----~~~p~~~~~~~~-~~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g~liGIIT 419 (513)
+++.+.+...+.. .+.+.....-.. ...+.++.+.++.+..+.+.... ...+++.. ++|+++|+||
T Consensus 171 l~~~~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~------~~~~~Vvd---~~~~l~Giit 241 (330)
T 2v8q_E 171 ILKFLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHR------VSALPVVD---EKGRVVDIYS 241 (330)
T ss_dssp HHHHHHHHSCSSSCCGGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHC------CSEEEEEC---TTSBEEEEEE
T ss_pred HHHHHHHHhhccCchhhhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcC------CCeEEEEC---CCCcEEEEEE
Confidence 9988754332211 111111111111 45678888888877766655321 22334320 3689999999
Q ss_pred hHHHHHHHhc
Q 010325 420 LEDVFEELLQ 429 (513)
Q Consensus 420 leDv~eel~~ 429 (513)
..|+++.+.+
T Consensus 242 ~~dl~~~~~~ 251 (330)
T 2v8q_E 242 KFDVINLAAE 251 (330)
T ss_dssp GGGTGGGGGS
T ss_pred HHHHHHHHhc
Confidence 9999988763
No 17
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.76 E-value=2.5e-18 Score=184.42 Aligned_cols=134 Identities=14% Similarity=0.141 Sum_probs=119.1
Q ss_pred cccHHHHHHHHHHhhhhhccC---------CCCChhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHH
Q 010325 186 LFRRAQLKALVTIHSQEAGKG---------GELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKIL 256 (513)
Q Consensus 186 ~~s~eeL~~lv~~~~~e~~~~---------g~L~~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~ 256 (513)
.++++|+..+++. ..+. +.++++|++++++++++++.+|+++|++ ++++++++++++ ++++.++
T Consensus 110 ~l~~dd~~~ll~~----l~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~ 182 (473)
T 2zy9_A 110 ELSLDDLADALQA----VRKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 182 (473)
T ss_dssp HSCHHHHHHHHHH----HHHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHH
T ss_pred hCCHHHHHHHHHh----CCHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHH
Confidence 4667788888763 2233 6899999999999999999999999997 899999999999 9999999
Q ss_pred hc-----CCceeeeeeCCCCcEEEEEEhhhhhccCCCCcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 257 AR-----GHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 257 ~~-----~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
++ +++++||++++ ++++|+|+.+|++... .+.+++++|.+++++|++++++.++++.|++++.+.+||||
T Consensus 183 ~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~~--~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVD 257 (473)
T 2zy9_A 183 RAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD 257 (473)
T ss_dssp HHGGGCSEEEEEEEECTT-SBEEEEEEHHHHHHSC--TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hccCCcCceeEEEEECCC-CcEEEEEEHHHHhcCC--CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEc
Confidence 87 47999999875 8999999999999753 45789999888999999999999999999999999999999
No 18
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.76 E-value=5.5e-20 Score=186.11 Aligned_cols=213 Identities=11% Similarity=0.156 Sum_probs=162.0
Q ss_pred cCCCCChhHHHHHHHhhcC-cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhh
Q 010325 205 KGGELTHDETTIISGALDL-TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLL 283 (513)
Q Consensus 205 ~~g~L~~~E~~~I~~vl~l-~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl 283 (513)
+.+.++++|+++++++++| .+.+|+|+|+|+.++++++.+.++. ++++.|.+++++++||++++.++++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~ 86 (323)
T 3t4n_C 8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFI 86 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHH
Confidence 3466789999999999999 9999999999999999999999999 9999999999999999998767999999999998
Q ss_pred ccCC-----CC---------cccccc------cccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCC-----cccCC
Q 010325 284 TVRP-----ET---------ETPVSA------VSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGK-----SKTLP 338 (513)
Q Consensus 284 ~~~~-----~~---------~~~v~d------im~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~-----~~Giv 338 (513)
.... .. ...+.+ +|.++++++++++++.++++.|.+++.+.+||+|++|. +.|++
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Giv 166 (323)
T 3t4n_C 87 NVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVL 166 (323)
T ss_dssp HHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEE
T ss_pred HHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEe
Confidence 6321 00 012223 33577889999999999999999999999999999987 99999
Q ss_pred CCCCCCCccccccCCCCCC-CCcccccccc-ccCCceEecCCCCCccccccccccccCCCCccccccccccccCCCccce
Q 010325 339 PMTDGKKPKLNEAKGGDCD-LTAPLLSKQD-EKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIG 416 (513)
Q Consensus 339 ~~T~~dile~i~g~~~~s~-~~~p~~~~~~-~~~~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g~liG 416 (513)
|.+|+++.+.+...... ...+...... +....+.++.+.++.+..+.+...- +..+++.. ++|+++|
T Consensus 167 --t~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~------~~~~pVvd---~~~~~~G 235 (323)
T 3t4n_C 167 --TQYRILKFVALNCRETHFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGR------VSSVPIID---ENGYLIN 235 (323)
T ss_dssp --EHHHHHHHHHHHCGGGGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHT------CSEEEEEC---TTCBEEE
T ss_pred --cHHHHHHHHHhcCCchhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcC------CCEEEEEC---CCCeEEE
Confidence 99999988764332211 1112222211 2356678888988877777665321 22233310 4689999
Q ss_pred ecchHHHHHHHhc
Q 010325 417 IITLEDVFEELLQ 429 (513)
Q Consensus 417 IITleDv~eel~~ 429 (513)
+||..|+++.+.+
T Consensus 236 iit~~dl~~~~~~ 248 (323)
T 3t4n_C 236 VYEAYDVLGLIKG 248 (323)
T ss_dssp EEETTHHHHHHHT
T ss_pred EEeHHHHHHHHhh
Confidence 9999999998764
No 19
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.72 E-value=1.2e-17 Score=167.68 Aligned_cols=117 Identities=18% Similarity=0.193 Sum_probs=107.7
Q ss_pred CCCChhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhc-----CCceeeeeeCCCCcEEEEEEhhh
Q 010325 207 GELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILAR-----GHSRVPVYSGNPKNIIGLLLVKS 281 (513)
Q Consensus 207 g~L~~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~-----~~sr~PV~~~~~d~ivGiV~~kD 281 (513)
..++.+|+..+++++.+.+.+|+++|++ ++++++.++++. ++++.|+++ +++++||++++ ++++|+|+.+|
T Consensus 118 ~~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~~d 193 (286)
T 2oux_A 118 SLLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISLRD 193 (286)
T ss_dssp HTSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEHHH
Confidence 3678899999999999999999999997 899999999999 999999987 88999999865 89999999999
Q ss_pred hhccCCCCcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 282 LLTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 282 Ll~~~~~~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
++... ...+++++|.+++++|++++++.++++.|.+++.+.+||||
T Consensus 194 ll~~~--~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd 239 (286)
T 2oux_A 194 LIVND--DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTD 239 (286)
T ss_dssp HTTSC--TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHcCC--CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEc
Confidence 98753 35789999889999999999999999999999999999999
No 20
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.71 E-value=1.3e-18 Score=173.83 Aligned_cols=217 Identities=15% Similarity=0.163 Sum_probs=164.3
Q ss_pred ccccHHHHHHHHHHhhhhhccCCCCChhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceee
Q 010325 185 ALFRRAQLKALVTIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVP 264 (513)
Q Consensus 185 ~~~s~eeL~~lv~~~~~e~~~~g~L~~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~P 264 (513)
..+|.+|+...+. . +. ...+...+.+++.+.+|+++|++ +++++++++++. ++++.|.+++++++|
T Consensus 63 GivT~~Di~~~~~----~----~~---~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lp 128 (296)
T 3ddj_A 63 GLLTTRDLLSTVE----S----YC---KDSCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLP 128 (296)
T ss_dssp EEEEHHHHHGGGT----T----CC------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEE
T ss_pred EEEeHHHHHHHhc----c----cc---cccccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEE
Confidence 3578888877663 1 10 01334556667778999999997 788999999998 999999999999999
Q ss_pred eeeCCCCcEEEEEEhhhhhccCCC--CcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCC
Q 010325 265 VYSGNPKNIIGLLLVKSLLTVRPE--TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTD 342 (513)
Q Consensus 265 V~~~~~d~ivGiV~~kDLl~~~~~--~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~ 342 (513)
|++++ ++++|+++.+|++..... ...++.++|.++++++++++++.++++.|.+++.+.+||+|++|.++|++ |.
T Consensus 129 Vvd~~-~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Giv--t~ 205 (296)
T 3ddj_A 129 VVDIN-DKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIV--TV 205 (296)
T ss_dssp EECTT-SCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEE--EH
T ss_pred EEcCC-CcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEE--EH
Confidence 99765 899999999999875322 34688999889999999999999999999999999999999999999999 99
Q ss_pred CCCccccccCCCCC----CCCccccccccccCCceEecCCCCCccccccccccccCCCCccccccccccccCCCccceec
Q 010325 343 GKKPKLNEAKGGDC----DLTAPLLSKQDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGII 418 (513)
Q Consensus 343 ~dile~i~g~~~~s----~~~~p~~~~~~~~~~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g~liGII 418 (513)
+|+++.+...+..- ....+. ...+....+.++.+.++.+..+.+...- ++.+++.. ++|+++|||
T Consensus 206 ~dl~~~~~~~~~~~~~~~~~~~~v--~~~m~~~~~~v~~~~~l~~a~~~m~~~~------~~~l~Vvd---~~g~~~Gii 274 (296)
T 3ddj_A 206 VNAIKQLAKAVDKLDPDYFYGKVV--KDVMVTNLVTIDELASVNRAAAEMIVKR------IGSLLILN---KDNTIRGII 274 (296)
T ss_dssp HHHHHHHHHHHHHTCTHHHHTCBH--HHHSBCCCCBCCTTSBHHHHHHHHHHHT------CSEEEEEC---TTSCEEEEE
T ss_pred HHHHHHHHHHHhhcChhhhcCcCH--HHHhCCCCeEECCCCcHHHHHHHHHHcC------CCEEEEEC---CCCeEEEEE
Confidence 99998876222110 001111 1223346678999999888777665432 12233310 478999999
Q ss_pred chHHHHHHHhc
Q 010325 419 TLEDVFEELLQ 429 (513)
Q Consensus 419 TleDv~eel~~ 429 (513)
|.+||++.+.+
T Consensus 275 t~~Dil~~l~~ 285 (296)
T 3ddj_A 275 TERDLLIALHH 285 (296)
T ss_dssp EHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 99999999884
No 21
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.70 E-value=5.5e-17 Score=146.65 Aligned_cols=109 Identities=18% Similarity=0.224 Sum_probs=91.3
Q ss_pred HHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC--------
Q 010325 217 ISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-------- 288 (513)
Q Consensus 217 I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~-------- 288 (513)
.++...+.+.+|+++|+|+.++++++++.++. ++++.|.+++++++||++++ ++++|+|+.+|++.....
T Consensus 2 ~~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~ 79 (157)
T 2emq_A 2 TWEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDTS-YKLHGLISMTMMMDAILGLERIEFER 79 (157)
T ss_dssp --------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECTT-CCEEEEEEHHHHHHHSBCSSSBCGGG
T ss_pred chhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcCC-CCEEEEeeHHHHHHHHhcccccchHH
Confidence 34566788999999999877899999999998 99999999999999999864 789999999999876432
Q ss_pred -CcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 289 -TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 289 -~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
...++.++|.++++++++++++.++++.|.+++. +||+|
T Consensus 80 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd 119 (157)
T 2emq_A 80 LETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEN 119 (157)
T ss_dssp GGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEEC
T ss_pred hcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEc
Confidence 2467899988899999999999999999999986 89999
No 22
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.69 E-value=4.9e-17 Score=145.38 Aligned_cols=104 Identities=19% Similarity=0.173 Sum_probs=92.4
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCC----------------
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP---------------- 287 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~---------------- 287 (513)
...+|+++|+|+.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++....
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~ 80 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLS 80 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----CCHHHHHHHTC--
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCcccchHHHHHHHH
Confidence 4678999999988899999999999 99999999999999999865 79999999999985421
Q ss_pred -CCcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 288 -ETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 288 -~~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
....++.++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd 123 (152)
T 4gqw_A 81 KTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVD 123 (152)
T ss_dssp ---CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEEC
T ss_pred HhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEEC
Confidence 123678999888889999999999999999999999999999
No 23
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.69 E-value=1.8e-17 Score=150.02 Aligned_cols=108 Identities=19% Similarity=0.260 Sum_probs=94.4
Q ss_pred HHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC--------C
Q 010325 218 SGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE--------T 289 (513)
Q Consensus 218 ~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~--------~ 289 (513)
++..++...+++++|+|+.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++..... .
T Consensus 7 ~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~ 84 (156)
T 3ctu_A 7 KEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIMA 84 (156)
T ss_dssp HHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHT
T ss_pred HHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECCC-CEEEEEEcHHHHHHHHHhccccccccc
Confidence 4455677788999999999999999999999 99999999999999999865 899999999999865321 1
Q ss_pred cccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 290 ~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
..+++++|.++++++++++++.++++.|.+++ .+||+|
T Consensus 85 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd 122 (156)
T 3ctu_A 85 DTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD 122 (156)
T ss_dssp TSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEEC
T ss_pred cCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEc
Confidence 46799998889999999999999999999886 599999
No 24
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.68 E-value=1.6e-18 Score=170.74 Aligned_cols=218 Identities=15% Similarity=0.172 Sum_probs=158.1
Q ss_pred ccccHHHHHHHHHHhhhhhccCCCCChhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceee
Q 010325 185 ALFRRAQLKALVTIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVP 264 (513)
Q Consensus 185 ~~~s~eeL~~lv~~~~~e~~~~g~L~~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~P 264 (513)
..++.+|+..++.. ....+.++..+ ..+++...+.+|+++|++ ++++++.++++. ++++.|.+++++++|
T Consensus 50 Givt~~di~~~~~~----~~~~~~~~~~~---~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~ 119 (280)
T 3kh5_A 50 GIITSMDIVDFMGG----GSKYNLIREKH---ERNFLAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAP 119 (280)
T ss_dssp EEEEHHHHHHHTTT----SGGGHHHHTTS---TTCHHHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEE
T ss_pred EEEEHHHHHHHhcc----cchhhhhhhcc---ccchhHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEE
Confidence 45788998887631 11111111111 223333447899999997 888999999998 999999999999999
Q ss_pred eeeCCCCcEEEEEEhhhhhccCCC---CcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCC
Q 010325 265 VYSGNPKNIIGLLLVKSLLTVRPE---TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMT 341 (513)
Q Consensus 265 V~~~~~d~ivGiV~~kDLl~~~~~---~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T 341 (513)
|++++ ++++|+++.+|++..... ...++.++|.+++.++++++++.++++.|.+++.+.+||+ ++|.+.|++ |
T Consensus 120 Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Giv--t 195 (280)
T 3kh5_A 120 IVNDE-NQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGII--T 195 (280)
T ss_dssp EECTT-CBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEE--E
T ss_pred EEcCC-CEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEE--E
Confidence 99865 899999999999864321 2347899988899999999999999999999999999999 799999999 9
Q ss_pred CCCCccccccCCCCC---------CCCccccccccccCCceEecCCCCCccccccccccccCCCCccccccccccccCCC
Q 010325 342 DGKKPKLNEAKGGDC---------DLTAPLLSKQDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDG 412 (513)
Q Consensus 342 ~~dile~i~g~~~~s---------~~~~p~~~~~~~~~~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g 412 (513)
.+|+++.+....... ..+.|.. .-+....+.++.+.++.+..+.+...- ++.+++.. ++|
T Consensus 196 ~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~m~~~~~~v~~~~~l~~a~~~m~~~~------~~~l~Vvd---~~g 264 (280)
T 3kh5_A 196 STDFIKLLGSDWAFNHMQTGNVREITNVRME--EIMKRDVITAKEGDKLKKIAEIMVTND------IGALPVVD---ENL 264 (280)
T ss_dssp HHHHHHHHTSHHHHHHHHSCCTHHHHHCBHH--HHSBSSCCCBCTTCBHHHHHHHHHHHT------CCEEEEEC---TTC
T ss_pred HHHHHHHHhhhhhhhhhcccchhhhhCCcHH--HHhcCCCEEECCCCCHHHHHHHHHHCC------CCEEEEEC---CCC
Confidence 999998875321100 0111111 123356678899998887777665432 22233310 457
Q ss_pred ccceecchHHHHHHH
Q 010325 413 EVIGIITLEDVFEEL 427 (513)
Q Consensus 413 ~liGIITleDv~eel 427 (513)
+++|+||.+||++.+
T Consensus 265 ~~~Givt~~dil~~l 279 (280)
T 3kh5_A 265 RIKGIITEKDVLKYF 279 (280)
T ss_dssp BEEEEEEHHHHGGGG
T ss_pred eEEEEEeHHHHHHhh
Confidence 999999999999765
No 25
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.68 E-value=2.4e-17 Score=162.33 Aligned_cols=180 Identities=13% Similarity=0.188 Sum_probs=142.9
Q ss_pred ccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCC------------------c
Q 010325 229 EEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPET------------------E 290 (513)
Q Consensus 229 ~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~------------------~ 290 (513)
..+|++ +++++++++++. ++++.|.+++++++||++++.++++|+++.+|++...... +
T Consensus 7 ~~i~~~--~~~~v~~~~sl~-~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (280)
T 3kh5_A 7 KIAQNK--KIVTVYPTTTIR-KALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAIN 83 (280)
T ss_dssp GTSCCS--CCCCBCTTSBHH-HHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHTT
T ss_pred HHhcCC--CcEEECCCCcHH-HHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHhh
Confidence 345665 899999999998 9999999999999999986458999999999998754211 3
Q ss_pred ccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCccccccCCCCCCCCccccccccccC
Q 010325 291 TPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKT 370 (513)
Q Consensus 291 ~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dile~i~g~~~~s~~~~p~~~~~~~~~ 370 (513)
.+++++|.++++++++++++.++++.|.+++.+.+||+|++|++.|++ |.+|+++.+.+....+. +. ..-+..
T Consensus 84 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Giv--t~~dl~~~~~~~~~~~~---~v--~~~m~~ 156 (280)
T 3kh5_A 84 EPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLI--TERDVIRALLDKIDENE---VI--DDYITR 156 (280)
T ss_dssp SBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEE--EHHHHHHHHGGGSCTTC---BS--GGGCBC
T ss_pred hhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEE--EHHHHHHHHhhcCCCCC---CH--HHHhCC
Confidence 478999888999999999999999999999999999999999999999 99999988765544321 11 112234
Q ss_pred CceEecCCCCCccccccccccccCCCCccccccccccccCCCccceecchHHHHHHHh
Q 010325 371 ESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELL 428 (513)
Q Consensus 371 ~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g~liGIITleDv~eel~ 428 (513)
..+.++.+.++.+..+.+...- .+.+++. ++|+++|+||.+|+++.+.
T Consensus 157 ~~~~v~~~~~l~~~~~~~~~~~------~~~~~Vv----~~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 157 DVIVATPGERLKDVARTMVRNG------FRRLPVV----SEGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp SCCCBCTTCBHHHHHHHHHHHT------CSEEEEE----ETTEEEEEEEHHHHHHHHT
T ss_pred CCeEECCCCcHHHHHHHHHHcC------CCEEEEE----ECCEEEEEEEHHHHHHHHh
Confidence 5678888888877666655321 2223443 5789999999999999875
No 26
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.68 E-value=4.3e-17 Score=140.86 Aligned_cols=100 Identities=11% Similarity=0.227 Sum_probs=90.9
Q ss_pred cccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCCcccccccccccceeeC
Q 010325 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVP 305 (513)
Q Consensus 226 ~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~dim~~~~~~Vp 305 (513)
.+|+++|++ +++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++........+++++|.+++.+++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~ 76 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVDEH-GKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAH 76 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEECTT-SBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEE
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEEC
Confidence 368999997 788999999999 99999999999999999865 89999999999997654445689999889999999
Q ss_pred CCCCHHHHHHHHHhCCceEEEEEe
Q 010325 306 SDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 306 e~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
+++++.++++.|.+++.+.+||+|
T Consensus 77 ~~~~l~~~~~~~~~~~~~~l~Vvd 100 (122)
T 3kpb_A 77 EDEPVDHVAIKMSKYNISGVPVVD 100 (122)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCCCHHHHHHHHHHhCCCeEEEEC
Confidence 999999999999999999999999
No 27
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.68 E-value=4.6e-17 Score=146.17 Aligned_cols=105 Identities=17% Similarity=0.189 Sum_probs=93.2
Q ss_pred hcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC---------Ccc
Q 010325 221 LDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE---------TET 291 (513)
Q Consensus 221 l~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~---------~~~ 291 (513)
..|.+.+|+++|+|..+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++..... ...
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 87 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDPM-YKLHGLISTAMILDGILGLERIEFERLEEM 87 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHTBCSSSBCGGGGGGC
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECCC-CCEEEEEEHHHHHHHHHhhcccchhHHhcC
Confidence 3467789999999977899999999998 99999999999999999865 899999999999875421 246
Q ss_pred cccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 292 ~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
++.++|.++++++++++++.++++.|.+++. +||+|
T Consensus 88 ~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd 123 (150)
T 3lqn_A 88 KVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVN 123 (150)
T ss_dssp BGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEEC
T ss_pred CHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEEC
Confidence 7899988899999999999999999999886 99999
No 28
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.66 E-value=1.8e-16 Score=138.84 Aligned_cols=101 Identities=14% Similarity=0.194 Sum_probs=91.4
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCCc---cccccccccc
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETE---TPVSAVSIRR 300 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~---~~v~dim~~~ 300 (513)
.+.+|+++|++ ++.++++++++. ++++.|.+++++.+||+++ ++++|+|+.+|++....+.. .+++++|.++
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 77 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTA-DAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLET 77 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBC
T ss_pred cceEHHHhhcC--CcceECCCCCHH-HHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCC
Confidence 56799999997 788899999999 9999999999999999986 89999999999997654322 5689998889
Q ss_pred ceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 301 ~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
+.++++++++.++++.|.+++.+.+||+|
T Consensus 78 ~~~v~~~~~l~~~~~~~~~~~~~~lpVvd 106 (128)
T 3gby_A 78 VRSYRPGEQLFDNLISVAAAKCSVVPLAD 106 (128)
T ss_dssp CCCBCTTSBGGGSHHHHHHCSSSEEEEEC
T ss_pred CcEECCCCCHHHHHHHHHhCCCcEEEEEC
Confidence 99999999999999999999999999999
No 29
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.66 E-value=4.2e-16 Score=137.73 Aligned_cols=104 Identities=13% Similarity=0.235 Sum_probs=91.6
Q ss_pred hcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhc-cCC---CCccccccc
Q 010325 221 LDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLT-VRP---ETETPVSAV 296 (513)
Q Consensus 221 l~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~-~~~---~~~~~v~di 296 (513)
+.|.+.+|+++|++ +++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++. ... ....++.++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~ 77 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVINDD-GNVVGFFTKSDIIRRVIVPGLPYDIPVERI 77 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCCCTTSBGGGT
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHhcCCcccCCHHHH
Confidence 46788999999986 888999999999 99999999999999999854 89999999999973 322 134678999
Q ss_pred ccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 297 SIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 297 m~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
|.++++++++++++.++++.|.+++.+.+ |+|
T Consensus 78 m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd 109 (138)
T 2yzi_A 78 MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIE 109 (138)
T ss_dssp CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEE
T ss_pred hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EEC
Confidence 88899999999999999999999999989 999
No 30
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.66 E-value=1.3e-16 Score=147.01 Aligned_cols=103 Identities=17% Similarity=0.198 Sum_probs=91.8
Q ss_pred ccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC------------------
Q 010325 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR------------------ 286 (513)
Q Consensus 225 ~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~------------------ 286 (513)
..+|+++|+|+.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++...
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 80 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVTGLPVIDDN-WTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 80 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHTCC-------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CeEEEEEEHHHHHhhhhhccccCCcccccccccc
Confidence 468999999988899999999999 99999999999999999865 7999999999998531
Q ss_pred -------------CCCcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 287 -------------PETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 287 -------------~~~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
.....+++++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 136 (180)
T 3sl7_A 81 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVD 136 (180)
T ss_dssp CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEEC
T ss_pred hhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEEC
Confidence 1124678899888889999999999999999999999999999
No 31
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.66 E-value=2.5e-16 Score=138.26 Aligned_cols=102 Identities=16% Similarity=0.233 Sum_probs=91.2
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCC---CCcccccccccc
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP---ETETPVSAVSIR 299 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~---~~~~~v~dim~~ 299 (513)
|++.+|+++|++ +++++++++++. ++++.|.+++++++||++ + ++++|+|+.+|++.... ....+++++|.+
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~ 75 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVD-G-NKPVGIITERDIVKAIGKGKSLETKAEEFMTA 75 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC
Confidence 467899999997 788899999998 999999999999999998 4 79999999999986432 124688999888
Q ss_pred cceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 300 RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 300 ~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
++.++++++++.++++.|.+++.+.+||+|
T Consensus 76 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd 105 (133)
T 2ef7_A 76 SLITIREDSPITGALALMRQFNIRHLPVVD 105 (133)
T ss_dssp CCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEEC
Confidence 899999999999999999999999999999
No 32
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.65 E-value=1.2e-16 Score=146.50 Aligned_cols=110 Identities=12% Similarity=0.177 Sum_probs=97.2
Q ss_pred HHhhcCcccccccccccC-ccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCC-----CCcc
Q 010325 218 SGALDLTEKTAEEAMTPI-ESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP-----ETET 291 (513)
Q Consensus 218 ~~vl~l~~~~V~dIMtPr-~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~-----~~~~ 291 (513)
+....+...+|+++|+|+ .+++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++.... ....
T Consensus 16 ~~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~ 93 (165)
T 3fhm_A 16 NLYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTDAD-GVVLGIFTERDLVKAVAGQGAASLQQ 93 (165)
T ss_dssp CCCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHGGGGGTS
T ss_pred hhhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHhcCCccccC
Confidence 345668889999999985 5788999999999 99999999999999999865 89999999999986422 1246
Q ss_pred cccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 292 ~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
++.++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 94 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 131 (165)
T 3fhm_A 94 SVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE 131 (165)
T ss_dssp BGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred CHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 89999889999999999999999999999999999999
No 33
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.64 E-value=1.2e-16 Score=143.69 Aligned_cols=102 Identities=18% Similarity=0.191 Sum_probs=92.6
Q ss_pred cccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC----Ccccccccccccc
Q 010325 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE----TETPVSAVSIRRI 301 (513)
Q Consensus 226 ~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~----~~~~v~dim~~~~ 301 (513)
.+|+++|+|+.+++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++..... ...++.++|.+++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESC
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCC
Confidence 58999999888899999999999 99999999999999999865 899999999999875332 3467899988889
Q ss_pred eeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 302 PRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 302 ~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
++|++++++.++++.|.+++.+.+||+|
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd 133 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVAD 133 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEec
Confidence 9999999999999999999999999999
No 34
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.64 E-value=3.5e-16 Score=139.10 Aligned_cols=99 Identities=11% Similarity=0.190 Sum_probs=89.0
Q ss_pred cccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCC--cEEEEEEhhhhhccCC---CCccccccccccc
Q 010325 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPK--NIIGLLLVKSLLTVRP---ETETPVSAVSIRR 300 (513)
Q Consensus 226 ~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d--~ivGiV~~kDLl~~~~---~~~~~v~dim~~~ 300 (513)
.+|+++|++ +++++++++++. ++++.|.+++++++||++++ + +++|+|+.+|++.... ..+.++.++|.++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTARD-NPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEETT-EEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCC
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCC
Confidence 679999996 889999999999 99999999999999999864 5 8999999999986532 1246889998899
Q ss_pred ceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 301 ~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
+++++++ ++.++++.|.+++.+.+||+|
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd 108 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVN 108 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEEC
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEc
Confidence 9999999 999999999999999999999
No 35
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.64 E-value=2.1e-16 Score=143.64 Aligned_cols=104 Identities=18% Similarity=0.260 Sum_probs=91.9
Q ss_pred cCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC---------Cccc
Q 010325 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE---------TETP 292 (513)
Q Consensus 222 ~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~---------~~~~ 292 (513)
.+.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++..... ...+
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIMNSIFGLERIEFEKLDQIT 87 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHHHHHBCSSSBCGGGTTTSB
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHHHHhhhhcccchhhhccCC
Confidence 577899999999877899999999999 99999999999999999865 799999999999865322 2467
Q ss_pred ccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 293 VSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 293 v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
+.++|.+++++|++++++.++++.|.+++. +||+|
T Consensus 88 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd 122 (159)
T 1yav_A 88 VEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVEN 122 (159)
T ss_dssp HHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEEC
T ss_pred HHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEe
Confidence 889988899999999999999999998876 99999
No 36
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.64 E-value=4.1e-16 Score=137.46 Aligned_cols=100 Identities=14% Similarity=0.186 Sum_probs=89.7
Q ss_pred ccccccccC-ccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhc-cCC----CCccccccccccc
Q 010325 227 TAEEAMTPI-ESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLT-VRP----ETETPVSAVSIRR 300 (513)
Q Consensus 227 ~V~dIMtPr-~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~-~~~----~~~~~v~dim~~~ 300 (513)
+|+++|+|+ .+++++++++++. ++++.|.+++++++||++ + ++++|+|+.+|++. ... ....++.++|.++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 83 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMK-D-EKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQ 83 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCS
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCC
Confidence 899999976 6899999999999 999999999999999997 3 79999999999985 221 1346899998889
Q ss_pred ceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 301 ~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
+.++++++++.++++.|.+++.+.+||+|
T Consensus 84 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 112 (135)
T 2rc3_A 84 VAYVDLNNTNEDCMALITEMRVRHLPVLD 112 (135)
T ss_dssp CCCBCTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred CeEECCCCcHHHHHHHHHHhCCCEEEEEe
Confidence 99999999999999999999999999998
No 37
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.63 E-value=7.3e-16 Score=135.99 Aligned_cols=103 Identities=17% Similarity=0.318 Sum_probs=90.9
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhh-hccCCC---Cccccccccc
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSL-LTVRPE---TETPVSAVSI 298 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDL-l~~~~~---~~~~v~dim~ 298 (513)
|.+.+|+++|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+ +..... ...+++++|.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRDKYTLETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSC
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCcCHHHHhC
Confidence 568899999986 788899999998 99999999999999999865 899999999999 764322 3467899988
Q ss_pred ccceeeCCCCCHHHHHHHHHhCC-----ceEEEEEe
Q 010325 299 RRIPRVPSDMPLYDILNEFQKGS-----SHMAAVVK 329 (513)
Q Consensus 299 ~~~~~Vpe~~~l~d~L~~m~~~~-----~~~a~VVD 329 (513)
+++.++++++++.++++.|.+++ .+.+||+|
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd 116 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVD 116 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEEC
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEEC
Confidence 88999999999999999999999 99999999
No 38
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.63 E-value=6.4e-16 Score=139.90 Aligned_cols=101 Identities=11% Similarity=0.156 Sum_probs=90.4
Q ss_pred cccccccccC----ccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC-----Cccccccc
Q 010325 226 KTAEEAMTPI----ESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-----TETPVSAV 296 (513)
Q Consensus 226 ~~V~dIMtPr----~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~-----~~~~v~di 296 (513)
++|+++|+|+ .+++++++++++. ++++.|.+++++++||.+ .++++|+|+.+|++..... ...+++++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVD--GDDIAGIVTERDYARKVVLQERSSKATRVEEI 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEES--SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEee--CCEEEEEEEHHHHHHHHHhccCCccccCHHHH
Confidence 5799999987 6889999999999 999999999999999964 3899999999999875321 34688999
Q ss_pred ccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 297 SIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 297 m~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
|.+++.++++++++.++++.|.+++.+.+||+|
T Consensus 84 m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 116 (157)
T 4fry_A 84 MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD 116 (157)
T ss_dssp SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 888999999999999999999999999999998
No 39
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.63 E-value=6.6e-17 Score=159.76 Aligned_cols=179 Identities=17% Similarity=0.198 Sum_probs=123.6
Q ss_pred cccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCCcccccccccccceeeC
Q 010325 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVP 305 (513)
Q Consensus 226 ~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~dim~~~~~~Vp 305 (513)
++|+++|++ +++++++++++. ++++.+.+++++++||++++ ++++|+++.+|++.... +.+++++|.+++++++
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pV~d~~-~~~~Giv~~~dl~~~~~--~~~v~~~m~~~~~~v~ 74 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRN-YALELFKKYKVRSFPVVNKE-GKLVGIISVKRILVNPD--EEQLAMLVKRDVPVVK 74 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC-------------CCEEEEECTT-CCEEEEEESSCC------------CCCBSCCCEEE
T ss_pred CchHHhccC--CCeEECCCCcHH-HHHHHHHHcCCCeEEEEcCC-CcEEEEEEHHHHHhhhc--cCCHHHHcCCCCcEEC
Confidence 368999995 888999999999 99999999999999999864 89999999999986543 4678899888889999
Q ss_pred CCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCcc-ccccCCCCCCCCccccccccccCCceEecCCCCCccc
Q 010325 306 SDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPK-LNEAKGGDCDLTAPLLSKQDEKTESVVVDVDRPLSSG 384 (513)
Q Consensus 306 e~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dile-~i~g~~~~s~~~~p~~~~~~~~~~~~~vd~~~~i~~~ 384 (513)
+++++.++++.|.+++.+.+||+|++|.+.|++ |.+|+++ .+.+... ....+.. .-+..+.+.++.+.++.+.
T Consensus 75 ~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Gii--t~~di~~~~~~~~~~--~~~~~v~--~~m~~~~~~v~~~~~l~~~ 148 (282)
T 2yzq_A 75 ENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGIL--TVGDIIRRYFAKSEK--YKGVEIE--PYYQRYVSIVWEGTPLKAA 148 (282)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEE--EHHHHHHHTTTTCSG--GGGCBST--TTSBSCCCCEETTSBHHHH
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEE--EHHHHHHHHHhccCC--cccCcHH--HHhCCCCEEECCCCCHHHH
Confidence 999999999999999999999999999999999 9999998 6664311 1111111 1234566888999888777
Q ss_pred cccccccccCCCCccccccccccccCCCccceecchHHHHH
Q 010325 385 SMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFE 425 (513)
Q Consensus 385 ~~~~~~~l~~~~~t~~gl~~~~~~~e~g~liGIITleDv~e 425 (513)
.+.+...- +.++++.. ++|+++|+||..|+++
T Consensus 149 ~~~~~~~~------~~~l~Vvd---~~~~~~Giit~~dl~~ 180 (282)
T 2yzq_A 149 LKALLLSN------SMALPVVD---SEGNLVGIVDETDLLR 180 (282)
T ss_dssp HHHHHTCS------SSEEEEEC---TTSCEEEEEEGGGGGG
T ss_pred HHHHHHcC------CcEEEEEc---CCCeEEEEEEHHHHhh
Confidence 76665321 23344420 4689999999999984
No 40
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.62 E-value=2e-16 Score=159.85 Aligned_cols=187 Identities=16% Similarity=0.200 Sum_probs=141.8
Q ss_pred cccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCC----cEEEEEEhhhhhccCC-------CCccccccc
Q 010325 228 AEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPK----NIIGLLLVKSLLTVRP-------ETETPVSAV 296 (513)
Q Consensus 228 V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d----~ivGiV~~kDLl~~~~-------~~~~~v~di 296 (513)
+.++|++ +++++++++++. ++++.|.+++++++||++++.+ +++|+++.+|++.... ....+++++
T Consensus 116 ~~~~~~~--~~v~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~~~~~~~~v~~~ 192 (323)
T 3t4n_C 116 ALGVDQL--DTASIHPSRPLF-EACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRETHFLKIPIGDL 192 (323)
T ss_dssp HTTC------CCCBCTTSBHH-HHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGGGGGCCSBGGGT
T ss_pred HhCCCCC--CceEeCCCCcHH-HHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCchhhhhCcHHHc
Confidence 4556664 888999999998 9999999999999999986522 3999999999985421 123578888
Q ss_pred ---ccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCccccccCCCCCCCCccccccccccC---
Q 010325 297 ---SIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKT--- 370 (513)
Q Consensus 297 ---m~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dile~i~g~~~~s~~~~p~~~~~~~~~--- 370 (513)
|.++++++++++++.++++.|.+++.+.+||+|++|.++|++ |.+|+++.+.+.... .++.+....+....
T Consensus 193 ~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Gii--t~~dl~~~~~~~~~~-~~~~~v~~~m~~~~~~~ 269 (323)
T 3t4n_C 193 NIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVY--EAYDVLGLIKGGIYN-DLSLSVGEALMRRSDDF 269 (323)
T ss_dssp TCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEE--ETTHHHHHHHTTHHH-HTTSBHHHHGGGSCTTC
T ss_pred CCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEE--eHHHHHHHHhhchhh-hccCCHHHHHhhccccC
Confidence 778899999999999999999999999999999999999999 999999887654321 11223333333222
Q ss_pred -CceEecCCCCCccccccccccccCCCCccccccccccccCCCccceecchHHHHHHHhc
Q 010325 371 -ESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (513)
Q Consensus 371 -~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g~liGIITleDv~eel~~ 429 (513)
+.+.++.+.++.+..+.+.... ++.+++.. ++|+++||||..||++.+++
T Consensus 270 ~~~~~v~~~~~l~~~~~~m~~~~------~~~l~Vvd---~~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 270 EGVYTCTKNDKLSTIMDNIRKAR------VHRFFVVD---DVGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp CCCEEECTTCBHHHHHHHHHHSC------CCEEEEEC---TTSBEEEEEEHHHHHHHHHH
T ss_pred CCCEEECCCCCHHHHHHHHHHhC------CCEEEEEC---CCCcEEEEEEHHHHHHHHHh
Confidence 5789999999988777666432 22234310 47899999999999999986
No 41
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.62 E-value=2.3e-16 Score=157.50 Aligned_cols=184 Identities=20% Similarity=0.183 Sum_probs=147.3
Q ss_pred cCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC-------------
Q 010325 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE------------- 288 (513)
Q Consensus 222 ~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~------------- 288 (513)
+....+|+|+|++ +++++++++++. ++++.|.+++++++||++ ++++|+++.+|++.....
T Consensus 16 ~~~~~~V~dim~~--~~~~v~~~~~v~-~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~~~~~~~~~~~ 89 (296)
T 3ddj_A 16 YFQGMNIETLMIK--NPPILSKEDRLG-SAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCKDSCSQGDLYH 89 (296)
T ss_dssp TTCCSSGGGTCEE--SCCEECTTSBHH-HHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC---CCHHHHHH
T ss_pred hhcccCHHHhccC--CCcEECCCccHH-HHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhcccccccccchhhHH
Confidence 4567899999997 889999999998 999999999999999997 799999999999976521
Q ss_pred -CcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCccccccCCCCCCCCcccccccc
Q 010325 289 -TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQD 367 (513)
Q Consensus 289 -~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dile~i~g~~~~s~~~~p~~~~~~ 367 (513)
...+++++|.++++++++++++.++++.|.+++.+.+||+|+.|.++|++ |.+|+++.+.+..... +....
T Consensus 90 ~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGiv--t~~dl~~~~~~~~~~~----~v~~~-- 161 (296)
T 3ddj_A 90 ISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIV--TEREFLLLYKDLDEIF----PVKVF-- 161 (296)
T ss_dssp HHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEE--EHHHHGGGGGGSCCCC----BHHHH--
T ss_pred HhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEE--eHHHHHHhhhcccccc----cHHHh--
Confidence 13578999988999999999999999999999999999999999999999 9999998775443322 11111
Q ss_pred ccCCceEecCCCCCccccccccccccCCCCccccccccccccCCCccceecchHHHHHHHh
Q 010325 368 EKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELL 428 (513)
Q Consensus 368 ~~~~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g~liGIITleDv~eel~ 428 (513)
+....+.++.+.++.+..+.+...- ...+++.. ++|+++|+||.+|+++.+.
T Consensus 162 m~~~~~~v~~~~~l~~~~~~m~~~~------~~~~~Vvd---~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 162 MSTKVQTIYKEVRLDQAVKLMLRRG------FRRLPVID---DDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp SBCSCCCEETTSBHHHHHHHHHHHT------CSEEEEEC---TTSCEEEEEEHHHHHHHHH
T ss_pred hcCCCeEECCCCCHHHHHHHHHHcC------CCEEEEEc---CCCEEEEEEEHHHHHHHHH
Confidence 2345678888888877666655321 12233310 4789999999999998875
No 42
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.61 E-value=1.3e-15 Score=138.20 Aligned_cols=102 Identities=21% Similarity=0.272 Sum_probs=90.9
Q ss_pred cCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCce-eeeeeCCCCcEEEEEEhhhhhccC--------------
Q 010325 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSR-VPVYSGNPKNIIGLLLVKSLLTVR-------------- 286 (513)
Q Consensus 222 ~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr-~PV~~~~~d~ivGiV~~kDLl~~~-------------- 286 (513)
.+...+|+++|++ +++++++++++. ++++.|.++++++ +||++++ +++|+|+.+||+...
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 4677889999997 899999999999 9999999999999 9999864 899999999998641
Q ss_pred -----CCCcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 287 -----PETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 287 -----~~~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
.....++.++|.+ +++|++++++.++++.|.+++.+.+||+|
T Consensus 87 ~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 133 (157)
T 1o50_A 87 RSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVD 133 (157)
T ss_dssp --CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEc
Confidence 1234678899877 88999999999999999999999999999
No 43
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.61 E-value=1.7e-15 Score=137.77 Aligned_cols=102 Identities=18% Similarity=0.219 Sum_probs=90.3
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCC----CCccccccccc
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP----ETETPVSAVSI 298 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~----~~~~~v~dim~ 298 (513)
+.+++|+++|++ . +++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++.... ....++.++|.
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 88 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVY-DAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIGQQELTSVPVHIIMT 88 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSE
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhccCcccCcCHHHHHc
Confidence 467899999985 3 4899999999 99999999999999999865 89999999999987431 23468999987
Q ss_pred c--cceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 299 R--RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 299 ~--~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
+ ++++|++++++.++++.|.+++.+.+||+|
T Consensus 89 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 121 (159)
T 3fv6_A 89 RMPNITVCRREDYVMDIAKHLIEKQIDALPVIK 121 (159)
T ss_dssp ETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEe
Confidence 7 889999999999999999999999999999
No 44
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.61 E-value=8.4e-16 Score=151.77 Aligned_cols=188 Identities=16% Similarity=0.166 Sum_probs=137.4
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhc-cCCCC----ccccccccc
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLT-VRPET----ETPVSAVSI 298 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~-~~~~~----~~~v~dim~ 298 (513)
.+.+++++|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+++.+|++. ..... ..+++++|.
T Consensus 58 ~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~di~~~~~~~~~~~~~~~v~~~m~ 133 (282)
T 2yzq_A 58 DEEQLAMLVKR--DVPVVKENDTLK-KAAKLMLEYDYRRVVVVDSK-GKPVGILTVGDIIRRYFAKSEKYKGVEIEPYYQ 133 (282)
T ss_dssp ------CCCBS--CCCEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCSGGGGCBSTTTSB
T ss_pred ccCCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHhccCCcccCcHHHHhC
Confidence 35789999997 678899999998 99999999999999999865 78999999999987 54432 457889888
Q ss_pred ccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCc------cccc-------cC-------C----C
Q 010325 299 RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKP------KLNE-------AK-------G----G 354 (513)
Q Consensus 299 ~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dil------e~i~-------g~-------~----~ 354 (513)
++++++++++++.++++.|.+++.+.+||+|++|.+.|++ |.+|++ +... +. . .
T Consensus 134 ~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Gii--t~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (282)
T 2yzq_A 134 RYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIV--DETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLF 211 (282)
T ss_dssp SCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEE--EGGGGGGCGGGCC-------------------------
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEE--EHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHH
Confidence 8899999999999999999999999999999999999999 999998 3331 00 0 0
Q ss_pred ----CCCCCccccccccccCCceEecCCCCCccccccccccccCCCCccccccccccccCCCccceecchHHHHHHHh
Q 010325 355 ----DCDLTAPLLSKQDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELL 428 (513)
Q Consensus 355 ----~s~~~~p~~~~~~~~~~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g~liGIITleDv~eel~ 428 (513)
......|.... +......++.+.++.+..+.+.... ++.+++.. ++|+++||||..||++.+.
T Consensus 212 ~~~~~~~~~~~v~~i--m~~~~~~v~~~~~l~~a~~~m~~~~------~~~lpVvd---~~~~lvGiit~~Dil~~~~ 278 (282)
T 2yzq_A 212 EKFELQLPNKPVAEI--MTRDVIVATPHMTVHEVALKMAKYS------IEQLPVIR---GEGDLIGLIRDFDLLKVLV 278 (282)
T ss_dssp -------CCCBGGGT--CBSSCCCBCTTSBHHHHHHHHHHHT------CSEEEEEE---TTTEEEEEEEHHHHGGGGC
T ss_pred hHhhhhhccCCHHHh--cCCCCceeCCCCCHHHHHHHHHHcC------cceeEEEC---CCCCEEEEEeHHHHHHHHH
Confidence 00011122222 3345678888888877666654321 22344420 3479999999999998776
No 45
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.60 E-value=1.3e-15 Score=131.81 Aligned_cols=99 Identities=14% Similarity=0.205 Sum_probs=88.1
Q ss_pred cccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC----Ccccccccccccc
Q 010325 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE----TETPVSAVSIRRI 301 (513)
Q Consensus 226 ~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~----~~~~v~dim~~~~ 301 (513)
++|+++|++ +++++++++++. ++++.|.+++++++||++ + ++++|+|+.+|++..... ...++.++|.+++
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~ 75 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVK-E-GVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDL 75 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEE-T-TEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGG
T ss_pred CCHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEe-C-CeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCC
Confidence 368999997 888999999999 999999999999999998 4 899999999999864211 2467899988899
Q ss_pred eeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 302 PRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 302 ~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
.++++++++.++++.|.+++.+.+||+|
T Consensus 76 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd 103 (125)
T 1pbj_A 76 VTISPRATIKEAAEKMVKNVVWRLLVEE 103 (125)
T ss_dssp GEECTTSCHHHHHHHHHHHTCSEEEEEE
T ss_pred eEECCCCCHHHHHHHHHhcCCcEEEEEE
Confidence 9999999999999999999999999999
No 46
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.60 E-value=1.7e-15 Score=141.24 Aligned_cols=100 Identities=23% Similarity=0.262 Sum_probs=90.3
Q ss_pred cccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCC-----CCccccccccccc
Q 010325 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP-----ETETPVSAVSIRR 300 (513)
Q Consensus 226 ~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~-----~~~~~v~dim~~~ 300 (513)
.+|+++|++ ++++++.++++. ++++.|.+++++++||++++ ++++|+|+.+|++.... ....+++++|.++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~ 84 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKP 84 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSS
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCC
Confidence 689999986 888999999999 99999999999999999865 79999999999987532 2346789998888
Q ss_pred ceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 301 ~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
+++|++++++.++++.|.+++.+.+||+|
T Consensus 85 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 113 (184)
T 1pvm_A 85 IPKVKSDYDVKDVAAYLSENGLERCAVVD 113 (184)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCSEEEEEC
T ss_pred CcEECCCCCHHHHHHHHHHcCCcEEEEEc
Confidence 99999999999999999999999999999
No 47
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.59 E-value=2.5e-15 Score=136.95 Aligned_cols=102 Identities=24% Similarity=0.256 Sum_probs=90.7
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCC------------CCcc
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP------------ETET 291 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~------------~~~~ 291 (513)
...+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+||+.... ....
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~ 78 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDAN-KKLLGIVSQRDLLAAQESSLQRSAQGDSLAFET 78 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHHHCC---------CCC
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHHhhcccccccchhccc
Confidence 46789999997 788899999998 99999999999999999864 78999999999986421 2346
Q ss_pred cccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 292 ~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
++.++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 79 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 116 (160)
T 2o16_A 79 PLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA 116 (160)
T ss_dssp BHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE
T ss_pred CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE
Confidence 78899888999999999999999999999999999999
No 48
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.59 E-value=9.9e-16 Score=134.46 Aligned_cols=103 Identities=14% Similarity=0.228 Sum_probs=88.9
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhc-cCCC----Ccccccccc
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLT-VRPE----TETPVSAVS 297 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~-~~~~----~~~~v~dim 297 (513)
+.-.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++. .... ...+++++|
T Consensus 5 ~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m 80 (133)
T 1y5h_A 5 FTMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVIKGLAAGLDPNTATAGELA 80 (133)
T ss_dssp ---CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHH
T ss_pred hhhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHHHHHhcCCCccccCHHHHh
Confidence 344689999986 788899999999 99999999999999999754 89999999999983 3221 246789998
Q ss_pred cccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 298 IRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 298 ~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
.++++++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 112 (133)
T 1y5h_A 81 RDSIYYVDANASIQEMLNVMEEHQVRRVPVIS 112 (133)
T ss_dssp TTCCCCEETTCCHHHHHHHHHHHTCSEEEEEE
T ss_pred cCCCEEECCCCCHHHHHHHHHHcCCCEEEEEE
Confidence 88999999999999999999999999999999
No 49
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.59 E-value=2.1e-15 Score=139.72 Aligned_cols=106 Identities=14% Similarity=0.172 Sum_probs=91.1
Q ss_pred CcccccccccccCcc--EEEE--eCCCCccHHHHHHHHhcCCceeeeee-CCCCcEEEEEEhhhhhccCC----------
Q 010325 223 LTEKTAEEAMTPIES--TFSL--DVNSKLDWEAMGKILARGHSRVPVYS-GNPKNIIGLLLVKSLLTVRP---------- 287 (513)
Q Consensus 223 l~~~~V~dIMtPr~~--vv~v--~~d~sl~~eal~~i~~~~~sr~PV~~-~~~d~ivGiV~~kDLl~~~~---------- 287 (513)
+.+.+|+++|+|..+ ++++ ++++++. ++++.|.+++++++||++ ++.++++|+|+.+|++....
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~ 86 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVV 86 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCC
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcc
Confidence 367899999998643 7778 9999998 999999999999999994 33489999999999986421
Q ss_pred ------------------CCcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 288 ------------------ETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 288 ------------------~~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
....++.++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 146 (185)
T 2j9l_A 87 STSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH 146 (185)
T ss_dssp TTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred ccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE
Confidence 224678899888999999999999999999999999999998
No 50
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.59 E-value=1.8e-15 Score=137.25 Aligned_cols=109 Identities=14% Similarity=0.159 Sum_probs=90.7
Q ss_pred HHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeC-CCCcEEEEEEhhhhhccCCC--------
Q 010325 218 SGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSG-NPKNIIGLLLVKSLLTVRPE-------- 288 (513)
Q Consensus 218 ~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~-~~d~ivGiV~~kDLl~~~~~-------- 288 (513)
.+.+.+.+.+|+++|++ ++++++.++++. ++++.|.+++++++||+++ +.++++|+|+.+|++.....
T Consensus 5 ~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~ 81 (164)
T 2pfi_A 5 GRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPG 81 (164)
T ss_dssp -----CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------C
T ss_pred cccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCc
Confidence 44566788999999997 788899999998 9999999999999999986 34899999999999864321
Q ss_pred Cccccccccccc------ceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 289 TETPVSAVSIRR------IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 289 ~~~~v~dim~~~------~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
...++.++|..+ +.++++++++.++++.|.+++.+.+||+|
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 128 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS 128 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred ccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE
Confidence 124677877665 68899999999999999999999999998
No 51
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.58 E-value=1.9e-15 Score=133.89 Aligned_cols=103 Identities=15% Similarity=0.167 Sum_probs=87.6
Q ss_pred Cccccccc---ccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC-----Cccccc
Q 010325 223 LTEKTAEE---AMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-----TETPVS 294 (513)
Q Consensus 223 l~~~~V~d---IMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~-----~~~~v~ 294 (513)
+-+.++++ +|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++..... ...++.
T Consensus 5 ~~~~~v~~~~~~~~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~ 80 (144)
T 2nyc_A 5 FLKIPIGDLNIITQD--NMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSVG 80 (144)
T ss_dssp GGGSBGGGSSCCBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC----CCSBHH
T ss_pred hhhcchhhcCCCCCC--CceEECCCCcHH-HHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhcccccccCCccHH
Confidence 45677888 7774 888999999999 99999999999999999865 899999999999864322 246788
Q ss_pred ccccc------cceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 295 AVSIR------RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 295 dim~~------~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
++|.+ ++.++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 121 (144)
T 2nyc_A 81 EALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD 121 (144)
T ss_dssp HHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEEC
Confidence 88765 688999999999999999999999999999
No 52
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.56 E-value=5.1e-15 Score=133.49 Aligned_cols=101 Identities=15% Similarity=0.188 Sum_probs=87.8
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC-----Ccccccccc
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-----TETPVSAVS 297 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~-----~~~~v~dim 297 (513)
+.+.+|+++ .+++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++..... ...++.++|
T Consensus 20 l~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m 93 (152)
T 2uv4_A 20 LEELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 93 (152)
T ss_dssp HHHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGG
T ss_pred HHHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhhhhhcchHHHHH
Confidence 466778887 3788899999998 99999999999999999865 899999999999864321 245788887
Q ss_pred c------ccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 298 I------RRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 298 ~------~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
. ++++++++++++.++++.|.+++.+.+||+|
T Consensus 94 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 131 (152)
T 2uv4_A 94 QHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVD 131 (152)
T ss_dssp GTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEEC
Confidence 5 7889999999999999999999999999999
No 53
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.55 E-value=2.1e-14 Score=137.56 Aligned_cols=99 Identities=12% Similarity=0.060 Sum_probs=89.8
Q ss_pred ccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCCcccccccccccceee
Q 010325 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRV 304 (513)
Q Consensus 225 ~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~dim~~~~~~V 304 (513)
.-+++++|++ ++++++++.++. ++++.|.+++++++||++++ ++++|+|+.+|++.... +.+++++|.++++++
T Consensus 12 ~~~~~~~~~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~l~Givt~~dl~~~~~--~~~v~~im~~~~~~v 85 (213)
T 1vr9_A 12 HMKVKKWVTQ--DFPMVEESATVR-ECLHRMRQYQTNECIVKDRE-GHFRGVVNKEDLLDLDL--DSSVFNKVSLPDFFV 85 (213)
T ss_dssp -CBGGGGCBS--CSCEEETTCBHH-HHHHHHHHTTSSEEEEECTT-SBEEEEEEGGGGTTSCT--TSBSGGGCBCTTCCE
T ss_pred ccCHHHhhcC--CCeEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CEEEEEEEHHHHHhhcC--CCcHHHHccCCCEEE
Confidence 4578999986 888999999999 99999999999999999864 89999999999987643 567999998899999
Q ss_pred CCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 305 PSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 305 pe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
++++++.++++.|.+++.+.+||+|
T Consensus 86 ~~~~~l~~a~~~m~~~~~~~lpVvd 110 (213)
T 1vr9_A 86 HEEDNITHALLLFLEHQEPYLPVVD 110 (213)
T ss_dssp ETTSBHHHHHHHHHHCCCSEEEEEC
T ss_pred CCCCcHHHHHHHHHHhCCCEEEEEc
Confidence 9999999999999999999999999
No 54
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.54 E-value=4e-15 Score=150.92 Aligned_cols=188 Identities=17% Similarity=0.200 Sum_probs=142.5
Q ss_pred ccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC----------Cccccccc
Q 010325 227 TAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE----------TETPVSAV 296 (513)
Q Consensus 227 ~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~----------~~~~v~di 296 (513)
+++++|++ +++++++++++. ++++.|.+++++++||++++.++++|+|+.+|++..... ...+++++
T Consensus 119 ~~~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~ 195 (330)
T 2v8q_E 119 VYLQDSFK--PLVCISPNASLF-DAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEEL 195 (330)
T ss_dssp HHSSSSCC--CCCCBCTTSBHH-HHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSSSCCGGGGSBHHHH
T ss_pred HHhhcccC--CceEeCCCCCHH-HHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhccCchhhhcCCHHHh
Confidence 45688986 788999999998 999999999999999998624899999999999864311 01234443
Q ss_pred --cc-ccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCccccccCCCCCCCCcccccccc----cc
Q 010325 297 --SI-RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQD----EK 369 (513)
Q Consensus 297 --m~-~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dile~i~g~~~~s~~~~p~~~~~~----~~ 369 (513)
|. ++++++++++++.++++.|.+++.+.+||+|+.|.+.|++ |.+|+++.+.+..... ++.+...... +.
T Consensus 196 ~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Gii--t~~dl~~~~~~~~~~~-~~~~v~~~~~~~~~~~ 272 (330)
T 2v8q_E 196 QIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIY--SKFDVINLAAEKTYNN-LDVSVTKALQHRSHYF 272 (330)
T ss_dssp TCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEE--EGGGTGGGGGSSCCCC-CSSBHHHHGGGCCSCC
T ss_pred cccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEE--EHHHHHHHHhcccccc-ccCcHHHHHhcccccc
Confidence 32 6788999999999999999999999999999999999999 9999999887553322 1223322222 13
Q ss_pred CCceEecCCCCCccccccccccccCCCCccccccccccccCCCccceecchHHHHHHHhc
Q 010325 370 TESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (513)
Q Consensus 370 ~~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g~liGIITleDv~eel~~ 429 (513)
...+.++.+.++.+..+.+...- ++.+++.. ++|+++||||..||++.+..
T Consensus 273 ~~~~~v~~~~~l~~a~~~m~~~~------~~~l~Vvd---~~g~l~Giit~~Dil~~~~~ 323 (330)
T 2v8q_E 273 EGVLKCYLHETLEAIINRLVEAE------VHRLVVVD---EHDVVKGIVSLSDILQALVL 323 (330)
T ss_dssp CSCCEECTTSBHHHHHHHHHHHT------CSEEEEEC---TTSBEEEEEEHHHHHHHHHS
T ss_pred CCCeEECCCCcHHHHHHHHHHCC------CcEEEEEc---CCCcEEEEEeHHHHHHHHHh
Confidence 56789999999887776665321 12233310 46899999999999999873
No 55
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.54 E-value=1.6e-14 Score=155.59 Aligned_cols=151 Identities=15% Similarity=0.176 Sum_probs=122.4
Q ss_pred ccccHHHHHHHHHHhhhhhccCCCCC-----hhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcC
Q 010325 185 ALFRRAQLKALVTIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARG 259 (513)
Q Consensus 185 ~~~s~eeL~~lv~~~~~e~~~~g~L~-----~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~ 259 (513)
..++++|+...+.. ++..|.|. +++++++++++++ +++|++ +++++++++++. ++++.|.+++
T Consensus 53 ~~vt~~eLa~av~~----~Gg~G~i~~~~~~e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~ 120 (491)
T 1zfj_A 53 DTVTGSKMAIAIAR----AGGLGVIHKNMSITEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYR 120 (491)
T ss_dssp TTTCSHHHHHHHHH----TTCEEEECCSSCHHHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTT
T ss_pred hhccHHHHHHHHHH----cCCceEEeCCCCHHHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcC
Confidence 34677899988862 22223344 6788889888765 679997 888999999998 9999999999
Q ss_pred CceeeeeeC-CCCcEEEEEEhhhhhccCCCCcccccccccc-cceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccC
Q 010325 260 HSRVPVYSG-NPKNIIGLLLVKSLLTVRPETETPVSAVSIR-RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTL 337 (513)
Q Consensus 260 ~sr~PV~~~-~~d~ivGiV~~kDLl~~~~~~~~~v~dim~~-~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Gi 337 (513)
++++||+++ +.++++|+|+.+|++... ..+.+++++|.+ ++++|++++++.++++.|++++.+.+||||++|.++|+
T Consensus 121 ~~~~pVvd~~~~~~lvGivt~~Dl~~~~-~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGi 199 (491)
T 1zfj_A 121 ISGVPIVETLANRKLVGIITNRDMRFIS-DYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGL 199 (491)
T ss_dssp CSEEEEESCTTTCBEEEEEEHHHHHHCS-CSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEE
T ss_pred CCEEEEEEeCCCCEEEEEEEHHHHhhhc-cCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEE
Confidence 999999982 348999999999998643 346789999877 88999999999999999999999999999976666666
Q ss_pred CCCCCCCCccccc
Q 010325 338 PPMTDGKKPKLNE 350 (513)
Q Consensus 338 v~~T~~dile~i~ 350 (513)
+ |.+|+++.+.
T Consensus 200 v--t~~Dil~~~~ 210 (491)
T 1zfj_A 200 I--TIKDIEKVIE 210 (491)
T ss_dssp E--EHHHHHHHHH
T ss_pred E--EHHHHHHHHh
Confidence 6 6666665554
No 56
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.53 E-value=2.1e-15 Score=153.12 Aligned_cols=188 Identities=12% Similarity=0.127 Sum_probs=142.9
Q ss_pred ccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCc----EEEEEEhhhhhccCCC-------Ccccccc--
Q 010325 229 EEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKN----IIGLLLVKSLLTVRPE-------TETPVSA-- 295 (513)
Q Consensus 229 ~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~----ivGiV~~kDLl~~~~~-------~~~~v~d-- 295 (513)
+++|++..+++++++++++. ++++.|.+++++++||++++.++ ++|+++.+|++..... ...++++
T Consensus 110 ~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~v~~l~ 188 (334)
T 2qrd_G 110 RKIGAIPPETIYVHPMHSLM-DACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKETAMLRVPLNQMT 188 (334)
T ss_dssp HHHTCSCSSCCCBCTTSBHH-HHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGGGGGCCCBGGGSS
T ss_pred HhhccCCCceeeeCCCCcHH-HHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccchhhhhCcHHHhC
Confidence 45787655568899999998 99999999999999999865345 9999999999864321 1356777
Q ss_pred -cccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCccccccCCCCCCCCcccccccccc----C
Q 010325 296 -VSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEK----T 370 (513)
Q Consensus 296 -im~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dile~i~g~~~~s~~~~p~~~~~~~~----~ 370 (513)
+|.+++.++++++++.++++.|.+++.+.+||+|++|.+.|++ |.+|+++.+.+..... ...+....+... .
T Consensus 189 ~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Gii--t~~dl~~~~~~~~~~~-~~~~v~~~m~~~~~~~~ 265 (334)
T 2qrd_G 189 IGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVY--ESVDVMHLIQDGDYSN-LDLSVGEALLKRPANFD 265 (334)
T ss_dssp CSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEE--ETHHHHHHHTTSCGGG-GGSBHHHHHTTCCTTCC
T ss_pred CcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEE--EHHHHHHHhhcccccc-ccCcHHHHHhcccccCC
Confidence 4778899999999999999999999999999999999999999 9999998876543211 122222222211 3
Q ss_pred CceEecCCCCCccccccccccccCCCCccccccccccccCCCccceecchHHHHHHHhc
Q 010325 371 ESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (513)
Q Consensus 371 ~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~~~~~~e~g~liGIITleDv~eel~~ 429 (513)
+.+.++.+.++.+..+.+...- ++.+++.. ++|+++||||..||++.+.+
T Consensus 266 ~~~~v~~~~~l~~~~~~m~~~~------~~~l~Vvd---~~g~l~Giit~~dil~~~~~ 315 (334)
T 2qrd_G 266 GVHTCRATDRLDGIFDAIKHSR------VHRLFVVD---ENLKLEGILSLADILNYIIY 315 (334)
T ss_dssp CCCEECTTCBHHHHHHHHHHSC------CCEEEEEC---TTCBEEEEEEHHHHHHHHHS
T ss_pred CCEEECCCCcHHHHHHHHHHcC------CCEEEEEC---CCCeEEEEEeHHHHHHHHHh
Confidence 6788999999988777765432 22233310 46899999999999999884
No 57
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.52 E-value=2.3e-14 Score=154.83 Aligned_cols=151 Identities=15% Similarity=0.184 Sum_probs=121.2
Q ss_pred ccccHHHHHHHHHHhhhhhccCCCCC-----hhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcC
Q 010325 185 ALFRRAQLKALVTIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARG 259 (513)
Q Consensus 185 ~~~s~eeL~~lv~~~~~e~~~~g~L~-----~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~ 259 (513)
...+++++...+...+ .-|.|. +++.+++++++. .+++|++ +++++++++++. ++++.|.+++
T Consensus 76 dtvTe~~lAia~a~~G----giGvIh~~~~~~~q~~~V~~V~~-----~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~ 143 (511)
T 3usb_A 76 DTVTEADMAIAMARQG----GLGIIHKNMSIEQQAEQVDKVKR-----SESGVIS--DPFFLTPEHQVY-DAEHLMGKYR 143 (511)
T ss_dssp TTTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHHHT-----SSSCSSS--SCCCBCTTSBHH-HHHHHHHHHC
T ss_pred hhhcHHHHHHHHHhcC----CceeecccCCHHHHHHHHHHhhc-----ccccccc--CCEEECCCCCHH-HHHHHHHHcC
Confidence 3467888877764221 113332 455667888875 4567875 888999999999 9999999999
Q ss_pred CceeeeeeC-CCCcEEEEEEhhhhhccCCCCcccccccccc-cceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccC
Q 010325 260 HSRVPVYSG-NPKNIIGLLLVKSLLTVRPETETPVSAVSIR-RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTL 337 (513)
Q Consensus 260 ~sr~PV~~~-~~d~ivGiV~~kDLl~~~~~~~~~v~dim~~-~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Gi 337 (513)
++++||+++ ..++++|+|+.+||+.. ...+.+++++|.+ ++++|++++++.++++.|++++.+.+||||++|.+.|+
T Consensus 144 ~s~~pVvd~g~~~~lvGiVt~rDl~~~-~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~Gi 222 (511)
T 3usb_A 144 ISGVPVVNNLDERKLVGIITNRDMRFI-QDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGL 222 (511)
T ss_dssp CSEEEEESCTTTCBEEEEEEHHHHTTC-CCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEE
T ss_pred CcEEEEEecCCCCEEEEEEEehHhhhh-ccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeee
Confidence 999999986 13899999999999853 3345789999887 89999999999999999999999999999988888888
Q ss_pred CCCCCCCCccccc
Q 010325 338 PPMTDGKKPKLNE 350 (513)
Q Consensus 338 v~~T~~dile~i~ 350 (513)
+ |.+|+++.+.
T Consensus 223 I--T~~Dil~~~~ 233 (511)
T 3usb_A 223 I--TIKDIEKVIE 233 (511)
T ss_dssp E--EHHHHHHHHH
T ss_pred c--cHHHHHHhhh
Confidence 8 7777777765
No 58
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.52 E-value=4.7e-15 Score=164.44 Aligned_cols=124 Identities=19% Similarity=0.090 Sum_probs=109.0
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHH-hcCCceeeeeeCCCCcEEEEEEhhhhhccCCCCc------------
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKIL-ARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETE------------ 290 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~-~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~------------ 290 (513)
.+.+|+|+|+||+++++++++++++ |+.+.+. +++++++||+|++ ++++|+|+.+|++.......
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~~-~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDAN-GYLLGAISRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCTT-CBBCCEESHHHHTTTTTTC-------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEecC-CeEEEEEEHHHHHHHHHHHhhhcccccccccc
Confidence 6789999999999999999999999 9999999 7999999999874 89999999999987532210
Q ss_pred ---------------------------------------ccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEecC
Q 010325 291 ---------------------------------------TPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAK 331 (513)
Q Consensus 291 ---------------------------------------~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~ 331 (513)
.+++++|.+++.+|++++++.++++.|++++.+.+||+ |+
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~ 607 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ER 607 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ET
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-EC
Confidence 02778899999999999999999999999999999999 89
Q ss_pred CCcccCCCCCCCCCccccccC
Q 010325 332 GKSKTLPPMTDGKKPKLNEAK 352 (513)
Q Consensus 332 G~~~Giv~~T~~dile~i~g~ 352 (513)
|+++|++ |.+|+++.+.++
T Consensus 608 G~lvGIV--T~~Dll~~~~~~ 626 (632)
T 3org_A 608 GKLVGIV--EREDVAYGYSNS 626 (632)
T ss_dssp TEEEEEE--EGGGTEECCCC-
T ss_pred CEEEEEE--ehhhHHHHHhhh
Confidence 9999999 999999887643
No 59
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.51 E-value=3.9e-15 Score=160.36 Aligned_cols=150 Identities=16% Similarity=0.217 Sum_probs=113.7
Q ss_pred ccccHHHHHHHHHHhhhhhccCCCC-----ChhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcC
Q 010325 185 ALFRRAQLKALVTIHSQEAGKGGEL-----THDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARG 259 (513)
Q Consensus 185 ~~~s~eeL~~lv~~~~~e~~~~g~L-----~~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~ 259 (513)
..++++++...+... +.-|.| .++++++++++ ++++++|++ +++++++++++. ++++.|.+++
T Consensus 52 dtVTe~~ma~a~a~~----GGiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~~--d~v~v~~~~tv~-ea~~~m~~~~ 119 (496)
T 4fxs_A 52 DTVTEARLAIALAQE----GGIGFIHKNMSIEQQAAQVHQV-----KIFEAGVVT--HPVTVRPEQTIA-DVMELTHYHG 119 (496)
T ss_dssp TTTCSHHHHHHHHHH----TCEEEECSSSCHHHHHHHHHHH-----HHCCC--CB--CCCCBCSSSBHH-HHHHHHTSSC
T ss_pred chhhHHHHHHHHHHc----CCcceecCCCCHHHHHHHHHhc-----ccccccccc--CceEECCCCCHH-HHHHHHHHcC
Confidence 456788988887522 112334 56788999998 456789985 889999999999 9999999999
Q ss_pred CceeeeeeCCCCcEEEEEEhhhhhccCCCCccccccccc-c-cceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccC
Q 010325 260 HSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSI-R-RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTL 337 (513)
Q Consensus 260 ~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~dim~-~-~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Gi 337 (513)
|+++||++++ ++++|+|+.+||+.. ...+.+++++|. + +++++++++++.++++.|++++.+.+|||||+|.++|+
T Consensus 120 ~s~~PVvd~~-~~lvGiVt~rDL~~~-~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~Gi 197 (496)
T 4fxs_A 120 FAGFPVVTEN-NELVGIITGRDVRFV-TDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGM 197 (496)
T ss_dssp CCEEEEECSS-SBEEEEEEHHHHTTC-CCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEE
T ss_pred CcEEEEEccC-CEEEEEEEHHHHhhc-ccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEe
Confidence 9999999875 899999999999843 234578999976 4 58999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccc
Q 010325 338 PPMTDGKKPKLNE 350 (513)
Q Consensus 338 v~~T~~dile~i~ 350 (513)
+ |.+|+++...
T Consensus 198 I--T~~DIl~~~~ 208 (496)
T 4fxs_A 198 I--TAKDFHKAES 208 (496)
T ss_dssp E--CCC-----CC
T ss_pred e--hHhHHHHhhc
Confidence 9 9999998754
No 60
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.46 E-value=9.3e-14 Score=150.87 Aligned_cols=102 Identities=13% Similarity=0.168 Sum_probs=89.0
Q ss_pred CcccccccccccCccEEEEeCC-CCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC----CCCcccccccc
Q 010325 223 LTEKTAEEAMTPIESTFSLDVN-SKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR----PETETPVSAVS 297 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d-~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~----~~~~~~v~dim 297 (513)
+.+.+|+++|++ ++++++++ +++. ++++.|.+++++++||++++.++++|+|+.+||+... .....+++++|
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im 457 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKAL 457 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHh
Confidence 567899999996 88899999 9999 9999999999999999983348999999999998542 22357899999
Q ss_pred cccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 298 IRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 298 ~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
.+++++|++++++.++++.|.+++ ++||||
T Consensus 458 ~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd 487 (527)
T 3pc3_A 458 NKRVIRLNESEILGKLARVLEVDP--SVLILG 487 (527)
T ss_dssp ETTCCEEETTSBHHHHHHHHTTCS--EEEEEE
T ss_pred cCCCeEECCCCcHHHHHHHHhhCC--EEEEEe
Confidence 999999999999999999997766 479999
No 61
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.45 E-value=1.1e-14 Score=157.22 Aligned_cols=153 Identities=10% Similarity=0.087 Sum_probs=20.4
Q ss_pred cccHHHHHHHHHHhhhhhccCCC----CC-hhHHHHHHHhhcCcccccccc-cccCccEEEEeCCCCccHHHHHHHHhcC
Q 010325 186 LFRRAQLKALVTIHSQEAGKGGE----LT-HDETTIISGALDLTEKTAEEA-MTPIESTFSLDVNSKLDWEAMGKILARG 259 (513)
Q Consensus 186 ~~s~eeL~~lv~~~~~e~~~~g~----L~-~~E~~~I~~vl~l~~~~V~dI-MtPr~~vv~v~~d~sl~~eal~~i~~~~ 259 (513)
..+++++...+... ...|. ++ ++++++++++.. .++ |++ +++++++++++. ++++.|.+++
T Consensus 61 ~vt~~~la~~la~~----gg~G~I~~~~~~e~~~~~v~~V~~------~e~gM~~--~~~~v~~~~tv~-eal~~m~~~~ 127 (503)
T 1me8_A 61 SVSGEKMAIALARE----GGISFIFGSQSIESQAAMVHAVKN------FKAGFVV--SDSNVKPDQTFA-DVLAISQRTT 127 (503)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECCSSCHHHHHHHHHHHHT------TTC-----------------------------
T ss_pred hhhHHHHHHHHHhC----CCcceeeCCCCHHHHHHHHhhhhh------cccCccc--CCeEECCCCcHH-HHHHHHHHcC
Confidence 45678887777521 11111 22 466777777654 345 997 899999999999 9999999999
Q ss_pred CceeeeeeCC--CCcEEEEEEhhhhhccCCCCccccccccccc--ceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcc
Q 010325 260 HSRVPVYSGN--PKNIIGLLLVKSLLTVRPETETPVSAVSIRR--IPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSK 335 (513)
Q Consensus 260 ~sr~PV~~~~--~d~ivGiV~~kDLl~~~~~~~~~v~dim~~~--~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~ 335 (513)
++++||++++ .++++|+|+.+|++......+.+++++|.++ +++|++++++.++++.|++++.+.+||||++|.++
T Consensus 128 ~s~~pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lv 207 (503)
T 1me8_A 128 HNTVAVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLR 207 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEECCCcCCeEEEEEEHHHHHhhhccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEE
Confidence 9999999864 3799999999999853223356899998776 99999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccccCC
Q 010325 336 TLPPMTDGKKPKLNEAKG 353 (513)
Q Consensus 336 Giv~~T~~dile~i~g~~ 353 (513)
|++ |.+|+++.+....
T Consensus 208 GiI--T~~Dil~~~~~~~ 223 (503)
T 1me8_A 208 YIV--FRKDYDRSQVCHN 223 (503)
T ss_dssp ----------------CC
T ss_pred EEE--EecHHHHhhhccc
Confidence 999 9999999887443
No 62
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.44 E-value=6.9e-14 Score=136.25 Aligned_cols=102 Identities=17% Similarity=0.220 Sum_probs=88.5
Q ss_pred ccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC----------------
Q 010325 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE---------------- 288 (513)
Q Consensus 225 ~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~---------------- 288 (513)
+.+|+|+|++ +++++++++++. ++++.|.+++++++||++++ ++++|+++.+|++.....
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWDSNILAKSATSLDN 81 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHH
Confidence 4689999986 788999999998 99999999999999999865 899999999999853210
Q ss_pred --------------------------------------------------------------------------------
Q 010325 289 -------------------------------------------------------------------------------- 288 (513)
Q Consensus 289 -------------------------------------------------------------------------------- 288 (513)
T Consensus 82 v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 82 ILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp HHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred HHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence
Q ss_pred ---------------------Cccccccccc-ccceeeCCCCCHHHHHHHHHhCCceEEEEEec
Q 010325 289 ---------------------TETPVSAVSI-RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKA 330 (513)
Q Consensus 289 ---------------------~~~~v~dim~-~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE 330 (513)
...+++++|. +++.++++++++.++++.|.+++.+.+||+|+
T Consensus 162 ~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~ 225 (245)
T 3l2b_A 162 KNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDE 225 (245)
T ss_dssp HHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECT
T ss_pred HcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcC
Confidence 0235678887 89999999999999999999999999999993
No 63
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.43 E-value=1.7e-14 Score=155.29 Aligned_cols=146 Identities=13% Similarity=0.196 Sum_probs=23.0
Q ss_pred cccHHHHHHHHHHhhhhhccCCCCC-----hhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCC
Q 010325 186 LFRRAQLKALVTIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGH 260 (513)
Q Consensus 186 ~~s~eeL~~lv~~~~~e~~~~g~L~-----~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~ 260 (513)
..+++|+...+.. ....|.+. +++++++++++++++ +|++ +++++++++++. ++++.+.++++
T Consensus 57 ~vt~~ela~ava~----~GglG~i~~~~~~e~~~~~I~~v~~~~~-----~m~~--~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMAR----EGGLGVIHRNMGIEEQVEQVKRVKRAER-----LIVE--DVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHH----TTCEEEECSSSCHHHHHHHHHHHHTCC------------------------------------
T ss_pred eecHHHHHHHHHh----cCCceeecCCCCHHHHHHHHHhhcchhh-----cccc--CceEECCCCCHH-HHHHHHHHcCC
Confidence 4567888877752 11122343 577899999988754 6884 899999999999 99999999999
Q ss_pred ceeeeeeCCCCcEEEEEEhhhhhccCCCCcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCC
Q 010325 261 SRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPM 340 (513)
Q Consensus 261 sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~ 340 (513)
+++||+++ ++++|+|+.+||+. ..+.+++++|.++++++++++++.++++.|++++.+.+||||++|.++|++
T Consensus 125 ~~~pVvd~--~~lvGivt~~Dl~~---~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGii-- 197 (486)
T 2cu0_A 125 DGLPVVED--EKVVGIITKKDIAA---REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLI-- 197 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEEEEC--CEEEEEEEHHHhcc---CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEE--
Confidence 99999986 89999999999986 345789999888899999999999999999999999999999999999999
Q ss_pred CCCCCccccc
Q 010325 341 TDGKKPKLNE 350 (513)
Q Consensus 341 T~~dile~i~ 350 (513)
|.+|+++.+.
T Consensus 198 T~~Dil~~~~ 207 (486)
T 2cu0_A 198 TMSDLVARKK 207 (486)
T ss_dssp ---------C
T ss_pred EHHHHHHhhh
Confidence 9999998854
No 64
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.43 E-value=1.9e-13 Score=134.74 Aligned_cols=60 Identities=8% Similarity=0.077 Sum_probs=53.8
Q ss_pred cCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCC-CCcEEEEEEhhhhhc
Q 010325 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGN-PKNIIGLLLVKSLLT 284 (513)
Q Consensus 222 ~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~-~d~ivGiV~~kDLl~ 284 (513)
...+++|+|+|++ +++++.+++++. ++.+.|.+++++++||++++ .++++|+|+.+||+.
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~ 69 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEG 69 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHH
Confidence 3567899999996 899999999999 99999999999999999864 257999999999974
No 65
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.40 E-value=3.3e-14 Score=152.98 Aligned_cols=149 Identities=16% Similarity=0.205 Sum_probs=22.8
Q ss_pred ccccHHHHHHHHHHhhhhhccCCCCC-----hhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcC
Q 010325 185 ALFRRAQLKALVTIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARG 259 (513)
Q Consensus 185 ~~~s~eeL~~lv~~~~~e~~~~g~L~-----~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~ 259 (513)
..++++++...+... +.-|.|. ++++++++++. +++++|++ +++++++++++. ++++.|.+++
T Consensus 51 ~tVTe~~lA~ala~~----GGiGvI~~~~~~e~~a~~v~~vk-----~~~~~m~~--~~v~v~~~~tv~-ea~~~m~~~~ 118 (490)
T 4avf_A 51 DTVTEARLAIAMAQE----GGIGIIHKNMGIEQQAAEVRKVK-----KHETAIVR--DPVTVTPSTKII-ELLQMAREYG 118 (490)
T ss_dssp TTTCSHHHHHHHHHH----TSEEEECCSSCHHHHHHHHHHHH-----HCCC-----------------------------
T ss_pred hhhCHHHHHHHHHHc----CCCccccCCCCHHHHHHHhhhhc-----ccccCccc--CceEeCCCCcHH-HHHHHHHHhC
Confidence 346788888877522 1123333 56677888874 46788985 889999999999 9999999999
Q ss_pred CceeeeeeCCCCcEEEEEEhhhhhccCCCCccccccccc-c-cceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccC
Q 010325 260 HSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSI-R-RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTL 337 (513)
Q Consensus 260 ~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~dim~-~-~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Gi 337 (513)
++++||++ + ++++|+|+.+||... ...+.+++++|. + +++++++++++.++++.|++++.+.+||||++|.++|+
T Consensus 119 ~s~~pVvd-~-g~lvGIVt~rDl~~~-~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGi 195 (490)
T 4avf_A 119 FSGFPVVE-Q-GELVGIVTGRDLRVK-PNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGL 195 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEE-C-CEEEEEEEhHHhhhc-cccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEE
Confidence 99999998 3 899999999999743 234578999987 4 68999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccc
Q 010325 338 PPMTDGKKPKLNE 350 (513)
Q Consensus 338 v~~T~~dile~i~ 350 (513)
+ |.+|+++...
T Consensus 196 I--T~~Dil~~~~ 206 (490)
T 4avf_A 196 V--TFRDIEKAKT 206 (490)
T ss_dssp -------------
T ss_pred E--ehHHhhhhcc
Confidence 9 9999988754
No 66
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.22 E-value=1.7e-12 Score=139.73 Aligned_cols=129 Identities=13% Similarity=0.141 Sum_probs=12.2
Q ss_pred HHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCCccc
Q 010325 213 ETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETP 292 (513)
Q Consensus 213 E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~ 292 (513)
.++.+++++. ++++|++ +++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++.. ...+.+
T Consensus 87 ~~~~v~~v~~-----~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~lvGivt~~Dl~~~-~~~~~~ 156 (494)
T 1vrd_A 87 QARQVSIVKK-----TENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDEE-GRLVGLLTNRDVRFE-KNLSKK 156 (494)
T ss_dssp HHHHHHHHHT-----C----------------------------------------------------------------
T ss_pred HHHHHHhhhh-----HhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcCC-CEEEEEEEHHHHHhh-cCCCCc
Confidence 3455666654 5778986 889999999999 99999999999999999865 799999999999863 233568
Q ss_pred ccccccc--cceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCccccccCC
Q 010325 293 VSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKG 353 (513)
Q Consensus 293 v~dim~~--~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dile~i~g~~ 353 (513)
++++|.+ ++++|++++++.++++.|.+++.+.+||||++|.++|++ |..|+++.+....
T Consensus 157 v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiI--t~~Dll~~~~~~~ 217 (494)
T 1vrd_A 157 IKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLI--TIKDIMSVIEHPN 217 (494)
T ss_dssp ------------------------------------------------------CHHHHTCTT
T ss_pred HHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEE--EHHHHHhhhcccc
Confidence 9999887 899999999999999999999999999999999999999 9999988876443
No 67
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.16 E-value=5.4e-12 Score=134.26 Aligned_cols=127 Identities=12% Similarity=0.212 Sum_probs=11.4
Q ss_pred hhHHHHHHHhhcCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCC--CCcEEEEEEhhhhhccCCC
Q 010325 211 HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGN--PKNIIGLLLVKSLLTVRPE 288 (513)
Q Consensus 211 ~~E~~~I~~vl~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~--~d~ivGiV~~kDLl~~~~~ 288 (513)
+++.++++++.+++.- |+ ++.+++.++.++. ++++++.+++++.+||+++. .++++|||+.||+... +
T Consensus 128 e~Qa~~V~~VKr~e~g-----~i--~dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d 197 (556)
T 4af0_A 128 EEQAAMVRRVKKYENG-----FI--TDPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--D 197 (556)
T ss_dssp HHHHHHHHHHHHCCC-----------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcccC-----cc--CCCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--c
Confidence 3567889999887754 44 2788999999999 99999999999999999852 3789999999998753 4
Q ss_pred CcccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCcccc
Q 010325 289 TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLN 349 (513)
Q Consensus 289 ~~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dile~i 349 (513)
...+|+++|..++++++++.+++++.+.|++++...+||||+.|..+|++ |..|+.+..
T Consensus 198 ~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlI--T~kDi~k~~ 256 (556)
T 4af0_A 198 AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLV--ARSDLLKNQ 256 (556)
T ss_dssp -------------------------------------------------------------
T ss_pred cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEE--Eechhhhhh
Confidence 46789999999999999999999999999999999999999999999999 888886543
No 68
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.05 E-value=2e-11 Score=132.16 Aligned_cols=120 Identities=12% Similarity=0.196 Sum_probs=72.3
Q ss_pred ccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCC--CCcEEEEEEhhhhhccCC-CCcccccccccc--cc
Q 010325 227 TAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGN--PKNIIGLLLVKSLLTVRP-ETETPVSAVSIR--RI 301 (513)
Q Consensus 227 ~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~--~d~ivGiV~~kDLl~~~~-~~~~~v~dim~~--~~ 301 (513)
+++++|++ +++++++++++. ++++.|.+++++++||++++ .++++|+|+.+|+..... ....+++++|.+ ++
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~~ 185 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIEL 185 (514)
T ss_dssp TCCTTSCS--SCCCCCC------------------CEESCC--------CCEECTTTTC----------------CCBCC
T ss_pred hhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCCC
Confidence 68899986 788899999999 99999999999999999863 379999999999986421 234678999887 89
Q ss_pred eeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCcccccc
Q 010325 302 PRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEA 351 (513)
Q Consensus 302 ~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dile~i~g 351 (513)
+++++++++.++++.|.+++.+.+||||+.|.++|++ |.+|+++.+..
T Consensus 186 ~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiI--t~~Dll~~~~~ 233 (514)
T 1jcn_A 186 VVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAII--ARTDLKKNRDY 233 (514)
T ss_dssp CCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC------CCCCSSCCCC
T ss_pred eEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEE--EHHHHHHHhhC
Confidence 9999999999999999999999999999999999999 99999988753
No 69
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.49 E-value=1.8e-07 Score=73.58 Aligned_cols=65 Identities=12% Similarity=0.233 Sum_probs=54.5
Q ss_pred cEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC-----Ccccccccccccceee
Q 010325 237 STFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-----TETPVSAVSIRRIPRV 304 (513)
Q Consensus 237 ~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~-----~~~~v~dim~~~~~~V 304 (513)
+++++++++++. ++++.|.+++++.+||.++ ++++|+++.+|++..... .+.+++++|.+++.+|
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 467899999999 9999999999999999975 799999999999753321 2467999998887764
No 70
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.41 E-value=2.9e-08 Score=94.64 Aligned_cols=104 Identities=12% Similarity=0.174 Sum_probs=52.9
Q ss_pred ccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCCcccccccccccce-e
Q 010325 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIP-R 303 (513)
Q Consensus 225 ~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~dim~~~~~-~ 303 (513)
+.+++++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++...... ....+.+.+-.+ .
T Consensus 71 ~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~Dil~~~~~~-~~~~~~~~~l~~~~ 145 (213)
T 1vr9_A 71 DSSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQEPYLPVVDEE-MRLKGAVSLHDFLEALIEA-LAMDVPGIRFSVLL 145 (213)
T ss_dssp TSBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCCCSEEEEECTT-CBEEEEEEHHHHHHHHHHS-CC------------
T ss_pred CCcHHHHccC--CCEEECCCCcHH-HHHHHHHHhCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHH-hcCCCCcEEEEEEe
Confidence 3469999997 788899999998 99999999999999999865 8999999999998753211 112222221111 1
Q ss_pred eCCCCCHHHHHHHHHhCCceEEEEEecCCC
Q 010325 304 VPSDMPLYDILNEFQKGSSHMAAVVKAKGK 333 (513)
Q Consensus 304 Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~ 333 (513)
.....++.++.+.|.+++.+.++|++.+|.
T Consensus 146 ~~~~~~l~~~~~~l~~~~~~~l~V~~~~~~ 175 (213)
T 1vr9_A 146 EDKPGELRKVVDALALSNINILSVITTRSG 175 (213)
T ss_dssp ------------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEEEEecC
Confidence 133445999999999999999999875443
No 71
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.36 E-value=6e-07 Score=69.32 Aligned_cols=63 Identities=13% Similarity=0.223 Sum_probs=53.0
Q ss_pred EEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC-----Cccccccccccccee
Q 010325 238 TFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-----TETPVSAVSIRRIPR 303 (513)
Q Consensus 238 vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~-----~~~~v~dim~~~~~~ 303 (513)
++++++++++. ++++.|.+++++++||+++ ++++|+|+.+|++..... .+.+++++|.+++.+
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~ 69 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVK 69 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTC
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeE
Confidence 57899999998 9999999999999999986 899999999999876422 246788988776654
No 72
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.35 E-value=3.1e-08 Score=109.72 Aligned_cols=128 Identities=14% Similarity=0.038 Sum_probs=92.8
Q ss_pred Cccccccccc--ccceeeCCCCCHHHHHHHHH-hCCceEEEEEecCCCcccCCCCCCCCCccccccCCCCCCCC------
Q 010325 289 TETPVSAVSI--RRIPRVPSDMPLYDILNEFQ-KGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLT------ 359 (513)
Q Consensus 289 ~~~~v~dim~--~~~~~Vpe~~~l~d~L~~m~-~~~~~~a~VVDE~G~~~Giv~~T~~dile~i~g~~~~s~~~------ 359 (513)
.+.+++|+|. +++.++++++++.|+++.|+ +++.+..||+|+.|..+|++ |.+|+++.+.....+....
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiV--t~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAI--SRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEE--SHHHHTTTTTTC-------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEE--EHHHHHHHHHHHhhhcccccccccc
Confidence 3568999998 88999999999999999999 79999999999999999999 9999988765432111000
Q ss_pred ------------------------------------cccc-ccccccCCceEecCCCCCccccccccccccCCCCccccc
Q 010325 360 ------------------------------------APLL-SKQDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGL 402 (513)
Q Consensus 360 ------------------------------------~p~~-~~~~~~~~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl 402 (513)
.|.. ..+.+..++++++.++++.+..+.+..+... .+
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~------~l 602 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPS------MI 602 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCS------EE
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCC------EE
Confidence 0000 1122445567888888888877776654322 23
Q ss_pred cccccccCCCccceecchHHHHHHHh
Q 010325 403 IYASEDIEDGEVIGIITLEDVFEELL 428 (513)
Q Consensus 403 ~~~~~~~e~g~liGIITleDv~eel~ 428 (513)
++. |+|+++||||.+|+++++.
T Consensus 603 pVv----e~G~lvGIVT~~Dll~~~~ 624 (632)
T 3org_A 603 YVT----ERGKLVGIVEREDVAYGYS 624 (632)
T ss_dssp EEE----ETTEEEEEEEGGGTEECCC
T ss_pred EEE----ECCEEEEEEehhhHHHHHh
Confidence 333 6899999999999987654
No 73
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.06 E-value=1.4e-06 Score=93.78 Aligned_cols=117 Identities=13% Similarity=0.073 Sum_probs=77.1
Q ss_pred cccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCccccccCCCCCCCCccccccccccCC
Q 010325 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKTE 371 (513)
Q Consensus 292 ~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dile~i~g~~~~s~~~~p~~~~~~~~~~ 371 (513)
.+.++|..+++++++++++.++++.|.+++...+||+|+.|.++|++ |.+|+.... +.+.+....+.-..+
T Consensus 90 ~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiV--t~rDL~~~~-------~~~~~v~diM~p~~~ 160 (496)
T 4fxs_A 90 IFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGII--TGRDVRFVT-------DLTKSVAAVMTPKER 160 (496)
T ss_dssp HCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEE--EHHHHTTCC-------CTTSBGGGTSEEGGG
T ss_pred ccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEE--EHHHHhhcc-------cCCCcHHHHhcCCCC
Confidence 45667888999999999999999999999999999999999999999 888886221 112222222221235
Q ss_pred ceEecCCCCCccccccccccccCCCCccccccc-cccccCCCccceecchHHHHHHH
Q 010325 372 SVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIY-ASEDIEDGEVIGIITLEDVFEEL 427 (513)
Q Consensus 372 ~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~-~~~~~e~g~liGIITleDv~eel 427 (513)
.++++.+.++.+..+.+....... +++ . ++|+++|+||.+|+++..
T Consensus 161 ~vtv~~~~~l~ea~~~m~~~~i~~------lpVVD----e~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 161 LATVKEGATGAEVQEKMHKARVEK------ILVVN----DEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp CCEEECC----CGGGTCC---CCC------EEEEC----TTSBCCEEECCC-----C
T ss_pred CEEECCCCCHHHHHHHHHHcCCCE------EEEEc----CCCCEEEeehHhHHHHhh
Confidence 688899999888887776543222 333 2 679999999999999864
No 74
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.03 E-value=2e-06 Score=83.13 Aligned_cols=59 Identities=14% Similarity=0.242 Sum_probs=50.1
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhcc
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTV 285 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~ 285 (513)
...+|+++|+| .+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++..
T Consensus 183 ~~~~v~~im~~-~~~~~~~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dll~~ 241 (245)
T 3l2b_A 183 QSLPVDYVMTK-DNLVAVSTDDLVE-DVKVTMSETRYSNYPVIDEN-NKVVGSIARFHLIST 241 (245)
T ss_dssp GGSBHHHHSBC-TTCCCEETTSBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEECC-----
T ss_pred cCCceeeEecC-CccEEECCCCcHH-HHHHHHHhcCCceEEEEcCC-CeEEEEEEHHHhhch
Confidence 46789999997 6899999999998 99999999999999999865 899999999999865
No 75
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.02 E-value=2.9e-06 Score=77.25 Aligned_cols=61 Identities=18% Similarity=0.232 Sum_probs=55.0
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCC
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE 288 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~ 288 (513)
..+.+|+++|++ +++++++++++. ++++.|.++++.++||+++ ++++|+|+.+|++.+...
T Consensus 102 ~~~~~v~~im~~--~~~tv~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 102 GRKLTASAVMTQ--PVVTAAPEDSVG-SIADQMRRHGIHRIPVVQD--GVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp HTTCBHHHHCBC--CSCCBCTTSBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHTTTSCC
T ss_pred ccccchhhhccc--CcccCCcchhHH-HHHHHHHHcCCcEEEEEEC--CEEEEEEEHHHHHHHHHh
Confidence 456789999997 889999999999 9999999999999999984 799999999999986544
No 76
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=97.92 E-value=1.1e-05 Score=68.65 Aligned_cols=59 Identities=22% Similarity=0.314 Sum_probs=52.4
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
...+++++|++ ++.++++++++. ++++.|.+++.+++||++++ ++++|+|+.+|++...
T Consensus 60 ~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Givt~~dl~~~l 118 (122)
T 3kpb_A 60 NKKTIEEIMTR--NVITAHEDEPVD-HVAIKMSKYNISGVPVVDDY-RRVVGIVTSEDISRLF 118 (122)
T ss_dssp TCCBGGGTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred cccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCeEEEECCC-CCEEEEEeHHHHHHHh
Confidence 34489999987 778899999998 99999999999999999865 8999999999998753
No 77
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=97.91 E-value=6.8e-06 Score=73.41 Aligned_cols=59 Identities=22% Similarity=0.326 Sum_probs=53.5
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
..+.+++++|++ +++++++++++. ++++.|.+++++++||++ + ++++|+|+.+|++...
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l 133 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSV 133 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHH
Confidence 357899999997 788899999998 999999999999999998 3 8999999999999754
No 78
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=97.91 E-value=1.4e-05 Score=62.65 Aligned_cols=29 Identities=10% Similarity=0.082 Sum_probs=27.7
Q ss_pred ceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 301 ~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
+++|.+++++.++++.|.+++...+||+|
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d 30 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME 30 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 57899999999999999999999999998
No 79
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=97.84 E-value=1.4e-05 Score=71.83 Aligned_cols=62 Identities=13% Similarity=0.217 Sum_probs=55.5
Q ss_pred cCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCC---cEEEEEEhhhhhcc
Q 010325 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPK---NIIGLLLVKSLLTV 285 (513)
Q Consensus 222 ~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d---~ivGiV~~kDLl~~ 285 (513)
...+.+++++|+++.+++++++++++. ++++.|.+++++++||++++ + +++|+|+.+|++..
T Consensus 77 ~~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~~~vGiit~~dil~~ 141 (159)
T 3fv6_A 77 ELTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQIDALPVIKDT-DKGFEVIGRVTKTNMTKI 141 (159)
T ss_dssp CTTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHTCSEEEEEEEC-SSSEEEEEEEEHHHHHHH
T ss_pred cccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CcceeEEEEEEHHHHHHH
Confidence 346778999999877888999999998 99999999999999999864 5 89999999999864
No 80
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=97.81 E-value=2.7e-05 Score=59.79 Aligned_cols=30 Identities=10% Similarity=0.109 Sum_probs=28.0
Q ss_pred cceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 300 RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 300 ~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
++.++++++++.++++.|++++.+.+||+|
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d 30 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME 30 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 356899999999999999999999999999
No 81
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=97.75 E-value=2.7e-05 Score=66.27 Aligned_cols=60 Identities=23% Similarity=0.325 Sum_probs=53.8
Q ss_pred cCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 222 ~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
.+.+.+++++|++ ++.++++++++. ++++.|.+++++++||+++ ++++|+|+.+|++...
T Consensus 61 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~--~~~~Gvit~~dl~~~l 120 (125)
T 1pbj_A 61 DLAEVKVWEVMER--DLVTISPRATIK-EAAEKMVKNVVWRLLVEED--DEIIGVISATDILRAK 120 (125)
T ss_dssp CTTTSBHHHHCBC--GGGEECTTSCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHH
T ss_pred cccccCHHHHcCC--CCeEECCCCCHH-HHHHHHHhcCCcEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 3467889999997 788899999998 9999999999999999986 8999999999998653
No 82
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.75 E-value=2.9e-05 Score=67.29 Aligned_cols=59 Identities=24% Similarity=0.383 Sum_probs=53.3
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
..+.+++++|++ ++.++++++++. ++++.|.+++++++||++ + ++++|+|+.+|++...
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~ 129 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDA 129 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHH
Confidence 467899999997 788899999998 999999999999999998 4 8999999999998653
No 83
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=97.74 E-value=1.7e-05 Score=69.83 Aligned_cols=60 Identities=18% Similarity=0.396 Sum_probs=52.6
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
..+.+++++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++...
T Consensus 82 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dil~~~ 141 (152)
T 4gqw_A 82 TNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYRRLPVVDSD-GKLVGIITRGNVVRAA 141 (152)
T ss_dssp --CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCCEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred hccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CcEEEEEEHHHHHHHH
Confidence 456789999997 677899999998 99999999999999999855 8999999999999753
No 84
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=97.74 E-value=2.4e-05 Score=67.57 Aligned_cols=57 Identities=23% Similarity=0.360 Sum_probs=51.7
Q ss_pred ccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhcc
Q 010325 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTV 285 (513)
Q Consensus 225 ~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~ 285 (513)
+.+++++|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++..
T Consensus 66 ~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dll~~ 122 (133)
T 2ef7_A 66 ETKAEEFMTA--SLITIREDSPIT-GALALMRQFNIRHLPVVDDK-GNLKGIISIRDITRA 122 (133)
T ss_dssp TCBGGGTSEE--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHH
T ss_pred ccCHHHHcCC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHH
Confidence 5789999986 788899999998 99999999999999999865 799999999999865
No 85
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=97.73 E-value=3.6e-05 Score=68.17 Aligned_cols=39 Identities=26% Similarity=0.303 Sum_probs=36.5
Q ss_pred ccccccccc--cceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 291 TPVSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 291 ~~v~dim~~--~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
.+++++|.+ +++++++++++.++++.|.+++.+.+||+|
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd 68 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICD 68 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEEC
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEEC
Confidence 478899887 899999999999999999999999999999
No 86
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=97.72 E-value=3.7e-05 Score=66.82 Aligned_cols=55 Identities=9% Similarity=0.100 Sum_probs=44.6
Q ss_pred cccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCc
Q 010325 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKP 346 (513)
Q Consensus 290 ~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dil 346 (513)
..+++++|.++++++++++++.++++.|.+++.+.+||+|+.|...|++ |.+|++
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Giv--t~~dl~ 60 (138)
T 2yzi_A 6 KAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFF--TKSDII 60 (138)
T ss_dssp TSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEE--EHHHHH
T ss_pred hhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEE--eHHHHH
Confidence 3578899888999999999999999999999999999999555555555 444443
No 87
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=97.72 E-value=6.5e-05 Score=68.51 Aligned_cols=57 Identities=11% Similarity=0.072 Sum_probs=51.3
Q ss_pred ccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 225 ~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
+.+++++| + +++++++++++. ++++.|.+++..++||++++ ++++|+|+.+|++...
T Consensus 106 ~~~v~~im-~--~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dil~~l 162 (172)
T 3lhh_A 106 RLELVDLV-K--NCNFVPNSLSGM-ELLEHFRTTGSQMVFVVDEY-GDLKGLVTLQDMMDAL 162 (172)
T ss_dssp CCCGGGGC-B--CCEEEETTCCHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred cccHHHHh-c--CCeEeCCCCCHH-HHHHHHHHcCCeEEEEEeCC-CCEEEEeeHHHHHHHH
Confidence 67899999 3 778999999998 99999999999999999865 7999999999999753
No 88
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=97.72 E-value=5.3e-05 Score=69.71 Aligned_cols=60 Identities=12% Similarity=0.169 Sum_probs=53.8
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
..+.+++++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++...
T Consensus 72 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Givt~~dll~~~ 131 (184)
T 1pvm_A 72 PDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGLERCAVVDDP-GRVVGIVTLTDLSRYL 131 (184)
T ss_dssp GGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTCSEEEEECTT-CCEEEEEEHHHHTTTS
T ss_pred cccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHH
Confidence 467789999996 778899999998 99999999999999999865 7999999999998653
No 89
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=97.71 E-value=2.3e-05 Score=67.46 Aligned_cols=56 Identities=9% Similarity=-0.006 Sum_probs=46.9
Q ss_pred cccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCccc
Q 010325 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKL 348 (513)
Q Consensus 290 ~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dile~ 348 (513)
..+++++|.++++++++++++.++++.|.+++.+.+||+|+ |...|++ |.+|+++.
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Giv--t~~dl~~~ 59 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMV--HLSRLLEG 59 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEE--EHHHHHTT
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEE--EHHHHHHH
Confidence 46789999999999999999999999999999999999996 6666666 55555543
No 90
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.71 E-value=4e-05 Score=69.22 Aligned_cols=61 Identities=20% Similarity=0.273 Sum_probs=54.6
Q ss_pred cCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCC
Q 010325 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP 287 (513)
Q Consensus 222 ~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~ 287 (513)
...+.+++++|++ +++++++++++. ++++.|.+++++++||+++ ++++|+|+.+|++....
T Consensus 89 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 89 ASLQQSVSVAMTK--NVVRCQHNSTTD-QLMEIMTGGRFRHVPVEEN--GRLAGIISIGDVVKARI 149 (165)
T ss_dssp GGGTSBGGGTSBS--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHTT
T ss_pred ccccCCHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 3457889999996 788899999998 9999999999999999986 89999999999997654
No 91
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=97.69 E-value=4e-05 Score=66.94 Aligned_cols=59 Identities=12% Similarity=0.169 Sum_probs=52.2
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
..+.+++++|+| ++++++++++. ++++.|.+++...+||++++ ++++|+|+.+|++...
T Consensus 67 ~~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l 125 (136)
T 3lfr_A 67 GDSDDVKKLLRP---ATFVPESKRLN-VLLREFRANHNHMAIVIDEY-GGVAGLVTIEDVLEQI 125 (136)
T ss_dssp GGGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHTTC
T ss_pred CCCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 356789999974 67899999998 99999999999999999865 8999999999999754
No 92
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=97.69 E-value=5.8e-05 Score=66.64 Aligned_cols=56 Identities=16% Similarity=0.207 Sum_probs=50.7
Q ss_pred ccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhcc
Q 010325 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTV 285 (513)
Q Consensus 225 ~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~ 285 (513)
+.+++++| + ++.++++++++. ++++.|.+++..++||++++ ++++|+|+.+|++..
T Consensus 87 ~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~~-g~~~Giit~~dil~~ 142 (148)
T 3lv9_A 87 KIELEEIL-R--DIIYISENLTID-KALERIRKEKLQLAIVVDEY-GGTSGVVTIEDILEE 142 (148)
T ss_dssp CCCGGGTC-B--CCEEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SSEEEEEEHHHHHHH
T ss_pred CccHHHhc-C--CCeEECCCCCHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHH
Confidence 67899999 3 678899999998 99999999999999999865 799999999999864
No 93
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=97.68 E-value=5.5e-05 Score=67.38 Aligned_cols=57 Identities=16% Similarity=0.132 Sum_probs=51.5
Q ss_pred ccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 225 ~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
+.+++++| + ++.++++++++. ++++.|.+++..++||++++ ++++|+|+.+|++...
T Consensus 85 ~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~~-g~~vGivt~~dil~~l 141 (153)
T 3oco_A 85 KAKISTIM-R--DIVSVPENMKVP-DVMEEMSAHRVPMAIVIDEY-GGTSGIITDKDVYEEL 141 (153)
T ss_dssp TSBGGGTC-B--CCEEEETTSBHH-HHHHHHHHTTCSCEEEECTT-SCEEEEECHHHHHHHH
T ss_pred CCcHHHHh-C--CCeEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CCEEEEeeHHHHHHHH
Confidence 67899999 4 788999999998 99999999999999999865 8999999999999753
No 94
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=97.68 E-value=3.5e-05 Score=68.60 Aligned_cols=39 Identities=5% Similarity=-0.081 Sum_probs=36.0
Q ss_pred cccccccc--ccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 291 TPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 291 ~~v~dim~--~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
.+++++|. ++++++++++++.++++.|.+++.+.+||+|
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd 55 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVT 55 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEEC
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEEC
Confidence 46788887 7889999999999999999999999999999
No 95
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=97.67 E-value=7.8e-05 Score=65.14 Aligned_cols=56 Identities=20% Similarity=0.236 Sum_probs=51.0
Q ss_pred ccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhcc
Q 010325 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTV 285 (513)
Q Consensus 225 ~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~ 285 (513)
+.+++++|++ ++.+++++ ++. ++++.|.+++.+++||++++ ++++|+|+.+|++..
T Consensus 70 ~~~v~~~m~~--~~~~v~~~-~l~-~a~~~m~~~~~~~l~Vvd~~-g~~~Giit~~dll~~ 125 (141)
T 2rih_A 70 DGPAMPIANS--PITVLDTD-PVH-VAAEKMRRHNIRHVVVVNKN-GELVGVLSIRDLCFE 125 (141)
T ss_dssp TSBSGGGCBC--CCEEETTS-BHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHSC
T ss_pred CCCHHHHcCC--CCeEEcCC-CHH-HHHHHHHHcCCeEEEEEcCC-CcEEEEEEHHHHHHH
Confidence 6789999986 78899999 998 99999999999999999854 899999999999864
No 96
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.66 E-value=2.9e-05 Score=67.02 Aligned_cols=59 Identities=22% Similarity=0.318 Sum_probs=53.2
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
..+.+++++|++ ++.++++++++. ++++.|.+++++++||+++ ++++|+|+.+|++...
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~--g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 71 PNTATAGELARD--SIYYVDANASIQ-EMLNVMEEHQVRRVPVISE--HRLVGIVTEADIARHL 129 (133)
T ss_dssp TTTSBHHHHHTT--CCCCEETTCCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHTC
T ss_pred ccccCHHHHhcC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 356789999987 788899999998 9999999999999999986 7999999999998754
No 97
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=97.66 E-value=4.3e-05 Score=68.69 Aligned_cols=40 Identities=13% Similarity=0.052 Sum_probs=36.9
Q ss_pred cccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 290 ~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
..+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 4 ~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd 43 (160)
T 2o16_A 4 MIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVD 43 (160)
T ss_dssp CCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred cCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 3578899888899999999999999999999999999999
No 98
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=97.66 E-value=4.6e-05 Score=65.82 Aligned_cols=57 Identities=14% Similarity=0.180 Sum_probs=50.4
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhcc
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTV 285 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~ 285 (513)
.+.+++++|+| ++++++++++. ++++.|.+++..++||++++ ++++|+|+.+|++..
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~pVvd~~-g~~~Giit~~Dil~~ 123 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLN-VLLREFRASRNHLAIVIDEH-GGISGLVTMEDVLEQ 123 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHH-HHHHHHHTSSCCEEEEECC--CCEEEEEEHHHHHHH
T ss_pred CCcCHHHHhCC---CeEeCCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHH
Confidence 46789999974 67899999998 99999999999999999865 799999999999864
No 99
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.65 E-value=3.4e-05 Score=70.04 Aligned_cols=61 Identities=23% Similarity=0.395 Sum_probs=54.2
Q ss_pred cCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 222 ~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
...+.+++++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++...
T Consensus 94 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~~ 154 (180)
T 3sl7_A 94 KTYGKVVGDLMTP--SPLVVRDSTNLE-DAARLLLETKFRRLPVVDAD-GKLIGILTRGNVVRAA 154 (180)
T ss_dssp TTTTCBHHHHSEE--SCCCEETTSBHH-HHHHHHTTSTTCEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred ccccccHHHHhCC--CceEeCCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 4567889999996 678899999998 99999999999999999865 8999999999998653
No 100
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.62 E-value=4.3e-05 Score=68.31 Aligned_cols=59 Identities=24% Similarity=0.348 Sum_probs=52.6
Q ss_pred cCcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhcc
Q 010325 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTV 285 (513)
Q Consensus 222 ~l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~ 285 (513)
...+.+++++|++ ++++++++++. ++++.|.++++.++||++++ ++++|+|+.+|++..
T Consensus 92 ~~~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dll~~ 150 (157)
T 1o50_A 92 RLIAKNASEIMLD---PVYVHMDTPLE-EALKLMIDNNIQEMPVVDEK-GEIVGDLNSLEILLA 150 (157)
T ss_dssp CCSSCBHHHHCBC---CCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHH
T ss_pred HHcCCcHHHHcCC---CeEECCCCCHH-HHHHHHHHCCCcEEEEEcCC-CEEEEEEEHHHHHHH
Confidence 3467889999996 77899999998 99999999999999999854 799999999999865
No 101
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.61 E-value=5.3e-06 Score=89.55 Aligned_cols=120 Identities=16% Similarity=0.055 Sum_probs=58.1
Q ss_pred cccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEec---CCCcccCCCCCCCCCccccccCCCCCCCCccccccccc
Q 010325 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKA---KGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDE 368 (513)
Q Consensus 292 ~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE---~G~~~Giv~~T~~dile~i~g~~~~s~~~~p~~~~~~~ 368 (513)
.+.++|.++++++++++++.++++.|.+++.+.+||+|+ .|..+|++ |.+|+.... + ...+.|....+..
T Consensus 109 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiV--t~~Dl~~~~-~----~~~~~~v~~vm~~ 181 (514)
T 1jcn_A 109 NFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIV--TSRDIDFLA-E----KDHTTLLSEVMTP 181 (514)
T ss_dssp TCCTTSCSSCCCCCC-----------------CEESCC--------CCEE--CTTTTC---------------------C
T ss_pred hhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEE--EHHHHHhhh-h----ccCCCCHHHHhCC
Confidence 466788888999999999999999999999999999998 59999999 999987631 0 0111222222222
Q ss_pred cCCceEecCCCCCccccccccccccCCCCccccccc-cccccCCCccceecchHHHHHHHh
Q 010325 369 KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIY-ASEDIEDGEVIGIITLEDVFEELL 428 (513)
Q Consensus 369 ~~~~~~vd~~~~i~~~~~~~~~~l~~~~~t~~gl~~-~~~~~e~g~liGIITleDv~eel~ 428 (513)
......++.+.++.+..+.+..... ..+++ . ++|+++|+||.+|+++.+.
T Consensus 182 ~~~~~tv~~~~~l~ea~~~m~~~~~------~~lpVVd----~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 182 RIELVVAPAGVTLKEANEILQRSKK------GKLPIVN----DCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp CBCCCCEETTCCSTTTTTHHHHHTC------SCCCEES----SSSCCC----CCCCSSCCC
T ss_pred CCCCeEECCCCCHHHHHHHHHHcCC------CcccEEC----CCCeEEEEEEHHHHHHHhh
Confidence 2256788888888877776654322 12233 2 5789999999999987654
No 102
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.59 E-value=8.9e-05 Score=65.84 Aligned_cols=59 Identities=14% Similarity=0.290 Sum_probs=52.0
Q ss_pred ccccccccccC----ccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhcc
Q 010325 225 EKTAEEAMTPI----ESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTV 285 (513)
Q Consensus 225 ~~~V~dIMtPr----~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~ 285 (513)
+.+++++|.++ .++.++++++++. ++++.|.+++.+++||++++ ++++|+|+.+|++..
T Consensus 86 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~ 148 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEVHRLVVVDEN-DVVKGIVSLSDILQA 148 (152)
T ss_dssp TSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHH
T ss_pred cchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCCeEEEEECCC-CeEEEEEEHHHHHHH
Confidence 56799999743 4788999999998 99999999999999999864 799999999999865
No 103
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.59 E-value=6.4e-05 Score=65.15 Aligned_cols=40 Identities=10% Similarity=0.106 Sum_probs=36.9
Q ss_pred cccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 290 ~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
+.+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 7 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 46 (138)
T 2p9m_A 7 NIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVID 46 (138)
T ss_dssp TCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEEC
T ss_pred cCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEEC
Confidence 3578899888899999999999999999999999999999
No 104
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=97.56 E-value=9.3e-05 Score=65.26 Aligned_cols=57 Identities=16% Similarity=0.266 Sum_probs=50.6
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhcc
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTV 285 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~ 285 (513)
..+.+++++|++ ++.++++++++. ++++.|.++++ +||++++ ++++|+|+.+|++..
T Consensus 84 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~--l~Vvd~~-g~~~Giit~~dil~~ 140 (150)
T 3lqn_A 84 LEEMKVEQVMKQ--DIPVLKLEDSFA-KALEMTIDHPF--ICAVNED-GYFEGILTRRAILKL 140 (150)
T ss_dssp GGGCBGGGTCBS--SCCEEETTCBHH-HHHHHHHHCSE--EEEECTT-CBEEEEEEHHHHHHH
T ss_pred HhcCCHHHHhcC--CCceeCCCCCHH-HHHHHHHhCCE--EEEECCC-CcEEEEEEHHHHHHH
Confidence 357789999996 788999999998 99999999887 9999855 899999999999865
No 105
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=97.56 E-value=9.4e-05 Score=63.85 Aligned_cols=57 Identities=12% Similarity=0.195 Sum_probs=50.6
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhcc
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTV 285 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~ 285 (513)
.+.+++++|+ ++.++++++++. ++++.|.+++..++||++++ ++++|+|+.+|++..
T Consensus 70 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~~vGivt~~dil~~ 126 (130)
T 3i8n_A 70 GQKQLGAVMR---PIQVVLNNTALP-KVFDQMMTHRLQLALVVDEY-GTVLGLVTLEDIFEH 126 (130)
T ss_dssp TTSBHHHHSE---ECCEEETTSCHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHH
T ss_pred CcCCHHHHhc---CCcCcCCCCcHH-HHHHHHHHcCCeEEEEEcCC-CCEEEEEEHHHHHHH
Confidence 3668999996 467899999998 99999999999999999865 899999999999864
No 106
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=97.56 E-value=6.3e-05 Score=64.69 Aligned_cols=58 Identities=9% Similarity=0.183 Sum_probs=51.1
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
.+.+++++|+| ++++++++++. ++++.|.+++..++||++++ ++++|+|+.+|++...
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 67 EAFSMDKVLRT---AVVVPESKRVD-RMLKEFRSQRYHMAIVIDEF-GGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCHHHHCBC---CCEEETTCBHH-HHHHHHHHTTCCEEEEECTT-SCEEEEEEHHHHHHHC
T ss_pred CCCCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 56789999964 56899999998 99999999999999999865 7999999999998653
No 107
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.55 E-value=7.8e-05 Score=66.23 Aligned_cols=57 Identities=16% Similarity=0.050 Sum_probs=45.9
Q ss_pred cccccccccc--cceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCCCCCCCCCccc
Q 010325 290 ETPVSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKL 348 (513)
Q Consensus 290 ~~~v~dim~~--~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv~~T~~dile~ 348 (513)
..+++++|.+ +++++++++++.++++.|.+++.+.+||+|+.|..+|++ |.+|+++.
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Giv--t~~dl~~~ 68 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLI--SMTMMMDA 68 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEE--EHHHHHHH
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEe--eHHHHHHH
Confidence 3578898875 888999999999999999999999999999666666666 55554443
No 108
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.53 E-value=7.9e-05 Score=66.49 Aligned_cols=40 Identities=15% Similarity=0.210 Sum_probs=37.4
Q ss_pred cccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 290 ~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
..+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd 51 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVE 51 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEES
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEe
Confidence 4678899988999999999999999999999999999998
No 109
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.53 E-value=4.1e-05 Score=82.42 Aligned_cols=101 Identities=12% Similarity=0.168 Sum_probs=19.9
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCCccccccccc--ccc
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSI--RRI 301 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~dim~--~~~ 301 (513)
.+.+|+++|+|..+++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++....... ...+.+. ...
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~~~-~~~d~~~~l~v~ 235 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKKLNALPIIDDD-QHLRYIVFRKDYDRSQVCHN-ELVDSQKRYLVG 235 (503)
T ss_dssp -----------------------------------------------------------------CC-CCBCTTSCBCCE
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEecHHHHhhhccc-chhccccccccc
Confidence 4568999999866699999999999 99999999999999999865 89999999999997643221 1122111 111
Q ss_pred eeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 302 PRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 302 ~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
..++. ....+.++.|.+.+.+.+ ++|
T Consensus 236 a~v~~-~~~~e~~~~l~e~gv~~l-~Vd 261 (503)
T 1me8_A 236 AGINT-RDFRERVPALVEAGADVL-CID 261 (503)
T ss_dssp EEECS-SSHHHHHHHHHHHTCSEE-EEC
T ss_pred cccCc-hhHHHHHHHHHhhhccce-EEe
Confidence 23455 666777888888888865 444
No 110
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.52 E-value=8.2e-05 Score=64.48 Aligned_cols=57 Identities=18% Similarity=0.166 Sum_probs=49.9
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhcc
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTV 285 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~ 285 (513)
...+++++|. ++.++++++++. ++++.|.+++...+||++++ ++++|+|+.+|++..
T Consensus 68 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~ 124 (130)
T 3hf7_A 68 TKEIMLRAAD---EIYFVPEGTPLS-TQLVKFQRNKKKVGLVVDEY-GDIQGLVTVEDILEE 124 (130)
T ss_dssp CHHHHHHHSB---CCCEEETTCBHH-HHHHHHHHHCCCEEEEECTT-SCEEEEEEHHHHHHH
T ss_pred chhhHHHhcc---CCeEeCCCCcHH-HHHHHHHhcCCeEEEEEcCC-CCEEEEeeHHHHHHH
Confidence 3457889994 567899999998 99999999999999999865 899999999999865
No 111
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=97.49 E-value=9.5e-05 Score=66.65 Aligned_cols=38 Identities=5% Similarity=-0.074 Sum_probs=34.1
Q ss_pred ccccccc--ccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 292 PVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 292 ~v~dim~--~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
.++++|+ .++.+|++++++.+|++.|.+++...+||+|
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd 55 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVT 55 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEEC
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEc
Confidence 4667775 5688999999999999999999999999999
No 112
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.49 E-value=7.2e-05 Score=66.89 Aligned_cols=49 Identities=18% Similarity=0.149 Sum_probs=40.4
Q ss_pred cccccccccc--cceeeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCC
Q 010325 290 ETPVSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLP 338 (513)
Q Consensus 290 ~~~v~dim~~--~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv 338 (513)
..+++++|.+ +++++++++++.++++.|.+++.+.+||+|+.|.++|++
T Consensus 13 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGiv 63 (159)
T 1yav_A 13 EATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLI 63 (159)
T ss_dssp TCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEE
T ss_pred HhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEe
Confidence 3578888877 789999999999999999999999999999444444444
No 113
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.48 E-value=9.4e-05 Score=69.93 Aligned_cols=60 Identities=15% Similarity=0.202 Sum_probs=53.6
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
..+.+++++|++ +++++++++++. ++++.|.+++...+||++++ ++++|+|+..|++...
T Consensus 113 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVD~~-g~lvGiIT~~Dil~~i 172 (205)
T 3kxr_A 113 EPHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSREIELPVIDDA-GELIGRVTLRAATALV 172 (205)
T ss_dssp CTTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSSCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred CCcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEcCC-CeEEEEEEHHHHHHHH
Confidence 356789999986 788999999998 99999999999999999865 8999999999998653
No 114
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.48 E-value=8.5e-05 Score=66.49 Aligned_cols=55 Identities=9% Similarity=0.145 Sum_probs=49.6
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhh
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLL 283 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl 283 (513)
.+.+++++|+| ++++++++++. ++++.|.+++..++||++++ ++++|+|+.+|++
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQRNHMAIVIDEY-GGTSGLVTFEDII 155 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTTCCEEEEECTT-SSEEEEEEHHHHC
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcCCeEEEEECCC-CCEEEEEEHHHhc
Confidence 46789999975 67899999998 99999999999999999865 7999999999986
No 115
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.47 E-value=0.00013 Score=63.48 Aligned_cols=39 Identities=10% Similarity=0.384 Sum_probs=34.8
Q ss_pred ccccc---cccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 291 TPVSA---VSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 291 ~~v~d---im~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
.++++ +|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 8 ~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 49 (144)
T 2nyc_A 8 IPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID 49 (144)
T ss_dssp SBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred cchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEc
Confidence 45666 6778889999999999999999999999999999
No 116
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.44 E-value=0.00014 Score=71.19 Aligned_cols=40 Identities=15% Similarity=0.277 Sum_probs=37.9
Q ss_pred cccccccccccceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 290 ~~~v~dim~~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
...++++|.+++++|.+++++.++.+.|.+++.+.+||||
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd 51 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVD 51 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEES
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEe
Confidence 4678999999999999999999999999999999999999
No 117
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.43 E-value=0.00022 Score=76.85 Aligned_cols=112 Identities=18% Similarity=0.165 Sum_probs=83.3
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCCcccccccccccce
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIP 302 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~dim~~~~~ 302 (513)
-.+.+++++|++ .++++++++.++. ++++.|.+++...+||+|++ ++++|+|+.+|++...... ....+.+.+-.+
T Consensus 172 ~~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i~~lpVVDe~-g~l~GiIT~~Dil~~~~~p-~a~~D~~~rl~V 247 (511)
T 3usb_A 172 DYSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKIEKLPLVDNN-GVLQGLITIKDIEKVIEFP-NSAKDKQGRLLV 247 (511)
T ss_dssp CSSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHHCT-TCCBCTTSCBCC
T ss_pred cCCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEeCC-CCEeeeccHHHHHHhhhcc-cchhhhccceee
Confidence 356789999997 6888999999998 99999999999999999865 8999999999999754321 223333323222
Q ss_pred --eeCCCCCHHHHHHHHHhCCceEEEEEecCCCcccCC
Q 010325 303 --RVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLP 338 (513)
Q Consensus 303 --~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~G~~~Giv 338 (513)
.+.......+.++.+.+.+.+.+.|-...|...|++
T Consensus 248 ~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~ 285 (511)
T 3usb_A 248 GAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVI 285 (511)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHH
T ss_pred eeeeeeccchHHHHHHHHhhccceEEecccccchhhhh
Confidence 344455567778888899999887766555444443
No 118
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.40 E-value=0.00019 Score=65.80 Aligned_cols=56 Identities=9% Similarity=0.089 Sum_probs=44.1
Q ss_pred ccccccccc--ccceeeCCCCCHHHHHHHHHhCCceEEEEEecC-CCcccCCCCCCCCCcc
Q 010325 290 ETPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAK-GKSKTLPPMTDGKKPK 347 (513)
Q Consensus 290 ~~~v~dim~--~~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE~-G~~~Giv~~T~~dile 347 (513)
..+++++|. ++++++++++++.++++.|.+++...+||+|+. |.++|++ |.+|++.
T Consensus 35 ~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGiv--t~~Dl~~ 93 (173)
T 3ocm_A 35 ERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIG--RAKDLVA 93 (173)
T ss_dssp TSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEE--EHHHHHH
T ss_pred CCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEE--EHHHHHH
Confidence 467899985 468899999999999999999999999999954 4555555 4444443
No 119
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.32 E-value=0.00018 Score=65.54 Aligned_cols=59 Identities=14% Similarity=0.170 Sum_probs=52.8
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
..+.+++++|++ ++.++++++++. ++++.|.+++++++||++ + ++++|+|+.+|++...
T Consensus 105 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~l~Vvd-~-g~~vGiit~~dll~~l 163 (185)
T 2j9l_A 105 PPTLKLRNILDL--SPFTVTDLTPME-IVVDIFRKLGLRQCLVTH-N-GRLLGIITKKDVLKHI 163 (185)
T ss_dssp CCCEECGGGEES--SCCEEETTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred ccCccHHHhhCc--CCeEeCCCCCHH-HHHHHHHhCCCcEEEEEE-C-CEEEEEEEHHHHHHHH
Confidence 456789999986 788999999998 999999999999999998 3 8999999999998753
No 120
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.17 E-value=0.00028 Score=69.65 Aligned_cols=61 Identities=16% Similarity=0.294 Sum_probs=54.0
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCC
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP 287 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~ 287 (513)
..+.+++++|++ +++++++++++. ++++.|.+++...+||++++ ++++|+|+..|++....
T Consensus 196 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 196 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp CTTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHC-
T ss_pred CCCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCCCEEEEEeCC-CeEEEEEEHHHHHHHHH
Confidence 357889999986 788999999998 99999999999999999865 89999999999997643
No 121
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.02 E-value=0.00038 Score=69.15 Aligned_cols=60 Identities=15% Similarity=0.280 Sum_probs=53.6
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
..+.+++++|++ +++++++++++. ++++.|.+++..++||++++ ++++|+|+..|++...
T Consensus 198 ~~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIT~~Dil~~i 257 (286)
T 2oux_A 198 DDDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYDFLAVPVTDYD-DHLLGIVTVDDIIDVI 257 (286)
T ss_dssp CTTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred CCCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHH
Confidence 357789999986 788899999998 99999999999999999865 8999999999998653
No 122
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.88 E-value=0.00068 Score=72.65 Aligned_cols=102 Identities=15% Similarity=0.138 Sum_probs=17.1
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCCccccccccc--ccc
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSI--RRI 301 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~dim~--~~~ 301 (513)
.+.+++++|+|+.++++++++.++. ++++.|.+++...+||++++ ++++|+|+.+|++....... ...+..- +-.
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~p~-a~kd~~grl~v~ 221 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLE-EMKAKLYENRIEKMLVVDEN-FYLRGLVTFRDIEKAKTYPL-ASKDEQGRLRVG 221 (490)
T ss_dssp ----------------------------------------------------------------CTT-CCBCTTSCBCCE
T ss_pred cCCcHHHHhccCCCCEEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEehHHhhhhccCcc-hhhhccCcceee
Confidence 4568999999866799999999999 99999999999999999865 89999999999997542211 1111100 111
Q ss_pred eeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 302 PRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 302 ~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
..+-......+.++.+.+.+...+ ++|
T Consensus 222 aavG~~~~~~~~a~~l~~aG~d~I-~id 248 (490)
T 4avf_A 222 AAVGTGADTGERVAALVAAGVDVV-VVD 248 (490)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEE-EEE
T ss_pred eeeccccchHHHHHHHhhcccceE-Eec
Confidence 124444445666677777777644 445
No 123
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=96.86 E-value=0.00071 Score=73.05 Aligned_cols=59 Identities=8% Similarity=0.061 Sum_probs=48.5
Q ss_pred cccccccccccceeeCCC-CCHHHHHHHHHhCCceEEEEEe-cCCCcccCCCCCCCCCccccc
Q 010325 290 ETPVSAVSIRRIPRVPSD-MPLYDILNEFQKGSSHMAAVVK-AKGKSKTLPPMTDGKKPKLNE 350 (513)
Q Consensus 290 ~~~v~dim~~~~~~Vpe~-~~l~d~L~~m~~~~~~~a~VVD-E~G~~~Giv~~T~~dile~i~ 350 (513)
..+|+++|.+++++|+++ +++.++++.|.+++.+.+||+| +.|.++|++ |.+|+++.+.
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiV--t~~Dll~~l~ 443 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVV--GQETLITQIV 443 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEE--EHHHHHHHHH
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEE--EHHHHHHHHH
Confidence 367999999999999999 9999999999999999999999 666666666 5556555443
No 124
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=96.78 E-value=0.0009 Score=71.35 Aligned_cols=60 Identities=17% Similarity=0.302 Sum_probs=54.0
Q ss_pred CcccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccC
Q 010325 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (513)
Q Consensus 223 l~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~ 286 (513)
-.+.+++++|++ ++++++++++++ ++.+.|.+++...+||++++ ++++|+|+.+|++...
T Consensus 216 ~~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVDe~-g~lvGiIT~~Dil~~i 275 (473)
T 2zy9_A 216 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVL 275 (473)
T ss_dssp CTTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred CCCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcCCcEEEEEcCC-CEEEEEEehHhhHHHH
Confidence 367899999986 788999999998 99999999999999999865 8999999999998653
No 125
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.60 E-value=0.0011 Score=70.84 Aligned_cols=101 Identities=16% Similarity=0.262 Sum_probs=22.2
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCCcccccccccccce-
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIP- 302 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~dim~~~~~- 302 (513)
.+.+++++|+++.+++++++++++. ++++.|.+++..++||++++ ++++|+|+.+|++...... ...++...+-.+
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~~~~-~~~~D~~~~l~vg 229 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLE-KAKEILHQHRIEKLPLVSKD-NKLVGLITIKDIMSVIEHP-NAARDEKGRLLVG 229 (494)
T ss_dssp ----------------------------------------------------------CHHHHTCT-TCCBCTTSCBCCE
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHhhhccc-cccccchhhhccc
Confidence 4568999999877899999999999 99999999999999999865 8999999999999754321 111121001011
Q ss_pred -eeCCCCCHHHHHHHHHhCCceEEEE
Q 010325 303 -RVPSDMPLYDILNEFQKGSSHMAAV 327 (513)
Q Consensus 303 -~Vpe~~~l~d~L~~m~~~~~~~a~V 327 (513)
-+.......+.+..+.+.+...+.+
T Consensus 230 a~ig~~~~~~~~a~~l~~aGvd~v~i 255 (494)
T 1vrd_A 230 AAVGTSPETMERVEKLVKAGVDVIVI 255 (494)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred cccCcCHhHHHHHHHHHHhCCCEEEE
Confidence 2344456677888888887776544
No 126
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.43 E-value=0.0017 Score=69.38 Aligned_cols=104 Identities=17% Similarity=0.284 Sum_probs=20.3
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCCcccccc----cccc
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSA----VSIR 299 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~d----im~~ 299 (513)
.+.+++++|++ ++++++++.++. ++++.|.+++...+||++++ ++++|+++.+|++....... ...+ ++..
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~~~~lpVVde~-g~lvGiiT~~Dil~~~~~~~-~~~~~~g~~~v~ 222 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVE-EALKIMIENRIDRLPVVDER-GKLVGLITMSDLVARKKYKN-AVRDENGELLVA 222 (486)
T ss_dssp ---------------------------------------------------------------CCTT-CCBCTTSCBCCE
T ss_pred CCCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcCCCEEEEEecC-CeEEEEEEHHHHHHhhhccc-cccccCCceeec
Confidence 45689999986 788999999999 99999999999999999865 78999999999997643211 1111 1111
Q ss_pred cceeeCCCCCHHHHHHHHHhCCceEEEEEec-CCCcccC
Q 010325 300 RIPRVPSDMPLYDILNEFQKGSSHMAAVVKA-KGKSKTL 337 (513)
Q Consensus 300 ~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVDE-~G~~~Gi 337 (513)
. .++. .+ .+.+..+.+.+.... |+|. .|...+.
T Consensus 223 ~--~~~~-~~-~~~a~~l~~~gvd~l-vvdta~G~~~~~ 256 (486)
T 2cu0_A 223 A--AVSP-FD-IKRAIELDKAGVDVI-VVDTAHAHNLKA 256 (486)
T ss_dssp E--EECT-TC-HHHHHHHHHTTCSEE-EEECSCCCCHHH
T ss_pred c--eech-hh-HHHHHHHHHhcCCce-EEEecCCcEeeh
Confidence 1 2333 23 556777888888765 5663 4444443
No 127
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.32 E-value=0.0016 Score=69.51 Aligned_cols=99 Identities=14% Similarity=0.166 Sum_probs=16.1
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCCcc-cc---cccccc
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETET-PV---SAVSIR 299 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~-~v---~dim~~ 299 (513)
.+..|+++||+ ++++++.+.+++ |+.+++.+++...+||++++ ++++|+|+.+|+++....... .+ ..+...
T Consensus 198 ~~~~V~evMT~--~lvt~~~~~~le-eA~~iL~~~kieklpVVd~~-g~LvGlIT~kDi~k~~~~p~A~k~d~~grL~Vg 273 (556)
T 4af0_A 198 AETPIKSVMTT--EVVTGSSPITLE-KANSLLRETKKGKLPIVDSN-GHLVSLVARSDLLKNQNYPYASKVPESKQLYCG 273 (556)
T ss_dssp ----------------------------------------------------------------CTTCCBCTTTCCBCCE
T ss_pred cceEhhhhccc--ceEEecCCCCHH-HHHHHHHHccccceeEEccC-CcEEEEEEechhhhhhhCCcchhcchhhceeeE
Confidence 35689999997 799999999999 99999999999999999876 899999999999875321110 00 111111
Q ss_pred cceeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 300 RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 300 ~~~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
-. |--...-.+-+..+.+.+..++ |+|
T Consensus 274 AA--Vgv~~d~~eR~~aLv~AGvD~i-viD 300 (556)
T 4af0_A 274 AA--IGTRPGDKDRLKLLAEAGLDVV-VLD 300 (556)
T ss_dssp EE--ECSSHHHHHHHHHHHHTTCCEE-EEC
T ss_pred EE--eccCccHHHHHHHHHhcCCcEE-EEe
Confidence 12 2222234555666777787765 556
No 128
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=95.91 E-value=0.018 Score=61.29 Aligned_cols=101 Identities=15% Similarity=0.176 Sum_probs=69.8
Q ss_pred cccccccccccCccEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEhhhhhccCCCCccccccccccc--c
Q 010325 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRR--I 301 (513)
Q Consensus 224 ~~~~V~dIMtPr~~vv~v~~d~sl~~eal~~i~~~~~sr~PV~~~~~d~ivGiV~~kDLl~~~~~~~~~v~dim~~~--~ 301 (513)
.+.+++++|++ .++++++.++++. ++++.|.+++..++||++++ ++++|+++.+|++....... ...+...+- .
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVd~~-g~lvGivt~~Dil~~~~~~~-~~~d~~~~~~vg 225 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHRIEKLPLVDNS-GRLSGLITIKDIEKVIEFPH-AAKDEFGRLLVA 225 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTTCSEEEEECTT-SBEEEEEEHHHHHHHHHCTT-CCBCTTSCBCCE
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEEHHHHHHHHhccc-cccCcCCcEEEE
Confidence 57789999985 2677899999998 99999999999999999865 89999999999997543211 111111011 1
Q ss_pred eeeCCCCCHHHHHHHHHhCCceEEEEEe
Q 010325 302 PRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (513)
Q Consensus 302 ~~Vpe~~~l~d~L~~m~~~~~~~a~VVD 329 (513)
..+.......+.++.+.+.+...+ +++
T Consensus 226 ~~i~~~~~~~~~a~~l~~~G~d~i-vi~ 252 (491)
T 1zfj_A 226 AAVGVTSDTFERAEALFEAGADAI-VID 252 (491)
T ss_dssp EEECSSTTHHHHHHHHHHHTCSEE-EEC
T ss_pred EeccCchhHHHHHHHHHHcCCCeE-EEe
Confidence 124443444555666666676665 455
No 129
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=90.85 E-value=0.053 Score=43.22 Aligned_cols=47 Identities=23% Similarity=0.190 Sum_probs=40.3
Q ss_pred cccccCCceEecCCCCCccccccccccccCC-CCccccccc-cccccCC
Q 010325 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY-ASEDIED 411 (513)
Q Consensus 365 ~~~~~~~~~~vd~~~~i~~~~~~~~~~l~~~-~~t~~gl~~-~~~~~e~ 411 (513)
+.+..++.|.+++.++++++++.+...++.+ +.|++||+. ...+++.
T Consensus 3 i~~~~dg~~~v~g~~~l~dl~~~l~~~l~~~~~~Tl~G~i~~~lg~iP~ 51 (81)
T 3lae_A 3 AIQQSDGSMIIDGSANLRDLNKMFNWELDTEDARTFNGLILEHLEEIPD 51 (81)
T ss_dssp EEECTTSCEEEETTCBHHHHHHHHCCCCCCSSCSBHHHHHHHHCSSCCC
T ss_pred cEEeCCCEEEEEeeCCHHHHHHHhCCCCCCCCCccHHHHHHHHhCCCCC
Confidence 4556788999999999999999999999876 899999998 6667664
No 130
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=90.70 E-value=0.048 Score=43.67 Aligned_cols=47 Identities=15% Similarity=0.049 Sum_probs=40.2
Q ss_pred cccccCCceEecCCCCCccccccccccccCC-CCccccccc-cccccCC
Q 010325 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY-ASEDIED 411 (513)
Q Consensus 365 ~~~~~~~~~~vd~~~~i~~~~~~~~~~l~~~-~~t~~gl~~-~~~~~e~ 411 (513)
+.+..++.|.+++.++++++++.+...++.+ +.|++||++ ...++|.
T Consensus 3 i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~~Tl~G~i~~~lg~iP~ 51 (83)
T 3llb_A 3 IKPLPSGDFIVKALTPVDAFNDFFGSEFSDEEFDTVGGLVMSAFGHLPK 51 (83)
T ss_dssp EEECTTSCEEEETTCBHHHHHHHHCCCCCTTTCSBHHHHHHHHHSSCCC
T ss_pred eEEeCCCEEEEEccCCHHHHHHHhCCCCCCCCCcCHHHHHHHHhCcCCC
Confidence 3456788999999999999999999999876 899999998 6677764
No 131
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=90.64 E-value=0.04 Score=44.52 Aligned_cols=48 Identities=13% Similarity=0.045 Sum_probs=40.5
Q ss_pred ccccCCceEecCCCCCccccccccccccCC-CCccccccc-cccccCC-Cc
Q 010325 366 QDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY-ASEDIED-GE 413 (513)
Q Consensus 366 ~~~~~~~~~vd~~~~i~~~~~~~~~~l~~~-~~t~~gl~~-~~~~~e~-g~ 413 (513)
.+..++.|.+++.+++++++..++..++.+ +.|++||++ .+.++|. |+
T Consensus 3 ~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~dTl~G~v~~~lg~iP~~Gd 53 (87)
T 2rk5_A 3 REIADNTYIVLGTMTLNDFNEYFETDLESDNVDTIAGFYLTGVGTIPSQEE 53 (87)
T ss_dssp EEEETTEEEEETTSBHHHHHHHHTCCCCCTTCCBHHHHHHHHHCSCCCSSS
T ss_pred EEeCCCEEEEEccCCHHHHHHHhCCCCCCCCcccHHHHHHHHhCcCCCCCC
Confidence 445678899999999999999999999875 999999998 6777764 44
No 132
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=89.56 E-value=0.06 Score=43.88 Aligned_cols=50 Identities=12% Similarity=0.082 Sum_probs=42.3
Q ss_pred ccccccCCceEecCCCCCccccccccccccCC-CCccccccc-cccccCC-Cc
Q 010325 364 SKQDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY-ASEDIED-GE 413 (513)
Q Consensus 364 ~~~~~~~~~~~vd~~~~i~~~~~~~~~~l~~~-~~t~~gl~~-~~~~~e~-g~ 413 (513)
.+.+...+.|.|++.+++.++++.+...++.. +.|++||++ ...++|. |+
T Consensus 11 ~i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~dTlgG~i~~~lg~iP~~Ge 63 (91)
T 2pli_A 11 NIHAVSSERWRIHAATEIEDINTFFGTEYSSEEADTIGGLVIQELGHLPVRGE 63 (91)
T ss_dssp SEEEEETTEEEEETTCBHHHHHHHHCCCCCCSSCCBHHHHHHHHHSSCCCTTC
T ss_pred ceEEeCCCEEEEEcCCCHHHHHHHhCCCCCCCCCccHHHHHHHHhCCCCCCCC
Confidence 35566788999999999999999999999865 999999998 6777765 44
No 133
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=89.39 E-value=0.065 Score=43.97 Aligned_cols=50 Identities=16% Similarity=0.074 Sum_probs=38.8
Q ss_pred ccccccCCceEecCCCCCccccccccccccC---C-CCccccccc-cccccCC-Cc
Q 010325 364 SKQDEKTESVVVDVDRPLSSGSMNRLSSSQR---S-DSTTNGLIY-ASEDIED-GE 413 (513)
Q Consensus 364 ~~~~~~~~~~~vd~~~~i~~~~~~~~~~l~~---~-~~t~~gl~~-~~~~~e~-g~ 413 (513)
.+.+...+.|.|++.++++++++.+...++. . +.|++||++ ...++|. |+
T Consensus 11 ~i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~~~~dTlgG~i~~~lg~iP~~Gd 66 (94)
T 2oai_A 11 LMVTREDGSFLIDGTLPIEELREVLGAELPDGEENNYHTLAGMCISYFGRIPHVGE 66 (94)
T ss_dssp SEEECTTSCEEEETTCBHHHHHHHHTC-------CCCSBHHHHHHHHHSSCCCTTC
T ss_pred CeEEeCCCeEEEeccCCHHHHHHHhCCCCCcccCCCCccHHHHHHHHhCCCCCCCC
Confidence 3556778899999999999999999999986 4 999999998 6777765 44
No 134
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=89.31 E-value=0.062 Score=43.92 Aligned_cols=47 Identities=15% Similarity=0.011 Sum_probs=40.8
Q ss_pred cccccCCceEecCCCCCccccccccccccCC-CCccccccc-cccccCC
Q 010325 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY-ASEDIED 411 (513)
Q Consensus 365 ~~~~~~~~~~vd~~~~i~~~~~~~~~~l~~~-~~t~~gl~~-~~~~~e~ 411 (513)
+.+..++.|.|++.+++.++++.++..++.. +.|++||++ .+.+++.
T Consensus 10 i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~~TlgG~i~~~lg~iP~ 58 (93)
T 2r2z_A 10 YTQVADNEYLVQGRMLIDEFNEVFETDLHMSDVDTMAGYLITALGTIPD 58 (93)
T ss_dssp EEEEETTEEEEETTSBHHHHHHHHTCCCCCTTCCBHHHHHHHHHSSCCC
T ss_pred eEEeCCCEEEEECCCCHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCCC
Confidence 5556788999999999999999999999875 999999998 6777764
No 135
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=88.64 E-value=0.087 Score=42.78 Aligned_cols=49 Identities=16% Similarity=0.058 Sum_probs=41.7
Q ss_pred cccccCCceEecCCCCCccccccccccccC--C-CCccccccc-cccccCC-Cc
Q 010325 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQR--S-DSTTNGLIY-ASEDIED-GE 413 (513)
Q Consensus 365 ~~~~~~~~~~vd~~~~i~~~~~~~~~~l~~--~-~~t~~gl~~-~~~~~e~-g~ 413 (513)
+.+..++.|.+++.++++++++.++..++. . +.|++||++ .+.+++. |+
T Consensus 9 i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~~~~TlgG~i~~~lg~iP~~Gd 62 (90)
T 2p13_A 9 AEQQADGTWLMDGWISIRKASNLLEHDLVDEAERYSTLGGYLLWQFGYIPAAGE 62 (90)
T ss_dssp EEECTTSCEEEETTSBHHHHHHHHTSCCCCTTCCCCBHHHHHHHHHSSCCCTTC
T ss_pred eEEeCCCEEEEECcCCHHHHHHHHCCCCCCcCCCCccHHHHHHHHhCCCCCCCC
Confidence 455678899999999999999999999986 4 999999999 6777765 54
No 136
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=88.20 E-value=0.095 Score=42.15 Aligned_cols=48 Identities=13% Similarity=0.040 Sum_probs=40.2
Q ss_pred ccccCCceEecCCCCCcccccccccc-ccC---C-CCccccccc-cccccCC-Cc
Q 010325 366 QDEKTESVVVDVDRPLSSGSMNRLSS-SQR---S-DSTTNGLIY-ASEDIED-GE 413 (513)
Q Consensus 366 ~~~~~~~~~vd~~~~i~~~~~~~~~~-l~~---~-~~t~~gl~~-~~~~~e~-g~ 413 (513)
.+...+.|.+++.+++.++++.++.. ++. + +.|++||++ ...++|. |+
T Consensus 4 ~~~~dg~~~v~G~~~l~dl~~~l~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~Gd 58 (86)
T 2pls_A 4 VQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGD 58 (86)
T ss_dssp EECTTSCEEEETTCBHHHHHHHHTCSCCTTTTSCSCCBHHHHHHHHHTSCCCTTC
T ss_pred EEeCCCeEEEEcccCHHHHHHHhCCCcCCCccCCCcccHHHHHHHHhCCCCCCCC
Confidence 44567889999999999999999998 886 4 899999998 6777764 44
No 137
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=87.30 E-value=0.13 Score=41.40 Aligned_cols=48 Identities=17% Similarity=0.158 Sum_probs=39.9
Q ss_pred ccccCCceEecCCCCCcccccccccc-ccC-C-CCccccccc-cccccCC-Cc
Q 010325 366 QDEKTESVVVDVDRPLSSGSMNRLSS-SQR-S-DSTTNGLIY-ASEDIED-GE 413 (513)
Q Consensus 366 ~~~~~~~~~vd~~~~i~~~~~~~~~~-l~~-~-~~t~~gl~~-~~~~~e~-g~ 413 (513)
.+..++.|.+++.++++++++.++.. ++. + +.|++||++ ...++|. |+
T Consensus 4 ~~~~dg~~~v~G~~~l~dl~~~l~~~~l~~~~~~~Tl~G~i~~~lg~iP~~Gd 56 (86)
T 2p4p_A 4 MRRNEDSWLIDGATPLEDVMRALNIHTFPRDENYETIGGFMMYMLRXIPXXTD 56 (86)
T ss_dssp CCCCCSEEEEETTSBHHHHHHHTTCCCSCCSCSSCBHHHHHHHHHCSCCCTTC
T ss_pred EEeCCCEEEEEccCCHHHHHHHhCCCCCCcCCCCccHHHHHHHHhCCCCCCCc
Confidence 34567889999999999999999996 885 4 999999998 6777765 44
No 138
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=87.07 E-value=0.1 Score=43.56 Aligned_cols=49 Identities=16% Similarity=0.262 Sum_probs=41.3
Q ss_pred cccccCCceEecCCCCCccccccccccccCC-CCccccccc-cccccCC-Cc
Q 010325 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY-ASEDIED-GE 413 (513)
Q Consensus 365 ~~~~~~~~~~vd~~~~i~~~~~~~~~~l~~~-~~t~~gl~~-~~~~~e~-g~ 413 (513)
+.+..++.|.+++.++++++++.++..++.+ +.|++||+. ...+++. |+
T Consensus 6 i~~~~dg~~~v~G~~~l~dl~~~lg~~l~~e~~dTlgGli~~~lg~iP~~Gd 57 (101)
T 2p3h_A 6 ITETSPDKWLIDGDTPLDEVERAIGYELPEGDYETISGLLFDHANALLKTGD 57 (101)
T ss_dssp EEEEETTEEEEETTCBHHHHHHHHTSCCCCSSCCBHHHHHHHHHCSCCCTTC
T ss_pred eEEeCCCEEEEEccCCHHHHHHHhCCCCCCCCCccHHHHHHHHhCCCCCCCC
Confidence 4456788999999999999999999999875 999999998 6777764 54
No 139
>2o3g_A Putative protein; APC85631.1, neisseria meningitid structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=86.80 E-value=0.12 Score=42.16 Aligned_cols=49 Identities=22% Similarity=0.191 Sum_probs=37.4
Q ss_pred cccccCCceEecCCCCCcccccccccc-cc-CC-CCccccccc-cccccCC-Cc
Q 010325 365 KQDEKTESVVVDVDRPLSSGSMNRLSS-SQ-RS-DSTTNGLIY-ASEDIED-GE 413 (513)
Q Consensus 365 ~~~~~~~~~~vd~~~~i~~~~~~~~~~-l~-~~-~~t~~gl~~-~~~~~e~-g~ 413 (513)
+.+...+.|.|++.+++.++++.++.. ++ .. +.|++||++ ...+++. |+
T Consensus 11 i~~~~dg~~~v~G~~~l~dl~~~l~~~~l~~~~~~~Tl~G~i~~~lg~iP~~Gd 64 (92)
T 2o3g_A 11 VQGNPDESLTVEGALEYVELAPQLNLPQQEEDADFHTVAGLIMEELQTIPDVGD 64 (92)
T ss_dssp ------CCSEEETTCBHHHHTTTTTCCCCCTTCSCSBHHHHHHHHHTSCCCTTC
T ss_pred eEEcCCCEEEEEccCCHHHHHHHhCCCCCCcCCCcccHHHHHHHHhCCCCCCCC
Confidence 455678899999999999999999998 88 44 999999998 6777764 44
No 140
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=85.36 E-value=0.18 Score=42.92 Aligned_cols=48 Identities=13% Similarity=-0.060 Sum_probs=40.9
Q ss_pred ccccccCCceEecCCCCCcccccccccc--ccC----CCCccccccc-cccccCC
Q 010325 364 SKQDEKTESVVVDVDRPLSSGSMNRLSS--SQR----SDSTTNGLIY-ASEDIED 411 (513)
Q Consensus 364 ~~~~~~~~~~~vd~~~~i~~~~~~~~~~--l~~----~~~t~~gl~~-~~~~~e~ 411 (513)
.+.+...+.|.|++.+++.++++.+... ++. ++.|++||++ .+.++|.
T Consensus 28 ~i~~~~dg~~~v~G~~~l~dl~e~lg~~~~l~~~~~~~~dTlgGlil~~lg~iP~ 82 (113)
T 3ded_A 28 EIVQREDGSWLVDGMVSLDRFREFFELEAPLPGEAGGNIHTLAGVMLYQLGRVPS 82 (113)
T ss_dssp CEEECTTSCEEEETTCBHHHHHHHTTCCSCCTTGGGTCCCBHHHHHHHHHCSSCC
T ss_pred ceEEecCCEEEEecccCHHHHHHHhCCCccCCcccCCCCccHHHHHHHHhCCCCC
Confidence 4566778899999999999999999998 885 3899999998 6677775
No 141
>2nqw_A CBS domain protein; PFAM03471, hemolysins, CBS domains, transporter associated D CORC_HLYC, structural genomics, PSI-2; 1.30A {Porphyromonas gingivalis} SCOP: d.145.1.4
Probab=78.11 E-value=0.43 Score=38.84 Aligned_cols=47 Identities=15% Similarity=0.097 Sum_probs=38.6
Q ss_pred cccccCCceEecCCCCCccccccccccccC--------CCCccccccc-cccccCC-Cc
Q 010325 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQR--------SDSTTNGLIY-ASEDIED-GE 413 (513)
Q Consensus 365 ~~~~~~~~~~vd~~~~i~~~~~~~~~~l~~--------~~~t~~gl~~-~~~~~e~-g~ 413 (513)
+.+..++.|.+++.+++.++++.++. +. ++.|++||++ .+.+++. |.
T Consensus 9 i~~~~dg~~~v~G~~~l~dl~~~l~~--~~~~~~~~~~~~~TlgG~i~~~lg~iP~~Gd 65 (93)
T 2nqw_A 9 FKVLGDGSYLFEGKTSLSDVRHYLDL--PENAFGELGDEVDTLSGLFLEIKQELPHVGD 65 (93)
T ss_dssp EEECTTSCEEEETTCBHHHHHHHHTC--CTTTTHHHHTTCSBHHHHHHHHHCSCCCTTC
T ss_pred eEEeCCCEEEEEcccCHHHHHHHhCC--CcccccccCCCcccHHHHHHHHhCcCCCCCC
Confidence 55667889999999999999999988 43 4899999998 6777764 44
No 142
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=29.79 E-value=54 Score=21.64 Aligned_cols=25 Identities=16% Similarity=0.232 Sum_probs=14.0
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHH
Q 010325 27 GIPFGSVWWFVYAGISCVLVLFAGIM 52 (513)
Q Consensus 27 ~~~~~s~~~~~~~~i~~~LlllsafF 52 (513)
..-.-|.+|.+++ +.++.+++|..|
T Consensus 11 ELNRTSLy~GLLl-ifvlavlFssyf 35 (37)
T 3arc_L 11 ELNRTSLYLGLLL-ILVLALLFSSYF 35 (37)
T ss_dssp CCCHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred eechhhHHHHHHH-HHHHHHHhhhhc
Confidence 3445678887653 444445555544
No 143
>4h33_A LMO2059 protein; bilayers, KVLM, lipidic cubic phase (LCP), pore module, ION membrane protein; HET: OLC; 3.10A {Listeria monocytogenes} PDB: 4h37_A
Probab=24.85 E-value=1.4e+02 Score=25.28 Aligned_cols=14 Identities=14% Similarity=0.456 Sum_probs=10.0
Q ss_pred HHHhhccchhhHHH
Q 010325 131 VLFFGEVIPQAICT 144 (513)
Q Consensus 131 ilifGEiiPK~la~ 144 (513)
.+=+|++.|++..-
T Consensus 57 TvGyGDi~P~t~~g 70 (137)
T 4h33_A 57 TVGYGDIVPVTPIG 70 (137)
T ss_dssp TCCCSSSCCCSHHH
T ss_pred cccCCCCCCCCHhH
Confidence 34579999997543
Done!