Query 010330
Match_columns 513
No_of_seqs 315 out of 2628
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 04:28:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010330.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010330hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 8.7E-67 3E-71 536.1 21.3 288 42-403 26-318 (329)
2 1nlt_A Protein YDJ1, mitochond 100.0 1.1E-58 3.7E-63 459.3 22.1 233 161-397 8-248 (248)
3 3agx_A DNAJ homolog subfamily 100.0 3.5E-45 1.2E-49 346.3 20.2 177 164-400 2-179 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 3.2E-44 1.1E-48 339.4 20.7 177 163-400 2-179 (180)
5 1c3g_A Heat shock protein 40; 100.0 8E-42 2.7E-46 320.2 16.0 169 165-397 1-170 (170)
6 3i38_A Putative chaperone DNAJ 99.9 2.2E-26 7.4E-31 200.2 11.3 96 305-403 2-97 (109)
7 1xao_A YDJ1, mitochondrial pro 99.9 3E-24 1E-28 190.1 10.9 95 309-404 1-100 (121)
8 1bq0_A DNAJ, HSP40; chaperone, 99.9 3.7E-24 1.3E-28 184.2 5.2 97 43-139 2-99 (103)
9 1hdj_A Human HSP40, HDJ-1; mol 99.9 2E-22 7E-27 164.1 7.1 73 43-115 2-74 (77)
10 2ctr_A DNAJ homolog subfamily 99.8 7E-22 2.4E-26 165.2 5.9 75 42-116 5-79 (88)
11 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.9E-21 6.5E-26 162.5 7.5 74 39-112 12-85 (88)
12 2ctt_A DNAJ homolog subfamily 99.8 3.9E-22 1.3E-26 171.8 1.9 103 164-270 1-103 (104)
13 2ctp_A DNAJ homolog subfamily 99.8 1.9E-21 6.4E-26 158.8 5.7 72 42-113 5-76 (78)
14 2dn9_A DNAJ homolog subfamily 99.8 3.2E-21 1.1E-25 157.7 7.0 72 42-113 5-77 (79)
15 2o37_A Protein SIS1; HSP40, J- 99.8 2.2E-21 7.5E-26 163.5 4.4 74 40-115 4-77 (92)
16 2ej7_A HCG3 gene; HCG3 protein 99.8 5.2E-21 1.8E-25 157.6 6.4 72 43-114 8-81 (82)
17 2och_A Hypothetical protein DN 99.8 5.8E-21 2E-25 154.0 6.0 70 40-111 4-73 (73)
18 2dmx_A DNAJ homolog subfamily 99.8 6E-21 2.1E-25 160.7 6.3 74 43-116 8-83 (92)
19 2ctw_A DNAJ homolog subfamily 99.8 5E-21 1.7E-25 166.3 5.6 82 33-114 6-88 (109)
20 2ctq_A DNAJ homolog subfamily 99.8 1.1E-20 3.6E-25 165.0 7.0 75 40-114 16-91 (112)
21 2yua_A Williams-beuren syndrom 99.8 1.4E-20 4.8E-25 160.7 6.1 71 38-108 11-82 (99)
22 2lgw_A DNAJ homolog subfamily 99.8 1.5E-20 5.1E-25 160.6 5.6 72 44-115 2-75 (99)
23 1wjz_A 1700030A21RIK protein; 99.8 7.2E-20 2.5E-24 154.5 5.4 70 41-110 13-89 (94)
24 3apq_A DNAJ homolog subfamily 99.8 2.3E-19 7.7E-24 171.5 6.1 73 44-116 2-75 (210)
25 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 2.5E-19 8.5E-24 155.5 3.7 72 40-111 11-87 (109)
26 2ys8_A RAB-related GTP-binding 99.7 1.1E-18 3.9E-23 146.3 5.7 64 41-104 24-87 (90)
27 2l6l_A DNAJ homolog subfamily 99.7 1E-17 3.5E-22 154.1 5.5 69 42-110 8-83 (155)
28 1faf_A Large T antigen; J doma 99.7 8.2E-18 2.8E-22 137.7 4.2 67 43-113 10-78 (79)
29 1gh6_A Large T antigen; tumor 99.7 1.9E-18 6.4E-23 151.1 0.2 65 43-110 7-73 (114)
30 1iur_A KIAA0730 protein; DNAJ 99.7 1.2E-17 4.1E-22 139.5 3.3 70 36-105 8-79 (88)
31 2pf4_E Small T antigen; PP2A, 99.7 4E-18 1.4E-22 159.0 0.1 65 43-110 10-76 (174)
32 2qwo_B Putative tyrosine-prote 99.6 4.9E-17 1.7E-21 136.5 2.1 74 8-98 14-91 (92)
33 3hho_A CO-chaperone protein HS 99.6 1.4E-16 4.8E-21 149.4 5.3 66 43-108 3-76 (174)
34 3apo_A DNAJ homolog subfamily 99.6 3.9E-17 1.3E-21 184.6 0.9 86 31-116 7-94 (780)
35 1n4c_A Auxilin; four helix bun 99.6 2E-16 6.9E-21 148.5 4.5 62 44-105 117-182 (182)
36 1fpo_A HSC20, chaperone protei 99.6 3.4E-16 1.1E-20 146.4 4.2 65 45-109 2-74 (171)
37 3bvo_A CO-chaperone protein HS 99.6 5E-16 1.7E-20 149.3 5.3 65 43-107 42-114 (207)
38 3ag7_A Putative uncharacterize 99.6 4.1E-16 1.4E-20 134.6 2.6 57 43-100 40-104 (106)
39 2guz_A Mitochondrial import in 99.6 9.2E-16 3.1E-20 122.9 3.2 58 43-103 13-71 (71)
40 3uo3_A J-type CO-chaperone JAC 99.5 1.1E-15 3.9E-20 144.0 2.8 64 43-108 10-80 (181)
41 1exk_A DNAJ protein; extended 99.5 2.4E-14 8.1E-19 116.7 3.7 78 181-262 1-78 (79)
42 1nlt_A Protein YDJ1, mitochond 99.3 8E-12 2.7E-16 123.3 8.9 64 254-317 177-246 (248)
43 2y4t_A DNAJ homolog subfamily 99.0 3.3E-10 1.1E-14 116.3 5.2 65 43-107 381-449 (450)
44 3i38_A Putative chaperone DNAJ 98.8 1.3E-09 4.4E-14 94.3 3.6 52 265-318 39-90 (109)
45 1xao_A YDJ1, mitochondrial pro 98.7 5.4E-09 1.8E-13 92.0 4.0 55 264-318 34-92 (121)
46 2guz_B Mitochondrial import in 98.6 2.6E-08 8.9E-13 78.0 4.3 52 45-99 5-59 (65)
47 3lz8_A Putative chaperone DNAJ 98.4 3.6E-07 1.2E-11 93.5 6.3 73 313-386 139-225 (329)
48 1c3g_A Heat shock protein 40; 98.3 8.6E-07 2.9E-11 82.4 7.5 71 316-387 2-81 (170)
49 2q2g_A HSP40 protein, heat sho 98.3 1.1E-06 3.6E-11 82.5 7.8 74 314-388 3-88 (180)
50 3agx_A DNAJ homolog subfamily 98.3 1.3E-06 4.5E-11 82.0 7.8 73 314-388 2-88 (181)
51 3pmq_A Decaheme cytochrome C M 97.8 2.7E-07 9.1E-12 102.0 -7.9 78 168-245 168-257 (669)
52 3lcz_A YCZA, inhibitor of trap 97.5 2.6E-05 9E-10 58.4 1.0 30 234-263 9-38 (53)
53 1exk_A DNAJ protein; extended 97.4 9E-05 3.1E-09 59.6 3.2 47 206-261 9-63 (79)
54 2ctt_A DNAJ homolog subfamily 97.3 9.1E-05 3.1E-09 63.0 2.3 47 191-249 45-96 (104)
55 2bx9_A Anti-trap, AT, tryptoph 97.1 4.4E-05 1.5E-09 57.2 -0.9 36 192-230 10-46 (53)
56 2bx9_A Anti-trap, AT, tryptoph 96.7 0.00059 2E-08 51.0 1.9 27 235-261 10-36 (53)
57 3lcz_A YCZA, inhibitor of trap 96.0 0.0034 1.2E-07 46.8 2.8 26 192-220 10-35 (53)
58 2pzi_A Probable serine/threoni 89.7 0.16 5.4E-06 56.1 3.2 50 39-95 624-675 (681)
59 2qkd_A Zinc finger protein ZPR 64.8 13 0.00045 38.5 7.4 26 332-361 295-320 (404)
60 3nyb_B Protein AIR2; polya RNA 44.7 13 0.00043 29.9 2.6 55 190-248 4-60 (83)
61 1qo8_A Flavocytochrome C3 fuma 35.8 2.3 7.9E-05 45.7 -4.1 66 193-258 14-86 (566)
62 1ltl_A DNA replication initiat 35.7 1.2E+02 0.004 29.4 8.6 16 229-244 151-166 (279)
63 1y0p_A Fumarate reductase flav 35.5 4.7 0.00016 43.3 -1.8 65 193-257 13-88 (571)
64 1msz_A DNA-binding protein smu 31.4 31 0.0011 27.9 2.9 25 381-405 35-59 (86)
65 2vl6_A SSO MCM N-TER, minichro 29.7 1.9E+02 0.0065 27.6 8.9 85 208-302 141-234 (268)
66 1d4d_A Flavocytochrome C fumar 29.1 7.3 0.00025 41.9 -1.6 64 193-256 15-90 (572)
67 3zxf_A Galectin-7; sugar bindi 27.1 82 0.0028 27.2 5.2 43 344-386 9-59 (138)
68 2cqn_A Formin-binding protein 26.0 45 0.0015 26.2 3.0 53 56-109 6-62 (77)
69 1ltl_A DNA replication initiat 26.0 59 0.002 31.6 4.5 11 250-260 158-168 (279)
70 1uzc_A Hypothetical protein FL 22.2 95 0.0033 23.9 4.1 52 55-108 11-65 (71)
71 2pk2_A Cyclin-T1, protein TAT; 21.3 56 0.0019 33.0 3.4 27 44-72 219-245 (358)
72 2wkk_A Galectin-2; sugar-bindi 21.1 1.4E+02 0.0047 26.2 5.6 44 343-386 9-58 (150)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=8.7e-67 Score=536.11 Aligned_cols=288 Identities=27% Similarity=0.452 Sum_probs=161.6
Q ss_pred cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCC-
Q 010330 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL- 120 (513)
Q Consensus 42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~- 120 (513)
..+|||++|||+++||.+|||+|||+||++||||+|+++.|+++|++|++||++|+||.+|+.||+|+..+..++++++
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~ 105 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQR 105 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccccc
Confidence 3479999999999999999999999999999999998888999999999999999999999999999554322111110
Q ss_pred ---CCCCCCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCC
Q 010330 121 ---SNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSC 197 (513)
Q Consensus 121 ---~~~~~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C 197 (513)
+.+..+.++.|+|++|||+. +.+ + .+..+.+|.|+.++|.|||+|+|+|+++++.+.+.+.|
T Consensus 106 ~~~~~~f~~~~f~diF~~~Fg~~--g~~-----~-----~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~--- 170 (329)
T 3lz8_A 106 QTHEQSYSQQDFDDIFSSMFGQQ--AHQ-----R-----RRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN--- 170 (329)
T ss_dssp -------------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC---
T ss_pred ccccCCcCCCchhhhhHhhhcCc--CCC-----C-----CCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec---
Confidence 11111235678898888642 110 0 01124679999999999999999999999999876432
Q ss_pred CCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCC
Q 010330 198 GGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 277 (513)
Q Consensus 198 ~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G 277 (513)
|.|. ..+++.++++|+||||+++|
T Consensus 171 ------------------g~G~--------------------------------------v~~~~~~~l~V~IP~Gv~~G 194 (329)
T 3lz8_A 171 ------------------VFGM--------------------------------------IESETPKTLNVKIPAGVVDG 194 (329)
T ss_dssp ------------------SCC---------------------------------------CCEEEEEEEEEEECTTCCTT
T ss_pred ------------------CCeE--------------------------------------EEEecceEEEEeCCCCCCCC
Confidence 1121 11233568999999999999
Q ss_pred CEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEE
Q 010330 278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV 357 (513)
Q Consensus 278 ~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~ 357 (513)
++|+|+|+|+++.+++.+|||||+|+|++|+.|+|+|+||+++++|+++|||||++++|+||||++.|+||+|+|||+++
T Consensus 195 ~~Irl~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~v~l~ip~gt~~g~~~ 274 (329)
T 3lz8_A 195 QRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRL 274 (329)
T ss_dssp CEEEESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEE
T ss_pred CEEEEcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCCEEEEECCCCCCCCEE
Confidence 99999999999877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHh-hc
Q 010330 358 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAF-LK 403 (513)
Q Consensus 358 ~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~-~~ 403 (513)
+|+|+|||.. +.+|||||+|+|+||++||++|+++|++|++ ..
T Consensus 275 rl~G~GmP~~---~~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~~~~ 318 (329)
T 3lz8_A 275 RIKGKGLVSK---THTGDLFAVIKIVMPTKPDEKARELWQQLAAAEA 318 (329)
T ss_dssp EETTCSCBCS---SCBCCEEEEEEECCCSSCCHHHHHHHHHHHHHTT
T ss_pred EEcCCCCCCC---CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhcc
Confidence 9999999975 3699999999999999999999999999999 44
No 2
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=1.1e-58 Score=459.29 Aligned_cols=233 Identities=24% Similarity=0.476 Sum_probs=209.3
Q ss_pred CCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcce-eeeecCCC
Q 010330 161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLI-SQVSTCSK 239 (513)
Q Consensus 161 ~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~-~~~~~C~~ 239 (513)
+.++.|++++|.|||||||+|+++++.+.+.+.|++|+|+|++++. ..+|+.|+|+|+++..+++++ ++ ++..+|+.
T Consensus 8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~ 85 (248)
T 1nlt_A 8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV 85 (248)
T ss_dssp CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT
T ss_pred CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC
Confidence 4679999999999999999999999999999999999999999887 499999999999988888777 44 45679999
Q ss_pred CCCCcEEE--eeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccc
Q 010330 240 CGGDGKII--IDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNL 317 (513)
Q Consensus 240 C~G~G~~i--~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL 317 (513)
|+|+|+++ .+.|..|+|.|++.+.++++|+||||+++|++|+|+|+|+++ +++.+|||||+|++++|+.|+|+|+||
T Consensus 86 C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~-~~g~~GDl~v~i~v~~h~~F~R~G~DL 164 (248)
T 1nlt_A 86 CHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQA-PDVIPGDVVFIVSERPHKSFKRDGDDL 164 (248)
T ss_dssp CSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCC-TTCBCCCEEEEEEECCCSSCEEETTEE
T ss_pred CCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCC-CCCCcceEEEEEEEecCccceeeCCEE
Confidence 99999999 889999999999999999999999999999999999999986 566899999999999999999999999
Q ss_pred eEEEecCHHHHhcCCeeEEeccCCc-EEEEeCCC--CCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCC--CChhH
Q 010330 318 FSKISVDYTEAILGTSMEVETVEGM-KDLRIPSG--VQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKD--ISDPE 392 (513)
Q Consensus 318 ~~~~~Isl~eAllG~~v~V~tldG~-~~l~Ip~g--~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~--ls~~q 392 (513)
|++++|+|+|||||++++|+||||+ +.|+||+| +|||++++|+|+|||..+++ .+|||||+|+|+||++ ||++|
T Consensus 165 ~~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q 243 (248)
T 1nlt_A 165 VYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEEN 243 (248)
T ss_dssp EEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC--------
T ss_pred EEEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHH
Confidence 9999999999999999999999996 89999999 99999999999999987665 6899999999999999 99999
Q ss_pred HHHHH
Q 010330 393 RALVE 397 (513)
Q Consensus 393 r~lLe 397 (513)
+++|+
T Consensus 244 ~~~l~ 248 (248)
T 1nlt_A 244 LKKLE 248 (248)
T ss_dssp -----
T ss_pred HHhhC
Confidence 99885
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=3.5e-45 Score=346.28 Aligned_cols=177 Identities=21% Similarity=0.380 Sum_probs=159.0
Q ss_pred CcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCC
Q 010330 164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGD 243 (513)
Q Consensus 164 g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~ 243 (513)
++|++++|.|||||||+|+++++.+.+
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~----------------------------------------------------- 28 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISH----------------------------------------------------- 28 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEE-----------------------------------------------------
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEec-----------------------------------------------------
Confidence 468999999999999999999987653
Q ss_pred cEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEec
Q 010330 244 GKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISV 323 (513)
Q Consensus 244 G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~I 323 (513)
.|..|+|.|++.+.++++|+||||+++|++|+|+|+|+++. ++.+|||||+|++++|+.|+|+|+||+++++|
T Consensus 29 ------~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~-~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~I 101 (181)
T 3agx_A 29 ------KRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIPADIVFVLKDKPHNIFKRDGSDVIYPARI 101 (181)
T ss_dssp ------EEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCS-SSCCCCEEEEEEECCCSSCEEETTEEEEEEEE
T ss_pred ------ccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCC-CCCcccEEEEEEEeccccceeeCCcEEEEEEc
Confidence 24445555556678999999999999999999999999975 67999999999999999999999999999999
Q ss_pred CHHHHhcCCeeEEeccCCc-EEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHH
Q 010330 324 DYTEAILGTSMEVETVEGM-KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA 400 (513)
Q Consensus 324 sl~eAllG~~v~V~tldG~-~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~ 400 (513)
+++||+||++++|+||||+ +.|+||+++|||++++|+|+|||..++++.+|||||+|+|.||++||++|+++|++|+
T Consensus 102 sl~eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~~ 179 (181)
T 3agx_A 102 SLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 179 (181)
T ss_dssp EHHHHHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHHS
T ss_pred CHHHHhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence 9999999999999999996 8899999999999999999999987666679999999999999999999999999987
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.2e-44 Score=339.40 Aligned_cols=177 Identities=21% Similarity=0.373 Sum_probs=164.0
Q ss_pred CCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCC
Q 010330 163 FGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGG 242 (513)
Q Consensus 163 ~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G 242 (513)
++.|++++|.|||||||+|+++++.+.+.+.|+.
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~---------------------------------------------- 35 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH---------------------------------------------- 35 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence 3679999999999999999999999999888741
Q ss_pred CcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEe
Q 010330 243 DGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKIS 322 (513)
Q Consensus 243 ~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~ 322 (513)
|++.+.++++|+||||+++|++|+|+|+|+++.+++.+|||||+|++++|+.|+|+|+|||++++
T Consensus 36 ---------------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~ 100 (180)
T 2q2g_A 36 ---------------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVT 100 (180)
T ss_dssp ---------------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEE
T ss_pred ---------------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEE
Confidence 33455789999999999999999999999997678899999999999999999999999999999
Q ss_pred cCHHHHhcCCeeEEeccCCc-EEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHH
Q 010330 323 VDYTEAILGTSMEVETVEGM-KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA 400 (513)
Q Consensus 323 Isl~eAllG~~v~V~tldG~-~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~ 400 (513)
|+++||+||++++|+||||+ +.|+||+++|||++++|+|+|||..++++.+|||||+|+|.||++||++|+++|++|+
T Consensus 101 Isl~eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~~~ 179 (180)
T 2q2g_A 101 IPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL 179 (180)
T ss_dssp EEHHHHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHHHHC
T ss_pred cCHHHHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence 99999999999999999996 7899999999999999999999987766689999999999999999999999999986
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=8e-42 Score=320.20 Aligned_cols=169 Identities=21% Similarity=0.428 Sum_probs=155.2
Q ss_pred cceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCc
Q 010330 165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDG 244 (513)
Q Consensus 165 ~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G 244 (513)
+|++++|.|||||||+|+++++.+.+. | | .
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~--~--~-------------------~--------------------------- 30 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRK--G--P-------------------H--------------------------- 30 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEE--E--T-------------------T---------------------------
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEe--c--C-------------------C---------------------------
Confidence 489999999999999999999999875 1 0 0
Q ss_pred EEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecC
Q 010330 245 KIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVD 324 (513)
Q Consensus 245 ~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Is 324 (513)
|.+ +.++++|+||||+.+|++|+|+|+|+++.+++.+|||||+|++++|+.|+|+|+||+++++|+
T Consensus 31 -------------G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Is 96 (170)
T 1c3g_A 31 -------------GAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLS 96 (170)
T ss_dssp -------------TEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCB
T ss_pred -------------CcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcC
Confidence 112 458899999999999999999999998888899999999999999999999999999999999
Q ss_pred HHHHhcCCeeEEeccCCc-EEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHH
Q 010330 325 YTEAILGTSMEVETVEGM-KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVE 397 (513)
Q Consensus 325 l~eAllG~~v~V~tldG~-~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe 397 (513)
++||+||++++|+||||+ +.|+||+++|||++++|+|+|||..++++.+|||||+|+|.||++||++|+++|+
T Consensus 97 l~eAllG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 97 FKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 170 (170)
T ss_dssp HHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred HHHHhCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence 999999999999999996 8999999999999999999999987766678999999999999999999999874
No 6
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.93 E-value=2.2e-26 Score=200.15 Aligned_cols=96 Identities=22% Similarity=0.359 Sum_probs=90.7
Q ss_pred eeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEc
Q 010330 305 DEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLI 384 (513)
Q Consensus 305 ~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~ 384 (513)
++|+.|+|+|+||+++++|+|.||++|++++|+|+||.+.|+||+|+|||++++|+|+|||. .+ .+|||||+|+|.|
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~~~v~ip~g~~~G~~~rl~G~G~p~-~~--~~GDL~v~~~V~~ 78 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVS-KT--HTGDLFAVIKIVM 78 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETTCSCBC-SS--CBCCEEEEEEECC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCCEEEeeCCCcCcCeEEEECCccCCC-CC--CCcCEEEEEEEEC
Confidence 68999999999999999999999999999999999999999999999999999999999998 32 7999999999999
Q ss_pred CCCCChhHHHHHHHHHhhc
Q 010330 385 PKDISDPERALVEEIAFLK 403 (513)
Q Consensus 385 P~~ls~~qr~lLe~l~~~~ 403 (513)
|++||++|+++|++|+++.
T Consensus 79 P~~Ls~~q~~~l~~l~~~~ 97 (109)
T 3i38_A 79 PTKPDEKARELWQQLAAAE 97 (109)
T ss_dssp CSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHhhc
Confidence 9999999999999999975
No 7
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3e-24 Score=190.09 Aligned_cols=95 Identities=24% Similarity=0.360 Sum_probs=85.2
Q ss_pred ccccccccceEEEecCHHHHhcCCeeEEeccCCc-EEEEeCCC--CCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcC
Q 010330 309 GIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSG--VQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIP 385 (513)
Q Consensus 309 ~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~-~~l~Ip~g--~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P 385 (513)
.|+|+|+||+++++|+|++|+||+++.|+||||+ +.|+||+| +|||++++|+|+|||..+++ .+|||||+|+|.||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 4899999999999999999999999999999997 89999999 99999999999999987665 78999999999999
Q ss_pred CC--CChhHHHHHHHHHhhcC
Q 010330 386 KD--ISDPERALVEEIAFLKS 404 (513)
Q Consensus 386 ~~--ls~~qr~lLe~l~~~~~ 404 (513)
+. |+++|+++|++|+....
T Consensus 80 ~~~~ls~~q~~~l~~l~~~~~ 100 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILPPRI 100 (121)
T ss_dssp CTTCSCHHHHHHHHHHSCCCC
T ss_pred CCCCCCHHHHHHHHHHccccc
Confidence 99 99999999999997553
No 8
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.89 E-value=3.7e-24 Score=184.16 Aligned_cols=97 Identities=42% Similarity=0.710 Sum_probs=70.1
Q ss_pred ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCC
Q 010330 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS 121 (513)
Q Consensus 43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~ 121 (513)
..|||+||||+++||.+|||+|||+|+++||||+++. +.++++|++|++||++|+||.+|+.||++|++++..+..+++
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~~ 81 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG 81 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC----
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCCC
Confidence 4799999999999999999999999999999999984 778999999999999999999999999999998875432111
Q ss_pred CCCCCCCcccccccccCC
Q 010330 122 NTSQGVDPFELYSAFFGG 139 (513)
Q Consensus 122 ~~~~g~d~~dlF~~fFgg 139 (513)
+.+.+.++.++|+.||++
T Consensus 82 ~~~~~~~~~~~f~~~f~~ 99 (103)
T 1bq0_A 82 GFGGGADFSDIFGDVFGD 99 (103)
T ss_dssp ------------------
T ss_pred CCCCCCCHHHHHHHHHHh
Confidence 111123556778888854
No 9
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.86 E-value=2e-22 Score=164.10 Aligned_cols=73 Identities=59% Similarity=1.041 Sum_probs=69.7
Q ss_pred ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCc
Q 010330 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG 115 (513)
Q Consensus 43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~ 115 (513)
..|||+||||+++||.+|||+|||+|+++||||+++++.+.+.|++|++||++|+||.+|+.||++|++++.+
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 4799999999999999999999999999999999988889999999999999999999999999999988764
No 10
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=7e-22 Score=165.15 Aligned_cols=75 Identities=48% Similarity=0.803 Sum_probs=70.3
Q ss_pred cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCcc
Q 010330 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE 116 (513)
Q Consensus 42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~ 116 (513)
...|||+||||+++|+.+|||+|||+|+++||||+++++.++++|++|++||++|+||.+|+.||++|+.++.++
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 79 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG 79 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence 347999999999999999999999999999999999988899999999999999999999999999998877644
No 11
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=1.9e-21 Score=162.52 Aligned_cols=74 Identities=49% Similarity=0.850 Sum_probs=69.5
Q ss_pred ccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccC
Q 010330 39 IRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAG 112 (513)
Q Consensus 39 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g 112 (513)
+.....|||+||||+++|+.+|||+|||+|+++||||+++++.++++|++|++||++|+||.+|+.||++|+.+
T Consensus 12 ~~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 12 LSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp CCSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred hccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 44567899999999999999999999999999999999998889999999999999999999999999999754
No 12
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=3.9e-22 Score=171.84 Aligned_cols=103 Identities=30% Similarity=0.623 Sum_probs=94.9
Q ss_pred CcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCC
Q 010330 164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGD 243 (513)
Q Consensus 164 g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~ 243 (513)
|.|++++|.|||||||+|++++|.+.+.+.|+.|+|+|++++....+|+.|+|+|++...+ |+|++..+|+.|+|+
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~----G~~~~~~~C~~C~G~ 76 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT----GPFVMRSTCRRCGGR 76 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE----TTEEEEEECSSSSSS
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe----CCEEEEEECCcCCCc
Confidence 4678899999999999999999999999999999999999988889999999999887653 668888999999999
Q ss_pred cEEEeeeeeecCCceEEeeeeEEEEEc
Q 010330 244 GKIIIDHCRRCGGNGEVQSKRSMKVVI 270 (513)
Q Consensus 244 G~~i~~~C~~C~G~G~v~~~k~l~V~I 270 (513)
|+++.++|+.|+|.|++++.+.|+|+|
T Consensus 77 G~~i~~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 77 GSIIISPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp SEECSSCCSSSSSCSEECCCCSSCCSC
T ss_pred ceECCCcCCCCCCeeEEEEEEEEEEEc
Confidence 999999999999999999988888875
No 13
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=1.9e-21 Score=158.78 Aligned_cols=72 Identities=49% Similarity=0.846 Sum_probs=68.0
Q ss_pred cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCC
Q 010330 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGI 113 (513)
Q Consensus 42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~ 113 (513)
...|||+||||+++|+.+|||+|||+|+++||||+++.+++.+.|++|++||++|+||.+|+.||++|+.+.
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 76 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGPS 76 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCSC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 357999999999999999999999999999999999888899999999999999999999999999997654
No 14
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=3.2e-21 Score=157.67 Aligned_cols=72 Identities=51% Similarity=0.866 Sum_probs=67.1
Q ss_pred cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccccccCC
Q 010330 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGI 113 (513)
Q Consensus 42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~ 113 (513)
...|||+||||+++|+.+|||+|||+|+++||||+++ .+.++++|++|++||++|+||.+|+.||++|..+.
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 77 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPS 77 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcCC
Confidence 3579999999999999999999999999999999998 47789999999999999999999999999997654
No 15
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.83 E-value=2.2e-21 Score=163.49 Aligned_cols=74 Identities=45% Similarity=0.700 Sum_probs=67.9
Q ss_pred cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCc
Q 010330 40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG 115 (513)
Q Consensus 40 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~ 115 (513)
|....|||+||||+++|+.+|||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||++|++++..
T Consensus 4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 77 (92)
T 2o37_A 4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTG--DTEKFKEISEAFEILNDPQKREIYDQYGLEAARS 77 (92)
T ss_dssp CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTC--CHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHT
T ss_pred cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhc
Confidence 4567899999999999999999999999999999999953 4679999999999999999999999999887664
No 16
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=5.2e-21 Score=157.56 Aligned_cols=72 Identities=49% Similarity=0.826 Sum_probs=66.8
Q ss_pred ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHHhhccchhhhhcccccccCCC
Q 010330 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT 114 (513)
Q Consensus 43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~--~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~ 114 (513)
..|||+||||+++|+.+|||+|||+|+++||||+++.. .++++|++|++||++|+||.+|+.||++|+.++.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~~ 81 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPSS 81 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccccC
Confidence 37999999999999999999999999999999999753 6788999999999999999999999999987654
No 17
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.82 E-value=5.8e-21 Score=153.96 Aligned_cols=70 Identities=50% Similarity=0.823 Sum_probs=62.7
Q ss_pred cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhccccccc
Q 010330 40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA 111 (513)
Q Consensus 40 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~ 111 (513)
|....|||++|||+++|+.+|||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||++|++
T Consensus 4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD--GAEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT--CHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC--HHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 5567899999999999999999999999999999999964 468999999999999999999999999863
No 18
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=6e-21 Score=160.68 Aligned_cols=74 Identities=49% Similarity=0.746 Sum_probs=68.4
Q ss_pred ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHHhhccchhhhhcccccccCCCcc
Q 010330 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE 116 (513)
Q Consensus 43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~--~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~ 116 (513)
..|||+||||+++|+.+|||+|||+|+++||||+++.. .++++|++|++||++|+||.+|+.||++|.+++..+
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 83 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAG 83 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCC
Confidence 36999999999999999999999999999999999753 678999999999999999999999999998887653
No 19
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=5e-21 Score=166.32 Aligned_cols=82 Identities=46% Similarity=0.790 Sum_probs=73.4
Q ss_pred ccccccccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhccccccc
Q 010330 33 SHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA 111 (513)
Q Consensus 33 ~~~~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~ 111 (513)
.++...+.....|||+||||+++|+.+|||+|||+|+++||||++++ +.+.++|++|++||++|+||.+|+.||++|..
T Consensus 6 s~~~r~~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~ 85 (109)
T 2ctw_A 6 SGRQRSLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSL 85 (109)
T ss_dssp CCCCCCTTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHH
T ss_pred CCCCcccCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccc
Confidence 33445566778999999999999999999999999999999999974 67899999999999999999999999999987
Q ss_pred CCC
Q 010330 112 GIT 114 (513)
Q Consensus 112 g~~ 114 (513)
++.
T Consensus 86 ~~~ 88 (109)
T 2ctw_A 86 GLY 88 (109)
T ss_dssp HHH
T ss_pred ccc
Confidence 654
No 20
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1.1e-20 Score=165.01 Aligned_cols=75 Identities=27% Similarity=0.548 Sum_probs=69.8
Q ss_pred cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccccccCCC
Q 010330 40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT 114 (513)
Q Consensus 40 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~ 114 (513)
+....|||+||||+++|+.+|||+|||+|+++||||+++ ++.++++|++|++||++|+||.+|+.||++|++++.
T Consensus 16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 345689999999999999999999999999999999998 578999999999999999999999999999987764
No 21
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=1.4e-20 Score=160.67 Aligned_cols=71 Identities=39% Similarity=0.504 Sum_probs=65.2
Q ss_pred cccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccc
Q 010330 38 MIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRF 108 (513)
Q Consensus 38 ~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~ 108 (513)
.-.+...|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||++
T Consensus 11 ~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~ 82 (99)
T 2yua_A 11 DCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRG 82 (99)
T ss_dssp CCSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred CCCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence 33455689999999999999999999999999999999997 477899999999999999999999999984
No 22
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.81 E-value=1.5e-20 Score=160.57 Aligned_cols=72 Identities=50% Similarity=0.886 Sum_probs=64.6
Q ss_pred cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHHhhccchhhhhcccccccCCCc
Q 010330 44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG 115 (513)
Q Consensus 44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~--~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~ 115 (513)
+|||+||||+++|+.+|||+|||+|+++||||+++.. .++++|++|++||++|+||.+|+.||++|.+++.+
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 6999999999999999999999999999999999753 47899999999999999999999999999887764
No 23
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.78 E-value=7.2e-20 Score=154.49 Aligned_cols=70 Identities=31% Similarity=0.575 Sum_probs=64.2
Q ss_pred ccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-------cchHHHHHHHHHHHHhhccchhhhhcccccc
Q 010330 41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-------PGAEEKFKEISSAYEVLSDDEKRSVYDRFGE 110 (513)
Q Consensus 41 ~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-------~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~ 110 (513)
....|||+||||+++|+.+|||+|||+|+++||||+++. +.++++|++|++||++|+||.+|+.||++..
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 346899999999999999999999999999999999863 4688999999999999999999999998753
No 24
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.76 E-value=2.3e-19 Score=171.54 Aligned_cols=73 Identities=42% Similarity=0.790 Sum_probs=68.6
Q ss_pred cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccccccCCCcc
Q 010330 44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE 116 (513)
Q Consensus 44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~ 116 (513)
.|||++|||+++|+.+|||+|||+||++||||+++ ++++.++|++|++||++|+||.+|+.||++|++++...
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~ 75 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 75 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccc
Confidence 59999999999999999999999999999999996 57899999999999999999999999999999887643
No 25
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.75 E-value=2.5e-19 Score=155.46 Aligned_cols=72 Identities=39% Similarity=0.597 Sum_probs=66.2
Q ss_pred cccccCcccccccCCCC-CHHHHHHHHHHHHHHhCCCCCCC----cchHHHHHHHHHHHHhhccchhhhhccccccc
Q 010330 40 RAAGTDYYSTLNVRQNA-TLQEIKTSYRKLARKYHPDINKS----PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA 111 (513)
Q Consensus 40 ~~~~~d~Y~iLgv~~~a-s~~eIk~ayr~la~k~HPD~n~~----~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~ 111 (513)
+....|||+||||+++| |.+|||+|||+|+++||||+++. +.++++|++|++||++|+||.+|+.||+++..
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 34468999999999999 99999999999999999999975 56889999999999999999999999998854
No 26
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=1.1e-18 Score=146.29 Aligned_cols=64 Identities=33% Similarity=0.515 Sum_probs=60.8
Q ss_pred ccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhh
Q 010330 41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104 (513)
Q Consensus 41 ~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~ 104 (513)
....|||+||||+++|+.+|||+|||+||++||||++++++++++|++|++||++|+|+.+|+.
T Consensus 24 ~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 24 RNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp HTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred hcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 3468999999999999999999999999999999999988999999999999999999999974
No 27
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.69 E-value=1e-17 Score=154.12 Aligned_cols=69 Identities=32% Similarity=0.562 Sum_probs=63.1
Q ss_pred cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcc-------hHHHHHHHHHHHHhhccchhhhhcccccc
Q 010330 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG-------AEEKFKEISSAYEVLSDDEKRSVYDRFGE 110 (513)
Q Consensus 42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~-------a~~~f~~i~~AyevL~d~~kR~~YD~~G~ 110 (513)
...|||+||||+++|+.+|||+|||+|+++||||+++.+. +.++|++|++||++|+||.+|+.||.++.
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 3579999999999999999999999999999999997542 57899999999999999999999998653
No 28
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.69 E-value=8.2e-18 Score=137.73 Aligned_cols=67 Identities=13% Similarity=0.297 Sum_probs=60.5
Q ss_pred ccCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCC
Q 010330 43 GTDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGI 113 (513)
Q Consensus 43 ~~d~Y~iLgv~~~--as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~ 113 (513)
..++|++|||+++ ||.+|||+|||+||++||||++. +.++|++|++||++|+|+.+|+. |.||.+++
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~---~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~~ 78 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG---SHALMQELNSLWGTFKTEVYNLR-MNLGGTGF 78 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC---CHHHHHHHHHHHHHHHHHHHHHT-TCCSSCCC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC---CHHHHHHHHHHHHHHhhHHHHHH-HhcCCccC
Confidence 3689999999999 99999999999999999999984 46899999999999999999988 56887654
No 29
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.69 E-value=1.9e-18 Score=151.12 Aligned_cols=65 Identities=25% Similarity=0.422 Sum_probs=61.0
Q ss_pred ccCcccccccCCCCCH--HHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccc
Q 010330 43 GTDYYSTLNVRQNATL--QEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGE 110 (513)
Q Consensus 43 ~~d~Y~iLgv~~~as~--~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~ 110 (513)
..+||+||||+++|+. +|||+|||+||++||||++++ +++|++|++||++|+||.+|+.||.||.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4699999999999999 999999999999999999865 4789999999999999999999999875
No 30
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.67 E-value=1.2e-17 Score=139.46 Aligned_cols=70 Identities=21% Similarity=0.135 Sum_probs=61.2
Q ss_pred cccccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHHhhccchhhhhc
Q 010330 36 RGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSVY 105 (513)
Q Consensus 36 ~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~--~~a~~~f~~i~~AyevL~d~~kR~~Y 105 (513)
.+.......++|+||||+++||.+|||+|||+||++||||+|++ +.++++|++|++||++|+|...|..+
T Consensus 8 ~~~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~ 79 (88)
T 1iur_A 8 LVPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN 79 (88)
T ss_dssp CCCSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred CCCCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 34445566899999999999999999999999999999999986 34889999999999999998887443
No 31
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.67 E-value=4e-18 Score=159.02 Aligned_cols=65 Identities=25% Similarity=0.458 Sum_probs=58.3
Q ss_pred ccCcccccccCCCCC--HHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccc
Q 010330 43 GTDYYSTLNVRQNAT--LQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGE 110 (513)
Q Consensus 43 ~~d~Y~iLgv~~~as--~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~ 110 (513)
..|||++|||+++|+ .+|||+|||+||+++|||++++ +++|++|++||++|+||.+|+.||+||.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 479999999999999 6999999999999999999865 3789999999999999999999999995
No 32
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.63 E-value=4.9e-17 Score=136.55 Aligned_cols=74 Identities=22% Similarity=0.301 Sum_probs=61.8
Q ss_pred cccccccccCcccccccccCCCCCcccccccccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc----chH
Q 010330 8 SYVNLKLHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP----GAE 83 (513)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~----~a~ 83 (513)
.+.||+.-|++++..-|.. .++|++|||+++||.+|||+|||+||++||||+|++. .|+
T Consensus 14 k~~~ir~lL~~l~~~L~~~-----------------~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~ 76 (92)
T 2qwo_B 14 KERNIRALLSTMHTVLWAG-----------------ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAK 76 (92)
T ss_dssp HTTCHHHHHHHGGGTSCTT-----------------CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHH
T ss_pred ChhHHHHHHHHHHHHhccc-----------------ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHH
Confidence 4566666666666555522 4899999999999999999999999999999999853 278
Q ss_pred HHHHHHHHHHHhhcc
Q 010330 84 EKFKEISSAYEVLSD 98 (513)
Q Consensus 84 ~~f~~i~~AyevL~d 98 (513)
++|++|++||++|.+
T Consensus 77 ~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 77 MIFMELNDAWSEFEN 91 (92)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 899999999999975
No 33
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.63 E-value=1.4e-16 Score=149.37 Aligned_cols=66 Identities=21% Similarity=0.404 Sum_probs=60.5
Q ss_pred ccCcccccccCCCCC--HHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHHhhccchhhhhcccc
Q 010330 43 GTDYYSTLNVRQNAT--LQEIKTSYRKLARKYHPDINKSPG------AEEKFKEISSAYEVLSDDEKRSVYDRF 108 (513)
Q Consensus 43 ~~d~Y~iLgv~~~as--~~eIk~ayr~la~k~HPD~n~~~~------a~~~f~~i~~AyevL~d~~kR~~YD~~ 108 (513)
..|||++|||+++|+ .++||+|||+|+++||||+++... +.++|+.|++||++|+||.+|+.||..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 479999999999998 999999999999999999987543 678999999999999999999999974
No 34
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.62 E-value=3.9e-17 Score=184.64 Aligned_cols=86 Identities=37% Similarity=0.684 Sum_probs=40.9
Q ss_pred Cccccc-ccccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccc
Q 010330 31 NRSHRR-GMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRF 108 (513)
Q Consensus 31 ~~~~~~-~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~ 108 (513)
+++++. ......+.|||++|||+++||.+|||+|||+||++||||+|+ ++.++++|++|++||++|+||.+|+.||+|
T Consensus 7 ~~~~~~~~~~~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~ 86 (780)
T 3apo_A 7 HHHHSSGHIEGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKY 86 (780)
T ss_dssp ----------------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhh
Confidence 334443 334556789999999999999999999999999999999996 577899999999999999999999999999
Q ss_pred cccCCCcc
Q 010330 109 GEAGITGE 116 (513)
Q Consensus 109 G~~g~~~~ 116 (513)
|++++..+
T Consensus 87 ~~~~~~~~ 94 (780)
T 3apo_A 87 GEKGLEDN 94 (780)
T ss_dssp --------
T ss_pred cccccccC
Confidence 99887654
No 35
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.61 E-value=2e-16 Score=148.46 Aligned_cols=62 Identities=21% Similarity=0.393 Sum_probs=58.6
Q ss_pred cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHHhhccchhhhhc
Q 010330 44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSDDEKRSVY 105 (513)
Q Consensus 44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~----a~~~f~~i~~AyevL~d~~kR~~Y 105 (513)
.|||++|||+++|+.+|||+|||+||++||||+++... |+++|++|++||++|+|+.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 59999999999999999999999999999999997543 789999999999999999999988
No 36
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.59 E-value=3.4e-16 Score=146.35 Aligned_cols=65 Identities=25% Similarity=0.369 Sum_probs=59.9
Q ss_pred CcccccccCCCC--CHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHHhhccchhhhhccccc
Q 010330 45 DYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPG------AEEKFKEISSAYEVLSDDEKRSVYDRFG 109 (513)
Q Consensus 45 d~Y~iLgv~~~a--s~~eIk~ayr~la~k~HPD~n~~~~------a~~~f~~i~~AyevL~d~~kR~~YD~~G 109 (513)
|||++|||+++| |.++||+|||+|+++||||+++... +.++|+.|++||++|+||.+|+.||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 899999999999 9999999999999999999987532 4579999999999999999999999863
No 37
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.59 E-value=5e-16 Score=149.32 Aligned_cols=65 Identities=23% Similarity=0.433 Sum_probs=59.2
Q ss_pred ccCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHHhhccchhhhhccc
Q 010330 43 GTDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSPG------AEEKFKEISSAYEVLSDDEKRSVYDR 107 (513)
Q Consensus 43 ~~d~Y~iLgv~~~--as~~eIk~ayr~la~k~HPD~n~~~~------a~~~f~~i~~AyevL~d~~kR~~YD~ 107 (513)
..|||++|||+++ ++.++||+|||+|+++||||+++... +.++|++|++||++|+||.+|+.||.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 5799999999987 79999999999999999999987532 56789999999999999999999995
No 38
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.57 E-value=4.1e-16 Score=134.61 Aligned_cols=57 Identities=18% Similarity=0.262 Sum_probs=51.6
Q ss_pred ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--------chHHHHHHHHHHHHhhccch
Q 010330 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--------GAEEKFKEISSAYEVLSDDE 100 (513)
Q Consensus 43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~--------~a~~~f~~i~~AyevL~d~~ 100 (513)
+.|||++||++. ||.+|||+|||+||++||||+|+++ .|+++|++|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 479999999996 9999999999999999999998642 36889999999999999975
No 39
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.56 E-value=9.2e-16 Score=122.93 Aligned_cols=58 Identities=22% Similarity=0.284 Sum_probs=52.6
Q ss_pred ccCcccccccCC-CCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhh
Q 010330 43 GTDYYSTLNVRQ-NATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103 (513)
Q Consensus 43 ~~d~Y~iLgv~~-~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~ 103 (513)
..++|+||||++ +||.+|||+|||+|+++||||++ ++.++|++|++||++|+|+..|+
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~---g~~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG---GSPFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT---CCHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC---CCHHHHHHHHHHHHHHhhhhhcC
Confidence 369999999999 79999999999999999999997 45679999999999999987764
No 40
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.54 E-value=1.1e-15 Score=143.96 Aligned_cols=64 Identities=23% Similarity=0.456 Sum_probs=58.8
Q ss_pred ccCccccc------ccCC-CCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccc
Q 010330 43 GTDYYSTL------NVRQ-NATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRF 108 (513)
Q Consensus 43 ~~d~Y~iL------gv~~-~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~ 108 (513)
.+|||++| |+++ +||.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||..
T Consensus 10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 47999999 4664 8999999999999999999999975 778999999999999999999999984
No 41
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=99.46 E-value=2.4e-14 Score=116.73 Aligned_cols=78 Identities=38% Similarity=0.856 Sum_probs=68.6
Q ss_pred eeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEE
Q 010330 181 GGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEV 260 (513)
Q Consensus 181 G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v 260 (513)
|++++|.+++.+.|+.|+|+|..+.....+|+.|+|+|.++..+ |+|++..+|+.|+|.|+++.+.|..|+|.|++
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~ 76 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRV 76 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE----TTEEEEEECTTTTTSSEECSSBCGGGTTSSEE
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc----CCCEEeeECcCCCCccEECCCcCCCCCCeEEE
Confidence 45667888999999999999998877778999999999987643 77887789999999999999999999999987
Q ss_pred ee
Q 010330 261 QS 262 (513)
Q Consensus 261 ~~ 262 (513)
.+
T Consensus 77 ~~ 78 (79)
T 1exk_A 77 ER 78 (79)
T ss_dssp EC
T ss_pred ee
Confidence 53
No 42
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.26 E-value=8e-12 Score=123.31 Aligned_cols=64 Identities=22% Similarity=0.370 Sum_probs=45.7
Q ss_pred cCCceEEee--eeEEEEEcCCC--CcCCCEEEEccccccCCCCCCCccEEEEEEEeeccc--cccccccc
Q 010330 254 CGGNGEVQS--KRSMKVVIPPG--VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQG--IHRDGLNL 317 (513)
Q Consensus 254 C~G~G~v~~--~k~l~V~IP~G--v~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~--F~R~G~DL 317 (513)
|+++-.++. .+.++|.||+| +++|++++|+|+|++...+...|||||+|+|.-+.. +..+...|
T Consensus 177 lG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~ 246 (248)
T 1nlt_A 177 AGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKK 246 (248)
T ss_dssp HCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-----------
T ss_pred cCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHh
Confidence 466766765 34799999999 999999999999998644335799999999998776 65544443
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.96 E-value=3.3e-10 Score=116.26 Aligned_cols=65 Identities=49% Similarity=0.714 Sum_probs=56.2
Q ss_pred ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc----chHHHHHHHHHHHHhhccchhhhhccc
Q 010330 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP----GAEEKFKEISSAYEVLSDDEKRSVYDR 107 (513)
Q Consensus 43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~----~a~~~f~~i~~AyevL~d~~kR~~YD~ 107 (513)
..++|.+||+.+.++.+||+++|+++++++|||+.+.+ .++++|++|.+||++|+|+++|+.||+
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 35999999999999999999999999999999998764 388999999999999999999999996
No 44
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=98.83 E-value=1.3e-09 Score=94.30 Aligned_cols=52 Identities=25% Similarity=0.555 Sum_probs=43.2
Q ss_pred EEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccce
Q 010330 265 SMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLF 318 (513)
Q Consensus 265 ~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~ 318 (513)
.++|.||+|+++|++++++|+|++. .+ .+|||||+|+|.-+..+..+..+++
T Consensus 39 ~~~v~ip~g~~~G~~~rl~G~G~p~-~~-~~GDL~v~~~V~~P~~Ls~~q~~~l 90 (109)
T 3i38_A 39 SILLTVPPGSQAGQRLRIKGKGLVS-KT-HTGDLFAVIKIVMPTKPDEKARELW 90 (109)
T ss_dssp CEEEEECTTCCTTCEEEETTCSCBC-SS-CBCCEEEEEEECCCSSCCHHHHHHH
T ss_pred CEEEeeCCCcCcCeEEEECCccCCC-CC-CCcCEEEEEEEECCCCCCHHHHHHH
Confidence 3689999999999999999999986 33 7999999999998887665544443
No 45
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.72 E-value=5.4e-09 Score=92.04 Aligned_cols=55 Identities=22% Similarity=0.332 Sum_probs=41.3
Q ss_pred eEEEEEcCCC--CcCCCEEEEccccccCCCCCCCccEEEEEEEeeccc--cccccccce
Q 010330 264 RSMKVVIPPG--VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQG--IHRDGLNLF 318 (513)
Q Consensus 264 k~l~V~IP~G--v~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~--F~R~G~DL~ 318 (513)
+.++|+||+| +++|++++++|+|++...+...|||||+++|.-+.. +..+..+++
T Consensus 34 ~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~l 92 (121)
T 1xao_A 34 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKKL 92 (121)
T ss_dssp CEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHHH
T ss_pred CEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHH
Confidence 3578999999 999999999999998644436799999999998776 655554443
No 46
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.61 E-value=2.6e-08 Score=78.03 Aligned_cols=52 Identities=15% Similarity=0.183 Sum_probs=46.5
Q ss_pred CcccccccCCC---CCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccc
Q 010330 45 DYYSTLNVRQN---ATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDD 99 (513)
Q Consensus 45 d~Y~iLgv~~~---as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~ 99 (513)
+-|.||||+++ ++.++|++|||+|....|||+. +......+|++|++.|...
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG---GS~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG---GSFYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT---CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHHHH
Confidence 55889999999 9999999999999999999996 5667788999999999754
No 47
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.35 E-value=3.6e-07 Score=93.49 Aligned_cols=73 Identities=22% Similarity=0.399 Sum_probs=51.3
Q ss_pred ccccceEEEecCHHHHhcCCeeEEecc------CC--------cEEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEE
Q 010330 313 DGLNLFSKISVDYTEAILGTSMEVETV------EG--------MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLF 378 (513)
Q Consensus 313 ~G~DL~~~~~Isl~eAllG~~v~V~tl------dG--------~~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V 378 (513)
.|.||.+++.|+|.||..|++..|..- .| .++|+||+|+++|++++++|+|.|...+ +.+|||||
T Consensus 139 ~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~g-g~~GDL~v 217 (329)
T 3lz8_A 139 RGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENG-GPNGDLWL 217 (329)
T ss_dssp CCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC----CCCCCEEE
T ss_pred CCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCC-CCCCcEEE
Confidence 455666666666666666655444321 22 3678999999999999999999986543 46899999
Q ss_pred EEEEEcCC
Q 010330 379 IVNVLIPK 386 (513)
Q Consensus 379 ~f~V~~P~ 386 (513)
+++|.-..
T Consensus 218 ~I~v~~h~ 225 (329)
T 3lz8_A 218 VIHIAPHP 225 (329)
T ss_dssp EECCCCCS
T ss_pred EEEEecCC
Confidence 99887543
No 48
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.32 E-value=8.6e-07 Score=82.35 Aligned_cols=71 Identities=13% Similarity=0.259 Sum_probs=58.2
Q ss_pred cceEEEecCHHHHhcCCeeEEecc----CC-----cEEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCC
Q 010330 316 NLFSKISVDYTEAILGTSMEVETV----EG-----MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPK 386 (513)
Q Consensus 316 DL~~~~~Isl~eAllG~~v~V~tl----dG-----~~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~ 386 (513)
|+.+++.|||.||+.|++.+|.-- .| .++|+||+|+..|++++++|+|-|...+ +..|||||+++|.-..
T Consensus 2 d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g-g~~GDl~v~i~v~~h~ 80 (170)
T 1c3g_A 2 TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQT-GRRKTLQFVIQEKSHP 80 (170)
T ss_dssp EEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSS-SCBCEEEEEEEECCCS
T ss_pred CEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCCC-CccccEEEEEEEccCC
Confidence 789999999999999999887632 23 3689999999999999999999864332 4689999999997544
Q ss_pred C
Q 010330 387 D 387 (513)
Q Consensus 387 ~ 387 (513)
.
T Consensus 81 ~ 81 (170)
T 1c3g_A 81 N 81 (170)
T ss_dssp S
T ss_pred c
Confidence 3
No 49
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.31 E-value=1.1e-06 Score=82.51 Aligned_cols=74 Identities=16% Similarity=0.240 Sum_probs=59.0
Q ss_pred cccceEEEecCHHHHhcCCeeEEecc------------CCcEEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEE
Q 010330 314 GLNLFSKISVDYTEAILGTSMEVETV------------EGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVN 381 (513)
Q Consensus 314 G~DL~~~~~Isl~eAllG~~v~V~tl------------dG~~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~ 381 (513)
+.|+.+++.|||.||+.|++.+|.-- .-.++|+||+|+..|++++++|+|-+... .+..|||||+++
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~-gg~~GDl~v~i~ 81 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESP-GTSPGDLVLIIQ 81 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCTTCEEEETTCSCCSST-TSCCCEEEEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCC-CCccccEEEEEE
Confidence 67999999999999999998877632 12368899999999999999999987322 246899999999
Q ss_pred EEcCCCC
Q 010330 382 VLIPKDI 388 (513)
Q Consensus 382 V~~P~~l 388 (513)
|.-...+
T Consensus 82 ~~~h~~F 88 (180)
T 2q2g_A 82 TKTHPRF 88 (180)
T ss_dssp ECCCSSC
T ss_pred EEecccE
Confidence 9754433
No 50
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.28 E-value=1.3e-06 Score=81.96 Aligned_cols=73 Identities=14% Similarity=0.267 Sum_probs=57.1
Q ss_pred cccceEEEecCHHHHhcCCeeEEec------cCC--------cEEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEE
Q 010330 314 GLNLFSKISVDYTEAILGTSMEVET------VEG--------MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFI 379 (513)
Q Consensus 314 G~DL~~~~~Isl~eAllG~~v~V~t------ldG--------~~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~ 379 (513)
+.|+.+++.|||.||+.|++.+|.- -.| .++|+||+|+..|++++++|+|-+..+ +..|||||+
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~--g~~GDl~v~ 79 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSN--NIPADIVFV 79 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSS--SCCCCEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCC--CCcccEEEE
Confidence 5689999999999999999887752 234 157899999999999999999988653 468999999
Q ss_pred EEEEcCCCC
Q 010330 380 VNVLIPKDI 388 (513)
Q Consensus 380 f~V~~P~~l 388 (513)
++|.-...+
T Consensus 80 i~~~~h~~F 88 (181)
T 3agx_A 80 LKDKPHNIF 88 (181)
T ss_dssp EEECCCSSC
T ss_pred EEEeccccc
Confidence 999754443
No 51
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=97.81 E-value=2.7e-07 Score=101.97 Aligned_cols=78 Identities=18% Similarity=0.326 Sum_probs=59.5
Q ss_pred eEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCccccc---ccccCcccCcccEEEEE--------eecCCcce-eeee
Q 010330 168 RYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSN---CIQSCKACWGRGGVLKT--------QRTPFGLI-SQVS 235 (513)
Q Consensus 168 ~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~---~~~~C~~C~G~G~~~~~--------~~~~~g~~-~~~~ 235 (513)
.+++.|+|+|+++|.++++++.+.+.|..|+|+|++.+. .+.+|+.|+|+...... ...-.|.| +...
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~ 247 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS 247 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence 367889999999999999999999999999999999887 67899999999421100 00111333 3346
Q ss_pred cCCCCCCCcE
Q 010330 236 TCSKCGGDGK 245 (513)
Q Consensus 236 ~C~~C~G~G~ 245 (513)
.|..|+..+.
T Consensus 248 ~C~~CH~~~~ 257 (669)
T 3pmq_A 248 NCQTCHADNP 257 (669)
T ss_dssp CCTTTSCCCT
T ss_pred cchhhcCCcc
Confidence 7999998775
No 52
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.46 E-value=2.6e-05 Score=58.38 Aligned_cols=30 Identities=30% Similarity=0.798 Sum_probs=26.0
Q ss_pred eecCCCCCCCcEEEeeeeeecCCceEEeee
Q 010330 234 VSTCSKCGGDGKIIIDHCRRCGGNGEVQSK 263 (513)
Q Consensus 234 ~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~ 263 (513)
..+|+.|+|+|+++.++|+.|+|.|++.+.
T Consensus 9 ~~~C~~C~GsG~~i~~~C~~C~G~G~v~~~ 38 (53)
T 3lcz_A 9 ETTCPNCNGSGREEPEPCPKCLGKGVILTA 38 (53)
T ss_dssp EEECTTTTTSCEETTEECTTTTTSSEEECH
T ss_pred eccCcCCcccccCCCCcCCCCCCcEEEEEE
Confidence 478999999999999999999999987653
No 53
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=97.37 E-value=9e-05 Score=59.59 Aligned_cols=47 Identities=30% Similarity=0.800 Sum_probs=37.2
Q ss_pred cccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEe--------eeeeecCCceEEe
Q 010330 206 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--------DHCRRCGGNGEVQ 261 (513)
Q Consensus 206 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~--------~~C~~C~G~G~v~ 261 (513)
.....|+.|+|+|... .....+|+.|+|+|+++. ..|+.|+|.|.+.
T Consensus 9 ~~~~~C~~C~G~G~~~---------~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~ 63 (79)
T 1exk_A 9 PTLEECDVCHGSGAKP---------GTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI 63 (79)
T ss_dssp CCEEECGGGTTTSBCS---------SSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC
T ss_pred ccceECCCCcccccCC---------CccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEEC
Confidence 3567999999999642 122468999999999875 4799999999764
No 54
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.28 E-value=9.1e-05 Score=62.99 Aligned_cols=47 Identities=32% Similarity=0.820 Sum_probs=36.7
Q ss_pred eeeccCCCCCCcccc-----cccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEee
Q 010330 191 FETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID 249 (513)
Q Consensus 191 ~~~C~~C~GtG~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~ 249 (513)
...|+.|+|+|.... ....+|+.|+|+|.++. .+|+.|+|.|.+...
T Consensus 45 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~G~v~~~ 96 (104)
T 2ctt_A 45 VQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIII------------SPCVVCRGAGQAKQK 96 (104)
T ss_dssp CEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEECS------------SCCSSSSSCSEECCC
T ss_pred CccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceECC------------CcCCCCCCeeEEEEE
Confidence 467999999996521 13468999999998752 579999999988543
No 55
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=97.14 E-value=4.4e-05 Score=57.19 Aligned_cols=36 Identities=31% Similarity=0.671 Sum_probs=22.3
Q ss_pred eeccCCCCCCcccccccccCcccCcccEEEEEe-ecCCcc
Q 010330 192 ETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ-RTPFGL 230 (513)
Q Consensus 192 ~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~-~~~~g~ 230 (513)
..|+.|+|+|.... .+|+.|+|+|+++..+ ++.+|+
T Consensus 10 ~~C~~C~GsG~~~~---~~C~~C~G~G~v~~~qG~~~~g~ 46 (53)
T 2bx9_A 10 VACPKCERAGEIEG---TPCPACSGKGVILTAQGYTLLDF 46 (53)
T ss_dssp EECTTTTTSSEETT---EECTTTTTSSEEECHHHHHHHHH
T ss_pred ccCCCCcceeccCC---CCCccCCCCccEEEEecccHHHH
Confidence 46777777777642 5677777777765544 334443
No 56
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.69 E-value=0.00059 Score=50.99 Aligned_cols=27 Identities=33% Similarity=0.779 Sum_probs=14.2
Q ss_pred ecCCCCCCCcEEEeeeeeecCCceEEe
Q 010330 235 STCSKCGGDGKIIIDHCRRCGGNGEVQ 261 (513)
Q Consensus 235 ~~C~~C~G~G~~i~~~C~~C~G~G~v~ 261 (513)
.+|+.|+|+|.++...|+.|+|.|.+.
T Consensus 10 ~~C~~C~GsG~~~~~~C~~C~G~G~v~ 36 (53)
T 2bx9_A 10 VACPKCERAGEIEGTPCPACSGKGVIL 36 (53)
T ss_dssp EECTTTTTSSEETTEECTTTTTSSEEE
T ss_pred ccCCCCcceeccCCCCCccCCCCccEE
Confidence 345555555555555555555555443
No 57
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=96.04 E-value=0.0034 Score=46.84 Aligned_cols=26 Identities=35% Similarity=1.038 Sum_probs=12.6
Q ss_pred eeccCCCCCCcccccccccCcccCcccEE
Q 010330 192 ETCDSCGGTGAKSSNCIQSCKACWGRGGV 220 (513)
Q Consensus 192 ~~C~~C~GtG~~~~~~~~~C~~C~G~G~~ 220 (513)
.+|+.|+|+|.... ..|+.|+|+|.+
T Consensus 10 ~~C~~C~GsG~~i~---~~C~~C~G~G~v 35 (53)
T 3lcz_A 10 TTCPNCNGSGREEP---EPCPKCLGKGVI 35 (53)
T ss_dssp EECTTTTTSCEETT---EECTTTTTSSEE
T ss_pred ccCcCCcccccCCC---CcCCCCCCcEEE
Confidence 34555555554432 345555555543
No 58
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=89.65 E-value=0.16 Score=56.11 Aligned_cols=50 Identities=16% Similarity=0.195 Sum_probs=39.6
Q ss_pred ccccccCcccccccCCCCCH--HHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHh
Q 010330 39 IRAAGTDYYSTLNVRQNATL--QEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEV 95 (513)
Q Consensus 39 ~~~~~~d~Y~iLgv~~~as~--~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~Ayev 95 (513)
+....+|||.+||++.++.. .+|++|||+||+..+++ ++++..+..|+.|
T Consensus 624 ~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 624 LKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp HTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred HHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 34556789999999776655 77999999999975444 4788888888876
No 59
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=64.79 E-value=13 Score=38.54 Aligned_cols=26 Identities=23% Similarity=0.353 Sum_probs=18.9
Q ss_pred CeeEEeccCCcEEEEeCCCCCCCCEEEEcc
Q 010330 332 TSMEVETVEGMKDLRIPSGVQPGDTVKLQQ 361 (513)
Q Consensus 332 ~~v~V~tldG~~~l~Ip~g~qpG~~~~l~g 361 (513)
+++.||-|+ +.||||++-|..=.|.|
T Consensus 295 a~i~IPEL~----lei~pg~~~G~~TTVEG 320 (404)
T 2qkd_A 295 CSVEIPELE----FELGMAVLGGKFTTLEG 320 (404)
T ss_dssp CEEEEGGGT----EEECTTTTCSEEEEHHH
T ss_pred eEEEeeeee----EEecCCCCCceEEeHHH
Confidence 567777764 88999988777666655
No 60
>3nyb_B Protein AIR2; polya RNA polymerase, zinc knuckle protein, RNA surveillance binds to TRF4P/AIR2P heterodimer; 2.70A {Saccharomyces cerevisiae}
Probab=44.67 E-value=13 Score=29.89 Aligned_cols=55 Identities=20% Similarity=0.360 Sum_probs=29.4
Q ss_pred eeeeccCCCCCCcccccccc--cCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEe
Q 010330 190 CFETCDSCGGTGAKSSNCIQ--SCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII 248 (513)
Q Consensus 190 r~~~C~~C~GtG~~~~~~~~--~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~ 248 (513)
+.+.|..|...|-.....+. .|..|...|.+.+....+. ....|-.|+..|++-.
T Consensus 4 k~~~C~~Cg~~GH~~~~Cp~~~rcY~c~~~gh~~~~c~~p~----~~~~CYnCG~~GH~~r 60 (83)
T 3nyb_B 4 KKVQCTLCKSKKHSKERCPSIWRAYILVDDNEKAKPKVLPF----HTIYCYNCGGKGHFGD 60 (83)
T ss_dssp ---CCSSSCCSSSCGGGCGGGTCCCCBC-----------------CCCBCSSSSCBSSCGG
T ss_pred ccCCCCCCCCCCCccccCCCcccccccccCCcccccccCCC----CCCeecccCCCCcCcc
Confidence 35679999999887665433 6888988887643322221 2367999999887544
No 61
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=35.83 E-value=2.3 Score=45.70 Aligned_cols=66 Identities=21% Similarity=0.392 Sum_probs=38.6
Q ss_pred eccCCCCCCcccc----cccccCcccCcccEEEEEe---ecCCcceeeeecCCCCCCCcEEEeeeeeecCCce
Q 010330 193 TCDSCGGTGAKSS----NCIQSCKACWGRGGVLKTQ---RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNG 258 (513)
Q Consensus 193 ~C~~C~GtG~~~~----~~~~~C~~C~G~G~~~~~~---~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G 258 (513)
.|..||+.+.... .....|-.||+....+... ..+.........|..||..-......|..|+...
T Consensus 14 ~C~~CH~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~h~~~~~~~~C~~CH~~h~~~~~~c~~ch~~~ 86 (566)
T 1qo8_A 14 SCQSCHAKPIKVTDSETHENAQCKSCHGEYAELANDKLQFDPHNSHLGDINCTSCHKGHEEPKFYCNECHSFD 86 (566)
T ss_dssp CGGGTSCSSCCCCTTCHHHHHHHHHHHCCHHHHCCSSSSSCTTSSTTCSCCGGGTSCSSSCCCCGGGGTCCCC
T ss_pred ChhhhCCCccccccccCccCCHHhhhCcCHHHHhhccccCCcchhcCCCCCchhhCcCCcCcCchhhhhcCCC
Confidence 6999999875422 1244799999863221100 0010000113589999976554556799998754
No 62
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=35.65 E-value=1.2e+02 Score=29.35 Aligned_cols=16 Identities=44% Similarity=1.024 Sum_probs=11.1
Q ss_pred cceeeeecCCCCCCCc
Q 010330 229 GLISQVSTCSKCGGDG 244 (513)
Q Consensus 229 g~~~~~~~C~~C~G~G 244 (513)
+.+.....|+.|++.|
T Consensus 151 ~~~~~P~~Cp~C~~~~ 166 (279)
T 1ltl_A 151 NMITEPSLCSECGGRS 166 (279)
T ss_dssp SSCCCCSCCTTTCCCC
T ss_pred CcccCCCcCCCCCCCC
Confidence 3444456788888887
No 63
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=35.53 E-value=4.7 Score=43.27 Aligned_cols=65 Identities=18% Similarity=0.393 Sum_probs=37.8
Q ss_pred eccCCCCCCcccc-----cccccCcccCcccEEEEEe-----ecCCc-ceeeeecCCCCCCCcEEEeeeeeecCCc
Q 010330 193 TCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQ-----RTPFG-LISQVSTCSKCGGDGKIIIDHCRRCGGN 257 (513)
Q Consensus 193 ~C~~C~GtG~~~~-----~~~~~C~~C~G~G~~~~~~-----~~~~g-~~~~~~~C~~C~G~G~~i~~~C~~C~G~ 257 (513)
.|..||+...... .....|..||......... ..+.. .......|..||..=......|..|+-.
T Consensus 13 ~C~~CH~~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~~~h~~H~~~~~~C~~CH~~h~~~~~~C~~CH~~ 88 (571)
T 1y0p_A 13 ECDSCHTPDGELSNDSLTYENTQCVSCHGTLAEVAETTKHEHYNAHASHFPGEVACTSCHSAHEKSMVYCDSCHSF 88 (571)
T ss_dssp CGGGTSCTTCCCCCTTCHHHHHHHHHHHCCHHHHHTTSCCSSCCTTSCSCCSCCCGGGTCCSSSCBCCGGGGTCCC
T ss_pred ChhhcCCCcccccccccccccchhhhhCcChhhcccccccccCCccccccCCCCCccccCccccCCCccccccChh
Confidence 6999999864321 1346899999864211000 00000 0111358999997644445679999865
No 64
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=31.38 E-value=31 Score=27.89 Aligned_cols=25 Identities=20% Similarity=0.258 Sum_probs=22.3
Q ss_pred EEEcCCCCChhHHHHHHHHHhhcCC
Q 010330 381 NVLIPKDISDPERALVEEIAFLKSP 405 (513)
Q Consensus 381 ~V~~P~~ls~~qr~lLe~l~~~~~~ 405 (513)
.+.||..|+..||.++-++++-..-
T Consensus 35 ~l~FP~sLs~~eR~~IH~lA~~~GL 59 (86)
T 1msz_A 35 QLEFPPSLNSHDRLRVHQIAEEHGL 59 (86)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHTTE
T ss_pred EEEcCCCCCHHHHHHHHHHHHHcCC
Confidence 6899999999999999999987643
No 65
>2vl6_A SSO MCM N-TER, minichromosome maintenance protein MCM; helicase, hydrolase, zinc-finger, ATP-binding, DNA-BIND ssDNA binding; 2.8A {Sulfolobus solfataricus}
Probab=29.72 E-value=1.9e+02 Score=27.56 Aligned_cols=85 Identities=14% Similarity=0.246 Sum_probs=41.1
Q ss_pred cccC--cccCcccEEEEEe--ecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEE-----cCCCCcCCC
Q 010330 208 IQSC--KACWGRGGVLKTQ--RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVV-----IPPGVSNGA 278 (513)
Q Consensus 208 ~~~C--~~C~G~G~~~~~~--~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~-----IP~Gv~~G~ 278 (513)
...| ..|+.. +... ....+.+.....|+.|+..|...... ..| ......+++|. +|+|--+-+
T Consensus 141 ~f~C~~~~C~~~---~~~~~~~~~~~~~~~P~~Cp~C~~~~~~~l~~-~~s----~f~D~Q~ikiQE~pe~vp~G~~Prs 212 (268)
T 2vl6_A 141 TYKHIHPDCMQE---FEWPEDEEMPEVLEMPTICPKCGKPGQFRLIP-EKT----KLIDWQKAVIQERPEEVPSGQLPRQ 212 (268)
T ss_dssp EEEEECTTCCCE---EESSTTSCCCTTCCCCSBCTTTCCBCEEEECG-GGC----EEEEEEEEEEECCGGGSCTTSCCCE
T ss_pred EEECCCCCCCCE---EeeeecccCCCcccCCccCCCCCCCCCEEEec-Ccc----EEEeeEEEEEEeCCCCCCCCCCCcE
Confidence 4578 888743 2211 01234455557899999887433221 011 12223455553 444443322
Q ss_pred EEEEccccccCCCCCCCccEEEEE
Q 010330 279 TMQIRGEGNFDRRRSLAGDLFVAL 302 (513)
Q Consensus 279 ~Irl~G~G~~~~~gg~~GDL~V~I 302 (513)
+.+-=.++-- ....|||-+...
T Consensus 213 -i~v~l~~dLv-d~~~PGDrV~vt 234 (268)
T 2vl6_A 213 -LEIILEDDLV-DSARPGDRVKVT 234 (268)
T ss_dssp -EEEEEEGGGT-TSSCTTCEEEEE
T ss_pred -EEEEEccCcc-CcccCCCEEEEE
Confidence 3333333321 345688887744
No 66
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=29.12 E-value=7.3 Score=41.89 Aligned_cols=64 Identities=22% Similarity=0.446 Sum_probs=36.7
Q ss_pred eccCCCCCCccc--cc----ccccCcccCcccEEE-----EEeecCCccee-eeecCCCCCCCcEEEeeeeeecCC
Q 010330 193 TCDSCGGTGAKS--SN----CIQSCKACWGRGGVL-----KTQRTPFGLIS-QVSTCSKCGGDGKIIIDHCRRCGG 256 (513)
Q Consensus 193 ~C~~C~GtG~~~--~~----~~~~C~~C~G~G~~~-----~~~~~~~g~~~-~~~~C~~C~G~G~~i~~~C~~C~G 256 (513)
.|..||+..... .. ....|..|++.-... .....++..+. ....|..|+-.-......|..|+-
T Consensus 15 ~C~~CH~~~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~np~~~~~~g~v~C~~Ch~~~~~~~~~c~~ch~ 90 (572)
T 1d4d_A 15 GCDSCHVSDKGGVTNDNLTHENGQCVSCHGDLKELAAAAPKDKVSPHKSHLIGEIACTSCHKGHEKSVAYCDACHS 90 (572)
T ss_dssp CSTTTSSSSSCCCSSTTCHHHHHHHHHHHCCHHHHHHHCC---CBTTBSSCCSCCCGGGTSCSSSCCCCGGGGTCC
T ss_pred ChhhhCCCCcCCCcccccccccchhhhhCCCHHHhhhhccccccCCchhhcCCCCCcccccccccCCCCccccccc
Confidence 699999886321 11 346899999872110 01123333331 234899998654333456999975
No 67
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=27.12 E-value=82 Score=27.16 Aligned_cols=43 Identities=16% Similarity=0.405 Sum_probs=31.5
Q ss_pred EEEeCCCCCCCCEEEEccCCCCCCCC--------CCCCCcEEEEEEEEcCC
Q 010330 344 DLRIPSGVQPGDTVKLQQMGVPDINN--------PSVRGDHLFIVNVLIPK 386 (513)
Q Consensus 344 ~l~Ip~g~qpG~~~~l~g~G~P~~~~--------~~~rGDL~V~f~V~~P~ 386 (513)
...||.|.+||+.++|.|.=.|..+. .....|+-++|++.|.+
T Consensus 9 ~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~~ 59 (138)
T 3zxf_A 9 KSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDT 59 (138)
T ss_dssp EEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETTT
T ss_pred EeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcCC
Confidence 45789999999999999974433221 11356999999999964
No 68
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=25.97 E-value=45 Score=26.20 Aligned_cols=53 Identities=15% Similarity=0.434 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCC---cchHHHHHHHHHHHHhhccc-hhhhhccccc
Q 010330 56 ATLQEIKTSYRKLARKYHPDINKS---PGAEEKFKEISSAYEVLSDD-EKRSVYDRFG 109 (513)
Q Consensus 56 as~~eIk~ayr~la~k~HPD~n~~---~~a~~~f~~i~~AyevL~d~-~kR~~YD~~G 109 (513)
.-+.-++.+|+.+.+...|..... ..+...|..-. +|..+.++ +++.+|+.|=
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi 62 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFM 62 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHH
Confidence 456778999999998888887654 24555555544 79999775 5567888773
No 69
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=25.96 E-value=59 Score=31.56 Aligned_cols=11 Identities=36% Similarity=0.887 Sum_probs=8.4
Q ss_pred eeeecCCceEE
Q 010330 250 HCRRCGGNGEV 260 (513)
Q Consensus 250 ~C~~C~G~G~v 260 (513)
.|+.|++.+..
T Consensus 158 ~Cp~C~~~~f~ 168 (279)
T 1ltl_A 158 LCSECGGRSFR 168 (279)
T ss_dssp CCTTTCCCCEE
T ss_pred cCCCCCCCCcE
Confidence 59999988743
No 70
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=22.23 E-value=95 Score=23.94 Aligned_cols=52 Identities=23% Similarity=0.371 Sum_probs=31.5
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHH--HHHhhccc-hhhhhcccc
Q 010330 55 NATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISS--AYEVLSDD-EKRSVYDRF 108 (513)
Q Consensus 55 ~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~--AyevL~d~-~kR~~YD~~ 108 (513)
-+|.+|.+.+|++|...++-+.. -.=++..+.|.. -|.+|.++ ++++.|+.|
T Consensus 11 ~~t~eea~~~F~~LL~e~~V~~~--~tWe~~~~~i~~DpRY~al~~~~eRk~~F~ey 65 (71)
T 1uzc_A 11 WNTKEEAKQAFKELLKEKRVPSN--ASWEQAMKMIINDPRYSALAKLSEKKQAFNAY 65 (71)
T ss_dssp CCSHHHHHHHHHHHHHHTTCCTT--CCHHHHHHHHHTSGGGGGCSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCcCCC--CCHHHHHHHHccCccccccCCHHHHHHHHHHH
Confidence 47999999999999998864432 111222222222 36677653 455666665
No 71
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=21.32 E-value=56 Score=33.03 Aligned_cols=27 Identities=7% Similarity=0.228 Sum_probs=21.7
Q ss_pred cCcccccccCCCCCHHHHHHHHHHHHHHh
Q 010330 44 TDYYSTLNVRQNATLQEIKTSYRKLARKY 72 (513)
Q Consensus 44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~ 72 (513)
..++++|.. +.+.++|+..++.+...|
T Consensus 219 ~~W~~~~~~--~vt~~~l~~i~~~il~~y 245 (358)
T 2pk2_A 219 KHWWEYVDA--TVTLELLDELTHEFLQIL 245 (358)
T ss_dssp CCTTTTSCS--SCCHHHHHHHHHHHHHHT
T ss_pred cchHHHHhc--cCCHHHHHHHHHHHHHHH
Confidence 457887743 468999999999999887
No 72
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A*
Probab=21.14 E-value=1.4e+02 Score=26.22 Aligned_cols=44 Identities=7% Similarity=0.169 Sum_probs=30.8
Q ss_pred EEEEeCCCCCCCCEEEEccCCCCC-CCC-----CCCCCcEEEEEEEEcCC
Q 010330 343 KDLRIPSGVQPGDTVKLQQMGVPD-INN-----PSVRGDHLFIVNVLIPK 386 (513)
Q Consensus 343 ~~l~Ip~g~qpG~~~~l~g~G~P~-~~~-----~~~rGDL~V~f~V~~P~ 386 (513)
..+.||.|.++|+.++|.|.=++. .+. ....+|+.++|++.|.+
T Consensus 9 ~~~~ip~gl~~G~~i~I~G~~~~~~a~rF~INl~~g~~dialHfnpRf~~ 58 (150)
T 2wkk_A 9 NQVKLQNDFKPESVAAIRSSAFNSKGGTTVFNFLSAGENILLHISIRPGE 58 (150)
T ss_dssp EEEEEEEEECTTCEEEEECSCCCTTCCCEEEEEECTTCCEEEEEEEETTT
T ss_pred cceecCCCCcCCCEEEEEEEECCCCCCEEEEEEecCCCCEEEEEeeecCC
Confidence 357788899999999999953321 111 01234999999999984
Done!