Your job contains 1 sequence.
>010331
MASIALSASAALLPLKRNSGAWSKLFPFSSKSYLSFKTCRKNRFISFAASNSSGRNGDLV
VTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF
VFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGG
TVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFE
RLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVK
QPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRL
HDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNL
WAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLDGPIGHSARKLAYLIRLPTD
EHRLKVGVSWLTKSAIDSVALLQSTLTKVLSSS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010331
(513 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|SO_3517 - symbol:SO_3517 "NADH dehydrogenase" sp... 139 5.5e-15 2
TIGR_CMR|GSU_0493 - symbol:GSU_0493 "pyridine nucleotide-... 158 7.5e-14 2
UNIPROTKB|Q81XC7 - symbol:BAS4935 "Pyridine nucleotide-di... 154 3.4e-13 2
TIGR_CMR|BA_5313 - symbol:BA_5313 "pyridine nucleotide-di... 154 3.4e-13 2
UNIPROTKB|Q81XS1 - symbol:BAS4796 "Pyridine nucleotide-di... 123 3.9e-12 2
TIGR_CMR|BA_5159 - symbol:BA_5159 "pyridine nucleotide-di... 123 3.9e-12 2
UNIPROTKB|P00393 - symbol:ndh species:83333 "Escherichia ... 175 3.1e-10 1
TAIR|locus:2045708 - symbol:NDA2 "AT2G29990" species:3702... 145 4.0e-10 2
ASPGD|ASPL0000028441 - symbol:ndiA species:162425 "Emeric... 113 1.4e-09 2
TAIR|locus:2007427 - symbol:NDA1 "AT1G07180" species:3702... 127 1.8e-09 2
UNIPROTKB|Q4K5W5 - symbol:ndh "NADH dehydrogenase" specie... 105 5.6e-08 2
DICTYBASE|DDB_G0295661 - symbol:DDB_G0295661 "pyridine nu... 99 6.2e-08 3
UNIPROTKB|Q9KQV8 - symbol:VC1890 "NADH dehydrogenase" spe... 110 2.1e-07 2
TIGR_CMR|VC_1890 - symbol:VC_1890 "NADH dehydrogenase" sp... 110 2.1e-07 2
UNIPROTKB|Q48ND0 - symbol:ndh "NADH dehydrogenase" specie... 145 6.5e-07 1
UNIPROTKB|P95160 - symbol:ndh "PROBABLE NADH DEHYDROGENAS... 107 8.8e-07 2
UNIPROTKB|P95200 - symbol:ndhA "NADH dehydrogenase" speci... 96 1.4e-06 2
TAIR|locus:2051431 - symbol:NDB4 "AT2G20800" species:3702... 118 1.4e-06 2
SGD|S000004589 - symbol:NDI1 "NADH:ubiquinone oxidoreduct... 100 2.1e-06 2
POMBASE|SPAC3A11.07 - symbol:SPAC3A11.07 "NADH dehydrogen... 97 2.6e-06 3
DICTYBASE|DDB_G0270104 - symbol:DDB_G0270104 "putative NA... 128 7.7e-06 2
TAIR|locus:2119667 - symbol:NDB3 "AT4G21490" species:3702... 100 1.5e-05 3
UNIPROTKB|O07220 - symbol:MT1860 "NADH dehydrogenase-like... 85 0.00048 2
UNIPROTKB|G4N3S3 - symbol:MGG_04999 "Uncharacterized prot... 84 0.00060 2
>TIGR_CMR|SO_3517 [details] [associations]
symbol:SO_3517 "NADH dehydrogenase" species:211586
"Shewanella oneidensis MR-1" [GO:0003954 "NADH dehydrogenase
activity" evidence=ISS] InterPro:IPR001327 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368
GO:GO:0050660 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003954
HOGENOM:HOG000157010 KO:K03885 OMA:EPRQIEY RefSeq:NP_719064.1
ProteinModelPortal:Q8EBJ7 GeneID:1171190 KEGG:son:SO_3517
PATRIC:23526724 ProtClustDB:CLSK907203 Uniprot:Q8EBJ7
Length = 429
Score = 139 (54.0 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 37/118 (31%), Positives = 56/118 (47%)
Query: 331 ESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGD 390
+ + +A L +W G K P LP+ R Q E D + VKG I+A+GD
Sbjct: 256 DGDMIKASLKVWAAGVKG--PKAF---QNFSKLPITPRNQVEVDACMRVKGQQDIYAIGD 310
Query: 391 SSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDA 448
+ L SG+P+P AQ A Q AD N+ + + PF +++ G ++ L R A
Sbjct: 311 CALLILDSGQPVPPRAQAAAQMADTLYENIVNRLQGKVEKPFVYKDYGSLVSLSRFSA 368
Score = 127 (49.8 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 42/144 (29%), Positives = 67/144 (46%)
Query: 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIA 140
RI I+GGG GL A +L + D V L+D+S ++KP L+E+ G +D
Sbjct: 5 RIVIVGGGAAGLALASKLGRKLGGSDVV-DVCLIDKSPIHIWKPKLHEVAVGVIDQSIEG 63
Query: 141 PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG 200
+ D G ++ + ++ C D + + G +LLE I EYD+LVL+LG
Sbjct: 64 LLYRDHGLKNGYRYLRGEIEQ-CDPDTKTIRLAAVYSDSGELLLEPRQI-EYDFLVLALG 121
Query: 201 AEPKLDVVPGAAEFAFPFSTLEDA 224
GA + +L++A
Sbjct: 122 GVSNSFNTLGAEQHCIFLDSLDNA 145
>TIGR_CMR|GSU_0493 [details] [associations]
symbol:GSU_0493 "pyridine nucleotide-disulphide
oxidoreductase family protein" species:243231 "Geobacter
sulfurreducens PCA" [GO:0008152 "metabolic process" evidence=ISS]
[GO:0015036 "disulfide oxidoreductase activity" evidence=ISS]
InterPro:IPR001327 InterPro:IPR013027 InterPro:IPR023753
Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368 GO:GO:0050660
GO:GO:0016491 EMBL:AE017180 GenomeReviews:AE017180_GR KO:K03885
HOGENOM:HOG000241051 RefSeq:NP_951552.1 ProteinModelPortal:Q74FV9
GeneID:2686089 KEGG:gsu:GSU0493 PATRIC:22023739 OMA:CNENGIA
ProtClustDB:CLSK2306724 BioCyc:GSUL243231:GH27-500-MONOMER
Uniprot:Q74FV9
Length = 419
Score = 158 (60.7 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 42/126 (33%), Positives = 65/126 (51%)
Query: 366 NARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 425
N G+ + L + GHP ++ +GD + L + G PLP A VA Q AG ++ A
Sbjct: 273 NPGGRIAVEPDLTLPGHPDVYVVGDMAWL-EQDGAPLPMVAPVAMQMGIHAGKSILAREQ 331
Query: 426 DRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLDGPIGHSARKLAYLIRLPTDEHRLK 485
P PFR+ + G M +GR+ AAV+ +F G+ L G A L +L L +R+
Sbjct: 332 GAPAPPFRYHDKGSMATIGRS-AAVASAF--GMNLRGYAAWIAWLLLHLYYLIGFRNRIV 388
Query: 486 VGVSWL 491
V ++W+
Sbjct: 389 VMLNWI 394
Score = 95 (38.5 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 42/148 (28%), Positives = 70/148 (47%)
Query: 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIA 140
R+ I+G GFGG+ A L K V+LVD++ +F+P+LY++ + ++ IA
Sbjct: 3 RVVIIGMGFGGIRAARTLAQ------KGLDVVLVDRNNYHLFQPLLYQVATAGLEQESIA 56
Query: 141 -PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSL 199
P A TG +F +L ++ GV+ V+ ++G I YD+LV+
Sbjct: 57 YPVRAMARGWTGTRF-----QL---AEVTGVD-----FEARQVVTDNGTI-PYDYLVIGA 102
Query: 200 GAEPKLDVVPGAAEFAFPFSTLEDACRV 227
G+ + + AF L DA R+
Sbjct: 103 GSVTNYFGLKSVEQHAFDLKELVDAERL 130
>UNIPROTKB|Q81XC7 [details] [associations]
symbol:BAS4935 "Pyridine nucleotide-disulphide
oxidoreductase" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001327
InterPro:IPR013027 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PRINTS:PR00368 GO:GO:0050660 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016491 RefSeq:NP_847489.1
RefSeq:YP_021971.1 RefSeq:YP_031176.1 ProteinModelPortal:Q81XC7
DNASU:1084810 EnsemblBacteria:EBBACT00000011590
EnsemblBacteria:EBBACT00000017405 EnsemblBacteria:EBBACT00000020825
GeneID:1084810 GeneID:2818711 GeneID:2849501 KEGG:ban:BA_5313
KEGG:bar:GBAA_5313 KEGG:bat:BAS4935 HOGENOM:HOG000067325
OMA:STSHKDV ProtClustDB:CLSK887106
BioCyc:BANT260799:GJAJ-5011-MONOMER
BioCyc:BANT261594:GJ7F-5182-MONOMER Uniprot:Q81XC7
Length = 392
Score = 154 (59.3 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 34/89 (38%), Positives = 48/89 (53%)
Query: 363 LPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422
L +N RG+A D L H +F GDS+ + GRP P TAQ+A+Q + G+NL+A
Sbjct: 269 LEVN-RGRATVDAYLQSTSHKNVFVAGDSAVVFAPDGRPYPPTAQIAWQMGELIGYNLYA 327
Query: 423 AINDRPLLPFRFQNLGEMMILGRNDAAVS 451
A+ + F N G + LGR DA +
Sbjct: 328 ALEGKAFEEFAPVNSGTLASLGRKDAVAT 356
Score = 92 (37.4 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 37/147 (25%), Positives = 60/147 (40%)
Query: 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIA 140
+I ILG G+GGL AL + + + QV +++Q L+ L +G V +A
Sbjct: 4 QIVILGAGYGGLLAALNVRK--YYSKSEAQVTVINQYPTHQIITELHRLAAGNVSEQAVA 61
Query: 141 PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG 200
L KD + + V+ GGT L YD LV++LG
Sbjct: 62 RPLTKLFKG------KDIDLKIATVESFSVDSKEIKLAGGTTL-------SYDALVVALG 108
Query: 201 AEPKLDVVPGAAEFAFPFSTLEDACRV 227
++ +PG E + + DA ++
Sbjct: 109 SKTAYFGIPGLEENSMVLKSAADANKI 135
>TIGR_CMR|BA_5313 [details] [associations]
symbol:BA_5313 "pyridine nucleotide-disulphide
oxidoreductase" species:198094 "Bacillus anthracis str. Ames"
[GO:0008150 "biological_process" evidence=ND] [GO:0015036
"disulfide oxidoreductase activity" evidence=ISS]
InterPro:IPR001327 InterPro:IPR013027 InterPro:IPR023753
Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368 GO:GO:0050660
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0016491
RefSeq:NP_847489.1 RefSeq:YP_021971.1 RefSeq:YP_031176.1
ProteinModelPortal:Q81XC7 DNASU:1084810
EnsemblBacteria:EBBACT00000011590 EnsemblBacteria:EBBACT00000017405
EnsemblBacteria:EBBACT00000020825 GeneID:1084810 GeneID:2818711
GeneID:2849501 KEGG:ban:BA_5313 KEGG:bar:GBAA_5313 KEGG:bat:BAS4935
HOGENOM:HOG000067325 OMA:STSHKDV ProtClustDB:CLSK887106
BioCyc:BANT260799:GJAJ-5011-MONOMER
BioCyc:BANT261594:GJ7F-5182-MONOMER Uniprot:Q81XC7
Length = 392
Score = 154 (59.3 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 34/89 (38%), Positives = 48/89 (53%)
Query: 363 LPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422
L +N RG+A D L H +F GDS+ + GRP P TAQ+A+Q + G+NL+A
Sbjct: 269 LEVN-RGRATVDAYLQSTSHKNVFVAGDSAVVFAPDGRPYPPTAQIAWQMGELIGYNLYA 327
Query: 423 AINDRPLLPFRFQNLGEMMILGRNDAAVS 451
A+ + F N G + LGR DA +
Sbjct: 328 ALEGKAFEEFAPVNSGTLASLGRKDAVAT 356
Score = 92 (37.4 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 37/147 (25%), Positives = 60/147 (40%)
Query: 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIA 140
+I ILG G+GGL AL + + + QV +++Q L+ L +G V +A
Sbjct: 4 QIVILGAGYGGLLAALNVRK--YYSKSEAQVTVINQYPTHQIITELHRLAAGNVSEQAVA 61
Query: 141 PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG 200
L KD + + V+ GGT L YD LV++LG
Sbjct: 62 RPLTKLFKG------KDIDLKIATVESFSVDSKEIKLAGGTTL-------SYDALVVALG 108
Query: 201 AEPKLDVVPGAAEFAFPFSTLEDACRV 227
++ +PG E + + DA ++
Sbjct: 109 SKTAYFGIPGLEENSMVLKSAADANKI 135
>UNIPROTKB|Q81XS1 [details] [associations]
symbol:BAS4796 "Pyridine nucleotide-disulphide
oxidoreductase" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001327
InterPro:IPR013027 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PRINTS:PR00368 GO:GO:0050660 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016491 HOGENOM:HOG000067325
RefSeq:NP_847345.1 RefSeq:YP_021813.2 RefSeq:YP_031039.1
ProteinModelPortal:Q81XS1 DNASU:1084541
EnsemblBacteria:EBBACT00000011972 EnsemblBacteria:EBBACT00000015824
EnsemblBacteria:EBBACT00000023764 GeneID:1084541 GeneID:2819361
GeneID:2848272 KEGG:ban:BA_5159 KEGG:bar:GBAA_5159 KEGG:bat:BAS4796
OMA:VPELCKQ ProtClustDB:CLSK873604
BioCyc:BANT260799:GJAJ-4874-MONOMER
BioCyc:BANT261594:GJ7F-5036-MONOMER Uniprot:Q81XS1
Length = 403
Score = 123 (48.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 33/123 (26%), Positives = 60/123 (48%)
Query: 329 GLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNA-RGQAETDETLCVKGHPRIFA 387
G ++++ +++ V+W G + N + + A RG+ + DE + G+ +F
Sbjct: 245 GDDTELIKSETVVWAAGVRG--------NGIVEESGFEAMRGRVKVDEYMHAPGYEDVFM 296
Query: 388 LGDSSAL-RDSSGRPLPATAQVAFQQADFAGWNLWAAINDR-PLLPFRFQNLGEMMILGR 445
+GD++ + + RP P TAQ+A QQ NL + + + F F N G + LG
Sbjct: 297 VGDAALIINEEINRPYPPTAQIAIQQGYNIAHNLTVLVRGKGEMKKFVFDNKGSVCSLGH 356
Query: 446 NDA 448
+DA
Sbjct: 357 DDA 359
Score = 116 (45.9 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 36/144 (25%), Positives = 69/144 (47%)
Query: 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAW 137
K P+I +LG G+GG+ T +RL+ + ++ ++ LV+ + L+E +G +
Sbjct: 3 KTPKIVVLGAGYGGMITTVRLQKALSVNEA--EITLVNNNSYHYQATWLHESAAGTLQDE 60
Query: 138 EIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVL 197
+I D++ V F +D V + ++ ++L+ G + EYD+LV+
Sbjct: 61 KICLDIQDVIDTNKVNFVQDTVVEIKAAEK-------------RIILKDGEL-EYDYLVI 106
Query: 198 SLGAEPKLDVVPGAAEFAFPFSTL 221
LG E + + G E AF + +
Sbjct: 107 GLGFESETFGITGLKEHAFSIANI 130
>TIGR_CMR|BA_5159 [details] [associations]
symbol:BA_5159 "pyridine nucleotide-disulphide
oxidoreductase" species:198094 "Bacillus anthracis str. Ames"
[GO:0008150 "biological_process" evidence=ND] [GO:0015036
"disulfide oxidoreductase activity" evidence=ISS]
InterPro:IPR001327 InterPro:IPR013027 InterPro:IPR023753
Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368 GO:GO:0050660
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0016491
HOGENOM:HOG000067325 RefSeq:NP_847345.1 RefSeq:YP_021813.2
RefSeq:YP_031039.1 ProteinModelPortal:Q81XS1 DNASU:1084541
EnsemblBacteria:EBBACT00000011972 EnsemblBacteria:EBBACT00000015824
EnsemblBacteria:EBBACT00000023764 GeneID:1084541 GeneID:2819361
GeneID:2848272 KEGG:ban:BA_5159 KEGG:bar:GBAA_5159 KEGG:bat:BAS4796
OMA:VPELCKQ ProtClustDB:CLSK873604
BioCyc:BANT260799:GJAJ-4874-MONOMER
BioCyc:BANT261594:GJ7F-5036-MONOMER Uniprot:Q81XS1
Length = 403
Score = 123 (48.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 33/123 (26%), Positives = 60/123 (48%)
Query: 329 GLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNA-RGQAETDETLCVKGHPRIFA 387
G ++++ +++ V+W G + N + + A RG+ + DE + G+ +F
Sbjct: 245 GDDTELIKSETVVWAAGVRG--------NGIVEESGFEAMRGRVKVDEYMHAPGYEDVFM 296
Query: 388 LGDSSAL-RDSSGRPLPATAQVAFQQADFAGWNLWAAINDR-PLLPFRFQNLGEMMILGR 445
+GD++ + + RP P TAQ+A QQ NL + + + F F N G + LG
Sbjct: 297 VGDAALIINEEINRPYPPTAQIAIQQGYNIAHNLTVLVRGKGEMKKFVFDNKGSVCSLGH 356
Query: 446 NDA 448
+DA
Sbjct: 357 DDA 359
Score = 116 (45.9 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 36/144 (25%), Positives = 69/144 (47%)
Query: 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAW 137
K P+I +LG G+GG+ T +RL+ + ++ ++ LV+ + L+E +G +
Sbjct: 3 KTPKIVVLGAGYGGMITTVRLQKALSVNEA--EITLVNNNSYHYQATWLHESAAGTLQDE 60
Query: 138 EIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVL 197
+I D++ V F +D V + ++ ++L+ G + EYD+LV+
Sbjct: 61 KICLDIQDVIDTNKVNFVQDTVVEIKAAEK-------------RIILKDGEL-EYDYLVI 106
Query: 198 SLGAEPKLDVVPGAAEFAFPFSTL 221
LG E + + G E AF + +
Sbjct: 107 GLGFESETFGITGLKEHAFSIANI 130
>UNIPROTKB|P00393 [details] [associations]
symbol:ndh species:83333 "Escherichia coli K-12"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA;IDA] [GO:0019646 "aerobic
electron transport chain" evidence=IDA] [GO:0044459 "plasma
membrane part" evidence=IPI] [GO:0008137 "NADH dehydrogenase
(ubiquinone) activity" evidence=IDA] [GO:0009060 "aerobic
respiration" evidence=IMP] InterPro:IPR001327 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368
GO:GO:0050660 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0019646 GO:GO:0008137 eggNOG:COG1252
GO:GO:0044459 EMBL:V00306 PIR:A00461 RefSeq:NP_415627.1
RefSeq:YP_489377.1 PDB:1OZK PDBsum:1OZK ProteinModelPortal:P00393
SMR:P00393 DIP:DIP-10325N IntAct:P00393 PeroxiBase:5949
PRIDE:P00393 EnsemblBacteria:EBESCT00000002548
EnsemblBacteria:EBESCT00000014552 GeneID:12931088 GeneID:946792
KEGG:ecj:Y75_p1079 KEGG:eco:b1109 PATRIC:32117461 EchoBASE:EB0643
EcoGene:EG10649 HOGENOM:HOG000157010 KO:K03885 OMA:LGSASND
ProtClustDB:CLSK874586 BioCyc:EcoCyc:NADH-DHII-MONOMER
BioCyc:ECOL316407:JW1095-MONOMER BioCyc:MetaCyc:NADH-DHII-MONOMER
Genevestigator:P00393 Uniprot:P00393
Length = 434
Score = 175 (66.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 91/378 (24%), Positives = 150/378 (39%)
Query: 73 TWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSG 132
T P KK I I+GGG GGL A +L + + KK ++ LVD++ ++KP+L+E+ +G
Sbjct: 2 TTPLKK---IVIVGGGAGGLEMATQLGHKLGRK-KKAKITLVDRNHSHLWKPLLHEVATG 57
Query: 133 EVDAWEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEY 192
+D A + N G QF V + + + G +L+ I Y
Sbjct: 58 SLDEGVDALSYLAHARNHGFQFQLGSV-IDIDREAKTITIAELRDEKGELLVPERKIA-Y 115
Query: 193 DWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKXXXXXXXXXXXXXXKGIVQAIN 252
D LV++LG+ PG E A R ++ G V
Sbjct: 116 DTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANLGANGKVNIAI 175
Query: 253 VETTICPTGTPGNREAALKVLSARKVQLVLGYFVRC-IRRVGEFEASVKQPESGAIPNIA 311
V A+K L + + + + + GE P A +
Sbjct: 176 VGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNE 235
Query: 312 ADKNSDKYILE--LQPAIKG----LESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPL 365
K + + + + A +G + + EADL++W G K P + L
Sbjct: 236 LTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGIKA--PDFLKD---IGGLET 290
Query: 366 NARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 425
N Q + TL P I+A+GD ++ G +P AQ A Q A A N+ A +N
Sbjct: 291 NRINQLVVEPTLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAAHQMATCAMNNILAQMN 350
Query: 426 DRPLLPFRFQNLGEMMIL 443
+PL +++++ G ++ L
Sbjct: 351 GKPLKNYQYKDHGSLVSL 368
>TAIR|locus:2045708 [details] [associations]
symbol:NDA2 "AT2G29990" species:3702 "Arabidopsis
thaliana" [GO:0003954 "NADH dehydrogenase activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0031304 "intrinsic
to mitochondrial inner membrane" evidence=IDA] [GO:0005777
"peroxisome" evidence=IDA] InterPro:IPR001327 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0050660
GO:GO:0016491 EMBL:AC004680 eggNOG:COG1252 GO:GO:0031304 KO:K03885
HOGENOM:HOG000182501 ProtClustDB:CLSN2683844 IPI:IPI00537206
PIR:T02486 RefSeq:NP_180560.1 UniGene:At.38412
ProteinModelPortal:O80874 SMR:O80874 STRING:O80874 PaxDb:O80874
PRIDE:O80874 EnsemblPlants:AT2G29990.1 GeneID:817549
KEGG:ath:AT2G29990 GeneFarm:1787 TAIR:At2g29990 InParanoid:O80874
OMA:TIDCETV PhylomeDB:O80874 ArrayExpress:O80874
Genevestigator:O80874 Uniprot:O80874
Length = 508
Score = 145 (56.1 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 62/214 (28%), Positives = 100/214 (46%)
Query: 298 SVKQ-PESGA--IPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVE 354
++KQ +SG + I D S K IL+ G E L++W+ G P P V
Sbjct: 299 AIKQLNKSGVRFVRGIVKDVQSQKLILD-----DGTEVPY---GLLVWSTGVGPS-PFV- 348
Query: 355 PPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRP-LPATAQVAFQQA 413
R LP + G+ DE + V +FA+GD S +++G+P LPA AQVA ++
Sbjct: 349 ----RSLGLPKDPTGRIGIDEWMRVPSVQDVFAIGDCSGYLETTGKPTLPALAQVAEREG 404
Query: 414 DFAGWNLWAAIND---------RPL---LPFRFQNLGEMMILGRNDAAVS---PSFVEGV 458
+ NL AI + + +PF +++LG M +GR A V +G+
Sbjct: 405 KYLA-NLLNAIGKGNGGRANSAKEIELGVPFVYKHLGSMATIGRYKALVDLRESKDAKGI 463
Query: 459 TLDGPIGHSARKLAYLIRLPTDEHRLKVGVSWLT 492
++ G + + AYL R+ + +R V ++W T
Sbjct: 464 SMTGFVSWFIWRSAYLTRVISWRNRFYVAINWFT 497
Score = 76 (31.8 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 42/157 (26%), Positives = 61/157 (38%)
Query: 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAW 137
+KPR+ +LG G+ G RL + D V+ V VF P+L G ++
Sbjct: 70 EKPRVVVLGSGWAGC----RLMKGI--DTNLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 123
Query: 138 EIA-P--RFADLLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYD 193
+A P R ++ G FF L H V+ T G L + YD
Sbjct: 124 SVAEPISRIQPAISREPGSFFFLANCSRLDADAH-EVHCE-TLTDGLNTLKPWKFKIAYD 181
Query: 194 WLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRK 230
LV++ GAE + G E A + A + RK
Sbjct: 182 KLVIASGAEASTFGIHGVMENAIFLREVHHAQEIRRK 218
>ASPGD|ASPL0000028441 [details] [associations]
symbol:ndiA species:162425 "Emericella nidulans"
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001327
InterPro:IPR013027 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PRINTS:PR00368 GO:GO:0050660 GO:GO:0016491 EMBL:BN001305
HOGENOM:HOG000182501 ProteinModelPortal:C8VGX1
EnsemblFungi:CADANIAT00003790 OMA:VHSAPRI Uniprot:C8VGX1
Length = 516
Score = 113 (44.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 46/162 (28%), Positives = 68/162 (41%)
Query: 75 PDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEV 134
P K R+ ILG G+GG YT R S K+ ++V FVF P+L + G++
Sbjct: 31 PRDDKERVVILGSGWGG-YTMSRKLS-----PKRFAPVVVSPRSYFVFTPLLTDTAGGDL 84
Query: 135 DAWEIA-----PRF-ADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGL 188
D I P+ D + R +LC + V + TH
Sbjct: 85 DFSHIVEPVRDPKIRVDFIQAAARAIDLHRKTVLC--EPTIVKSGVTLTHTEEDEKSETF 142
Query: 189 IVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRK 230
+ YD LV+S+GA + PG + A F + D+ RV R+
Sbjct: 143 EIPYDKLVISVGAISRTFKTPGVKDNAIFFKDIGDSRRVRRR 184
Score = 105 (42.0 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 37/114 (32%), Positives = 57/114 (50%)
Query: 385 IFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLL---PFRFQNLGEMM 441
+FA+GD++ L +S P PATAQV Q+A W L +N R L PF F+N+G +
Sbjct: 398 VFAIGDNAMLEGAS--P-PATAQVTAQEAK---W-LATHLNQRDLQSSPPFSFRNMGTLA 450
Query: 442 ILGRNDAAVS-PSFVEGVTLDGPIGHSARKL---AYLIRLPTDEHRLKVGVSWL 491
+G A + P+ G G +A + AYL + ++L+V W+
Sbjct: 451 YIGNEKALMQLPNEERGYLPQKLTGRTAWLVWNSAYLTMTISWRNKLRVAFRWM 504
>TAIR|locus:2007427 [details] [associations]
symbol:NDA1 "AT1G07180" species:3702 "Arabidopsis
thaliana" [GO:0003954 "NADH dehydrogenase activity"
evidence=ISS;IMP] [GO:0005739 "mitochondrion" evidence=ISM;IDA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0071482
"cellular response to light stimulus" evidence=IEP] [GO:0031304
"intrinsic to mitochondrial inner membrane" evidence=IDA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0010264 "myo-inositol
hexakisphosphate biosynthetic process" evidence=RCA]
InterPro:IPR001327 InterPro:IPR013027 InterPro:IPR023753
Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368 EMBL:CP002684
GO:GO:0005777 GO:GO:0050660 eggNOG:COG1252 GO:GO:0003954
EMBL:AC067971 GO:GO:0031304 GO:GO:0071482 EMBL:AK118982
EMBL:BT005564 EMBL:AY084663 IPI:IPI00547671 PIR:H86206
RefSeq:NP_563783.1 UniGene:At.42309 ProteinModelPortal:Q8GWA1
SMR:Q8GWA1 STRING:Q8GWA1 PaxDb:Q8GWA1 PRIDE:Q8GWA1
EnsemblPlants:AT1G07180.1 GeneID:837229 KEGG:ath:AT1G07180
GeneFarm:1784 TAIR:At1g07180 HOGENOM:HOG000182501 InParanoid:Q8GWA1
OMA:CPPNAQH PhylomeDB:Q8GWA1 ProtClustDB:CLSN2683844
Genevestigator:Q8GWA1 Uniprot:Q8GWA1
Length = 510
Score = 127 (49.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 43/146 (29%), Positives = 71/146 (48%)
Query: 362 DLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRP-LPATAQVAFQQADF----- 415
D P + G+ DE + V +FA+GD S +S+G+ LPA AQVA ++ +
Sbjct: 354 DFPKDPGGRIGIDEWMRVPSVQDVFAIGDCSGYLESTGKSTLPALAQVAEREGKYLANLF 413
Query: 416 -----AGWNLWAAINDRPL-LPFRFQNLGEMMILGRNDAAVS---PSFVEGVTLDGPIGH 466
AG + + L PF +++LG M +GR A V +G+++ G +
Sbjct: 414 NVMGKAGGGRANSAKEMELGEPFVYKHLGSMATIGRYKALVDLRESKEGKGISMAGFLSW 473
Query: 467 SARKLAYLIRLPTDEHRLKVGVSWLT 492
+ AYL R+ + +R V ++WLT
Sbjct: 474 FIWRSAYLTRVVSWRNRFYVAINWLT 499
Score = 89 (36.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 39/157 (24%), Positives = 64/157 (40%)
Query: 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAW 137
+KPR+ +LG G+ G +++ ++ V+ V VF P+L G ++
Sbjct: 72 EKPRVLVLGSGWAGCRVLKGIDTSIYD------VVCVSPRNHMVFTPLLASTCVGTLEFR 125
Query: 138 EIA-P--RFADLLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYD 193
+A P R ++ G +F L +H V+ T G + L + YD
Sbjct: 126 SVAEPISRIQPAISREPGSYYFLANCSKLDADNH-EVHCETV-TEGSSTLKPWKFKIAYD 183
Query: 194 WLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRK 230
LVL+ GAE + G E A + A + RK
Sbjct: 184 KLVLACGAEASTFGINGVLENAIFLREVHHAQEIRRK 220
Score = 37 (18.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 108 KPQVLLVDQSERFVFKPMLY 127
KPQ L++D + P+++
Sbjct: 321 KPQKLILDDGTEVPYGPLVW 340
>UNIPROTKB|Q4K5W5 [details] [associations]
symbol:ndh "NADH dehydrogenase" species:220664 "Pseudomonas
protegens Pf-5" [GO:0003954 "NADH dehydrogenase activity"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=ISS] InterPro:IPR001327 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368
GO:GO:0050660 EMBL:CP000076 GenomeReviews:CP000076_GR
eggNOG:COG1252 GO:GO:0003954 HOGENOM:HOG000157010 KO:K03885
ProtClustDB:CLSK868725 RefSeq:YP_262368.1 ProteinModelPortal:Q4K5W5
STRING:Q4K5W5 PeroxiBase:5948 GeneID:3479692 KEGG:pfl:PFL_5296
PATRIC:19880069 OMA:FSARINK BioCyc:PFLU220664:GIX8-5337-MONOMER
Uniprot:Q4K5W5
Length = 432
Score = 105 (42.0 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 41/148 (27%), Positives = 71/148 (47%)
Query: 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIA 140
RI I+GGG GGL A RL + + V+LVD + ++KP+L+E+ +G +++ E
Sbjct: 4 RIVIVGGGAGGLELATRLGKTLGKRGTA-SVMLVDANLTHIWKPLLHEVAAGSLNSSEDE 62
Query: 141 PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHG--GTVLLESGLIVEYDWLVLS 198
+ +A F+ ++ + D +A T+ G LL + + YD LV++
Sbjct: 63 LNY---VAQAKWNHFEFQLGRMSGLDRQRKKIQLAATYDEEGVELLPAREL-GYDTLVIA 118
Query: 199 LGAEPKLDVVPGAAEFAFPFSTLEDACR 226
+G+ GAA+ T + A R
Sbjct: 119 VGSTTNDFGTQGAAQHCLFLDTRKQAER 146
Score = 96 (38.9 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 38/138 (27%), Positives = 60/138 (43%)
Query: 331 ESQIFEADLVLWTVGSK-P-LLPHVEP-PNNRLHDLPLNARGQAETDETLCVKGHPRIFA 387
+ Q A L +W G + P L ++ NR++ L + Q DE IFA
Sbjct: 259 DGQTIPASLKVWAAGIRAPGFLKDIDGLETNRINQLQVLPTLQTTRDEN--------IFA 310
Query: 388 LGDSSAL-RDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRN 446
GD +A + S R +P AQ A QQA +L I + L +++ + G ++ L R
Sbjct: 311 FGDCAACPQPGSDRNVPPRAQAAHQQASLLAKSLKLRIEGKDLPTYKYTDYGSLISLSRF 370
Query: 447 DAA--VSPSFVEGVTLDG 462
A + + V L+G
Sbjct: 371 SAVGNLMGNLTGSVMLEG 388
>DICTYBASE|DDB_G0295661 [details] [associations]
symbol:DDB_G0295661 "pyridine nucleotide-disulphide
oxidoreductase, NAD-binding region domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001327 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368
dictyBase:DDB_G0295661 GO:GO:0050660 GO:GO:0016491
EMBL:AAFI02000006 eggNOG:COG1252 EMBL:AAFI02000169 KO:K03885
RefSeq:XP_001733038.1 RefSeq:XP_645570.1 ProteinModelPortal:Q86AE2
STRING:Q86AE2 PRIDE:Q86AE2 EnsemblProtists:DDB0237656
EnsemblProtists:DDB0266339 GeneID:8618023 GeneID:8627808
KEGG:ddi:DDB_G0271532 KEGG:ddi:DDB_G0295661 dictyBase:DDB_G0271532
OMA:INDTRNI ProtClustDB:CLSZ2497277 Uniprot:Q86AE2
Length = 584
Score = 99 (39.9 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 47/204 (23%), Positives = 87/204 (42%)
Query: 40 RKNRFISFAASNSSGRNG----DLVVTSEDESASQTYTW--PD---KKKPRICILGGGFG 90
+ N+F + +G G D+VV + +S + + P+ KK+P++ ILG G+G
Sbjct: 64 KMNKFAFWGGLAVAGLGGFWIIDMVVNDDFDSVTDKFRTRLPESERKKRPKVVILGTGWG 123
Query: 91 GLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIA-P--RFADLL 147
L +L + ++ V ++ F+F P+L +G V+ I P ++
Sbjct: 124 SLCFLRKLHTDLFD------VTIISPRNYFLFTPLLVGGTTGTVEVRSIMEPIRKYCKRA 177
Query: 148 ANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLE-SGLIVEYDWLVLSLGAEPKLD 206
F++ + P V+ + C V E S +EYD L++ +GA+ +
Sbjct: 178 DAEDATFYEAECLSVDP-----VSKKVKCYDNSAVKGEVSEFELEYDHLIVGVGADNQTF 232
Query: 207 VVPGAAEFAFPFSTLEDACRVDRK 230
+PG E A + D + K
Sbjct: 233 GIPGVKENACFLKEINDTRNIRDK 256
Score = 83 (34.3 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 26/87 (29%), Positives = 41/87 (47%)
Query: 331 ESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGD 390
E I L++W G+ P + + ++ N RG D+ V G I+++GD
Sbjct: 372 EESIHPYGLLVWATGNTPRKITTQIMQSIGPNIQNNRRGLV-VDDYFRVAGTDGIWSIGD 430
Query: 391 SSALRDSSGRPLPATAQVAFQQADFAG 417
+S + +PL TAQVA QQ + G
Sbjct: 431 ASI---NPSKPLAQTAQVASQQGRYLG 454
Score = 63 (27.2 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 423 AINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTL-DGPIGHSARKLAYLIRLPTDE 481
A+ ++PL F+++++G + +G + A T+ +G I + + Y +L +
Sbjct: 505 AVKEKPL--FKYKHMGTLAYVGDHQAVAEFKGDHSTTVSEGYITYYLWRSVYFTKLLSVR 562
Query: 482 HRLKVGVSWLTKSAI 496
+R V WL KS++
Sbjct: 563 NRALVSFDWL-KSSV 576
Score = 41 (19.5 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 320 ILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVE 354
+L+ P K + + EA + T+ K ++ HVE
Sbjct: 304 LLKTYPLAKRINVTLVEALPHILTIFDKKIIDHVE 338
>UNIPROTKB|Q9KQV8 [details] [associations]
symbol:VC1890 "NADH dehydrogenase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003954 "NADH
dehydrogenase activity" evidence=ISS] InterPro:IPR001327
InterPro:IPR013027 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PRINTS:PR00368 GO:GO:0050660 GenomeReviews:AE003852_GR
GO:GO:0003954 KO:K03885 OMA:LGSASND ProtClustDB:CLSK874586
EMBL:AE004264 PIR:A82145 RefSeq:NP_231524.1
ProteinModelPortal:Q9KQV8 DNASU:2613519 GeneID:2613519
KEGG:vch:VC1890 PATRIC:20082822 Uniprot:Q9KQV8
Length = 434
Score = 110 (43.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 38/146 (26%), Positives = 64/146 (43%)
Query: 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIA 140
RI ++GGG GGL +L + + + V LVD++ ++KP+L+E+ +G +D A
Sbjct: 8 RIIVVGGGAGGLELVTKLGRTLGRKGRA-NVTLVDRNSSHLWKPLLHEVATGSLDEGVDA 66
Query: 141 PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG 200
+ N F + + + HG ++ + L EYD LVL++G
Sbjct: 67 LSYRAHAKNHSFDFQLGSLASIDRESKTITLSELKDEHGELLMPKRDL--EYDILVLAIG 124
Query: 201 AEPKLDVVPGAAEFAFPFSTLEDACR 226
+ PG E + E A R
Sbjct: 125 STSNDFNTPGVKEHCIFLDSPEQANR 150
Score = 85 (35.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 29/118 (24%), Positives = 53/118 (44%)
Query: 331 ESQIFEADLVLWTVGSK-P-LLPHVEP-PNNRLHDLPLNARGQAETDETLCVKGHPRIFA 387
+ + A +++W G K P + + NR++ L + Q D+ IF
Sbjct: 261 DGEKISAHIMVWAAGIKAPDFMKDIAGLETNRINQLVVKGTLQTTRDDD--------IFV 312
Query: 388 LGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGR 445
+GD + + G+ +P AQ A Q A A N+ A + R L + +++ G ++ L R
Sbjct: 313 IGDLAQCTQADGKFVPPRAQAAHQMASLAFRNIVAKMYGRELKAYVYKDHGSLVSLSR 370
>TIGR_CMR|VC_1890 [details] [associations]
symbol:VC_1890 "NADH dehydrogenase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003954 "NADH dehydrogenase
activity" evidence=ISS] InterPro:IPR001327 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368
GO:GO:0050660 GenomeReviews:AE003852_GR GO:GO:0003954 KO:K03885
OMA:LGSASND ProtClustDB:CLSK874586 EMBL:AE004264 PIR:A82145
RefSeq:NP_231524.1 ProteinModelPortal:Q9KQV8 DNASU:2613519
GeneID:2613519 KEGG:vch:VC1890 PATRIC:20082822 Uniprot:Q9KQV8
Length = 434
Score = 110 (43.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 38/146 (26%), Positives = 64/146 (43%)
Query: 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIA 140
RI ++GGG GGL +L + + + V LVD++ ++KP+L+E+ +G +D A
Sbjct: 8 RIIVVGGGAGGLELVTKLGRTLGRKGRA-NVTLVDRNSSHLWKPLLHEVATGSLDEGVDA 66
Query: 141 PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG 200
+ N F + + + HG ++ + L EYD LVL++G
Sbjct: 67 LSYRAHAKNHSFDFQLGSLASIDRESKTITLSELKDEHGELLMPKRDL--EYDILVLAIG 124
Query: 201 AEPKLDVVPGAAEFAFPFSTLEDACR 226
+ PG E + E A R
Sbjct: 125 STSNDFNTPGVKEHCIFLDSPEQANR 150
Score = 85 (35.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 29/118 (24%), Positives = 53/118 (44%)
Query: 331 ESQIFEADLVLWTVGSK-P-LLPHVEP-PNNRLHDLPLNARGQAETDETLCVKGHPRIFA 387
+ + A +++W G K P + + NR++ L + Q D+ IF
Sbjct: 261 DGEKISAHIMVWAAGIKAPDFMKDIAGLETNRINQLVVKGTLQTTRDDD--------IFV 312
Query: 388 LGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGR 445
+GD + + G+ +P AQ A Q A A N+ A + R L + +++ G ++ L R
Sbjct: 313 IGDLAQCTQADGKFVPPRAQAAHQMASLAFRNIVAKMYGRELKAYVYKDHGSLVSLSR 370
>UNIPROTKB|Q48ND0 [details] [associations]
symbol:ndh "NADH dehydrogenase" species:264730 "Pseudomonas
syringae pv. phaseolicola 1448A" [GO:0003954 "NADH dehydrogenase
activity" evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=ISS] InterPro:IPR001327 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368
GO:GO:0050660 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG1252 GO:GO:0003954 HOGENOM:HOG000157010 KO:K03885
RefSeq:YP_273091.1 ProteinModelPortal:Q48ND0 STRING:Q48ND0
GeneID:3560012 KEGG:psp:PSPPH_0809 PATRIC:19970689 OMA:DPDIFAF
ProtClustDB:CLSK868725 Uniprot:Q48ND0
Length = 432
Score = 145 (56.1 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 95/398 (23%), Positives = 154/398 (38%)
Query: 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIA 140
RI I+GGG GGL A L + + V LVD + ++KP+L+E+ +G ++++E
Sbjct: 4 RIVIVGGGAGGLELATSLGKTLGKKGTA-SVTLVDANLTHIWKPLLHEVAAGSLNSYEDE 62
Query: 141 PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG 200
+ QF R+ L + ++ G L+ + + YD LV+++G
Sbjct: 63 LNYVAQAKWNNFQFQLGRMTGLDRASRQ-IHLAETLDENGAELVPARSL-GYDSLVIAVG 120
Query: 201 AEPKLDVVPGAAEFAFPFSTLEDACRVDRKXXXXXXXXXXXXXXKGIVQAINVETTICPT 260
+ GAAE + + A R ++ Q I V I
Sbjct: 121 STTNDFGTTGAAEHCLFLDSRKQAERFHQQLLNHYLRAHAGQADSA--QEITV--AIVGA 176
Query: 261 GTPGNREAALKVLSARKVQLV-LGYFVRCIRRVGEFEASVKQ----PES-GAIPNIAADK 314
G G AA +A ++ LG R+ EA + PE GA + +K
Sbjct: 177 GATGVELAAELHNAAHELAAYGLGQIKPENLRITVIEAGPRVLPALPERIGAPVHKTLEK 236
Query: 315 NSDKYILEL---QPAIKGL---ESQIFEADLVLWTVGSK-PLLPHVEPPNNRLHDLPLNA 367
+ + GL Q+ A L +W G + P H L L N
Sbjct: 237 LGVTVLTNAAVSEVTADGLITASGQVIPASLKVWAAGIRAPAFLH------ELDGLESNR 290
Query: 368 RGQAETDETLCVKGHPRIFALGDSSAL-RDSSGRPLPATAQVAFQQADFAGWNLWAAIND 426
Q + TL IFA GD +A + + R +P AQ A QQA +L I
Sbjct: 291 INQLQVLPTLQTTRDENIFAFGDCAACPQKGTDRNVPPRAQAAHQQASLLAKSLRLRIEG 350
Query: 427 RPLLPFRFQNLGEMMILGRNDAA--VSPSFVEGVTLDG 462
+ L + +++ G ++ L A + + + V L+G
Sbjct: 351 KTLPEYTYKDYGSLISLSSFSAVGNLMGNLMGSVMLEG 388
>UNIPROTKB|P95160 [details] [associations]
symbol:ndh "PROBABLE NADH DEHYDROGENASE NDH" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0003955 "NAD(P)H
dehydrogenase (quinone) activity" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0019646 "aerobic electron transport chain"
evidence=IDA] InterPro:IPR001327 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368
GO:GO:0005887 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0050660 GO:GO:0016491 EMBL:BX842578 GO:GO:0019646
GO:GO:0003954 GO:GO:0003955 KO:K03885 EMBL:CP003248 PIR:F70665
RefSeq:NP_216370.1 RefSeq:NP_336359.1 RefSeq:YP_006515254.1
SMR:P95160 EnsemblBacteria:EBMYCT00000002002
EnsemblBacteria:EBMYCT00000072954 GeneID:13316645 GeneID:885746
GeneID:923704 KEGG:mtc:MT1902 KEGG:mtu:Rv1854c KEGG:mtv:RVBD_1854c
PATRIC:18125945 TubercuList:Rv1854c HOGENOM:HOG000241051
OMA:SAVVKMG ProtClustDB:CLSK791434 Uniprot:P95160
Length = 463
Score = 107 (42.7 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 45/160 (28%), Positives = 75/160 (46%)
Query: 67 SASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPML 126
S Q T ++ R+ I+G GFGGL A +L+ + D + L+ ++ +F+P+L
Sbjct: 2 SPQQEPTAQPPRRHRVVIIGSGFGGLNAAKKLK----RADV--DIKLIARTTHHLFQPLL 55
Query: 127 YELLSGEVDAWEIAPRFADLLANTGVQFFKDR-VKLLCPS-DHLGVNGPMACTHGGTVLL 184
Y++ +G + EIAP T V K R V++L + H+ + G + LL
Sbjct: 56 YQVATGIISEGEIAPP-------TRVVLRKQRNVQVLLGNVTHIDLAGQCVVSE----LL 104
Query: 185 ESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDA 224
YD L+++ GA AEFA +++DA
Sbjct: 105 GHTYQTPYDSLIVAAGAGQSYFGNDHFAEFAPGMKSIDDA 144
Score = 83 (34.3 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 33/129 (25%), Positives = 54/129 (41%)
Query: 365 LNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAI 424
L+ G+ + L + G+P +F +GD +A+ +P AQ A Q A + + A +
Sbjct: 297 LDRAGRVQVLPDLSIPGYPNVFVVGDMAAVEG-----VPGVAQGAIQGAKYVASTIKAEL 351
Query: 425 ---NDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLDGPIGHSARKLAYLIRLPTDE 481
N PF++ + G M + R A VE + LAYLI T
Sbjct: 352 AGANPAEREPFQYFDKGSMATVSRFSAVAKIGPVEFSGFIAWLIWLVLHLAYLIGFKT-- 409
Query: 482 HRLKVGVSW 490
++ +SW
Sbjct: 410 -KITTLLSW 417
>UNIPROTKB|P95200 [details] [associations]
symbol:ndhA "NADH dehydrogenase" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0003955 "NAD(P)H
dehydrogenase (quinone) activity" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0044119 "growth of symbiont in host cell" evidence=IMP]
InterPro:IPR001327 InterPro:IPR013027 InterPro:IPR023753
Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368 GO:GO:0005829
GO:GO:0005886 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0050660 GO:GO:0016491 GO:GO:0044119 EMBL:BX842573
GO:GO:0003954 GO:GO:0003955 KO:K03885 EMBL:CP003248
HOGENOM:HOG000241051 PIR:G70632 RefSeq:NP_214906.1
RefSeq:NP_334811.1 RefSeq:YP_006513717.1 SMR:P95200
EnsemblBacteria:EBMYCT00000000894 EnsemblBacteria:EBMYCT00000069724
GeneID:13318258 GeneID:886430 GeneID:923640 KEGG:mtc:MT0403
KEGG:mtu:Rv0392c KEGG:mtv:RVBD_0392c PATRIC:18122602
TubercuList:Rv0392c OMA:GHDDAIG ProtClustDB:CLSK790487
Uniprot:P95200
Length = 470
Score = 96 (38.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 39/146 (26%), Positives = 70/146 (47%)
Query: 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIA 140
R+ I+G GFGGL A L+ + D + L+ ++ +F+P+LY++ +G + +IA
Sbjct: 16 RVVIIGSGFGGLNAAKALK----RADV--DITLISKTTTHLFQPLLYQVATGILSEGDIA 69
Query: 141 PRFADLLANTGVQFFKDRVKLLCPSDHLG-VNG-PMACTHGGTVLLESGLIVEYDWLVLS 198
P +L + V++L LG VN + + L++ + YD L+++
Sbjct: 70 PTTRLILRR------QKNVRVL-----LGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVA 118
Query: 199 LGAEPKLDVVPGAAEFAFPFSTLEDA 224
GA+ A FA T++DA
Sbjct: 119 AGAQQSYFGNDEFATFAPGMKTIDDA 144
Score = 93 (37.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 36/130 (27%), Positives = 56/130 (43%)
Query: 365 LNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAI 424
++ G+ + L VKGHP +F +GD L G +P AQ A Q A +A + +
Sbjct: 298 IDRAGRVIVEPDLTVKGHPNVFVVGD---LMFVPG--VPGVAQGAIQGARYATTVIKHMV 352
Query: 425 --NDRPL--LPFRFQNLGEMMILGRNDAAVSPSFVEGVTLDGPIGHSARKLAYLIRLPTD 480
ND P PF + N G M + R+ A +E G A + +L+ L
Sbjct: 353 KGNDDPANRKPFHYFNKGSMATISRHSAVAQVGKLE---FAGYFAWLAWLVLHLVYLVGY 409
Query: 481 EHRLKVGVSW 490
+R+ +W
Sbjct: 410 RNRIAALFAW 419
>TAIR|locus:2051431 [details] [associations]
symbol:NDB4 "AT2G20800" species:3702 "Arabidopsis
thaliana" [GO:0003954 "NADH dehydrogenase activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0031314 "extrinsic
to mitochondrial inner membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000103 InterPro:IPR001327
InterPro:IPR002048 InterPro:IPR011992 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368
PRINTS:PR00469 PROSITE:PS50222 Prosite:PS00018 GO:GO:0009536
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0050660
GO:GO:0016491 GO:GO:0005509 Gene3D:1.10.238.10 eggNOG:COG1252
GO:GO:0031314 EMBL:AC006234 KO:K03885 HOGENOM:HOG000182501
ProtClustDB:CLSN2683336 EMBL:DQ446535 IPI:IPI00535790 PIR:E84593
RefSeq:NP_179673.1 UniGene:At.51205 ProteinModelPortal:Q9SKT7
SMR:Q9SKT7 STRING:Q9SKT7 PaxDb:Q9SKT7 PRIDE:Q9SKT7
EnsemblPlants:AT2G20800.1 GeneID:816609 KEGG:ath:AT2G20800
GeneFarm:1795 TAIR:At2g20800 InParanoid:Q9SKT7 OMA:FQMDAAN
PhylomeDB:Q9SKT7 Genevestigator:Q9SKT7 Uniprot:Q9SKT7
Length = 582
Score = 118 (46.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 39/154 (25%), Positives = 72/154 (46%)
Query: 75 PDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEV 134
P +KK ++ +LG G+ G Y+ L + ++ V +V F+F P+L + +G V
Sbjct: 60 PIRKK-KVVVLGSGWSG-YSFLS-----YLNNPNYDVQVVSPRNFFLFTPLLPSVTNGTV 112
Query: 135 DAWEIAPRFADLLANTGVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYD 193
+A I L+ G ++ + + VK+ + + + GT + ++YD
Sbjct: 113 EARSIVEPIRGLMRKKGFEYKEAECVKIDASNKKIHCRSKEGSSLKGTTEFD----MDYD 168
Query: 194 WLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRV 227
L+L++GA+P PG E A+ EDA +
Sbjct: 169 ILILAVGAKPNTFNTPGVEEHAYFLKEAEDALNI 202
Score = 72 (30.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 34/113 (30%), Positives = 50/113 (44%)
Query: 396 DSSGRPLPATAQVAFQQADFAG--WNLWAAINDRPLLPFRFQNLGEMMILG---RNDAAV 450
DS + LPATAQVA QQ + +N +P P RF+ G R+ +
Sbjct: 462 DSQMKNLPATAQVASQQGKYLAKCFNKMEKCEKKPEGPLRFRGEGRHRFQPFRYRHFGSF 521
Query: 451 SPSFVEGVTLDGP-----IGHSARKLAYLIRLPTDEHRLKVGVSWLTKSAIDS 498
+P E + P IGHS++ L Y + + K+ VSW T+ + S
Sbjct: 522 APLGGEQTAAELPGDWVSIGHSSQWLWYSV------YASKL-VSWRTRMLVIS 567
Score = 63 (27.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 339 LVLWT--VGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRD 396
+V+W+ +GS+P++ + + + R TDE L V+G ++ALGD++ +
Sbjct: 329 MVVWSTGIGSRPVI------KDFMQQIGQGQRRVLATDEWLRVEGCDGVYALGDTATINQ 382
Query: 397 SSGRPLPATAQVAFQQAD 414
R + A + F +AD
Sbjct: 383 R--RVMEDIAAI-FNKAD 397
>SGD|S000004589 [details] [associations]
symbol:NDI1 "NADH:ubiquinone oxidoreductase" species:4932
"Saccharomyces cerevisiae" [GO:0006116 "NADH oxidation"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0001300 "chronological cell aging" evidence=IMP] [GO:0005759
"mitochondrial matrix" evidence=IMP;IDA] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=IDA] [GO:0006120
"mitochondrial electron transport, NADH to ubiquinone"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001327
InterPro:IPR013027 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PRINTS:PR00368 SGD:S000004589 GO:GO:0005743 GO:GO:0050660
GO:GO:0005759 GO:GO:0001300 EMBL:BK006946 GO:GO:0043065
GO:GO:0008137 GO:GO:0006120 GO:GO:0006116 eggNOG:COG1252 KO:K03885
EMBL:Z49218 HOGENOM:HOG000182501 GeneTree:ENSGT00530000065152
EMBL:X61590 EMBL:AY723851 PIR:S26704 RefSeq:NP_013586.1 PDB:4G6G
PDB:4G6H PDB:4G73 PDB:4G74 PDB:4G9K PDB:4GAP PDB:4GAV PDBsum:4G6G
PDBsum:4G6H PDBsum:4G73 PDBsum:4G74 PDBsum:4G9K PDBsum:4GAP
PDBsum:4GAV ProteinModelPortal:P32340 SMR:P32340 DIP:DIP-5554N
IntAct:P32340 MINT:MINT-556740 STRING:P32340 UCD-2DPAGE:P32340
PaxDb:P32340 PeptideAtlas:P32340 EnsemblFungi:YML120C GeneID:854919
KEGG:sce:YML120C CYGD:YML120c OMA:EPRQIEY OrthoDB:EOG4TQQJG
NextBio:977929 Genevestigator:P32340 GermOnline:YML120C
Uniprot:P32340
Length = 513
Score = 100 (40.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 46/199 (23%), Positives = 80/199 (40%)
Query: 42 NRFISFAASNSSG-RNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLES 100
N + FA++ S+G N TS + KP + ILG G+G + +
Sbjct: 17 NTLVRFASTRSTGVENSGAGPTSF--KTMKVIDPQHSDKPNVLILGSGWGAISFLKHI-- 72
Query: 101 LVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADL-LANTG-VQFFKDR 158
D KK V ++ F+F P+L G VD I + L G V +++
Sbjct: 73 ----DTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAE 128
Query: 159 VKLLCPSDH-LGVNGPMACT-------HGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPG 210
+ P + + + A + H G E I +YD+L+ ++GAEP +PG
Sbjct: 129 ATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEI-KYDYLISAVGAEPNTFGIPG 187
Query: 211 AAEFAFPFSTLEDACRVDR 229
++ + ++ + R
Sbjct: 188 VTDYGHFLKEIPNSLEIRR 206
Score = 88 (36.0 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 340 VLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSG 399
++W G+K P + ++ + + RG A D L VKG IFA+GD++ +G
Sbjct: 335 LIWATGNKAR-PVITDLFKKIPEQNSSKRGLAVND-FLQVKGSNNIFAIGDNAF----AG 388
Query: 400 RPLPATAQVAFQQADFAGWN 419
LP TAQVA Q+A++ N
Sbjct: 389 --LPPTAQVAHQEAEYLAKN 406
>POMBASE|SPAC3A11.07 [details] [associations]
symbol:SPAC3A11.07 "NADH dehydrogenase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003954 "NADH
dehydrogenase activity" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0006091 "generation of precursor metabolites and
energy" evidence=NAS] [GO:0006116 "NADH oxidation" evidence=ISS]
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001327 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368
PomBase:SPAC3A11.07 EMBL:CU329670 GO:GO:0005743 GO:GO:0050660
GO:GO:0006091 GO:GO:0008137 GO:GO:0006116 eggNOG:COG1252
GO:GO:0003954 KO:K03885 HOGENOM:HOG000182501 PIR:T11629
RefSeq:NP_594196.1 ProteinModelPortal:O14121 PRIDE:O14121
EnsemblFungi:SPAC3A11.07.1 GeneID:2543119 KEGG:spo:SPAC3A11.07
OMA:WMPELSK OrthoDB:EOG4VT95D NextBio:20804146 Uniprot:O14121
Length = 551
Score = 97 (39.2 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 75 PDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEV 134
PD K + +LG G+G T++ L ++ D V++V F+F +L +G V
Sbjct: 87 PDPSKKTLVVLGAGWGA--TSI-LRTI---DTSLFNVIVVSPRNYFLFTSLLPSTATGSV 140
Query: 135 DAWEIAPRFADLLANTG--VQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEY 192
I +L + V+F++ + +D ++ T G V LE ++Y
Sbjct: 141 HTRSIVQPIRYMLRHKSCYVKFYEAECTDV-DADKKVIHIKKTTTDG--VDLEQE--IKY 195
Query: 193 DWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRV 227
D+LV S GAE + +PG AE+ + DA ++
Sbjct: 196 DYLVCSHGAETQTFNIPGIAEYGCFLKEIWDAQKI 230
Score = 77 (32.2 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 31/103 (30%), Positives = 52/103 (50%)
Query: 331 ESQIFEADLVLWTVGSK--PLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFAL 388
+ ++ L++W G++ PL + + + N RG DE L +KG+ IFAL
Sbjct: 352 QEEVIPYGLLVWAGGNRARPLTKKLMEGSEEQN----NRRGLV-VDEYLKLKGYKDIFAL 406
Query: 389 GDSSALRDSSGRPLPATAQVAFQQADFAG--WNLWAAIN-DRP 428
GD + ++ P TAQVA QQ + G +N ++N ++P
Sbjct: 407 GDCT---HTAYAP---TAQVASQQGAYLGQLFNKLGSLNFEKP 443
Score = 54 (24.1 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 15/65 (23%), Positives = 28/65 (43%)
Query: 430 LPFRFQNLGEMMILGRNDAAVS---PSFVEGVTLDGPIGHSARKLAYLIRLPTDEHRLKV 486
LPF++ + G + +G A P F + + G + + YL L + +R V
Sbjct: 475 LPFKYSHQGSLAYVGHEKAIADIEVPWFGKQLHASGALAFYFWRSVYLSELYSLRNRTNV 534
Query: 487 GVSWL 491
+ W+
Sbjct: 535 TLDWI 539
>DICTYBASE|DDB_G0270104 [details] [associations]
symbol:DDB_G0270104 "putative NADH dehydrogenase"
species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] InterPro:IPR001327
InterPro:IPR013027 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PRINTS:PR00368 dictyBase:DDB_G0270104 EMBL:AAFI02000005
GO:GO:0050660 GO:GO:0016491 eggNOG:COG1252 KO:K03885
RefSeq:XP_646542.2 ProteinModelPortal:Q55CD9 STRING:Q55CD9
EnsemblProtists:DDB0238855 GeneID:8617508 KEGG:ddi:DDB_G0270104
OMA:RNMLANY ProtClustDB:PTZ00318 Uniprot:Q55CD9
Length = 451
Score = 128 (50.1 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 43/157 (27%), Positives = 73/157 (46%)
Query: 339 LVLWT--VGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRD 396
L++W+ +G PL+ + + HD + D+ L VK + +F+ GD + + +
Sbjct: 297 LLVWSTGIGQHPLVKNSSFEKDS-HDRII-------VDDHLRVKNYSNVFSFGDCANVEN 348
Query: 397 SSGRPLPATAQVAFQQADFAG--WNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSF 454
+ P TAQVA Q A + +N +N P PF F+ LG + G+ + F
Sbjct: 349 KN---YPPTAQVASQSAVYLAKEFNNLEKLNPNPPKPFAFKFLGLLAYTGKKSGILQTDF 405
Query: 455 VEGVTLDGPIGHSARKLAYLIRLPTDEHRLKVGVSWL 491
+ L G IG + AYL RL + +++V W+
Sbjct: 406 FD---LSGFIGFITWRSAYLTRLGSLRSKIQVPFDWM 439
Score = 51 (23.0 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 33/151 (21%), Positives = 61/151 (40%)
Query: 81 RICILGGGFGGLYTALR-LESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEI 139
++ ILG G+G Y+ L+ L S+ K + ++ F+F P+L G ++ I
Sbjct: 41 KLIILGCGWGS-YSFLKNLNSI------KYDITVISPRNHFLFTPLLTSSAVGTLEFRSI 93
Query: 140 APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSL 199
A ++ + V + P + N + + T E ++YD LV+ +
Sbjct: 94 AEPVRTTRDINEFKYIQASVTSINPEN----NSVLVKS---TFHNEKPFEMKYDKLVIGV 146
Query: 200 GAEPKLDVVPGAAEFAFPFSTLEDACRVDRK 230
G+ + G E A L A + +K
Sbjct: 147 GSRNNTFGIKGVEENANFLKELHHAREIRQK 177
>TAIR|locus:2119667 [details] [associations]
symbol:NDB3 "AT4G21490" species:3702 "Arabidopsis
thaliana" [GO:0003954 "NADH dehydrogenase activity" evidence=ISS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001327 InterPro:IPR002048
InterPro:IPR011992 InterPro:IPR013027 InterPro:IPR023753
Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368 PROSITE:PS50222
Prosite:PS00018 GO:GO:0005739 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005777 GO:GO:0005743 GO:GO:0050660
GO:GO:0016491 GO:GO:0005509 Gene3D:1.10.238.10 eggNOG:COG1252
EMBL:AL022603 EMBL:AL161555 KO:K03885 IPI:IPI00533841
IPI:IPI01020302 PIR:T05157 RefSeq:NP_193880.5 UniGene:At.32626
ProteinModelPortal:F4JJJ3 SMR:F4JJJ3 PRIDE:F4JJJ3
EnsemblPlants:AT4G21490.1 GeneID:828234 KEGG:ath:AT4G21490
GeneFarm:1794 TAIR:At4g21490 OMA:VNDKEIS Uniprot:F4JJJ3
Length = 580
Score = 100 (40.3 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 45/182 (24%), Positives = 78/182 (42%)
Query: 50 SNSSGRNGDLVVTSE-DESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKK 108
S SG G L+V SE + S S +K ++ +LG G+ G A L++L ++
Sbjct: 27 STISG--GGLIVYSEANPSYSNNGVETKTRKRKVVLLGTGWAG---ASFLKTL---NNSS 78
Query: 109 PQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQ--FFKDRVKLLCP-S 165
+V ++ F F P+L + G V+A + ++ V+ F + + P S
Sbjct: 79 YEVQVISPRNYFAFTPLLPSVTCGTVEARSVVEPIRNIARKQNVEMSFLEAECFKIDPGS 138
Query: 166 DHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDAC 225
+ G + V+YD+LV++ GA+ +PG E +EDA
Sbjct: 139 KKVYCRSKQGVNSKGKKEFD----VDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQ 194
Query: 226 RV 227
R+
Sbjct: 195 RI 196
Score = 65 (27.9 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 31/129 (24%), Positives = 56/129 (43%)
Query: 290 RRVGEFEASVKQPESGAIPNIAAD--KNSDKYILELQPAIKGLESQIFEADLVLWT--VG 345
+R+ EF A K G + + K +DK E+ K E +++W+ +G
Sbjct: 275 KRITEF-AEEKFTRDGIDVKLGSMVVKVNDK---EISAKTKAGEVSTIPYGMIVWSTGIG 330
Query: 346 SKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPAT 405
++P++ + + + R TDE L V+G I+ALGD + + R +
Sbjct: 331 TRPVI------KDFMKQIGQGNRRALATDEWLRVEGCDNIYALGDCATINQ---RKVMED 381
Query: 406 AQVAFQQAD 414
F++AD
Sbjct: 382 IAAIFKKAD 390
Score = 56 (24.8 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 27/95 (28%), Positives = 40/95 (42%)
Query: 396 DSSGRPLPATAQVAFQQADFAG--WNLWAAINDRP-------------LLPFRFQNLGEM 440
DS + LPAT QVA QQ + ++ P PFR+++LG+
Sbjct: 460 DSQVKLLPATGQVAAQQGTYLAKCFDRMEVCEKNPEGPIRIRGEGRHRFRPFRYRHLGQF 519
Query: 441 MILGRNDAAVSPSFVEGVTLDGPIGHSARKLAYLI 475
LG A + G + IGHS++ L Y +
Sbjct: 520 APLGGEQTAAQ---LPGDWVS--IGHSSQWLWYSV 549
>UNIPROTKB|O07220 [details] [associations]
symbol:MT1860 "NADH dehydrogenase-like protein
Rv1812c/MT1860" species:1773 "Mycobacterium tuberculosis"
[GO:0005576 "extracellular region" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000103
InterPro:IPR001327 InterPro:IPR013027 InterPro:IPR023753
Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368 PRINTS:PR00469
InterPro:IPR016040 GO:GO:0005886 GO:GO:0005576 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 GO:GO:0050660 GO:GO:0016491 EMBL:BX842577
eggNOG:COG1252 KO:K03885 PIR:F70982 RefSeq:NP_216328.1
RefSeq:NP_336319.1 RefSeq:YP_006515212.1 ProteinModelPortal:O07220
SMR:O07220 PRIDE:O07220 EnsemblBacteria:EBMYCT00000001140
EnsemblBacteria:EBMYCT00000070469 GeneID:13316603 GeneID:885487
GeneID:923775 KEGG:mtc:MT1860 KEGG:mtu:Rv1812c KEGG:mtv:RVBD_1812c
PATRIC:18125863 TubercuList:Rv1812c HOGENOM:HOG000241050
OMA:PMGRFAG ProtClustDB:CLSK867445 Uniprot:O07220
Length = 400
Score = 85 (35.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 42/153 (27%), Positives = 62/153 (40%)
Query: 81 RICILGGGFGGLYTAL----RLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
R+ ++G GF GL+ AL RL+ L V++V + YE ++ A
Sbjct: 3 RVVVIGSGFAGLWAALGAARRLDELAVLAGTV-DVMVVSNKPFHDIRVRNYE---ADLSA 58
Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196
I P D+L GV V + +D G V +G YD LV
Sbjct: 59 CRI-P-LGDVLGPAGVAHVTAEVTAI-DAD------------GRRVTTSTGASYSYDRLV 103
Query: 197 LSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDR 229
L+ G+ +PG AEF F T + A R+ +
Sbjct: 104 LASGSHVVKPALPGLAEFGFDVDTYDGAVRLQQ 136
Score = 78 (32.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 26/94 (27%), Positives = 40/94 (42%)
Query: 369 GQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 428
G+ + D+ L V G P +FA GD +A R + Q +AG N+ + D+P
Sbjct: 269 GRLQVDDYLRVIGVPAMFAAGDVAAARMDDEHLSVMSCQHGRPMGRYAGCNVINDLFDQP 328
Query: 429 LLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLDG 462
LL R ++ LG A + + V G
Sbjct: 329 LLALRIPWYVTVLDLGSAGAVYTEGWERKVVSQG 362
>UNIPROTKB|G4N3S3 [details] [associations]
symbol:MGG_04999 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001327 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368
EMBL:CM001233 GO:GO:0050660 GO:GO:0016491 KO:K03885
RefSeq:XP_003712503.1 ProteinModelPortal:G4N3S3
EnsemblFungi:MGG_04999T0 GeneID:2675683 KEGG:mgr:MGG_04999
Uniprot:G4N3S3
Length = 518
Score = 84 (34.6 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 44/169 (26%), Positives = 72/169 (42%)
Query: 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
K+K R+ ILG G+ G A L D K ++V FVF P+L G ++
Sbjct: 47 KRKERVVILGSGWAGYALARTL------DPAKFDRVVVSPRSHFVFTPLLASTAVGTLEF 100
Query: 137 WEIA-P--RFADLLANTG----VQFFKDRVKLLCPSD-----HLGVNGPMACTHGGTVLL 184
+A P R ++ G V F + V++ D H + P T G ++
Sbjct: 101 RAVAEPVRRIRQVIFQQGWADDVDFTRKVVRVEASIDDDAASHTTIPVPEPATIPGKAVI 160
Query: 185 ES----GLIVE--YDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRV 227
+ G +++ YD LV+++GA + + G E A + DA R+
Sbjct: 161 PTTPHKGPMIDVPYDKLVVAVGAYSQTFNIDGVREHAHFLRDVGDARRI 209
Score = 81 (33.6 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 59/254 (23%), Positives = 104/254 (40%)
Query: 246 GIVQAINVET-TICPTGTPG-NREAA---LKVLSARKVQLVLGYFVRCIRRVGEFEASVK 300
G+V + + I P P ++E A +++ + R +++ + ++ IR G+ +K
Sbjct: 267 GLVPLVRITVYDIAPAVLPMFDKELAGYAMELFNRRGIEIRTEHHLQAIRAEGD-GLKLK 325
Query: 301 QPESGAIPNIAADKNSDKYILELQPAIKGL-ESQIFEADLVLWTVGSKPLLPHVEPPNNR 359
E G + A L P +K L ++Q+ + GS P P + +
Sbjct: 326 IKEHGD-QEVGAGMVVWSTGLMQHPLVKKLVDNQVHDQ-------GSNPNSPLRLKSDPK 377
Query: 360 LHDLPLNARGQAETDETLCVKGHPR---IFALGDSSALRDSSGRPLPATAQVAFQQADFA 416
+ + +A+ E PR +F +GD + + + LP T QVA QQA +
Sbjct: 378 TGAIVTDGHMRAQITENASRGQSPRMDDVFVIGDCAFCE--ADQSLPKTGQVASQQAVYL 435
Query: 417 GWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLDGPIGHSARKLAYLIR 476
L + D PF F+N G M LG A+ S + L G + AYL +
Sbjct: 436 AKALNSGNLDESK-PFSFRNWGTMAYLG-GWRAIHQSSAD--ELKGRAAWVLWRTAYLTK 491
Query: 477 LPTDEHRLKVGVSW 490
+ +++ V W
Sbjct: 492 SLSVRNKIIVPFFW 505
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 513 487 0.00081 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 621 (66 KB)
Total size of DFA: 289 KB (2150 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.43u 0.10s 37.53t Elapsed: 00:00:17
Total cpu time: 37.44u 0.10s 37.54t Elapsed: 00:00:17
Start: Thu May 9 20:01:58 2013 End: Thu May 9 20:02:15 2013