BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010331
(513 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GXR9|DHNA_ARATH NADH dehydrogenase C1, chloroplastic/mitochondrial OS=Arabidopsis
thaliana GN=NDC1 PE=1 SV=2
Length = 519
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/495 (66%), Positives = 380/495 (76%), Gaps = 49/495 (9%)
Query: 44 FISFAASNSSGRNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVW 103
++S A +N+SG S++E+A +TY+WPD K+PR+CILGGGFGGLYTALRLESLVW
Sbjct: 49 YLSRAVTNNSGTTE----ISDNETAPRTYSWPDNKRPRVCILGGGFGGLYTALRLESLVW 104
Query: 104 QDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDRVKLLC 163
+DKKPQV+LVDQSERFVFKPMLYELLSGEVD WEIAPRF+DLL NTG+QF +DRVK L
Sbjct: 105 PEDKKPQVVLVDQSERFVFKPMLYELLSGEVDVWEIAPRFSDLLTNTGIQFLRDRVKTLL 164
Query: 164 PSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLED 223
P DHLGVNG GGTVLLESG +EYDWLVL+LGAE KLDVVPGA E AFPF TLED
Sbjct: 165 PCDHLGVNGSEISVTGGTVLLESGFKIEYDWLVLALGAESKLDVVPGAMELAFPFYTLED 224
Query: 224 ACRVDRKLSELERRNF-------------------------ERLEEKGIVQAINVETTIC 258
A RV+ KLS+LER+NF ERL+++GIVQ+INV I
Sbjct: 225 AIRVNEKLSKLERKNFKDGSAIKVAVVGCGYAGVELAATISERLQDRGIVQSINVSKNIL 284
Query: 259 PTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDK 318
+ GNREAA+KVL++RKVQL+LGY V+ I+R E +
Sbjct: 285 TSAPDGNREAAMKVLTSRKVQLLLGYLVQSIKRASNLE------------------EDEG 326
Query: 319 YILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLC 378
Y LELQPA +GLESQI EAD+VLWTVG+KPLL +EP + LPLNARGQAETDETL
Sbjct: 327 YFLELQPAERGLESQIIEADIVLWTVGAKPLLTKLEPSGPNV--LPLNARGQAETDETLR 384
Query: 379 VKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLG 438
VKGHPRIFALGDSS+LRDS+G+ LP TAQVAFQ+ADF GWN+WAAIN+RPLLPFRFQNLG
Sbjct: 385 VKGHPRIFALGDSSSLRDSNGKILPTTAQVAFQEADFTGWNIWAAINNRPLLPFRFQNLG 444
Query: 439 EMMILGRNDAAVSPSFVEGVTLDGPIGHSARKLAYLIRLPTDEHRLKVGVSWLTKSAIDS 498
EMM LGR DAA+SPSF+EG+TL+GPIGH+ARKLAYLIRLPTDEHR KVG+SW KSA+DS
Sbjct: 445 EMMTLGRYDAAISPSFIEGLTLEGPIGHAARKLAYLIRLPTDEHRFKVGISWFAKSAVDS 504
Query: 499 VALLQSTLTKVLSSS 513
+ALLQS LTKVLS S
Sbjct: 505 IALLQSNLTKVLSGS 519
>sp|O05267|YUMB_BACSU NADH dehydrogenase-like protein YumB OS=Bacillus subtilis (strain
168) GN=yumB PE=3 SV=1
Length = 406
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 165/387 (42%), Gaps = 46/387 (11%)
Query: 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWE 138
KP+I ILG G+GGL T RL V +D + LV++ ++E +G +
Sbjct: 5 KPKIVILGAGYGGLMTVTRLTKYVGPND--ADITLVNKHNYHYETTWMHEASAGTLHHDR 62
Query: 139 IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLS 198
+ D++ + V F +D VK + + V+L +G + +YD+LV+
Sbjct: 63 CRYQIKDVINQSRVNFVQDTVKAIKIDEK-------------KVVLANGEL-QYDYLVIG 108
Query: 199 LGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFERLEEKGIVQAINVETTIC 258
LGA P+ + G E+AFP + + + R+ R+ EL+ + EK + TI
Sbjct: 109 LGAVPETFGIKGLKEYAFPIANI-NTSRLLREHIELQFATYNTEAEKRPDR-----LTIV 162
Query: 259 PTGTPGNREAALKVLSARKVQLVLGYFV-RCIRRVGEFEASVK-----QPESGAIPNIAA 312
G L L+AR +L Y V R + R+ EA+ PE
Sbjct: 163 VGGAGFTGIEFLGELAARVPELCKEYDVDRSLVRIICVEAAPTVLPGFDPELVDYAVHYL 222
Query: 313 DKNSDKY-----ILELQP-----AIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHD 362
++N ++ + E P K E + ++ V+W G + P VE
Sbjct: 223 EENGVEFKIGTAVQECTPEGVRVGKKDEEPEQIKSQTVVWAAGVRG-HPIVEEAGFE--- 278
Query: 363 LPLNARGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQVAFQQADFAGWNLW 421
N RG+ + + L GH +F LGDSS + + + RP P TAQ+A QQ NL
Sbjct: 279 ---NMRGRVKVNPDLRAPGHDNVFILGDSSLFMNEDTERPYPPTAQIAMQQGITVAKNLG 335
Query: 422 AAINDRPLLPFRFQNLGEMMILGRNDA 448
I L F+ G + LG ++A
Sbjct: 336 RLIKGGELEEFKPDIKGTVASLGEHNA 362
>sp|Q4L4V6|Y2010_STAHJ NADH dehydrogenase-like protein SH2010 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=SH2010 PE=3 SV=1
Length = 402
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 166/390 (42%), Gaps = 53/390 (13%)
Query: 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWE 138
+ ++ +LG G+ GL T +L+ + D+ + L+++++ L+E +G ++
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKELSADE--ADITLINKNKYHYEATWLHEASAGTLN--- 59
Query: 139 IAPRFADLLANTGVQFFKDRVKLL-CPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVL 197
+ DL+ +D+VK + + N T+ G I +YD LV+
Sbjct: 60 ----YEDLIYPIESVIKEDKVKFINAEVTKIDRNAKKVETNHG--------IYDYDILVV 107
Query: 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFERLEEKGIVQAINVETTI 257
+LG E + + G ++AF +E A ++ R + E + N+ +EK + + I
Sbjct: 108 ALGFESETFGINGMKDYAFQIENIETARKLSRHI-EDKFANYAASKEKD-----DKDLAI 161
Query: 258 CPTGTPGNREAALKVLSARKVQLVLGYFVRCIR-RVGEFEASVKQPE--SGAIPNIAADK 314
G L L+ R +L Y V + RV EA+ K S + N A +
Sbjct: 162 LVGGAGFTGIEFLGELTERIPELCNKYGVDQNKVRVTCVEAAPKMLPMFSDELVNYAVNY 221
Query: 315 NSDKYILELQPAI-------KGL------ESQIFEADLVLWTVGSKPLLPHVEPPNNRLH 361
D+ + E + A KG + Q EA +W G + ++L
Sbjct: 222 LEDRGV-EFKIATPIVACNEKGFVVKINDQEQQLEAGTAIWAAGVR---------GSKLM 271
Query: 362 DLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQVAFQQADFAGW 418
+ RG+ T + L ++GH IF +GD SA + RPLP TAQ+A QQ +
Sbjct: 272 EESFEGVKRGRIVTKQDLTIEGHDDIFVIGDVSAFIPAGEERPLPTTAQIAMQQGEHVAK 331
Query: 419 NLWAAINDRPLLPFRFQNLGEMMILGRNDA 448
++ +N + F + + G + LG +D
Sbjct: 332 SIKNILNGQAATDFEYVDRGTVCSLGAHDG 361
>sp|Q49W80|Y1834_STAS1 NADH dehydrogenase-like protein SSP1834 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=SSP1834 PE=3 SV=1
Length = 402
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 164/408 (40%), Gaps = 89/408 (21%)
Query: 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWE 138
+ ++ +LG G+ GL T +L+ + D+ +V L+++++ L+E +G +
Sbjct: 5 RKKVLVLGAGYAGLQTITKLQKQISADE--AEVTLINKNDYHYEATWLHEASAGTI---- 58
Query: 139 IAPRFADLLANTGVQFFKDRVKLL-CPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVL 197
+ DLL KD+V + + N T G I ++D LV+
Sbjct: 59 ---SYEDLLYPVESVVNKDKVNFVKAEVTKIDRNAKKVETDAG--------IFDFDILVV 107
Query: 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRK--------------------------- 230
SLG E + + G ++AF + A ++ R
Sbjct: 108 SLGFESETFGIKGMKDYAFQIENVLTARKLSRHIEDKFANYASSKQKDDKDLAIIVGGAG 167
Query: 231 ------LSELERRNFERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 284
L EL R E + G+ Q+ V+ T EAA K+L +LV +
Sbjct: 168 FTGVEFLGELTDRIPELCNKYGVEQS-KVKITCV--------EAAPKMLPMFSDELV-NH 217
Query: 285 FVRCIRRVG-EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWT 343
V + G EF+ P +AA N +++++ E Q EA+ V+W
Sbjct: 218 AVNYLENKGVEFKIGT--------PIVAA--NEKGFVVKVND-----EEQQLEANTVVWA 262
Query: 344 VGSKPLLPHVEPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGR 400
G + ++L + RG+ T + L ++G+ IF +GD SA + R
Sbjct: 263 AGVR---------GSKLMEESFEGVKRGRIVTKQDLTIEGYDDIFVIGDCSAFIPAGEER 313
Query: 401 PLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDA 448
PLP TAQ+A QQ + N+ + +P F + + G + LG +D
Sbjct: 314 PLPTTAQIATQQGEHTAKNVKNILEGQPTNEFEYVDRGTVCSLGAHDG 361
>sp|Q5HQM1|Y527_STAEQ NADH dehydrogenase-like protein SERP0527 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=SERP0527 PE=3
SV=1
Length = 402
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 162/400 (40%), Gaps = 69/400 (17%)
Query: 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
+ + ++ +LG G+ GL T +L+ + D ++ L++++E L+E +G ++
Sbjct: 3 QDRKKVLVLGAGYAGLQTVTKLQKELSAD--AAEITLINKNEYHYESTWLHEASAGTIN- 59
Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPS-DHLGVNGPMACTHGGTVLLESGLIVEYDWL 195
+ DLL KD+V + + N T G + ++D L
Sbjct: 60 ------YEDLLYPVEKTVNKDKVNFVVAEVTKIDRNAKRVETDKG--------VYDFDIL 105
Query: 196 VLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFERLEEK-----GIVQA 250
V++LG + + G E AF + + ++ R + E + N+ +EK I+
Sbjct: 106 VVALGFVSETFGIDGMKEHAFQIENVLTSRKLSRHI-EDKFANYAASKEKDDKDLSILVG 164
Query: 251 INVETTICPTGTPGNR--------------------EAALKVLSARKVQLVLGYFVRCIR 290
T I G +R EAA K+L LV Y V+ +
Sbjct: 165 GAGFTGIEFLGELTDRIPELCSKYGVDQSKVKLTCVEAAPKMLPMFSDDLV-SYAVKYLE 223
Query: 291 RVG-EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPL 349
G EF+ A P +A N +++E+ E Q EA +WT G +
Sbjct: 224 DRGVEFKI--------ATPIVAC--NEKGFVVEVNG-----EKQQLEAGTSVWTAGVRG- 267
Query: 350 LPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQV 408
H+ + RG+ + L ++GH IF +GD SA + RPLP TAQ+
Sbjct: 268 -SHLMEES-----FEGVKRGRVINKQDLTIEGHNDIFVIGDCSAFIPAGEERPLPTTAQI 321
Query: 409 AFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDA 448
A QQ + N+ +N F++ N G + LG ND
Sbjct: 322 AMQQGEHTASNIKRLLNGESTQDFQYVNRGTVCSLGANDG 361
>sp|O80874|NDA2_ARATH Alternative NAD(P)H dehydrogenase 2, mitochondrial OS=Arabidopsis
thaliana GN=NDA2 PE=1 SV=1
Length = 508
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 178/461 (38%), Gaps = 75/461 (16%)
Query: 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVD 135
+ +KPR+ +LG G+ G +++ ++ V+ V VF P+L G ++
Sbjct: 68 EGEKPRVVVLGSGWAGCRLMKGIDTNLYD------VVCVSPRNHMVFTPLLASTCVGTLE 121
Query: 136 AWEIAPRFADLL----ANTGVQFFKDRVKLLCPSDHLGVNGPMAC---THGGTVLLESGL 188
+A + + G FF L H + C T G L
Sbjct: 122 FRSVAEPISRIQPAISREPGSFFFLANCSRLDADAH-----EVHCETLTDGLNTLKPWKF 176
Query: 189 IVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKL-------------SELE 235
+ YD LV++ GAE + G E A + A + RKL E +
Sbjct: 177 KIAYDKLVIASGAEASTFGIHGVMENAIFLREVHHAQEIRRKLLLNLMLSDTPGISKEEK 236
Query: 236 RRNFERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLV-----LGYFVRCIR 290
RR + G + + R+ V V L+ L F +R
Sbjct: 237 RRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRYAHVKDDIHVTLIEARDILSSFDDRLR 296
Query: 291 RVGEFEASVKQ-PESGA--IPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSK 347
R ++KQ +SG + I D S K IL+ G E L++W+ G
Sbjct: 297 RY-----AIKQLNKSGVRFVRGIVKDVQSQKLILD-----DGTE---VPYGLLVWSTGVG 343
Query: 348 PLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRP-LPATA 406
P P R LP + G+ DE + V +FA+GD S +++G+P LPA A
Sbjct: 344 P------SPFVRSLGLPKDPTGRIGIDEWMRVPSVQDVFAIGDCSGYLETTGKPTLPALA 397
Query: 407 QVAFQQADFAGWNLWAAIND------------RPLLPFRFQNLGEMMILGRNDAAV---S 451
QVA ++ + NL AI +PF +++LG M +GR A V
Sbjct: 398 QVAEREGKYLA-NLLNAIGKGNGGRANSAKEIELGVPFVYKHLGSMATIGRYKALVDLRE 456
Query: 452 PSFVEGVTLDGPIGHSARKLAYLIRLPTDEHRLKVGVSWLT 492
+G+++ G + + AYL R+ + +R V ++W T
Sbjct: 457 SKDAKGISMTGFVSWFIWRSAYLTRVISWRNRFYVAINWFT 497
>sp|Q8CPV5|Y635_STAES NADH dehydrogenase-like protein SE_0635 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_0635 PE=3 SV=1
Length = 402
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 162/400 (40%), Gaps = 69/400 (17%)
Query: 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
+ + ++ +LG G+ GL T +L+ + D ++ L++++E L+E +G ++
Sbjct: 3 QDRKKVLVLGAGYAGLQTVTKLQKELSAD--AAEITLINKNEYHYESTWLHEASAGTIN- 59
Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPS-DHLGVNGPMACTHGGTVLLESGLIVEYDWL 195
+ DLL K++V + + N T G + ++D L
Sbjct: 60 ------YEDLLYPVEKTVNKNKVNFVVAEVTKIDRNAKRVETDKG--------VYDFDIL 105
Query: 196 VLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFERLEEK-----GIVQA 250
V++LG + + G E AF + + ++ R + E + N+ +EK I+
Sbjct: 106 VVALGFVSETFGIDGMKEHAFQIENVLTSRKLSRHI-EDKFANYAASKEKDDKDLSILVG 164
Query: 251 INVETTICPTGTPGNR--------------------EAALKVLSARKVQLVLGYFVRCIR 290
T I G +R EAA K+L LV Y V+ +
Sbjct: 165 GAGFTGIEFLGELTDRIPELCSKYGVDQSKVKLTCVEAAPKMLPMFSDDLV-SYAVKYLE 223
Query: 291 RVG-EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPL 349
G EF+ A P +A N +++E+ E Q EA +WT G +
Sbjct: 224 DRGVEFKI--------ATPIVAC--NEKGFVVEVNG-----EKQQLEAGTSVWTAGVRG- 267
Query: 350 LPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQV 408
H+ + RG+ + L ++GH IF +GD SA + RPLP TAQ+
Sbjct: 268 -SHLMEES-----FEGVKRGRIINKQDLTIEGHNDIFVIGDCSAFIPADEERPLPTTAQI 321
Query: 409 AFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDA 448
A QQ + N+ +N F++ N G + LG ND
Sbjct: 322 AMQQGEHTASNIKRLLNGESTQDFQYVNRGTVCSLGANDG 361
>sp|P44856|DHNA_HAEIN NADH dehydrogenase OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=ndh PE=3 SV=1
Length = 444
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 154/367 (41%), Gaps = 46/367 (12%)
Query: 107 KKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDRVKLLCPSD 166
K+ +V LVD++ ++KP+L+E+ +G +D + + N F + + +
Sbjct: 28 KQAKVTLVDRNATHLWKPLLHEIATGVMDDGVDSLSYRAHGKNHFFSFEQGSIIRINREQ 87
Query: 167 HLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACR 226
P+ G +++ + YD+LV+++G++ G A+ + + A R
Sbjct: 88 KYVELAPVYGQEGDMLVIARR--IPYDYLVIAIGSKSNDFNTKGVADNCIFLDSSKQALR 145
Query: 227 VDRKLSEL-----ERRNFERLEEKGIVQAI----NVETTICPTGTPGNREAALKVLSARK 277
KL EL E R + + E+ Q + V I G G E ++ A +
Sbjct: 146 FQHKLLELFLKFSENRALDDIGEEEFKQKLVDENKVNIAIVGGGATG-VELTAELYHAAE 204
Query: 278 VQLVLGYFVRCIRRVGEFEASVKQP---ESG-----AIP-NIAA-----------DKNSD 317
GY G+ ++S Q E+G A+P N++A + +
Sbjct: 205 DLSSYGY--------GKIDSSCLQVTLVEAGTRLLPALPENLSAAVLDELKEMGTNVQLN 256
Query: 318 KYILELQP-AIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDET 376
I E QP + + +ADL++W G + + L +N Q +T
Sbjct: 257 TMITEAQPNTLITKDGGEIKADLIVWAAGVRA-----STVTQQFDGLEINRINQLVVKDT 311
Query: 377 LCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQN 436
L IFA+GD +AL S+G+ +P AQ A Q A N++A ++PL F++ +
Sbjct: 312 LQTTVDDSIFAIGDCAALIQSNGKLVPPRAQAAHQMAKACAKNIFALFENKPLKSFKYND 371
Query: 437 LGEMMIL 443
G ++ L
Sbjct: 372 KGTLVSL 378
>sp|Q8NXG0|Y823_STAAW NADH dehydrogenase-like protein MW0823 OS=Staphylococcus aureus
(strain MW2) GN=MW0823 PE=3 SV=1
Length = 402
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 174/439 (39%), Gaps = 78/439 (17%)
Query: 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
+ + ++ +LG G+ GL T +L+ + ++ ++ L++++E L+E +G ++
Sbjct: 3 QDRKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNY 60
Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196
++ +L V F + V + + T+ G I ++D LV
Sbjct: 61 EDVLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILV 106
Query: 197 LSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFERLEEK---------GI 247
++LG + + G + AF + A + R + E + N+ +EK G
Sbjct: 107 VALGFVSETFGIEGMKDHAFQIENVITARELSRHI-EDKFANYAASKEKDDNDLSILVGG 165
Query: 248 VQAINVET---------TICPT-GTPGNR------EAALKVLSARKVQLVLGYFVRCIRR 291
VE +C G N+ EAA K+L +LV R
Sbjct: 166 AGFTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDR 225
Query: 292 VGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 351
EF+ A P +A N +++E+ E Q A +W G +
Sbjct: 226 GVEFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAAGVR---- 266
Query: 352 HVEPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQV 408
++L + RG+ T + L + G+ IF +GD SA + RPLP TAQ+
Sbjct: 267 -----GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQI 321
Query: 409 AFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLDGPIGHSA 468
A QQ + N+ +N F + + G + LG +D G+ D PI +
Sbjct: 322 AMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFDKPI--AG 372
Query: 469 RKLAYLIRLPTDEHRLKVG 487
+K A++ ++ K+G
Sbjct: 373 KKAAFMKKVIDTRAVFKIG 391
>sp|Q6GAY5|Y811_STAAS NADH dehydrogenase-like protein SAS0811 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS0811 PE=3 SV=1
Length = 402
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 174/439 (39%), Gaps = 78/439 (17%)
Query: 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
+ + ++ +LG G+ GL T +L+ + ++ ++ L++++E L+E +G ++
Sbjct: 3 QDRKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNY 60
Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196
++ +L V F + V + + T+ G I ++D LV
Sbjct: 61 EDVLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILV 106
Query: 197 LSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFERLEEK---------GI 247
++LG + + G + AF + A + R + E + N+ +EK G
Sbjct: 107 VALGFVSETFGIEGMKDHAFQIENVITARELSRHI-EDKFANYAASKEKDDNDLSILVGG 165
Query: 248 VQAINVET---------TICPT-GTPGNR------EAALKVLSARKVQLVLGYFVRCIRR 291
VE +C G N+ EAA K+L +LV R
Sbjct: 166 AGFTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDR 225
Query: 292 VGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 351
EF+ A P +A N +++E+ E Q A +W G +
Sbjct: 226 GVEFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAAGVR---- 266
Query: 352 HVEPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQV 408
++L + RG+ T + L + G+ IF +GD SA + RPLP TAQ+
Sbjct: 267 -----GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQI 321
Query: 409 AFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLDGPIGHSA 468
A QQ + N+ +N F + + G + LG +D G+ D PI +
Sbjct: 322 AMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFDKPI--AG 372
Query: 469 RKLAYLIRLPTDEHRLKVG 487
+K A++ ++ K+G
Sbjct: 373 KKAAFMKKVIDTRAVFKIG 391
>sp|P80861|YJLD_BACSU NADH dehydrogenase-like protein YjlD OS=Bacillus subtilis (strain
168) GN=yjlD PE=1 SV=3
Length = 392
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 368 RGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 427
RG+A ++ L H +F GDS+ GRP P TAQ+A+Q + G+NL+A + +
Sbjct: 273 RGRATVNDFLQSTSHEDVFVAGDSAVYFGPDGRPYPPTAQIAWQMGELIGYNLFAYLEGK 332
Query: 428 PLLPFRFQNLGEMMILGRNDA 448
L F+ N G + LGR DA
Sbjct: 333 TLETFKPVNSGTLASLGRKDA 353
>sp|Q2YWP9|Y807_STAAB NADH dehydrogenase-like protein SAB0807 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB0807 PE=3 SV=1
Length = 402
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 172/437 (39%), Gaps = 78/437 (17%)
Query: 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWE 138
+ ++ +LG G+ GL T +L+ + ++ ++ L++++E L+E +G ++ +
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKTISTEE--AEITLINKNEYHYEATWLHEASAGTLNYED 62
Query: 139 IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLS 198
+ +L V F + V + + T+ G I ++D LV++
Sbjct: 63 VLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILVVA 108
Query: 199 LGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFERLEEK---------GIVQ 249
LG + + G + AF + A + R + E + N+ +EK G
Sbjct: 109 LGFVSETFGIEGMKDHAFQIENVITARELSRHI-EDKFANYAASKEKDDNDLSILVGGAG 167
Query: 250 AINVET---------TICPT-GTPGNR------EAALKVLSARKVQLVLGYFVRCIRRVG 293
VE +C G N+ EAA K+L +LV R
Sbjct: 168 FTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 294 EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 353
EF+ A P +A N +++E+ E Q A +W G +
Sbjct: 228 EFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAAGVR------ 266
Query: 354 EPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQVAF 410
++L + RG+ T + L + G+ IF +GD SA + RPLP TAQ+A
Sbjct: 267 ---GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAM 323
Query: 411 QQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLDGPIGHSARK 470
QQ + N+ +N F + + G + LG +D G+ PI + +K
Sbjct: 324 QQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFGKPI--AGKK 374
Query: 471 LAYLIRLPTDEHRLKVG 487
A++ ++ K+G
Sbjct: 375 AAFMKKVIDTRAVFKIG 391
>sp|Q5HHE4|Y944_STAAC NADH dehydrogenase-like protein SACOL0944 OS=Staphylococcus aureus
(strain COL) GN=SACOL0944 PE=3 SV=1
Length = 402
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 172/437 (39%), Gaps = 78/437 (17%)
Query: 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWE 138
+ ++ +LG G+ GL T +L+ + ++ ++ L++++E L+E +G ++ +
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNYED 62
Query: 139 IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLS 198
+ +L V F + V + + T+ G I ++D LV++
Sbjct: 63 VLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILVVA 108
Query: 199 LGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFERLEEK---------GIVQ 249
LG + + G + AF + A + R + E + N+ +EK G
Sbjct: 109 LGFVSETFGIEGMKDHAFQIENVITARELSRHI-EDKFANYAASKEKDDNDLSILVGGAG 167
Query: 250 AINVET---------TICPT-GTPGNR------EAALKVLSARKVQLVLGYFVRCIRRVG 293
VE +C G N+ EAA K+L +LV R
Sbjct: 168 FTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 294 EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 353
EF+ A P +A N +++E+ E Q A +W G +
Sbjct: 228 EFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAAGVR------ 266
Query: 354 EPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQVAF 410
++L + RG+ T + L + G+ IF +GD SA + RPLP TAQ+A
Sbjct: 267 ---GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAM 323
Query: 411 QQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLDGPIGHSARK 470
QQ + N+ +N F + + G + LG +D G+ PI + +K
Sbjct: 324 QQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFGKPI--AGKK 374
Query: 471 LAYLIRLPTDEHRLKVG 487
A++ ++ K+G
Sbjct: 375 AAFMKKVIDTRAVFKIG 391
>sp|Q99VE0|Y941_STAAM NADH dehydrogenase-like protein SAV0941 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV0941 PE=1 SV=1
Length = 402
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 172/437 (39%), Gaps = 78/437 (17%)
Query: 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWE 138
+ ++ +LG G+ GL T +L+ + ++ ++ L++++E L+E +G ++ +
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNYED 62
Query: 139 IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLS 198
+ +L V F + V + + T+ G I ++D LV++
Sbjct: 63 VLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILVVA 108
Query: 199 LGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFERLEEK---------GIVQ 249
LG + + G + AF + A + R + E + N+ +EK G
Sbjct: 109 LGFVSETFGIEGMKDHAFQIENVITARELSRHI-EDKFANYAASKEKDDNDLSILVGGAG 167
Query: 250 AINVET---------TICPT-GTPGNR------EAALKVLSARKVQLVLGYFVRCIRRVG 293
VE +C G N+ EAA K+L +LV R
Sbjct: 168 FTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 294 EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 353
EF+ A P +A N +++E+ E Q A +W G +
Sbjct: 228 EFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAAGVR------ 266
Query: 354 EPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQVAF 410
++L + RG+ T + L + G+ IF +GD SA + RPLP TAQ+A
Sbjct: 267 ---GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAM 323
Query: 411 QQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLDGPIGHSARK 470
QQ + N+ +N F + + G + LG +D G+ PI + +K
Sbjct: 324 QQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFGKPI--AGKK 374
Query: 471 LAYLIRLPTDEHRLKVG 487
A++ ++ K+G
Sbjct: 375 AAFMKKVIDTRAVFKIG 391
>sp|Q6GIE7|Y903_STAAR NADH dehydrogenase-like protein SAR0903 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR0903 PE=3 SV=1
Length = 402
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 172/437 (39%), Gaps = 78/437 (17%)
Query: 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWE 138
+ ++ +LG G+ GL T +L+ + ++ ++ L++++E L+E +G ++ +
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNYED 62
Query: 139 IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLS 198
+ +L V F + V + + T+ G I ++D LV++
Sbjct: 63 VLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILVVA 108
Query: 199 LGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFERLEEK---------GIVQ 249
LG + + G + AF + A + R + E + N+ +EK G
Sbjct: 109 LGFVSETFGIEGMKDHAFQIENVITARELSRHI-EDKFANYAASKEKDDNDLSILVGGAG 167
Query: 250 AINVET---------TICPT-GTPGNR------EAALKVLSARKVQLVLGYFVRCIRRVG 293
VE +C G N+ EAA K+L +LV R
Sbjct: 168 FTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 294 EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 353
EF+ A P +A N +++E+ E Q A +W G +
Sbjct: 228 EFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAAGVR------ 266
Query: 354 EPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQVAF 410
++L + RG+ T + L + G+ IF +GD SA + RPLP TAQ+A
Sbjct: 267 ---GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAM 323
Query: 411 QQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLDGPIGHSARK 470
QQ + N+ +N F + + G + LG +D G+ PI + +K
Sbjct: 324 QQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFGKPI--AGKK 374
Query: 471 LAYLIRLPTDEHRLKVG 487
A++ ++ K+G
Sbjct: 375 AAFMKKVIDTRAVFKIG 391
>sp|Q2FZV7|Y878_STAA8 NADH dehydrogenase-like protein SAOUHSC_00878 OS=Staphylococcus
aureus (strain NCTC 8325) GN=SAOUHSC_00878 PE=3 SV=1
Length = 402
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 172/437 (39%), Gaps = 78/437 (17%)
Query: 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWE 138
+ ++ +LG G+ GL T +L+ + ++ ++ L++++E L+E +G ++ +
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNYED 62
Query: 139 IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLS 198
+ +L V F + V + + T+ G I ++D LV++
Sbjct: 63 VLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILVVA 108
Query: 199 LGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFERLEEK---------GIVQ 249
LG + + G + AF + A + R + E + N+ +EK G
Sbjct: 109 LGFVSETFGIEGMKDHAFQIENVITARELSRHI-EDKFANYAASKEKDDNDLSILVGGAG 167
Query: 250 AINVET---------TICPT-GTPGNR------EAALKVLSARKVQLVLGYFVRCIRRVG 293
VE +C G N+ EAA K+L +LV R
Sbjct: 168 FTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 294 EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 353
EF+ A P +A N +++E+ E Q A +W G +
Sbjct: 228 EFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAAGVR------ 266
Query: 354 EPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQVAF 410
++L + RG+ T + L + G+ IF +GD SA + RPLP TAQ+A
Sbjct: 267 ---GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAM 323
Query: 411 QQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLDGPIGHSARK 470
QQ + N+ +N F + + G + LG +D G+ PI + +K
Sbjct: 324 QQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFGKPI--AGKK 374
Query: 471 LAYLIRLPTDEHRLKVG 487
A++ ++ K+G
Sbjct: 375 AAFMKKVIDTRAVFKIG 391
>sp|Q2FID4|Y844_STAA3 NADH dehydrogenase-like protein SAUSA300_0844 OS=Staphylococcus
aureus (strain USA300) GN=SAUSA300_0844 PE=3 SV=1
Length = 402
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 172/437 (39%), Gaps = 78/437 (17%)
Query: 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWE 138
+ ++ +LG G+ GL T +L+ + ++ ++ L++++E L+E +G ++ +
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNYED 62
Query: 139 IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLS 198
+ +L V F + V + + T+ G I ++D LV++
Sbjct: 63 VLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILVVA 108
Query: 199 LGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFERLEEK---------GIVQ 249
LG + + G + AF + A + R + E + N+ +EK G
Sbjct: 109 LGFVSETFGIEGMKDHAFQIENVITARELSRHI-EDKFANYAASKEKDDNDLSILVGGAG 167
Query: 250 AINVET---------TICPT-GTPGNR------EAALKVLSARKVQLVLGYFVRCIRRVG 293
VE +C G N+ EAA K+L +LV R
Sbjct: 168 FTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 294 EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 353
EF+ A P +A N +++E+ E Q A +W G +
Sbjct: 228 EFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAAGVR------ 266
Query: 354 EPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQVAF 410
++L + RG+ T + L + G+ IF +GD SA + RPLP TAQ+A
Sbjct: 267 ---GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAM 323
Query: 411 QQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLDGPIGHSARK 470
QQ + N+ +N F + + G + LG +D G+ PI + +K
Sbjct: 324 QQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFGKPI--AGKK 374
Query: 471 LAYLIRLPTDEHRLKVG 487
A++ ++ K+G
Sbjct: 375 AAFMKKVIDTRAVFKIG 391
>sp|Q7A6J4|Y802_STAAN NADH dehydrogenase-like protein SA0802 OS=Staphylococcus aureus
(strain N315) GN=SA0802 PE=1 SV=1
Length = 402
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 172/437 (39%), Gaps = 78/437 (17%)
Query: 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWE 138
+ ++ +LG G+ GL T +L+ + ++ ++ L++++E L+E +G ++ +
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNYED 62
Query: 139 IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLS 198
+ +L V F + V + + T+ G I ++D LV++
Sbjct: 63 VLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILVVA 108
Query: 199 LGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFERLEEK---------GIVQ 249
LG + + G + AF + A + R + E + N+ +EK G
Sbjct: 109 LGFVSETFGIEGMKDHAFQIENVITARELSRHI-EDKFANYAASKEKDDNDLSILVGGAG 167
Query: 250 AINVET---------TICPT-GTPGNR------EAALKVLSARKVQLVLGYFVRCIRRVG 293
VE +C G N+ EAA K+L +LV R
Sbjct: 168 FTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 294 EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 353
EF+ A P +A N +++E+ E Q A +W G +
Sbjct: 228 EFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAAGVR------ 266
Query: 354 EPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQVAF 410
++L + RG+ T + L + G+ IF +GD SA + RPLP TAQ+A
Sbjct: 267 ---GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAM 323
Query: 411 QQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLDGPIGHSARK 470
QQ + N+ +N F + + G + LG +D G+ PI + +K
Sbjct: 324 QQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFGKPI--AGKK 374
Query: 471 LAYLIRLPTDEHRLKVG 487
A++ ++ K+G
Sbjct: 375 AAFMKKVIDTRAVFKIG 391
>sp|O14121|NDH1_SCHPO Probable NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC3A11.07 PE=3 SV=1
Length = 551
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 190/486 (39%), Gaps = 102/486 (20%)
Query: 75 PDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEV 134
PD K + +LG G+G +++ ++ V++V F+F +L +G V
Sbjct: 87 PDPSKKTLVVLGAGWGATSILRTIDTSLFN------VIVVSPRNYFLFTSLLPSTATGSV 140
Query: 135 DAWEIAPRFADLLANTG--VQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEY 192
I +L + V+F++ + +D ++ T G + E ++Y
Sbjct: 141 HTRSIVQPIRYMLRHKSCYVKFYEAECTDV-DADKKVIHIKKTTTDGVDLEQE----IKY 195
Query: 193 DWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVD-RKLSELERRNFERLEEKGIVQAI 251
D+LV S GAE + +PG AE+ + DA ++ R L LE+ F+ L + + +
Sbjct: 196 DYLVCSHGAETQTFNIPGIAEYGCFLKEIWDAQKIRARILHCLEQAQFKDLPAETRRRYV 255
Query: 252 NVETTICPTGTPGNREAA---------------------LKVLSARKVQLVLGYFVRCIR 290
+ T+ G P E A V + VL F +R
Sbjct: 256 H---TVVVGGGPTGMEFAGEMADFIEDDLKSWYPELADDFAVTLVEALPSVLPMFSAKLR 312
Query: 291 RVGE--FEAS-VKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVG-- 345
+ F++S +K + A+ + A+ +E++ + ++ L++W G
Sbjct: 313 DYTQSLFDSSHIKIRTNTALKKVTAENIH----VEVKNPDGSKQEEVIPYGLLVWAGGNR 368
Query: 346 ----SKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRP 401
+K L+ E NNR RG DE L +KG+ IFALGD + ++ P
Sbjct: 369 ARPLTKKLMEGSEEQNNR--------RGLV-VDEYLKLKGYKDIFALGDCT---HTAYAP 416
Query: 402 LPATAQVAFQQADFAG--WNLWAAIN------DRPL------------------------ 429
TAQVA QQ + G +N ++N DR +
Sbjct: 417 ---TAQVASQQGAYLGQLFNKLGSLNFEKPSEDRHIALGDEMDSSTLISLANEKHASTKV 473
Query: 430 -LPFRFQNLGEMMILGRNDAAVS---PSFVEGVTLDGPIGHSARKLAYLIRLPTDEHRLK 485
LPF++ + G + +G A P F + + G + + YL L + +R
Sbjct: 474 FLPFKYSHQGSLAYVGHEKAIADIEVPWFGKQLHASGALAFYFWRSVYLSELYSLRNRTN 533
Query: 486 VGVSWL 491
V + W+
Sbjct: 534 VTLDWI 539
>sp|P00393|DHNA_ECOLI NADH dehydrogenase OS=Escherichia coli (strain K12) GN=ndh PE=1
SV=2
Length = 434
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 145/357 (40%), Gaps = 40/357 (11%)
Query: 107 KKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDRVKLLCPSD 166
KK ++ LVD++ ++KP+L+E+ +G +D A + N G QF V +
Sbjct: 32 KKAKITLVDRNHSHLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREA 91
Query: 167 HLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACR 226
+ G ++ E + YD LV++LG+ PG E A R
Sbjct: 92 KTITIAELRDEKGELLVPERK--IAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARR 149
Query: 227 VDRKLSELERRNFERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFV 286
+++ L + L G V I G G E + ++ +A K GY
Sbjct: 150 FHQEMLNLFLKYSANLGANG-----KVNIAIVGGGATG-VELSAELHNAVKQLHSYGY-- 201
Query: 287 RCIRRVGEFEASVKQPESGAI------PNIAADKNSDKYILELQPAIKGL---------- 330
+ + +V E+G P I+A +++ L ++ + +
Sbjct: 202 ---KGLTNEALNVTLVEAGERILPALPPRISAAAHNELTKLGVRVLTQTMVTSADEGGLH 258
Query: 331 --ESQIFEADLVLWTVGSKPLLPHVEPPN--NRLHDLPLNARGQAETDETLCVKGHPRIF 386
+ + EADL++W G ++ P+ + L N Q + TL P I+
Sbjct: 259 TKDGEYIEADLMVWAAG-------IKAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDIY 311
Query: 387 ALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMIL 443
A+GD ++ G +P AQ A Q A A N+ A +N +PL +++++ G ++ L
Sbjct: 312 AIGDCASCPRPEGGFVPPRAQAAHQMATCAMNNILAQMNGKPLKNYQYKDHGSLVSL 368
>sp|P32340|NDI1_YEAST Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=NDI1 PE=1 SV=1
Length = 513
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 183/479 (38%), Gaps = 97/479 (20%)
Query: 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWE 138
KP + ILG G+G + L D KK V ++ F+F P+L G VD
Sbjct: 53 KPNVLILGSGWGAI------SFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKS 106
Query: 139 IAPRFAD--LLANTGVQFFK--------DR-----------VKLLCPSDHLGVNGPMACT 177
I + L V +++ DR +L P +HLG++
Sbjct: 107 IIEPIVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAE 166
Query: 178 HGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLS-ELER 236
++YD+L+ ++GAEP +PG ++ + ++ + R + LE+
Sbjct: 167 ------------IKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEK 214
Query: 237 RNFERLEEKGIVQAINVETTICPTGTPGNREAALKVLS-------------ARKVQLVLG 283
N L KG + + + + G P EAA ++ A +VQ+ L
Sbjct: 215 AN---LLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLV 271
Query: 284 YFVRCIRRVGEFEASVKQPESGAIPNI--------AADKNSDKYILELQPAIKG-LESQI 334
+ + + FE + + N A K +K +L G + +
Sbjct: 272 EALPIV--LNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEET 329
Query: 335 FEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSAL 394
++W G+K P + ++ + + RG A D L VKG IFA+GD++
Sbjct: 330 IPYGTLIWATGNKAR-PVITDLFKKIPEQNSSKRGLAVND-FLQVKGSNNIFAIGDNAF- 386
Query: 395 RDSSGRPLPATAQVAFQQADFAGWNL--WAAI------------------NDRPLLPFRF 434
+G LP TAQVA Q+A++ N A I + PF++
Sbjct: 387 ---AG--LPPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKY 441
Query: 435 QNLGEMMILG--RNDAAVSPSFVEGVTLDGPIGHSARKLAYLIRLPTDEHRLKVGVSWL 491
+LG + LG R A + T G + ++ YL + + RLKV W+
Sbjct: 442 NDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWI 500
>sp|Q8GWA1|NDA1_ARATH Alternative NAD(P)H dehydrogenase 1, mitochondrial OS=Arabidopsis
thaliana GN=NDA1 PE=2 SV=1
Length = 510
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 15/146 (10%)
Query: 362 DLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRP-LPATAQVAFQQADF----- 415
D P + G+ DE + V +FA+GD S +S+G+ LPA AQVA ++ +
Sbjct: 354 DFPKDPGGRIGIDEWMRVPSVQDVFAIGDCSGYLESTGKSTLPALAQVAEREGKYLANLF 413
Query: 416 -----AGWNLWAAINDRPL-LPFRFQNLGEMMILGRNDAAV---SPSFVEGVTLDGPIGH 466
AG + + L PF +++LG M +GR A V +G+++ G +
Sbjct: 414 NVMGKAGGGRANSAKEMELGEPFVYKHLGSMATIGRYKALVDLRESKEGKGISMAGFLSW 473
Query: 467 SARKLAYLIRLPTDEHRLKVGVSWLT 492
+ AYL R+ + +R V ++WLT
Sbjct: 474 FIWRSAYLTRVVSWRNRFYVAINWLT 499
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 18/161 (11%)
Query: 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAW 137
+KPR+ +LG G+ G +++ ++ V+ V VF P+L G ++
Sbjct: 72 EKPRVLVLGSGWAGCRVLKGIDTSIYD------VVCVSPRNHMVFTPLLASTCVGTLEFR 125
Query: 138 EIAPRFADLL----ANTGVQFFKDRVKLLCPSDHLGVNGPMAC---THGGTVLLESGLIV 190
+A + + G +F L +H + C T G + L +
Sbjct: 126 SVAEPISRIQPAISREPGSYYFLANCSKLDADNH-----EVHCETVTEGSSTLKPWKFKI 180
Query: 191 EYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKL 231
YD LVL+ GAE + G E A + A + RKL
Sbjct: 181 AYDKLVLACGAEASTFGINGVLENAIFLREVHHAQEIRRKL 221
>sp|Q55CD9|NDH_DICDI Probable NADH dehydrogenase OS=Dictyostelium discoideum
GN=DDB_G0270104 PE=3 SV=2
Length = 451
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 339 LVLWT--VGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRD 396
L++W+ +G PL+ + ++ + D+ L VK + +F+ GD + + +
Sbjct: 297 LLVWSTGIGQHPLVKN--------SSFEKDSHDRIIVDDHLRVKNYSNVFSFGDCANVEN 348
Query: 397 SSGRPLPATAQVAFQQADFAG--WNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSF 454
+ P TAQVA Q A + +N +N P PF F+ LG + G+ + F
Sbjct: 349 ---KNYPPTAQVASQSAVYLAKEFNNLEKLNPNPPKPFAFKFLGLLAYTGKKSGILQTDF 405
Query: 455 VEGVTLDGPIGHSARKLAYLIRLPTDEHRLKVGVSWL 491
+ L G IG + AYL RL + +++V W+
Sbjct: 406 FD---LSGFIGFITWRSAYLTRLGSLRSKIQVPFDWM 439
>sp|Q9SKT7|NDB4_ARATH NAD(P)H dehydrogenase B4, mitochondrial OS=Arabidopsis thaliana
GN=NDB4 PE=1 SV=1
Length = 582
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 146/362 (40%), Gaps = 51/362 (14%)
Query: 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAW 137
+K ++ +LG G+ G L + ++ V +V F+F P+L + +G V+A
Sbjct: 62 RKKKVVVLGSGWSGY------SFLSYLNNPNYDVQVVSPRNFFLFTPLLPSVTNGTVEAR 115
Query: 138 EIAPRFADLLANTGVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196
I L+ G ++ + + VK+ + + + GT + ++YD L+
Sbjct: 116 SIVEPIRGLMRKKGFEYKEAECVKIDASNKKIHCRSKEGSSLKGTTEFD----MDYDILI 171
Query: 197 LSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERR----NFERLEEKGIVQAIN 252
L++GA+P PG E A+ EDA + + + R N E K I+ +
Sbjct: 172 LAVGAKPNTFNTPGVEEHAYFLKEAEDALNIRHSVIDCFERASLPNLTEEERKKILHFVV 231
Query: 253 VETTICPTGTPGNREAAL---------KVLSARKVQL------VLGYFVRCIRRVGE--F 295
V L KV K+ L +L F + I E F
Sbjct: 232 VGGGPTGVEFSAELHDFLVQDVAKIYPKVQEFTKITLLEAGDHILNMFDKRITAFAEEKF 291
Query: 296 EASVKQPESGA-IPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWT--VGSKPLLPH 352
+ ++G+ + + AD+ S K + + S+ + +V+W+ +GS+P++
Sbjct: 292 QRDGIDLKTGSMVVGVTADEISTK-----ERETGKIVSEPY--GMVVWSTGIGSRPVI-- 342
Query: 353 VEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQ 412
+ + + R TDE L V+G ++ALGD++ + R + F +
Sbjct: 343 ----KDFMQQIGQGQRRVLATDEWLRVEGCDGVYALGDTATINQ---RRVMEDIAAIFNK 395
Query: 413 AD 414
AD
Sbjct: 396 AD 397
>sp|O43090|NDH2_SCHPO Probable NADH-ubiquinone oxidoreductase C947.15c, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC947.15c PE=3 SV=1
Length = 551
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 41/160 (25%)
Query: 367 ARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA---- 422
AR DE VKG P ++A+GD + SG LPATAQVA QQ + NL
Sbjct: 386 ARKGLIVDEFFRVKGVPEMYAVGDCAF----SG--LPATAQVANQQGAWLAKNLNVEGKK 439
Query: 423 -AINDR---------------------------PLLPFRFQNLGEMMILGRNDAAVS--- 451
A+++R L PF++ + G + +G A
Sbjct: 440 FALHERIQALEKQLGEKEAPSQVAGLKQQVEQLKLEPFKYHHQGALAYVGDEKAIADLKL 499
Query: 452 PSFVEGVTLDGPIGHSARKLAYLIRLPTDEHRLKVGVSWL 491
P + + L G +GH+ +LAYL L + + V + WL
Sbjct: 500 PFMKKMLPLQGIVGHTFWRLAYLNELISARSQFMVLIDWL 539
>sp|O32117|YUTJ_BACSU NADH dehydrogenase-like protein YutJ OS=Bacillus subtilis (strain
168) GN=yutJ PE=3 SV=2
Length = 355
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 127/347 (36%), Gaps = 73/347 (21%)
Query: 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIA 140
++ ++GGG+G + RL DD + L+D++ K Y L +G + I
Sbjct: 3 KLVLIGGGYGNMRVLHRLLPNQLPDDVS--ITLIDRNPYHCLKTEYYALAAGTISDHHIR 60
Query: 141 ---PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVL 197
P L G D V+ VL + + YD ++
Sbjct: 61 VSFPEHPRLDVQYGDITSIDIVQ-------------------KQVLFQDREPISYDDAII 101
Query: 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFERLEEKGIVQAINVETTI 257
LG E K VPGA EF + T++ + +KL+ L + N I
Sbjct: 102 GLGCEDKYHNVPGAPEFTYSIQTIDQSRETYQKLNNL---------------SANATVAI 146
Query: 258 CPTGTPGNREAA--------LKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPN 309
G G A+ L ++ + L+L F R+ ++ + I N
Sbjct: 147 VGAGLSGVELASELRESRDDLNIILFDRGNLILSSFP---ERLSKYVQKWFEEHGVRIIN 203
Query: 310 IAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPL--NA 367
A I +++ + AD ++WT G + PN + DL + +A
Sbjct: 204 RAN-------ITKVEEGVVYNHDDPISADAIVWTAGIQ--------PNKVVRDLDVEKDA 248
Query: 368 RGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQAD 414
+G+ + G ++ +GD ++L P +AQ+A QA+
Sbjct: 249 QGRIVLTPHHNLPGDEHLYVVGDCASL------PHAPSAQLAEAQAE 289
>sp|Q9BRQ8|AIFM2_HUMAN Apoptosis-inducing factor 2 OS=Homo sapiens GN=AIFM2 PE=1 SV=1
Length = 373
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 365 LNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAI 424
L + G +E L V+GH ++A+GD + +R P A +A A+ A N+ ++
Sbjct: 260 LASSGALRVNEHLQVEGHSNVYAIGDCADVRT------PKMAYLAGLHANIAVANIVNSV 313
Query: 425 NDRPLLPFRFQNLGEMMILGRND 447
RPL ++ L ++ +GRND
Sbjct: 314 KQRPLQAYKPGALTFLLSMGRND 336
>sp|A5PJM4|AIFM2_BOVIN Apoptosis-inducing factor 2 OS=Bos taurus GN=AIFM2 PE=2 SV=1
Length = 373
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 365 LNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAI 424
L + G +E L V+G+ I+A+GD + +R+ P A A A+ A N+ ++
Sbjct: 260 LASNGALRVNEYLQVEGYSHIYAIGDCADVRE------PKMAYHASLHANVAVANIVNSM 313
Query: 425 NDRPLLPFRFQNLGEMMILGRND 447
RPL ++ +L ++ +GRND
Sbjct: 314 KQRPLKTYKPGSLTFLLAMGRND 336
>sp|F4JJJ3|NDB3_ARATH NAD(P)H dehydrogenase B3, mitochondrial OS=Arabidopsis thaliana
GN=NDB3 PE=2 SV=1
Length = 580
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 153/389 (39%), Gaps = 61/389 (15%)
Query: 57 GDLVVTSE-DESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVD 115
G L+V SE + S S +K ++ +LG G+ G A L++L ++ +V ++
Sbjct: 32 GGLIVYSEANPSYSNNGVETKTRKRKVVLLGTGWAG---ASFLKTL---NNSSYEVQVIS 85
Query: 116 QSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQF-------FK---DRVKLLCPS 165
F F P+L + G V+A + ++ V+ FK K+ C S
Sbjct: 86 PRNYFAFTPLLPSVTCGTVEARSVVEPIRNIARKQNVEMSFLEAECFKIDPGSKKVYCRS 145
Query: 166 DHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDAC 225
GVN + V+YD+LV++ GA+ +PG E +EDA
Sbjct: 146 KQ-GVNSKG----------KKEFDVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQ 194
Query: 226 RVDRK-LSELERRNFERLEEKGIVQAINVETTICPTGTPG--------NREAALKVLSAR 276
R+ + E+ + L E+ + ++ E +K+
Sbjct: 195 RIRSTVIDSFEKASLPGLNEQERKRMLHFVVVGGGPTGVEFASELHDFVNEDLVKLYPKA 254
Query: 277 K--VQLVLGYFVRCI-----RRVGEFEASVKQPESGAIPNIAAD--KNSDKYILELQPAI 327
K VQ+ L I +R+ EF A K G + + K +DK E+
Sbjct: 255 KNLVQITLLEAADHILTMFDKRITEF-AEEKFTRDGIDVKLGSMVVKVNDK---EISAKT 310
Query: 328 KGLESQIFEADLVLWT--VGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRI 385
K E +++W+ +G++P++ + + + R TDE L V+G I
Sbjct: 311 KAGEVSTIPYGMIVWSTGIGTRPVI------KDFMKQIGQGNRRALATDEWLRVEGCDNI 364
Query: 386 FALGDSSALRDSSGRPLPATAQVAFQQAD 414
+ALGD + + R + F++AD
Sbjct: 365 YALGDCATINQ---RKVMEDIAAIFKKAD 390
>sp|Q58065|NAOX_METJA Putative NADH oxidase OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ0649 PE=3 SV=2
Length = 448
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 157/393 (39%), Gaps = 65/393 (16%)
Query: 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-LYELLSGEVDAWEI 139
R I+G G GL TA S + + +K +++++ + + + P + ++ G + +
Sbjct: 2 RAIIIGSGAAGLTTA----STIRKYNKDMEIVVITKEKEIAYSPCAIPYVIEGAIKS--- 54
Query: 140 APRFADLLANTGVQFFKDR-VKLLCPSDHLGV---NGPMACTHGGTVLLESGLIVEYDWL 195
F D++ +T + ++R + +L + + V N + C E + YD+L
Sbjct: 55 ---FDDIIMHTPEDYKRERNIDILTETTVIDVDSKNNKIKCVDKDGNEFE----MNYDYL 107
Query: 196 VLSLGAEPKLDVVPGA-AEFAFPFSTLEDACRVDRKLSELERRNFERLEEKGIVQAINVE 254
VL+ GAEP + + G + F T+ED + L +E +++ G AI +E
Sbjct: 108 VLATGAEPFIPPIEGKDLDGVFKVRTIEDGRAI---LKYIEENGCKKVAVVG-AGAIGLE 163
Query: 255 TTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADK 314
G + L VL VL F+ P+ I +K
Sbjct: 164 MAY------GLKCRGLDVLVVEMAPQVLPRFL--------------DPDMAEIVQKYLEK 203
Query: 315 NSDKYILE--LQPAIKG-------LESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPL 365
K +L L+ + ++ ++++ D+V+ G +P + + ++ +
Sbjct: 204 EGIKVMLSKPLEKIVGKEKVEAVYVDGKLYDVDMVIMATGVRPNIELAKKAGCKIGKFAI 263
Query: 366 NARGQAETDETLCVKGHPRIFALGDSSALRD--SSGRPLPATAQVAFQQADFAGWNLWAA 423
+ +T P I+A+GD + D + + L A +Q AG N+ A
Sbjct: 264 EVNEKMQTS-------IPNIYAVGDCVEVIDFITGEKTLSPFGTAAVRQGKVAGKNI-AG 315
Query: 424 INDR--PLLPFRFQNLGEMMILGRNDAAVSPSF 454
+ + P+L +G++ I G A S +
Sbjct: 316 VEAKFYPVLNSAVSKIGDLEIGGTGLTAFSANL 348
>sp|Q54NS8|AIFB_DICDI Apoptosis-inducing factor homolog B OS=Dictyostelium discoideum
GN=aifB PE=3 SV=1
Length = 387
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 136/346 (39%), Gaps = 86/346 (24%)
Query: 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAW 137
+K R+ I+GGG+GG A +L D K V +V++ + F G V A
Sbjct: 4 EKKRVLIIGGGYGGCEVAKQL-------DSKFNVTVVERKQTFFHS-------VGSVRAV 49
Query: 138 EIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVL--------LESGLI 189
+ P K+ P D L NG GTV+ LE G
Sbjct: 50 -VEPELVK--------------KIYIPYDKLLKNGKFIF---GTVIEISPTLAKLEDGQE 91
Query: 190 VEYDWLVLSLGAEPKLDVVP--------GAAEFAFPFSTLEDACRVDRKL---------S 232
+ +D+LV++ G+ + P ++E F + + +
Sbjct: 92 LTFDYLVIATGSN---SLAPFKAPLEKKSSSEILNYFQNFSQQIKQAKSILIVGGGAVAC 148
Query: 233 ELERRNFER--LEEKGIVQAINVETT----ICPTGTPGNREAALKVLSARKVQLVLGYFV 286
EL E+ +++ +V+ I + + + P K + R V+++L
Sbjct: 149 ELVSEIVEKYPVKDSELVKKITIVHSGSKLVNPKMNDKFTNVVSKAMKKRNVEVILN--- 205
Query: 287 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGS 346
I E +A++ S PNI +S Y E KG+ Q ADL++WTVG
Sbjct: 206 DRITMPDEIKANLLNQTS---PNIQI--SSQNYTTE-----KGVPIQ---ADLIIWTVGI 252
Query: 347 KPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSS 392
K + E + ++ +N GQ + + + V+G+ +FA+GD +
Sbjct: 253 K---TNSESYQSHFSNV-INESGQLKVNLSCQVQGYNNVFAIGDCT 294
>sp|Q94BV7|NDB2_ARATH NAD(P)H dehydrogenase B2, mitochondrial OS=Arabidopsis thaliana
GN=NDB2 PE=1 SV=1
Length = 582
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 162/410 (39%), Gaps = 90/410 (21%)
Query: 44 FISFAASNSS-GRNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLV 102
I+++ +N+S G NG VV + KK ++ +LG G+ G T+ L++L
Sbjct: 34 LIAYSEANASYGANGGAVVET------------GTKKKKVVLLGTGWAG--TSF-LKNL- 77
Query: 103 WQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADL-LANTGVQFFKDRV-- 159
++ + +V ++ F F P+L + G V+A + ++ N + +
Sbjct: 78 --NNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARSVVEPIRNIGRKNVDTSYLEAECFK 135
Query: 160 ------KLLCPSDH-LGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA 212
K+ C S L NG + V+YD+LV++ GA+ +PG
Sbjct: 136 IDPASKKVYCRSKQGLSSNGKKEFS------------VDYDYLVIATGAQSNTFNIPGVE 183
Query: 213 EFAFPFSTLEDACRVDR------------KLSELERR---NFERLEEKGIVQAINVE--- 254
E +EDA R+ + +LS+ ER+ +F + E
Sbjct: 184 ENCHFLKEVEDAQRIRKTVIDSFEKASLPELSDEERKRILHFVVVGGGPTGVEFAAELHD 243
Query: 255 ------TTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIP 308
++ P + ++++ +L F +R+ EF A K G
Sbjct: 244 FVTEDLVSLYPRA-----KGSVRITLLEAADHILTMF---DKRITEF-AEEKFSRDGIDV 294
Query: 309 NIAA--DKNSDKYILELQPAIKGLESQIFEADLVLWT--VGSKPLLPHVEPPNNRLHDLP 364
+ + K ++K ++ KG E +++W+ +G++P++ + + +
Sbjct: 295 KLGSMVTKVNEK---DISAKTKGGEVSSIPYGMIVWSTGIGTRPVI------KDFMKQIG 345
Query: 365 LNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQAD 414
R TDE L V+G I+ALGD + + R + F +AD
Sbjct: 346 QGNRRALATDEWLRVEGTDNIYALGDCATINQ---RKVMEDVSAIFSKAD 392
>sp|O07220|Y1812_MYCTU NADH dehydrogenase-like protein Rv1812c/MT1860 OS=Mycobacterium
tuberculosis GN=Rv1812c PE=2 SV=1
Length = 400
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 96/262 (36%), Gaps = 19/262 (7%)
Query: 179 GGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRN 238
G V +G YD LVL+ G+ +PG AEF F T + A R+ + L L
Sbjct: 86 GRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAEFGFDVDTYDGAVRLQQHLQGLAGGP 145
Query: 239 FERLEEKGIVQAINVETTICPTGTPGNREAALKV---LSARKVQLVLGYFVRCIRRVGEF 295
+V + PG A ++ R V + FV +
Sbjct: 146 LTSAAATVVVVGAGLTGIETACELPGRLHALFARGDGVTPRVVLIDHNPFVGS-----DM 200
Query: 296 EASVKQPESGAIPNIAADKNSDKYILELQPAIKGLES-QIFEADLVLWTVGSKP--LLPH 352
S + A+ + + + + + P L S + A V+W G + L
Sbjct: 201 GLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGERLAAATVVWCAGMRASRLTEQ 260
Query: 353 VEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQ 412
+ +RL G+ + D+ L V G P +FA GD +A R + Q
Sbjct: 261 LPVARDRL--------GRLQVDDYLRVIGVPAMFAAGDVAAARMDDEHLSVMSCQHGRPM 312
Query: 413 ADFAGWNLWAAINDRPLLPFRF 434
+AG N+ + D+PLL R
Sbjct: 313 GRYAGCNVINDLFDQPLLALRI 334
>sp|P33009|TERPA_PSESP Terpredoxin reductase OS=Pseudomonas sp. GN=terPA PE=4 SV=1
Length = 409
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 98/252 (38%), Gaps = 43/252 (17%)
Query: 192 YDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFERLEEKGIVQAI 251
YD L+L+ G+ P+ G A+ S +DA R+ ++L E R + G +
Sbjct: 102 YDHLILATGSHPRFMATLGQADNLCYLSDWDDAGRIRQQLGEASR----IVVLGGGFIGL 157
Query: 252 NVETTICPTGTPGNR-EAALKVLSARKVQLVLGYFVRCIR-------RVGEFEASVKQPE 303
+ ++ C G E A ++LS R V F+ I R+GE V++
Sbjct: 158 EIASSACKMGKHVTVIERAPRLLS-RVVSEAFATFIGDIHLGNGIELRLGEEVREVRRCT 216
Query: 304 SGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDL 363
SG D L + Q+ E D+++ VGS+P +
Sbjct: 217 SGV--------RVDAVFLS--------DGQLLECDMLVIGVGSEPRMELATAAG------ 254
Query: 364 PLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLP--ATAQVAFQQADFAGWNLW 421
L DE C P I A+GD A+ S G LP + Q A +QA
Sbjct: 255 -LACASGVLVDEH-CHTSDPFISAIGDCVAVCPSPGHQLPRRESVQNATEQARLVA---- 308
Query: 422 AAINDRPLLPFR 433
A ++ RP+ P +
Sbjct: 309 ARLSGRPVPPVQ 320
>sp|Q8BUE4|AIFM2_MOUSE Apoptosis-inducing factor 2 OS=Mus musculus GN=Aifm2 PE=2 SV=1
Length = 373
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 365 LNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAI 424
L + G + +E L V+G+ I+A+GD + ++ P A A A+ A N+ ++
Sbjct: 260 LASNGALKVNEFLQVEGYSNIYAIGDCADTKE------PKMAYHAGLHANVAVANIVNSM 313
Query: 425 NDRPLLPFRFQNLGEMMILGRND 447
RPL ++ L ++ +GRND
Sbjct: 314 KQRPLKAYKPGALTFLLSMGRND 336
>sp|Q9R112|SQRD_MOUSE Sulfide:quinone oxidoreductase, mitochondrial OS=Mus musculus
GN=Sqrdl PE=2 SV=3
Length = 450
Score = 38.9 bits (89), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 150/368 (40%), Gaps = 53/368 (14%)
Query: 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
K + +LGGG GG+ A R++ V ++ V +V+ SER ++P ++ L+
Sbjct: 41 KNHYEVLVLGGGAGGITMATRMKRRVGAEN----VAIVEPSERHFYQP-IWTLVGAGAKE 95
Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196
++ R + +GVQ+ +DRV L P ++ + +SG + Y +L+
Sbjct: 96 LSLSVRSTLSVIPSGVQWIQDRVAELNPDEN-------------CIRTDSGKEISYRYLI 142
Query: 197 LSLGAEPKLDVVPGAAE-FAFPFSTLEDACRVDRKLSELERRNFERLEEKGIVQAINVET 255
++LG + + + G E FA+P + K E + + +E +
Sbjct: 143 IALGIQLDYEKIKGLPEGFAYP----KIGSNYSVKTVEKTWKALQGFKEGNALFTFPNTP 198
Query: 256 TICPTGTPGN----REAALKVLSAR-KVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNI 310
C G P EA + R K ++ + I V ++ ++++ I
Sbjct: 199 VKC-AGAPQKIMYLSEAYFRKTGKRPKANIIFNTALGTIFGVKKYADALQE----IIRER 253
Query: 311 AADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP----HVEPPN---NRLHDL 363
N ++E++P + +FE +L G ++P HV PP + L
Sbjct: 254 DVSVNYKHNLIEVRP---DKQEAVFE---ILDKPGETHVIPYEMLHVTPPMSAPDVLKRS 307
Query: 364 PL-NARGQAETD-ETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLW 421
P+ ++ G + D ETL K +P +F +GD + L S A VA Q
Sbjct: 308 PVADSAGWVDVDKETLQHKKYPNVFGIGDCTNLPTSK-----TAAAVAAQSGILDRTMCL 362
Query: 422 AAINDRPL 429
N RP+
Sbjct: 363 IMKNQRPI 370
>sp|Q54DK1|SQRD_DICDI Sulfide:quinone oxidoreductase, mitochondrial OS=Dictyostelium
discoideum GN=sqrdl PE=3 SV=1
Length = 452
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 21/151 (13%)
Query: 67 SASQTYTWPDKKK----PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122
SASQ + +K+K +I I+GGG GGL A +LE + K +++V+ SE+ +
Sbjct: 28 SASQLGSEKEKRKLKNVTKIVIVGGGAGGLSVASQLEH---KFKNKGDIVIVEPSEKHYY 84
Query: 123 KPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTV 182
+P L+ L+ G + + + + + G + KD V + P +++ V
Sbjct: 85 QP-LWTLVGGGIFSRKDSEKDEKDFIPKGATWVKDSVTVFKPEENI-------------V 130
Query: 183 LLESGLIVEYDWLVLSLGAEPKLDVVPGAAE 213
L + G ++YD+LV+S G E D V G E
Sbjct: 131 LTKDGKEIDYDYLVVSTGLELYWDRVKGLKE 161
>sp|P37061|NAOX_ENTFA NADH oxidase OS=Enterococcus faecalis (strain ATCC 700802 / V583)
GN=nox PE=1 SV=1
Length = 446
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 309 NIAADKNSDKYILELQPAIKGL--ESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN 366
N+A +N +++ + Q + + SQ FEAD+V+ VG + P+ E +++ LP
Sbjct: 205 NLALGENVQQFVADEQGKVAKVITPSQEFEADMVIMCVGFR---PNTELLKDKVDMLP-- 259
Query: 367 ARGQAETDETLCVKGHPRIFALGDSSALR--DSSGRPLPATAQVAFQQADFAGWNL 420
G E +E + +P IFA GDS+ + S + A A +Q G NL
Sbjct: 260 -NGAIEVNEYMQT-SNPDIFAAGDSAVVHYNPSQTKNYIPLATNAVRQGMLVGRNL 313
>sp|F2Z699|NDH2_YARLI External alternative NADH-ubiquinone oxidoreductase, mitochondrial
OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=NDH2
PE=1 SV=1
Length = 582
Score = 37.0 bits (84), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 14/170 (8%)
Query: 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVD 135
D K + +LG G+G + +L D V++V F+F P+L +G ++
Sbjct: 109 DPSKKTLVVLGSGWGSVSFLKKL------DTSNYNVIVVSPRNYFLFTPLLPSCPTGTIE 162
Query: 136 AWEIAPRFADLLANTGV--QFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEY 192
I ++ + Q+ + D K+ + + ++ V+ E + +
Sbjct: 163 HRSIMEPIRGIIRHKQAECQYLEADATKIDHEKRIVTIRSAVSENSKEEVIKE----IPF 218
Query: 193 DWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSE-LERRNFER 241
D+LV+ +GA +PG E A + DA ++ R L + +E+ FE+
Sbjct: 219 DYLVVGVGAMSSTFGIPGVQENACFLKEIPDAQQIRRTLMDCIEKAQFEK 268
>sp|Q6GLW8|AIFM2_XENLA Apoptosis-inducing factor 2 OS=Xenopus laevis GN=aifm2 PE=2 SV=1
Length = 374
Score = 35.8 bits (81), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 78/188 (41%), Gaps = 37/188 (19%)
Query: 263 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILE 322
P R ++L + V+L+L V + +V PN+A + +E
Sbjct: 185 PSVRRTVKEILLRKGVRLILAQKVTNLDQV--------------TPNVAQEN------ME 224
Query: 323 LQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNR--LHDLPLNARGQAETDETLCVK 380
LQ +S++ DLVL +G K V + R L D + G ++ L V+
Sbjct: 225 LQL---DKDSEVVNCDLVLCCIGLK-----VSSSSYRSALGD-KMAEDGSLIVNDYLQVQ 275
Query: 381 GHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEM 440
GH ++A+GD + + + P A A A A N+ ++ + L + L +
Sbjct: 276 GHENVYAVGDCAYINE------PKMAYYAGIHARVAATNVRNSLIGKSLKSYIPGALSML 329
Query: 441 MILGRNDA 448
+ +GRND
Sbjct: 330 LSMGRNDG 337
>sp|Q54NS9|AIFA_DICDI Apoptosis-inducing factor homolog A OS=Dictyostelium discoideum
GN=aifA PE=3 SV=1
Length = 408
Score = 35.8 bits (81), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 336 EADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGD 390
E+D V+WT+G K L N +++ N GQ + +++ V+G+ IFA+GD
Sbjct: 264 ESDFVIWTIGIK--LNSESYKTNFSNEI--NEIGQIKVNQSCQVQGYDNIFAIGD 314
>sp|B5FXE5|AIFM2_TAEGU Apoptosis-inducing factor 2 OS=Taeniopygia guttata GN=AIFM2 PE=2
SV=1
Length = 373
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 369 GQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 428
G + ++ L ++G+ I+A+GD + L++ P A A A+ N+ ++ +P
Sbjct: 263 GALKVNKHLQLEGYENIYAIGDCADLKE------PKMAYHAGLHANVVVTNIINSLTQKP 316
Query: 429 LLPFRFQNLGEMMILGRNDA 448
L + +L ++ +GRND
Sbjct: 317 LKTYEPGSLTFLLSMGRNDG 336
>sp|P16640|CAMA_PSEPU Putidaredoxin reductase OS=Pseudomonas putida GN=camA PE=1 SV=1
Length = 422
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 22/156 (14%)
Query: 82 ICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK--PMLYELLSGEVDAWEI 139
+ I+G G G+ A L + W+ + + LV + P+ L+G+ A +
Sbjct: 7 VVIVGTGLAGVEVAFGLRASGWEGN----IRLVGDATVIPHHLPPLSKAYLAGKATAESL 62
Query: 140 APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSL 199
R D A +Q LL + +N V+L G ++YD LVL+
Sbjct: 63 YLRTPDAYAAQNIQ-------LLGGTQVTAINRDRQ-----QVILSDGRALDYDRLVLAT 110
Query: 200 GAEPK-LDVVPGAAEFAFPF---STLEDACRVDRKL 231
G P+ L V GA A F TLEDA + R+L
Sbjct: 111 GGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQL 146
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,778,727
Number of Sequences: 539616
Number of extensions: 8384693
Number of successful extensions: 17559
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 17449
Number of HSP's gapped (non-prelim): 99
length of query: 513
length of database: 191,569,459
effective HSP length: 122
effective length of query: 391
effective length of database: 125,736,307
effective search space: 49162896037
effective search space used: 49162896037
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)