Query 010331
Match_columns 513
No_of_seqs 365 out of 3294
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 04:29:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010331.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010331hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g6h_A Rotenone-insensitive NA 100.0 3.9E-60 1.3E-64 499.8 31.3 375 77-496 40-494 (502)
2 3hyw_A Sulfide-quinone reducta 100.0 1.7E-50 6E-55 419.7 30.3 365 78-493 1-415 (430)
3 3sx6_A Sulfide-quinone reducta 100.0 2.2E-41 7.6E-46 352.1 29.6 350 79-477 4-402 (437)
4 3vrd_B FCCB subunit, flavocyto 100.0 5.8E-42 2E-46 352.7 20.2 302 79-439 2-338 (401)
5 3h28_A Sulfide-quinone reducta 100.0 1.3E-39 4.5E-44 338.1 27.8 351 79-483 2-396 (430)
6 4eqs_A Coenzyme A disulfide re 100.0 4.1E-37 1.4E-41 319.5 25.0 290 80-422 1-310 (437)
7 3klj_A NAD(FAD)-dependent dehy 100.0 1.8E-37 6E-42 316.7 21.1 296 78-447 8-321 (385)
8 3h8l_A NADH oxidase; membrane 100.0 4.1E-37 1.4E-41 317.4 21.9 296 80-436 2-348 (409)
9 3ef6_A Toluene 1,2-dioxygenase 100.0 2.4E-37 8.2E-42 319.0 20.1 313 79-446 2-334 (410)
10 3lxd_A FAD-dependent pyridine 100.0 2.2E-36 7.6E-41 312.4 24.1 315 78-446 8-346 (415)
11 1xhc_A NADH oxidase /nitrite r 100.0 2.1E-36 7.3E-41 307.1 23.3 300 79-448 8-325 (367)
12 3fg2_P Putative rubredoxin red 100.0 2.5E-36 8.7E-41 310.9 22.0 312 80-445 2-334 (404)
13 2gqw_A Ferredoxin reductase; f 100.0 1.9E-35 6.4E-40 304.6 19.4 306 78-445 6-333 (408)
14 1q1r_A Putidaredoxin reductase 100.0 1.3E-34 4.5E-39 300.3 19.3 313 78-444 3-342 (431)
15 3ntd_A FAD-dependent pyridine 100.0 7.4E-34 2.5E-38 305.2 24.8 311 80-423 2-338 (565)
16 3iwa_A FAD-dependent pyridine 100.0 3.9E-34 1.3E-38 300.5 19.5 292 79-422 3-328 (472)
17 2bc0_A NADH oxidase; flavoprot 100.0 9.1E-34 3.1E-38 298.9 21.9 292 78-422 34-360 (490)
18 3kd9_A Coenzyme A disulfide re 100.0 5.8E-34 2E-38 297.3 19.3 290 79-422 3-314 (449)
19 2cdu_A NADPH oxidase; flavoenz 100.0 1.1E-33 3.7E-38 295.5 21.1 289 80-422 1-316 (452)
20 3oc4_A Oxidoreductase, pyridin 100.0 7.1E-34 2.4E-38 296.8 19.3 292 80-423 3-314 (452)
21 3ics_A Coenzyme A-disulfide re 100.0 2.8E-33 9.4E-38 301.9 24.2 292 77-422 34-352 (588)
22 2v3a_A Rubredoxin reductase; a 100.0 2.8E-33 9.4E-38 286.3 21.1 285 79-422 4-305 (384)
23 3cgb_A Pyridine nucleotide-dis 100.0 1.3E-32 4.5E-37 289.3 24.3 291 79-422 36-352 (480)
24 1m6i_A Programmed cell death p 100.0 2E-33 6.8E-38 296.2 16.1 292 78-422 10-351 (493)
25 1nhp_A NADH peroxidase; oxidor 100.0 2.3E-32 8E-37 285.0 22.6 289 80-422 1-315 (447)
26 3f8d_A Thioredoxin reductase ( 100.0 2.5E-32 8.4E-37 271.6 17.5 290 78-429 14-321 (323)
27 3fbs_A Oxidoreductase; structu 100.0 4.2E-32 1.4E-36 266.8 18.1 274 79-428 2-295 (297)
28 1zmd_A Dihydrolipoyl dehydroge 100.0 8.1E-32 2.8E-36 283.0 19.2 284 79-422 6-344 (474)
29 1ebd_A E3BD, dihydrolipoamide 100.0 1.2E-31 4E-36 280.3 20.3 280 79-422 3-332 (455)
30 1zk7_A HGII, reductase, mercur 100.0 4.5E-31 1.6E-35 276.8 24.6 277 79-422 4-333 (467)
31 1xdi_A RV3303C-LPDA; reductase 100.0 1.5E-31 5.1E-36 282.7 20.1 287 79-422 2-341 (499)
32 3itj_A Thioredoxin reductase 1 100.0 9.6E-32 3.3E-36 269.2 17.3 288 76-427 19-337 (338)
33 1dxl_A Dihydrolipoamide dehydr 100.0 1.6E-31 5.3E-36 280.6 19.6 285 78-422 5-341 (470)
34 1onf_A GR, grase, glutathione 100.0 3.6E-31 1.2E-35 279.7 22.1 282 79-422 2-370 (500)
35 2qae_A Lipoamide, dihydrolipoy 100.0 1.2E-31 4.1E-36 281.2 18.3 283 79-422 2-339 (468)
36 2hqm_A GR, grase, glutathione 100.0 3.1E-31 1.1E-35 278.7 21.3 278 79-423 11-347 (479)
37 3l8k_A Dihydrolipoyl dehydroge 100.0 1.2E-31 3.9E-36 281.1 17.9 281 79-423 4-333 (466)
38 2zbw_A Thioredoxin reductase; 100.0 8.8E-31 3E-35 262.3 23.3 296 79-437 5-329 (335)
39 2q7v_A Thioredoxin reductase; 100.0 4.6E-31 1.6E-35 263.4 19.7 288 79-428 8-315 (325)
40 1fec_A Trypanothione reductase 100.0 1E-30 3.4E-35 275.5 22.3 278 79-422 3-350 (490)
41 1v59_A Dihydrolipoamide dehydr 100.0 5.5E-31 1.9E-35 277.0 20.2 282 79-422 5-349 (478)
42 2wpf_A Trypanothione reductase 100.0 4.9E-31 1.7E-35 278.1 19.9 276 79-422 7-354 (495)
43 1ges_A Glutathione reductase; 100.0 4.3E-31 1.5E-35 275.5 18.9 275 79-422 4-327 (450)
44 1mo9_A ORF3; nucleotide bindin 100.0 2.7E-31 9.2E-36 282.1 17.4 302 78-447 42-404 (523)
45 2a8x_A Dihydrolipoyl dehydroge 100.0 2.8E-31 9.4E-36 278.2 16.3 279 80-422 4-333 (464)
46 3r9u_A Thioredoxin reductase; 100.0 6.9E-31 2.4E-35 260.3 18.2 289 78-427 3-314 (315)
47 3dk9_A Grase, GR, glutathione 100.0 7.7E-31 2.6E-35 275.9 19.6 285 78-423 19-356 (478)
48 2r9z_A Glutathione amide reduc 100.0 1.3E-30 4.4E-35 272.8 20.8 274 79-422 4-326 (463)
49 1ojt_A Surface protein; redox- 100.0 6.5E-31 2.2E-35 276.6 17.8 281 79-422 6-348 (482)
50 3urh_A Dihydrolipoyl dehydroge 100.0 1.5E-30 5.2E-35 274.5 20.6 285 78-422 24-362 (491)
51 4a5l_A Thioredoxin reductase; 100.0 1E-30 3.5E-35 259.3 17.6 286 79-425 4-312 (314)
52 3lzw_A Ferredoxin--NADP reduct 100.0 4.8E-30 1.6E-34 256.2 22.5 283 79-428 7-318 (332)
53 1fl2_A Alkyl hydroperoxide red 100.0 2.3E-30 7.9E-35 256.4 19.8 288 80-428 2-308 (310)
54 2q0l_A TRXR, thioredoxin reduc 100.0 2.2E-30 7.7E-35 256.6 19.0 286 80-426 2-310 (311)
55 3qfa_A Thioredoxin reductase 1 100.0 4E-30 1.4E-34 272.7 22.0 288 78-422 31-379 (519)
56 4dna_A Probable glutathione re 100.0 2.1E-30 7.1E-35 271.4 19.2 274 79-422 5-330 (463)
57 3cty_A Thioredoxin reductase; 100.0 3.7E-30 1.3E-34 256.2 19.8 286 79-427 16-318 (319)
58 4fk1_A Putative thioredoxin re 100.0 1E-30 3.5E-35 258.5 15.6 279 79-426 6-301 (304)
59 3ab1_A Ferredoxin--NADP reduct 100.0 7.5E-30 2.6E-34 258.4 21.7 295 79-435 14-338 (360)
60 1trb_A Thioredoxin reductase; 100.0 2.8E-30 9.4E-35 256.9 18.0 290 79-428 5-317 (320)
61 2yqu_A 2-oxoglutarate dehydrog 100.0 1.7E-30 5.7E-35 271.6 16.9 277 80-422 2-326 (455)
62 2a87_A TRXR, TR, thioredoxin r 100.0 1.6E-30 5.3E-35 260.8 15.9 287 78-428 13-319 (335)
63 3o0h_A Glutathione reductase; 100.0 1.6E-29 5.5E-34 266.1 24.1 279 79-423 26-351 (484)
64 2eq6_A Pyruvate dehydrogenase 100.0 1.6E-30 5.3E-35 272.3 16.2 278 79-422 6-333 (464)
65 3lad_A Dihydrolipoamide dehydr 100.0 4.8E-30 1.6E-34 269.7 19.9 282 78-422 2-342 (476)
66 1vdc_A NTR, NADPH dependent th 100.0 2.8E-30 9.6E-35 258.4 17.2 293 79-430 8-328 (333)
67 3dgz_A Thioredoxin reductase 2 100.0 3E-30 1E-34 272.0 18.2 285 78-422 5-351 (488)
68 3dgh_A TRXR-1, thioredoxin red 100.0 6.5E-30 2.2E-34 269.1 19.7 284 78-422 8-351 (483)
69 4gcm_A TRXR, thioredoxin reduc 100.0 9.8E-30 3.3E-34 252.3 18.8 282 78-425 5-306 (312)
70 1lvl_A Dihydrolipoamide dehydr 100.0 3.5E-29 1.2E-33 261.6 16.6 272 79-422 5-329 (458)
71 3ic9_A Dihydrolipoamide dehydr 100.0 5.5E-29 1.9E-33 262.3 15.6 277 79-423 8-338 (492)
72 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.7E-28 6E-33 260.1 16.9 285 78-426 211-517 (521)
73 2x8g_A Thioredoxin glutathione 100.0 4.5E-28 1.5E-32 261.7 18.6 287 77-423 105-459 (598)
74 4a9w_A Monooxygenase; baeyer-v 100.0 4E-28 1.4E-32 244.5 16.4 274 79-426 3-353 (357)
75 4b1b_A TRXR, thioredoxin reduc 99.9 7.7E-28 2.6E-32 254.4 13.5 282 79-423 42-384 (542)
76 2vdc_G Glutamate synthase [NAD 99.9 5.1E-28 1.7E-32 251.6 11.4 296 77-430 120-449 (456)
77 3k30_A Histamine dehydrogenase 99.9 1.4E-28 4.7E-33 269.5 7.5 326 20-436 331-686 (690)
78 3d1c_A Flavin-containing putat 99.9 2.2E-27 7.4E-32 240.8 14.9 281 79-427 4-341 (369)
79 1o94_A Tmadh, trimethylamine d 99.9 3E-27 1E-31 260.0 6.5 336 19-434 327-708 (729)
80 1lqt_A FPRA; NADP+ derivative, 99.9 6.9E-26 2.4E-30 235.8 16.0 289 79-427 3-389 (456)
81 3s5w_A L-ornithine 5-monooxyge 99.9 3.7E-25 1.3E-29 231.6 15.4 310 79-433 30-457 (463)
82 1gte_A Dihydropyrimidine dehyd 99.9 1.1E-25 3.7E-30 255.8 12.0 301 78-435 186-526 (1025)
83 1cjc_A Protein (adrenodoxin re 99.9 1.9E-25 6.6E-30 232.7 12.7 289 79-428 6-398 (460)
84 1y56_A Hypothetical protein PH 99.9 1.7E-25 5.7E-30 235.7 9.3 262 79-424 108-376 (493)
85 1ps9_A 2,4-dienoyl-COA reducta 99.9 4.6E-25 1.6E-29 240.9 11.5 303 20-420 317-671 (671)
86 2xve_A Flavin-containing monoo 99.9 5.6E-24 1.9E-28 222.3 16.1 263 79-423 2-339 (464)
87 2gag_A Heterotetrameric sarcos 99.9 4.8E-24 1.6E-28 240.7 13.2 285 79-426 128-445 (965)
88 2gv8_A Monooxygenase; FMO, FAD 99.9 4.9E-22 1.7E-26 206.9 13.5 259 78-423 5-360 (447)
89 3gwf_A Cyclohexanone monooxyge 99.8 4.8E-22 1.6E-26 211.0 6.3 120 79-213 8-159 (540)
90 2ywl_A Thioredoxin reductase r 99.8 6.2E-20 2.1E-24 166.6 17.2 122 265-433 58-179 (180)
91 3uox_A Otemo; baeyer-villiger 99.8 5.3E-20 1.8E-24 195.5 7.3 121 78-213 8-159 (545)
92 4ap3_A Steroid monooxygenase; 99.8 2.3E-18 7.7E-23 183.1 17.3 121 78-213 20-171 (549)
93 1w4x_A Phenylacetone monooxyge 99.8 1.3E-18 4.4E-23 185.3 14.9 82 331-426 375-467 (542)
94 2cul_A Glucose-inhibited divis 99.6 4.1E-15 1.4E-19 140.5 10.5 116 79-211 3-133 (232)
95 2e5v_A L-aspartate oxidase; ar 99.5 1.5E-14 5.2E-19 151.0 3.4 79 337-425 291-369 (472)
96 4b63_A L-ornithine N5 monooxyg 99.4 9.6E-12 3.3E-16 130.8 21.2 82 331-418 392-481 (501)
97 3k7m_X 6-hydroxy-L-nicotine ox 99.1 5.4E-11 1.8E-15 122.6 3.8 96 262-392 203-306 (431)
98 3fpz_A Thiazole biosynthetic e 98.9 7.7E-12 2.6E-16 124.2 -9.9 77 334-425 249-325 (326)
99 3ces_A MNMG, tRNA uridine 5-ca 98.7 2.3E-08 7.8E-13 106.5 9.2 118 79-212 28-190 (651)
100 2zxi_A TRNA uridine 5-carboxym 98.7 2.8E-08 9.5E-13 105.4 9.7 118 79-212 27-189 (637)
101 3v76_A Flavoprotein; structura 98.7 1.7E-08 5.7E-13 103.4 7.8 108 78-203 26-187 (417)
102 2bry_A NEDD9 interacting prote 98.7 2.5E-08 8.6E-13 104.6 9.2 120 77-210 90-237 (497)
103 3alj_A 2-methyl-3-hydroxypyrid 98.7 2.9E-08 1E-12 100.3 9.0 105 79-203 11-160 (379)
104 4dgk_A Phytoene dehydrogenase; 98.7 1.3E-07 4.6E-12 99.1 13.9 57 263-348 221-278 (501)
105 3nlc_A Uncharacterized protein 98.7 2.8E-08 9.5E-13 104.8 8.5 48 370-425 496-543 (549)
106 2gqf_A Hypothetical protein HI 98.7 3.5E-08 1.2E-12 100.5 8.8 46 373-421 353-399 (401)
107 1kf6_A Fumarate reductase flav 98.7 3.2E-08 1.1E-12 106.0 8.2 55 368-424 359-415 (602)
108 1rp0_A ARA6, thiazole biosynth 98.6 7.6E-08 2.6E-12 93.3 10.0 113 79-204 39-192 (284)
109 2x3n_A Probable FAD-dependent 98.6 6.6E-08 2.3E-12 98.3 9.6 110 79-203 6-166 (399)
110 3cp8_A TRNA uridine 5-carboxym 98.6 6E-08 2E-12 103.2 8.8 118 77-210 19-181 (641)
111 3nrn_A Uncharacterized protein 98.6 2.5E-07 8.4E-12 94.8 13.2 60 259-349 185-244 (421)
112 2i0z_A NAD(FAD)-utilizing dehy 98.6 9.2E-08 3.2E-12 98.9 8.7 111 77-203 24-191 (447)
113 1ryi_A Glycine oxidase; flavop 98.6 5E-08 1.7E-12 98.5 6.3 36 77-118 15-50 (382)
114 3cgv_A Geranylgeranyl reductas 98.5 4.5E-07 1.6E-11 91.8 12.5 35 79-119 4-38 (397)
115 3e1t_A Halogenase; flavoprotei 98.5 1.3E-07 4.6E-12 99.5 7.8 34 79-118 7-40 (512)
116 3rp8_A Flavoprotein monooxygen 98.5 1.9E-07 6.4E-12 95.3 8.4 37 77-119 21-57 (407)
117 1yvv_A Amine oxidase, flavin-c 98.5 3.7E-07 1.3E-11 90.2 10.2 34 79-118 2-35 (336)
118 3nix_A Flavoprotein/dehydrogen 98.5 1E-07 3.5E-12 97.6 6.3 110 79-203 5-166 (421)
119 2v3a_A Rubredoxin reductase; a 98.5 3.2E-07 1.1E-11 92.9 9.9 100 79-205 145-245 (384)
120 2xdo_A TETX2 protein; tetracyc 98.5 3.9E-07 1.3E-11 92.7 10.2 36 78-119 25-60 (398)
121 3dme_A Conserved exported prot 98.5 1.8E-07 6.3E-12 93.5 7.6 34 79-118 4-37 (369)
122 3i3l_A Alkylhalidase CMLS; fla 98.5 2.6E-07 9E-12 98.6 8.9 109 79-203 23-188 (591)
123 1nhp_A NADH peroxidase; oxidor 98.5 4.5E-07 1.5E-11 93.7 10.4 103 78-208 148-251 (447)
124 2yqu_A 2-oxoglutarate dehydrog 98.5 2.5E-07 8.4E-12 95.9 8.4 101 79-207 167-268 (455)
125 2gqw_A Ferredoxin reductase; f 98.4 4.2E-07 1.4E-11 92.8 9.5 95 79-204 145-240 (408)
126 1k0i_A P-hydroxybenzoate hydro 98.4 1.8E-07 6.2E-12 94.9 6.8 34 79-118 2-35 (394)
127 3fmw_A Oxygenase; mithramycin, 98.4 2.5E-07 8.7E-12 98.5 7.9 109 78-203 48-207 (570)
128 1s3e_A Amine oxidase [flavin-c 98.4 3.4E-06 1.2E-10 88.8 16.4 39 79-123 4-42 (520)
129 2vou_A 2,6-dihydroxypyridine h 98.4 3.8E-07 1.3E-11 92.7 8.7 35 79-119 5-39 (397)
130 1y56_B Sarcosine oxidase; dehy 98.4 3.1E-07 1E-11 92.7 8.0 34 79-118 5-38 (382)
131 3qj4_A Renalase; FAD/NAD(P)-bi 98.4 4E-07 1.4E-11 90.5 8.6 36 80-118 2-37 (342)
132 4gde_A UDP-galactopyranose mut 98.4 6.8E-07 2.3E-11 93.8 10.5 40 78-122 9-48 (513)
133 2uzz_A N-methyl-L-tryptophan o 98.4 1.8E-07 6.2E-12 93.9 5.7 34 79-118 2-35 (372)
134 3pl8_A Pyranose 2-oxidase; sub 98.4 8.6E-08 2.9E-12 103.1 3.4 37 79-121 46-82 (623)
135 3ef6_A Toluene 1,2-dioxygenase 98.4 3.6E-07 1.2E-11 93.4 7.9 100 79-205 143-243 (410)
136 3ka7_A Oxidoreductase; structu 98.4 6.8E-07 2.3E-11 91.5 10.0 58 262-349 195-253 (425)
137 3ps9_A TRNA 5-methylaminomethy 98.4 5.3E-07 1.8E-11 98.2 9.5 34 79-118 272-305 (676)
138 2gag_B Heterotetrameric sarcos 98.4 3.5E-07 1.2E-11 92.9 7.2 36 78-118 20-56 (405)
139 3dje_A Fructosyl amine: oxygen 98.4 5.7E-07 2E-11 92.5 8.7 34 79-118 6-40 (438)
140 4eqs_A Coenzyme A disulfide re 98.4 9.4E-07 3.2E-11 91.0 10.1 96 79-206 147-243 (437)
141 2eq6_A Pyruvate dehydrogenase 98.4 6.2E-07 2.1E-11 93.1 8.8 100 79-206 169-274 (464)
142 3nyc_A D-arginine dehydrogenas 98.4 1.8E-07 6.1E-12 94.2 4.2 34 78-118 8-41 (381)
143 2gf3_A MSOX, monomeric sarcosi 98.4 4.7E-07 1.6E-11 91.4 7.3 34 79-118 3-36 (389)
144 3lxd_A FAD-dependent pyridine 98.4 1.1E-06 3.7E-11 89.9 9.9 101 79-205 152-253 (415)
145 3nks_A Protoporphyrinogen oxid 98.3 2.6E-06 8.8E-11 88.6 12.8 38 79-122 2-41 (477)
146 1xhc_A NADH oxidase /nitrite r 98.3 6.7E-07 2.3E-11 89.9 8.1 92 80-205 144-236 (367)
147 1lvl_A Dihydrolipoamide dehydr 98.3 5.5E-07 1.9E-11 93.4 7.4 99 79-207 171-272 (458)
148 1ges_A Glutathione reductase; 98.3 9.8E-07 3.3E-11 91.3 9.2 101 79-206 167-268 (450)
149 3oz2_A Digeranylgeranylglycero 98.3 4.8E-07 1.7E-11 91.2 6.5 36 79-120 4-39 (397)
150 2bc0_A NADH oxidase; flavoprot 98.3 1.5E-06 5.1E-11 90.9 10.3 101 78-206 193-294 (490)
151 3ihg_A RDME; flavoenzyme, anth 98.3 6.6E-07 2.3E-11 94.7 7.6 35 78-118 4-38 (535)
152 2r9z_A Glutathione amide reduc 98.3 1.1E-06 3.9E-11 91.1 9.1 100 79-206 166-267 (463)
153 1y0p_A Fumarate reductase flav 98.3 9.7E-07 3.3E-11 94.2 8.8 35 79-119 126-160 (571)
154 3oc4_A Oxidoreductase, pyridin 98.3 3.8E-06 1.3E-10 86.9 13.0 102 79-208 147-249 (452)
155 3pvc_A TRNA 5-methylaminomethy 98.3 1.1E-06 3.7E-11 95.9 9.3 34 79-118 264-297 (689)
156 3fg2_P Putative rubredoxin red 98.3 1.4E-06 4.7E-11 88.8 8.9 101 79-205 142-243 (404)
157 2qa1_A PGAE, polyketide oxygen 98.3 1E-06 3.5E-11 92.3 8.2 110 77-203 9-165 (500)
158 1ebd_A E3BD, dihydrolipoamide 98.3 1.5E-06 5.1E-11 90.0 9.3 100 79-206 170-273 (455)
159 2qa2_A CABE, polyketide oxygen 98.3 1.3E-06 4.3E-11 91.6 8.7 110 77-203 10-166 (499)
160 1fec_A Trypanothione reductase 98.3 2.2E-06 7.5E-11 89.6 10.4 104 79-206 187-291 (490)
161 1onf_A GR, grase, glutathione 98.3 2.7E-06 9.2E-11 89.2 10.7 100 79-205 176-277 (500)
162 1qo8_A Flavocytochrome C3 fuma 98.3 1.1E-06 3.7E-11 93.7 7.7 36 78-119 120-155 (566)
163 1q1r_A Putidaredoxin reductase 98.3 1.7E-06 5.8E-11 89.0 8.8 100 79-204 149-251 (431)
164 2wpf_A Trypanothione reductase 98.3 2.4E-06 8E-11 89.5 10.0 103 79-205 191-294 (495)
165 3atr_A Conserved archaeal prot 98.3 1E-06 3.4E-11 91.3 7.0 35 79-119 6-40 (453)
166 2oln_A NIKD protein; flavoprot 98.3 9.9E-07 3.4E-11 89.5 6.9 34 79-118 4-37 (397)
167 2weu_A Tryptophan 5-halogenase 98.3 1.6E-06 5.5E-11 91.2 8.7 37 79-118 2-38 (511)
168 4hb9_A Similarities with proba 98.3 2.4E-06 8.2E-11 86.6 9.7 34 80-119 2-35 (412)
169 1ojt_A Surface protein; redox- 98.3 1.2E-06 4.1E-11 91.4 7.6 99 79-205 185-288 (482)
170 1v59_A Dihydrolipoamide dehydr 98.3 2E-06 6.7E-11 89.7 9.2 100 79-206 183-290 (478)
171 2gmh_A Electron transfer flavo 98.3 1.4E-06 4.6E-11 93.2 8.1 43 77-119 33-75 (584)
172 1zmd_A Dihydrolipoyl dehydroge 98.2 3.2E-06 1.1E-10 87.9 10.5 102 79-206 178-285 (474)
173 3fbs_A Oxidoreductase; structu 98.2 2.4E-06 8.2E-11 82.6 8.9 88 79-205 141-228 (297)
174 2hqm_A GR, grase, glutathione 98.2 1.9E-06 6.6E-11 89.8 8.8 101 79-205 185-287 (479)
175 3iwa_A FAD-dependent pyridine 98.2 2.2E-06 7.7E-11 89.1 9.2 100 79-205 159-260 (472)
176 2cdu_A NADPH oxidase; flavoenz 98.2 2.5E-06 8.7E-11 88.2 9.5 101 79-206 149-250 (452)
177 2aqj_A Tryptophan halogenase, 98.2 3.1E-06 1.1E-10 89.5 10.2 37 79-118 5-41 (538)
178 1m6i_A Programmed cell death p 98.2 1.7E-06 5.9E-11 90.5 8.0 104 79-205 180-284 (493)
179 3kkj_A Amine oxidase, flavin-c 98.2 9.2E-07 3.1E-11 83.6 5.0 37 78-120 1-37 (336)
180 3ics_A Coenzyme A-disulfide re 98.2 2.6E-06 8.9E-11 91.2 8.7 97 79-205 187-284 (588)
181 3c96_A Flavin-containing monoo 98.2 1.7E-06 5.9E-11 88.2 6.9 35 79-119 4-39 (410)
182 1mo9_A ORF3; nucleotide bindin 98.2 3.4E-06 1.2E-10 88.9 9.3 102 80-205 215-318 (523)
183 3c4n_A Uncharacterized protein 98.2 1.3E-06 4.5E-11 89.0 5.9 36 79-118 36-71 (405)
184 3cgb_A Pyridine nucleotide-dis 98.2 2.2E-06 7.5E-11 89.4 7.5 100 78-206 185-285 (480)
185 3kd9_A Coenzyme A disulfide re 98.2 5.4E-06 1.9E-10 85.6 10.5 98 79-205 148-246 (449)
186 4b1b_A TRXR, thioredoxin reduc 98.2 3.5E-06 1.2E-10 88.8 9.1 100 78-206 222-322 (542)
187 3ntd_A FAD-dependent pyridine 98.2 4.5E-06 1.5E-10 88.8 10.1 110 79-205 151-269 (565)
188 2qae_A Lipoamide, dihydrolipoy 98.1 5.2E-06 1.8E-10 86.2 9.5 100 79-206 174-279 (468)
189 2a8x_A Dihydrolipoyl dehydroge 98.1 4.1E-06 1.4E-10 86.9 8.6 100 79-206 171-274 (464)
190 1zk7_A HGII, reductase, mercur 98.1 3.8E-06 1.3E-10 87.2 8.1 98 79-206 176-274 (467)
191 1dxl_A Dihydrolipoamide dehydr 98.1 3.5E-06 1.2E-10 87.5 7.8 100 79-206 177-282 (470)
192 1xdi_A RV3303C-LPDA; reductase 98.1 4.1E-06 1.4E-10 87.8 8.3 100 79-206 182-282 (499)
193 3jsk_A Cypbp37 protein; octame 98.1 7.1E-06 2.4E-10 80.8 9.2 37 79-119 79-115 (344)
194 3lad_A Dihydrolipoamide dehydr 98.1 9.2E-06 3.1E-10 84.5 10.6 100 79-206 180-283 (476)
195 3o0h_A Glutathione reductase; 98.1 5.6E-06 1.9E-10 86.4 8.9 100 79-206 191-291 (484)
196 2e4g_A Tryptophan halogenase; 98.1 5.9E-06 2E-10 87.6 9.0 37 79-118 25-61 (550)
197 2pyx_A Tryptophan halogenase; 98.1 1E-05 3.6E-10 85.3 10.8 40 79-118 7-52 (526)
198 2yg5_A Putrescine oxidase; oxi 98.1 2.4E-05 8.3E-10 80.6 13.2 38 79-122 5-42 (453)
199 1trb_A Thioredoxin reductase; 98.1 9.3E-06 3.2E-10 79.4 9.5 99 79-206 145-250 (320)
200 3ic9_A Dihydrolipoamide dehydr 98.1 9.9E-06 3.4E-10 84.7 10.0 100 79-207 174-278 (492)
201 2zbw_A Thioredoxin reductase; 98.1 7.5E-06 2.6E-10 80.7 8.3 97 79-205 152-254 (335)
202 3urh_A Dihydrolipoyl dehydroge 98.0 8.1E-06 2.8E-10 85.3 8.9 100 79-206 198-303 (491)
203 4dna_A Probable glutathione re 98.0 1.5E-05 5E-10 82.7 10.2 100 79-206 170-271 (463)
204 2gv8_A Monooxygenase; FMO, FAD 98.0 1.8E-05 6.2E-10 81.6 10.8 83 79-207 212-296 (447)
205 2dkh_A 3-hydroxybenzoate hydro 98.0 5.7E-06 1.9E-10 89.4 6.9 34 79-118 32-66 (639)
206 2q7v_A Thioredoxin reductase; 98.0 2.1E-05 7.2E-10 77.2 10.3 94 79-205 152-251 (325)
207 2qcu_A Aerobic glycerol-3-phos 98.0 7.9E-06 2.7E-10 85.6 7.3 34 79-118 3-36 (501)
208 3d1c_A Flavin-containing putat 98.0 1E-05 3.5E-10 80.8 7.9 106 79-205 166-274 (369)
209 1pj5_A N,N-dimethylglycine oxi 98.0 7.5E-06 2.6E-10 91.3 7.5 34 79-118 4-38 (830)
210 1d4d_A Flavocytochrome C fumar 98.0 1.4E-05 4.8E-10 85.1 9.3 35 79-119 126-160 (572)
211 2r0c_A REBC; flavin adenine di 98.0 7.7E-06 2.6E-10 86.7 7.2 34 79-118 26-59 (549)
212 3da1_A Glycerol-3-phosphate de 98.0 5.7E-05 1.9E-09 80.2 13.9 34 79-118 18-51 (561)
213 4at0_A 3-ketosteroid-delta4-5a 98.0 1.5E-05 5.1E-10 83.7 9.2 36 78-119 40-75 (510)
214 3dk9_A Grase, GR, glutathione 98.0 1.9E-05 6.5E-10 82.2 9.8 102 79-206 187-296 (478)
215 3gwf_A Cyclohexanone monooxyge 97.9 2.6E-05 9E-10 82.3 10.5 36 78-119 177-212 (540)
216 3f8d_A Thioredoxin reductase ( 97.9 2.7E-05 9.2E-10 76.0 9.7 93 79-204 154-252 (323)
217 2a87_A TRXR, TR, thioredoxin r 97.9 3.2E-05 1.1E-09 76.3 10.3 96 79-207 155-256 (335)
218 3itj_A Thioredoxin reductase 1 97.9 2.2E-05 7.6E-10 77.2 9.1 94 79-205 173-273 (338)
219 3axb_A Putative oxidoreductase 97.9 1.3E-05 4.3E-10 82.7 7.4 33 79-116 23-55 (448)
220 3ab1_A Ferredoxin--NADP reduct 97.9 2.1E-05 7E-10 78.5 8.7 98 79-205 163-265 (360)
221 2xve_A Flavin-containing monoo 97.9 2.5E-05 8.7E-10 80.9 9.6 84 79-207 197-280 (464)
222 1vdc_A NTR, NADPH dependent th 97.9 3.9E-05 1.3E-09 75.5 10.4 97 79-206 159-262 (333)
223 3s5w_A L-ornithine 5-monooxyge 97.9 1.6E-05 5.6E-10 82.2 7.9 38 79-120 227-264 (463)
224 2q0l_A TRXR, thioredoxin reduc 97.9 2.5E-05 8.7E-10 76.0 8.7 95 79-205 143-243 (311)
225 3dgh_A TRXR-1, thioredoxin red 97.9 2.5E-05 8.4E-10 81.4 8.9 100 79-206 187-292 (483)
226 2gjc_A Thiazole biosynthetic e 97.9 3.8E-05 1.3E-09 75.1 9.1 38 79-120 65-102 (326)
227 3cty_A Thioredoxin reductase; 97.8 3.1E-05 1E-09 75.8 8.4 94 79-205 155-254 (319)
228 1fl2_A Alkyl hydroperoxide red 97.8 4.6E-05 1.6E-09 74.1 9.5 94 79-205 144-244 (310)
229 3k30_A Histamine dehydrogenase 97.8 4.4E-05 1.5E-09 83.2 10.3 97 79-204 523-625 (690)
230 3dgz_A Thioredoxin reductase 2 97.8 3.5E-05 1.2E-09 80.4 9.1 100 79-206 185-290 (488)
231 4g6h_A Rotenone-insensitive NA 97.8 2.7E-05 9.3E-10 81.4 8.2 103 80-204 218-333 (502)
232 3r9u_A Thioredoxin reductase; 97.8 3.7E-05 1.3E-09 74.7 8.6 98 79-206 147-247 (315)
233 3uox_A Otemo; baeyer-villiger 97.8 7.6E-05 2.6E-09 78.9 11.2 36 78-119 184-219 (545)
234 3klj_A NAD(FAD)-dependent dehy 97.8 5.7E-06 1.9E-10 83.6 2.0 87 79-205 146-233 (385)
235 2wdq_A Succinate dehydrogenase 97.8 4.4E-05 1.5E-09 81.5 8.8 34 79-118 7-40 (588)
236 2h88_A Succinate dehydrogenase 97.8 9.5E-05 3.2E-09 79.2 11.3 34 79-118 18-51 (621)
237 4a5l_A Thioredoxin reductase; 97.8 9.7E-05 3.3E-09 71.9 10.4 101 79-206 152-253 (314)
238 4gut_A Lysine-specific histone 97.7 2.1E-05 7.3E-10 86.3 5.8 37 79-121 336-372 (776)
239 3lzw_A Ferredoxin--NADP reduct 97.7 7.5E-05 2.6E-09 73.1 9.3 93 79-205 154-252 (332)
240 3l8k_A Dihydrolipoyl dehydroge 97.7 5.7E-05 1.9E-09 78.3 8.6 98 79-206 172-275 (466)
241 3qfa_A Thioredoxin reductase 1 97.7 7.6E-05 2.6E-09 78.5 9.6 105 79-206 210-318 (519)
242 1chu_A Protein (L-aspartate ox 97.7 4.8E-05 1.6E-09 80.3 8.1 56 368-424 354-410 (540)
243 3ihm_A Styrene monooxygenase A 97.6 3.2E-05 1.1E-09 79.4 5.0 37 76-118 19-55 (430)
244 4ap3_A Steroid monooxygenase; 97.6 0.0001 3.5E-09 78.0 8.8 36 78-119 190-225 (549)
245 2x8g_A Thioredoxin glutathione 97.6 0.00013 4.5E-09 78.1 9.2 104 79-205 286-397 (598)
246 4a9w_A Monooxygenase; baeyer-v 97.5 0.00021 7E-09 70.6 8.8 33 79-118 163-195 (357)
247 3i6d_A Protoporphyrinogen oxid 97.5 5.5E-05 1.9E-09 78.1 4.4 43 79-121 5-47 (470)
248 1pn0_A Phenol 2-monooxygenase; 97.5 9.1E-05 3.1E-09 80.2 6.3 34 79-118 8-46 (665)
249 1rp0_A ARA6, thiazole biosynth 97.5 0.00017 5.7E-09 69.5 7.2 137 268-427 124-277 (284)
250 2b9w_A Putative aminooxidase; 97.5 0.0001 3.5E-09 75.1 5.8 38 78-121 5-43 (424)
251 1ps9_A 2,4-dienoyl-COA reducta 97.4 0.00022 7.6E-09 77.3 8.6 103 79-205 494-630 (671)
252 1hyu_A AHPF, alkyl hydroperoxi 97.4 0.00044 1.5E-08 72.6 10.3 94 79-205 355-455 (521)
253 2e1m_A L-glutamate oxidase; L- 97.4 0.00018 6.1E-09 72.0 6.6 38 77-120 42-80 (376)
254 4gcm_A TRXR, thioredoxin reduc 97.4 0.00048 1.6E-08 67.0 9.5 100 79-205 145-245 (312)
255 2jae_A L-amino acid oxidase; o 97.4 0.00018 6.2E-09 74.8 6.4 39 77-121 9-47 (489)
256 1c0p_A D-amino acid oxidase; a 97.4 0.00018 6.2E-09 71.7 6.0 35 78-118 5-39 (363)
257 2bcg_G Secretory pathway GDP d 97.3 0.00016 5.6E-09 74.5 5.5 40 78-123 10-49 (453)
258 1rsg_A FMS1 protein; FAD bindi 97.3 0.00012 4E-09 76.9 4.2 38 79-122 8-46 (516)
259 2gag_A Heterotetrameric sarcos 97.3 0.00025 8.6E-09 80.0 7.0 90 79-205 284-385 (965)
260 1o94_A Tmadh, trimethylamine d 97.3 0.00038 1.3E-08 76.2 8.1 98 79-204 528-647 (729)
261 2ivd_A PPO, PPOX, protoporphyr 97.3 0.00018 6.1E-09 74.6 5.2 40 77-122 14-53 (478)
262 3c4a_A Probable tryptophan hyd 97.3 0.00018 6.3E-09 72.3 5.0 37 80-120 1-37 (381)
263 1v0j_A UDP-galactopyranose mut 97.3 0.00021 7E-09 72.5 5.2 38 79-121 7-44 (399)
264 3g3e_A D-amino-acid oxidase; F 97.2 0.00022 7.4E-09 70.7 4.9 39 80-118 1-39 (351)
265 2vdc_G Glutamate synthase [NAD 97.2 0.00035 1.2E-08 72.1 6.5 38 78-120 263-300 (456)
266 3h8l_A NADH oxidase; membrane 97.2 0.00057 1.9E-08 69.3 7.8 96 80-204 146-271 (409)
267 3hdq_A UDP-galactopyranose mut 97.2 0.00029 9.9E-09 71.1 5.4 37 78-120 28-64 (397)
268 1lqt_A FPRA; NADP+ derivative, 97.1 0.0023 7.8E-08 65.9 11.6 41 79-119 147-202 (456)
269 2vvm_A Monoamine oxidase N; FA 97.1 0.00041 1.4E-08 72.3 6.0 57 262-347 254-311 (495)
270 2iid_A L-amino-acid oxidase; f 97.1 0.00045 1.6E-08 72.0 6.2 39 78-122 32-70 (498)
271 3lov_A Protoporphyrinogen oxid 97.1 0.00033 1.1E-08 72.5 5.1 38 79-120 4-41 (475)
272 1sez_A Protoporphyrinogen oxid 97.1 0.00038 1.3E-08 72.6 5.5 37 79-121 13-49 (504)
273 3h28_A Sulfide-quinone reducta 97.1 0.00042 1.4E-08 70.9 5.6 100 80-204 143-257 (430)
274 3g5s_A Methylenetetrahydrofola 97.1 0.00039 1.3E-08 69.1 5.1 48 374-430 320-367 (443)
275 1i8t_A UDP-galactopyranose mut 97.0 0.00044 1.5E-08 69.1 4.8 35 80-120 2-36 (367)
276 1cjc_A Protein (adrenodoxin re 97.0 0.0026 9E-08 65.5 10.4 42 79-120 145-201 (460)
277 4dsg_A UDP-galactopyranose mut 97.0 0.00061 2.1E-08 70.8 5.5 38 78-120 8-45 (484)
278 3sx6_A Sulfide-quinone reducta 97.0 0.00075 2.6E-08 69.1 6.0 104 80-204 150-270 (437)
279 2bi7_A UDP-galactopyranose mut 97.0 0.00077 2.6E-08 67.8 5.9 36 80-121 4-39 (384)
280 4fk1_A Putative thioredoxin re 96.9 0.0019 6.6E-08 62.4 7.7 90 80-204 147-237 (304)
281 1gte_A Dihydropyrimidine dehyd 96.8 0.0023 7.9E-08 72.7 9.1 102 79-203 332-442 (1025)
282 2rgh_A Alpha-glycerophosphate 96.7 0.00095 3.3E-08 70.9 4.8 34 79-118 32-65 (571)
283 1d5t_A Guanine nucleotide diss 96.7 0.0012 4.3E-08 67.4 5.4 58 262-349 233-291 (433)
284 2z3y_A Lysine-specific histone 96.7 0.0017 5.9E-08 70.2 6.4 39 77-121 105-143 (662)
285 3p1w_A Rabgdi protein; GDI RAB 96.7 0.0011 3.9E-08 68.2 4.7 58 262-347 255-313 (475)
286 2bs2_A Quinol-fumarate reducta 96.7 0.0011 3.9E-08 71.3 4.9 57 367-425 371-429 (660)
287 3t37_A Probable dehydrogenase; 96.7 0.0011 3.7E-08 69.6 4.5 36 79-119 17-52 (526)
288 2xag_A Lysine-specific histone 96.6 0.002 6.8E-08 71.2 6.5 39 77-121 276-314 (852)
289 1w4x_A Phenylacetone monooxyge 96.6 0.0061 2.1E-07 64.2 10.0 36 79-120 186-221 (542)
290 3gyx_A Adenylylsulfate reducta 96.6 0.0012 4.1E-08 71.2 4.4 40 79-118 22-61 (662)
291 1b37_A Protein (polyamine oxid 96.5 0.0019 6.5E-08 66.8 5.2 37 79-121 4-41 (472)
292 1kdg_A CDH, cellobiose dehydro 96.5 0.0018 6E-08 68.4 4.8 36 78-119 6-41 (546)
293 1jnr_A Adenylylsulfate reducta 96.5 0.0018 6.1E-08 69.8 4.6 35 79-118 22-59 (643)
294 3qvp_A Glucose oxidase; oxidor 96.4 0.0021 7.3E-08 68.1 4.6 36 78-118 18-53 (583)
295 3ayj_A Pro-enzyme of L-phenyla 96.4 0.0021 7.2E-08 69.4 4.5 42 79-120 56-100 (721)
296 3q9t_A Choline dehydrogenase a 96.4 0.0025 8.6E-08 67.5 4.9 37 78-119 5-41 (577)
297 4b63_A L-ornithine N5 monooxyg 96.0 0.011 3.8E-07 61.5 7.9 38 78-119 245-282 (501)
298 1ju2_A HydroxynitrIle lyase; f 95.9 0.0038 1.3E-07 65.7 3.4 35 79-120 26-60 (536)
299 3fim_B ARYL-alcohol oxidase; A 95.8 0.004 1.4E-07 65.8 3.1 37 79-120 2-38 (566)
300 1coy_A Cholesterol oxidase; ox 95.7 0.009 3.1E-07 62.3 5.3 37 78-120 10-46 (507)
301 1n4w_A CHOD, cholesterol oxida 95.6 0.0077 2.6E-07 62.8 4.7 37 79-121 5-41 (504)
302 3hyw_A Sulfide-quinone reducta 95.5 0.022 7.6E-07 58.0 7.3 102 80-204 143-257 (430)
303 1gpe_A Protein (glucose oxidas 95.4 0.015 5.1E-07 61.8 6.0 38 78-120 23-60 (587)
304 3fwz_A Inner membrane protein 95.4 0.018 6.2E-07 48.6 5.3 37 76-118 4-40 (140)
305 2jbv_A Choline oxidase; alcoho 95.2 0.013 4.6E-07 61.6 4.5 38 78-120 12-49 (546)
306 1y56_A Hypothetical protein PH 94.9 0.034 1.2E-06 57.7 6.8 47 147-204 267-314 (493)
307 2g1u_A Hypothetical protein TM 94.8 0.038 1.3E-06 47.4 5.6 35 78-118 18-52 (155)
308 3llv_A Exopolyphosphatase-rela 94.5 0.034 1.2E-06 46.8 4.5 34 79-118 6-39 (141)
309 3ic5_A Putative saccharopine d 94.4 0.045 1.5E-06 44.1 5.0 35 79-118 5-39 (118)
310 2bry_A NEDD9 interacting prote 94.3 0.0063 2.1E-07 63.4 -0.6 137 191-350 37-232 (497)
311 1id1_A Putative potassium chan 94.1 0.064 2.2E-06 45.8 5.5 34 79-118 3-36 (153)
312 1lss_A TRK system potassium up 93.9 0.057 1.9E-06 45.0 4.7 33 80-118 5-37 (140)
313 3eag_A UDP-N-acetylmuramate:L- 93.4 0.11 3.8E-06 50.6 6.6 34 79-118 4-38 (326)
314 1vg0_A RAB proteins geranylger 93.3 0.074 2.5E-06 56.6 5.4 40 77-122 6-45 (650)
315 2ywl_A Thioredoxin reductase r 93.1 0.086 2.9E-06 46.2 4.7 107 80-204 2-111 (180)
316 3dfz_A SIRC, precorrin-2 dehyd 93.0 0.091 3.1E-06 48.1 4.8 35 78-118 30-64 (223)
317 4g65_A TRK system potassium up 92.8 0.019 6.5E-07 59.0 -0.1 34 79-118 3-36 (461)
318 3vrd_B FCCB subunit, flavocyto 92.7 0.041 1.4E-06 55.2 2.3 88 92-203 170-258 (401)
319 2hmt_A YUAA protein; RCK, KTN, 92.5 0.11 3.9E-06 43.3 4.5 34 79-118 6-39 (144)
320 3lk7_A UDP-N-acetylmuramoylala 92.4 0.16 5.3E-06 52.0 6.2 34 79-118 9-42 (451)
321 3c85_A Putative glutathione-re 92.1 0.14 4.8E-06 45.0 4.7 35 79-118 39-73 (183)
322 1kyq_A Met8P, siroheme biosynt 91.6 0.13 4.4E-06 48.7 4.0 34 79-118 13-46 (274)
323 3v76_A Flavoprotein; structura 91.4 0.36 1.2E-05 48.7 7.4 57 263-349 132-188 (417)
324 3dme_A Conserved exported prot 91.4 0.34 1.2E-05 47.3 7.2 61 262-348 149-209 (369)
325 3nlc_A Uncharacterized protein 91.4 0.41 1.4E-05 50.1 8.0 58 263-349 220-278 (549)
326 3kkj_A Amine oxidase, flavin-c 91.3 0.2 6.8E-06 46.1 5.1 38 381-427 293-330 (336)
327 3dje_A Fructosyl amine: oxygen 91.2 0.31 1.1E-05 49.3 6.8 58 263-349 161-222 (438)
328 2x3n_A Probable FAD-dependent 91.1 0.39 1.3E-05 47.9 7.3 58 263-349 107-167 (399)
329 3l4b_C TRKA K+ channel protien 91.0 0.16 5.3E-06 46.2 3.9 32 81-118 2-33 (218)
330 2x5o_A UDP-N-acetylmuramoylala 90.9 0.14 4.9E-06 52.0 4.0 34 79-118 5-38 (439)
331 2cul_A Glucose-inhibited divis 90.7 0.42 1.4E-05 43.8 6.6 122 264-424 69-231 (232)
332 2gqf_A Hypothetical protein HI 90.3 0.59 2E-05 46.8 7.9 63 261-349 107-169 (401)
333 3nyc_A D-arginine dehydrogenas 90.3 0.37 1.2E-05 47.4 6.2 57 262-348 153-209 (381)
334 4dio_A NAD(P) transhydrogenase 90.3 0.29 1E-05 48.8 5.3 34 79-118 190-223 (405)
335 4ffl_A PYLC; amino acid, biosy 89.9 0.32 1.1E-05 48.0 5.4 35 79-119 1-35 (363)
336 1y56_B Sarcosine oxidase; dehy 89.7 0.56 1.9E-05 46.2 7.1 57 262-348 148-205 (382)
337 1vl6_A Malate oxidoreductase; 89.6 0.72 2.4E-05 45.5 7.5 34 79-117 192-225 (388)
338 2a9f_A Putative malic enzyme ( 89.6 0.31 1.1E-05 48.2 4.9 35 79-118 188-222 (398)
339 3p2y_A Alanine dehydrogenase/p 89.6 0.32 1.1E-05 48.1 4.9 34 79-118 184-217 (381)
340 2gf3_A MSOX, monomeric sarcosi 89.5 0.61 2.1E-05 46.0 7.2 70 248-349 137-206 (389)
341 2i0z_A NAD(FAD)-utilizing dehy 89.5 0.7 2.4E-05 46.9 7.7 57 263-348 134-191 (447)
342 1f0y_A HCDH, L-3-hydroxyacyl-C 89.4 0.44 1.5E-05 45.6 5.8 34 79-118 15-48 (302)
343 1ryi_A Glycine oxidase; flavop 89.0 0.59 2E-05 46.0 6.6 58 262-349 163-220 (382)
344 3ius_A Uncharacterized conserv 88.9 0.42 1.5E-05 45.0 5.3 35 78-118 4-38 (286)
345 3ps9_A TRNA 5-methylaminomethy 88.9 0.56 1.9E-05 50.5 6.8 58 263-349 417-474 (676)
346 2vvm_A Monoamine oxidase N; FA 88.7 0.78 2.7E-05 47.1 7.5 38 79-122 39-76 (495)
347 2uzz_A N-methyl-L-tryptophan o 88.7 0.73 2.5E-05 45.2 7.0 57 263-349 149-205 (372)
348 3i83_A 2-dehydropantoate 2-red 88.7 0.44 1.5E-05 46.1 5.3 34 79-118 2-35 (320)
349 3alj_A 2-methyl-3-hydroxypyrid 88.6 0.99 3.4E-05 44.5 7.9 55 263-349 107-161 (379)
350 1pzg_A LDH, lactate dehydrogen 88.5 0.5 1.7E-05 46.0 5.5 34 79-118 9-43 (331)
351 1lld_A L-lactate dehydrogenase 88.4 0.48 1.6E-05 45.7 5.3 34 79-118 7-42 (319)
352 3oj0_A Glutr, glutamyl-tRNA re 88.1 0.36 1.2E-05 40.6 3.7 34 79-118 21-54 (144)
353 3e8x_A Putative NAD-dependent 88.0 0.54 1.9E-05 42.9 5.2 35 78-118 20-55 (236)
354 3pvc_A TRNA 5-methylaminomethy 87.8 0.66 2.2E-05 50.1 6.4 58 263-349 412-470 (689)
355 3ado_A Lambda-crystallin; L-gu 87.7 0.43 1.5E-05 46.2 4.4 34 79-118 6-39 (319)
356 1pjq_A CYSG, siroheme synthase 87.7 0.51 1.7E-05 48.2 5.2 34 79-118 12-45 (457)
357 1x13_A NAD(P) transhydrogenase 87.6 0.52 1.8E-05 47.2 5.1 34 79-118 172-205 (401)
358 1k0i_A P-hydroxybenzoate hydro 87.3 1.7 5.7E-05 43.0 8.7 60 264-350 104-165 (394)
359 2hjr_A Malate dehydrogenase; m 87.2 0.68 2.3E-05 45.0 5.6 34 79-118 14-48 (328)
360 1ur5_A Malate dehydrogenase; o 87.0 0.69 2.3E-05 44.6 5.4 35 79-118 2-36 (309)
361 1l7d_A Nicotinamide nucleotide 87.0 0.65 2.2E-05 46.2 5.4 34 79-118 172-205 (384)
362 3gg2_A Sugar dehydrogenase, UD 86.8 0.65 2.2E-05 47.3 5.3 33 80-118 3-35 (450)
363 3vtf_A UDP-glucose 6-dehydroge 86.7 0.85 2.9E-05 46.1 6.1 39 74-118 16-54 (444)
364 4e12_A Diketoreductase; oxidor 86.7 0.61 2.1E-05 44.2 4.8 34 79-118 4-37 (283)
365 1jw9_B Molybdopterin biosynthe 86.4 0.61 2.1E-05 43.4 4.5 35 79-118 31-65 (249)
366 3hn2_A 2-dehydropantoate 2-red 86.4 0.51 1.8E-05 45.4 4.2 34 79-118 2-35 (312)
367 3doj_A AT3G25530, dehydrogenas 86.3 0.81 2.8E-05 44.0 5.5 36 77-118 19-54 (310)
368 2oln_A NIKD protein; flavoprot 86.2 1.1 3.7E-05 44.5 6.6 55 264-348 154-208 (397)
369 2raf_A Putative dinucleotide-b 86.1 0.88 3E-05 40.9 5.3 35 79-119 19-53 (209)
370 3l9w_A Glutathione-regulated p 86.1 0.59 2E-05 47.0 4.5 34 79-118 4-37 (413)
371 1y6j_A L-lactate dehydrogenase 85.9 0.8 2.7E-05 44.3 5.3 36 79-118 7-42 (318)
372 2ewd_A Lactate dehydrogenase,; 85.8 0.78 2.7E-05 44.3 5.1 34 79-118 4-38 (317)
373 2ew2_A 2-dehydropantoate 2-red 85.6 0.82 2.8E-05 43.7 5.2 33 80-118 4-36 (316)
374 1pjc_A Protein (L-alanine dehy 85.5 0.93 3.2E-05 44.7 5.6 34 79-118 167-200 (361)
375 1t2d_A LDH-P, L-lactate dehydr 85.4 1 3.5E-05 43.6 5.7 34 79-118 4-38 (322)
376 3ihg_A RDME; flavoenzyme, anth 85.1 1.7 5.9E-05 45.1 7.7 64 263-348 120-183 (535)
377 3r6d_A NAD-dependent epimerase 85.1 1.3 4.4E-05 39.9 6.0 35 78-118 4-40 (221)
378 2v6b_A L-LDH, L-lactate dehydr 85.0 0.91 3.1E-05 43.5 5.1 32 81-118 2-35 (304)
379 2aef_A Calcium-gated potassium 84.8 0.53 1.8E-05 43.1 3.2 33 79-118 9-41 (234)
380 2dpo_A L-gulonate 3-dehydrogen 84.7 0.74 2.5E-05 44.5 4.4 34 79-118 6-39 (319)
381 3p1w_A Rabgdi protein; GDI RAB 84.6 2 6.7E-05 44.0 7.6 39 78-122 19-57 (475)
382 1ks9_A KPA reductase;, 2-dehyd 84.4 1.1 3.6E-05 42.3 5.3 32 81-118 2-33 (291)
383 2gag_B Heterotetrameric sarcos 84.4 1.4 4.8E-05 43.6 6.4 57 263-348 174-230 (405)
384 2we8_A Xanthine dehydrogenase; 84.3 1.2 4.2E-05 44.1 5.8 38 78-121 203-240 (386)
385 2qa2_A CABE, polyketide oxygen 84.3 2.2 7.5E-05 44.0 8.0 60 263-348 107-166 (499)
386 2zxi_A TRNA uridine 5-carboxym 84.3 1.3 4.4E-05 46.9 6.3 48 373-429 380-427 (637)
387 4id9_A Short-chain dehydrogena 84.3 0.9 3.1E-05 44.1 4.8 36 77-118 17-53 (347)
388 3qj4_A Renalase; FAD/NAD(P)-bi 84.1 1.4 4.8E-05 42.7 6.1 54 265-347 111-164 (342)
389 3gpi_A NAD-dependent epimerase 84.1 1.2 3.9E-05 42.0 5.4 33 80-118 4-36 (286)
390 3e1t_A Halogenase; flavoprotei 84.0 2.1 7.1E-05 44.2 7.7 60 264-349 112-173 (512)
391 3pid_A UDP-glucose 6-dehydroge 84.0 0.89 3E-05 45.9 4.7 33 79-118 36-68 (432)
392 2eez_A Alanine dehydrogenase; 83.9 1.1 3.9E-05 44.2 5.4 34 79-118 166-199 (369)
393 2i6t_A Ubiquitin-conjugating e 83.9 0.96 3.3E-05 43.4 4.7 36 79-118 14-49 (303)
394 3phh_A Shikimate dehydrogenase 83.7 1.2 4.1E-05 41.8 5.2 34 79-118 118-151 (269)
395 3g79_A NDP-N-acetyl-D-galactos 83.7 1.1 3.7E-05 45.9 5.2 35 79-119 18-54 (478)
396 3g17_A Similar to 2-dehydropan 83.6 0.76 2.6E-05 43.8 3.9 34 79-118 2-35 (294)
397 2qa1_A PGAE, polyketide oxygen 83.6 2.1 7.3E-05 44.1 7.6 59 264-348 107-165 (500)
398 3nix_A Flavoprotein/dehydrogen 83.6 1.5 5.3E-05 43.6 6.4 58 264-348 107-166 (421)
399 2y0c_A BCEC, UDP-glucose dehyd 83.5 1.1 3.9E-05 45.9 5.3 34 79-118 8-41 (478)
400 1nyt_A Shikimate 5-dehydrogena 83.4 1.3 4.5E-05 41.6 5.4 34 79-118 119-152 (271)
401 3gvi_A Malate dehydrogenase; N 83.3 1.4 4.6E-05 42.8 5.5 34 79-118 7-41 (324)
402 1guz_A Malate dehydrogenase; o 83.2 1.4 4.7E-05 42.4 5.6 34 81-118 2-35 (310)
403 3ces_A MNMG, tRNA uridine 5-ca 83.1 1.7 5.9E-05 46.1 6.6 48 373-429 375-422 (651)
404 3q2o_A Phosphoribosylaminoimid 83.0 1.6 5.6E-05 43.3 6.2 36 78-119 13-48 (389)
405 3rui_A Ubiquitin-like modifier 82.9 2 6.8E-05 41.7 6.5 35 79-118 34-68 (340)
406 3fmw_A Oxygenase; mithramycin, 82.9 1.6 5.5E-05 45.9 6.3 59 263-348 148-207 (570)
407 2vhw_A Alanine dehydrogenase; 82.8 1.3 4.5E-05 43.8 5.4 35 78-118 167-201 (377)
408 3vps_A TUNA, NAD-dependent epi 82.8 1.3 4.4E-05 42.2 5.2 35 78-118 6-41 (321)
409 3g0o_A 3-hydroxyisobutyrate de 82.8 1.1 3.9E-05 42.8 4.8 34 79-118 7-40 (303)
410 2vou_A 2,6-dihydroxypyridine h 82.6 2.4 8.4E-05 41.9 7.4 45 276-349 110-154 (397)
411 3k6j_A Protein F01G10.3, confi 82.6 1.9 6.5E-05 43.8 6.5 35 79-119 54-88 (460)
412 2e4g_A Tryptophan halogenase; 82.6 2 6.8E-05 44.9 6.9 59 263-349 194-253 (550)
413 3ew7_A LMO0794 protein; Q8Y8U8 82.6 1.6 5.3E-05 39.0 5.4 32 81-118 2-34 (221)
414 3dhn_A NAD-dependent epimerase 82.5 1.3 4.4E-05 39.9 4.8 34 79-118 4-38 (227)
415 2vns_A Metalloreductase steap3 82.5 1.3 4.6E-05 39.9 4.9 34 79-118 28-61 (215)
416 3dtt_A NADP oxidoreductase; st 82.5 1.6 5.4E-05 40.3 5.5 36 77-118 17-52 (245)
417 3tl2_A Malate dehydrogenase; c 82.4 1.6 5.5E-05 42.0 5.7 33 79-117 8-41 (315)
418 1ldn_A L-lactate dehydrogenase 82.4 1.4 4.7E-05 42.6 5.2 37 78-118 5-41 (316)
419 3cp8_A TRNA uridine 5-carboxym 82.1 1.5 5.1E-05 46.6 5.7 46 375-429 371-416 (641)
420 1hdo_A Biliverdin IX beta redu 82.0 1.6 5.4E-05 38.5 5.1 33 80-118 4-37 (206)
421 2egg_A AROE, shikimate 5-dehyd 81.9 1.6 5.5E-05 41.7 5.4 34 79-118 141-175 (297)
422 3pqe_A L-LDH, L-lactate dehydr 81.9 1.4 4.8E-05 42.7 5.0 36 79-118 5-40 (326)
423 3p7m_A Malate dehydrogenase; p 81.8 1.7 5.7E-05 42.0 5.5 35 79-118 5-39 (321)
424 1bg6_A N-(1-D-carboxylethyl)-L 81.7 1.5 5.2E-05 42.8 5.3 33 80-118 5-37 (359)
425 1z82_A Glycerol-3-phosphate de 81.7 1.5 5.2E-05 42.5 5.3 35 78-118 13-47 (335)
426 2weu_A Tryptophan 5-halogenase 81.6 2.7 9.2E-05 43.3 7.5 59 263-349 173-231 (511)
427 3qha_A Putative oxidoreductase 81.6 1.2 4.1E-05 42.4 4.4 34 79-118 15-48 (296)
428 3rp8_A Flavoprotein monooxygen 81.5 2.2 7.6E-05 42.4 6.6 54 265-349 129-182 (407)
429 3qvo_A NMRA family protein; st 81.4 1.3 4.4E-05 40.4 4.4 36 78-118 22-58 (236)
430 1n7h_A GDP-D-mannose-4,6-dehyd 81.4 1.7 5.9E-05 42.7 5.6 35 78-118 27-62 (381)
431 3atr_A Conserved archaeal prot 81.3 2.9 9.9E-05 42.3 7.5 62 264-349 101-163 (453)
432 3ego_A Probable 2-dehydropanto 81.3 1.5 5.3E-05 42.0 5.1 33 79-118 2-34 (307)
433 3g5s_A Methylenetetrahydrofola 81.3 1.6 5.5E-05 43.4 5.2 33 80-118 2-34 (443)
434 1vpd_A Tartronate semialdehyde 81.2 1.4 4.7E-05 41.9 4.7 34 79-118 5-38 (299)
435 3pef_A 6-phosphogluconate dehy 81.1 1.6 5.5E-05 41.3 5.1 33 80-118 2-34 (287)
436 3h5n_A MCCB protein; ubiquitin 81.1 2.1 7.1E-05 42.0 6.0 35 79-118 118-152 (353)
437 2pzm_A Putative nucleotide sug 81.0 2.3 7.9E-05 40.9 6.3 34 79-118 20-54 (330)
438 3ghy_A Ketopantoate reductase 81.0 1.5 5.2E-05 42.5 5.0 32 80-117 4-35 (335)
439 1zej_A HBD-9, 3-hydroxyacyl-CO 80.9 1.4 4.7E-05 42.0 4.5 35 77-118 10-44 (293)
440 1jay_A Coenzyme F420H2:NADP+ o 80.9 1.9 6.4E-05 38.5 5.3 32 81-118 2-34 (212)
441 3vku_A L-LDH, L-lactate dehydr 80.8 1.6 5.4E-05 42.3 4.9 37 78-118 8-44 (326)
442 1p77_A Shikimate 5-dehydrogena 80.8 1.3 4.4E-05 41.7 4.3 34 79-118 119-152 (272)
443 3axb_A Putative oxidoreductase 80.8 1.9 6.6E-05 43.4 5.9 30 262-291 180-209 (448)
444 4a7p_A UDP-glucose dehydrogena 80.7 1.6 5.4E-05 44.3 5.1 34 79-118 8-41 (446)
445 3d0o_A L-LDH 1, L-lactate dehy 80.7 1.6 5.5E-05 42.1 5.0 36 79-118 6-41 (317)
446 3orq_A N5-carboxyaminoimidazol 80.6 2.6 9E-05 41.6 6.7 36 78-119 11-46 (377)
447 2h78_A Hibadh, 3-hydroxyisobut 80.6 1.5 5.1E-05 41.8 4.8 34 79-118 3-36 (302)
448 3on5_A BH1974 protein; structu 80.6 1.2 4.2E-05 43.6 4.1 37 79-121 199-235 (362)
449 4ezb_A Uncharacterized conserv 80.5 1.5 5.3E-05 42.2 4.8 35 78-118 23-58 (317)
450 3k96_A Glycerol-3-phosphate de 80.4 1.4 5E-05 43.2 4.6 34 79-118 29-62 (356)
451 1d5t_A Guanine nucleotide diss 80.4 1.8 6.2E-05 43.7 5.5 38 79-122 6-43 (433)
452 4dll_A 2-hydroxy-3-oxopropiona 80.3 1.4 4.8E-05 42.5 4.4 34 79-118 31-64 (320)
453 2pv7_A T-protein [includes: ch 80.2 2.4 8.3E-05 40.3 6.1 35 78-118 20-55 (298)
454 1zcj_A Peroxisomal bifunctiona 80.2 2.2 7.5E-05 43.5 6.1 34 79-118 37-70 (463)
455 1h6d_A Precursor form of gluco 80.1 2 6.8E-05 43.4 5.7 36 78-118 82-119 (433)
456 3c4n_A Uncharacterized protein 80.1 1.5 5.1E-05 43.7 4.7 57 262-348 171-236 (405)
457 3h2s_A Putative NADH-flavin re 80.0 2.1 7.1E-05 38.3 5.3 32 81-118 2-34 (224)
458 1hyh_A L-hicdh, L-2-hydroxyiso 80.0 1.7 5.9E-05 41.6 5.0 35 80-118 2-36 (309)
459 4g65_A TRK system potassium up 79.9 2 6.9E-05 43.8 5.6 34 78-118 234-267 (461)
460 2ydy_A Methionine adenosyltran 79.9 1.8 6.2E-05 41.2 5.1 34 79-118 2-36 (315)
461 1zud_1 Adenylyltransferase THI 79.8 1.7 5.9E-05 40.3 4.7 35 79-118 28-62 (251)
462 3m2p_A UDP-N-acetylglucosamine 79.7 2.1 7.1E-05 40.8 5.4 34 79-118 2-36 (311)
463 1chu_A Protein (L-aspartate ox 79.7 1.9 6.4E-05 45.0 5.5 34 79-119 8-41 (540)
464 3c24_A Putative oxidoreductase 79.7 2.4 8.2E-05 40.0 5.8 34 79-118 11-45 (286)
465 2rir_A Dipicolinate synthase, 79.6 2 6.8E-05 41.0 5.3 35 78-118 156-190 (300)
466 3ond_A Adenosylhomocysteinase; 79.5 1.7 5.8E-05 44.3 4.9 34 79-118 265-298 (488)
467 3tnl_A Shikimate dehydrogenase 79.5 2.3 7.7E-05 41.0 5.5 35 78-118 153-188 (315)
468 1mv8_A GMD, GDP-mannose 6-dehy 79.4 1.6 5.4E-05 44.2 4.7 32 81-118 2-33 (436)
469 3d4o_A Dipicolinate synthase s 79.4 2.1 7.2E-05 40.7 5.3 35 78-118 154-188 (293)
470 3abi_A Putative uncharacterize 79.3 2.1 7.1E-05 42.1 5.4 35 77-118 14-48 (365)
471 3jyo_A Quinate/shikimate dehyd 79.3 2.2 7.6E-05 40.3 5.4 35 78-118 126-161 (283)
472 3jsk_A Cypbp37 protein; octame 79.3 1.7 5.7E-05 42.5 4.5 90 331-425 234-335 (344)
473 4b4o_A Epimerase family protei 79.2 2.2 7.5E-05 40.3 5.4 32 81-118 2-34 (298)
474 3l6d_A Putative oxidoreductase 79.0 2 6.9E-05 41.0 5.1 35 78-118 8-42 (306)
475 4aj2_A L-lactate dehydrogenase 79.0 2.5 8.7E-05 40.9 5.8 37 78-118 18-54 (331)
476 2zqz_A L-LDH, L-lactate dehydr 78.9 2 7E-05 41.5 5.1 38 77-118 7-44 (326)
477 2r6j_A Eugenol synthase 1; phe 78.9 1.9 6.6E-05 41.1 5.0 35 78-118 10-45 (318)
478 2dkn_A 3-alpha-hydroxysteroid 78.8 2.3 8E-05 38.8 5.3 33 80-118 2-35 (255)
479 1d4d_A Flavocytochrome C fumar 78.6 4.7 0.00016 42.3 8.2 62 264-349 256-318 (572)
480 3pdu_A 3-hydroxyisobutyrate de 78.6 1.4 4.9E-05 41.6 3.8 33 80-118 2-34 (287)
481 1dlj_A UDP-glucose dehydrogena 78.6 1.9 6.5E-05 43.1 4.9 31 81-118 2-32 (402)
482 3s2u_A UDP-N-acetylglucosamine 78.5 1.7 5.9E-05 42.6 4.6 33 78-116 1-38 (365)
483 3h8v_A Ubiquitin-like modifier 78.4 2.1 7.1E-05 40.7 4.8 35 79-118 36-70 (292)
484 1lu9_A Methylene tetrahydromet 78.4 2.5 8.5E-05 40.0 5.5 34 79-118 119-153 (287)
485 3hwr_A 2-dehydropantoate 2-red 78.4 2.3 7.7E-05 41.0 5.3 34 78-118 18-51 (318)
486 4huj_A Uncharacterized protein 78.3 1.2 4.1E-05 40.4 3.1 34 79-118 23-57 (220)
487 3i3l_A Alkylhalidase CMLS; fla 78.3 4.2 0.00014 42.8 7.7 61 263-348 128-188 (591)
488 3ax6_A Phosphoribosylaminoimid 78.3 2.2 7.7E-05 42.0 5.3 33 80-118 2-34 (380)
489 1a5z_A L-lactate dehydrogenase 78.2 1.8 6.1E-05 41.8 4.4 32 81-118 2-35 (319)
490 2bs2_A Quinol-fumarate reducta 78.1 2.3 8E-05 45.5 5.7 34 79-118 5-38 (660)
491 3ggo_A Prephenate dehydrogenas 78.1 2.4 8.2E-05 40.8 5.3 36 79-118 33-68 (314)
492 2b69_A UDP-glucuronate decarbo 78.0 2.6 8.8E-05 40.7 5.6 35 78-118 26-61 (343)
493 2o3j_A UDP-glucose 6-dehydroge 78.0 2.1 7.2E-05 43.9 5.1 36 79-118 9-44 (481)
494 3fi9_A Malate dehydrogenase; s 77.9 2.3 7.8E-05 41.5 5.1 36 79-118 8-44 (343)
495 2qyt_A 2-dehydropantoate 2-red 77.9 1.8 6.2E-05 41.3 4.4 36 80-116 9-45 (317)
496 1smk_A Malate dehydrogenase, g 77.8 1.7 5.7E-05 42.2 4.1 36 79-118 8-44 (326)
497 3gyx_A Adenylylsulfate reducta 77.7 1.8 6.3E-05 46.3 4.7 45 375-426 446-490 (662)
498 1ez4_A Lactate dehydrogenase; 77.7 2 6.9E-05 41.4 4.6 36 79-118 5-40 (318)
499 3qsg_A NAD-binding phosphogluc 77.7 1.9 6.4E-05 41.4 4.4 34 79-118 24-58 (312)
500 3ldh_A Lactate dehydrogenase; 77.7 2.3 7.8E-05 41.2 4.9 36 79-118 21-56 (330)
No 1
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=3.9e-60 Score=499.76 Aligned_cols=375 Identities=21% Similarity=0.336 Sum_probs=304.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhc--CCCeEE
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLA--NTGVQF 154 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~--~~~v~~ 154 (513)
+.+++|||||||+||+++|+.|++ .+++|||||++++|+|+|++++++.|.++++++..++++++. +.+++|
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~------~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~ 113 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDT------KKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTY 113 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCT------TTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhh------CCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEE
Confidence 457899999999999999999987 567999999999999999999999999999999888887753 357999
Q ss_pred EEEeEEEEeCCCCcCcCCCceeeccc-------------eEecCCceEEEecEEEEeCCCCCCCCCCCCccccCCCCCCH
Q 010331 155 FKDRVKLLCPSDHLGVNGPMACTHGG-------------TVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTL 221 (513)
Q Consensus 155 ~~~~V~~id~~~~~~~~~~~v~~~~~-------------~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~ 221 (513)
++++|++||++.+. |.+... .+...++.+++||+||||||++++.+++||+.+++++++++
T Consensus 114 ~~~~v~~ID~~~k~------V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~ 187 (502)
T 4g6h_A 114 YEAEATSINPDRNT------VTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEI 187 (502)
T ss_dssp EEEEEEEEEGGGTE------EEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSH
T ss_pred EEEEEEEEEhhhCE------EEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCH
Confidence 99999999987762 222110 01123466899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHhh----------------hH-----------HHH---------------HhcCcEEEEeccCeec
Q 010331 222 EDACRVDRKLSE-LERR----------------NF-----------ERL---------------EEKGIVQAINVETTIC 258 (513)
Q Consensus 222 ~~a~~l~~~l~~-~~~~----------------~v-----------~~l---------------~~~~~vtli~~~~~ll 258 (513)
+++..+++.+.. ++.. ++ .++ .....|++++..++++
T Consensus 188 ~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il 267 (502)
T 4g6h_A 188 PNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL 267 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS
T ss_pred HHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc
Confidence 999999887632 1111 11 111 2234699999999999
Q ss_pred CCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeec
Q 010331 259 PTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEAD 338 (513)
Q Consensus 259 ~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD 338 (513)
+.+++.+++++++.|+++||+|++++.|.+++++ .+.+.....+....+++|+||
T Consensus 268 ~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~-------------------------~~~~~~~~~dg~~~~~~i~ad 322 (502)
T 4g6h_A 268 NMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEK-------------------------QLLAKTKHEDGKITEETIPYG 322 (502)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEETTEEEEEECSS-------------------------EEEEEEECTTSCEEEEEEECS
T ss_pred cCCCHHHHHHHHHHHHhcceeeecCceEEEEeCC-------------------------ceEEEEEecCcccceeeeccC
Confidence 9999999999999999999999999999999873 333332211111134679999
Q ss_pred eEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHH
Q 010331 339 LVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGW 418 (513)
Q Consensus 339 ~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ 418 (513)
+||||+|.+|| ++..... ...+...+.+|+|.||++||++++|||||+|||+.. +.|++++.|++||+++|+
T Consensus 323 ~viwa~Gv~~~-~~~~~l~-~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~------~~p~~a~~A~qqg~~~A~ 394 (502)
T 4g6h_A 323 TLIWATGNKAR-PVITDLF-KKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFA------GLPPTAQVAHQEAEYLAK 394 (502)
T ss_dssp EEEECCCEECC-HHHHHHH-HHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEES------SSCCCHHHHHHHHHHHHH
T ss_pred EEEEccCCcCC-HHHHhHH-HhccccccCCCceeECCccccCCCCCEEEEEcccCC------CCCCchHHHHHHHHHHHH
Confidence 99999999998 3322110 022455678899999999999999999999999987 568999999999999999
Q ss_pred HHHHH--------------------HCCCCCCCcccCCceeEEEecCCCeeecCCc--cCCeEEccHHHHHHHHHhHhhc
Q 010331 419 NLWAA--------------------INDRPLLPFRFQNLGEMMILGRNDAAVSPSF--VEGVTLDGPIGHSARKLAYLIR 476 (513)
Q Consensus 419 ni~~~--------------------l~~~~~~~f~~~~~g~~~~lG~~~~~~~~~~--~~~~~~~G~~~~~~k~~~~~~~ 476 (513)
||.+. +.+++++||+|.++|+|++||+++|+++... ..++.++|+++|++|+++|+++
T Consensus 395 ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~y~~~G~~a~lG~~~av~~~~~~~~~~~~~~G~~a~~~w~~~yl~~ 474 (502)
T 4g6h_A 395 NFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSM 474 (502)
T ss_dssp HHHHHTTCHHHHHHTTSSSCCHHHHHHHTTCCCCCCCCCEEEEECSTTCEEEEEEETTEEEEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHhccchhhhhhhhccchhhhhhcCCCCCCCEecCcceEEEEeCCceEEEccCCCccceecccHHHHHHHHHHHHHH
Confidence 99763 4567889999999999999999999987421 1235678999999999999999
Q ss_pred CCCcchhhhhHHhhhhHHHH
Q 010331 477 LPTDEHRLKVGVSWLTKSAI 496 (513)
Q Consensus 477 ~~~~~~~~~~~~~w~~~~~~ 496 (513)
+|+|+||++++++|++.+.+
T Consensus 475 l~~~r~r~~v~~~W~~~~~f 494 (502)
T 4g6h_A 475 ILSARSRLKVFFDWIKLAFF 494 (502)
T ss_dssp CSCHHHHHHHHHHHHHHHHS
T ss_pred ccchhhhHHHHHHHHHHHhC
Confidence 99999999999999988764
No 2
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=1.7e-50 Score=419.70 Aligned_cols=365 Identities=19% Similarity=0.207 Sum_probs=293.9
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (513)
|.++|||||||+||++||.+|++++ ++++|||||++++|+|+|+++.+..|..+++++..++++++++.+++|+++
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~~----~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~ 76 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNLM----PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE 76 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHC----TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS
T ss_pred CCCcEEEECCCHHHHHHHHHHhccC----cCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe
Confidence 3468999999999999999999864 568999999999999999999999999999999999999998899999999
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhh
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERR 237 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~ 237 (513)
+|+.||++++ +|.+++|++++||+||||||+++. +++||+.++.+.+++.+++.++++.+..+...
T Consensus 77 ~v~~Id~~~~-------------~V~~~~g~~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~~ 142 (430)
T 3hyw_A 77 KAESIDPDAN-------------TVTTQSGKKIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQELYAN 142 (430)
T ss_dssp CEEEEETTTT-------------EEEETTCCEEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHS
T ss_pred EEEEEECCCC-------------EEEECCCCEEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHHHHHHHhhccC
Confidence 9999999887 589999999999999999999864 57999999999999999999999988665321
Q ss_pred h--H----------------------HHHHhc-----CcEEEEeccCeec---CCCChhHHHHHHHHHHhCCcEEEcCce
Q 010331 238 N--F----------------------ERLEEK-----GIVQAINVETTIC---PTGTPGNREAALKVLSARKVQLVLGYF 285 (513)
Q Consensus 238 ~--v----------------------~~l~~~-----~~vtli~~~~~ll---~~~~~~~~~~~~~~l~~~gV~v~~~~~ 285 (513)
. + ..+... -.+++++..+.+. +...+...+.+++.++++||++++++.
T Consensus 143 ~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~ 222 (430)
T 3hyw_A 143 PGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVA 222 (430)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCE
T ss_pred CceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCce
Confidence 1 0 122222 2478887765443 234566778889999999999999999
Q ss_pred eeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCcc
Q 010331 286 VRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPL 365 (513)
Q Consensus 286 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~ 365 (513)
|++++. +.+.++.. .++++++++|+++|++|++|+ +++...+ ..+..
T Consensus 223 v~~v~~-------------------------~~~~~~~~----~g~~~~i~~d~vi~~~G~~~~-~~~~~~~---~~l~~ 269 (430)
T 3hyw_A 223 VKAIEP-------------------------DKVIYEDL----NGNTHEVPAKFTMFMPSFQGP-EVVASAG---DKVAN 269 (430)
T ss_dssp EEEECS-------------------------SEEEEECT----TSCEEEEECSEEEEECEEECC-HHHHTTC---TTTBC
T ss_pred EEEEeC-------------------------CceEEEee----CCCceEeecceEEEeccCCCc-hHHHhcc---ccccc
Confidence 999976 34444421 125678999999999999998 5554332 13445
Q ss_pred CCCCCeEeCCCccccCCCCEEEEcccccccCCCCC----CCCCchHHHHHHHHHHHHHHHHHHCCCCCCCcccCCceeEE
Q 010331 366 NARGQAETDETLCVKGHPRIFALGDSSALRDSSGR----PLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMM 441 (513)
Q Consensus 366 ~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~----~~~~~a~~A~~qg~~~a~ni~~~l~~~~~~~f~~~~~g~~~ 441 (513)
+.+|+|.||++||++++|||||+|||+..++..+. ..|++++.|.+||+++|+||.+.++|++.+++.+...++++
T Consensus 270 ~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~~~~~~~~~~~~~ 349 (430)
T 3hyw_A 270 PANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAICIA 349 (430)
T ss_dssp TTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCCEEECCCEEEEE
T ss_pred CCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCcccCCcEEEEE
Confidence 66789999999998899999999999998865443 35899999999999999999999999987666566678999
Q ss_pred EecCCCeeecC-----CccCCeEEccHHH---------HHHHHHhHhhcCCCcchhhhhHHhhhhH
Q 010331 442 ILGRNDAAVSP-----SFVEGVTLDGPIG---------HSARKLAYLIRLPTDEHRLKVGVSWLTK 493 (513)
Q Consensus 442 ~lG~~~~~~~~-----~~~~~~~~~G~~~---------~~~k~~~~~~~~~~~~~~~~~~~~w~~~ 493 (513)
++|.+.+++.. +....+...|.++ |++|++.+..++|.|++|+.++++|+.+
T Consensus 350 ~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~K~~~~~~~~w~~~~~~~~~~~~~~~~~~~~w~~~ 415 (430)
T 3hyw_A 350 DFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHP 415 (430)
T ss_dssp ECSSSEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHHHHCCCS
T ss_pred EcCCCcEEEEEcccCCccccccccccHHHHHHHHHHHHHHHHHHHHhCccHhHHHHHHHHHhcccc
Confidence 99999887631 1111244556665 4556666677889999999999999764
No 3
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=2.2e-41 Score=352.14 Aligned_cols=350 Identities=20% Similarity=0.192 Sum_probs=275.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEEe
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (513)
+++|||||||+||+++|..|++... .+++|+|||+++++.|.|.++.+..+....+++..++.+++++.+++++.++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~---~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~ 80 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALG---SGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQS 80 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHG---GGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSC
T ss_pred CCcEEEECCcHHHHHHHHHHhccCC---CcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeE
Confidence 4799999999999999999998321 4569999999999999999999888888777888888889988999999999
Q ss_pred EEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccc---cCCCCCCHHHHHHHHHHHHHHH
Q 010331 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAE---FAFPFSTLEDACRVDRKLSELE 235 (513)
Q Consensus 159 V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~---~~~~~~~~~~a~~l~~~l~~~~ 235 (513)
|+.|+++.+ .|.++++.++.||+||+|||++++.+.+||+.+ +.+.+++.+++..+++.+..+.
T Consensus 81 v~~id~~~~-------------~V~~~~g~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 147 (437)
T 3sx6_A 81 AEQIDAEAQ-------------NITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALL 147 (437)
T ss_dssp EEEEETTTT-------------EEEETTSCEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCC-------------EEEECCCCEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHH
Confidence 999998776 588888888999999999999999999999864 5567889999988887665431
Q ss_pred h---hh--------------H-------HHHHhcC-----c-EEEEeccCeec----CCCChhHHHHHHHHHHhCCcEEE
Q 010331 236 R---RN--------------F-------ERLEEKG-----I-VQAINVETTIC----PTGTPGNREAALKVLSARKVQLV 281 (513)
Q Consensus 236 ~---~~--------------v-------~~l~~~~-----~-vtli~~~~~ll----~~~~~~~~~~~~~~l~~~gV~v~ 281 (513)
. .+ + ..+.+.+ . |+++++.+.+. +..+ ...+.+++.|+++||+++
T Consensus 148 ~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~-~~~~~~~~~l~~~gI~~~ 226 (437)
T 3sx6_A 148 REPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVG-DSKGILTKGLKEEGIEAY 226 (437)
T ss_dssp HSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCT-THHHHHHHHHHHTTCEEE
T ss_pred hCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcch-HHHHHHHHHHHHCCCEEE
Confidence 1 00 1 2233333 2 99999987763 3333 477888899999999999
Q ss_pred cCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCC--cceEEeeceEEEecCCCCCCCCCCCCCCc
Q 010331 282 LGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGL--ESQIFEADLVLWTVGSKPLLPHVEPPNNR 359 (513)
Q Consensus 282 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~--~g~~i~aD~vi~a~G~~p~~~~l~~~~~~ 359 (513)
+++.+++++.+ .+.++... .++. +++++++|++++++|+.|+..+...
T Consensus 227 ~~~~v~~v~~~-------------------------~v~~~~~~-~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~---- 276 (437)
T 3sx6_A 227 TNCKVTKVEDN-------------------------KMYVTQVD-EKGETIKEMVLPVKFGMMIPAFKGVPAVAGV---- 276 (437)
T ss_dssp CSEEEEEEETT-------------------------EEEEEEEC-TTSCEEEEEEEECSEEEEECCEECCHHHHTS----
T ss_pred cCCEEEEEECC-------------------------eEEEEecc-cCCccccceEEEEeEEEEcCCCcCchhhhcc----
Confidence 99999999863 33333210 0110 2678999999999999987433221
Q ss_pred cCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCC----CCCchHHHHHHHHHHHHHHHHHHCCCCCCCcccC
Q 010331 360 LHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRP----LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQ 435 (513)
Q Consensus 360 ~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~----~~~~a~~A~~qg~~~a~ni~~~l~~~~~~~f~~~ 435 (513)
.++ .+++|+|.||+++|++++|||||+|||+..+++++.+ .|++++.|++||+++|+||.+.+.|+++.+|.+.
T Consensus 277 -~gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~~~~~~ 354 (437)
T 3sx6_A 277 -EGL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQTMGT 354 (437)
T ss_dssp -TTT-BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCCCCCCS
T ss_pred -ccc-cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC
Confidence 244 6789999999999998999999999999987655444 5789999999999999999999999998887766
Q ss_pred Cc-eeEEEecCCCeeec--C---CccCCeEEccHHHHHHHHHhHhhcC
Q 010331 436 NL-GEMMILGRNDAAVS--P---SFVEGVTLDGPIGHSARKLAYLIRL 477 (513)
Q Consensus 436 ~~-g~~~~lG~~~~~~~--~---~~~~~~~~~G~~~~~~k~~~~~~~~ 477 (513)
.. .+++++|++.++.. + +...++.+.|.+.|++|..+..++|
T Consensus 355 ~~~~~~~~~G~~~~~~~~~~~~p~~~~~~~~~g~~~~~~K~~~~~~f~ 402 (437)
T 3sx6_A 355 WNAVAFADMGDRGAAFIALPQLKPRKVDVFAYGRWVHLAKVAFEKYFI 402 (437)
T ss_dssp CCEEEEEECSSCEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHH
T ss_pred cceEEEEEeCCCceEEEeCCCCCCcccccccccHHHHHHHHHHHHHHH
Confidence 54 35667998766541 1 1234578999999999998765554
No 4
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=5.8e-42 Score=352.71 Aligned_cols=302 Identities=19% Similarity=0.212 Sum_probs=243.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEEe
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (513)
.|||||||||+||++||.+|++.+ .+.+|||||++++|+++|+++.++.|..+.+++..+++.+. +.+++|++++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~----~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~-~~gv~~i~~~ 76 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLAD----PSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLR-AHGIQVVHDS 76 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC----TTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHH-HTTCEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhcC----cCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHH-HCCCEEEEeE
Confidence 479999999999999999998864 56899999999999999999999999888888887777665 5799999999
Q ss_pred EEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCcccc-----CCCCCCHHHHHHHHHHHHH
Q 010331 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEF-----AFPFSTLEDACRVDRKLSE 233 (513)
Q Consensus 159 V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~-----~~~~~~~~~a~~l~~~l~~ 233 (513)
|+.||++++ .|.+++|.+++||+||||||++++++.+||+.+. .+.+++.+++..+++.+..
T Consensus 77 v~~id~~~~-------------~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (401)
T 3vrd_B 77 ALGIDPDKK-------------LVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLES 143 (401)
T ss_dssp EEEEETTTT-------------EEEETTSCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHH
T ss_pred EEEEEccCc-------------EEEecccceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHh
Confidence 999999887 5888999999999999999999999999997653 3557788899888888765
Q ss_pred HHhhh---H---------------------HHHHh---cCcEEEEeccCeec--CCCChhHHHHHHHHHHhCCcEEEcCc
Q 010331 234 LERRN---F---------------------ERLEE---KGIVQAINVETTIC--PTGTPGNREAALKVLSARKVQLVLGY 284 (513)
Q Consensus 234 ~~~~~---v---------------------~~l~~---~~~vtli~~~~~ll--~~~~~~~~~~~~~~l~~~gV~v~~~~ 284 (513)
+.... + ..++. ..+|++++..+.+. +.+++.+.+.+.+.+++.||++++++
T Consensus 144 ~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~ 223 (401)
T 3vrd_B 144 MDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGP 223 (401)
T ss_dssp SCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTT
T ss_pred cccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCc
Confidence 43211 0 22222 23588888776652 22344455555566788999999999
Q ss_pred eeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCc
Q 010331 285 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLP 364 (513)
Q Consensus 285 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~ 364 (513)
.+..++.+. +...+++. +|+++++|+++|++|.+|+ +++... ++
T Consensus 224 ~v~~v~~~~-----------------------~~~~v~~~------~g~~i~~D~vi~~~g~~~~-~~~~~~-----gl- 267 (401)
T 3vrd_B 224 DAAVVKTDT-----------------------EAMTVETS------FGETFKAAVINLIPPQRAG-KIAQSA-----SL- 267 (401)
T ss_dssp TTCEEEEET-----------------------TTTEEEET------TSCEEECSEEEECCCEEEC-HHHHHT-----TC-
T ss_pred eEEEEEecc-----------------------cceEEEcC------CCcEEEeeEEEEecCcCCc-hhHhhc-----cc-
Confidence 998887654 23334442 7889999999999999998 565543 44
Q ss_pred cCCCCCeEeCCC-ccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCCCCCcccCCcee
Q 010331 365 LNARGQAETDET-LCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGE 439 (513)
Q Consensus 365 ~~~~G~i~Vd~~-l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~~~~f~~~~~g~ 439 (513)
.+++|+|.||++ ||++++|||||+|||+.. .|.|++++.|.+||+++|+||.+.++|+++.|+.|..+.+
T Consensus 268 ~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~-----~~~pk~a~~A~~qa~v~A~ni~~~l~G~~~~~~~y~~~~~ 338 (401)
T 3vrd_B 268 TNDSGWCPVDIRTFESSLQPGIHVIGDACNA-----APMPKSAYSANSQAKVAAAAVVALLKGEEPGTPSYLNTCY 338 (401)
T ss_dssp CCTTSSBCBCTTTCBBSSSTTEEECGGGBCC-----TTSCBSHHHHHHHHHHHHHHHHHHHHTCCCCCCCEEEEEE
T ss_pred cccCCCEEECCCcceecCCCCEEEecccccC-----CCCCchHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCeEE
Confidence 578999999975 888899999999999874 2568999999999999999999999999888888876643
No 5
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=1.3e-39 Score=338.15 Aligned_cols=351 Identities=20% Similarity=0.257 Sum_probs=271.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEEe
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (513)
+++|||||||+||+++|..|++++ .+++|+|||+++++.+.|.++.+..+....+++...+.+++++.+++++.++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~----~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~ 77 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLM----PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEK 77 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHC----TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSC
T ss_pred CCCEEEECccHHHHHHHHHHHcCC----CCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEE
Confidence 479999999999999999999842 5679999999999999999988888888888888888888888999999999
Q ss_pred EEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHh--
Q 010331 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELER-- 236 (513)
Q Consensus 159 V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~-- 236 (513)
|+.++++.+ .|.++++.++.||+||+|||++++.+++. ...+...+.+.+++..+++.+..+..
T Consensus 78 v~~id~~~~-------------~v~~~~g~~i~~d~liiAtG~~~~~pg~~-~~g~~~~~~~~~~a~~~~~~~~~~~~~~ 143 (430)
T 3h28_A 78 AESIDPDAN-------------TVTTQSGKKIEYDYLVIATGPKLVFGAEG-QEENSTSICTAEHALETQKKLQELYANP 143 (430)
T ss_dssp EEEEETTTT-------------EEEETTCCEEECSEEEECCCCEEECCSBT-HHHHSCCCSSHHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCC-------------EEEECCCcEEECCEEEEcCCcccccCCCC-CcCCccCcCCHHHHHHHHHHHHHHHhcC
Confidence 999998765 47888888899999999999997655322 12355678889999888776654311
Q ss_pred -hh--------------H-------HHHHhcC-----cEEEEeccCeec----CCCChhHHHHHHHHHHhCCcEEEcCce
Q 010331 237 -RN--------------F-------ERLEEKG-----IVQAINVETTIC----PTGTPGNREAALKVLSARKVQLVLGYF 285 (513)
Q Consensus 237 -~~--------------v-------~~l~~~~-----~vtli~~~~~ll----~~~~~~~~~~~~~~l~~~gV~v~~~~~ 285 (513)
.. + ..+.+.+ .|++++..+.+. +.. +...+.+.+.++++||++++++.
T Consensus 144 ~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~-~~~~~~l~~~l~~~GV~i~~~~~ 222 (430)
T 3h28_A 144 GPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGI-GASKRLVEDLFAERNIDWIANVA 222 (430)
T ss_dssp CCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCS-TTHHHHHHHHHHHTTCEEECSCE
T ss_pred CeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcc-hHHHHHHHHHHHHCCCEEEeCCE
Confidence 00 1 2233333 589999877662 222 34678888999999999999999
Q ss_pred eeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCcc
Q 010331 286 VRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPL 365 (513)
Q Consensus 286 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~ 365 (513)
|++++. +.+.++.. . ++++++++|.|++++|++|+ +++...+ .++ .
T Consensus 223 v~~v~~-------------------------~~v~~~~~---~-~~g~~i~~D~vv~a~G~~~~-~~l~~~~---~gl-~ 268 (430)
T 3h28_A 223 VKAIEP-------------------------DKVIYEDL---N-GNTHEVPAKFTMFMPSFQGP-EVVASAG---DKV-A 268 (430)
T ss_dssp EEEECS-------------------------SEEEEECT---T-SCEEEEECSEEEEECEEECC-HHHHTTC---TTT-B
T ss_pred EEEEeC-------------------------CeEEEEec---C-CCceEEeeeEEEECCCCccc-hhHhhcc---ccC-c
Confidence 999976 33344310 0 24789999999999999987 4443310 245 6
Q ss_pred CCCC-CeEeCCCccccCCCCEEEEcccccccCCCCCC----CCCchHHHHHHHHHHHHHHHHHHCCCCCCCcccCCce-e
Q 010331 366 NARG-QAETDETLCVKGHPRIFALGDSSALRDSSGRP----LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLG-E 439 (513)
Q Consensus 366 ~~~G-~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~----~~~~a~~A~~qg~~~a~ni~~~l~~~~~~~f~~~~~g-~ 439 (513)
+++| +|.||+++|++++|||||+|||+..+++++.+ .|++++.|++||+++|+||.+.+.|+++. +.++... +
T Consensus 269 ~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~~~-~~~~~~~~~ 347 (430)
T 3h28_A 269 NPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDK-YAPRLSAIC 347 (430)
T ss_dssp CTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCC-EEECCCEEE
T ss_pred CCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCC-CcCCcceEE
Confidence 7889 99999999998999999999999987654443 47899999999999999999999998864 5665544 5
Q ss_pred EEEecCCCeeec--C---CccCCeEEccHHHHHHHHHhHhhcCCCcchh
Q 010331 440 MMILGRNDAAVS--P---SFVEGVTLDGPIGHSARKLAYLIRLPTDEHR 483 (513)
Q Consensus 440 ~~~lG~~~~~~~--~---~~~~~~~~~G~~~~~~k~~~~~~~~~~~~~~ 483 (513)
++.+|+..++.. + +....+.+.|.+.|++|..+..++|-.+++-
T Consensus 348 ~~~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~K~~~~~~~~~~~~~~ 396 (430)
T 3h28_A 348 IADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNG 396 (430)
T ss_dssp EEECSSSEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCCceEEEeCCCCCCccceeecccHHHHHHHHHHHHHHHHHhccC
Confidence 566998766542 1 1234578999999999999877777555544
No 6
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=4.1e-37 Score=319.50 Aligned_cols=290 Identities=18% Similarity=0.239 Sum_probs=227.3
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC-CchhhhhhccccCCc--chHhHHHHhcCCCeEEEE
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-PMLYELLSGEVDAWE--IAPRFADLLANTGVQFFK 156 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~-p~~~~~~~g~~~~~~--~~~~~~~~~~~~~v~~~~ 156 (513)
+||||||||+||++||.+|++++ .+.+|+|||+++++.|. +.++.++.+...... +.....+++++.+++++.
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g----~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLD----KESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKT 76 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHC----SSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCC----CCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEe
Confidence 58999999999999999999875 45799999999987775 456655555433222 333445666777999877
Q ss_pred E-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHH
Q 010331 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELE 235 (513)
Q Consensus 157 ~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~ 235 (513)
+ +|+.||++.+. +.+. .....++.++.||+||||||++|+.|++|| ++.+.+++.+++..++..+...+
T Consensus 77 ~~~V~~id~~~~~------~~~~--~~~~~~~~~~~yd~lVIATGs~p~~p~i~g--~~~~~~~~~~~~~~l~~~~~~~~ 146 (437)
T 4eqs_A 77 YHEVIAINDERQT------VSVL--NRKTNEQFEESYDKLILSPGASANSLGFES--DITFTLRNLEDTDAIDQFIKANQ 146 (437)
T ss_dssp TEEEEEEETTTTE------EEEE--ETTTTEEEEEECSEEEECCCEEECCCCCCC--TTEECCSSHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEccCcE------EEEE--eccCCceEEEEcCEEEECCCCccccccccC--ceEEeeccHHHHHHHHHhhhccC
Confidence 5 89999987762 1110 001233457899999999999999999988 45567889999988887765443
Q ss_pred --hhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccC
Q 010331 236 --RRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQ 301 (513)
Q Consensus 236 --~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~ 301 (513)
+..+ ..+...+ .|+++++.+++++..++...+.+.+.++++||++++++.+.+++.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~---------- 216 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAING---------- 216 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEET----------
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEEEecC----------
Confidence 1221 3334444 599999999999999999999999999999999999999998876
Q ss_pred CCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccC
Q 010331 302 PESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKG 381 (513)
Q Consensus 302 ~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~ 381 (513)
..+.++ +++++++|.|++|+|.+||+++++. .|++++++|+|.||+++|+ +
T Consensus 217 ---------------~~v~~~--------~g~~~~~D~vl~a~G~~Pn~~~~~~-----~gl~~~~~G~I~vd~~~~T-s 267 (437)
T 4eqs_A 217 ---------------NEITFK--------SGKVEHYDMIIEGVGTHPNSKFIES-----SNIKLDRKGFIPVNDKFET-N 267 (437)
T ss_dssp ---------------TEEEET--------TSCEEECSEEEECCCEEESCGGGTT-----SSCCCCTTSCEECCTTCBC-S
T ss_pred ---------------Ceeeec--------CCeEEeeeeEEEEeceecCcHHHHh-----hhhhhccCCcEecCCCccC-C
Confidence 334342 7889999999999999999987764 4688899999999999998 8
Q ss_pred CCCEEEEcccccccCC-CCC-CCCCchHHHHHHHHHHHHHHHH
Q 010331 382 HPRIFALGDSSALRDS-SGR-PLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 382 ~p~VfaiGD~a~~~~~-~g~-~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
.|||||+|||+..++. .+. ..+++++.|.+||+++|+||.+
T Consensus 268 ~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g 310 (437)
T 4eqs_A 268 VPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAG 310 (437)
T ss_dssp STTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcC
Confidence 9999999999988664 222 3468899999999999999976
No 7
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.8e-37 Score=316.68 Aligned_cols=296 Identities=17% Similarity=0.255 Sum_probs=240.6
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc-CCchhhhhhccccCCcchHhHHHHhcCCCeEEEE
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF-KPMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~-~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (513)
+++||||||||+||++||..|.+ .+.+|+|||+++++.| .|.++.++.+..+.+++.....+++++.+++++.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~------~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~ 81 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALG------KCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVIT 81 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTT------TCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEEC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhC------CCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEe
Confidence 46799999999999999999944 6779999999998766 7788888888877778877778888889999998
Q ss_pred E-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHH
Q 010331 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELE 235 (513)
Q Consensus 157 ~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~ 235 (513)
+ +|+.||++.+ .|.+++|+++.||+||||||++|+.|++||.. +.+.+++.+++..++..+...+
T Consensus 82 ~~~V~~id~~~~-------------~v~~~~g~~~~yd~lvlAtG~~p~~p~i~G~~-~v~~~~~~~d~~~l~~~l~~~~ 147 (385)
T 3klj_A 82 SEFATSIDPNNK-------------LVTLKSGEKIKYEKLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDECKNKG 147 (385)
T ss_dssp SCCEEEEETTTT-------------EEEETTSCEEECSEEEECCCEEECCCCCTTCS-CEECCSSHHHHHHHHHHHHHHS
T ss_pred CCEEEEEECCCC-------------EEEECCCCEEECCEEEEecCCCcCCCCCCCCC-CeEEeCCHHHHHHHHHHhhcCC
Confidence 7 8999998876 58888998999999999999999999999987 7788899999999888776555
Q ss_pred hhhH-----------HHHHhcC-cEEEEeccCeecCC-CChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCC
Q 010331 236 RRNF-----------ERLEEKG-IVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQP 302 (513)
Q Consensus 236 ~~~v-----------~~l~~~~-~vtli~~~~~ll~~-~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~ 302 (513)
+.++ ..+...+ .|+++++.+.+++. +++...+.+.+.+++.||++++++.+.++
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i------------- 214 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM------------- 214 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC-------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc-------------
Confidence 4433 3444444 59999999999887 78999999999999999999999877544
Q ss_pred CcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCC
Q 010331 303 ESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGH 382 (513)
Q Consensus 303 ~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~ 382 (513)
+++++||.||+|+|++|+++++... +++.+ +| |.||+++++ +.
T Consensus 215 -----------------------------g~~~~~D~vv~a~G~~p~~~~~~~~-----gl~~~-~g-i~vd~~~~t-~~ 257 (385)
T 3klj_A 215 -----------------------------GDLIRSSCVITAVGVKPNLDFIKDT-----EIASK-RG-ILVNDHMET-SI 257 (385)
T ss_dssp -----------------------------HHHHHHSEEEECCCEEECCGGGTTS-----CCCBS-SS-EEECTTCBC-SS
T ss_pred -----------------------------CeEEecCeEEECcCcccChhhhhhc-----CCCcC-CC-EEECCCccc-CC
Confidence 2357799999999999999887653 45555 45 999999999 89
Q ss_pred CCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCC-CCCcccCC-ce-eEEEecCCC
Q 010331 383 PRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP-LLPFRFQN-LG-EMMILGRND 447 (513)
Q Consensus 383 p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~-~~~f~~~~-~g-~~~~lG~~~ 447 (513)
|+|||+|||+..++ +.++++..|.+||+++|+||.+...... ..|+.+.. ++ .+.++|...
T Consensus 258 ~~IyA~GD~a~~~~----~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 321 (385)
T 3klj_A 258 KDIYACGDVAEFYG----KNPGLINIANKQGEVAGLNACGEDASYSEIIPSPILKVSGISIISCGDIE 321 (385)
T ss_dssp TTEEECGGGEEETT----BCCCCHHHHHHHHHHHHHHHTTCCCCCCCCCCCCEEEETTEEEEEESCCT
T ss_pred CCEEEEEeeEecCC----CcccHHHHHHHHHHHHHHHhcCCCcCCCCCCCcEEEEeCCCcEEEEcCCC
Confidence 99999999998743 2467899999999999999986432222 13444332 33 577888544
No 8
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=4.1e-37 Score=317.38 Aligned_cols=296 Identities=21% Similarity=0.337 Sum_probs=240.6
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEEeE
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDRV 159 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~V 159 (513)
++|||||||+||+++|..|++... .+.+|+|||+++++.+.|.++....+....+++...+.+.+++.+++++.++|
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~---~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v 78 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG---SKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTV 78 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG---GGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEECEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC---CCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEeeE
Confidence 689999999999999999998211 35599999999999999988887778888888999999999889999999999
Q ss_pred EEEeCCCCcCcCCCceeeccceEecCCce----EEEecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHH
Q 010331 160 KLLCPSDHLGVNGPMACTHGGTVLLESGL----IVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELE 235 (513)
Q Consensus 160 ~~id~~~~~~~~~~~v~~~~~~v~~~~g~----~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~ 235 (513)
+.++++.+ .|.++++. +++||+||+|||++++.+.+||+.++.+.+.+.+++..+++.+....
T Consensus 79 ~~i~~~~~-------------~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~~ 145 (409)
T 3h8l_A 79 EKIDAKSS-------------MVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESFQ 145 (409)
T ss_dssp EEEETTTT-------------EEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHCC
T ss_pred EEEeCCCC-------------EEEEccCCcccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHhc
Confidence 99988765 35555553 49999999999999998899998776666777888888887665431
Q ss_pred -h------h---------------------------hH-------HHHHhcC-----cEEEEeccCeecCCCChhHHHHH
Q 010331 236 -R------R---------------------------NF-------ERLEEKG-----IVQAINVETTICPTGTPGNREAA 269 (513)
Q Consensus 236 -~------~---------------------------~v-------~~l~~~~-----~vtli~~~~~ll~~~~~~~~~~~ 269 (513)
+ . .+ ..+.+.+ .|+++++.. +++..++...+.+
T Consensus 146 ~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~~~~~~~~~~~ 224 (409)
T 3h8l_A 146 GGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSDLSPNSRKAV 224 (409)
T ss_dssp SEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SSTTBCHHHHHHH
T ss_pred CCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cccccCHHHHHHH
Confidence 0 0 01 2344444 699999887 7788888999999
Q ss_pred HHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCC
Q 010331 270 LKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPL 349 (513)
Q Consensus 270 ~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~ 349 (513)
.+.+++.||++++++.|++++. +.+.++ +|+++++|+||+++|+.|+
T Consensus 225 ~~~l~~~gV~~~~~~~v~~i~~-------------------------~~v~~~--------~g~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 225 ASIYNQLGIKLVHNFKIKEIRE-------------------------HEIVDE--------KGNTIPADITILLPPYTGN 271 (409)
T ss_dssp HHHHHHHTCEEECSCCEEEECS-------------------------SEEEET--------TSCEEECSEEEEECCEECC
T ss_pred HHHHHHCCCEEEcCCceEEECC-------------------------CeEEEC--------CCCEEeeeEEEECCCCCcc
Confidence 9999999999999999999976 334332 6789999999999999998
Q ss_pred CCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHC-CCC
Q 010331 350 LPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN-DRP 428 (513)
Q Consensus 350 ~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~-~~~ 428 (513)
+++...+ .++ .+++|+|.||+++|++++|||||+|||+.. +.|+++..|..||+++|+||.+.+. +.+
T Consensus 272 -~~l~~~~---~~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~------~~~~~~~~A~~q~~~aa~~i~~~l~~~~~ 340 (409)
T 3h8l_A 272 -PALKNST---PDL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSM------TVPKLGYLAVMTGRIAAQHLANRLGVPTK 340 (409)
T ss_dssp -HHHHTSC---GGG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTT------CCSCCHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred -HHHHhcc---ccC-cCCCCCEEeCcccccCCCCCEEEeehhccC------CCCcHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 5655431 123 467899999999999899999999999986 3489999999999999999999994 445
Q ss_pred CCCcccCC
Q 010331 429 LLPFRFQN 436 (513)
Q Consensus 429 ~~~f~~~~ 436 (513)
..+|.+..
T Consensus 341 ~~~~~~~~ 348 (409)
T 3h8l_A 341 VDKYYPTI 348 (409)
T ss_dssp CCCCCCCC
T ss_pred ccccCCEE
Confidence 56676543
No 9
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=2.4e-37 Score=318.99 Aligned_cols=313 Identities=20% Similarity=0.241 Sum_probs=242.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC--CchhhhhhccccCCcchHhHHHHhcCCCeEEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK--PMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~--p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (513)
+++|||||||+||++||..|++.++ ..+|+|||+++++.|. ++...++.+....+++ ....+++++.+++++.
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~----~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~ 76 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGF----EGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEARIDMLT 76 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC----CSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCEEEE
T ss_pred CCCEEEEcccHHHHHHHHHHHccCc----CCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCCCEEEe
Confidence 4699999999999999999999653 3469999999988774 3455577777777666 5556677778999999
Q ss_pred E-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCcc-ccCCCCCCHHHHHHHHHHHHHH
Q 010331 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSEL 234 (513)
Q Consensus 157 ~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~~ 234 (513)
+ +|+.++++.+ .|.+++|.++.||+||||||++++.|++||.. ++.+.+++.+++..++..+...
T Consensus 77 ~~~v~~id~~~~-------------~v~~~~g~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~ 143 (410)
T 3ef6_A 77 GPEVTALDVQTR-------------TISLDDGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSA 143 (410)
T ss_dssp SCCEEEEETTTT-------------EEEETTSCEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHCCTT
T ss_pred CCEEEEEECCCC-------------EEEECCCCEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHhccC
Confidence 8 9999998776 58888888999999999999999999999975 5667788999988887654322
Q ss_pred HhhhH-----------HHHHhcC-cEEEEeccCeecCC-CChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccC
Q 010331 235 ERRNF-----------ERLEEKG-IVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQ 301 (513)
Q Consensus 235 ~~~~v-----------~~l~~~~-~vtli~~~~~ll~~-~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~ 301 (513)
++..+ ..+...+ .|+++++.+.+++. +++.+.+.+.+.++++||++++++.+.++..++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-------- 215 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEG-------- 215 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSS--------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccC--------
Confidence 22222 3344444 59999998888764 678888999999999999999999999998743
Q ss_pred CCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccC
Q 010331 302 PESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKG 381 (513)
Q Consensus 302 ~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~ 381 (513)
....+++. +|++++||.||+|+|.+|+++++.. .+++.+ +| |.||+++++ +
T Consensus 216 ---------------~~~~v~~~------dg~~i~aD~Vv~a~G~~p~~~l~~~-----~gl~~~-~g-i~vd~~~~t-~ 266 (410)
T 3ef6_A 216 ---------------QLEQVMAS------DGRSFVADSALICVGAEPADQLARQ-----AGLACD-RG-VIVDHCGAT-L 266 (410)
T ss_dssp ---------------SCCEEEET------TSCEEECSEEEECSCEEECCHHHHH-----TTCCBS-SS-EECCTTSBC-S
T ss_pred ---------------cEEEEEEC------CCCEEEcCEEEEeeCCeecHHHHHh-----CCCccC-Ce-EEEccCeeE-C
Confidence 12224432 7789999999999999999877653 356666 45 999999998 8
Q ss_pred CCCEEEEcccccccCCCCC-CCCCchHHHHHHHHHHHHHHHHHHCCCCCCCcccCCc-e-eEEEecCC
Q 010331 382 HPRIFALGDSSALRDSSGR-PLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNL-G-EMMILGRN 446 (513)
Q Consensus 382 ~p~VfaiGD~a~~~~~~g~-~~~~~a~~A~~qg~~~a~ni~~~l~~~~~~~f~~~~~-g-~~~~lG~~ 446 (513)
.|+|||+|||+..+++.|. ..+++++.|..||+++|+||.+.....+..||.+... | .+.++|..
T Consensus 267 ~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~~~~~~~~~~~G~~ 334 (410)
T 3ef6_A 267 AKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKNVSAPQLPVSWTEIAGHRMQMAGDI 334 (410)
T ss_dssp STTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCCCCCCBCCEEEEEETTEEEEEESCS
T ss_pred CCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCCCCCCCCCeeEEEECCceEEEEcCC
Confidence 9999999999998654222 2356789999999999999987543344456666543 3 45666643
No 10
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2.2e-36 Score=312.41 Aligned_cols=315 Identities=23% Similarity=0.292 Sum_probs=245.2
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC--CchhhhhhccccCCcchHhHHHHhcCCCeEEE
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK--PMLYELLSGEVDAWEIAPRFADLLANTGVQFF 155 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~--p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 155 (513)
++++|||||||+||++||..|++.++ ..+|+|||+++++.|. ++...++.+.....++.....+++.+.+++++
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~----~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 83 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGF----EGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMK 83 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC----CSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCc----CCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEE
Confidence 35799999999999999999999653 3469999999987664 34446666666666666666777778899999
Q ss_pred EE-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCcc-ccCCCCCCHHHHHHHHHHHHH
Q 010331 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSE 233 (513)
Q Consensus 156 ~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~ 233 (513)
.+ +|+.++++.+ .|.++++.++.||+||+|||++++.+++||.. ++.+.+++.+++..++..+..
T Consensus 84 ~~~~v~~id~~~~-------------~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~ 150 (415)
T 3lxd_A 84 LGAEVVSLDPAAH-------------TVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDA 150 (415)
T ss_dssp ETCCEEEEETTTT-------------EEEETTSCEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHHT
T ss_pred eCCEEEEEECCCC-------------EEEECCCCEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhhh
Confidence 98 9999998876 58888888999999999999999999999974 556778899999888776643
Q ss_pred -HHhhhH-----------HHHHhcC-cEEEEeccCeecCC-CChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccc
Q 010331 234 -LERRNF-----------ERLEEKG-IVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASV 299 (513)
Q Consensus 234 -~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~-~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~ 299 (513)
.++..+ ..+...+ .|+++++.+.+++. .++.+.+.+.+.++++||++++++.|.++..++
T Consensus 151 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~------ 224 (415)
T 3lxd_A 151 GAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG------ 224 (415)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESS------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecC------
Confidence 222222 3344444 59999999988875 688889999999999999999999999998743
Q ss_pred cCCCcccccccccccCCCce-EEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCcc
Q 010331 300 KQPESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLC 378 (513)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~v-~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~ 378 (513)
+.+ .+++. +|++++||.||+|+|.+|+++++.. .+++.+ +| |.||++++
T Consensus 225 -----------------~~v~~v~l~------dG~~i~aD~Vv~a~G~~p~~~l~~~-----~gl~~~-~g-i~vd~~~~ 274 (415)
T 3lxd_A 225 -----------------TKVTGVRMQ------DGSVIPADIVIVGIGIVPCVGALIS-----AGASGG-NG-VDVDEFCR 274 (415)
T ss_dssp -----------------SBEEEEEES------SSCEEECSEEEECSCCEESCHHHHH-----TTCCCS-SS-EECCTTCB
T ss_pred -----------------CcEEEEEeC------CCCEEEcCEEEECCCCccChHHHHh-----CCCCcC-CC-EEECCCCC
Confidence 222 34443 7789999999999999999877654 356665 45 99999999
Q ss_pred ccCCCCEEEEcccccccCC-C-CC-CCCCchHHHHHHHHHHHHHHHHHHCCCCCCCcccCCc-e-eEEEecCC
Q 010331 379 VKGHPRIFALGDSSALRDS-S-GR-PLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNL-G-EMMILGRN 446 (513)
Q Consensus 379 ~~~~p~VfaiGD~a~~~~~-~-g~-~~~~~a~~A~~qg~~~a~ni~~~l~~~~~~~f~~~~~-g-~~~~lG~~ 446 (513)
+ +.|+|||+|||+..+++ . |. ..+.+++.|.+||+++|+||.+.-...+..||.|.++ + .+.++|..
T Consensus 275 t-~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~~~~~~~~~~~G~~ 346 (415)
T 3lxd_A 275 T-SLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAPVPYKATPWFWSNQYDLKLQTVGLS 346 (415)
T ss_dssp C-SSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCCCCCCCCCEEEEEETTEEEEEEECC
T ss_pred c-CCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCCCCCCCCCeeEeeeCCcEEEEEeCC
Confidence 9 89999999999998653 1 32 2245789999999999999987543344467766544 3 45666744
No 11
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.1e-36 Score=307.07 Aligned_cols=300 Identities=20% Similarity=0.283 Sum_probs=232.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc-CCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF-KPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~-~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (513)
..+|||||||+||++||..|++ .+ +|+|||++++..| .++++..+.+..+.+++.....+++++.+++++.+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~------~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g 80 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ------TY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLA 80 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT------TS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECS
T ss_pred CCcEEEECCcHHHHHHHHHHhh------cC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEEC
Confidence 4699999999999999999987 45 9999999987554 57777777777666666666677777889999988
Q ss_pred -eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHh
Q 010331 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELER 236 (513)
Q Consensus 158 -~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~ 236 (513)
+|+.++++.+ .|. .++++++||+||||||++|+.|++|| .++.+.+++.+++..+++.+...++
T Consensus 81 ~~v~~id~~~~-------------~V~-~~g~~~~~d~lViATGs~p~~p~i~G-~~~v~~~~~~~~~~~l~~~~~~~~~ 145 (367)
T 1xhc_A 81 EEAKLIDRGRK-------------VVI-TEKGEVPYDTLVLATGARAREPQIKG-KEYLLTLRTIFDADRIKESIENSGE 145 (367)
T ss_dssp CCEEEEETTTT-------------EEE-ESSCEEECSEEEECCCEEECCCCSBT-GGGEECCCSHHHHHHHHHHHHHHSE
T ss_pred CEEEEEECCCC-------------EEE-ECCcEEECCEEEECCCCCCCCCCCCC-cCCEEEEcCHHHHHHHHHHhhcCCc
Confidence 6999988765 466 56778999999999999999999999 5667778899998888776644343
Q ss_pred hhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCc
Q 010331 237 RNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPES 304 (513)
Q Consensus 237 ~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~ 304 (513)
..+ ..+...+ .|+++++.+.+++ +++.+.+.+.+.++++||++++++.+.+++.
T Consensus 146 vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~------------- 211 (367)
T 1xhc_A 146 AIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLNSELLEANE------------- 211 (367)
T ss_dssp EEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECSCCEEEECS-------------
T ss_pred EEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe-------------
Confidence 332 3444444 5999999999998 8999999999999999999999999998873
Q ss_pred ccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCC
Q 010331 305 GAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPR 384 (513)
Q Consensus 305 ~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~ 384 (513)
+.+.++ +|+ +++|.||+|+|.+||+++++. .+++.+ +| |.||+++|+ +.|+
T Consensus 212 ------------~~v~~~--------~g~-i~~D~vi~a~G~~p~~~ll~~-----~gl~~~-~g-i~Vd~~~~t-~~~~ 262 (367)
T 1xhc_A 212 ------------EGVLTN--------SGF-IEGKVKICAIGIVPNVDLARR-----SGIHTG-RG-ILIDDNFRT-SAKD 262 (367)
T ss_dssp ------------SEEEET--------TEE-EECSCEEEECCEEECCHHHHH-----TTCCBS-SS-EECCTTSBC-SSTT
T ss_pred ------------eEEEEC--------CCE-EEcCEEEECcCCCcCHHHHHh-----CCCCCC-CC-EEECCCccc-CCCC
Confidence 333332 566 999999999999999876543 356665 45 999999998 8999
Q ss_pred EEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCC-CCCCc---ccCCceeEEEecCCCe
Q 010331 385 IFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR-PLLPF---RFQNLGEMMILGRNDA 448 (513)
Q Consensus 385 VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~-~~~~f---~~~~~g~~~~lG~~~~ 448 (513)
|||+|||+.... ..++++..|.+||+++|+||.+..... ...|+ .+.+. .+.++|....
T Consensus 263 IyA~GD~a~~~~----~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~-~~~~vG~~~~ 325 (367)
T 1xhc_A 263 VYAIGDCAEYSG----IIAGTAKAAMEQARVLADILKGEPRRYNFKFRSTVFKFGKL-QIAIIGNTKG 325 (367)
T ss_dssp EEECGGGEEBTT----BCCCSHHHHHHHHHHHHHHHTTCCCCCCSSCCEEEEEETTE-EEEEEECCSS
T ss_pred EEEeEeeeecCC----CCccHHHHHHHHHHHHHHHhcCCCccCCCCCCceEEEECCc-eEEEECCCCC
Confidence 999999997632 225789999999999999997532111 11222 12222 6777885543
No 12
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=2.5e-36 Score=310.85 Aligned_cols=312 Identities=21% Similarity=0.310 Sum_probs=242.4
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC-C-chhhhhhccccCCcchHhHHHHhcCCCeEEEEE
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-P-MLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~-p-~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (513)
++|||||||+||++||..|++.++ +.+|+|||+++++.|. | +...++.+...+.++.....+++.+.+++++..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~----~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKY----PGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELISD 77 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC----CSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEECC
T ss_pred CCEEEEcChHHHHHHHHHHHhhCc----CCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEEE
Confidence 689999999999999999999643 3489999999977763 3 444677777677777777777788889999999
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCcc-ccCCCCCCHHHHHHHHHHHHHHHh
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSELER 236 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~~~~ 236 (513)
+|+.++++.+ .|.++++.++.||+||+|||++++.+++||.. ++.+.+++.+++..++..+...++
T Consensus 78 ~v~~id~~~~-------------~v~~~~g~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~ 144 (404)
T 3fg2_P 78 RMVSIDREGR-------------KLLLASGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPDKKH 144 (404)
T ss_dssp CEEEEETTTT-------------EEEESSSCEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHGGGCSE
T ss_pred EEEEEECCCC-------------EEEECCCCEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHhhcCCe
Confidence 9999998776 58888888999999999999999999999964 456778899998887776543332
Q ss_pred hhH-----------HHHHhcC-cEEEEeccCeecCC-CChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCC
Q 010331 237 RNF-----------ERLEEKG-IVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPE 303 (513)
Q Consensus 237 ~~v-----------~~l~~~~-~vtli~~~~~ll~~-~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~ 303 (513)
..+ ..+...+ .|+++++.+.+++. .++.+.+.+.+.+++.||++++++.|.++..++
T Consensus 145 vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---------- 214 (404)
T 3fg2_P 145 VVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEG---------- 214 (404)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEET----------
T ss_pred EEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecC----------
Confidence 222 3344444 59999999888875 688889999999999999999999999998743
Q ss_pred cccccccccccCCCce-EEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCC
Q 010331 304 SGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGH 382 (513)
Q Consensus 304 ~~~~~~~~~~~~~~~v-~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~ 382 (513)
+.+ .+.+. +|++++||.||+|+|.+|+++++.. .++..+ +| |.||+++++ +.
T Consensus 215 -------------~~v~~V~~~------dG~~i~aD~Vv~a~G~~p~~~l~~~-----~gl~~~-~G-i~vd~~~~t-~~ 267 (404)
T 3fg2_P 215 -------------DRVTGVVLS------DGNTLPCDLVVVGVGVIPNVEIAAA-----AGLPTA-AG-IIVDQQLLT-SD 267 (404)
T ss_dssp -------------TEEEEEEET------TSCEEECSEEEECCCEEECCHHHHH-----TTCCBS-SS-EEECTTSBC-SS
T ss_pred -------------CcEEEEEeC------CCCEEEcCEEEECcCCccCHHHHHh-----CCCCCC-CC-EEECCCccc-CC
Confidence 222 24443 7789999999999999999877654 356666 46 999999998 89
Q ss_pred CCEEEEcccccccCC-CCCC-CCCchHHHHHHHHHHHHHHHHHHCCCCCCCcccCCc-e-eEEEecC
Q 010331 383 PRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNL-G-EMMILGR 445 (513)
Q Consensus 383 p~VfaiGD~a~~~~~-~g~~-~~~~a~~A~~qg~~~a~ni~~~l~~~~~~~f~~~~~-g-~~~~lG~ 445 (513)
|+|||+|||+..+++ .|.+ ...+++.|..||+++|+||.+.-...+..||.|.++ + .+.++|.
T Consensus 268 ~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~~~~~~~~~~~G~ 334 (404)
T 3fg2_P 268 PHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDAKPYDGYPWFWSDQGDDKLQIVGL 334 (404)
T ss_dssp TTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCCCCCCCCCEEEEEETTEEEEEEEC
T ss_pred CCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCCCCCCCCCceEeEECCcEEEEEeC
Confidence 999999999998653 2222 245689999999999999986533334457766544 2 3555663
No 13
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=1.9e-35 Score=304.55 Aligned_cols=306 Identities=21% Similarity=0.228 Sum_probs=229.4
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC-Cc-hhhhhhccccCCcchHhHHHHhcCCCeEEE
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-PM-LYELLSGEVDAWEIAPRFADLLANTGVQFF 155 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~-p~-~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 155 (513)
++++|||||||+||+++|..|++.++ +.+|+|||+++++.|. +. ...++.+.. .+++... ++++.+++++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~----~~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~v~~~ 77 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGY----QGLITVVGDEAERPYDRPPLSKDFMAHGD-AEKIRLD---CKRAPEVEWL 77 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTC----CSCEEEEESSCSCCBCSGGGGTHHHHHCC-GGGSBCC---CTTSCSCEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCC----CCeEEEEECCCCCcccCCCCCHHHhCCCc-hhhhhHH---HHHHCCCEEE
Confidence 45799999999999999999999653 3479999999876654 33 334544433 2222222 5567899999
Q ss_pred EE-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCC-CCccccCCCCCCHHHHHHHHHHHHH
Q 010331 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVV-PGAAEFAFPFSTLEDACRVDRKLSE 233 (513)
Q Consensus 156 ~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~i-pG~~~~~~~~~~~~~a~~l~~~l~~ 233 (513)
.+ +|+.++++.+ .|.+++|.+++||+||+|||++++.|++ ||..++.+.+++.+++..+++.+..
T Consensus 78 ~~~~v~~i~~~~~-------------~v~~~~g~~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~~~ 144 (408)
T 2gqw_A 78 LGVTAQSFDPQAH-------------TVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRP 144 (408)
T ss_dssp ETCCEEEEETTTT-------------EEEETTSCEEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTCCT
T ss_pred cCCEEEEEECCCC-------------EEEECCCCEEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHhhc
Confidence 98 5999988765 5778888889999999999999998888 9976566677889888777654322
Q ss_pred HHhhhH-----------HHHHhcC-cEEEEeccCeecCC-CChhHHHHHHHHHHhCCcEEEcCceeeEEecccccccccc
Q 010331 234 LERRNF-----------ERLEEKG-IVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVK 300 (513)
Q Consensus 234 ~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~-~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~ 300 (513)
.++..+ ..+...+ .|+++++.+.+++. +++.+.+.+.+.++++||++++++.+.+++ +
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~-------- 215 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-D-------- 215 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T--------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--------
Confidence 222221 4444444 59999999999885 889999999999999999999999999987 2
Q ss_pred CCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCcccc
Q 010331 301 QPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVK 380 (513)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~ 380 (513)
+. +.+. +|++++||.||+|+|.+|++++++. .+++.+ +| |.||+++|+
T Consensus 216 ----------------~~--v~~~------~g~~i~~D~vi~a~G~~p~~~l~~~-----~gl~~~-~g-i~Vd~~~~t- 263 (408)
T 2gqw_A 216 ----------------GV--VLLD------DGTRIAADMVVVGIGVLANDALARA-----AGLACD-DG-IFVDAYGRT- 263 (408)
T ss_dssp ----------------TE--EEET------TSCEEECSEEEECSCEEECCHHHHH-----HTCCBS-SS-EECCTTCBC-
T ss_pred ----------------CE--EEEC------CCCEEEcCEEEECcCCCccHHHHHh-----CCCCCC-CC-EEECCCCcc-
Confidence 32 3332 6788999999999999999877653 356665 56 999999998
Q ss_pred CCCCEEEEcccccccCC-CCCCC-CCchHHHHHHHHHHHHHHHHHHC-CCCCCCcccCCc--eeEEEecC
Q 010331 381 GHPRIFALGDSSALRDS-SGRPL-PATAQVAFQQADFAGWNLWAAIN-DRPLLPFRFQNL--GEMMILGR 445 (513)
Q Consensus 381 ~~p~VfaiGD~a~~~~~-~g~~~-~~~a~~A~~qg~~~a~ni~~~l~-~~~~~~f~~~~~--g~~~~lG~ 445 (513)
+.|+|||+|||+..+.+ .|++. +.++..|.+||+++|+||.+... ..+..|+.+... ..+.++|.
T Consensus 264 ~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~p~~~~~~~~~~~~~~G~ 333 (408)
T 2gqw_A 264 TCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAPGYAELPWYWSDQGALRIQVAGL 333 (408)
T ss_dssp SSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTSCCCCCCCEEEEEETTEEEEEEEC
T ss_pred CCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCCCcCCCCCeEEEEECCceEEEECC
Confidence 89999999999987543 12221 35788999999999999987544 344456655442 24556664
No 14
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=1.3e-34 Score=300.30 Aligned_cols=313 Identities=21% Similarity=0.271 Sum_probs=230.5
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC-C-chhhhhhccccCCcchHhHHHHhcCCCeEEE
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-P-MLYELLSGEVDAWEIAPRFADLLANTGVQFF 155 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~-p-~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 155 (513)
+.++|||||||+||+++|..|++.++ +.+|+|||+++++.|. + +...++.+....+++.....+++++.+++++
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~----~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 78 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGW----EGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLL 78 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC----CSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEE
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCc----CCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEE
Confidence 35799999999999999999998542 3489999998876653 2 3333454544444444444566677899999
Q ss_pred EE-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCcc-cc---CCCCCCHHHHHHHHHH
Q 010331 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA-EF---AFPFSTLEDACRVDRK 230 (513)
Q Consensus 156 ~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~-~~---~~~~~~~~~a~~l~~~ 230 (513)
.+ +|+.++++.+ .|.+++|++++||+||+|||++++.+++||.. +. .+.+++.+++..+++.
T Consensus 79 ~~~~v~~i~~~~~-------------~v~~~~g~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~ 145 (431)
T 1q1r_A 79 GGTQVTAINRDRQ-------------QVILSDGRALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQ 145 (431)
T ss_dssp CSCCEEEEETTTT-------------EEEETTSCEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHT
T ss_pred eCCEEEEEECCCC-------------EEEECCCCEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHH
Confidence 86 7999987665 47778888899999999999999999999964 23 5667888888777664
Q ss_pred HHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCC-CChhHHHHHHHHHHhCCcEEEcCceeeEEec--cccc
Q 010331 231 LSELERRNF-----------ERLEEKG-IVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVRCIRR--VGEF 295 (513)
Q Consensus 231 l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~-~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~~~ 295 (513)
+...++..+ ..+...+ .|+++++.+.+++. +++.+.+.+.+.+++.||++++++.+.++.. ++
T Consensus 146 l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-- 223 (431)
T 1q1r_A 146 LIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ-- 223 (431)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT--
T ss_pred hhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC--
Confidence 422222221 3444444 59999999888875 7888888999999999999999999999976 32
Q ss_pred cccccCCCcccccccccccCCCce-EEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeC
Q 010331 296 EASVKQPESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETD 374 (513)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~v-~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd 374 (513)
+.+ .+.+. +|++++||.||+|+|.+|++++++. .+++++ +| |.||
T Consensus 224 ---------------------~~v~~v~~~------~G~~i~~D~Vv~a~G~~p~~~l~~~-----~gl~~~-~g-i~Vd 269 (431)
T 1q1r_A 224 ---------------------QKVTAVLCE------DGTRLPADLVIAGIGLIPNCELASA-----AGLQVD-NG-IVIN 269 (431)
T ss_dssp ---------------------CCEEEEEET------TSCEEECSEEEECCCEEECCHHHHH-----TTCCBS-SS-EECC
T ss_pred ---------------------CcEEEEEeC------CCCEEEcCEEEECCCCCcCcchhhc-----cCCCCC-CC-EEEC
Confidence 222 34432 6788999999999999999877653 356665 45 9999
Q ss_pred CCccccCCCCEEEEcccccccCCC-CCCC-CCchHHHHHHHHHHHHHHHHHHCCCCCCCcccCCc-e-eEEEec
Q 010331 375 ETLCVKGHPRIFALGDSSALRDSS-GRPL-PATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNL-G-EMMILG 444 (513)
Q Consensus 375 ~~l~~~~~p~VfaiGD~a~~~~~~-g~~~-~~~a~~A~~qg~~~a~ni~~~l~~~~~~~f~~~~~-g-~~~~lG 444 (513)
+++|+ +.|+|||+|||+..+.+. |.+. ..++..|.+||+++|.||.+.....+..|+.|... + .+.++|
T Consensus 270 ~~~~t-s~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~~~~~~~~~~~G 342 (431)
T 1q1r_A 270 EHMQT-SDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKVPRDEAAPWFWSDQYEIGLKMVG 342 (431)
T ss_dssp TTSBC-SSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCCCCCCCCCEEEEEETTEEEEEEE
T ss_pred CCccc-CCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCCCCCCCCCeEEEEECCceEEEEe
Confidence 99998 899999999999875431 2111 24678999999999999986433334456655432 2 344555
No 15
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=7.4e-34 Score=305.18 Aligned_cols=311 Identities=21% Similarity=0.293 Sum_probs=228.1
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-chhhhhhccccC-Cc-chHhHHHHhcCCCeEEEE
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLSGEVDA-WE-IAPRFADLLANTGVQFFK 156 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-~~~~~~~g~~~~-~~-~~~~~~~~~~~~~v~~~~ 156 (513)
++|||||||+||++||..|++.+ .+++|+|||+++++.|.+ .++....+.... .+ +......+.++.+++++.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~----~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 77 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLS----ETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRV 77 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC----SSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEET
T ss_pred CcEEEECCCHHHHHHHHHHHhhC----cCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEE
Confidence 68999999999999999999862 467999999999887765 455555554332 22 333444455557899874
Q ss_pred -EeEEEEeCCCCcCcCCCceeeccceEecC---Cc--eEEEecEEEEeCCCCCCCCCCCCcc-ccCCCCCCHHHHHHHHH
Q 010331 157 -DRVKLLCPSDHLGVNGPMACTHGGTVLLE---SG--LIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDR 229 (513)
Q Consensus 157 -~~V~~id~~~~~~~~~~~v~~~~~~v~~~---~g--~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~l~~ 229 (513)
.+|+.++++.+. +.+. ++ .++.||+||||||++++.|++||.. .+.+.+++..++..+.+
T Consensus 78 ~~~V~~id~~~~~-------------v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~ 144 (565)
T 3ntd_A 78 KHEVVAIDRAAKL-------------VTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQ 144 (565)
T ss_dssp TEEEEEEETTTTE-------------EEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHH
T ss_pred CCEEEEEECCCCE-------------EEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHH
Confidence 699999887662 3332 23 3789999999999999999999974 45667788888877776
Q ss_pred HHHHHH--hhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccc
Q 010331 230 KLSELE--RRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEF 295 (513)
Q Consensus 230 ~l~~~~--~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~ 295 (513)
.+.... +..+ ..+...+ .|+++++.+.+++.+++.+.+.+.+.+++.||++++++.+.++..+...
T Consensus 145 ~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~ 224 (565)
T 3ntd_A 145 TIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQT 224 (565)
T ss_dssp HHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCC
T ss_pred HHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccc
Confidence 554322 2221 3444444 5999999999999999999999999999999999999999999763110
Q ss_pred cccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCC
Q 010331 296 EASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDE 375 (513)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~ 375 (513)
. ................+.+.+.+. +|++++||.||+|+|.+|+++++. ..|++++++|+|.||+
T Consensus 225 ~----~~~~~~~~~~~~~~~~~~~~v~~~------~g~~i~~D~vi~a~G~~p~~~l~~-----~~g~~~~~~g~i~vd~ 289 (565)
T 3ntd_A 225 H----VASDAAGEDTAHQHIKGHLSLTLS------NGELLETDLLIMAIGVRPETQLAR-----DAGLAIGELGGIKVNA 289 (565)
T ss_dssp C----CCCGGGTCCCTTCCTTCEEEEEET------TSCEEEESEEEECSCEEECCHHHH-----HHTCCBCTTSSBCCCT
T ss_pred c----ccccccccccccccCCCcEEEEEc------CCCEEEcCEEEECcCCccchHHHH-----hCCcccCCCCCEEECC
Confidence 0 000000000000001144555542 677999999999999999987654 3468889999999999
Q ss_pred CccccCCCCEEEEcccccccCC-CCCC-CCCchHHHHHHHHHHHHHHHHH
Q 010331 376 TLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWAA 423 (513)
Q Consensus 376 ~l~~~~~p~VfaiGD~a~~~~~-~g~~-~~~~a~~A~~qg~~~a~ni~~~ 423 (513)
++|+ +.|+|||+|||+..++. .|.+ .+++++.|.+||+++|+||.+.
T Consensus 290 ~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 338 (565)
T 3ntd_A 290 MMQT-SDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGR 338 (565)
T ss_dssp TCBC-SSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred Cccc-CCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCC
Confidence 9998 89999999999987654 2333 4678999999999999999853
No 16
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=3.9e-34 Score=300.50 Aligned_cols=292 Identities=23% Similarity=0.289 Sum_probs=206.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-chhhhhhcccc-CCcc------hH-hHHHHhcC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLSGEVD-AWEI------AP-RFADLLAN 149 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-~~~~~~~g~~~-~~~~------~~-~~~~~~~~ 149 (513)
+++|||||||+||++||..|++. .++.+|+|||+++++.|.+ .++..+.+... .+++ .. ....+.++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~----~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL----DPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRIN 78 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH----CTTSEEEEECCC-----------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhh----CcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhh
Confidence 46999999999999999999985 2467999999999887755 45555555433 2233 22 23333335
Q ss_pred CCeEEEE-EeEEEEeCCCCcCcCCCceeeccceEecC---Cce--EEEecEEEEeCCCCCCCCCCCCcc-ccCCCCCCHH
Q 010331 150 TGVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLE---SGL--IVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLE 222 (513)
Q Consensus 150 ~~v~~~~-~~V~~id~~~~~~~~~~~v~~~~~~v~~~---~g~--~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~ 222 (513)
.+++++. .+|+.++++.+ .+.+. +|. ++.||+||+|||+++..|.+||.. +..+.+.+.+
T Consensus 79 ~gi~~~~~~~V~~id~~~~-------------~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~ 145 (472)
T 3iwa_A 79 KDVEALVETRAHAIDRAAH-------------TVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLD 145 (472)
T ss_dssp --CEEECSEEEEEEETTTT-------------EEEEEETTTCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHH
T ss_pred cCcEEEECCEEEEEECCCC-------------EEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHH
Confidence 7899865 69999988765 23332 244 789999999999999999999974 4556678888
Q ss_pred HHHHHHHHHHHH--HhhhH-----------HHHHhc--CcEEEEeccCeecC-CCChhHHHHHHHHHHhCCcEEEcCcee
Q 010331 223 DACRVDRKLSEL--ERRNF-----------ERLEEK--GIVQAINVETTICP-TGTPGNREAALKVLSARKVQLVLGYFV 286 (513)
Q Consensus 223 ~a~~l~~~l~~~--~~~~v-----------~~l~~~--~~vtli~~~~~ll~-~~~~~~~~~~~~~l~~~gV~v~~~~~v 286 (513)
++..+...+... ++..+ ..+... ..|+++++.+.+++ ..++.+.+.+.+.+++.||++++++.|
T Consensus 146 ~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v 225 (472)
T 3iwa_A 146 EAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKV 225 (472)
T ss_dssp HHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCE
T ss_pred HHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEE
Confidence 887776544211 11111 334443 45999999999999 889999999999999999999999999
Q ss_pred eEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccC
Q 010331 287 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN 366 (513)
Q Consensus 287 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~ 366 (513)
.++..++ +.+.+.+. +|+++++|.||+|+|.+|+++++. ..|++++
T Consensus 226 ~~i~~~~-----------------------~~v~v~~~------~g~~i~aD~Vv~a~G~~p~~~l~~-----~~gl~~~ 271 (472)
T 3iwa_A 226 VRLEGEN-----------------------GKVARVIT------DKRTLDADLVILAAGVSPNTQLAR-----DAGLELD 271 (472)
T ss_dssp EEEEESS-----------------------SBEEEEEE------SSCEEECSEEEECSCEEECCHHHH-----HHTCCBC
T ss_pred EEEEccC-----------------------CeEEEEEe------CCCEEEcCEEEECCCCCcCHHHHH-----hCCccCC
Confidence 9998743 34445443 677999999999999999987654 3468889
Q ss_pred CCCCeEeCCCccccCCCCEEEEcccccccCC-CCCC-CCCchHHHHHHHHHHHHHHHH
Q 010331 367 ARGQAETDETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 367 ~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~-~g~~-~~~~a~~A~~qg~~~a~ni~~ 422 (513)
++|+|.||+++|+ +.|+|||+|||+..++. .|++ .+++++.|.+||+++|+||.+
T Consensus 272 ~~g~i~vd~~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 328 (472)
T 3iwa_A 272 PRGAIIVDTRMRT-SDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLAD 328 (472)
T ss_dssp TTCCEECCTTCBC-SSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTT
T ss_pred CCCCEEECCCccc-CCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcC
Confidence 9999999999998 89999999999987654 2332 467899999999999999985
No 17
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=9.1e-34 Score=298.89 Aligned_cols=292 Identities=18% Similarity=0.225 Sum_probs=221.0
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-chhhhhhcc-ccCCcchHhHHHHhcCCCeEEE
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLSGE-VDAWEIAPRFADLLANTGVQFF 155 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-~~~~~~~g~-~~~~~~~~~~~~~~~~~~v~~~ 155 (513)
++++|||||||+||+++|..|++.+. ++.+|+|||+++...+.+ .++....+. ..++++.....+.+++.+++++
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~---~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 110 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYG---DANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVY 110 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHG---GGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCC---CCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEE
Confidence 35899999999999999999998651 236999999998766655 234344443 2344555555566777899987
Q ss_pred EE-eEEEEeCCCCcCcCCCceeeccceEecC-C--ceEEEecEEEEeCCCCCCCCCCCCcc------------ccCCCCC
Q 010331 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLLE-S--GLIVEYDWLVLSLGAEPKLDVVPGAA------------EFAFPFS 219 (513)
Q Consensus 156 ~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~-~--g~~i~yD~LVlAtGs~~~~~~ipG~~------------~~~~~~~ 219 (513)
.+ +|+.|+.+.+ .+.+. + +.+++||+||||||++|..|++||.. ++.+.++
T Consensus 111 ~~~~v~~i~~~~~-------------~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~ 177 (490)
T 2bc0_A 111 MESPVQSIDYDAK-------------TVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVK 177 (490)
T ss_dssp TTCCEEEEETTTT-------------EEEEEETTEEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECS
T ss_pred eCCEEEEEECCCC-------------EEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeC
Confidence 55 7999987665 24443 3 45799999999999999999999975 3456677
Q ss_pred CHHHHHHHHHHH--HHHHhhhH-----------HHHHhcC-cEEEEeccCeecC-CCChhHHHHHHHHHHhCCcEEEcCc
Q 010331 220 TLEDACRVDRKL--SELERRNF-----------ERLEEKG-IVQAINVETTICP-TGTPGNREAALKVLSARKVQLVLGY 284 (513)
Q Consensus 220 ~~~~a~~l~~~l--~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~-~~~~~~~~~~~~~l~~~gV~v~~~~ 284 (513)
+.+++..+.+.+ ...++..+ ..+...+ .|+++++.+.+++ .+++.+.+.+.+.+++.||++++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~ 257 (490)
T 2bc0_A 178 LYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGE 257 (490)
T ss_dssp SHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETC
T ss_pred CHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCC
Confidence 888877776654 21122221 3444444 5999999999988 6889999999999999999999999
Q ss_pred eeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCc
Q 010331 285 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLP 364 (513)
Q Consensus 285 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~ 364 (513)
.+.++..++ ....+.+ +++++++|.||+|+|.+||+++++. . ++
T Consensus 258 ~v~~i~~~~-----------------------~v~~v~~-------~g~~i~~D~Vi~a~G~~p~~~ll~~-----~-l~ 301 (490)
T 2bc0_A 258 TVKEVAGNG-----------------------KVEKIIT-------DKNEYDVDMVILAVGFRPNTTLGNG-----K-ID 301 (490)
T ss_dssp CEEEEECSS-----------------------SCCEEEE-------SSCEEECSEEEECCCEEECCGGGTT-----C-SC
T ss_pred EEEEEEcCC-----------------------cEEEEEE-------CCcEEECCEEEECCCCCcChHHHHh-----h-hc
Confidence 999998632 1111332 4578999999999999999887653 2 56
Q ss_pred cCCCCCeEeCCCccccCCCCEEEEcccccccCC-CCC-CCCCchHHHHHHHHHHHHHHHH
Q 010331 365 LNARGQAETDETLCVKGHPRIFALGDSSALRDS-SGR-PLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 365 ~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~-~g~-~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
++++|+|.||+++|+ +.|+|||+|||+..+++ .++ ..++++..|.+||+++|.||.+
T Consensus 302 ~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 360 (490)
T 2bc0_A 302 LFRNGAFLVNKRQET-SIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACG 360 (490)
T ss_dssp BCTTSCBCCCTTCBC-SSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCEEECCCccc-CCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 788999999999999 89999999999986542 222 2357899999999999999975
No 18
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.8e-34 Score=297.32 Aligned_cols=290 Identities=19% Similarity=0.242 Sum_probs=213.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-chhhhhhccccCCcchHhHHHHh-cCCCeEEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLSGEVDAWEIAPRFADLL-ANTGVQFFK 156 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-~~~~~~~g~~~~~~~~~~~~~~~-~~~~v~~~~ 156 (513)
+++|||||||+||+++|..|++.+ .+.+|+|||+++++.+.+ .++....+...++++.....+.+ ++.+++++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~----~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~ 78 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLK----PEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHL 78 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC----TTSEEEEECSSSCCC------------------------CTHHHHTTCEEET
T ss_pred cCcEEEECCcHHHHHHHHHHHHhC----cCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEe
Confidence 479999999999999999999862 467999999999887766 45555555444445544443334 578999998
Q ss_pred E-eEEEEeCCCCcCcCCCceeeccceEecCCc-eEEEecEEEEeCCCCCCCCCCCCcc-ccCCCCCCHHHHHHHHHHHH-
Q 010331 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESG-LIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLS- 232 (513)
Q Consensus 157 ~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g-~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~- 232 (513)
+ +|+.++.+.+ .+.++++ .++.||+||||||++++.|.+||.. ++.+..++.+++..+.+.+.
T Consensus 79 ~~~v~~i~~~~~-------------~v~~~~g~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~ 145 (449)
T 3kd9_A 79 NAEVIEVDTGYV-------------RVRENGGEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEK 145 (449)
T ss_dssp TCEEEEECSSEE-------------EEECSSSEEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSS
T ss_pred cCEEEEEecCCC-------------EEEECCceEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHh
Confidence 7 9999977654 4667776 4899999999999999999999974 34566778888877776553
Q ss_pred -HHHhhhH-----------HHHHhcC-cEEEEeccCeecCC-CChhHHHHHHHHHHhCCcEEEcCceeeEEecccccccc
Q 010331 233 -ELERRNF-----------ERLEEKG-IVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEAS 298 (513)
Q Consensus 233 -~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~-~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~ 298 (513)
..++..+ ..+...+ .|+++++.+++++. +++.+.+.+.+.+++. |++++++.+.++..++.
T Consensus 146 ~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~~---- 220 (449)
T 3kd9_A 146 YKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEER---- 220 (449)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSSS----
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccCc----
Confidence 1112221 3444444 59999999999987 8999999999999999 99999999999976431
Q ss_pred ccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCcc
Q 010331 299 VKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLC 378 (513)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~ 378 (513)
...+. .+++++++|.||+|+|.+|+++++. ..|++++++|+|.||+++|
T Consensus 221 -------------------v~~v~-------~~g~~i~~D~Vv~a~G~~p~~~l~~-----~~gl~~~~~G~i~vd~~~~ 269 (449)
T 3kd9_A 221 -------------------VEKVV-------TDAGEYKAELVILATGIKPNIELAK-----QLGVRIGETGAIWTNEKMQ 269 (449)
T ss_dssp -------------------CCEEE-------ETTEEEECSEEEECSCEEECCHHHH-----HTTCCBCTTSSBCCCTTCB
T ss_pred -------------------EEEEE-------eCCCEEECCEEEEeeCCccCHHHHH-----hCCccCCCCCCEEECCCCc
Confidence 11121 1567899999999999999987654 3468889999999999999
Q ss_pred ccCCCCEEEEcccccccCC-CCCC-CCCchHHHHHHHHHHHHHHHH
Q 010331 379 VKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 379 ~~~~p~VfaiGD~a~~~~~-~g~~-~~~~a~~A~~qg~~~a~ni~~ 422 (513)
+ +.|+|||+|||+..++. .|.+ .++++..|.+||+++|+||.+
T Consensus 270 t-~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g 314 (449)
T 3kd9_A 270 T-SVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAG 314 (449)
T ss_dssp C-SSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred c-CCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcC
Confidence 8 89999999999987654 2332 468999999999999999975
No 19
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=1.1e-33 Score=295.54 Aligned_cols=289 Identities=20% Similarity=0.263 Sum_probs=221.1
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-chhhhhhccc---cCCcchHhHHHHhcCCCeEEE
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLSGEV---DAWEIAPRFADLLANTGVQFF 155 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-~~~~~~~g~~---~~~~~~~~~~~~~~~~~v~~~ 155 (513)
+||||||||+||+++|..|++.+ ++.+|+|||++++..+.+ .++.++.+.. +++++...+.+.+++.+++++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~----~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~ 76 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADH----PDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQ 76 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC----TTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhC----cCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEE
Confidence 48999999999999999999852 367999999998766655 3444444443 345555555666777899997
Q ss_pred EE-eEEEEeCCCCcCcCCCceeeccceEecCC-----ceEEEecEEEEeCCCCCCCCCCCCcc-ccCCCCCCHHHHHHHH
Q 010331 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLLES-----GLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVD 228 (513)
Q Consensus 156 ~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~-----g~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~l~ 228 (513)
.+ +|+.++.+.+ .+.+.+ +.+++||+||+|||+++..|++||.. ++.+.+++.+++..+.
T Consensus 77 ~~~~v~~i~~~~~-------------~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~ 143 (452)
T 2cdu_A 77 MRHQVTNVDPETK-------------TIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLF 143 (452)
T ss_dssp ESEEEEEEEGGGT-------------EEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHH
T ss_pred eCCEEEEEEcCCC-------------EEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHH
Confidence 65 7999987654 244322 56899999999999999999999975 3456678888887776
Q ss_pred HHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecC-CCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccc
Q 010331 229 RKLSELERRNF-----------ERLEEKG-IVQAINVETTICP-TGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEF 295 (513)
Q Consensus 229 ~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~-~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~ 295 (513)
+.....++..+ ..+...+ .|+++++.+.+++ .+++.+.+.+.+.++++||++++++.|.++...+
T Consensus 144 ~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-- 221 (452)
T 2cdu_A 144 EEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD-- 221 (452)
T ss_dssp HHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEET--
T ss_pred HHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC--
Confidence 65432222221 3444444 5999999999998 6889999999999999999999999999997632
Q ss_pred cccccCCCcccccccccccCCCceE-EEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeC
Q 010331 296 EASVKQPESGAIPNIAADKNSDKYI-LELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETD 374 (513)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd 374 (513)
+.+. +.+ +++++++|.||+|+|.+||+++++. . ++++++|+|.||
T Consensus 222 ---------------------~~v~~v~~-------~g~~i~~D~vv~a~G~~p~~~ll~~-----~-l~~~~~G~i~Vd 267 (452)
T 2cdu_A 222 ---------------------DEIITKTL-------DGKEIKSDIAILCIGFRPNTELLKG-----K-VAMLDNGAIITD 267 (452)
T ss_dssp ---------------------TEEEEEET-------TSCEEEESEEEECCCEEECCGGGTT-----T-SCBCTTSCBCCC
T ss_pred ---------------------CeEEEEEe-------CCCEEECCEEEECcCCCCCHHHHHH-----h-hhcCCCCCEEEC
Confidence 2332 321 5678999999999999999887653 2 667889999999
Q ss_pred CCccccCCCCEEEEcccccccCC-CCCC-CCCchHHHHHHHHHHHHHHHH
Q 010331 375 ETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 375 ~~l~~~~~p~VfaiGD~a~~~~~-~g~~-~~~~a~~A~~qg~~~a~ni~~ 422 (513)
+++|+ +.|+|||+|||+..+++ .|++ .++++..|.+||+++|+||.+
T Consensus 268 ~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 316 (452)
T 2cdu_A 268 EYMHS-SNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTE 316 (452)
T ss_dssp TTSBC-SSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred CCcCc-CCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCC
Confidence 99999 89999999999987543 2221 357899999999999999975
No 20
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=7.1e-34 Score=296.84 Aligned_cols=292 Identities=17% Similarity=0.191 Sum_probs=209.4
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-chhhhhhccc-cCCcchHhHHHHhcCCCeEEEE-
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLSGEV-DAWEIAPRFADLLANTGVQFFK- 156 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-~~~~~~~g~~-~~~~~~~~~~~~~~~~~v~~~~- 156 (513)
+||||||||+||++||..|++. .++.+|+|||+++++.|.+ .++.+..+.. ..+++.....+.+++.+++++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~----~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 78 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK----YPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLN 78 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEEC
Confidence 6999999999999999999985 2467999999999887766 3444444433 3344544455666778999875
Q ss_pred EeEEEEeCCCCcCcCCCceeeccceEe-cCCceEEEecEEEEeCCCCCCCCCCCCccc-cCCCCCCHHHHHHHHHHHHHH
Q 010331 157 DRVKLLCPSDHLGVNGPMACTHGGTVL-LESGLIVEYDWLVLSLGAEPKLDVVPGAAE-FAFPFSTLEDACRVDRKLSEL 234 (513)
Q Consensus 157 ~~V~~id~~~~~~~~~~~v~~~~~~v~-~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~-~~~~~~~~~~a~~l~~~l~~~ 234 (513)
.+|+.++++.+. + .+. ..++.++.||+||||||+++..|++||... ..+.+++.+++..+.......
T Consensus 79 ~~V~~id~~~~~------v-----~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~ 147 (452)
T 3oc4_A 79 REVVAMDVENQL------I-----AWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLLENS 147 (452)
T ss_dssp CEEEEEETTTTE------E-----EEEETTEEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHHHTC
T ss_pred CEEEEEECCCCE------E-----EEEecCceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhcC
Confidence 589999887652 1 121 235668999999999999999999999753 334444444444433332221
Q ss_pred HhhhH-----------HHHHhcC-cEEEEeccCeecCC-CChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccC
Q 010331 235 ERRNF-----------ERLEEKG-IVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQ 301 (513)
Q Consensus 235 ~~~~v-----------~~l~~~~-~vtli~~~~~ll~~-~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~ 301 (513)
++..+ ..+...+ .|+++++.+.+++. +++.+.+.+.+.+++.||++++++.+.++...+
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-------- 219 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETA-------- 219 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECS--------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC--------
Confidence 22211 3344444 59999999999986 799999999999999999999999999998543
Q ss_pred CCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccC
Q 010331 302 PESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKG 381 (513)
Q Consensus 302 ~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~ 381 (513)
+.+.+.+. ++ +++||.||+|+|.+||++++.. .++++++|+|.||+++|+ +
T Consensus 220 ---------------~~v~v~~~------~g-~i~aD~Vv~A~G~~p~~~~l~~------~~~~~~~g~i~vd~~~~t-~ 270 (452)
T 3oc4_A 220 ---------------NGIVLETS------EQ-EISCDSGIFALNLHPQLAYLDK------KIQRNLDQTIAVDAYLQT-S 270 (452)
T ss_dssp ---------------SCEEEEES------SC-EEEESEEEECSCCBCCCSSCCT------TSCBCTTSCBCCCTTCBC-S
T ss_pred ---------------CeEEEEEC------CC-EEEeCEEEECcCCCCChHHHHh------hhccCCCCCEEECcCccC-C
Confidence 34445432 44 8999999999999999887753 267888999999999999 8
Q ss_pred CCCEEEEcccccccCC-CCC-CCCCchHHHHHHHHHHHHHHHHH
Q 010331 382 HPRIFALGDSSALRDS-SGR-PLPATAQVAFQQADFAGWNLWAA 423 (513)
Q Consensus 382 ~p~VfaiGD~a~~~~~-~g~-~~~~~a~~A~~qg~~~a~ni~~~ 423 (513)
.|+|||+|||+..+++ .++ ..++++..|..||+++|.||.+.
T Consensus 271 ~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~ 314 (452)
T 3oc4_A 271 VPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEK 314 (452)
T ss_dssp STTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSC
T ss_pred CCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCC
Confidence 9999999999986432 121 23578999999999999999763
No 21
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=2.8e-33 Score=301.95 Aligned_cols=292 Identities=20% Similarity=0.315 Sum_probs=229.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-chhhhhhccccCC--cchHhHHHHhcCCCeE
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLSGEVDAW--EIAPRFADLLANTGVQ 153 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-~~~~~~~g~~~~~--~~~~~~~~~~~~~~v~ 153 (513)
.++++|||||||+||++||..|++.+ ++.+|+|||+++++.|.+ .++..+.+..... .+...+..+.++.+++
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~----~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~ 109 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLS----EEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLD 109 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHC----SSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCE
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhC----cCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcE
Confidence 44689999999999999999999862 467999999999887766 4666666654322 2445566677778999
Q ss_pred EEE-EeEEEEeCCCCcCcCCCceeeccceEec---CCce--EEEecEEEEeCCCCCCCCCCCCcc--ccCCCCCCHHHHH
Q 010331 154 FFK-DRVKLLCPSDHLGVNGPMACTHGGTVLL---ESGL--IVEYDWLVLSLGAEPKLDVVPGAA--EFAFPFSTLEDAC 225 (513)
Q Consensus 154 ~~~-~~V~~id~~~~~~~~~~~v~~~~~~v~~---~~g~--~i~yD~LVlAtGs~~~~~~ipG~~--~~~~~~~~~~~a~ 225 (513)
+.. .+|+.++++.+. +.+ .++. ++.||+||+|||+++..|.+||.. +..+..++..++.
T Consensus 110 v~~~~~V~~id~~~~~-------------v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~ 176 (588)
T 3ics_A 110 IRVLSEVVKINKEEKT-------------ITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTD 176 (588)
T ss_dssp EECSEEEEEEETTTTE-------------EEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHH
T ss_pred EEECCEEEEEECCCCE-------------EEEeecCCCCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHH
Confidence 875 699999887652 333 3454 789999999999999999999972 3456678888887
Q ss_pred HHHHHHHHHH--hhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEec
Q 010331 226 RVDRKLSELE--RRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRR 291 (513)
Q Consensus 226 ~l~~~l~~~~--~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~ 291 (513)
.+...+.... +..+ ..+...+ .|+++++.+.+++.+++.+.+.+.+.+++.||++++++.|.+++.
T Consensus 177 ~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 256 (588)
T 3ics_A 177 RIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEE 256 (588)
T ss_dssp HHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEG
T ss_pred HHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEec
Confidence 7776654321 1111 3444444 599999999999999999999999999999999999999999977
Q ss_pred cccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCe
Q 010331 292 VGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQA 371 (513)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i 371 (513)
++ +.+.+. +|+++++|.||+|+|.+|++++++ ..|++++++|+|
T Consensus 257 ~~-----------------------~~v~~~--------~g~~i~~D~Vi~a~G~~p~~~~l~-----~~g~~~~~~g~i 300 (588)
T 3ics_A 257 NG-----------------------AVVRLK--------SGSVIQTDMLILAIGVQPESSLAK-----GAGLALGVRGTI 300 (588)
T ss_dssp GG-----------------------TEEEET--------TSCEEECSEEEECSCEEECCHHHH-----HTTCCBCGGGCB
T ss_pred CC-----------------------CEEEEC--------CCCEEEcCEEEEccCCCCChHHHH-----hcCceEcCCCCE
Confidence 43 333332 677899999999999999987764 346888899999
Q ss_pred EeCCCccccCCCCEEEEcccccccCC-CCCC-CCCchHHHHHHHHHHHHHHHH
Q 010331 372 ETDETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 372 ~Vd~~l~~~~~p~VfaiGD~a~~~~~-~g~~-~~~~a~~A~~qg~~~a~ni~~ 422 (513)
.||+++|+ +.|+|||+|||+..++. .|.+ .+++++.|..||+++|+||.+
T Consensus 301 ~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 301 KVNEKFQT-SDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp CCCTTSBC-SSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred EECCcccc-CCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 99999999 89999999999987654 2333 478999999999999999986
No 22
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=2.8e-33 Score=286.26 Aligned_cols=285 Identities=24% Similarity=0.326 Sum_probs=215.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc-CCchhhhhhccccCCcchH-hHHHHhcCCCeEEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF-KPMLYELLSGEVDAWEIAP-RFADLLANTGVQFFK 156 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~-~p~~~~~~~g~~~~~~~~~-~~~~~~~~~~v~~~~ 156 (513)
+++|||||||+||++||..|++.+ .+.+|+|||+++...| .+.++....+.....++.. .+..++++.+++++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g----~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 79 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLD----GETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILT 79 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTC----SSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEEC
T ss_pred CCcEEEECChHHHHHHHHHHHhhC----CCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEe
Confidence 479999999999999999999864 3468999999875443 5555554444333333332 345566678999986
Q ss_pred E-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCcc-ccCCCCCCHHHHHHHHHHHHHH
Q 010331 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSEL 234 (513)
Q Consensus 157 ~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~~ 234 (513)
+ +|+.++++.+ .|.++++ +++||+||+|||+++..|++||.. ++.+..++..++..++..+...
T Consensus 80 ~~~v~~i~~~~~-------------~v~~~~~-~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~ 145 (384)
T 2v3a_A 80 HTRVTGIDPGHQ-------------RIWIGEE-EVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGK 145 (384)
T ss_dssp SCCCCEEEGGGT-------------EEEETTE-EEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHHTTC
T ss_pred CCEEEEEECCCC-------------EEEECCc-EEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhhccC
Confidence 5 7888887554 4666654 799999999999999999999975 4567778888877766655322
Q ss_pred HhhhH-----------HHHHhcC-cEEEEeccCeecCCC-ChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccC
Q 010331 235 ERRNF-----------ERLEEKG-IVQAINVETTICPTG-TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQ 301 (513)
Q Consensus 235 ~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~ 301 (513)
++..+ ..+...+ .|+++++.+.+++.. ++.+.+.+.+.+++.||++++++.+.++..++
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-------- 217 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG-------- 217 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEET--------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC--------
Confidence 22221 3444444 599999998888874 88888999999999999999999999997643
Q ss_pred CCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccC
Q 010331 302 PESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKG 381 (513)
Q Consensus 302 ~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~ 381 (513)
+.+.+.+. +|+++++|.||+|+|.+|++++++. .+++.+ +| |.||+++|+ +
T Consensus 218 ---------------~~~~v~~~------~g~~i~~d~vv~a~G~~p~~~l~~~-----~g~~~~-~g-i~vd~~~~t-~ 268 (384)
T 2v3a_A 218 ---------------EGLEAHLS------DGEVIPCDLVVSAVGLRPRTELAFA-----AGLAVN-RG-IVVDRSLRT-S 268 (384)
T ss_dssp ---------------TEEEEEET------TSCEEEESEEEECSCEEECCHHHHH-----TTCCBS-SS-EEECTTCBC-S
T ss_pred ---------------CEEEEEEC------CCCEEECCEEEECcCCCcCHHHHHH-----CCCCCC-CC-EEECCCCCC-C
Confidence 33445543 6788999999999999999876543 367776 57 999999998 8
Q ss_pred CCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010331 382 HPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 382 ~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
.|+|||+|||+..+. ...+.+..|.+||+++|+||.+
T Consensus 269 ~~~IyA~GD~~~~~~----~~~~~~~~a~~~g~~~a~~i~g 305 (384)
T 2v3a_A 269 HANIYALGDCAEVDG----LNLLYVMPLMACARALAQTLAG 305 (384)
T ss_dssp STTEEECGGGEEETT----BCCCSHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeeeeECC----CCcchHHHHHHHHHHHHHHhcC
Confidence 999999999997532 1134577899999999999975
No 23
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=1.3e-32 Score=289.30 Aligned_cols=291 Identities=20% Similarity=0.264 Sum_probs=220.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-chhhhhhccc-cCCcchHhHHHHh-cCCCeEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLSGEV-DAWEIAPRFADLL-ANTGVQFF 155 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-~~~~~~~g~~-~~~~~~~~~~~~~-~~~~v~~~ 155 (513)
+++|||||||+||++||..|++.+ .+.+|+|||+++...+.+ .++....+.. +.+++.....+.+ +..+++++
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~----~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~ 111 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRND----ENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAK 111 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHC----TTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhC----cCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEE
Confidence 369999999999999999999852 467999999998776655 3554444432 2334433333344 45699998
Q ss_pred E-EeEEEEeCCCCcCcCCCceeeccceEec---CCce--EEEecEEEEeCCCCCCCCCCCCcc-ccCCCCCCHHHHHHHH
Q 010331 156 K-DRVKLLCPSDHLGVNGPMACTHGGTVLL---ESGL--IVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVD 228 (513)
Q Consensus 156 ~-~~V~~id~~~~~~~~~~~v~~~~~~v~~---~~g~--~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~l~ 228 (513)
. .+|+.++.+.+ .+.+ ++|+ ++.||+||+|||++++.|++||.. ++.+.+++.+++..++
T Consensus 112 ~~~~v~~i~~~~~-------------~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~ 178 (480)
T 3cgb_A 112 VRHEVTKVDTEKK-------------IVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERIL 178 (480)
T ss_dssp SSEEEEEEETTTT-------------EEEEEETTTCCEEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHH
T ss_pred eCCEEEEEECCCC-------------EEEEEEcCCCceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHH
Confidence 7 58999987665 2333 3354 799999999999999999999975 4566778888888887
Q ss_pred HHHH--HHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEecccc
Q 010331 229 RKLS--ELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGE 294 (513)
Q Consensus 229 ~~l~--~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~ 294 (513)
+.+. ..++..+ ..+...+ .|+++++.+.+++.+++.+.+.+.+.+++.||++++++.+.++..++
T Consensus 179 ~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~- 257 (480)
T 3cgb_A 179 KTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNE- 257 (480)
T ss_dssp HHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-
T ss_pred HHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCC-
Confidence 7653 1111111 3444444 59999999999998899999999999999999999999999997642
Q ss_pred ccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeC
Q 010331 295 FEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETD 374 (513)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd 374 (513)
+...+.+ ++.+++||.||+|+|.+|+++++.. .+++++++|+|.||
T Consensus 258 ----------------------~v~~v~~-------~~~~i~~D~vi~a~G~~p~~~~l~~-----~g~~~~~~G~I~Vd 303 (480)
T 3cgb_A 258 ----------------------RVEAVET-------DKGTYKADLVLVSVGVKPNTDFLEG-----TNIRTNHKGAIEVN 303 (480)
T ss_dssp ----------------------BEEEEEE-------TTEEEECSEEEECSCEEESCGGGTT-----SCCCBCTTSCBCCC
T ss_pred ----------------------cEEEEEE-------CCCEEEcCEEEECcCCCcChHHHHh-----CCcccCCCCCEEEC
Confidence 1112332 3458999999999999999887764 36788889999999
Q ss_pred CCccccCCCCEEEEcccccccCC-CCCC-CCCchHHHHHHHHHHHHHHHH
Q 010331 375 ETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 375 ~~l~~~~~p~VfaiGD~a~~~~~-~g~~-~~~~a~~A~~qg~~~a~ni~~ 422 (513)
+++|+ +.|+|||+|||+..++. .|++ .++++..|.+||+++|.||.+
T Consensus 304 ~~~~t-s~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 352 (480)
T 3cgb_A 304 AYMQT-NVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLD 352 (480)
T ss_dssp TTSBC-SSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCccC-CCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcC
Confidence 99999 89999999999987543 1332 357899999999999999975
No 24
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=2e-33 Score=296.17 Aligned_cols=292 Identities=18% Similarity=0.217 Sum_probs=210.5
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC-Cc-hhhhhhccc---------------------
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-PM-LYELLSGEV--------------------- 134 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~-p~-~~~~~~g~~--------------------- 134 (513)
..++|||||||+||++||..|++.+ .+.+|+|||+++++.|. |. ...+..+..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~----~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARD----PGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYF 85 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHS----TTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBS
T ss_pred CcCCEEEECChHHHHHHHHHHHhcC----CCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccc
Confidence 3578999999999999999998752 46799999999876553 21 111211110
Q ss_pred cCCcchHhHHHHh--cCCCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCc
Q 010331 135 DAWEIAPRFADLL--ANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGA 211 (513)
Q Consensus 135 ~~~~~~~~~~~~~--~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~ 211 (513)
.+.+......++. .+.+++++.+ +|+.|+++.+ +|.+++|.++.||+||||||++++.++++|.
T Consensus 86 ~~~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~-------------~V~~~~g~~i~yd~lviATGs~p~~~~~~~~ 152 (493)
T 1m6i_A 86 QPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDN-------------MVKLNDGSQITYEKCLIATGGTPRSLSAIDR 152 (493)
T ss_dssp SCGGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGT-------------EEEETTSCEEEEEEEEECCCEEECCCHHHHT
T ss_pred cchHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCC-------------EEEECCCCEEECCEEEECCCCCCCCCCCccc
Confidence 0000000001111 2468999997 9999987765 5888888899999999999999887665542
Q ss_pred -----cccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHh----c-CcEEEEeccCeecC-CCChhHHHHH
Q 010331 212 -----AEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEE----K-GIVQAINVETTICP-TGTPGNREAA 269 (513)
Q Consensus 212 -----~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~----~-~~vtli~~~~~ll~-~~~~~~~~~~ 269 (513)
.++.+.+++.+++..++..+...++.++ ..+.. . ..|+++++.+.+++ .+++.+.+.+
T Consensus 153 ~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~ 232 (493)
T 1m6i_A 153 AGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWT 232 (493)
T ss_dssp SCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHH
T ss_pred ccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHH
Confidence 2345667888888888776544333322 22222 1 35888887766554 3577888889
Q ss_pred HHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCC
Q 010331 270 LKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPL 349 (513)
Q Consensus 270 ~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~ 349 (513)
.+.++++||++++++.|.++..++ +.+.+.+. +|++++||.||+|+|.+||
T Consensus 233 ~~~l~~~GV~v~~~~~V~~i~~~~-----------------------~~~~v~l~------dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 233 MEKVRREGVKVMPNAIVQSVGVSS-----------------------GKLLIKLK------DGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp HHHHHTTTCEEECSCCEEEEEEET-----------------------TEEEEEET------TSCEEEESEEEECCCEEEC
T ss_pred HHHHHhcCCEEEeCCEEEEEEecC-----------------------CeEEEEEC------CCCEEECCEEEECCCCCcc
Confidence 999999999999999999997643 33445543 6789999999999999999
Q ss_pred CCCCCCCCCccCCCccCC-CCCeEeCCCccccCCCCEEEEcccccccCCC-CCCCCCchHHHHHHHHHHHHHHHH
Q 010331 350 LPHVEPPNNRLHDLPLNA-RGQAETDETLCVKGHPRIFALGDSSALRDSS-GRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 350 ~~~l~~~~~~~~~~~~~~-~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~-g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
++++.. .++++++ +|+|.||++||+ .|+|||+|||+..+++. |.+...+++.|+.||+++|.||.+
T Consensus 284 ~~l~~~-----~gl~~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g 351 (493)
T 1m6i_A 284 VELAKT-----GGLEIDSDFGGFRVNAELQA--RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTG 351 (493)
T ss_dssp CTTHHH-----HTCCBCTTTCSEECCTTCEE--ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHH-----cCCccccCCCcEEECCCccc--CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcC
Confidence 887653 3577775 689999999998 59999999999876542 333345788999999999999975
No 25
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=2.3e-32 Score=284.99 Aligned_cols=289 Identities=22% Similarity=0.312 Sum_probs=218.4
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-chhhhhhccc-cCCcchHhHHHHhcCCCeEEEE-
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLSGEV-DAWEIAPRFADLLANTGVQFFK- 156 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-~~~~~~~g~~-~~~~~~~~~~~~~~~~~v~~~~- 156 (513)
+||||||||+||++||..|++.+ ++.+|+|||+++++.+.+ .++....+.. +.+++.....+.+++.+++++.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~----~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~ 76 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLH----PDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSN 76 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC----TTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEET
T ss_pred CeEEEECCCHHHHHHHHHHHHhC----cCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEEC
Confidence 48999999999999999999852 467999999998776655 3444444443 3445555555666678999965
Q ss_pred EeEEEEeCCCCcCcCCCceeeccceEecC---Cce--EEEecEEEEeCCCCCCCCCCCCcc-ccCCCCCCHHHHHHHHHH
Q 010331 157 DRVKLLCPSDHLGVNGPMACTHGGTVLLE---SGL--IVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRK 230 (513)
Q Consensus 157 ~~V~~id~~~~~~~~~~~v~~~~~~v~~~---~g~--~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~ 230 (513)
.+|+.++.+.+ .|.+. +|+ +++||+||||||+++..|++||.. ++.+.+++.+++..+.+.
T Consensus 77 ~~v~~i~~~~~-------------~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~ 143 (447)
T 1nhp_A 77 TEITAIQPKEH-------------QVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQK 143 (447)
T ss_dssp EEEEEEETTTT-------------EEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHH
T ss_pred CEEEEEeCCCC-------------EEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHH
Confidence 58889987765 24442 353 489999999999999999999975 456677788888777665
Q ss_pred HH--HHHhhhH-----------HHHHhcC-cEEEEeccCeecC-CCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccc
Q 010331 231 LS--ELERRNF-----------ERLEEKG-IVQAINVETTICP-TGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEF 295 (513)
Q Consensus 231 l~--~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~-~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~ 295 (513)
+. ..++..+ ..+...+ .|+++++.+.+++ .+++.+.+.+.+.+++.||++++++.+.++..++
T Consensus 144 ~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-- 221 (447)
T 1nhp_A 144 TVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDG-- 221 (447)
T ss_dssp HTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECSS--
T ss_pred hhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccC--
Confidence 43 1122211 3444444 5999999988888 5788899999999999999999999999998642
Q ss_pred cccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCC
Q 010331 296 EASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDE 375 (513)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~ 375 (513)
....+.+ +++++++|.||+|+|.+|+++++.. . ++++++|+|.||+
T Consensus 222 ---------------------~v~~v~~-------~~~~i~~d~vi~a~G~~p~~~~~~~-----~-~~~~~~G~i~Vd~ 267 (447)
T 1nhp_A 222 ---------------------RVQKVVT-------DKNAYDADLVVVAVGVRPNTAWLKG-----T-LELHPNGLIKTDE 267 (447)
T ss_dssp ---------------------BCCEEEE-------SSCEEECSEEEECSCEEESCGGGTT-----T-SCBCTTSCBCCCT
T ss_pred ---------------------cEEEEEE-------CCCEEECCEEEECcCCCCChHHHHh-----h-hhhcCCCcEEECc
Confidence 1112332 4468999999999999999887653 2 5677889999999
Q ss_pred CccccCCCCEEEEcccccccCC-CCCC-CCCchHHHHHHHHHHHHHHHH
Q 010331 376 TLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 376 ~l~~~~~p~VfaiGD~a~~~~~-~g~~-~~~~a~~A~~qg~~~a~ni~~ 422 (513)
++|+ +.|+|||+|||+..++. .|++ .++++..|.+||+++|.||.+
T Consensus 268 ~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 315 (447)
T 1nhp_A 268 YMRT-SEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEE 315 (447)
T ss_dssp TCBC-SSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred cccC-CCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcC
Confidence 9999 89999999999986432 1221 357899999999999999975
No 26
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.98 E-value=2.5e-32 Score=271.61 Aligned_cols=290 Identities=19% Similarity=0.182 Sum_probs=200.5
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCC--CCcccCCchhhhhhc-cccCCcchHhHHHHhcCCCeEE
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQS--ERFVFKPMLYELLSG-EVDAWEIAPRFADLLANTGVQF 154 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~--~~~~~~p~~~~~~~g-~~~~~~~~~~~~~~~~~~~v~~ 154 (513)
++++|||||||+||+++|..|++. +++|+|||++ ..+.+.+..+.+..- .....++...+.+.+++.++++
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 87 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARY------MLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPV 87 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCE
T ss_pred CccCEEEECccHHHHHHHHHHHHC------CCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 457999999999999999999994 5599999997 111111111111110 1223456667777888889999
Q ss_pred EEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccccC---CCCCCHHHHHHHHHHH
Q 010331 155 FKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFA---FPFSTLEDACRVDRKL 231 (513)
Q Consensus 155 ~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~---~~~~~~~~a~~l~~~l 231 (513)
+..+|+.++.+++. +.+.++++.++.||+||+|||+.++.+.+||..++. .......+. ..
T Consensus 88 ~~~~v~~i~~~~~~-----------~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~-----~~ 151 (323)
T 3f8d_A 88 LLDIVEKIENRGDE-----------FVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADA-----PL 151 (323)
T ss_dssp EESCEEEEEEC--C-----------EEEEESSSCEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHG-----GG
T ss_pred EEEEEEEEEecCCE-----------EEEEECCCCEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCH-----hH
Confidence 88999999876531 257777878999999999999999999999975421 111111111 00
Q ss_pred HHHHhhhH-----------HHHHhc-CcEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccc
Q 010331 232 SELERRNF-----------ERLEEK-GIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASV 299 (513)
Q Consensus 232 ~~~~~~~v-----------~~l~~~-~~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~ 299 (513)
...++..+ ..+... ..|+++++...+++ . .+...+.+++.||++++++.+.++..++
T Consensus 152 ~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~--~---~~~~~~~~~~~gv~~~~~~~v~~i~~~~------ 220 (323)
T 3f8d_A 152 FKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA--Q---PIYVETVKKKPNVEFVLNSVVKEIKGDK------ 220 (323)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS--C---HHHHHHHHTCTTEEEECSEEEEEEEESS------
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc--C---HHHHHHHHhCCCcEEEeCCEEEEEeccC------
Confidence 00011111 233333 35999999887765 1 2233444555699999999999998753
Q ss_pred cCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccc
Q 010331 300 KQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCV 379 (513)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~ 379 (513)
....+.+.+...+ +..++++|.||+|+|++|+++++.. .+++++++|+|.||+++++
T Consensus 221 -----------------~~~~v~~~~~~~g-~~~~~~~D~vv~a~G~~p~~~~~~~-----~g~~~~~~g~i~vd~~~~t 277 (323)
T 3f8d_A 221 -----------------VVKQVVVENLKTG-EIKELNVNGVFIEIGFDPPTDFAKS-----NGIETDTNGYIKVDEWMRT 277 (323)
T ss_dssp -----------------SEEEEEEEETTTC-CEEEEECSEEEECCCEECCHHHHHH-----TTCCBCTTSSBCCCTTCBC
T ss_pred -----------------ceeEEEEEECCCC-ceEEEEcCEEEEEECCCCChhHHhh-----cCeeecCCCcEecCCCcee
Confidence 2122333211111 2348999999999999999877653 4678889999999999998
Q ss_pred cCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCCC
Q 010331 380 KGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPL 429 (513)
Q Consensus 380 ~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~~ 429 (513)
+.|+|||+|||+..+ +.++++..|+.||+.+|.||.+.+.+++.
T Consensus 278 -~~~~vya~GD~~~~~-----~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 321 (323)
T 3f8d_A 278 -SVPGVFAAGDCTSAW-----LGFRQVITAVAQGAVAATSAYRYVTEKKG 321 (323)
T ss_dssp -SSTTEEECSTTBSTT-----TTCCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred -cCCCEEEcceecCCC-----CcccceeehhhHHHHHHHHHHHHHHHhhc
Confidence 899999999999862 23789999999999999999999877653
No 27
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.98 E-value=4.2e-32 Score=266.78 Aligned_cols=274 Identities=19% Similarity=0.151 Sum_probs=199.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-chhhhhhc-cccCCcchHhHHHHhcCC-CeEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLSG-EVDAWEIAPRFADLLANT-GVQFF 155 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-~~~~~~~g-~~~~~~~~~~~~~~~~~~-~v~~~ 155 (513)
+++|+|||||+||+++|..|++. +++|+|||+++.....+ ..+.+... .....++...+.+.+.+. +++++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 75 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA------RKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWV 75 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEE
Confidence 47999999999999999999984 45999999976433222 22222221 233445667777777776 79999
Q ss_pred EEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccccCC-C--CCCHHHHHHHHHHHH
Q 010331 156 KDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-P--FSTLEDACRVDRKLS 232 (513)
Q Consensus 156 ~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~~-~--~~~~~~a~~l~~~l~ 232 (513)
.++|+.++++++. +.|.++++.++.||+||+|||+.++.|.+||..++.. . .....+...+
T Consensus 76 ~~~v~~i~~~~~~-----------~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----- 139 (297)
T 3fbs_A 76 EGRVTDAKGSFGE-----------FIVEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHGYEL----- 139 (297)
T ss_dssp ESCEEEEEEETTE-----------EEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHTGGG-----
T ss_pred EeEEEEEEEcCCe-----------EEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcchhh-----
Confidence 9999999876531 2577888888999999999999999899999765211 1 1101110000
Q ss_pred HHHhhhH-----------HHHHhcCcEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccC
Q 010331 233 ELERRNF-----------ERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQ 301 (513)
Q Consensus 233 ~~~~~~v-----------~~l~~~~~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~ 301 (513)
..++..+ ..+...+.|+++.+... .+.+.+.+.+++.||+++. +.+.++..+
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g~v~~v~~~~~-------~~~~~~~~~l~~~gv~i~~-~~v~~i~~~--------- 202 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWGETTFFTNGIV-------EPDADQHALLAARGVRVET-TRIREIAGH--------- 202 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTSEEEEECTTTC-------CCCHHHHHHHHHTTCEEEC-SCEEEEETT---------
T ss_pred cCCEEEEEecCccHHHHHHHhhhcCcEEEEECCCC-------CCCHHHHHHHHHCCcEEEc-ceeeeeecC---------
Confidence 0111111 44445557888877654 2335567889999999995 888888762
Q ss_pred CCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccC--CCC-CeEeCCCcc
Q 010331 302 PESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN--ARG-QAETDETLC 378 (513)
Q Consensus 302 ~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~--~~G-~i~Vd~~l~ 378 (513)
+. +.+. +++++++|.||+|+|++|+++++.. .+++++ ++| +|.||++++
T Consensus 203 ---------------~~--v~~~------~g~~~~~D~vi~a~G~~p~~~~~~~-----~g~~~~~~~~G~~i~vd~~~~ 254 (297)
T 3fbs_A 203 ---------------AD--VVLA------DGRSIALAGLFTQPKLRITVDWIEK-----LGCAVEEGPMGSTIVTDPMKQ 254 (297)
T ss_dssp ---------------EE--EEET------TSCEEEESEEEECCEEECCCSCHHH-----HTCCEEEETTEEEECCCTTCB
T ss_pred ---------------Ce--EEeC------CCCEEEEEEEEEccCcccCchhHHh-----cCCccccCCCCceEEeCCCCc
Confidence 12 3332 6789999999999999999887653 356655 467 899999999
Q ss_pred ccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCC
Q 010331 379 VKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 428 (513)
Q Consensus 379 ~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~ 428 (513)
+ +.|+|||+|||+.. |+++..|+.||+.+|.||.+.+.+.+
T Consensus 255 t-~~~~vya~GD~~~~--------~~~~~~A~~~g~~aa~~i~~~l~~~~ 295 (297)
T 3fbs_A 255 T-TARGIFACGDVARP--------AGSVALAVGDGAMAGAAAHRSILFPE 295 (297)
T ss_dssp C-SSTTEEECSGGGCT--------TCCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred c-CCCCEEEEeecCCc--------hHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 8 89999999999986 78999999999999999999987754
No 28
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.98 E-value=8.1e-32 Score=283.00 Aligned_cols=284 Identities=16% Similarity=0.203 Sum_probs=204.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC----------Cchh-----------hhhh-cc---
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK----------PMLY-----------ELLS-GE--- 133 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~----------p~~~-----------~~~~-g~--- 133 (513)
+++|||||||+||+++|..|++. +++|+|||+++.+... .++. .... |.
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~------g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~ 79 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL------GFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS 79 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES
T ss_pred CCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC
Confidence 47999999999999999999984 4599999998743111 0100 0000 10
Q ss_pred ---ccCCcc-----------hHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCC-c-eEEEecEEEE
Q 010331 134 ---VDAWEI-----------APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLES-G-LIVEYDWLVL 197 (513)
Q Consensus 134 ---~~~~~~-----------~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~-g-~~i~yD~LVl 197 (513)
.+...+ ...+.+++++.+++++.+++..++.+.. .|.+++ + .++.||+||+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~-------------~v~~~~gg~~~~~~d~lVi 146 (474)
T 1zmd_A 80 EVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQV-------------TATKADGGTQVIDTKNILI 146 (474)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEE-------------EEECTTSCEEEEEEEEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEE-------------EEEecCCCcEEEEeCEEEE
Confidence 000111 1123455667899999998877764322 466666 4 5799999999
Q ss_pred eCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecC-CCChh
Q 010331 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICP-TGTPG 264 (513)
Q Consensus 198 AtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~-~~~~~ 264 (513)
|||++|..|++||..+. .+.+.+++..+... -++..+ ..+...+ .|+++++.+.+++ .+++.
T Consensus 147 AtGs~p~~p~i~g~~~~--~v~t~~~~~~~~~~---~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~ 221 (474)
T 1zmd_A 147 ATGSEVTPFPGITIDED--TIVSSTGALSLKKV---PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDME 221 (474)
T ss_dssp CCCEEECCCTTCCCCSS--SEECHHHHTTCSSC---CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHH
T ss_pred CCCCCCCCCCCCCCCcC--cEEcHHHHhhcccc---CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHH
Confidence 99999998889987542 23344554332210 011111 3444444 5999999999999 88999
Q ss_pred HHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCc-eEEEecccccCCcceEEeeceEEEe
Q 010331 265 NREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDK-YILELQPAIKGLESQIFEADLVLWT 343 (513)
Q Consensus 265 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~~~~~~~~g~~i~aD~vi~a 343 (513)
+.+.+.+.++++||++++++.+.++..++ ++ +.+++.... .++++++++|.||+|
T Consensus 222 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-----------------------~~~~~v~~~~~~-~~~~~~i~~D~vv~a 277 (474)
T 1zmd_A 222 ISKNFQRILQKQGFKFKLNTKVTGATKKS-----------------------DGKIDVSIEAAS-GGKAEVITCDVLLVC 277 (474)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEECT-----------------------TSCEEEEEEETT-SCCCEEEEESEEEEC
T ss_pred HHHHHHHHHHHCCCEEEeCceEEEEEEcC-----------------------CceEEEEEEecC-CCCceEEEcCEEEEC
Confidence 99999999999999999999999998754 22 444432111 126778999999999
Q ss_pred cCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010331 344 VGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 344 ~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
+|.+||++++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. ++++..|.+||+++|.||.+
T Consensus 278 ~G~~p~~~~l~l~---~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 278 IGRRPFTKNLGLE---ELGIELDPRGRIPVNTRFQT-KIPNIYAIGDVVAG--------PMLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp SCEEECCTTSSHH---HHTCCCCTTSCCCCCTTCBC-SSTTEEECGGGSSS--------CCCHHHHHHHHHHHHHHHTT
T ss_pred cCCCcCCCcCCch---hcCCccCCCCCEEECcCCcc-CCCCEEEeeecCCC--------CccHHHHHHHHHHHHHHhcC
Confidence 9999998774311 34678888999999999998 89999999999986 67899999999999999975
No 29
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.98 E-value=1.2e-31 Score=280.30 Aligned_cols=280 Identities=18% Similarity=0.184 Sum_probs=202.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC----Cchhh-----------hh----h-cc-----
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK----PMLYE-----------LL----S-GE----- 133 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~----p~~~~-----------~~----~-g~----- 133 (513)
+++|||||||+||+++|.+|++. +++|+|||++. +... ...+. .+ . |.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lie~~~-~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~ 75 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL------GQKVTIVEKGN-LGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENV 75 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT------TCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC------CCeEEEEECCC-CCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 47899999999999999999984 55999999973 2100 00000 00 0 00
Q ss_pred -ccCCc-----------chHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCc-eEEEecEEEEeCC
Q 010331 134 -VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG-LIVEYDWLVLSLG 200 (513)
Q Consensus 134 -~~~~~-----------~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g-~~i~yD~LVlAtG 200 (513)
.+... +...+.+.+++.+++++.+++..++.+.. .|.+++| .+++||+||+|||
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v-------------~V~~~~G~~~i~~d~lViATG 142 (455)
T 1ebd_A 76 TIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTV-------------RVVNGDSAQTYTFKNAIIATG 142 (455)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEE-------------EEEETTEEEEEECSEEEECCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeE-------------EEEeCCCcEEEEeCEEEEecC
Confidence 00001 11223456667899999987776764321 4666667 6899999999999
Q ss_pred CCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHH
Q 010331 201 AEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREA 268 (513)
Q Consensus 201 s~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~ 268 (513)
+++..|++||..+. +.+.+++..+... -++..+ ..+...+ .|+++++.+.+++.+++.+.+.
T Consensus 143 s~p~~~~~~g~~~~---v~~~~~~~~~~~~---~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~ 216 (455)
T 1ebd_A 143 SRPIELPNFKFSNR---ILDSTGALNLGEV---PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAI 216 (455)
T ss_dssp EEECCBTTBCCCSS---EECHHHHHTCSSC---CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHH
T ss_pred CCCCCCCCCCccce---EecHHHHhccccC---CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHH
Confidence 99988888886543 3455554432210 011111 3444444 5999999999999999999999
Q ss_pred HHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCC
Q 010331 269 ALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKP 348 (513)
Q Consensus 269 ~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p 348 (513)
+.+.+++.||++++++.+.+++.++ +.+.+++. ..++++++++|.||+|+|.+|
T Consensus 217 l~~~l~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~---~~g~~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 217 IKKRLKKKGVEVVTNALAKGAEERE-----------------------DGVTVTYE---ANGETKTIDADYVLVTVGRRP 270 (455)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEET-----------------------TEEEEEEE---ETTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeC-----------------------CeEEEEEE---eCCceeEEEcCEEEECcCCCc
Confidence 9999999999999999999998643 33444442 112567899999999999999
Q ss_pred CCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010331 349 LLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 349 ~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
+++++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. ++++..|.+||+++|.||.+
T Consensus 271 ~~~~l~~~---~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~g~~aa~~i~~ 332 (455)
T 1ebd_A 271 NTDELGLE---QIGIKMTNRGLIEVDQQCRT-SVPNIFAIGDIVPG--------PALAHKASYEGKVAAEAIAG 332 (455)
T ss_dssp SCSSSSTT---TTTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSS--------CCCHHHHHHHHHHHHHHHTS
T ss_pred ccCcCChh---hcCCccCCCCCEeeCCCccc-CCCCEEEEeccCCC--------cccHHHHHHHHHHHHHHHcC
Confidence 98874311 34688888999999999998 89999999999986 67899999999999999975
No 30
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.98 E-value=4.5e-31 Score=276.78 Aligned_cols=277 Identities=20% Similarity=0.290 Sum_probs=201.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc------------------------ccCCchhhhhhc--
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF------------------------VFKPMLYELLSG-- 132 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~------------------------~~~p~~~~~~~g-- 132 (513)
+++|||||||+||+++|.+|++. +++|+|||+++.- ...|....+...
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 77 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQ------GAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVP 77 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCC
Confidence 57999999999999999999984 4599999998410 000100000000
Q ss_pred cccCCcch-------H-----hHHHHhcCC-CeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCc--eEEEecEEEE
Q 010331 133 EVDAWEIA-------P-----RFADLLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVL 197 (513)
Q Consensus 133 ~~~~~~~~-------~-----~~~~~~~~~-~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g--~~i~yD~LVl 197 (513)
..+...+. . .+.+++++. +++++.+++..++.... .|.+++| .+++||+|||
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~-------------~v~~~~g~~~~~~~d~lvi 144 (467)
T 1zk7_A 78 TIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSL-------------TVRLNEGGERVVMFDRCLV 144 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEE-------------EEEETTSSEEEEECSEEEE
T ss_pred ccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEE-------------EEEeCCCceEEEEeCEEEE
Confidence 00001111 1 123556666 99999999988875432 4666677 6899999999
Q ss_pred eCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhH
Q 010331 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGN 265 (513)
Q Consensus 198 AtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~ 265 (513)
|||++|+.|++||..+. .+.+.+++..+... .++..+ ..+...+ .|+++++.+.+++ +++.+
T Consensus 145 AtGs~p~~p~i~G~~~~--~~~~~~~~~~~~~~---~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~ 218 (467)
T 1zk7_A 145 ATGASPAVPPIPGLKES--PYWTSTEALASDTI---PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-EDPAI 218 (467)
T ss_dssp CCCEEECCCCCTTTTTS--CCBCHHHHHHCSSC---CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-SCHHH
T ss_pred eCCCCCCCCCCCCCCcC--ceecHHHHhccccc---CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-CCHHH
Confidence 99999999999997543 23455554433210 011111 3344434 5999999999999 88999
Q ss_pred HHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecC
Q 010331 266 REAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVG 345 (513)
Q Consensus 266 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G 345 (513)
.+.+.+.+++.||++++++.|.++..++ +.+.+.+ ++.++++|.||+|+|
T Consensus 219 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-----------------------~~~~v~~-------~~~~i~aD~Vv~a~G 268 (467)
T 1zk7_A 219 GEAVTAAFRAEGIEVLEHTQASQVAHMD-----------------------GEFVLTT-------THGELRADKLLVATG 268 (467)
T ss_dssp HHHHHHHHHHTTCEEETTCCEEEEEEET-----------------------TEEEEEE-------TTEEEEESEEEECSC
T ss_pred HHHHHHHHHhCCCEEEcCCEEEEEEEeC-----------------------CEEEEEE-------CCcEEEcCEEEECCC
Confidence 9999999999999999999999997643 2333443 345799999999999
Q ss_pred CCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010331 346 SKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 346 ~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
.+|+++++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. |..+..|.+||+++|.||..
T Consensus 269 ~~p~~~~l~l~---~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~--------~~~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 269 RTPNTRSLALD---AAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTDQ--------PQFVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp EEESCTTSCGG---GGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBSS--------CCCHHHHHHHHHHHHHHHTT
T ss_pred CCcCCCcCCch---hcCCcCCCCCCEEECCCccc-CCCCEEEEeccCCC--------cccHHHHHHHHHHHHHHHcC
Confidence 99998764211 34778888999999999998 89999999999986 67899999999999999975
No 31
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.97 E-value=1.5e-31 Score=282.68 Aligned_cols=287 Identities=20% Similarity=0.206 Sum_probs=202.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC-------C---chhh---------hhh-cc-----
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLYE---------LLS-GE----- 133 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~-------p---~~~~---------~~~-g~----- 133 (513)
++||||||||+||++||.+|++.. ..+++|+|||+++ .... | ++.. ... |.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~---~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~ 77 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSH---PETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFD 77 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHC---TTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC----
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC---CCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccC
Confidence 479999999999999999999851 0156999999986 2110 0 0000 000 00
Q ss_pred ---ccCCc-----------chHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCce--EEEecEEEE
Q 010331 134 ---VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGL--IVEYDWLVL 197 (513)
Q Consensus 134 ---~~~~~-----------~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~--~i~yD~LVl 197 (513)
.+... +...+.+++++.+++++.++++.+++.... .... ..|.+++|+ ++.||+||+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~--~~~~-----~~V~~~~g~~~~~~~d~lvi 150 (499)
T 1xdi_A 78 DAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGL--ARHR-----IKATAADGSTSEHEADVVLV 150 (499)
T ss_dssp --CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCC--SSEE-----EEEECTTSCEEEEEESEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccC--CCCE-----EEEEeCCCcEEEEEeCEEEE
Confidence 01111 112245666678999999988888762100 0000 146666665 799999999
Q ss_pred eCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhH
Q 010331 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGN 265 (513)
Q Consensus 198 AtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~ 265 (513)
|||+++..|++||.... .+.+.+++..+... .++..+ ..+...+ .|+++++.+.+++.+++.+
T Consensus 151 ATGs~p~~p~i~g~~~~--~v~~~~~~~~~~~~---~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~ 225 (499)
T 1xdi_A 151 ATGASPRILPSAQPDGE--RILTWRQLYDLDAL---PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADA 225 (499)
T ss_dssp CCCEEECCCGGGCCCSS--SEEEGGGGGGCSSC---CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHH
T ss_pred cCCCCCCCCCCCCCCcC--cEEehhHhhhhhcc---CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHH
Confidence 99999988888886432 12222232221110 011111 2333333 5999999999999999999
Q ss_pred HHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecC
Q 010331 266 REAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVG 345 (513)
Q Consensus 266 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G 345 (513)
.+.+.+.+++.||++++++.|.++..++ +++.+++. +++++++|.||+|+|
T Consensus 226 ~~~l~~~l~~~GV~i~~~~~V~~i~~~~-----------------------~~v~v~~~------~g~~i~aD~Vv~a~G 276 (499)
T 1xdi_A 226 ALVLEESFAERGVRLFKNARAASVTRTG-----------------------AGVLVTMT------DGRTVEGSHALMTIG 276 (499)
T ss_dssp HHHHHHHHHHTTCEEETTCCEEEEEECS-----------------------SSEEEEET------TSCEEEESEEEECCC
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEEEeC-----------------------CEEEEEEC------CCcEEEcCEEEECCC
Confidence 9999999999999999999999998744 34555532 677899999999999
Q ss_pred CCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010331 346 SKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 346 ~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
.+||++++... ..|++++++|+|.||+++|+ +.|+|||+|||+.. ++++..|.+||+++|.||.+
T Consensus 277 ~~p~~~~l~l~---~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~--------~~l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 277 SVPNTSGLGLE---RVGIQLGRGNYLTVDRVSRT-LATGIYAAGDCTGL--------LPLASVAAMQGRIAMYHALG 341 (499)
T ss_dssp EEECCSSSCTT---TTTCCCBTTTBCCCCSSSBC-SSTTEEECSGGGTS--------CSCHHHHHHHHHHHHHHHTT
T ss_pred CCcCCCcCCch---hcCceECCCCCEEECCCccc-CCCCEEEEeccCCC--------cccHHHHHHHHHHHHHHhcC
Confidence 99998874311 34788888999999999998 89999999999986 67899999999999999975
No 32
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.97 E-value=9.6e-32 Score=269.21 Aligned_cols=288 Identities=15% Similarity=0.155 Sum_probs=198.4
Q ss_pred CCCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC--chh------hh--hhccccCCcchHhHHH
Q 010331 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP--MLY------EL--LSGEVDAWEIAPRFAD 145 (513)
Q Consensus 76 ~~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p--~~~------~~--~~g~~~~~~~~~~~~~ 145 (513)
..++++|||||||+||+++|..|++. +++|+|||+.+.....+ .+. .+ ........++...+.+
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARA------EIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMRE 92 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHT------TCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHH
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHH
Confidence 34568999999999999999999994 55999999965221111 010 00 0011123356667777
Q ss_pred HhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEec---CCceEEEecEEEEeCCCCCCCCCCCCccccCC-CCCCH
Q 010331 146 LLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLL---ESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTL 221 (513)
Q Consensus 146 ~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~---~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~~-~~~~~ 221 (513)
.+++.+++++.++|+.++.+.+. ..+.+ +++.++.||+||+|||+.++.+.+||..++.. .+...
T Consensus 93 ~~~~~gv~i~~~~v~~i~~~~~~-----------~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~ 161 (338)
T 3itj_A 93 QSTKFGTEIITETVSKVDLSSKP-----------FKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISAC 161 (338)
T ss_dssp HHHHTTCEEECSCEEEEECSSSS-----------EEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESC
T ss_pred HHHHcCCEEEEeEEEEEEEcCCE-----------EEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEc
Confidence 88888999999889999877652 13433 36678999999999999999999999653211 11111
Q ss_pred HHHHHHHHHH--HHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHh-CCcEEEcCcee
Q 010331 222 EDACRVDRKL--SELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSA-RKVQLVLGYFV 286 (513)
Q Consensus 222 ~~a~~l~~~l--~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~-~gV~v~~~~~v 286 (513)
.. ....+ ...++..+ ..|...+ .|+++++...+++ .+.+.+.+.+ .||++++++.+
T Consensus 162 ~~---~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------~~~~~~~l~~~~gv~i~~~~~v 232 (338)
T 3itj_A 162 AV---CDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------STIMQKRAEKNEKIEILYNTVA 232 (338)
T ss_dssp HH---HHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------CHHHHHHHHHCTTEEEECSEEE
T ss_pred hh---cccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------CHHHHHHHHhcCCeEEeeccee
Confidence 11 11110 00011111 3444443 4999998877654 2344555555 49999999999
Q ss_pred eEEeccccccccccCCCcccccccccccCCCce-EEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCcc
Q 010331 287 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPL 365 (513)
Q Consensus 287 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~ 365 (513)
.++..++ +.+ .+.+.+..++ ++++++||.||+|+|++|+++++.. ++++
T Consensus 233 ~~i~~~~-----------------------~~~~~v~~~~~~~g-~~~~i~~D~vi~a~G~~p~~~~~~~------~l~~ 282 (338)
T 3itj_A 233 LEAKGDG-----------------------KLLNALRIKNTKKN-EETDLPVSGLFYAIGHTPATKIVAG------QVDT 282 (338)
T ss_dssp EEEEESS-----------------------SSEEEEEEEETTTT-EEEEEECSEEEECSCEEECCGGGBT------TBCB
T ss_pred EEEEccc-----------------------CcEEEEEEEECCCC-ceEEEEeCEEEEEeCCCCChhHhhC------ceEe
Confidence 9998754 212 1333321112 4678999999999999999877753 5788
Q ss_pred CCCCCeEe-CCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCC
Q 010331 366 NARGQAET-DETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 427 (513)
Q Consensus 366 ~~~G~i~V-d~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~ 427 (513)
+++|+|.| |+++++ +.|+|||+|||+..+ ++++..|+.||+.+|.||.+.+.++
T Consensus 283 ~~~G~i~v~~~~~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~ 337 (338)
T 3itj_A 283 DEAGYIKTVPGSSLT-SVPGFFAAGDVQDSK-------YRQAITSAGSGCMAALDAEKYLTSL 337 (338)
T ss_dssp CTTSCBCCCTTSSBC-SSTTEEECGGGGCSS-------CCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCcEEEcCccccc-CCCCEEEeeccCCCC-------ccceeeehhhhHHHHHHHHHHHhcC
Confidence 89999996 778887 899999999999842 6899999999999999999999875
No 33
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=1.6e-31 Score=280.62 Aligned_cols=285 Identities=19% Similarity=0.223 Sum_probs=202.7
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCc----hhh------------h----h-hcc---
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM----LYE------------L----L-SGE--- 133 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~----~~~------------~----~-~g~--- 133 (513)
.++||||||||+||+++|..|++.+ ++|+|||+++.+..... .+. + . .|.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g------~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~ 78 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLG------FKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVS 78 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHT------CCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEES
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCC------CeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 3589999999999999999999854 59999999864321100 000 0 0 000
Q ss_pred ---ccCCc-----------chHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCc--eEEEecEEEE
Q 010331 134 ---VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVL 197 (513)
Q Consensus 134 ---~~~~~-----------~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g--~~i~yD~LVl 197 (513)
.+... +...+.+.+++.+++++.+++..++.+.. .|.+++| .+++||+||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~-------------~v~~~~G~~~~i~~d~lIi 145 (470)
T 1dxl_A 79 NVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEI-------------SVDTIEGENTVVKGKHIII 145 (470)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEE-------------EECCSSSCCEEEECSEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEE-------------EEEeCCCceEEEEcCEEEE
Confidence 00011 11112345556789999987766654321 4555666 6899999999
Q ss_pred eCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhH
Q 010331 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGN 265 (513)
Q Consensus 198 AtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~ 265 (513)
|||+.+..|+++|.... .+.+.+++..+... .++..+ ..+...+ .|+++++.+.+++..++.+
T Consensus 146 AtGs~p~~p~~~g~~~~--~v~~~~~~~~~~~~---~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~ 220 (470)
T 1dxl_A 146 ATGSDVKSLPGVTIDEK--KIVSSTGALALSEI---PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEI 220 (470)
T ss_dssp CCCEEECCBTTBCCCSS--SEECHHHHTTCSSC---CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHH
T ss_pred CCCCCCCCCCCCCCCcc--cEEeHHHhhhhhhc---CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccccHHH
Confidence 99999988888886431 23344444332110 011111 3343333 5999999999999999999
Q ss_pred HHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecC
Q 010331 266 REAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVG 345 (513)
Q Consensus 266 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G 345 (513)
.+.+.+.+++.||++++++.+.++..++ +.+.+++....+ ++++++++|.||+|+|
T Consensus 221 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~~~~~-g~~~~~~~D~vv~a~G 276 (470)
T 1dxl_A 221 RKQFQRSLEKQGMKFKLKTKVVGVDTSG-----------------------DGVKLTVEPSAG-GEQTIIEADVVLVSAG 276 (470)
T ss_dssp HHHHHHHHHHSSCCEECSEEEEEEECSS-----------------------SSEEEEEEESSS-CCCEEEEESEEECCCC
T ss_pred HHHHHHHHHHcCCEEEeCCEEEEEEEcC-----------------------CeEEEEEEecCC-CcceEEECCEEEECCC
Confidence 9999999999999999999999998754 334444431111 1347899999999999
Q ss_pred CCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010331 346 SKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 346 ~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
.+||++++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. ++++..|.+||+++|.||.+
T Consensus 277 ~~p~~~~l~~~---~~gl~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 277 RTPFTSGLNLD---KIGVETDKLGRILVNERFST-NVSGVYAIGDVIPG--------PMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp EEECCTTSCCT---TTTCCBCSSSCBCCCTTCBC-SSTTEEECSTTSSS--------CCCHHHHHHHHHHHHHHHTT
T ss_pred CCcCCCCCCch---hcCCccCCCCCEeECcCCcc-CCCCEEEEeccCCC--------CccHHHHHHHHHHHHHHHcC
Confidence 99998874311 34688888899999999998 89999999999986 67899999999999999975
No 34
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=3.6e-31 Score=279.66 Aligned_cols=282 Identities=16% Similarity=0.207 Sum_probs=191.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc---cCCchhh-----------hh----h-cc-----c
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV---FKPMLYE-----------LL----S-GE-----V 134 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~---~~p~~~~-----------~~----~-g~-----~ 134 (513)
++||||||||+||++||.+|++. +.+|+|||+++... +....+. .+ . |. .
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~------g~~V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~ 75 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH------NAKVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSF 75 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCC
T ss_pred ccCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCcc
Confidence 47999999999999999999984 55999999986210 0000000 00 0 10 0
Q ss_pred cC-----------CcchHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecC-------------CceEE
Q 010331 135 DA-----------WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLE-------------SGLIV 190 (513)
Q Consensus 135 ~~-----------~~~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~-------------~g~~i 190 (513)
+. +.+...+.+.+++.+++++.+++..++.. .+.+. ++.++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~---------------~v~v~~~~~~~~~~~~~~~~~~~ 140 (500)
T 1onf_A 76 NLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSEN---------------RILIKGTKDNNNKDNGPLNEEIL 140 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC-----------------------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCC---------------EEEEEeccccccccccCCCceEE
Confidence 00 11112234455677999998877655431 12222 25679
Q ss_pred EecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeec
Q 010331 191 EYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTIC 258 (513)
Q Consensus 191 ~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll 258 (513)
+||+||||||++|..|++||.. + +.+.+++..+.. .++..+ ..+...+ .|+++++.+.++
T Consensus 141 ~~d~lViAtGs~p~~p~i~G~~-~---~~~~~~~~~~~~----~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 212 (500)
T 1onf_A 141 EGRNILIAVGNKPVFPPVKGIE-N---TISSDEFFNIKE----SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL 212 (500)
T ss_dssp CBSSEEECCCCCBCCCSCTTGG-G---CEEHHHHTTCCC----CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC
T ss_pred EeCEEEECCCCCCCCCCCCCCC-c---ccCHHHHhccCC----CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC
Confidence 9999999999999999999973 3 223344332211 111111 3444444 599999999999
Q ss_pred CCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceE-Eee
Q 010331 259 PTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQI-FEA 337 (513)
Q Consensus 259 ~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~-i~a 337 (513)
+.+++.+.+.+.+.|+++||++++++.+.+++.+++ +.+.+.+. +|++ +++
T Consensus 213 ~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~----------------------~~~~v~~~------~g~~~~~~ 264 (500)
T 1onf_A 213 RKFDESVINVLENDMKKNNINIVTFADVVEIKKVSD----------------------KNLSIHLS------DGRIYEHF 264 (500)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESST----------------------TCEEEEET------TSCEEEEE
T ss_pred cccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCC----------------------ceEEEEEC------CCcEEEEC
Confidence 999999999999999999999999999999986431 22445543 5666 999
Q ss_pred ceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCC--------------------
Q 010331 338 DLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDS-------------------- 397 (513)
Q Consensus 338 D~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~-------------------- 397 (513)
|.||+|+|.+||++.+... ..++++ ++|+|.||+++|+ +.|+|||+|||+..+++
T Consensus 265 D~vi~a~G~~p~~~~l~~~---~~g~~~-~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~ 339 (500)
T 1onf_A 265 DHVIYCVGRSPDTENLKLE---KLNVET-NNNYIVVDENQRT-SVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNK 339 (500)
T ss_dssp SEEEECCCBCCTTTTSSCT---TTTCCB-SSSCEEECTTCBC-SSSSEEECSTTEEEC----------------------
T ss_pred CEEEECCCCCcCCCCCCch---hcCccc-cCCEEEECCCccc-CCCCEEEEecccccccccccccccccccccccccccc
Confidence 9999999999998654211 346777 7899999999997 89999999999953210
Q ss_pred ----CC--CCCCCchHHHHHHHHHHHHHHHH
Q 010331 398 ----SG--RPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 398 ----~g--~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
.+ ...+++++.|.+||+++|+||.+
T Consensus 340 ~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 340 KENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp --------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred ccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 00 02377899999999999999975
No 35
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.97 E-value=1.2e-31 Score=281.23 Aligned_cols=283 Identities=18% Similarity=0.202 Sum_probs=203.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC-------C---chh------h----hh-hcc----
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY------E----LL-SGE---- 133 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~-------p---~~~------~----~~-~g~---- 133 (513)
+++|||||||+||++||.+|++. +++|+|||+++.+... | +++ . .. .|.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~ 75 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL------GMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGE 75 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 47999999999999999999994 5599999998644211 1 000 0 00 000
Q ss_pred ---ccCCc-----------chHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCc--eEEEecEEEE
Q 010331 134 ---VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVL 197 (513)
Q Consensus 134 ---~~~~~-----------~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g--~~i~yD~LVl 197 (513)
.+... +...+.+++++.+++++.+++..++.... .|.+++| .+++||+||+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~-------------~v~~~~G~~~~~~~d~lvi 142 (468)
T 2qae_A 76 GVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSI-------------RVNGLDGKQEMLETKKTII 142 (468)
T ss_dssp GCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEE-------------EEEETTSCEEEEEEEEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEE-------------EEEecCCceEEEEcCEEEE
Confidence 01111 11123455666789999998777765332 4666666 6899999999
Q ss_pred eCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhH
Q 010331 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGN 265 (513)
Q Consensus 198 AtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~ 265 (513)
|||+++..|++||.... .+.+.+++..+... .++..+ ..+...+ .|+++++.+.+++.+++.+
T Consensus 143 AtG~~p~~p~~~g~~~~--~v~t~~~~~~~~~~---~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~ 217 (468)
T 2qae_A 143 ATGSEPTELPFLPFDEK--VVLSSTGALALPRV---PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDV 217 (468)
T ss_dssp CCCEEECCBTTBCCCSS--SEECHHHHHTCSSC---CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHH
T ss_pred CCCCCcCCCCCCCCCcC--ceechHHHhhcccC---CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccccCCHHH
Confidence 99999988888886431 24455555443210 011111 3344444 5999999999999999999
Q ss_pred HHHHHHHH-HhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEec
Q 010331 266 REAALKVL-SARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTV 344 (513)
Q Consensus 266 ~~~~~~~l-~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~ 344 (513)
.+.+.+.+ +++||++++++.+.+++.++ +.+.+.+.. ..++++++++|.||+|+
T Consensus 218 ~~~l~~~l~~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~~--~~g~~~~i~~D~vv~a~ 272 (468)
T 2qae_A 218 TNALVGALAKNEKMKFMTSTKVVGGTNNG-----------------------DSVSLEVEG--KNGKRETVTCEALLVSV 272 (468)
T ss_dssp HHHHHHHHHHHTCCEEECSCEEEEEEECS-----------------------SSEEEEEEC--C---EEEEEESEEEECS
T ss_pred HHHHHHHHhhcCCcEEEeCCEEEEEEEcC-----------------------CeEEEEEEc--CCCceEEEECCEEEECC
Confidence 99999999 99999999999999998744 334444421 01123689999999999
Q ss_pred CCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEccccc-ccCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010331 345 GSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 345 G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~-~~~~~g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
|.+||++++... ..+++++++|+|.||+++|+ +.|+|||+|||+. . ++++..|.+||+++|.||.+
T Consensus 273 G~~p~~~~l~l~---~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~--------~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 273 GRRPFTGGLGLD---KINVAKNERGFVKIGDHFET-SIPDVYAIGDVVDKG--------PMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp CEEECCTTSCHH---HHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGBSSS--------CSCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCCCch---hcCCccCCCCCEeECCCccc-CCCCEEEeeccCCCC--------CccHhHHHHHHHHHHHHHcC
Confidence 999998875311 34678888899999999998 8999999999998 5 78999999999999999975
No 36
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.1e-31 Score=278.70 Aligned_cols=278 Identities=18% Similarity=0.224 Sum_probs=199.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc------CC---chh-----hhhh-----c-------
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF------KP---MLY-----ELLS-----G------- 132 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~------~p---~~~-----~~~~-----g------- 132 (513)
++||||||||+||+++|..|++. +.+|+|||+++.-.. .| +++ .... +
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~------g~~V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~ 84 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASY------GAKTLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPL 84 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------SCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCC
T ss_pred cCCEEEEcCCHHHHHHHHHHHHC------CCcEEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccc
Confidence 47999999999999999999984 559999999752100 00 000 0000 0
Q ss_pred -----cccCCc-----------chHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCce--EEEecE
Q 010331 133 -----EVDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGL--IVEYDW 194 (513)
Q Consensus 133 -----~~~~~~-----------~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~--~i~yD~ 194 (513)
..+... +...+...+++.+++++.+++..+++... .|.+++|+ ++.||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~-------------~v~~~~g~~~~~~~d~ 151 (479)
T 2hqm_A 85 DKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNV-------------EVQKRDNTTEVYSANH 151 (479)
T ss_dssp SGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCE-------------EEEESSSCCEEEEEEE
T ss_pred ccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEE-------------EEEeCCCcEEEEEeCE
Confidence 000000 11123344556799999998887754332 45556665 799999
Q ss_pred EEEeCCCCCCCC-CCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCC
Q 010331 195 LVLSLGAEPKLD-VVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTG 261 (513)
Q Consensus 195 LVlAtGs~~~~~-~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~ 261 (513)
||||||++|..| ++||.. ++ .+.+++..+... .++..+ ..+...+ .|+++++.+.+++.+
T Consensus 152 lviAtGs~p~~p~~i~g~~-~~---~~~~~~~~l~~~---~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~ 224 (479)
T 2hqm_A 152 ILVATGGKAIFPENIPGFE-LG---TDSDGFFRLEEQ---PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKF 224 (479)
T ss_dssp EEECCCEEECCCTTSTTGG-GS---BCHHHHHHCSSC---CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS
T ss_pred EEEcCCCCCCCCCCCCCcc-cc---cchHHHhccccc---CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccccc
Confidence 999999999988 899973 32 234444332210 011111 3344444 599999999999999
Q ss_pred ChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcc-eEEeeceE
Q 010331 262 TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLES-QIFEADLV 340 (513)
Q Consensus 262 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g-~~i~aD~v 340 (513)
++.+.+.+.+.|++.||++++++.+.++..+++. ..+.+.+. +| +++++|.|
T Consensus 225 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~---------------------~~~~v~~~------~G~~~i~~D~v 277 (479)
T 2hqm_A 225 DECIQNTITDHYVKEGINVHKLSKIVKVEKNVET---------------------DKLKIHMN------DSKSIDDVDEL 277 (479)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-C---------------------CCEEEEET------TSCEEEEESEE
T ss_pred CHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCC---------------------cEEEEEEC------CCcEEEEcCEE
Confidence 9999999999999999999999999999764310 12445543 56 78999999
Q ss_pred EEecCCCCCCCC-CCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHH
Q 010331 341 LWTVGSKPLLPH-VEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWN 419 (513)
Q Consensus 341 i~a~G~~p~~~~-l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~n 419 (513)
|+|+|.+||+.+ ++ ..|++++++|+|.||+++|+ +.|+|||+|||+.. +.++..|.+||+++|.|
T Consensus 278 v~a~G~~p~~~l~l~-----~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~~~g~~aa~~ 343 (479)
T 2hqm_A 278 IWTIGRKSHLGMGSE-----NVGIKLNSHDQIIADEYQNT-NVPNIYSLGDVVGK--------VELTPVAIAAGRKLSNR 343 (479)
T ss_dssp EECSCEEECCCSSGG-----GGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTTS--------SCCHHHHHHHHHHHHHH
T ss_pred EECCCCCCccccChh-----hcCceECCCCCEeECCCCcc-CCCCEEEEEecCCC--------cccHHHHHHHHHHHHHH
Confidence 999999999844 23 34788899999999999998 89999999999765 67899999999999999
Q ss_pred HHHH
Q 010331 420 LWAA 423 (513)
Q Consensus 420 i~~~ 423 (513)
|.+.
T Consensus 344 i~~~ 347 (479)
T 2hqm_A 344 LFGP 347 (479)
T ss_dssp HHSC
T ss_pred hcCC
Confidence 9853
No 37
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.97 E-value=1.2e-31 Score=281.13 Aligned_cols=281 Identities=20% Similarity=0.261 Sum_probs=201.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCc----hhhh--------------hh-c--cccCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM----LYEL--------------LS-G--EVDAW 137 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~----~~~~--------------~~-g--~~~~~ 137 (513)
.+||+|||||+||+++|..|++. +.+|+|||+++.+...-. .+.. .. . ..+..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~------G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~ 77 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKA------KYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFS 77 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHH
T ss_pred cceEEEECCCHHHHHHHHHHHhC------CCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHH
Confidence 47999999999999999999984 559999998774422100 0000 00 0 00000
Q ss_pred c----------ch--HhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCceE--EEecEEEEeCCCCC
Q 010331 138 E----------IA--PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLI--VEYDWLVLSLGAEP 203 (513)
Q Consensus 138 ~----------~~--~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~--i~yD~LVlAtGs~~ 203 (513)
. +. ..+..++++.+++++.+++..++++.. .|.+++|++ +.||+||||||++|
T Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~-------------~V~~~~g~~~~~~~d~lviAtG~~p 144 (466)
T 3l8k_A 78 TVQDRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHV-------------IVKTDEGKEIEAETRYMIIASGAET 144 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEE-------------EEEETTSCEEEEEEEEEEECCCEEE
T ss_pred HHHHHHHhheeccccchHHHHHHhCCCEEEEeEEEEecCCeE-------------EEEcCCCcEEEEecCEEEECCCCCc
Confidence 0 11 344556677899999999999986543 577777777 99999999999999
Q ss_pred CCCCCCCccccCCCCCCHHHHHHHHHHHHHH-HhhhH-----------HHHHhcC-cEEEEeccCeecCCC-ChhHHHHH
Q 010331 204 KLDVVPGAAEFAFPFSTLEDACRVDRKLSEL-ERRNF-----------ERLEEKG-IVQAINVETTICPTG-TPGNREAA 269 (513)
Q Consensus 204 ~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~-~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~-~~~~~~~~ 269 (513)
+.|.+||.. .+.+.+++..++..+... ++..+ ..+...+ .|+++++.+.+++.. ++.+.+.+
T Consensus 145 ~~p~i~G~~----~~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l 220 (466)
T 3l8k_A 145 AKLRLPGVE----YCLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTL 220 (466)
T ss_dssp CCCCCTTGG----GSBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHH
T ss_pred cCCCCCCcc----ceEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHH
Confidence 999999975 244555554222111111 11111 3444444 599999999999988 88888888
Q ss_pred HHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCC
Q 010331 270 LKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPL 349 (513)
Q Consensus 270 ~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~ 349 (513)
.+.++ |++++++.+.++...+. +.+.+.+.. ..++.+++++|.||+|+|.+|+
T Consensus 221 ~~~l~---v~i~~~~~v~~i~~~~~----------------------~~v~v~~~~--~~G~~~~i~~D~vi~a~G~~p~ 273 (466)
T 3l8k_A 221 LSILK---LNIKFNSPVTEVKKIKD----------------------DEYEVIYST--KDGSKKSIFTNSVVLAAGRRPV 273 (466)
T ss_dssp HHHHC---CCEECSCCEEEEEEEET----------------------TEEEEEECC--TTSCCEEEEESCEEECCCEEEC
T ss_pred HhcCE---EEEEECCEEEEEEEcCC----------------------CcEEEEEEe--cCCceEEEEcCEEEECcCCCcc
Confidence 88776 99999999999977431 233344421 0112348999999999999999
Q ss_pred CCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010331 350 LPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAA 423 (513)
Q Consensus 350 ~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~ 423 (513)
++ +... ..+++++++| |.||+++|+ +.|+|||+|||+.. |+++..|..||+++|.||.+.
T Consensus 274 ~~-l~l~---~~gl~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 274 IP-EGAR---EIGLSISKTG-IVVDETMKT-NIPNVFATGDANGL--------APYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp CC-TTTG---GGTCCBCSSS-BCCCTTCBC-SSTTEEECGGGTCS--------CCSHHHHHHHHHHHHHHHHTT
T ss_pred cc-cchh---hcCceeCCCC-EeECCCccC-CCCCEEEEEecCCC--------CccHhHHHHHHHHHHHHHhCC
Confidence 87 3211 4578889999 999999999 99999999999986 789999999999999999863
No 38
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.97 E-value=8.8e-31 Score=262.32 Aligned_cols=296 Identities=17% Similarity=0.177 Sum_probs=207.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCc-------hhhhhh-ccccCCcchHhHHHHhcCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-------LYELLS-GEVDAWEIAPRFADLLANT 150 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~-------~~~~~~-g~~~~~~~~~~~~~~~~~~ 150 (513)
+++|+|||||+||+++|..|++. +++|+|||+++.+..... ++.... ......++...+.+.+++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 78 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMR------GLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPF 78 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGG
T ss_pred cCcEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHc
Confidence 47999999999999999999984 569999999875422110 000000 0112234555666677777
Q ss_pred CeEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCC---CCCCCCCCCccccC-----CCCCCH
Q 010331 151 GVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGA---EPKLDVVPGAAEFA-----FPFSTL 221 (513)
Q Consensus 151 ~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs---~~~~~~ipG~~~~~-----~~~~~~ 221 (513)
+++++.+ +|+.++.++.. +.|.++++.++.||+||+|||+ .++.+++||..++. +.+++.
T Consensus 79 ~~~~~~~~~v~~i~~~~~~-----------~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~ 147 (335)
T 2zbw_A 79 NPVYSLGERAETLEREGDL-----------FKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSK 147 (335)
T ss_dssp CCEEEESCCEEEEEEETTE-----------EEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCG
T ss_pred CCEEEeCCEEEEEEECCCE-----------EEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCch
Confidence 8888765 89988765421 2477777878999999999999 57777888864321 112222
Q ss_pred HHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEE
Q 010331 222 EDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCI 289 (513)
Q Consensus 222 ~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i 289 (513)
++. . .++..+ ..|...+ .|+++++.+.+.+. +...+.+.+.+++.||++++++.+.++
T Consensus 148 ~~~---~-----~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~--~~~~~~l~~~l~~~gv~v~~~~~v~~i 217 (335)
T 2zbw_A 148 AEF---Q-----GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAH--EASVKELMKAHEEGRLEVLTPYELRRV 217 (335)
T ss_dssp GGG---T-----TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSC--HHHHHHHHHHHHTTSSEEETTEEEEEE
T ss_pred hhc---C-----CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCcc--HHHHHHHHhccccCCeEEecCCcceeE
Confidence 211 0 011111 3344444 49999988776543 456677788888999999999999999
Q ss_pred eccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCC
Q 010331 290 RRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARG 369 (513)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G 369 (513)
..++.. ..+.++. ..++ +.+++++|.||+|+|++|+++++.. .+++.+ +|
T Consensus 218 ~~~~~~---------------------~~v~~~~--~~~g-~~~~i~~D~vi~a~G~~p~~~~l~~-----~~~~~~-~g 267 (335)
T 2zbw_A 218 EGDERV---------------------RWAVVFH--NQTQ-EELALEVDAVLILAGYITKLGPLAN-----WGLALE-KN 267 (335)
T ss_dssp EESSSE---------------------EEEEEEE--TTTC-CEEEEECSEEEECCCEEEECGGGGG-----SCCCEE-TT
T ss_pred ccCCCe---------------------eEEEEEE--CCCC-ceEEEecCEEEEeecCCCCchHhhh-----cceecc-CC
Confidence 874310 1233321 1111 3378999999999999999877754 356666 79
Q ss_pred CeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCCCCCcccCCc
Q 010331 370 QAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNL 437 (513)
Q Consensus 370 ~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~~~~f~~~~~ 437 (513)
+|.||+++|+ +.|+|||+|||+..+. .++++..|+.||.++|+||.+.+.+.+..+|.|...
T Consensus 268 ~i~vd~~~~t-~~~~vya~GD~~~~~~-----~~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~~~~~ 329 (335)
T 2zbw_A 268 KIKVDTTMAT-SIPGVYACGDIVTYPG-----KLPLIVLGFGEAAIAANHAAAYANPALKVNPGHSSE 329 (335)
T ss_dssp EEECCTTCBC-SSTTEEECSTTEECTT-----CCCCHHHHHHHHHHHHHHHHHHHCTTSCSSCCCGGG
T ss_pred eeeeCCCCCC-CCCCEEEeccccccCc-----chhhhhhhHHHHHHHHHHHHHHhhhhhccCCccccc
Confidence 9999999998 8999999999998632 268999999999999999999999887777776543
No 39
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.97 E-value=4.6e-31 Score=263.43 Aligned_cols=288 Identities=17% Similarity=0.171 Sum_probs=193.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc---ccCCchhhhh--hccccCCcchHhHHHHhcCCCeE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF---VFKPMLYELL--SGEVDAWEIAPRFADLLANTGVQ 153 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~---~~~p~~~~~~--~g~~~~~~~~~~~~~~~~~~~v~ 153 (513)
+++|||||||+||+++|..|++. +++|+|||++..- .+........ .......++...+.+.+++.+++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~ 81 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA------QLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAK 81 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHc------CCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCE
Confidence 57999999999999999999984 4599999998321 0000000000 00112234555666777788999
Q ss_pred EEEEeEEEEeCC--CCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccccC-CCCCCHHHHHHHHHH
Q 010331 154 FFKDRVKLLCPS--DHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFA-FPFSTLEDACRVDRK 230 (513)
Q Consensus 154 ~~~~~V~~id~~--~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~ 230 (513)
++.++|+.++.+ .+. .+.|.+.+|.++.||+||+|||+.++.+.+||..++. ..+..... ....
T Consensus 82 ~~~~~v~~i~~~~~~~~----------~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~---~~~~ 148 (325)
T 2q7v_A 82 VEMDEVQGVQHDATSHP----------YPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCAT---CDGF 148 (325)
T ss_dssp EEECCEEEEEECTTSSS----------CCEEEEESSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHH---HHGG
T ss_pred EEeeeEEEEEeccCCCc----------eEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhccCceEEEecc---CCHH
Confidence 998999999865 320 0146666777899999999999999988899975421 11111111 0111
Q ss_pred HHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEecccccccc
Q 010331 231 LSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEAS 298 (513)
Q Consensus 231 l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~ 298 (513)
....++..+ ..+...+ .|+++++.+.+.. .+ ....+.+++.||++++++.+.++..++..
T Consensus 149 ~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--~~---~~~~~l~~~~gv~i~~~~~v~~i~~~~~v--- 220 (325)
T 2q7v_A 149 FYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA--NK---VAQARAFANPKMKFIWDTAVEEIQGADSV--- 220 (325)
T ss_dssp GGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS--CH---HHHHHHHTCTTEEEECSEEEEEEEESSSE---
T ss_pred HcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc--ch---HHHHHHHhcCCceEecCCceEEEccCCcE---
Confidence 100111111 3344433 5999998776532 22 22233344579999999999999874311
Q ss_pred ccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCcc
Q 010331 299 VKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLC 378 (513)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~ 378 (513)
.++.++. ..++ +..++++|.||+|+|++||++++.. . ++++++|+|.||++++
T Consensus 221 ------------------~~v~~~~--~~~g-~~~~i~~D~vi~a~G~~p~~~~l~~-----~-~~~~~~g~i~vd~~~~ 273 (325)
T 2q7v_A 221 ------------------SGVKLRN--LKTG-EVSELATDGVFIFIGHVPNTAFVKD-----T-VSLRDDGYVDVRDEIY 273 (325)
T ss_dssp ------------------EEEEEEE--TTTC-CEEEEECSEEEECSCEEESCGGGTT-----T-SCBCTTSCBCCBTTTB
T ss_pred ------------------EEEEEEE--CCCC-cEEEEEcCEEEEccCCCCChHHHhh-----h-cccCCCccEecCCCCc
Confidence 1333331 1111 2348999999999999999888764 2 5678889999999999
Q ss_pred ccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCC
Q 010331 379 VKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 428 (513)
Q Consensus 379 ~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~ 428 (513)
+ +.|+|||+|||+..+ ++++..|++||+.+|.||.+.+.+++
T Consensus 274 t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~~ 315 (325)
T 2q7v_A 274 T-NIPMLFAAGDVSDYI-------YRQLATSVGAGTRAAMMTERQLAALE 315 (325)
T ss_dssp C-SSTTEEECSTTTCSS-------CCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred c-CCCCEEEeecccCcc-------HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8 899999999999852 67899999999999999999987654
No 40
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.97 E-value=1e-30 Score=275.46 Aligned_cols=278 Identities=15% Similarity=0.150 Sum_probs=198.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhh-ccccCCCCCeEEEEeC--------CCCcccCC----chhh---------------hh
Q 010331 79 KPRICILGGGFGGLYTALRLES-LVWQDDKKPQVLLVDQ--------SERFVFKP----MLYE---------------LL 130 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~-~~~~~~~~~~V~lIe~--------~~~~~~~p----~~~~---------------~~ 130 (513)
++||||||||+||++||.+|++ .++ +|+|||+ +..+..+- ..|. ..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~------~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~ 76 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKK------RVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESA 76 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCC------CEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGG
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCC------EEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHH
Confidence 4799999999999999999998 655 9999992 22221100 0000 00
Q ss_pred -hc--------cccCCcc-----------hHhHHHHhcCC-CeEEEEEeEEEEeCCCCcCcCCCceeeccceEec---CC
Q 010331 131 -SG--------EVDAWEI-----------APRFADLLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLL---ES 186 (513)
Q Consensus 131 -~g--------~~~~~~~-----------~~~~~~~~~~~-~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~---~~ 186 (513)
.| ..+...+ ...+.+.+++. +++++.++++.++...- .+.. ++
T Consensus 77 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v-------------~v~~~~~~~ 143 (490)
T 1fec_A 77 GFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTV-------------LVRESADPN 143 (490)
T ss_dssp GGTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEE-------------EEESSSSTT
T ss_pred hcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEE-------------EEEeeccCC
Confidence 00 0011111 12234455677 99999999888864311 2322 25
Q ss_pred c---eEEEecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhc----CcE
Q 010331 187 G---LIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEK----GIV 248 (513)
Q Consensus 187 g---~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~----~~v 248 (513)
| .++.||+||||||++|..|.+||. +++ .+.+++..+... .++..+ ..+... ..|
T Consensus 144 g~~~~~~~~d~lviAtGs~p~~p~i~g~-~~~---~~~~~~~~~~~~---~~~vvViGgG~ig~E~A~~l~~~~~~g~~V 216 (490)
T 1fec_A 144 SAVLETLDTEYILLATGSWPQHLGIEGD-DLC---ITSNEAFYLDEA---PKRALCVGGGYISIEFAGIFNAYKARGGQV 216 (490)
T ss_dssp SCEEEEEEEEEEEECCCEEECCCCSBTG-GGC---BCHHHHTTCSSC---CSEEEEECSSHHHHHHHHHHHHHSCTTCEE
T ss_pred CCceEEEEcCEEEEeCCCCCCCCCCCCc-cce---ecHHHHhhhhhc---CCeEEEECCCHHHHHHHHHHHhhccCcCeE
Confidence 5 689999999999999998989986 332 344444322110 011111 333333 359
Q ss_pred EEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEeccccc
Q 010331 249 QAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIK 328 (513)
Q Consensus 249 tli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~ 328 (513)
+++++.+.+++.+++.+.+.+.+.++++||++++++.+.++..+++ +.+.+++.
T Consensus 217 tlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~----------------------~~~~v~~~---- 270 (490)
T 1fec_A 217 DLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNAD----------------------GTRHVVFE---- 270 (490)
T ss_dssp EEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTT----------------------SCEEEEET----
T ss_pred EEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC----------------------CEEEEEEC----
Confidence 9999999999999999999999999999999999999999986431 22445543
Q ss_pred CCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHH
Q 010331 329 GLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQV 408 (513)
Q Consensus 329 ~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~ 408 (513)
+|+++++|.||+|+|.+||++++... ..|++++++|+|.||+++|+ +.|+|||+|||+.. ++++..
T Consensus 271 --~G~~i~~D~vv~a~G~~p~~~~L~l~---~~gl~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~--------~~l~~~ 336 (490)
T 1fec_A 271 --SGAEADYDVVMLAIGRVPRSQTLQLE---KAGVEVAKNGAIKVDAYSKT-NVDNIYAIGDVTDR--------VMLTPV 336 (490)
T ss_dssp --TSCEEEESEEEECSCEEESCTTSCGG---GGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGGCS--------CCCHHH
T ss_pred --CCcEEEcCEEEEccCCCcCccccCch---hcCccCCCCCCEEECCCCcc-CCCCEEEEeccCCC--------ccCHHH
Confidence 56789999999999999998754211 35788888999999999998 89999999999975 679999
Q ss_pred HHHHHHHHHHHHHH
Q 010331 409 AFQQADFAGWNLWA 422 (513)
Q Consensus 409 A~~qg~~~a~ni~~ 422 (513)
|.+||+++|.||.+
T Consensus 337 A~~~g~~aa~~i~g 350 (490)
T 1fec_A 337 AINEGAAFVDTVFA 350 (490)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999975
No 41
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.97 E-value=5.5e-31 Score=277.01 Aligned_cols=282 Identities=18% Similarity=0.217 Sum_probs=197.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC-------C---chh------hhh----h-cc----
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY------ELL----S-GE---- 133 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~-------p---~~~------~~~----~-g~---- 133 (513)
++||||||||+||+++|..|++. +++|+|||+++.+... | ++. ... . |.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~------G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~ 78 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQL------GFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNG 78 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC------CCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 47999999999999999999984 4599999996643211 0 000 000 0 00
Q ss_pred ---ccCCcc-----------hHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCc--eE------EE
Q 010331 134 ---VDAWEI-----------APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LI------VE 191 (513)
Q Consensus 134 ---~~~~~~-----------~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g--~~------i~ 191 (513)
.+..++ ...+.+.+++.+++++.++...++.+. ..|.+.+| .+ ++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~-------------v~V~~~~G~~~~~~~~~~i~ 145 (478)
T 1v59_A 79 DIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETK-------------IRVTPVDGLEGTVKEDHILD 145 (478)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSE-------------EEEECCTTCTTCCSSCEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCe-------------EEEEecCCCcccccccceEE
Confidence 000011 111334556679999988655442211 14555565 46 99
Q ss_pred ecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecC
Q 010331 192 YDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICP 259 (513)
Q Consensus 192 yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~ 259 (513)
||+||+|||+.+. .+||.......+.+.+++..+... -++..+ ..+...+ .|+++++.+.+++
T Consensus 146 ~d~lViAtGs~p~--~~~g~~~~~~~v~~~~~~~~~~~~---~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 220 (478)
T 1v59_A 146 VKNIIVATGSEVT--PFPGIEIDEEKIVSSTGALSLKEI---PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA 220 (478)
T ss_dssp EEEEEECCCEEEC--CCTTCCCCSSSEECHHHHTTCSSC---CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS
T ss_pred eCEEEECcCCCCC--CCCCCCCCCceEEcHHHHHhhhcc---CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc
Confidence 9999999999873 456653222335566665443221 011111 3444444 5999999999999
Q ss_pred CCChhHHHHHHHHHHhCCcEEEcCceeeEEec--cccccccccCCCcccccccccccCCCceEEEecccccCCcceEEee
Q 010331 260 TGTPGNREAALKVLSARKVQLVLGYFVRCIRR--VGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEA 337 (513)
Q Consensus 260 ~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~a 337 (513)
.+++.+.+.+.+.+++.||++++++.+.++.. ++ +.+.+.+....+ ++++++++
T Consensus 221 ~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-----------------------~~~~v~~~~~~~-g~~~~~~~ 276 (478)
T 1v59_A 221 SMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDK-----------------------NVVEIVVEDTKT-NKQENLEA 276 (478)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTT-----------------------TEEEEEEEETTT-TEEEEEEE
T ss_pred ccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCC-----------------------CeEEEEEEEcCC-CCceEEEC
Confidence 99999999999999999999999999999976 32 233344321111 25678999
Q ss_pred ceEEEecCCCCCCC--CCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHH
Q 010331 338 DLVLWTVGSKPLLP--HVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADF 415 (513)
Q Consensus 338 D~vi~a~G~~p~~~--~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~ 415 (513)
|.||+|+|.+||++ ++.. .+++++++|+|.||+++|+ +.|+|||+|||+.. ++++..|.+||++
T Consensus 277 D~vv~a~G~~p~~~~l~l~~-----~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~~~g~~ 342 (478)
T 1v59_A 277 EVLLVAVGRRPYIAGLGAEK-----IGLEVDKRGRLVIDDQFNS-KFPHIKVVGDVTFG--------PMLAHKAEEEGIA 342 (478)
T ss_dssp SEEEECSCEEECCTTSCTTT-----TTCCBCTTSCBCCCTTSBC-SSTTEEECGGGSSS--------CCCHHHHHHHHHH
T ss_pred CEEEECCCCCcCCCCCCchh-----cCceeCCCCCEeECcCCcc-CCCCEEEeeccCCC--------cccHHHHHHHHHH
Confidence 99999999999987 4543 4678888999999999998 89999999999986 6789999999999
Q ss_pred HHHHHHH
Q 010331 416 AGWNLWA 422 (513)
Q Consensus 416 ~a~ni~~ 422 (513)
+|.||.+
T Consensus 343 aa~~i~~ 349 (478)
T 1v59_A 343 AVEMLKT 349 (478)
T ss_dssp HHHHHHH
T ss_pred HHHHHcC
Confidence 9999987
No 42
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.97 E-value=4.9e-31 Score=278.06 Aligned_cols=276 Identities=18% Similarity=0.245 Sum_probs=197.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhh-ccccCCCCCeEEEEeC--------CCCcccC-------C---chh-----h----hh
Q 010331 79 KPRICILGGGFGGLYTALRLES-LVWQDDKKPQVLLVDQ--------SERFVFK-------P---MLY-----E----LL 130 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~-~~~~~~~~~~V~lIe~--------~~~~~~~-------p---~~~-----~----~~ 130 (513)
++||||||||+||++||.+|++ .++ +|+|||+ +..+..+ | +++ . ..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~------~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~ 80 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGK------RVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESA 80 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCC------CEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCC------eEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHH
Confidence 4799999999999999999998 655 9999992 2221110 1 000 0 00
Q ss_pred h-c--------cccCCcch-----------HhHHHHhcCC-CeEEEEEeEEEEeCCCCcCcCCCceeeccceEecC---C
Q 010331 131 S-G--------EVDAWEIA-----------PRFADLLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLE---S 186 (513)
Q Consensus 131 ~-g--------~~~~~~~~-----------~~~~~~~~~~-~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~---~ 186 (513)
. | ..+..++. ..+...+++. +++++.++++.++.. +|.++ +
T Consensus 81 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~---------------~v~v~~~~~ 145 (495)
T 2wpf_A 81 GFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKN---------------VVVVRETAD 145 (495)
T ss_dssp TTTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETT---------------EEEEESSSS
T ss_pred hcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCC---------------EEEEeecCC
Confidence 0 0 00111111 1223345567 999999988888642 24443 4
Q ss_pred -----ceEEEecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhc---C-
Q 010331 187 -----GLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEK---G- 246 (513)
Q Consensus 187 -----g~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~---~- 246 (513)
+++++||+||||||++|..|.+||. +++ .+.+++..+... .++..+ ..+... +
T Consensus 146 ~~~~~~~~~~~d~lViATGs~p~~p~i~G~-~~~---~~~~~~~~~~~~---~~~vvViGgG~ig~E~A~~l~~~~~~g~ 218 (495)
T 2wpf_A 146 PKSAVKERLQADHILLATGSWPQMPAIPGI-EHC---ISSNEAFYLPEP---PRRVLTVGGGFISVEFAGIFNAYKPPGG 218 (495)
T ss_dssp TTSCEEEEEEEEEEEECCCEEECCCCCTTG-GGC---EEHHHHTTCSSC---CSEEEEECSSHHHHHHHHHHHHHCCTTC
T ss_pred ccCCCCeEEEcCEEEEeCCCCcCCCCCCCc-ccc---ccHHHHHhhhhc---CCeEEEECCCHHHHHHHHHHHhhCCCCC
Confidence 6689999999999999999999997 332 233343322110 011111 333333 3
Q ss_pred cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEeccc
Q 010331 247 IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPA 326 (513)
Q Consensus 247 ~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~ 326 (513)
.|+++++.+.+++.+++.+.+.+.+.|+++||++++++.|.++..+++ +.+.+++.
T Consensus 219 ~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~----------------------~~~~v~~~-- 274 (495)
T 2wpf_A 219 KVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTD----------------------GSKHVTFE-- 274 (495)
T ss_dssp EEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTT----------------------SCEEEEET--
T ss_pred eEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC----------------------ceEEEEEC--
Confidence 599999999999999999999999999999999999999999986431 22445543
Q ss_pred ccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCch
Q 010331 327 IKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATA 406 (513)
Q Consensus 327 ~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a 406 (513)
+|+++++|.||+|+|.+||++++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. ++++
T Consensus 275 ----~G~~i~~D~vv~a~G~~p~~~~L~l~---~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~--------~~l~ 338 (495)
T 2wpf_A 275 ----SGKTLDVDVVMMAIGRIPRTNDLQLG---NVGVKLTPKGGVQVDEFSRT-NVPNIYAIGDITDR--------LMLT 338 (495)
T ss_dssp ----TSCEEEESEEEECSCEEECCGGGTGG---GTTCCBCTTSSBCCCTTCBC-SSTTEEECGGGGCS--------CCCH
T ss_pred ----CCcEEEcCEEEECCCCcccccccchh---hcCccCCCCCCEEECCCCcc-CCCCEEEEeccCCC--------ccCH
Confidence 66789999999999999998754211 34788888999999999998 89999999999975 6789
Q ss_pred HHHHHHHHHHHHHHHH
Q 010331 407 QVAFQQADFAGWNLWA 422 (513)
Q Consensus 407 ~~A~~qg~~~a~ni~~ 422 (513)
..|.+||+++|.||..
T Consensus 339 ~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 339 PVAINEGAALVDTVFG 354 (495)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999999975
No 43
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.97 E-value=4.3e-31 Score=275.45 Aligned_cols=275 Identities=19% Similarity=0.273 Sum_probs=199.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC------C---chh-----hhhh------c------
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK------P---MLY-----ELLS------G------ 132 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~------p---~~~-----~~~~------g------ 132 (513)
++||||||||+||+++|.+|++. +.+|+|||+++..... | ++. .... +
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~------g~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~ 77 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMY------GQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTIN 77 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT------TCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhC------CCeEEEEcCCCCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCC
Confidence 47999999999999999999984 5599999997521000 0 000 0000 0
Q ss_pred cccCC-----------cchHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCC
Q 010331 133 EVDAW-----------EIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGA 201 (513)
Q Consensus 133 ~~~~~-----------~~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs 201 (513)
..+.. .+...+...+++.+++++.++++.++.. .|.+ ++++++||+||||||+
T Consensus 78 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~---------------~v~~-~g~~~~~d~lviAtGs 141 (450)
T 1ges_A 78 KFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAK---------------TLEV-NGETITADHILIATGG 141 (450)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETT---------------EEEE-TTEEEEEEEEEECCCE
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCC---------------EEEE-CCEEEEeCEEEECCCC
Confidence 00000 1112233445667999999988777642 3555 5678999999999999
Q ss_pred CCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHH
Q 010331 202 EPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAA 269 (513)
Q Consensus 202 ~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~ 269 (513)
+|..|++||. ++ +.+.+++..+... .++..+ ..+...+ .|+++++.+.+++.+++.+.+.+
T Consensus 142 ~p~~p~i~g~-~~---~~~~~~~~~~~~~---~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l 214 (450)
T 1ges_A 142 RPSHPDIPGV-EY---GIDSDGFFALPAL---PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETL 214 (450)
T ss_dssp EECCCCSTTG-GG---SBCHHHHHHCSSC---CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHH
T ss_pred CCCCCCCCCc-cc---eecHHHhhhhhhc---CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHHHHHH
Confidence 9999999997 33 2344454333210 011111 3444444 59999999999999999999999
Q ss_pred HHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCC
Q 010331 270 LKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPL 349 (513)
Q Consensus 270 ~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~ 349 (513)
.+.+++.||++++++.+.+++.+++ +.+.+.+. +|+++++|.||+|+|.+|+
T Consensus 215 ~~~l~~~Gv~i~~~~~v~~i~~~~~----------------------~~~~v~~~------~g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 215 VEVMNAEGPQLHTNAIPKAVVKNTD----------------------GSLTLELE------DGRSETVDCLIWAIGREPA 266 (450)
T ss_dssp HHHHHHHSCEEECSCCEEEEEECTT----------------------SCEEEEET------TSCEEEESEEEECSCEEES
T ss_pred HHHHHHCCCEEEeCCEEEEEEEeCC----------------------cEEEEEEC------CCcEEEcCEEEECCCCCcC
Confidence 9999999999999999999986431 22445543 6678999999999999999
Q ss_pred CCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010331 350 LPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 350 ~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
++++.. +..|++++++|+|.||+++|+ +.|+|||+|||+.. ++++..|.+||+++|.||.+
T Consensus 267 ~~~l~~---~~~gl~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 267 NDNINL---EAAGVKTNEKGYIVVDKYQNT-NIEGIYAVGDNTGA--------VELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp CTTSCH---HHHTCCBCTTSCBCCCTTSBC-SSTTEEECSGGGTS--------CCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCc---hhcCceECCCCCEeECCCCcc-CCCCEEEEeccCCC--------CccHHHHHHHHHHHHHHHcC
Confidence 875421 134688888999999999997 89999999999875 67899999999999999985
No 44
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.97 E-value=2.7e-31 Score=282.05 Aligned_cols=302 Identities=17% Similarity=0.212 Sum_probs=210.5
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC----Cchhhh--------------------hhcc
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK----PMLYEL--------------------LSGE 133 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~----p~~~~~--------------------~~g~ 133 (513)
.++||||||||+||+++|.+|++. +.+|+|||+++.+... ...+.. ....
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~------G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~ 115 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM------GGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDM 115 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHH
Confidence 457999999999999999999984 4599999998742111 000000 0000
Q ss_pred cc----CCcchHhH----H---HHh-----cCCCeEEE-EEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEE
Q 010331 134 VD----AWEIAPRF----A---DLL-----ANTGVQFF-KDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196 (513)
Q Consensus 134 ~~----~~~~~~~~----~---~~~-----~~~~v~~~-~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LV 196 (513)
.. .+++...+ . +++ ++.+++++ .++++.++.. .|.++ +.++.||+||
T Consensus 116 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~---------------~v~~~-g~~~~~d~lV 179 (523)
T 1mo9_A 116 TEKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNH---------------TVEAA-GKVFKAKNLI 179 (523)
T ss_dssp TTCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETT---------------EEEET-TEEEEBSCEE
T ss_pred HhhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCC---------------EEEEC-CEEEEeCEEE
Confidence 00 11122222 2 455 67889998 7788888642 35554 5689999999
Q ss_pred EeCCCCCCCCCCCCccccCCCCCCHHHHH-HHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCCh
Q 010331 197 LSLGAEPKLDVVPGAAEFAFPFSTLEDAC-RVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTP 263 (513)
Q Consensus 197 lAtGs~~~~~~ipG~~~~~~~~~~~~~a~-~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~ 263 (513)
+|||+++..|++||.... .+.+.+++. .+.... .++..+ ..+...+ .|+++++.+.+++.+++
T Consensus 180 iATGs~p~~p~i~G~~~~--~v~~~~~~~~~l~~~~--g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~ 255 (523)
T 1mo9_A 180 LAVGAGPGTLDVPGVNAK--GVFDHATLVEELDYEP--GSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDN 255 (523)
T ss_dssp ECCCEECCCCCSTTTTSB--TEEEHHHHHHHCCSCC--CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSH
T ss_pred ECCCCCCCCCCCCCcccC--cEeeHHHHHHHHHhcC--CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccccH
Confidence 999999999999997542 122444443 221100 011111 3444444 59999999999999999
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCc---eEEEecccccCCcce-EEeece
Q 010331 264 GNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDK---YILELQPAIKGLESQ-IFEADL 339 (513)
Q Consensus 264 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~v~~~~~~~~~~g~-~i~aD~ 339 (513)
.+.+.+.+.+++.||++++++.|.++..+++ +. +.+++. +|+ +++||.
T Consensus 256 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~----------------------~~v~~~~v~~~------~G~~~i~aD~ 307 (523)
T 1mo9_A 256 ETRAYVLDRMKEQGMEIISGSNVTRIEEDAN----------------------GRVQAVVAMTP------NGEMRIETDF 307 (523)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEECTT----------------------SBEEEEEEEET------TEEEEEECSC
T ss_pred HHHHHHHHHHHhCCcEEEECCEEEEEEEcCC----------------------CceEEEEEEEC------CCcEEEEcCE
Confidence 9999999999999999999999999986431 21 445543 566 899999
Q ss_pred EEEecCCCCCCC-CCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHH
Q 010331 340 VLWTVGSKPLLP-HVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGW 418 (513)
Q Consensus 340 vi~a~G~~p~~~-~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ 418 (513)
||+|+|.+||++ ++. ..|++++++|+|.||+++|+ +.|+|||+|||+.. ++++..|.+||+++|.
T Consensus 308 Vv~A~G~~p~~~~~l~-----~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~~~g~~aa~ 373 (523)
T 1mo9_A 308 VFLGLGEQPRSAELAK-----ILGLDLGPKGEVLVNEYLQT-SVPNVYAVGDLIGG--------PMEMFKARKSGCYAAR 373 (523)
T ss_dssp EEECCCCEECCHHHHH-----HHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGCS--------SCSHHHHHHHHHHHHH
T ss_pred EEECcCCccCCccCHH-----HcCCccCCCCCEEECCCCcc-CCCCEEEEeecCCC--------cccHHHHHHHHHHHHH
Confidence 999999999976 554 34678888999999999998 89999999999986 6789999999999999
Q ss_pred HHHHHHCC--CCCCCcccCCceeEEEecCCC
Q 010331 419 NLWAAIND--RPLLPFRFQNLGEMMILGRND 447 (513)
Q Consensus 419 ni~~~l~~--~~~~~f~~~~~g~~~~lG~~~ 447 (513)
||.+.-.. ....|+.......+.++|...
T Consensus 374 ~i~g~~~~~~~~~~p~~~~~~~~~a~vG~~e 404 (523)
T 1mo9_A 374 NVMGEKISYTPKNYPDFLHTHYEVSFLGMGE 404 (523)
T ss_dssp HHTTCCCCCCCCSCCEEEESSSEEEEEECCH
T ss_pred HHcCCCCCCCCCCCCeEEECCCceEEEeCCH
Confidence 99752110 111233322223677777543
No 45
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.97 E-value=2.8e-31 Score=278.20 Aligned_cols=279 Identities=19% Similarity=0.169 Sum_probs=199.9
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC-------C---chh-----hhhh------c-----c
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY-----ELLS------G-----E 133 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~-------p---~~~-----~~~~------g-----~ 133 (513)
+||||||||+||+++|..|++. +++|+|||++.. ... | ++. ..+. | .
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~------G~~V~liE~~~~-gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~ 76 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQL------GLSTAIVEPKYW-GGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVT 76 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCT-THHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCE
T ss_pred CCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCC-CCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 6899999999999999999984 559999999732 100 0 000 0000 0 0
Q ss_pred ccCCc-----------chHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCc--eEEEecEEEEeCC
Q 010331 134 VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVLSLG 200 (513)
Q Consensus 134 ~~~~~-----------~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g--~~i~yD~LVlAtG 200 (513)
.+... +...+.+.+++.+++++.+.+..++.+. ..|.+++| .+++||+||+|||
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~-------------v~V~~~~G~~~~~~~d~lViAtG 143 (464)
T 2a8x_A 77 FDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANT-------------LLVDLNDGGTESVTFDNAIIATG 143 (464)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSE-------------EEEEETTSCCEEEEEEEEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCe-------------EEEEeCCCceEEEEcCEEEECCC
Confidence 00000 1112345566679999988765543221 14566667 6899999999999
Q ss_pred CCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHH
Q 010331 201 AEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREA 268 (513)
Q Consensus 201 s~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~ 268 (513)
+.+..|++||.... +.+.+++..+... .++..+ ..+...+ .|+++++.+++++.+++.+.+.
T Consensus 144 ~~~~~~~~~g~~~~---~~~~~~~~~~~~~---~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~ 217 (464)
T 2a8x_A 144 SSTRLVPGTSLSAN---VVTYEEQILSREL---PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKE 217 (464)
T ss_dssp EEECCCTTCCCBTT---EECHHHHHTCSSC---CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHH
T ss_pred CCCCCCCCCCCCce---EEecHHHhhcccc---CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHH
Confidence 99988888886543 3455555433210 011111 3344444 5999999999999999999999
Q ss_pred HHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCC
Q 010331 269 ALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKP 348 (513)
Q Consensus 269 ~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p 348 (513)
+.+.++++||++++++.+.++..++ +.+.+.+. ..++++++++|.||+|+|.+|
T Consensus 218 l~~~l~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~---~~g~~~~~~~D~vv~a~G~~p 271 (464)
T 2a8x_A 218 IEKQFKKLGVTILTATKVESIADGG-----------------------SQVTVTVT---KDGVAQELKAEKVLQAIGFAP 271 (464)
T ss_dssp HHHHHHHHTCEEECSCEEEEEEECS-----------------------SCEEEEEE---SSSCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHcCCEEEeCcEEEEEEEcC-----------------------CeEEEEEE---cCCceEEEEcCEEEECCCCCc
Confidence 9999999999999999999998744 33445442 111337899999999999999
Q ss_pred CCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010331 349 LLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 349 ~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
|++++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. ++++..|.+||+++|.||.+
T Consensus 272 ~~~~l~~~---~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 272 NVEGYGLD---KAGVALTDRKAIGVDDYMRT-NVGHIYAIGDVNGL--------LQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp CCSSSCHH---HHTCCBCTTSSBCCCTTSBC-SSTTEEECGGGGCS--------SCSHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCch---hcCCccCCCCCEeECcCCcc-CCCCEEEeECcCCC--------ccCHHHHHHHHHHHHHHhcC
Confidence 98875311 34678888899999999998 89999999999986 67899999999999999975
No 46
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.97 E-value=6.9e-31 Score=260.33 Aligned_cols=289 Identities=15% Similarity=0.094 Sum_probs=196.4
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEE-EeCCCC---cccCCchhhhh--hccccCCcchHhHHHHhcCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLL-VDQSER---FVFKPMLYELL--SGEVDAWEIAPRFADLLANTG 151 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~l-Ie~~~~---~~~~p~~~~~~--~g~~~~~~~~~~~~~~~~~~~ 151 (513)
.++||||||||+||++||..|++.+ ++|+| +|+... +.+...++.+. .......++...+.+++++.+
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g------~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGG------LKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFG 76 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHT------CSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCC------CCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 3579999999999999999999954 59999 999432 11111111111 111233456677788888899
Q ss_pred eEEEEEeEEEEeCCC--CcCcCCCceeeccceE-ecCCceEEEecEEEEeCCCCCCCCCCCCccccCC-CCCCHHHHHHH
Q 010331 152 VQFFKDRVKLLCPSD--HLGVNGPMACTHGGTV-LLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTLEDACRV 227 (513)
Q Consensus 152 v~~~~~~V~~id~~~--~~~~~~~~v~~~~~~v-~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~~-~~~~~~~a~~l 227 (513)
++++.++|+.+ ++. +. +.+ ...++ ++.||+||+|||+.++.|.+||..++.. .+..... .
T Consensus 77 v~~~~~~v~~i-~~~~~~~-----------~~v~~~~~~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~---~ 140 (315)
T 3r9u_A 77 LKHEMVGVEQI-LKNSDGS-----------FTIKLEGGK-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCAT---C 140 (315)
T ss_dssp CEEECCCEEEE-EECTTSC-----------EEEEETTSC-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHH---H
T ss_pred cEEEEEEEEEE-ecCCCCc-----------EEEEEecCC-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeec---c
Confidence 99999999998 443 21 132 22334 8999999999999999999999754211 1111111 1
Q ss_pred HHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccc
Q 010331 228 DRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEF 295 (513)
Q Consensus 228 ~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~ 295 (513)
.......++..+ ..+...+ .|+++++.+.+.. . .+...+.+++.||++++++.+.++..+++.
T Consensus 141 ~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~--~---~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~ 215 (315)
T 3r9u_A 141 DGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA--A---PSTVEKVKKNEKIELITSASVDEVYGDKMG 215 (315)
T ss_dssp HGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS--C---HHHHHHHHHCTTEEEECSCEEEEEEEETTE
T ss_pred cccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC--C---HHHHHHHHhcCCeEEEeCcEEEEEEcCCCc
Confidence 111000011111 3344433 5999988776522 2 234456667899999999999999775410
Q ss_pred cccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCC-CccCCCCCeEeC
Q 010331 296 EASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHD-LPLNARGQAETD 374 (513)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~-~~~~~~G~i~Vd 374 (513)
. ..+.++.. ++ +..++++|.||+|+|.+|+++++.... ..+ ++++++|+|.||
T Consensus 216 ~--------------------~~v~~~~~---~g-~~~~~~~D~vv~a~G~~p~~~~~~~~~--~~g~l~~~~~g~i~vd 269 (315)
T 3r9u_A 216 V--------------------AGVKVKLK---DG-SIRDLNVPGIFTFVGLNVRNEILKQDD--SKFLCNMEEGGQVSVD 269 (315)
T ss_dssp E--------------------EEEEEECT---TS-CEEEECCSCEEECSCEEECCGGGBCTT--SCBSSCBCTTSCBCCC
T ss_pred E--------------------EEEEEEcC---CC-CeEEeecCeEEEEEcCCCCchhhhccc--ccceeeecCCCcEEeC
Confidence 0 12334311 11 234899999999999999988776421 345 788899999999
Q ss_pred CCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCC
Q 010331 375 ETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 427 (513)
Q Consensus 375 ~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~ 427 (513)
+++|+ +.|+|||+|||+.. .|+++..|+.||+.+|.||.+.+.++
T Consensus 270 ~~~~t-~~~~v~a~GD~~~~-------~~~~~~~A~~~g~~aa~~i~~~l~~~ 314 (315)
T 3r9u_A 270 LKMQT-SVAGLFAAGDLRKD-------APKQVICAAGDGAVAALSAMAYIESL 314 (315)
T ss_dssp TTCBC-SSTTEEECGGGBTT-------CCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccc-CCCCEEEeecccCC-------chhhhhhHHhhHHHHHHHHHHHHHhc
Confidence 99999 89999999999864 17899999999999999999988653
No 47
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.97 E-value=7.7e-31 Score=275.87 Aligned_cols=285 Identities=16% Similarity=0.195 Sum_probs=200.8
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc---C---C---chh-----hhh-----hc------
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF---K---P---MLY-----ELL-----SG------ 132 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~---~---p---~~~-----~~~-----~g------ 132 (513)
.++||+|||||+||++||..|++. +++|+|||++..-.. . | ++. ... .|
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~------G~~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~ 92 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL------GARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEG 92 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCC
Confidence 358999999999999999999995 459999998752100 0 0 000 000 00
Q ss_pred cccC-----------CcchHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCC
Q 010331 133 EVDA-----------WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGA 201 (513)
Q Consensus 133 ~~~~-----------~~~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs 201 (513)
..+. +.+...+...++..+++++.+++..++.... .|. .++.++.||+||||||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~-------------~v~-~~g~~~~~d~lviAtG~ 158 (478)
T 3dk9_A 93 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKP-------------TIE-VSGKKYTAPHILIATGG 158 (478)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSC-------------EEE-ETTEEEECSCEEECCCE
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeE-------------EEE-ECCEEEEeeEEEEccCC
Confidence 0000 0111223344556799999998888765543 355 35568999999999999
Q ss_pred CCCCC---CCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHH
Q 010331 202 EPKLD---VVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNR 266 (513)
Q Consensus 202 ~~~~~---~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~ 266 (513)
++..| ++||.. + +.+.++...+... .++..+ ..+...+ .|+++++.+.+++.+++.+.
T Consensus 159 ~p~~p~~~~i~G~~-~---~~~~~~~~~~~~~---~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~ 231 (478)
T 3dk9_A 159 MPSTPHESQIPGAS-L---GITSDGFFQLEEL---PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMIS 231 (478)
T ss_dssp EECCCCTTTSTTGG-G---SBCHHHHTTCCSC---CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHH
T ss_pred CCCCCCcCCCCCCc-e---eEchHHhhchhhc---CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCHHHH
Confidence 99988 899964 2 1233332222110 001111 3334434 59999999999999999999
Q ss_pred HHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCC-ceEEEecccccCC-cceEEeeceEEEec
Q 010331 267 EAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSD-KYILELQPAIKGL-ESQIFEADLVLWTV 344 (513)
Q Consensus 267 ~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~v~~~~~~~~~-~g~~i~aD~vi~a~ 344 (513)
+.+.+.|++.||++++++.+.+++..++ + .+.+.+.+...+. +++++++|.||+|+
T Consensus 232 ~~~~~~l~~~gv~i~~~~~v~~i~~~~~----------------------~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~ 289 (478)
T 3dk9_A 232 TNCTEELENAGVEVLKFSQVKEVKKTLS----------------------GLEVSMVTAVPGRLPVMTMIPDVDCLLWAI 289 (478)
T ss_dssp HHHHHHHHHTTCEEETTEEEEEEEECSS----------------------SEEEEEEECCTTSCCEEEEEEEESEEEECS
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEEEcCC----------------------CcEEEEEEccCCCCcccceEEEcCEEEEee
Confidence 9999999999999999999999986431 1 2444443211111 13789999999999
Q ss_pred CCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010331 345 GSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAA 423 (513)
Q Consensus 345 G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~ 423 (513)
|++|+++.+... ..|++++++|+|.||+++++ +.|+|||+|||+.. |+++..|..||+++|.||.+.
T Consensus 290 G~~p~~~~l~l~---~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 290 GRVPNTKDLSLN---KLGIQTDDKGHIIVDEFQNT-NVKGIYAVGDVCGK--------ALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp CEEESCTTSCGG---GGTCCBCTTCCBCCCTTCBC-SSTTEEECGGGGCS--------SCCHHHHHHHHHHHHHHHHSC
T ss_pred ccccCCCCCCch---hcCCeeCCCCCEeeCCCccc-CCCCEEEEEecCCC--------CccHhHHHHHHHHHHHHHcCC
Confidence 999998755321 45788899999999999998 89999999999965 789999999999999999863
No 48
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.97 E-value=1.3e-30 Score=272.79 Aligned_cols=274 Identities=21% Similarity=0.285 Sum_probs=199.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc------CC---chh-----hhh-----hcc------
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF------KP---MLY-----ELL-----SGE------ 133 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~------~p---~~~-----~~~-----~g~------ 133 (513)
++||||||||+||+++|.+|++. +.+|+|||+++.-.. .| ++. ... .|.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~------g~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~ 77 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAF------GKRVALIESKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGT 77 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---
T ss_pred cCcEEEECCCHHHHHHHHHHHhC------CCcEEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCC
Confidence 47999999999999999999984 559999999752100 00 000 000 010
Q ss_pred ccCC-----------cchHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCC
Q 010331 134 VDAW-----------EIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAE 202 (513)
Q Consensus 134 ~~~~-----------~~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~ 202 (513)
.+.. .+...+...+++.+++++.+++..++.. .|.+ ++.+++||+||||||++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~---------------~v~~-~g~~~~~d~lviAtGs~ 141 (463)
T 2r9z_A 78 LDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAH---------------TIEV-EGQRLSADHIVIATGGR 141 (463)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETT---------------EEEE-TTEEEEEEEEEECCCEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCC---------------EEEE-CCEEEEcCEEEECCCCC
Confidence 0000 1111233445667999999988777532 3555 56689999999999999
Q ss_pred CCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHH
Q 010331 203 PKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAAL 270 (513)
Q Consensus 203 ~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~ 270 (513)
|..|++||. ++ +.+.+++..+... .++..+ ..+...+ .|+++++.+.+++.+++.+.+.+.
T Consensus 142 p~~p~i~G~-~~---~~~~~~~~~~~~~---~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~ 214 (463)
T 2r9z_A 142 PIVPRLPGA-EL---GITSDGFFALQQQ---PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLA 214 (463)
T ss_dssp ECCCSCTTG-GG---SBCHHHHHHCSSC---CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHH
T ss_pred CCCCCCCCc-cc---eecHHHHhhhhcc---CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccccCHHHHHHHH
Confidence 999999997 33 2344444332211 011111 3444444 599999999999989999999999
Q ss_pred HHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcce-EEeeceEEEecCCCCC
Q 010331 271 KVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQ-IFEADLVLWTVGSKPL 349 (513)
Q Consensus 271 ~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~-~i~aD~vi~a~G~~p~ 349 (513)
+.+++.||++++++.+.+++.++ +++.+++. +|+ ++++|.||+|+|.+|+
T Consensus 215 ~~l~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~------~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 215 ENMHAQGIETHLEFAVAALERDA-----------------------QGTTLVAQ------DGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp HHHHHTTCEEESSCCEEEEEEET-----------------------TEEEEEET------TCCEEEEESEEEECSCEEES
T ss_pred HHHHHCCCEEEeCCEEEEEEEeC-----------------------CeEEEEEe------CCcEEEEcCEEEECCCCCcC
Confidence 99999999999999999998643 23445543 566 8999999999999999
Q ss_pred CCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010331 350 LPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 350 ~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
++++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. +.++..|.+||+++|.||.+
T Consensus 266 ~~~l~~~---~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 266 TRDLGLE---AAGIEVQSNGMVPTDAYQNT-NVPGVYALGDITGR--------DQLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp CTTSCHH---HHTCCCCTTSCCCCCTTSBC-SSTTEEECGGGGTS--------CCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCch---hcCCccCCCCCEeECCCCcc-CCCCEEEEeecCCC--------cccHHHHHHHHHHHHHHHcC
Confidence 8755211 34678888999999999998 89999999999875 67899999999999999975
No 49
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.97 E-value=6.5e-31 Score=276.58 Aligned_cols=281 Identities=18% Similarity=0.205 Sum_probs=197.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC-------C---chh---------hhh-hcc-----
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY---------ELL-SGE----- 133 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~-------p---~~~---------~~~-~g~----- 133 (513)
++||||||||+||+++|..|++. +.+|+|||+++.+... | ++. ... .|.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~------G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~ 79 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADE------GLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEP 79 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 47999999999999999999984 5599999997643211 0 000 000 000
Q ss_pred -ccCCcch-----------HhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCc------------eE
Q 010331 134 -VDAWEIA-----------PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG------------LI 189 (513)
Q Consensus 134 -~~~~~~~-----------~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g------------~~ 189 (513)
.+...+. ..+...+++.+++++.+++..++... + .|.+.+| .+
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~--------v-----~v~~~~g~~~~~~~~~g~~~~ 146 (482)
T 1ojt_A 80 ELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHH--------L-----EVSLTAGDAYEQAAPTGEKKI 146 (482)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTE--------E-----EEEEEEEEETTEEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCE--------E-----EEEecCCcccccccccCcceE
Confidence 0001111 11334556679999998766554321 1 2333344 57
Q ss_pred EEecEEEEeCCCCCCCCC-CCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCe
Q 010331 190 VEYDWLVLSLGAEPKLDV-VPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETT 256 (513)
Q Consensus 190 i~yD~LVlAtGs~~~~~~-ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ 256 (513)
++||+||+|||+.+..|+ +| ... .+.+.+++..+... .++..+ ..+...+ .|+++++.++
T Consensus 147 i~ad~lViAtGs~p~~~~~i~-~~~---~v~~~~~~~~~~~~---~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 147 VAFKNCIIAAGSRVTKLPFIP-EDP---RIIDSSGALALKEV---PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG 219 (482)
T ss_dssp EEEEEEEECCCEEECCCSSCC-CCT---TEECHHHHTTCCCC---CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred EEcCEEEECCCCCCCCCCCCC-ccC---cEEcHHHHhccccc---CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 999999999999987766 55 222 23455555433211 011111 3344433 5999999999
Q ss_pred ecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEe
Q 010331 257 ICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFE 336 (513)
Q Consensus 257 ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~ 336 (513)
+++.+++.+.+.+.+.|+++||++++++.+.+++.++ +.+.+.+.+. +.++++++
T Consensus 220 ~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-----------------------~~~~v~~~~~--~~~g~~~~ 274 (482)
T 1ojt_A 220 LMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE-----------------------DGVYVTFEGA--NAPKEPQR 274 (482)
T ss_dssp SSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEET-----------------------TEEEEEEESS--SCCSSCEE
T ss_pred cccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcC-----------------------CeEEEEEecc--CCCceEEE
Confidence 9999999999999999999999999999999998643 3344444310 11266799
Q ss_pred eceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHH
Q 010331 337 ADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFA 416 (513)
Q Consensus 337 aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~ 416 (513)
+|.||+|+|.+||++++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. ++++..|.+||+++
T Consensus 275 ~D~vv~a~G~~p~~~~l~~~---~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~l~~~A~~~g~~a 342 (482)
T 1ojt_A 275 YDAVLVAAGRAPNGKLISAE---KAGVAVTDRGFIEVDKQMRT-NVPHIYAIGDIVGQ--------PMLAHKAVHEGHVA 342 (482)
T ss_dssp ESCEEECCCEEECGGGTTGG---GTTCCCCTTSCCCCCTTSBC-SSTTEEECGGGTCS--------SCCHHHHHHHHHHH
T ss_pred cCEEEECcCCCcCCCCCChh---hcCceeCCCCCEeeCCCccc-CCCCEEEEEcccCC--------CccHHHHHHHHHHH
Confidence 99999999999998775211 34788888899999999998 89999999999986 67899999999999
Q ss_pred HHHHHH
Q 010331 417 GWNLWA 422 (513)
Q Consensus 417 a~ni~~ 422 (513)
|.||.+
T Consensus 343 a~~i~g 348 (482)
T 1ojt_A 343 AENCAG 348 (482)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 999975
No 50
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.97 E-value=1.5e-30 Score=274.48 Aligned_cols=285 Identities=18% Similarity=0.216 Sum_probs=199.4
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCc----hh-----------h-h----hhccccCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM----LY-----------E-L----LSGEVDAW 137 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~----~~-----------~-~----~~g~~~~~ 137 (513)
+++||+|||||+||++||..|++. +++|+|||+++.+..... .+ . . ........
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~------G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~ 97 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQL------GMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVA 97 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC------CCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccC
Confidence 458999999999999999999994 459999998764422100 00 0 0 00000000
Q ss_pred ------------------cchHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCc--eEEEecEEEE
Q 010331 138 ------------------EIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVL 197 (513)
Q Consensus 138 ------------------~~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g--~~i~yD~LVl 197 (513)
.+...+...+++.+++++.+.+..+++... .|.+++| .++.||+|||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~-------------~v~~~~g~~~~~~~d~lVi 164 (491)
T 3urh_A 98 NPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKV-------------SVTNEKGEEQVLEAKNVVI 164 (491)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEE-------------EEECTTSCEEEEECSEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEE-------------EEEeCCCceEEEEeCEEEE
Confidence 011223445566799999998877654332 4666666 5799999999
Q ss_pred eCCCCCCCCCCCCccc--cCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCCh
Q 010331 198 SLGAEPKLDVVPGAAE--FAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTP 263 (513)
Q Consensus 198 AtGs~~~~~~ipG~~~--~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~ 263 (513)
|||+++ +.+||..+ ....+.+.+++..+... .++..+ ..+...+ .|+++++.+.+++.+++
T Consensus 165 ATGs~p--~~ipg~~~~~~~~~~~~~~~~~~~~~~---~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~ 239 (491)
T 3urh_A 165 ATGSDV--AGIPGVEVAFDEKTIVSSTGALALEKV---PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGMDG 239 (491)
T ss_dssp CCCEEC--CCBTTBCCCCCSSSEECHHHHTSCSSC---CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSSCH
T ss_pred ccCCCC--CCCCCcccccCCeeEEehhHhhhhhhc---CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccCCH
Confidence 999985 45777642 11223333333221110 001111 3333333 59999999999999999
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEe
Q 010331 264 GNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWT 343 (513)
Q Consensus 264 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a 343 (513)
.+.+.+.+.+++.||++++++.+.++..++ +.+.+.+.+...+ +.+++++|.||+|
T Consensus 240 ~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~-----------------------~~~~v~~~~~~~g-~~~~i~~D~Vi~a 295 (491)
T 3urh_A 240 EVAKQLQRMLTKQGIDFKLGAKVTGAVKSG-----------------------DGAKVTFEPVKGG-EATTLDAEVVLIA 295 (491)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEET-----------------------TEEEEEEEETTSC-CCEEEEESEEEEC
T ss_pred HHHHHHHHHHHhCCCEEEECCeEEEEEEeC-----------------------CEEEEEEEecCCC-ceEEEEcCEEEEe
Confidence 999999999999999999999999998754 3444444321111 3478999999999
Q ss_pred cCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010331 344 VGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 344 ~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
+|++|+++++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. |+++..|..||+++|.||.+
T Consensus 296 ~G~~p~~~~l~l~---~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 296 TGRKPSTDGLGLA---KAGVVLDSRGRVEIDRHFQT-SIAGVYAIGDVVRG--------PMLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp CCCEECCTTSCHH---HHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSS--------CCCHHHHHHHHHHHHHHHTT
T ss_pred eCCccCCCccCch---hcCceECCCCCEeECCCCCC-CCCCEEEEEecCCC--------ccchhHHHHHHHHHHHHHcC
Confidence 9999998775321 34788899999999999998 89999999999976 78999999999999999975
No 51
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.97 E-value=1e-30 Score=259.35 Aligned_cols=286 Identities=14% Similarity=0.096 Sum_probs=194.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC--------chhhhh--hccccCCcchHhHHHHhc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP--------MLYELL--SGEVDAWEIAPRFADLLA 148 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p--------~~~~~~--~g~~~~~~~~~~~~~~~~ 148 (513)
.+|||||||||||++||.+|++++ ++|+|||+.......+ .++.+. .......++...+.+.+.
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g------~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~ 77 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSS------LKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSE 77 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT------CCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC------CCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHh
Confidence 589999999999999999999954 5999999976321111 111110 111223355666777777
Q ss_pred CCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccccC-CCCCCHHHHHHH
Q 010331 149 NTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFA-FPFSTLEDACRV 227 (513)
Q Consensus 149 ~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~l 227 (513)
+.++++....+..+....+. ..+.++++.++.||+||||||++|+.|++||.+... ............
T Consensus 78 ~~~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~ 146 (314)
T 4a5l_A 78 KYGTTIITETIDHVDFSTQP-----------FKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGA 146 (314)
T ss_dssp HTTCEEECCCEEEEECSSSS-----------EEEEETTCCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTT
T ss_pred hcCcEEEEeEEEEeecCCCc-----------eEEEECCCeEEEEeEEEEcccccccccCCCccccccccceeeehhhhhh
Confidence 88899888888877655431 246677788999999999999999999999975321 111111111111
Q ss_pred HHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccc
Q 010331 228 DRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEF 295 (513)
Q Consensus 228 ~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~ 295 (513)
.. ....++..+ ..+...+ .|+++++...... . .....+.....+++.+....+.++......
T Consensus 147 ~~-~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 220 (314)
T 4a5l_A 147 VP-IFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA--S---KTMQERVLNHPKIEVIWNSELVELEGDGDL 220 (314)
T ss_dssp SG-GGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS--C---HHHHHHHHTCTTEEEECSEEEEEEEESSSS
T ss_pred hh-hcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc--c---chhhhhhhcccceeeEeeeeeEEEEeeeec
Confidence 10 000111111 3444444 4999987655432 1 233445667788999998888888764421
Q ss_pred cccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCC
Q 010331 296 EASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDE 375 (513)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~ 375 (513)
. .++.++. . ...+++++++|.|++++|.+||++++.. .+.++++|.| ||+
T Consensus 221 ~--------------------~~~~~~~--~-~~~~~~~i~~d~vi~a~G~~pn~~~l~~------~~~~~~~G~i-v~~ 270 (314)
T 4a5l_A 221 L--------------------NGAKIHN--L-VSGEYKVVPVAGLFYAIGHSPNSKFLGG------QVKTADDGYI-LTE 270 (314)
T ss_dssp E--------------------EEEEEEE--T-TTCCEEEEECSEEEECSCEEESCGGGTT------SSCBCTTSCB-CCB
T ss_pred c--------------------ceeEEee--c-ccccceeeccccceEecccccChhHhcc------cceEcCCeeE-eCC
Confidence 1 2333321 1 1236789999999999999999988864 3667888876 888
Q ss_pred CccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHC
Q 010331 376 TLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 425 (513)
Q Consensus 376 ~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~ 425 (513)
++|| +.|+|||+|||+..+ .+++..|+.||+.+|.++...|+
T Consensus 271 ~~~T-s~pgIyA~GDv~~~~-------~~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 271 GPKT-SVDGVFACGDVCDRV-------YRQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp TTBC-SSTTEEECSTTTCSS-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-CCCCEEEEEeccCCc-------chHHHHHHHHHHHHHHHHHHHHh
Confidence 9998 899999999999862 46888999999999999988774
No 52
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.97 E-value=4.8e-30 Score=256.18 Aligned_cols=283 Identities=17% Similarity=0.172 Sum_probs=200.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc-----CCc--hhhhhh-ccccCCcchHhHHHHhcCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF-----KPM--LYELLS-GEVDAWEIAPRFADLLANT 150 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~-----~p~--~~~~~~-g~~~~~~~~~~~~~~~~~~ 150 (513)
+++|||||||+||+++|..|++ .+++|+|||+++.+.. .|. +..... ......++...+.+.+++.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM------RQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKF 80 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTS
T ss_pred cceEEEECCCHHHHHHHHHHHH------CCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHh
Confidence 4799999999999999999998 4569999999875321 110 000100 0112345667777888888
Q ss_pred CeEEEE-EeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCC---CCCCCCCCCccccC----C-CCCCH
Q 010331 151 GVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGA---EPKLDVVPGAAEFA----F-PFSTL 221 (513)
Q Consensus 151 ~v~~~~-~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs---~~~~~~ipG~~~~~----~-~~~~~ 221 (513)
+++++. .+|+.++.+.+. .+.|.+++++ +.||+||+|||+ .++.+.+||..++. + .+.+.
T Consensus 81 ~~~~~~~~~v~~i~~~~~~----------~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~~~~~~ 149 (332)
T 3lzw_A 81 DQTICLEQAVESVEKQADG----------VFKLVTNEET-HYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHYFVDDL 149 (332)
T ss_dssp CCEEECSCCEEEEEECTTS----------CEEEEESSEE-EEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEESSCSCG
T ss_pred CCcEEccCEEEEEEECCCC----------cEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCCChhhccCceEEEecCCH
Confidence 999986 699999876530 1257778885 999999999999 88888899976511 1 12211
Q ss_pred HHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEE
Q 010331 222 EDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCI 289 (513)
Q Consensus 222 ~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i 289 (513)
. .+. .++..+ ..+...+ .|+++++...+.+. +...+.|++.||++++++.+.++
T Consensus 150 ~---~~~-----~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~------~~~~~~l~~~gv~~~~~~~v~~i 215 (332)
T 3lzw_A 150 Q---KFA-----GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH------EHSVENLHASKVNVLTPFVPAEL 215 (332)
T ss_dssp G---GGB-----TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC------HHHHHHHHHSSCEEETTEEEEEE
T ss_pred H---HcC-----CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc------HHHHHHHhcCCeEEEeCceeeEE
Confidence 1 110 001110 3333333 49999988766332 12235578999999999999999
Q ss_pred eccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCC
Q 010331 290 RRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARG 369 (513)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G 369 (513)
..++ +...+.+.+...+ +++++++|.||+|+|++|+++++.. .+++. ++|
T Consensus 216 ~~~~-----------------------~~~~v~~~~~~~g-~~~~~~~D~vv~a~G~~p~~~~~~~-----~~~~~-~~g 265 (332)
T 3lzw_A 216 IGED-----------------------KIEQLVLEEVKGD-RKEILEIDDLIVNYGFVSSLGPIKN-----WGLDI-EKN 265 (332)
T ss_dssp ECSS-----------------------SCCEEEEEETTSC-CEEEEECSEEEECCCEECCCGGGGG-----SSCCE-ETT
T ss_pred ecCC-----------------------ceEEEEEEecCCC-ceEEEECCEEEEeeccCCCchHHhh-----cCccc-cCC
Confidence 8754 2222333321122 4678999999999999999887664 35666 689
Q ss_pred CeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCC
Q 010331 370 QAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 428 (513)
Q Consensus 370 ~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~ 428 (513)
+|.||+++++ +.|+|||+|||+..+. .++++..|+.||+.+|.||.+.+.++.
T Consensus 266 ~i~vd~~~~t-~~~~vya~GD~~~~~~-----~~~~~~~A~~~g~~aa~~i~~~l~~~~ 318 (332)
T 3lzw_A 266 SIVVKSTMET-NIEGFFAAGDICTYEG-----KVNLIASGFGEAPTAVNNAKAYMDPKA 318 (332)
T ss_dssp EEECCTTSBC-SSTTEEECGGGEECTT-----CCCCHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred eEEeCCCCce-ecCCEEEccceecCCC-----CcceEeeehhhHHHHHHHHHHhhChhh
Confidence 9999999998 8999999999997632 278999999999999999999998764
No 53
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.97 E-value=2.3e-30 Score=256.39 Aligned_cols=288 Identities=15% Similarity=0.141 Sum_probs=195.5
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC--cccCCchhhhhhc-cccCCcchHhHHHHhcCCCeEEEE
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER--FVFKPMLYELLSG-EVDAWEIAPRFADLLANTGVQFFK 156 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~--~~~~p~~~~~~~g-~~~~~~~~~~~~~~~~~~~v~~~~ 156 (513)
++|||||||+||+++|..|++. +++|+|||+... ....+.++.+... .....++...+.+.+++.+++++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~------g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 75 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARK------GIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVID 75 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT------TCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEEC
T ss_pred CCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEc
Confidence 6899999999999999999984 569999987431 1111111111111 111234556677777788999999
Q ss_pred E-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccccCC-CCCCHHHHHHHHHHHHHH
Q 010331 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTLEDACRVDRKLSEL 234 (513)
Q Consensus 157 ~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~~-~~~~~~~a~~l~~~l~~~ 234 (513)
+ +|+.++++.+. . ..+.|.+++|.++.||+||+|||+.+..|.+||..++.. .+..... +.......
T Consensus 76 ~~~v~~i~~~~~~-~-------~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~ 144 (310)
T 1fl2_A 76 SQSASKLIPAAVE-G-------GLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPH---CDGPLFKG 144 (310)
T ss_dssp SCCEEEEECCSST-T-------CCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHH---HHGGGGBT
T ss_pred cCEEEEEEecccC-C-------ceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeEEecc---CcHhhcCC
Confidence 8 99999865320 0 012577778888999999999999998888999754311 1111111 11111000
Q ss_pred HhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHh-CCcEEEcCceeeEEeccccccccccC
Q 010331 235 ERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSA-RKVQLVLGYFVRCIRRVGEFEASVKQ 301 (513)
Q Consensus 235 ~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~~~~~~~~ 301 (513)
++..+ ..|...+ .|+++++.+.+. .. +.+.+.+++ .||++++++.+.++..++
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~----~~~~~~l~~~~gv~v~~~~~v~~i~~~~-------- 210 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK--AD----QVLQDKLRSLKNVDIILNAQTTEVKGDG-------- 210 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--SC----HHHHHHHHTCTTEEEESSEEEEEEEESS--------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--cc----HHHHHHHhhCCCeEEecCCceEEEEcCC--------
Confidence 11111 3444433 599999877652 22 345566666 699999999999998643
Q ss_pred CCcccccccccccCCCce-EEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCcccc
Q 010331 302 PESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVK 380 (513)
Q Consensus 302 ~~~~~~~~~~~~~~~~~v-~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~ 380 (513)
+.+ .+.+.+...+ +..++++|.||+|+|++||++++.. .++++++|+|.||+++|+
T Consensus 211 ---------------~~v~~v~~~~~~~g-~~~~i~~D~vi~a~G~~p~~~~l~~------~l~~~~~g~i~vd~~~~t- 267 (310)
T 1fl2_A 211 ---------------SKVVGLEYRDRVSG-DIHNIELAGIFVQIGLLPNTNWLEG------AVERNRMGEIIIDAKCET- 267 (310)
T ss_dssp ---------------SSEEEEEEEETTTC-CEEEEECSEEEECSCEEESCGGGTT------TSCBCTTSCBCCCTTCBC-
T ss_pred ---------------CcEEEEEEEECCCC-cEEEEEcCEEEEeeCCccCchHHhc------cccccCCCcEEcCCCCcc-
Confidence 222 2333211111 2357999999999999999888763 266788899999999997
Q ss_pred CCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCC
Q 010331 381 GHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 428 (513)
Q Consensus 381 ~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~ 428 (513)
+.|+|||+|||+..+ ++++..|+.||+.+|.||.+.+.++.
T Consensus 268 ~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~~ 308 (310)
T 1fl2_A 268 NVKGVFAAGDCTTVP-------YKQIIIATGEGAKASLSAFDYLIRTK 308 (310)
T ss_dssp SSTTEEECSTTBSCS-------SCCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEeecccCCc-------chhhhhhHhhHHHHHHHHHHHHHHhc
Confidence 899999999999862 46889999999999999999887643
No 54
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.97 E-value=2.2e-30 Score=256.61 Aligned_cols=286 Identities=15% Similarity=0.144 Sum_probs=194.4
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCCCCc---ccCCchhhhh--hccccCCcchHhHHHHhcCCCeE
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSERF---VFKPMLYELL--SGEVDAWEIAPRFADLLANTGVQ 153 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~~~~---~~~p~~~~~~--~g~~~~~~~~~~~~~~~~~~~v~ 153 (513)
++|+|||||+||+++|..|++ .++ +|+|||++..- .+......+. .......++...+.+.+++.+++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~------~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 75 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR------GGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLK 75 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH------TTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCE
T ss_pred ceEEEECccHHHHHHHHHHHH------CCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCE
Confidence 689999999999999999998 467 99999996421 1111111010 01122234556667777788999
Q ss_pred EEEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCcccc----CCCCCCHHHHHHHHH
Q 010331 154 FFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEF----AFPFSTLEDACRVDR 229 (513)
Q Consensus 154 ~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~----~~~~~~~~~a~~l~~ 229 (513)
++.++|+.++.+.+. ..|.+.++.+++||+||+|||+.++.|.+||..++ .+.+...+.
T Consensus 76 ~~~~~v~~i~~~~~~-----------~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~------ 138 (311)
T 2q0l_A 76 HEMTAVQRVSKKDSH-----------FVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDG------ 138 (311)
T ss_dssp EECSCEEEEEEETTE-----------EEEEETTSCEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHHG------
T ss_pred EEEEEEEEEEEcCCE-----------EEEEEcCCCEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCCh------
Confidence 988899999765431 14666777789999999999999998999986532 121211111
Q ss_pred HHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHH-hCCcEEEcCceeeEEecccccc
Q 010331 230 KLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLS-ARKVQLVLGYFVRCIRRVGEFE 296 (513)
Q Consensus 230 ~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~-~~gV~v~~~~~v~~i~~~~~~~ 296 (513)
.....++..+ ..+...+ .|+++++.+.+. ..+ .+.+.+. +.||++++++.+.++..+++..
T Consensus 139 ~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~----~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v 212 (311)
T 2q0l_A 139 FFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR--CAP----ITLEHAKNNDKIEFLTPYVVEEIKGDASGV 212 (311)
T ss_dssp GGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC--SCH----HHHHHHHTCTTEEEETTEEEEEEEEETTEE
T ss_pred hhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC--CCH----HHHHHHhhCCCeEEEeCCEEEEEECCCCcE
Confidence 1100111111 3344444 599998877652 222 2334444 5799999999999998642100
Q ss_pred ccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCC
Q 010331 297 ASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDET 376 (513)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~ 376 (513)
..+.++. ..++ +..++++|.||+|+|++|+++++...+. ..+++++++|+|.||++
T Consensus 213 --------------------~~v~~~~--~~~g-~~~~i~~D~vi~a~G~~p~~~~l~~~g~-~~~l~~~~~g~i~vd~~ 268 (311)
T 2q0l_A 213 --------------------SSLSIKN--TATN-EKRELVVPGFFIFVGYDVNNAVLKQEDN-SMLCKCDEYGSIVVDFS 268 (311)
T ss_dssp --------------------EEEEEEE--TTTC-CEEEEECSEEEECSCEEECCGGGBCTTS-CBSSCBCTTSCBCCCTT
T ss_pred --------------------eEEEEEe--cCCC-ceEEEecCEEEEEecCccChhhhhcccc-cceeEeccCCCEEeCCc
Confidence 1233331 1111 2347999999999999999888865321 12377888999999999
Q ss_pred ccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCC
Q 010331 377 LCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 426 (513)
Q Consensus 377 l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~ 426 (513)
+|+ +.|+|||+|||+..+ ++++..|+.||+.+|.||.+.+.+
T Consensus 269 ~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~ 310 (311)
T 2q0l_A 269 MKT-NVQGLFAAGDIRIFA-------PKQVVCAASDGATAALSVISYLEH 310 (311)
T ss_dssp CBC-SSTTEEECSTTBTTC-------CCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccc-CCCCeEEcccccCcc-------hHHHHHHHHhHHHHHHHHHHHHhh
Confidence 998 899999999999852 689999999999999999988754
No 55
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.97 E-value=4e-30 Score=272.67 Aligned_cols=288 Identities=15% Similarity=0.158 Sum_probs=197.9
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc------CCc------hh-----------h----hh
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF------KPM------LY-----------E----LL 130 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~------~p~------~~-----------~----~~ 130 (513)
..+||+|||||+||++||..|++. +.+|+|||+++...+ ... .+ . ..
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~------G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~ 104 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQY------GKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSR 104 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHH
Confidence 357999999999999999999995 459999998541100 000 00 0 00
Q ss_pred -hcc-------ccCCc-----------chHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCce--E
Q 010331 131 -SGE-------VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGL--I 189 (513)
Q Consensus 131 -~g~-------~~~~~-----------~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~--~ 189 (513)
.|. .+... +...+...++..+++++.+++..+++... .|.+++|. +
T Consensus 105 ~~g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v-------------~v~~~~g~~~~ 171 (519)
T 3qfa_A 105 NYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRI-------------KATNNKGKEKI 171 (519)
T ss_dssp HTTBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEE-------------EEECTTCCCCE
T ss_pred hcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEE-------------EEEcCCCCEEE
Confidence 000 00000 11122234556799999999988876543 46666664 7
Q ss_pred EEecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCee
Q 010331 190 VEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTI 257 (513)
Q Consensus 190 i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~l 257 (513)
+.||+||||||++|+.|++||..++.. +.+++..+.... ++.++ ..+...+ .|+++++ ..+
T Consensus 172 i~~d~lViATGs~p~~p~i~G~~~~~~---t~~~~~~l~~~~---~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~-~~~ 244 (519)
T 3qfa_A 172 YSAERFLIATGERPRYLGIPGDKEYCI---SSDDLFSLPYCP---GKTLVVGASYVALECAGFLAGIGLDVTVMVR-SIL 244 (519)
T ss_dssp EEEEEEEECCCEEECCCCCTTHHHHCB---CHHHHTTCSSCC---CSEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCS
T ss_pred EECCEEEEECCCCcCCCCCCCccCceE---cHHHHhhhhhcC---CeEEEECCcHHHHHHHHHHHHcCCeEEEEec-ccc
Confidence 999999999999999999999755432 333332221100 11111 3444444 5999988 478
Q ss_pred cCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEee
Q 010331 258 CPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEA 337 (513)
Q Consensus 258 l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~a 337 (513)
++.+++.+.+.+.+.|++.||++++++.+.++....+.. .+.+.+++... ++....++++
T Consensus 245 l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~-------------------~~~~~v~~~~~-~g~~~~~~~~ 304 (519)
T 3qfa_A 245 LRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGT-------------------PGRLRVVAQST-NSEEIIEGEY 304 (519)
T ss_dssp STTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCT-------------------TCEEEEEEEES-SSSCEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCC-------------------CceEEEEEEEC-CCcEEEEEEC
Confidence 899999999999999999999999999888876633100 02333433211 1111246899
Q ss_pred ceEEEecCCCCCCCCCCCCCCccCCCccC-CCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHH
Q 010331 338 DLVLWTVGSKPLLPHVEPPNNRLHDLPLN-ARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFA 416 (513)
Q Consensus 338 D~vi~a~G~~p~~~~l~~~~~~~~~~~~~-~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~ 416 (513)
|.||+|+|++||++++... ..+++++ ++|+|.||+++|+ +.|+|||+|||+.. .++++..|..||+++
T Consensus 305 D~vi~a~G~~p~~~~l~l~---~~gl~~~~~~G~I~Vd~~~~T-s~~~IyA~GD~~~g-------~~~~~~~A~~~g~~a 373 (519)
T 3qfa_A 305 NTVMLAIGRDACTRKIGLE---TVGVKINEKTGKIPVTDEEQT-NVPYIYAIGDILED-------KVELTPVAIQAGRLL 373 (519)
T ss_dssp SEEEECSCEEESCSSSCST---TTTCCCCTTTCCBCCCTTSBC-SSTTEEECGGGBSS-------SCCCHHHHHHHHHHH
T ss_pred CEEEEecCCcccCCCCChh---hcCcEEcCCCCeEeeCCCCcc-CCCCEEEEEeccCC-------CCccHHHHHHHHHHH
Confidence 9999999999998875322 3478888 6899999999998 89999999999842 178999999999999
Q ss_pred HHHHHH
Q 010331 417 GWNLWA 422 (513)
Q Consensus 417 a~ni~~ 422 (513)
|+||.+
T Consensus 374 a~~i~g 379 (519)
T 3qfa_A 374 AQRLYA 379 (519)
T ss_dssp HHHHHS
T ss_pred HHHHcC
Confidence 999985
No 56
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.97 E-value=2.1e-30 Score=271.44 Aligned_cols=274 Identities=19% Similarity=0.256 Sum_probs=198.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC----Cchhh---------------hhh-c------
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK----PMLYE---------------LLS-G------ 132 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~----p~~~~---------------~~~-g------ 132 (513)
++||+|||||+||+++|..|++. +++|+|||+.. .... ...+. ... |
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~------G~~V~liEk~~-~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~ 77 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAAL------GKKVAIAEEFR-YGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGES 77 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT------TCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCC
T ss_pred CCcEEEECcCHHHHHHHHHHHhC------CCEEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 47999999999999999999984 55999999943 1100 00000 000 0
Q ss_pred cccCC-----------cchHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEec-CCceEEEecEEEEeCC
Q 010331 133 EVDAW-----------EIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLL-ESGLIVEYDWLVLSLG 200 (513)
Q Consensus 133 ~~~~~-----------~~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~-~~g~~i~yD~LVlAtG 200 (513)
..+.. .+...+..+++..+++++.+++..++.. .+.+ +++.++.||+||+|||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~---------------~v~~~~~~~~~~~d~lviAtG 142 (463)
T 4dna_A 78 RFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPN---------------TVKLLASGKTVTAERIVIAVG 142 (463)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSS---------------EEEETTTTEEEEEEEEEECCC
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCC---------------EEEEecCCeEEEeCEEEEecC
Confidence 00000 1122234445566899999988777532 3555 4677899999999999
Q ss_pred CCCC-CCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHH
Q 010331 201 AEPK-LDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNRE 267 (513)
Q Consensus 201 s~~~-~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~ 267 (513)
+++. .|.+||.. + +.+.+++..+... .++..+ ..+...+ .|+++++.+.+++.+++.+.+
T Consensus 143 ~~p~~~p~i~G~~-~---~~~~~~~~~~~~~---~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~~~ 215 (463)
T 4dna_A 143 GHPSPHDALPGHE-L---CITSNEAFDLPAL---PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRR 215 (463)
T ss_dssp EEECCCTTSTTGG-G---CBCHHHHTTCSSC---CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHH
T ss_pred CCcccCCCCCCcc-c---cccHHHHhhhhcC---CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHH
Confidence 9999 89999964 2 2233333222110 000000 3333433 599999999999999999999
Q ss_pred HHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEE-ecccccCCcceEEeeceEEEecCC
Q 010331 268 AALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILE-LQPAIKGLESQIFEADLVLWTVGS 346 (513)
Q Consensus 268 ~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~-~~~~~~~~~g~~i~aD~vi~a~G~ 346 (513)
.+.+.+++.||++++++.|.++..+++ +.+.+. +. +|+ +++|.||+|+|.
T Consensus 216 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~----------------------~~~~v~~~~------~g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 216 GLHAAMEEKGIRILCEDIIQSVSADAD----------------------GRRVATTMK------HGE-IVADQVMLALGR 266 (463)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECTT----------------------SCEEEEESS------SCE-EEESEEEECSCE
T ss_pred HHHHHHHHCCCEEECCCEEEEEEEcCC----------------------CEEEEEEcC------CCe-EEeCEEEEeeCc
Confidence 999999999999999999999987541 223454 43 566 999999999999
Q ss_pred CCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010331 347 KPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 347 ~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
+|++.++... ..|++++++|+|.||+++|+ +.|+|||+|||+.. ++++..|..||+++|.||.+
T Consensus 267 ~p~~~~l~l~---~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~--------~~~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 267 MPNTNGLGLE---AAGVRTNELGAIIVDAFSRT-STPGIYALGDVTDR--------VQLTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp EESCTTSSTG---GGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGSS--------CCCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCCCcc---ccCceECCCCCEeECcCCCC-CCCCEEEEEecCCC--------CCChHHHHHHHHHHHHHHcC
Confidence 9998875321 45788999999999999997 89999999999986 78999999999999999985
No 57
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.97 E-value=3.7e-30 Score=256.16 Aligned_cols=286 Identities=19% Similarity=0.147 Sum_probs=192.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc---cCCchhhhhh-ccccCCcchHhHHHHhcCCCeEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV---FKPMLYELLS-GEVDAWEIAPRFADLLANTGVQF 154 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~---~~p~~~~~~~-g~~~~~~~~~~~~~~~~~~~v~~ 154 (513)
.++|||||||+||+++|..|++. +++|+|||+..... +.+.+..+.. ......++...+.+.+++.++++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 89 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARS------GFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIR 89 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHhC------CCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEE
Confidence 47999999999999999999984 45999999954211 0110000000 11122344556667777889999
Q ss_pred EEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccccC-CCCCCHHHHHHHHHHHHH
Q 010331 155 FKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFA-FPFSTLEDACRVDRKLSE 233 (513)
Q Consensus 155 ~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~l~~ 233 (513)
+.++|+.++.+.+. ..|.+ ++.++.||+||+|+|+.++.+++||..++. ..+...... ......
T Consensus 90 ~~~~v~~i~~~~~~-----------~~v~~-~~~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~---~~~~~~ 154 (319)
T 3cty_A 90 EGVEVRSIKKTQGG-----------FDIET-NDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTC---DGYLFK 154 (319)
T ss_dssp ETCCEEEEEEETTE-----------EEEEE-SSSEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHH---HGGGGB
T ss_pred EEeeEEEEEEeCCE-----------EEEEE-CCCEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEec---chhhcC
Confidence 88899999764431 13555 455899999999999999988888864421 111111110 000000
Q ss_pred HHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccC
Q 010331 234 LERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQ 301 (513)
Q Consensus 234 ~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~ 301 (513)
.++..+ ..+...+ .|+++++.+.+.. . +.+.+.+.+.||++++++.+.++..++...
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~--~----~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v----- 223 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC--E----NAYVQEIKKRNIPYIMNAQVTEIVGDGKKV----- 223 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS--C----HHHHHHHHHTTCCEECSEEEEEEEESSSSE-----
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC--C----HHHHHHHhcCCcEEEcCCeEEEEecCCceE-----
Confidence 011111 3333333 5999988766532 2 334566778999999999999998743100
Q ss_pred CCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccC
Q 010331 302 PESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKG 381 (513)
Q Consensus 302 ~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~ 381 (513)
.++.++. ..++ +..++++|.||+|+|+.||++++.. .+++++++|+|.||+++++ +
T Consensus 224 ---------------~~v~~~~--~~~g-~~~~i~~D~vi~a~G~~p~~~~l~~-----~gl~~~~~g~i~vd~~~~t-~ 279 (319)
T 3cty_A 224 ---------------TGVKYKD--RTTG-EEKLIETDGVFIYVGLIPQTSFLKD-----SGVKLDERGYIVVDSRQRT-S 279 (319)
T ss_dssp ---------------EEEEEEE--TTTC-CEEEECCSEEEECCCEEECCGGGTT-----SCCCBCTTSCBCCCTTCBC-S
T ss_pred ---------------EEEEEEE--cCCC-ceEEEecCEEEEeeCCccChHHHhh-----ccccccCCccEeCCCCCcc-C
Confidence 1233321 1111 2347999999999999999888764 3577888999999999997 8
Q ss_pred CCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCC
Q 010331 382 HPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 427 (513)
Q Consensus 382 ~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~ 427 (513)
.|+|||+|||+..+ ++++..|+.||+.+|.||.+.+.++
T Consensus 280 ~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~ 318 (319)
T 3cty_A 280 VPGVYAAGDVTSGN-------FAQIASAVGDGCKAALSLYSDSISK 318 (319)
T ss_dssp STTEEECSTTBTTC-------CCCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCCEEEeecccCcc-------hhhHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999852 5789999999999999999998764
No 58
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.97 E-value=1e-30 Score=258.53 Aligned_cols=279 Identities=13% Similarity=0.116 Sum_probs=184.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC-Cchhhhhh-ccccCCcchHhHHHHhcCC-CeEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-PMLYELLS-GEVDAWEIAPRFADLLANT-GVQFF 155 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~-p~~~~~~~-g~~~~~~~~~~~~~~~~~~-~v~~~ 155 (513)
++|||||||||||++||.+|++. +++|+|||++..-... ...+.+.. ....+.++.....+.+.++ ++.+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~------g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRA------RKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYY 79 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEE
T ss_pred CcCEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEE
Confidence 57999999999999999999995 4599999997532110 01111111 0122234444444444444 57777
Q ss_pred EEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccccC-CCCCCHHHHHHHHHHHHHH
Q 010331 156 KDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFA-FPFSTLEDACRVDRKLSEL 234 (513)
Q Consensus 156 ~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~l~~~ 234 (513)
...+..++..... .+++.+.+++++.||+||||||++|+.|++||..+.. ..+.......... .. .
T Consensus 80 ~~~~~~~~~~~~~----------~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~~--~~-~ 146 (304)
T 4fk1_A 80 EKTVVMITKQSTG----------LFEIVTKDHTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGWE--LK-D 146 (304)
T ss_dssp ECCEEEEEECTTS----------CEEEEETTCCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSGG--GT-T
T ss_pred eeEEEEeeecCCC----------cEEEEECCCCEEEeCEEEEccCCccccccccCccccccceeeeccccchhH--hc-C
Confidence 7788777644321 1257788888999999999999999999999975421 1111111110000 00 0
Q ss_pred HhhhH------------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccC
Q 010331 235 ERRNF------------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQ 301 (513)
Q Consensus 235 ~~~~v------------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~ 301 (513)
++..+ ..+...+ .++++.+...+ .+...+.|+++|++++.+. +.++..++.
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~--------~~~~~~~l~~~g~~~~~~~-v~~~~~~~~------- 210 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNEL--------SQTIMDELSNKNIPVITES-IRTLQGEGG------- 210 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCC--------CHHHHHHHHTTTCCEECSC-EEEEESGGG-------
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEeccccc--------hhhhhhhhhccceeEeeee-EEEeecCCC-------
Confidence 01110 2223333 47777665433 2455677889999998764 666655431
Q ss_pred CCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccC
Q 010331 302 PESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKG 381 (513)
Q Consensus 302 ~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~ 381 (513)
....+++. +++++++|.+|+++|..|++.++. ..+++++++|+|.||+++|| +
T Consensus 211 ---------------~~~~v~~~------~g~~i~~~~~vi~~g~~~~~~~~~-----~~g~~~~~~G~I~vd~~~~T-s 263 (304)
T 4fk1_A 211 ---------------YLKKVEFH------SGLRIERAGGFIVPTFFRPNQFIE-----QLGCELQSNGTFVIDDFGRT-S 263 (304)
T ss_dssp ---------------CCCEEEET------TSCEECCCEEEECCEEECSSCHHH-----HTTCCCCTTSSSCSSTTCBC-S
T ss_pred ---------------eeeeeecc------ccceeeecceeeeeccccCChhhh-----hcCeEECCCCCEEECcCCcc-C
Confidence 11123332 788999999999888887766654 34788999999999999999 8
Q ss_pred CCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCC
Q 010331 382 HPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 426 (513)
Q Consensus 382 ~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~ 426 (513)
.|+|||+|||+..+ ++++..|+.||+.+|.+|.+.|.+
T Consensus 264 ~p~IyA~GDv~~~~-------~~~~~~A~~~G~~AA~~i~~~L~~ 301 (304)
T 4fk1_A 264 EKNIYLAGETTTQG-------PSSLIIAASQGNKAAIAINSDITD 301 (304)
T ss_dssp STTEEECSHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeccCCCc-------chHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999752 578889999999999999887753
No 59
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.97 E-value=7.5e-30 Score=258.35 Aligned_cols=295 Identities=16% Similarity=0.168 Sum_probs=199.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC-----Cc--hhhhhh-ccccCCcchHhHHHHhcCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-----PM--LYELLS-GEVDAWEIAPRFADLLANT 150 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~-----p~--~~~~~~-g~~~~~~~~~~~~~~~~~~ 150 (513)
.++|||||||+||+++|..|++ .+++|+|||+++.+... |. ++.... ......++...+.+.+++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 87 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM------NNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERY 87 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTT
T ss_pred CCCEEEECCCHHHHHHHHHHHh------CCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 4799999999999999999998 45699999998754211 10 000000 0112234555666777778
Q ss_pred CeEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCC---CCCCCCCCC-ccccC-----CCCCC
Q 010331 151 GVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGA---EPKLDVVPG-AAEFA-----FPFST 220 (513)
Q Consensus 151 ~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs---~~~~~~ipG-~~~~~-----~~~~~ 220 (513)
+++++.+ +|+.++.+.+. .+.|.++++.++.||+||+|||+ .+..+++|| ..+.. +.+++
T Consensus 88 ~~~~~~~~~v~~i~~~~~~----------~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~ 157 (360)
T 3ab1_A 88 NPDVVLNETVTKYTKLDDG----------TFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKS 157 (360)
T ss_dssp CCEEECSCCEEEEEECTTS----------CEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSC
T ss_pred CCEEEcCCEEEEEEECCCc----------eEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCC
Confidence 8988765 89999865420 12577778888999999999999 566677787 54321 11222
Q ss_pred HHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeE
Q 010331 221 LEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRC 288 (513)
Q Consensus 221 ~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~ 288 (513)
.++. . .++..+ ..|...+ .|+++++...+.+. +...+.+.+.+++.||++++++.+.+
T Consensus 158 ~~~~---~-----~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~--~~~~~~l~~~~~~~gv~i~~~~~v~~ 227 (360)
T 3ab1_A 158 VEDF---K-----GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH--GKTAHEVERARANGTIDVYLETEVAS 227 (360)
T ss_dssp GGGG---T-----TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC--SHHHHSSHHHHHHTSEEEESSEEEEE
T ss_pred HHHc---C-----CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC--HHHHHHHHHHhhcCceEEEcCcCHHH
Confidence 2211 0 011111 2333333 49999988776543 34556667788899999999999999
Q ss_pred EeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCC
Q 010331 289 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNAR 368 (513)
Q Consensus 289 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~ 368 (513)
+..+++.. ..+.++.. ++ +.+++++|.||+|+|++|+++++.. .+++++ +
T Consensus 228 i~~~~~~v--------------------~~v~~~~~---~g-~~~~i~~D~vi~a~G~~p~~~~l~~-----~~~~~~-~ 277 (360)
T 3ab1_A 228 IEESNGVL--------------------TRVHLRSS---DG-SKWTVEADRLLILIGFKSNLGPLAR-----WDLELY-E 277 (360)
T ss_dssp EEEETTEE--------------------EEEEEEET---TC-CEEEEECSEEEECCCBCCSCGGGGG-----SSCCEE-T
T ss_pred hccCCCce--------------------EEEEEEec---CC-CeEEEeCCEEEECCCCCCCHHHHHh-----hccccc-c
Confidence 98743100 13334311 11 2368999999999999999877764 356666 7
Q ss_pred CCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCCCCCcccC
Q 010331 369 GQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQ 435 (513)
Q Consensus 369 G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~~~~f~~~ 435 (513)
|+|.||+++|+ +.|+|||+|||+..++ .++++..|..||.++|.||.+.+.+.+..++.|.
T Consensus 278 g~i~vd~~~~t-~~~~vya~GD~~~~~~-----~~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~~~ 338 (360)
T 3ab1_A 278 NALVVDSHMKT-SVDGLYAAGDIAYYPG-----KLKIIQTGLSEATMAVRHSLSYIKPGEKIRNVFS 338 (360)
T ss_dssp TEEECCTTSBC-SSTTEEECSTTEECTT-----CCCSHHHHHHHHHHHHHHHHHHHSCC--------
T ss_pred CeeeecCCCcC-CCCCEEEecCccCCCC-----ccceeehhHHHHHHHHHHHHhhcCCccccCceec
Confidence 99999999998 8999999999998632 2689999999999999999999988766555443
No 60
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.97 E-value=2.8e-30 Score=256.93 Aligned_cols=290 Identities=13% Similarity=0.078 Sum_probs=196.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc---ccCCchhhhh--hccccCCcchHhHHHHhcCCCeE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF---VFKPMLYELL--SGEVDAWEIAPRFADLLANTGVQ 153 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~---~~~p~~~~~~--~g~~~~~~~~~~~~~~~~~~~v~ 153 (513)
+++|||||||+||+++|..|++. +++|+|||+...- .+........ .......++...+.+.+.+.+++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARA------NLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETE 78 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT------TCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCE
Confidence 47999999999999999999984 5599999975311 1111000000 00112234555666677778999
Q ss_pred EEEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccccC-CCCCCHHHHHHHHHHHH
Q 010331 154 FFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFA-FPFSTLEDACRVDRKLS 232 (513)
Q Consensus 154 ~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~l~ 232 (513)
++.++|+.++.+.+. ..+ +.++.++.||+||+|||+.+..+.+||..++. ..+..... ....+.
T Consensus 79 ~~~~~v~~i~~~~~~-----------~~v-~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~ 143 (320)
T 1trb_A 79 IIFDHINKVDLQNRP-----------FRL-NGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACAT---SDGFFY 143 (320)
T ss_dssp EECCCEEEEECSSSS-----------EEE-EESSCEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHH---HHGGGG
T ss_pred EEEeeeeEEEecCCE-----------EEE-EeCCCEEEcCEEEECCCCCcCCCCCCChHHhCCceeEeccc---CCcccc
Confidence 999999999876542 133 45667899999999999999888888864321 11111111 111111
Q ss_pred HHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEecccccccccc
Q 010331 233 ELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVK 300 (513)
Q Consensus 233 ~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~ 300 (513)
..++..+ ..|...+ .|+++++.+.+. ..+.+.+.+.+.+++.||++++++.+.++..+++..
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v---- 217 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR--AEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGV---- 217 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC--CCHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSE----
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc--cCHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCce----
Confidence 1111111 3344433 599999877653 356667777888899999999999999998643100
Q ss_pred CCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCc---
Q 010331 301 QPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETL--- 377 (513)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l--- 377 (513)
.++.++ .....+++++++||.||+|+|++|+++++.. +++++ +|+|.||+++
T Consensus 218 ----------------~~v~~~--~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~~------~l~~~-~G~i~vd~~~~~~ 272 (320)
T 1trb_A 218 ----------------TGVRLR--DTQNSDNIESLDVAGLFVAIGHSPNTAIFEG------QLELE-NGYIKVQSGIHGN 272 (320)
T ss_dssp ----------------EEEEEE--CCTTCCCCEEEECSEEEECSCEEESCGGGTT------TSCEE-TTEECCCCSSSSC
T ss_pred ----------------EEEEEE--eccCCCceEEEEcCEEEEEeCCCCChHHhcc------ccccc-CceEEECCCcccc
Confidence 123332 1111013468999999999999999887762 46677 8999999987
Q ss_pred --cccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCC
Q 010331 378 --CVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 428 (513)
Q Consensus 378 --~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~ 428 (513)
++ +.|+|||+|||+..+ ++++..|+.||+.+|.||...+.++.
T Consensus 273 ~~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~~ 317 (320)
T 1trb_A 273 ATQT-SIPGVFAAGDVMDHI-------YRQAITSAGTGCMAALDAERYLDGLA 317 (320)
T ss_dssp TTBC-SSTTEEECGGGGCSS-------SCCHHHHHHHHHHHHHHHHHHHTC--
T ss_pred cccC-CCCCEEEcccccCCc-------chhhhhhhccHHHHHHHHHHHHHhcc
Confidence 55 899999999999862 57899999999999999999998753
No 61
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.97 E-value=1.7e-30 Score=271.57 Aligned_cols=277 Identities=22% Similarity=0.248 Sum_probs=198.7
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC-------C---chh------hhh---hc------cc
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY------ELL---SG------EV 134 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~-------p---~~~------~~~---~g------~~ 134 (513)
+||||||||+||+++|.+|++. +.+|+|||+++.+... | ++. ... .| ..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~------g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~ 75 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL------GMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVEL 75 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEE
T ss_pred CCEEEECCChhHHHHHHHHHHC------CCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCcc
Confidence 6899999999999999999984 4599999998643211 0 000 000 00 00
Q ss_pred cCCcc-----------hHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCC
Q 010331 135 DAWEI-----------APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEP 203 (513)
Q Consensus 135 ~~~~~-----------~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~ 203 (513)
+...+ ...+.+++++.+++++.+++..+++... .|.+ +|.++.||+||+|||++|
T Consensus 76 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~-------------~v~~-~g~~~~~d~lviAtG~~p 141 (455)
T 2yqu_A 76 DLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKV-------------LVEE-TGEELEARYILIATGSAP 141 (455)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEE-------------EETT-TCCEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeE-------------EEee-CCEEEEecEEEECCCCCC
Confidence 11111 1122445556789999987766543211 3444 567899999999999999
Q ss_pred CCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHH
Q 010331 204 KLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALK 271 (513)
Q Consensus 204 ~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~ 271 (513)
..|++||.... .+.+.+++..+... .++..+ ..+...+ .|+++++.+.+++..++.+.+.+.+
T Consensus 142 ~~~~~~g~~~~--~v~~~~~~~~~~~~---~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~ 216 (455)
T 2yqu_A 142 LIPPWAQVDYE--RVVTSTEALSFPEV---PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAER 216 (455)
T ss_dssp CCCTTBCCCSS--SEECHHHHTCCSSC---CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHH
T ss_pred CCCCCCCCCcC--cEechHHhhccccC---CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccccCHHHHHHHHH
Confidence 88888886431 23344444322110 011111 3344444 5999999999999899999999999
Q ss_pred HHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCC
Q 010331 272 VLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 351 (513)
Q Consensus 272 ~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~ 351 (513)
.+++.||++++++++.+++.++ +.+.+++. +++++++|.||+|+|.+|+++
T Consensus 217 ~l~~~Gv~i~~~~~V~~i~~~~-----------------------~~v~v~~~------~g~~i~~D~vv~A~G~~p~~~ 267 (455)
T 2yqu_A 217 VFKKQGLTIRTGVRVTAVVPEA-----------------------KGARVELE------GGEVLEADRVLVAVGRRPYTE 267 (455)
T ss_dssp HHHHHTCEEECSCCEEEEEEET-----------------------TEEEEEET------TSCEEEESEEEECSCEEECCT
T ss_pred HHHHCCCEEEECCEEEEEEEeC-----------------------CEEEEEEC------CCeEEEcCEEEECcCCCcCCC
Confidence 9999999999999999998644 34555543 567899999999999999987
Q ss_pred CCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010331 352 HVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 352 ~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
++... ..+++++++|+|.||+++++ +.|+|||+|||+.. ++++..|.+||+++|.||.+
T Consensus 268 ~l~~~---~~g~~~~~~g~i~vd~~~~t-~~~~iya~GD~~~~--------~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 268 GLSLE---NAGLSTDERGRIPVDEHLRT-RVPHIYAIGDVVRG--------PMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp TCCGG---GGTCCCCTTSCCCCCTTSBC-SSTTEEECGGGSSS--------CCCHHHHHHHHHHHHHHHHH
T ss_pred CCChh---hcCCccCCCCcEeECCCccc-CCCCEEEEecCCCC--------ccCHHHHHHhHHHHHHHHcC
Confidence 74211 34677888899999999998 89999999999986 67899999999999999986
No 62
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.6e-30 Score=260.80 Aligned_cols=287 Identities=13% Similarity=0.091 Sum_probs=194.0
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc---ccCCc---hhhhhhccccCCcchHhHHHHhcCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF---VFKPM---LYELLSGEVDAWEIAPRFADLLANTG 151 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~---~~~p~---~~~~~~g~~~~~~~~~~~~~~~~~~~ 151 (513)
+.++|+|||||+||+++|..|++. +++|+|||+...- .+... ++.+. ......++...+.+.+.+.+
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~gg~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~ 85 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA------QLAPLVFEGTSFGGALMTTTDVENYPGFR-NGITGPELMDEMREQALRFG 85 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT------TCCCEEECCSSCSCGGGSCSCBCCSTTCT-TCBCHHHHHHHHHHHHHHTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEecCCCCCceeccchhhhcCCCC-CCCCHHHHHHHHHHHHHHcC
Confidence 457999999999999999999984 5599999975311 11110 01010 01122345556667777789
Q ss_pred eEEEEEeEEEEeCCCCcCcCCCceeeccceE-ecCCceEEEecEEEEeCCCCCCCCCCCCccccC-CCCCCHHHHHHHHH
Q 010331 152 VQFFKDRVKLLCPSDHLGVNGPMACTHGGTV-LLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFA-FPFSTLEDACRVDR 229 (513)
Q Consensus 152 v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v-~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~l~~ 229 (513)
++++.++|+.++..+. +.| .++++.++.||+||+|||+.+..|.+||..++. ..+..... ...
T Consensus 86 v~~~~~~v~~i~~~~~------------~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~---~~~ 150 (335)
T 2a87_A 86 ADLRMEDVESVSLHGP------------LKSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCAT---CDG 150 (335)
T ss_dssp CEEECCCEEEEECSSS------------SEEEEETTSCEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHH---HHG
T ss_pred CEEEEeeEEEEEeCCc------------EEEEEeCCCCEEEeCEEEECCCCCccCCCCCchHhccCCceEEeec---cch
Confidence 9999888999987222 246 677788899999999999999888899864421 11111111 111
Q ss_pred HHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccc
Q 010331 230 KLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEA 297 (513)
Q Consensus 230 ~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~ 297 (513)
.+...++..+ ..+...+ .|+++++.+.+... .. ...+.+++.||++++++.+.++..++..
T Consensus 151 ~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~--~~---~~~~~~~~~gV~v~~~~~v~~i~~~~~~-- 223 (335)
T 2a87_A 151 FFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRAS--KI---MLDRARNNDKIRFLTNHTVVAVDGDTTV-- 223 (335)
T ss_dssp GGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSSC--TT---HHHHHHHCTTEEEECSEEEEEEECSSSC--
T ss_pred hhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCcc--HH---HHHHHhccCCcEEEeCceeEEEecCCcE--
Confidence 1111111111 3333433 59999987766431 11 1234567799999999999999874311
Q ss_pred cccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCc
Q 010331 298 SVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETL 377 (513)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l 377 (513)
..+.++.. .++ +++++++|.||+|+|++|+++++.. +++++++|+|.||+++
T Consensus 224 -------------------~~v~~~~~--~~g-~~~~i~~D~vi~a~G~~p~~~~~~~------~l~~~~~G~i~vd~~~ 275 (335)
T 2a87_A 224 -------------------TGLRVRDT--NTG-AETTLPVTGVFVAIGHEPRSGLVRE------AIDVDPDGYVLVQGRT 275 (335)
T ss_dssp -------------------CEEEEEEE--TTS-CCEEECCSCEEECSCEEECCTTTBT------TBCBCTTSCBCCSTTS
T ss_pred -------------------eEEEEEEc--CCC-ceEEeecCEEEEccCCccChhHhhc------ccccCCCccEEeCCCC
Confidence 23444311 111 3468999999999999999887752 4678889999999865
Q ss_pred cccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCC
Q 010331 378 CVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 428 (513)
Q Consensus 378 ~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~ 428 (513)
+.++.|+|||+|||+..+ ++++..|+.||+.+|.||.+.+.+++
T Consensus 276 ~~t~~~~iya~GD~~~~~-------~~~~~~A~~~g~~aA~~i~~~l~~~~ 319 (335)
T 2a87_A 276 TSTSLPGVFAAGDLVDRT-------YRQAVTAAGSGCAAAIDAERWLAEHA 319 (335)
T ss_dssp SBCSSTTEEECGGGTCCS-------CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeeecCCcc-------HHHHHHHHHhHHHHHHHHHHHhhcCc
Confidence 334899999999999852 57899999999999999999886543
No 63
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.97 E-value=1.6e-29 Score=266.07 Aligned_cols=279 Identities=16% Similarity=0.182 Sum_probs=198.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC----Cchhh---------------hhhcccc----
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK----PMLYE---------------LLSGEVD---- 135 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~----p~~~~---------------~~~g~~~---- 135 (513)
.+||+|||||+||++||..|++. +++|+|||+.. .... ...+. .....+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~------G~~V~liEk~~-~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~ 98 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL------GKRVAIAEEYR-IGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADP 98 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhC------cCEEEEEeCCC-CCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 47999999999999999999995 45999999943 1110 00000 0000000
Q ss_pred ---C-----------CcchHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecC-CceEEEecEEEEeCC
Q 010331 136 ---A-----------WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLE-SGLIVEYDWLVLSLG 200 (513)
Q Consensus 136 ---~-----------~~~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~-~g~~i~yD~LVlAtG 200 (513)
. ..+...+...++..+++++.+++..++.. .+.+. ++.++.||+||+|||
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~---------------~v~v~~~~~~~~~d~lviAtG 163 (484)
T 3o0h_A 99 IFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEH---------------TLELSVTGERISAEKILIATG 163 (484)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETT---------------EEEETTTCCEEEEEEEEECCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCC---------------EEEEecCCeEEEeCEEEEccC
Confidence 0 01222344556677999999988888643 35554 667899999999999
Q ss_pred CCCC-CCCCCCccccCCCCCCHHHHHHHHHHH-------HHHHhhhHHHHHhcC-cEEEEeccCeecCCCChhHHHHHHH
Q 010331 201 AEPK-LDVVPGAAEFAFPFSTLEDACRVDRKL-------SELERRNFERLEEKG-IVQAINVETTICPTGTPGNREAALK 271 (513)
Q Consensus 201 s~~~-~~~ipG~~~~~~~~~~~~~a~~l~~~l-------~~~~~~~v~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~ 271 (513)
+.+. .|.+||.. ..+............+.+ ...+ ....+...+ .|+++++.+.+++.+++.+.+.+.+
T Consensus 164 ~~p~~~p~i~G~~-~~~~~~~~~~~~~~~~~v~ViGgG~~g~e--~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~ 240 (484)
T 3o0h_A 164 AKIVSNSAIKGSD-LCLTSNEIFDLEKLPKSIVIVGGGYIGVE--FANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLND 240 (484)
T ss_dssp EEECCC--CBTGG-GSBCTTTGGGCSSCCSEEEEECCSHHHHH--HHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHH
T ss_pred CCcccCCCCCCcc-ccccHHHHHhHHhcCCcEEEECcCHHHHH--HHHHHHHcCCeEEEEECCCccccccCHHHHHHHHH
Confidence 9998 88999964 222222211100000000 0000 002333333 5999999999999999999999999
Q ss_pred HHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCC
Q 010331 272 VLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 351 (513)
Q Consensus 272 ~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~ 351 (513)
.+++.||++++++.|.+++.++ +.+.+.+. +|+++++|.||+|+|.+|++.
T Consensus 241 ~l~~~Gv~i~~~~~V~~i~~~~-----------------------~~v~v~~~------~g~~i~aD~Vi~A~G~~p~~~ 291 (484)
T 3o0h_A 241 AMVAKGISIIYEATVSQVQSTE-----------------------NCYNVVLT------NGQTICADRVMLATGRVPNTT 291 (484)
T ss_dssp HHHHHTCEEESSCCEEEEEECS-----------------------SSEEEEET------TSCEEEESEEEECCCEEECCT
T ss_pred HHHHCCCEEEeCCEEEEEEeeC-----------------------CEEEEEEC------CCcEEEcCEEEEeeCCCcCCC
Confidence 9999999999999999998754 34555543 677899999999999999987
Q ss_pred CCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010331 352 HVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAA 423 (513)
Q Consensus 352 ~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~ 423 (513)
++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. ++++..|..||+++|+||...
T Consensus 292 ~l~l~---~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 292 GLGLE---RAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTGH--------IQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp TCCHH---HHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGTS--------CCCHHHHHHHHHHHHHHHHC-
T ss_pred CCChh---hcCceECCCCCEeECCCCCC-CCCCEEEEEecCCC--------CcCHHHHHHHHHHHHHHHcCC
Confidence 75321 34788899999999999997 89999999999985 789999999999999999864
No 64
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.97 E-value=1.6e-30 Score=272.32 Aligned_cols=278 Identities=22% Similarity=0.257 Sum_probs=197.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc---cCCchhh-----------h----hh-cc-----c
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV---FKPMLYE-----------L----LS-GE-----V 134 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~---~~p~~~~-----------~----~~-g~-----~ 134 (513)
++||||||||+||++||..|++. +.+|+|||+++.-. .....+. . .. |. .
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~------g~~V~lie~~~~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~ 79 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL------GLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPEL 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCCCCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCc
Confidence 47999999999999999999984 45999999987210 0000000 0 00 00 0
Q ss_pred cCCcch-----------HhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCC
Q 010331 135 DAWEIA-----------PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEP 203 (513)
Q Consensus 135 ~~~~~~-----------~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~ 203 (513)
+...+. ..+..++++.+++++.+++..++. + +|.+. |++++||+||||||++|
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~-------------~v~v~-g~~~~~d~lViATGs~p 143 (464)
T 2eq6_A 80 DLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGP--K-------------EVEVG-GERYGAKSLILATGSEP 143 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--T-------------EEEET-TEEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccC--C-------------EEEEc-cEEEEeCEEEEcCCCCC
Confidence 111111 112345666799999988776653 2 35555 56899999999999998
Q ss_pred CCCC-CCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHH
Q 010331 204 KLDV-VPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAAL 270 (513)
Q Consensus 204 ~~~~-ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~ 270 (513)
..|+ +|| .+ .+.+.+++..+.+.+. ++..+ ..+...+ .|+++++.+.+++..++.+.+.+.
T Consensus 144 ~~p~gi~~-~~---~v~~~~~~~~l~~~~~--~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~ 217 (464)
T 2eq6_A 144 LELKGFPF-GE---DVWDSTRALKVEEGLP--KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLR 217 (464)
T ss_dssp CCBTTBCC-SS---SEECHHHHTCGGGCCC--SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHH
T ss_pred CCCCCCCC-CC---cEEcHHHHHhhhhhcC--CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHH
Confidence 8764 666 22 2335556544432110 11111 3444444 599999999999999999999999
Q ss_pred HHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcce--EEeeceEEEecCCCC
Q 010331 271 KVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQ--IFEADLVLWTVGSKP 348 (513)
Q Consensus 271 ~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~--~i~aD~vi~a~G~~p 348 (513)
+.+++.||++++++.+.+++.++ +.+.+++.. + .+|+ ++++|.||+|+|.+|
T Consensus 218 ~~l~~~gV~i~~~~~v~~i~~~~-----------------------~~~~v~~~~--~-~~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 218 RALEKEGIRVRTKTKAVGYEKKK-----------------------DGLHVRLEP--A-EGGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp HHHHHTTCEEECSEEEEEEEEET-----------------------TEEEEEEEE--T-TCCSCEEEEESEEEECSCEEE
T ss_pred HHHHhcCCEEEcCCEEEEEEEeC-----------------------CEEEEEEee--c-CCCceeEEEcCEEEECCCccc
Confidence 99999999999999999998643 334444421 1 0144 899999999999999
Q ss_pred CCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010331 349 LLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 349 ~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
+++++.. +..+++++++|+|.||+++|+ +.|+|||+|||+.. ++++..|.+||+++|.||.+
T Consensus 272 ~~~~l~l---~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 272 RTEGLGL---EKAGVKVDERGFIRVNARMET-SVPGVYAIGDAARP--------PLLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp SCTTSSH---HHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTCS--------SCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCh---hhcCceecCCCCEEECCCccc-CCCCEEEEeccCCC--------cccHHHHHHHHHHHHHHhcC
Confidence 9876521 134677888999999999998 89999999999986 67899999999999999975
No 65
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.97 E-value=4.8e-30 Score=269.68 Aligned_cols=282 Identities=17% Similarity=0.210 Sum_probs=197.2
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCc----------hh------------hh----hh
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM----------LY------------EL----LS 131 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~----------~~------------~~----~~ 131 (513)
+++||+|||||+||++||..|++.+ ++|+|||+++....... .+ .. ..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G------~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~ 75 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLG------LKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKL 75 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHT------CCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCC------CEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3589999999999999999999954 49999999862110000 00 00 00
Q ss_pred ccccC-------C-----------cchHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCc--eEEE
Q 010331 132 GEVDA-------W-----------EIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVE 191 (513)
Q Consensus 132 g~~~~-------~-----------~~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g--~~i~ 191 (513)
..+.. . .+...+..++++.+++++.+++..+++... .|.+.+| .++.
T Consensus 76 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~-------------~v~~~~g~~~~~~ 142 (476)
T 3lad_A 76 HGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKV-------------EVTAADGSSQVLD 142 (476)
T ss_dssp GTEECSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCE-------------EEECTTSCEEEEC
T ss_pred cCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEE-------------EEEcCCCceEEEE
Confidence 00000 0 011122344556689999998887765432 4666666 5799
Q ss_pred ecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecC
Q 010331 192 YDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICP 259 (513)
Q Consensus 192 yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~ 259 (513)
||+||||||++|..++.++... ..+.+.+++..+... .++..+ ..+...+ .|+++++.+.+++
T Consensus 143 ~d~lvlAtG~~p~~~~~~~~~~--~~v~~~~~~~~~~~~---~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 217 (476)
T 3lad_A 143 TENVILASGSKPVEIPPAPVDQ--DVIVDSTGALDFQNV---PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP 217 (476)
T ss_dssp CSCEEECCCEEECCCTTSCCCS--SSEEEHHHHTSCSSC---CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred cCEEEEcCCCCCCCCCCCCCCc--ccEEechhhhccccC---CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc
Confidence 9999999999987655444321 112222222211100 001111 3344444 5999999999999
Q ss_pred CCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcc-eEEeec
Q 010331 260 TGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLES-QIFEAD 338 (513)
Q Consensus 260 ~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g-~~i~aD 338 (513)
.+++.+.+.+.+.+++.||++++++.+.+++.++ +.+.+.+. .+ ++ +++++|
T Consensus 218 ~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~-----------------------~~~~v~~~---~~-~g~~~~~~D 270 (476)
T 3lad_A 218 AVDEQVAKEAQKILTKQGLKILLGARVTGTEVKN-----------------------KQVTVKFV---DA-EGEKSQAFD 270 (476)
T ss_dssp TSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECS-----------------------SCEEEEEE---SS-SEEEEEEES
T ss_pred ccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcC-----------------------CEEEEEEE---eC-CCcEEEECC
Confidence 9999999999999999999999999999998754 34444443 11 23 689999
Q ss_pred eEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHH
Q 010331 339 LVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGW 418 (513)
Q Consensus 339 ~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ 418 (513)
.||+|+|.+|+++++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. |.++..|..||+++|+
T Consensus 271 ~vi~a~G~~p~~~~l~~~---~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~g~~aa~ 338 (476)
T 3lad_A 271 KLIVAVGRRPVTTDLLAA---DSGVTLDERGFIYVDDYCAT-SVPGVYAIGDVVRG--------AMLAHKASEEGVVVAE 338 (476)
T ss_dssp EEEECSCEEECCTTCCSS---CCSCCBCTTSCBCCCTTSBC-SSTTEEECGGGSSS--------CCCHHHHHHHHHHHHH
T ss_pred EEEEeeCCcccCCCCCcc---ccCccccCCCCEeeCCCccc-CCCCEEEEEccCCC--------cccHHHHHHHHHHHHH
Confidence 999999999998764222 34788899999999999998 89999999999965 7799999999999999
Q ss_pred HHHH
Q 010331 419 NLWA 422 (513)
Q Consensus 419 ni~~ 422 (513)
||.+
T Consensus 339 ~i~g 342 (476)
T 3lad_A 339 RIAG 342 (476)
T ss_dssp HHHH
T ss_pred HhcC
Confidence 9986
No 66
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.97 E-value=2.8e-30 Score=258.44 Aligned_cols=293 Identities=16% Similarity=0.159 Sum_probs=193.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeC----CCCccc----CCchhhhh--hccccCCcchHhHHHHhc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQ----SERFVF----KPMLYELL--SGEVDAWEIAPRFADLLA 148 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~----~~~~~~----~p~~~~~~--~g~~~~~~~~~~~~~~~~ 148 (513)
.++|+|||||++|+++|..|++. +++|+|||+ ...... ........ .......++...+.+.++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~------g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 81 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARA------ELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSE 81 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC------CCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHH
Confidence 46999999999999999999984 559999998 221110 00000000 001122345556667777
Q ss_pred CCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccccC--CCCCCHHHHHH
Q 010331 149 NTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFA--FPFSTLEDACR 226 (513)
Q Consensus 149 ~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~--~~~~~~~~a~~ 226 (513)
+.+++++.++|+.++.+.+. ..|.+ ++.+++||+||+|+|+.+..+++||..+.. +....+.....
T Consensus 82 ~~gv~~~~~~v~~i~~~~~~-----------~~v~~-~~~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 149 (333)
T 1vdc_A 82 RFGTTIFTETVTKVDFSSKP-----------FKLFT-DSKAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAV 149 (333)
T ss_dssp HTTCEEECCCCCEEECSSSS-----------EEEEC-SSEEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHH
T ss_pred HCCCEEEEeEEEEEEEcCCE-----------EEEEE-CCcEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEecc
Confidence 78999998889899765431 24666 667899999999999999888899875421 11111111111
Q ss_pred HHHHH--HHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHH-HHHHHhCCcEEEcCceeeEEec
Q 010331 227 VDRKL--SELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAA-LKVLSARKVQLVLGYFVRCIRR 291 (513)
Q Consensus 227 l~~~l--~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~-~~~l~~~gV~v~~~~~v~~i~~ 291 (513)
....+ ...++..+ ..|...+ .|+++++.+.+.. . +.+ .+.+++.||++++++.+.++..
T Consensus 150 ~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~--~----~~~~~~~~~~~gv~i~~~~~v~~i~~ 223 (333)
T 1vdc_A 150 CDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA--S----KIMQQRALSNPKIDVIWNSSVVEAYG 223 (333)
T ss_dssp HHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS--C----HHHHHHHHTCTTEEEECSEEEEEEEE
T ss_pred CccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc--c----HHHHHHHHhCCCeeEecCCceEEEeC
Confidence 11111 01111111 3344433 5999998776532 1 233 3556789999999999999987
Q ss_pred cccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCe
Q 010331 292 VGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQA 371 (513)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i 371 (513)
+++.. .+ ..+.++ ...++ +.++++||.||+|+|++|+++++.. +++++++|+|
T Consensus 224 ~~~~~------~v------------~~v~~~--~~~~g-~~~~i~~D~vi~a~G~~p~~~~~~~------~l~~~~~G~i 276 (333)
T 1vdc_A 224 DGERD------VL------------GGLKVK--NVVTG-DVSDLKVSGLFFAIGHEPATKFLDG------GVELDSDGYV 276 (333)
T ss_dssp SSSSS------SE------------EEEEEE--ETTTC-CEEEEECSEEEECSCEEESCGGGTT------SSCBCTTSCB
T ss_pred CCCcc------ce------------eeEEEE--ecCCC-ceEEEecCEEEEEeCCccchHHhhc------cccccCCCCE
Confidence 43100 00 123332 11111 3468999999999999999887752 4677889999
Q ss_pred EeCCCc-cccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCCCC
Q 010331 372 ETDETL-CVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLL 430 (513)
Q Consensus 372 ~Vd~~l-~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~~~ 430 (513)
.||+++ ++ +.|+|||+|||+..+ ++++..|+.||+.+|.||.+.+.+++..
T Consensus 277 ~vd~~~~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~~~~ 328 (333)
T 1vdc_A 277 VTKPGTTQT-SVPGVFAAGDVQDKK-------YRQAITAAGTGCMAALDAEHYLQEIGSQ 328 (333)
T ss_dssp CCCTTSCBC-SSTTEEECGGGGCSS-------CCCHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred Eechhhccc-CCCCEEEeeeccCCC-------chhHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 999875 55 899999999999862 5789999999999999999999876643
No 67
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.97 E-value=3e-30 Score=271.97 Aligned_cols=285 Identities=17% Similarity=0.238 Sum_probs=197.1
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC--------cccC-------C---chh---------hhh
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER--------FVFK-------P---MLY---------ELL 130 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~--------~~~~-------p---~~~---------~~~ 130 (513)
+.+||+|||||+||++||..|++. +.+|+|||+++. +... | ++. ...
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~------G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~ 78 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQL------GKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAH 78 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHH
Confidence 458999999999999999999985 459999997321 1000 0 000 000
Q ss_pred -hc-------cccCCcc-----------hHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCc--eE
Q 010331 131 -SG-------EVDAWEI-----------APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LI 189 (513)
Q Consensus 131 -~g-------~~~~~~~-----------~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g--~~ 189 (513)
.| ..+...+ ...+...++..+++++.+++..+++... .|.+++| .+
T Consensus 79 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v-------------~v~~~~g~~~~ 145 (488)
T 3dgz_A 79 HYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTV-------------RGVDKGGKATL 145 (488)
T ss_dssp HTTCCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEE-------------EEECTTSCEEE
T ss_pred hcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeE-------------EEEeCCCceEE
Confidence 00 0000011 1112334556799999998887765432 4566666 57
Q ss_pred EEecEEEEeCCCCCCCCC-CCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCe
Q 010331 190 VEYDWLVLSLGAEPKLDV-VPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETT 256 (513)
Q Consensus 190 i~yD~LVlAtGs~~~~~~-ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ 256 (513)
+.||+||||||++|..|+ +||..++.+ +.+++..+.... ++..+ ..+...+ .|+++++. .
T Consensus 146 ~~~d~lViATGs~p~~p~~i~G~~~~~~---~~~~~~~~~~~~---~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~ 218 (488)
T 3dgz_A 146 LSAEHIVIATGGRPRYPTQVKGALEYGI---TSDDIFWLKESP---GKTLVVGASYVALECAGFLTGIGLDTTVMMRS-I 218 (488)
T ss_dssp EEEEEEEECCCEEECCCSSCBTHHHHCB---CHHHHTTCSSCC---CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-C
T ss_pred EECCEEEEcCCCCCCCCCCCCCcccccC---cHHHHHhhhhcC---CeEEEECCCHHHHHHHHHHHHcCCceEEEEcC-c
Confidence 999999999999999998 999755433 333332221100 01111 3344444 59999885 5
Q ss_pred ecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEe
Q 010331 257 ICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFE 336 (513)
Q Consensus 257 ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~ 336 (513)
+++.+++.+.+.+.+.|+++||++++++.+.++...++ +.+.+.+....++ +..+++
T Consensus 219 ~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~----------------------~~~~v~~~~~~~g-~~~~~~ 275 (488)
T 3dgz_A 219 PLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT----------------------NQLQVTWEDHASG-KEDTGT 275 (488)
T ss_dssp SSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTT----------------------SCEEEEEEETTTT-EEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC----------------------CcEEEEEEeCCCC-eeEEEE
Confidence 78888999999999999999999999999999976331 3344444311111 223689
Q ss_pred eceEEEecCCCCCCCCCCCCCCccCCCccC-CCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHH
Q 010331 337 ADLVLWTVGSKPLLPHVEPPNNRLHDLPLN-ARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADF 415 (513)
Q Consensus 337 aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~-~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~ 415 (513)
+|.||+|+|++|+++++... ..+++++ ++|+|.||+++|+ +.|+|||+|||+.. .|+++..|..||++
T Consensus 276 ~D~vi~a~G~~p~~~~l~l~---~~g~~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~-------~~~~~~~A~~~g~~ 344 (488)
T 3dgz_A 276 FDTVLWAIGRVPETRTLNLE---KAGISTNPKNQKIIVDAQEAT-SVPHIYAIGDVAEG-------RPELTPTAIKAGKL 344 (488)
T ss_dssp ESEEEECSCEEESCGGGTGG---GGTCCBCSSSCCBCCCTTSBC-SSTTEEECGGGBTT-------CCCCHHHHHHHHHH
T ss_pred CCEEEEcccCCcccCcCCcc---ccCcEecCCCCeEeECCCCcc-CCCCEEEeEEecCC-------CCcchhHHHHHHHH
Confidence 99999999999998875322 3478888 7999999999998 89999999999852 17789999999999
Q ss_pred HHHHHHH
Q 010331 416 AGWNLWA 422 (513)
Q Consensus 416 ~a~ni~~ 422 (513)
+|.||.+
T Consensus 345 aa~~i~g 351 (488)
T 3dgz_A 345 LAQRLFG 351 (488)
T ss_dssp HHHHHHS
T ss_pred HHHHHcC
Confidence 9999985
No 68
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.97 E-value=6.5e-30 Score=269.10 Aligned_cols=284 Identities=18% Similarity=0.223 Sum_probs=197.2
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC-------cccCCc------hh---------------hh
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER-------FVFKPM------LY---------------EL 129 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~-------~~~~p~------~~---------------~~ 129 (513)
..+||+|||||+||++||.+|++. +.+|+|||+... ..+... .| ..
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~------G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~ 81 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLN------GARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEA 81 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHH
Confidence 458999999999999999999995 459999994211 000000 00 00
Q ss_pred h-hcc-------ccCCcch-----------HhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCc-eE
Q 010331 130 L-SGE-------VDAWEIA-----------PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG-LI 189 (513)
Q Consensus 130 ~-~g~-------~~~~~~~-----------~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g-~~ 189 (513)
. .|. .+...+. ..+...++..+++++.+.+..+++... .|.+++| .+
T Consensus 82 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v-------------~v~~~~g~~~ 148 (483)
T 3dgh_A 82 AAYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTL-------------LAKLKSGERT 148 (483)
T ss_dssp HHTTBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEE-------------EEECTTCCEE
T ss_pred HhcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEE-------------EEEeCCCeEE
Confidence 0 000 0000111 112233556789999988887765432 4666666 47
Q ss_pred EEecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCee
Q 010331 190 VEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTI 257 (513)
Q Consensus 190 i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~l 257 (513)
+.||+||||||++|..|++||..++.+ +.+++..+... -++..+ ..+...+ .|+++++ ..+
T Consensus 149 ~~~d~lviATGs~p~~p~i~G~~~~~~---~~~~~~~~~~~---~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~-~~~ 221 (483)
T 3dgh_A 149 ITAQTFVIAVGGRPRYPDIPGAVEYGI---TSDDLFSLDRE---PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR-SIV 221 (483)
T ss_dssp EEEEEEEECCCEEECCCSSTTHHHHCB---CHHHHTTCSSC---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES-SCS
T ss_pred EEcCEEEEeCCCCcCCCCCCCcccccC---cHHHHhhhhhc---CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeC-CCC
Confidence 999999999999999999999765432 33333222110 001111 3344444 5999987 568
Q ss_pred cCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEee
Q 010331 258 CPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEA 337 (513)
Q Consensus 258 l~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~a 337 (513)
++.+++.+.+.+.+.|+++||++++++.+.++...++ +.+.+.+.....+ +..++++
T Consensus 222 l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~----------------------~~~~v~~~~~~~~-~~~~~~~ 278 (483)
T 3dgh_A 222 LRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDD----------------------GKLLVKYKNVETG-EESEDVY 278 (483)
T ss_dssp STTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTT----------------------SCEEEEEEETTTC-CEEEEEE
T ss_pred CcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC----------------------CcEEEEEecCCCC-ceeEEEc
Confidence 8889999999999999999999999999999986431 2344544321111 3458999
Q ss_pred ceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHH
Q 010331 338 DLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAG 417 (513)
Q Consensus 338 D~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a 417 (513)
|.||+|+|.+|+++++... ..++++++ |+|.||+++|+ +.|+|||+|||+.. .|+++..|..||+++|
T Consensus 279 D~vi~a~G~~p~~~~l~l~---~~gl~~~~-G~i~vd~~~~t-~~~~IyA~GD~~~~-------~~~~~~~A~~~g~~aa 346 (483)
T 3dgh_A 279 DTVLWAIGRKGLVDDLNLP---NAGVTVQK-DKIPVDSQEAT-NVANIYAVGDIIYG-------KPELTPVAVLAGRLLA 346 (483)
T ss_dssp SEEEECSCEEECCGGGTGG---GTTCCCBT-TBBCCCTTCBC-SSTTEEECSTTBTT-------SCCCHHHHHHHHHHHH
T ss_pred CEEEECcccccCcCcCCch---hcCccccC-CEEEECcCCcc-CCCCEEEEEcccCC-------CCccHHHHHHHHHHHH
Confidence 9999999999998876421 34788888 99999999998 89999999999852 1788999999999999
Q ss_pred HHHHH
Q 010331 418 WNLWA 422 (513)
Q Consensus 418 ~ni~~ 422 (513)
.||.+
T Consensus 347 ~~i~g 351 (483)
T 3dgh_A 347 RRLYG 351 (483)
T ss_dssp HHHHS
T ss_pred HHHcC
Confidence 99975
No 69
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.97 E-value=9.8e-30 Score=252.35 Aligned_cols=282 Identities=16% Similarity=0.134 Sum_probs=182.7
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc---ccCCchhhhhhc-cccCCcchHhHHHHhcCCCeE
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF---VFKPMLYELLSG-EVDAWEIAPRFADLLANTGVQ 153 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~---~~~p~~~~~~~g-~~~~~~~~~~~~~~~~~~~v~ 153 (513)
+.+|||||||||||++||.+|+++ +++|+|||+...- ......+.+..- .....++.........+.+..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~------g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 78 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA------NLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAV 78 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhcccc
Confidence 458999999999999999999995 4599999986421 111111111100 111123444444555556666
Q ss_pred EEEE-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCccccCC-C--CCCHHHHHHHHH
Q 010331 154 FFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-P--FSTLEDACRVDR 229 (513)
Q Consensus 154 ~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~~-~--~~~~~~a~~l~~ 229 (513)
+... .+...+.... .+...++.++.||+||||||++|+.|++||..+... . .....+...+.
T Consensus 79 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~- 144 (312)
T 4gcm_A 79 YQYGDIKSVEDKGEY-------------KVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFK- 144 (312)
T ss_dssp EEECCCCEEEECSSC-------------EEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGT-
T ss_pred ccceeeeeeeeeecc-------------eeeccCCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCccccC-
Confidence 6655 3333333322 345567779999999999999999999999754211 1 11111111100
Q ss_pred HHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccc
Q 010331 230 KLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEA 297 (513)
Q Consensus 230 ~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~ 297 (513)
-++..+ ..+...+ .||++++.+++++.. ....+.+++.++.......+..+...+...
T Consensus 145 ----~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 214 (312)
T 4gcm_A 145 ----NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQR-----ILQDRAFKNDKIDFIWSHTLKSINEKDGKV- 214 (312)
T ss_dssp ----TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCH-----HHHHHHHHCTTEEEECSEEEEEEEEETTEE-
T ss_pred ----CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcch-----hHHHHHHHhcCcceeeecceeeeecccccc-
Confidence 011111 3444444 599999988876532 223456777888888887776665533110
Q ss_pred cccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCc
Q 010331 298 SVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETL 377 (513)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l 377 (513)
....... . ...++..+++|.|++++|..|++.++... ++ .+++|+|.||+++
T Consensus 215 -------------------~~~~~~~--~-~~~~~~~~~~d~v~~~~g~~~~~~~~~~~-----g~-~~~~G~I~vd~~~ 266 (312)
T 4gcm_A 215 -------------------GSVTLTS--T-KDGSEETHEADGVFIYIGMKPLTAPFKDL-----GI-TNDVGYIVTKDDM 266 (312)
T ss_dssp -------------------EEEEEEE--T-TTCCEEEEECSEEEECSCEEESCGGGGGG-----TC-BCTTSCBCCCTTS
T ss_pred -------------------ccceeee--e-cCCceeEEeeeeEEeecCCCcCchhHHhc-----ce-ecCCCeEeeCCCC
Confidence 1111111 1 12367789999999999999998776543 33 4678999999999
Q ss_pred cccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHC
Q 010331 378 CVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 425 (513)
Q Consensus 378 ~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~ 425 (513)
|| +.|+|||+|||+..+ ++++..|+.||+.+|.||...++
T Consensus 267 ~T-s~pgIyA~GDv~~~~-------~~~~~~A~~~G~~AA~~i~~~L~ 306 (312)
T 4gcm_A 267 TT-SVPGIFAAGDVRDKG-------LRQIVTATGDGSIAAQSAAEYIE 306 (312)
T ss_dssp BC-SSTTEEECSTTBSCS-------CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-CCCCEEEEeecCCCc-------chHHHHHHHHHHHHHHHHHHHHH
Confidence 99 899999999998741 57899999999999999988764
No 70
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.96 E-value=3.5e-29 Score=261.60 Aligned_cols=272 Identities=22% Similarity=0.262 Sum_probs=191.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC-------C---chh-----hhh--------hcc--
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY-----ELL--------SGE-- 133 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~-------p---~~~-----~~~--------~g~-- 133 (513)
++||||||||+||++||.+|++.+ .+|+|||++. +... | ++. ..+ .|.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g------~~V~lie~~~-~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~ 77 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLG------IPTVLVEGQA-LGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISV 77 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHT------CCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC------CEEEEEccCC-CCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCccc
Confidence 479999999999999999999854 4999999954 2100 0 000 000 110
Q ss_pred ----ccCCcch-----------HhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEe
Q 010331 134 ----VDAWEIA-----------PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLS 198 (513)
Q Consensus 134 ----~~~~~~~-----------~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlA 198 (513)
.+..++. ..+.+++++.+++++.+++..++. + +|.+++ .+++||+||||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~--~-------------~v~v~~-~~~~~d~lviA 141 (458)
T 1lvl_A 78 ASPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDG--K-------------QVEVDG-QRIQCEHLLLA 141 (458)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEET--T-------------EEEETT-EEEECSEEEEC
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccC--C-------------EEEEee-EEEEeCEEEEe
Confidence 0001111 112355667899999987766642 2 466655 68999999999
Q ss_pred CCCCCCCCC-CCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhH
Q 010331 199 LGAEPKLDV-VPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGN 265 (513)
Q Consensus 199 tGs~~~~~~-ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~ 265 (513)
||++|+.|+ +|. .. .+.+.+++..+... .++..+ ..+...+ .|+++++.+.+++.+++.+
T Consensus 142 TGs~p~~~~~~~~-~~---~v~~~~~~~~~~~~---~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~ 214 (458)
T 1lvl_A 142 TGSSSVELPMLPL-GG---PVISSTEALAPKAL---PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTYDSEL 214 (458)
T ss_dssp CCEEECCBTTBCC-BT---TEECHHHHTCCSSC---CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHH
T ss_pred CCCCCCCCCCCCc-cC---cEecHHHHhhhhcc---CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHH
Confidence 999987654 552 22 23445554332210 011111 3344434 5999999999999889999
Q ss_pred HHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecC
Q 010331 266 REAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVG 345 (513)
Q Consensus 266 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G 345 (513)
.+.+.+.+++.||++++++.+.+++. + + +.++.. ++ +.+++++|.||+|+|
T Consensus 215 ~~~l~~~l~~~gv~i~~~~~v~~i~~-~-----------------------~-v~v~~~---~G-~~~~i~~D~vv~a~G 265 (458)
T 1lvl_A 215 TAPVAESLKKLGIALHLGHSVEGYEN-G-----------------------C-LLANDG---KG-GQLRLEADRVLVAVG 265 (458)
T ss_dssp HHHHHHHHHHHTCEEETTCEEEEEET-T-----------------------E-EEEECS---SS-CCCEECCSCEEECCC
T ss_pred HHHHHHHHHHCCCEEEECCEEEEEEe-C-----------------------C-EEEEEC---CC-ceEEEECCEEEECcC
Confidence 99999999999999999999999976 3 3 334311 11 226899999999999
Q ss_pred CCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 010331 346 SKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 422 (513)
Q Consensus 346 ~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~ 422 (513)
.+|+++++.. ...+++++++ +|.||+++|+ +.|+|||+|||+.. ++++..|.+||+++|.||.+
T Consensus 266 ~~p~~~~l~~---~~~g~~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 266 RRPRTKGFNL---ECLDLKMNGA-AIAIDERCQT-SMHNVWAIGDVAGE--------PMLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp EEECCSSSSG---GGSCCCEETT-EECCCTTCBC-SSTTEEECGGGGCS--------SCCHHHHHHHHHHHHHHHTT
T ss_pred CCcCCCCCCc---HhcCCcccCC-EEeECCCCcC-CCCCEEEeeccCCC--------cccHHHHHHHHHHHHHHhcC
Confidence 9999876521 1346777777 8999999997 89999999999986 67899999999999999975
No 71
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.96 E-value=5.5e-29 Score=262.33 Aligned_cols=277 Identities=15% Similarity=0.114 Sum_probs=192.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC----------c------------hhhh--hhc--
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP----------M------------LYEL--LSG-- 132 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p----------~------------~~~~--~~g-- 132 (513)
.+||+|||||+||++||..|++. +++|+|||+++. .... + .+.+ ..+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~------G~~V~liE~~~~-GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~ 80 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH------TDKVVLIEGGAY-GTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRI 80 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT------CSCEEEEESSCS-SCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhC------CCcEEEEeCCCC-CCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCC
Confidence 37999999999999999999984 559999999761 1000 0 0000 000
Q ss_pred cccCCcchHhHHH-----------HhcC-CCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCC
Q 010331 133 EVDAWEIAPRFAD-----------LLAN-TGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG 200 (513)
Q Consensus 133 ~~~~~~~~~~~~~-----------~~~~-~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtG 200 (513)
..+..++...+.+ .+.. .+++++.++..-++. ++|.++++.++.||+||||||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~---------------~~v~~~~~~~~~~d~lViATG 145 (492)
T 3ic9_A 81 SVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDE---------------HTLQVDDHSQVIAKRIVIATG 145 (492)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEET---------------TEEEETTTEEEEEEEEEECCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecC---------------CEEEEcCCcEEEeCEEEEccC
Confidence 0111111111111 1111 244566665554432 257777788999999999999
Q ss_pred CCCCCCCCCCc-cccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHH
Q 010331 201 AEPKLDVVPGA-AEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNRE 267 (513)
Q Consensus 201 s~~~~~~ipG~-~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~ 267 (513)
++|..|+++|. .++ +.+.+++..+... .++..+ ..+...+ .|+++++.+.+++.+++.+.+
T Consensus 146 s~p~~p~~~~~~~~~---v~t~~~~~~~~~~---~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~ 219 (492)
T 3ic9_A 146 SRPNYPEFLAAAGSR---LLTNDNLFELNDL---PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKR 219 (492)
T ss_dssp EECCCCHHHHTTGGG---EECHHHHTTCSSC---CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHH
T ss_pred CCCcCCCCCCccCCc---EEcHHHHhhhhhc---CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHH
Confidence 99987775543 222 2233333222110 011111 3344444 599999999999999999999
Q ss_pred HHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcc--eEEeeceEEEecC
Q 010331 268 AALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLES--QIFEADLVLWTVG 345 (513)
Q Consensus 268 ~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g--~~i~aD~vi~a~G 345 (513)
.+.+.|++. |++++++.+.++..++ +++.+++.. .+| +++++|.||+|+|
T Consensus 220 ~l~~~l~~~-V~i~~~~~v~~i~~~~-----------------------~~v~v~~~~----~~G~~~~i~~D~Vi~a~G 271 (492)
T 3ic9_A 220 YAEKTFNEE-FYFDAKARVISTIEKE-----------------------DAVEVIYFD----KSGQKTTESFQYVLAATG 271 (492)
T ss_dssp HHHHHHHTT-SEEETTCEEEEEEECS-----------------------SSEEEEEEC----TTCCEEEEEESEEEECSC
T ss_pred HHHHHHhhC-cEEEECCEEEEEEEcC-----------------------CEEEEEEEe----CCCceEEEECCEEEEeeC
Confidence 999999988 9999999999998754 445555421 134 7899999999999
Q ss_pred CCCCCCCCCCCCCccCCCccCCCCCeEeC-CCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010331 346 SKPLLPHVEPPNNRLHDLPLNARGQAETD-ETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAA 423 (513)
Q Consensus 346 ~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd-~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~ 423 (513)
.+|+++++... ..+++++++|+|.|| +++|+ +.|+|||+|||+.. +++++.|..||+++|.||...
T Consensus 272 ~~p~~~~l~l~---~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~~~g~~aa~~i~~~ 338 (492)
T 3ic9_A 272 RKANVDKLGLE---NTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANNT--------LTLLHEAADDGKVAGTNAGAY 338 (492)
T ss_dssp CEESCSSSCGG---GSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGTS--------SCSHHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCChh---hcCCEECCCCCEeECcccccC-CCCCEEEEEecCCC--------CccHHHHHHHHHHHHHHHcCC
Confidence 99998875322 457889999999999 89999 89999999999986 788999999999999999873
No 72
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.96 E-value=1.7e-28 Score=260.09 Aligned_cols=285 Identities=15% Similarity=0.148 Sum_probs=196.0
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC--cccCCchhhhhhc-cccCCcchHhHHHHhcCCCeEE
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER--FVFKPMLYELLSG-EVDAWEIAPRFADLLANTGVQF 154 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~--~~~~p~~~~~~~g-~~~~~~~~~~~~~~~~~~~v~~ 154 (513)
..++|||||||+||+++|.+|++. +++|+|||++.. .........+... .....++...+.+.++++++++
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~------G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v 284 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARK------GIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDV 284 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEE
T ss_pred CcccEEEECCcHHHHHHHHHHHhC------CCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 357999999999999999999984 559999987431 1111111111110 1122345566777788889999
Q ss_pred EEE-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCcccc----CCCCCCHHHHHHHHH
Q 010331 155 FKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEF----AFPFSTLEDACRVDR 229 (513)
Q Consensus 155 ~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~----~~~~~~~~~a~~l~~ 229 (513)
+.+ +|+.++++... . ..+.|.+++|.++.||+||+|||+.++.+++||..++ .+.+...+.
T Consensus 285 ~~~~~v~~i~~~~~~-~-------~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~------ 350 (521)
T 1hyu_A 285 IDSQSASKLVPAATE-G-------GLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDG------ 350 (521)
T ss_dssp ECSCCEEEEECCSST-T-------SCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCG------
T ss_pred EcCCEEEEEEeccCC-C-------ceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCch------
Confidence 988 99999764220 0 0125777888889999999999999988889997542 111111100
Q ss_pred HHHHHHhhhH-----------HHHHhc-CcEEEEeccCeecCCCChhHHHHHHHHHHh-CCcEEEcCceeeEEecccccc
Q 010331 230 KLSELERRNF-----------ERLEEK-GIVQAINVETTICPTGTPGNREAALKVLSA-RKVQLVLGYFVRCIRRVGEFE 296 (513)
Q Consensus 230 ~l~~~~~~~v-----------~~l~~~-~~vtli~~~~~ll~~~~~~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~~~ 296 (513)
.....++..+ ..|... ..|+++++.+.+... +.+.+.|.+ .||++++++.++++..++
T Consensus 351 ~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~~------~~l~~~l~~~~gV~v~~~~~v~~i~~~~--- 421 (521)
T 1hyu_A 351 PLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD------QVLQDKVRSLKNVDIILNAQTTEVKGDG--- 421 (521)
T ss_dssp GGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCSC------HHHHHHHTTCTTEEEECSEEEEEEEECS---
T ss_pred hhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCcC------HHHHHHHhcCCCcEEEeCCEEEEEEcCC---
Confidence 0000011111 233333 359999988776532 345666777 699999999999998643
Q ss_pred ccccCCCcccccccccccCCCce-EEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCC
Q 010331 297 ASVKQPESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDE 375 (513)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~v-~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~ 375 (513)
+.+ .+.+.+..++ +..++++|.||+++|.+||++++.. .++++++|+|.||+
T Consensus 422 --------------------~~v~~v~~~~~~~g-~~~~i~~D~vi~a~G~~pn~~~l~~------~l~~~~~G~I~Vd~ 474 (521)
T 1hyu_A 422 --------------------SKVVGLEYRDRVSG-DIHSVALAGIFVQIGLLPNTHWLEG------ALERNRMGEIIIDA 474 (521)
T ss_dssp --------------------SSEEEEEEEETTTC-CEEEEECSEEEECCCEEESCGGGTT------TSCBCTTSCBCCCT
T ss_pred --------------------CcEEEEEEEeCCCC-ceEEEEcCEEEECcCCCCCchHHhh------hhccCCCCcEEeCC
Confidence 222 2333211111 3357999999999999999988864 36678899999999
Q ss_pred CccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCC
Q 010331 376 TLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 426 (513)
Q Consensus 376 ~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~ 426 (513)
++++ +.|+|||+|||+..+ ++++..|+.||..+|.||...+.+
T Consensus 475 ~~~t-s~p~VfA~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~L~~ 517 (521)
T 1hyu_A 475 KCET-SVKGVFAAGDCTTVP-------YKQIIIATGEGAKASLSAFDYLIR 517 (521)
T ss_dssp TCBC-SSTTEEECSTTBCCS-------SCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC-CCCCEEEeecccCCC-------cceeeehHHhHHHHHHHHHHHHHh
Confidence 9998 899999999999862 478999999999999999988754
No 73
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.95 E-value=4.5e-28 Score=261.67 Aligned_cols=287 Identities=17% Similarity=0.234 Sum_probs=192.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCC-CCc---cc-CC-------chhhh-----------h---
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQS-ERF---VF-KP-------MLYEL-----------L--- 130 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~-~~~---~~-~p-------~~~~~-----------~--- 130 (513)
...+||+||||||||++||.+|++. +++|+|||+. +.. .+ .. ..+.. .
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~------g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~ 178 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY------GAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDA 178 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccEEEECCCccHHHHHHHHHhC------CCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhH
Confidence 3458999999999999999999995 4599999973 210 00 00 00000 0
Q ss_pred --hcc-ccC-------CcchHh-----------HHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCc--
Q 010331 131 --SGE-VDA-------WEIAPR-----------FADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG-- 187 (513)
Q Consensus 131 --~g~-~~~-------~~~~~~-----------~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g-- 187 (513)
.|. ... .++... +...++..+++++.+.+..++.... .+.+.+|
T Consensus 179 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v-------------~v~~~~g~~ 245 (598)
T 2x8g_A 179 EHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEV-------------QITDKNQKV 245 (598)
T ss_dssp HHTTCCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEE-------------EEECTTCCE
T ss_pred HhCCccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEE-------------EEEeCCCCe
Confidence 010 000 011111 1223445689999888877765432 3445556
Q ss_pred eEEEecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccC
Q 010331 188 LIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVET 255 (513)
Q Consensus 188 ~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~ 255 (513)
.+++||+||||||++|+.|++||..++.. +.+++..+... .++.++ ..+...+ .|+++++.
T Consensus 246 ~~~~~d~lviAtGs~p~~p~i~G~~~~~~---~~~~~~~~~~~---~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~- 318 (598)
T 2x8g_A 246 STITGNKIILATGERPKYPEIPGAVEYGI---TSDDLFSLPYF---PGKTLVIGASYVALECAGFLASLGGDVTVMVRS- 318 (598)
T ss_dssp EEEEEEEEEECCCEEECCCSSTTHHHHCE---EHHHHTTCSSC---CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-
T ss_pred EEEEeCEEEEeCCCCCCCCCCCCcccceE---cHHHHhhCccC---CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-
Confidence 47999999999999999999999755322 22222111100 011111 3444444 59999987
Q ss_pred eecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEecc-----ccccccccCCCcccccccccccCCCceEEEecccccCC
Q 010331 256 TICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRV-----GEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGL 330 (513)
Q Consensus 256 ~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~ 330 (513)
.+++.+++.+.+.+.+.|++.||++++++.+.++... ... ..+.+.+++.. .
T Consensus 319 ~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~-------------------~~~~~~v~~~~----~ 375 (598)
T 2x8g_A 319 ILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENN-------------------KPGLLLVKGHY----T 375 (598)
T ss_dssp CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTT-------------------BCCEEEEEEEE----T
T ss_pred cCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccC-------------------CCceEEEEEEe----C
Confidence 7788888999999999999999999999988887542 100 00233333210 1
Q ss_pred cceE--EeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHH
Q 010331 331 ESQI--FEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQV 408 (513)
Q Consensus 331 ~g~~--i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~ 408 (513)
+|++ +++|.||+|+|++||++++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. .++++..
T Consensus 376 ~g~~~~~~~D~vi~a~G~~p~~~~l~~~---~~gl~~~~~G~i~vd~~~~t-s~~~VyA~GD~~~~-------~~~~~~~ 444 (598)
T 2x8g_A 376 DGKKFEEEFETVIFAVGREPQLSKVLCE---TVGVKLDKNGRVVCTDDEQT-TVSNVYAIGDINAG-------KPQLTPV 444 (598)
T ss_dssp TSCEEEEEESEEEECSCEEECGGGTBCG---GGCCCBCTTSCBCCCTTSBC-SSTTEEECGGGBTT-------SCCCHHH
T ss_pred CCcEEeccCCEEEEEeCCccccCccCch---hcCceECCCCcEEeCCCCcC-CCCCEEEEeeecCC-------CCccHHH
Confidence 3444 4599999999999998775321 34788888999999999998 89999999999653 1678999
Q ss_pred HHHHHHHHHHHHHHH
Q 010331 409 AFQQADFAGWNLWAA 423 (513)
Q Consensus 409 A~~qg~~~a~ni~~~ 423 (513)
|.+||+++|.||.+.
T Consensus 445 A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 445 AIQAGRYLARRLFAG 459 (598)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHhHHHHHHHHhcC
Confidence 999999999999863
No 74
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=4e-28 Score=244.49 Aligned_cols=274 Identities=19% Similarity=0.153 Sum_probs=176.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc------------cCCchhhhhhccc---------cCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV------------FKPMLYELLSGEV---------DAW 137 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~------------~~p~~~~~~~g~~---------~~~ 137 (513)
+++|||||||++|+++|..|++. +++|+|||+++... +.+.......+.. ...
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~------g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS------GLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARA 76 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS------SCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHH
Confidence 36899999999999999999984 55999999987431 1111000011100 002
Q ss_pred cchHhHHHHhcCCCeEEEEE-eEEEEeCCCCcCcCCCceeeccce-EecCCceEEEecEEEEeCCC--CCCCCCCCCccc
Q 010331 138 EIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGT-VLLESGLIVEYDWLVLSLGA--EPKLDVVPGAAE 213 (513)
Q Consensus 138 ~~~~~~~~~~~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~-v~~~~g~~i~yD~LVlAtGs--~~~~~~ipG~~~ 213 (513)
++...+.+++++.+++++.+ +|+.++.+++. +. |.++++ +++||+||+|||. .+..|.+||..+
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-----------~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~ 144 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHFGER-----------LRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLES 144 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEETTE-----------EEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEECCCc-----------EEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccc
Confidence 44555666777789998875 89999876541 24 777777 8999999999995 666788998754
Q ss_pred cC------CCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcCcEEEEecc-CeecCCC--ChhHHHHHHHHH
Q 010331 214 FA------FPFSTLEDACRVDRKLSELERRNF-----------ERLEEKGIVQAINVE-TTICPTG--TPGNREAALKVL 273 (513)
Q Consensus 214 ~~------~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~~vtli~~~-~~ll~~~--~~~~~~~~~~~l 273 (513)
.. ..+..... +. .++..+ ..|...+.++++.+. ..+++.. ...+.+.+.+.+
T Consensus 145 ~~~~~~~~~~~~~~~~---~~-----~~~v~VvG~G~~g~e~a~~l~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (357)
T 4a9w_A 145 FAGIQLHSAHYSTPAP---FA-----GMRVAIIGGGNSGAQILAEVSTVAETTWITQHEPAFLADDVDGRVLFERATERW 216 (357)
T ss_dssp CCSEEEEGGGCCCSGG---GT-----TSEEEEECCSHHHHHHHHHHTTTSEEEEECSSCCCBCCTTCCTHHHHTC-----
T ss_pred cCCcEEEeccCCChhh---cC-----CCEEEEECCCcCHHHHHHHHHhhCCEEEEECCCCeecchhhcCccHHHHHHHHH
Confidence 21 11111111 00 011111 445555679999876 4555543 223333333322
Q ss_pred Hh----------------------------CCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecc
Q 010331 274 SA----------------------------RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQP 325 (513)
Q Consensus 274 ~~----------------------------~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~ 325 (513)
.+ .|+ +..+..+.+++. +.+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~-------------------------~~v~~---- 266 (357)
T 4a9w_A 217 KAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSP-------------------------TGMQW---- 266 (357)
T ss_dssp -----------------CBCCCHHHHHHHHTTC-CCEECCCSEEET-------------------------TEEEC----
T ss_pred hccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeC-------------------------CeeEE----
Confidence 21 222 222223333322 22322
Q ss_pred cccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCC--ccccCCCCEEEEcc--cccccCCCCCC
Q 010331 326 AIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDET--LCVKGHPRIFALGD--SSALRDSSGRP 401 (513)
Q Consensus 326 ~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~--l~~~~~p~VfaiGD--~a~~~~~~g~~ 401 (513)
.+++++++|+||||+|++|+++++... ++. +++|+|.||++ +++ +.|+|||+|| |+. +
T Consensus 267 ----~~g~~i~~D~vi~a~G~~p~~~~l~~~-----gl~-~~~G~i~vd~~~l~~t-~~~~vya~Gd~d~~~-------~ 328 (357)
T 4a9w_A 267 ----ADGTERAFDAVIWCTGFRPALSHLKGL-----DLV-TPQGQVEVDGSGLRAL-AVPSVWLLGYGDWNG-------M 328 (357)
T ss_dssp ----TTSCEEECSEEEECCCBCCCCGGGTTT-----TCB-CTTSCBCBCTTSCBBS-SCTTEEECSSCGGGS-------T
T ss_pred ----CCCCEecCCEEEECCCcCCCCcccCcc-----ccc-CCCCCccccCCcccCC-CCCCeEEeccccccc-------c
Confidence 277899999999999999999988753 566 88899999998 565 9999999995 544 2
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHCC
Q 010331 402 LPATAQVAFQQADFAGWNLWAAIND 426 (513)
Q Consensus 402 ~~~~a~~A~~qg~~~a~ni~~~l~~ 426 (513)
.++++..|.+||+.+|+||.+.+++
T Consensus 329 ~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 329 ASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp TCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred chhhhhhhHHHHHHHHHHHHHHHHh
Confidence 2678888999999999999999987
No 75
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.95 E-value=7.7e-28 Score=254.37 Aligned_cols=282 Identities=20% Similarity=0.253 Sum_probs=194.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC--------ccc----------CCchhh-----hh-----
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER--------FVF----------KPMLYE-----LL----- 130 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~--------~~~----------~p~~~~-----~~----- 130 (513)
.+||||||||+||+.||.+++++| .+|+|||+... +.. +.+++. ..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G------~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~ 115 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHG------ARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSK 115 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTT------CCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC------CeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhH
Confidence 379999999999999999999965 49999997431 100 001100 00
Q ss_pred -hcc------ccCCc-----------chHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeeccceEec----CCce
Q 010331 131 -SGE------VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLL----ESGL 188 (513)
Q Consensus 131 -~g~------~~~~~-----------~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~----~~g~ 188 (513)
.|. .+... +...+...+++.+|+++.+...-+++..- .|.. .+++
T Consensus 116 ~~Gi~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v-------------~V~~~~~~~~~~ 182 (542)
T 4b1b_A 116 AYGWKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTV-------------SYYLKGDLSKEE 182 (542)
T ss_dssp GGTEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEE-------------EEEEC--CCCEE
T ss_pred hcCcccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcc-------------eEeecccCCceE
Confidence 010 00001 11223344567799999998877765432 1222 2346
Q ss_pred EEEecEEEEeCCCCCCCCCCC-CccccCCCCCCHHHHHHHHHHHHHH---HhhhH-----HHHHhcC-cEEEEeccCeec
Q 010331 189 IVEYDWLVLSLGAEPKLDVVP-GAAEFAFPFSTLEDACRVDRKLSEL---ERRNF-----ERLEEKG-IVQAINVETTIC 258 (513)
Q Consensus 189 ~i~yD~LVlAtGs~~~~~~ip-G~~~~~~~~~~~~~a~~l~~~l~~~---~~~~v-----~~l~~~~-~vtli~~~~~ll 258 (513)
++.+|++|||||++|..|+.+ +..+.. .+.+++..+.+..+.+ ....+ ..+...+ .||++.+ +.+|
T Consensus 183 ~i~a~~iiIATGs~P~~P~~~~~~~~~~---~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~-~~~L 258 (542)
T 4b1b_A 183 TVTGKYILIATGCRPHIPDDVEGAKELS---ITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVL 258 (542)
T ss_dssp EEEEEEEEECCCEEECCCSSSBTHHHHC---BCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEES-SCSS
T ss_pred EEeeeeEEeccCCCCCCCCcccCCCccc---cCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecc-cccc
Confidence 899999999999999877543 333332 2444443332211000 00000 3333334 4999876 5789
Q ss_pred CCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeec
Q 010331 259 PTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEAD 338 (513)
Q Consensus 259 ~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD 338 (513)
+.+++++.+.+.+.|++.||+++++..+.++...+ +.+.+.+. ++.++++|
T Consensus 259 ~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~-----------------------~~~~v~~~------~~~~~~~D 309 (542)
T 4b1b_A 259 RGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD-----------------------DKILVEFS------DKTSELYD 309 (542)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET-----------------------TEEEEEET------TSCEEEES
T ss_pred cccchhHHHHHHHHHHhhcceeecceEEEEEEecC-----------------------CeEEEEEc------CCCeEEEE
Confidence 99999999999999999999999999999988765 45556553 66788999
Q ss_pred eEEEecCCCCCCCCCCCCCCccCCCccCCCCCe-EeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHH
Q 010331 339 LVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQA-ETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAG 417 (513)
Q Consensus 339 ~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i-~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a 417 (513)
.|++|+|.+||++.+... ..++.++.+|.+ .||+++|+ +.|+|||+|||+.. .|.+++.|..||++++
T Consensus 310 ~vLvAvGR~Pnt~~L~le---~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiGDv~~~-------~p~La~~A~~eg~~aa 378 (542)
T 4b1b_A 310 TVLYAIGRKGDIDGLNLE---SLNMNVNKSNNKIIADHLSCT-NIPSIFAVGDVAEN-------VPELAPVAIKAGEILA 378 (542)
T ss_dssp EEEECSCEEESCGGGCGG---GTTCCEETTTTEECCCTTSBC-SSTTEEECTTSBTT-------CCCCHHHHHHHHHHHH
T ss_pred EEEEcccccCCccccCcc---cceeeecccCceEeccccccc-cCCCeEEeccccCC-------chhHHHHHHHHHHHHH
Confidence 999999999999887654 347777776665 78889998 89999999999863 2789999999999999
Q ss_pred HHHHHH
Q 010331 418 WNLWAA 423 (513)
Q Consensus 418 ~ni~~~ 423 (513)
.||...
T Consensus 379 ~~i~g~ 384 (542)
T 4b1b_A 379 RRLFKD 384 (542)
T ss_dssp HHHHSC
T ss_pred HHHhcC
Confidence 999863
No 76
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.95 E-value=5.1e-28 Score=251.63 Aligned_cols=296 Identities=15% Similarity=0.084 Sum_probs=186.8
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEE
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (513)
...++|+|||||+||+++|..|++.+ ++|+|||+.+.+.. .+...+++...++++.....+++++.+++|+.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G------~~V~v~e~~~~~GG--~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~ 191 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKG------YEVHVYDRYDRMGG--LLVYGIPGFKLEKSVVERRVKLLADAGVIYHP 191 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHT------CCEEEECSSSSCST--HHHHTSCTTTSCHHHHHHHHHHHHHTTCEEET
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC------CeEEEEeccCCCCC--eeeecCCCccCCHHHHHHHHHHHHHCCcEEEe
Confidence 34679999999999999999999954 49999999875421 11111112122334556667778888999887
Q ss_pred EeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCC-CCCCCCCCccccCCCCCCHHHHHHHHHHH--HH
Q 010331 157 DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAE-PKLDVVPGAAEFAFPFSTLEDACRVDRKL--SE 233 (513)
Q Consensus 157 ~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~-~~~~~ipG~~~~~~~~~~~~~a~~l~~~l--~~ 233 (513)
+.... + .+.++++ .+.||+||||||+. ++.+++||.... .+.+..+...-.... ..
T Consensus 192 ~~~v~-----~-------------~v~~~~~-~~~~d~vvlAtG~~~~~~~~ipG~~~~--gv~~a~~~l~~~~~~~~~~ 250 (456)
T 2vdc_G 192 NFEVG-----R-------------DASLPEL-RRKHVAVLVATGVYKARDIKAPGSGLG--NIVAALDYLTTSNKVSLGD 250 (456)
T ss_dssp TCCBT-----T-------------TBCHHHH-HSSCSEEEECCCCCEECCTTCSCCTTT--TEEEHHHHHHHHHHHHCTT
T ss_pred CCEec-----c-------------EEEhhHh-HhhCCEEEEecCCCCCCCCCCCCCcCC--CcEEHHHHHHHhhhhhccc
Confidence 64321 1 1333333 35799999999996 677889986321 122221221111100 00
Q ss_pred -------------HHhhhH-----------HHHHhcC--cEEEEeccCee-cCCCChhHHHHHHHHHHhCCcEEEcCcee
Q 010331 234 -------------LERRNF-----------ERLEEKG--IVQAINVETTI-CPTGTPGNREAALKVLSARKVQLVLGYFV 286 (513)
Q Consensus 234 -------------~~~~~v-----------~~l~~~~--~vtli~~~~~l-l~~~~~~~~~~~~~~l~~~gV~v~~~~~v 286 (513)
.++.++ ..+...+ .|+++.+.+.. ++..+.. .+.+++.||++++++.+
T Consensus 251 ~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e-----~~~~~~~Gv~~~~~~~~ 325 (456)
T 2vdc_G 251 TVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQRE-----VAHAEEEGVEFIWQAAP 325 (456)
T ss_dssp TCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHH-----HHHHHHTTCEEECCSSS
T ss_pred ccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHH-----HHHHHHCCCEEEeCCCc
Confidence 011111 2233333 49999987765 4443322 35677889999999999
Q ss_pred eEEeccccccccccCCCccccccccccc-CCCceEEEecccccCCcceEEeeceEEEecCCCCCCC--CCCCCCCccCCC
Q 010331 287 RCIRRVGEFEASVKQPESGAIPNIAADK-NSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP--HVEPPNNRLHDL 363 (513)
Q Consensus 287 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~--~l~~~~~~~~~~ 363 (513)
.++..++.+. .+.+......+. ..+....... . +++.++++|.||+|+|+.|++. ++.. .++
T Consensus 326 ~~i~~~g~v~------~v~~~~~~~~~~d~~G~~~~~~~---~-g~~~~i~aD~Vi~A~G~~p~~~~~~l~~-----~gl 390 (456)
T 2vdc_G 326 EGFTGDTVVT------GVRAVRIHLGVADATGRQTPQVI---E-GSEFTVQADLVIKALGFEPEDLPNAFDE-----PEL 390 (456)
T ss_dssp CCEEEEEEEE------TTEEEEEEEEEEEECTTCCEEEE---E-EEEEEEECSEEEECSCEECCCHHHHHHS-----TTS
T ss_pred eEEeCCCcEE------EEEEEEEEecccCCcCCcccccc---C-CcEEEEECCEEEECCCCCCCcchhhccc-----CCe
Confidence 9887532110 011000000000 0000000000 1 1346899999999999999864 4543 367
Q ss_pred ccCCCCCeEeCCC-ccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCCCC
Q 010331 364 PLNARGQAETDET-LCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLL 430 (513)
Q Consensus 364 ~~~~~G~i~Vd~~-l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~~~ 430 (513)
+++++|+|.||++ +++ +.|+|||+|||+.. ++++..|+.||+.+|.||.+.+.+++..
T Consensus 391 ~~~~~G~i~vd~~~~~T-s~~~VfA~GD~~~g--------~~~v~~A~~~G~~aA~~i~~~L~~~~~~ 449 (456)
T 2vdc_G 391 KVTRWGTLLVDHRTKMT-NMDGVFAAGDIVRG--------ASLVVWAIRDGRDAAEGIHAYAKAKAEA 449 (456)
T ss_dssp CBCTTSSBCCCTTTCBC-SSTTEEECGGGGSS--------CCSHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eECCCCCEEECCCCCcC-CCCCEEEeccccCC--------chHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 8899999999987 897 89999999999986 7899999999999999999998775433
No 77
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.95 E-value=1.4e-28 Score=269.49 Aligned_cols=326 Identities=15% Similarity=0.094 Sum_probs=219.8
Q ss_pred ccccccccccccc-CCcccccchHHHHHHHHHhhhcccccccccccccccCC-----CCCCCCCCCCeEEEECCCHHHHH
Q 010331 20 GAWSKLFPFSSKS-YLSFKTCRKNRFISFAASNSSGRNGDLVVTSEDESASQ-----TYTWPDKKKPRICILGGGFGGLY 93 (513)
Q Consensus 20 ~~~~~~~~~~~~~-~~~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~VVIVGgG~AGl~ 93 (513)
+.|.+++..++.. ..+|..|.. |...........|..++....... ....+...+++|||||||+||++
T Consensus 331 P~~~~~~~~g~~~~i~~c~~c~~-----C~~~~~~~~~~~C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~ 405 (690)
T 3k30_A 331 PFLPNKIRDGRLNLIRECIGCNI-----CVSGDLTMSPIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLE 405 (690)
T ss_dssp TTHHHHHHTTCGGGCCCCCCCCH-----HHHHHHTTSCCCCSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHH
T ss_pred ccHHHHHHcCCccccccccchhh-----hhhcccCCCcccCCcCcccCcccccccCccccCcccccceEEEECCCHHHHH
Confidence 5577777777766 789999974 665433333445666655544322 11233445689999999999999
Q ss_pred HHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCC-CeEEEEEeEEEEeCCCCcCcCC
Q 010331 94 TALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANT-GVQFFKDRVKLLCPSDHLGVNG 172 (513)
Q Consensus 94 aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~-~v~~~~~~V~~id~~~~~~~~~ 172 (513)
||+.|++.+ ++|+|||+++.+...........+..+..++...+...+.+. +++++.++
T Consensus 406 aA~~La~~G------~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~-------------- 465 (690)
T 3k30_A 406 AARALGVRG------YDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRES-------------- 465 (690)
T ss_dssp HHHHHHHHT------CEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSC--------------
T ss_pred HHHHHHHCC------CeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECC--------------
Confidence 999999954 499999998866554443334445445556666677777776 78776542
Q ss_pred CceeeccceEecCCceEEEecEEEEeCCCCC--------CCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhh------
Q 010331 173 PMACTHGGTVLLESGLIVEYDWLVLSLGAEP--------KLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRN------ 238 (513)
Q Consensus 173 ~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~--------~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~------ 238 (513)
.+..+++.++.||+||+|||+.+ ..+.+||.... .+.+..+.... .....++..
T Consensus 466 --------~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~--~v~~~~~~l~~--~~~~g~~VvViG~gg 533 (690)
T 3k30_A 466 --------PMTGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGM--QVLGPDDLFAG--RLPDGKKVVVYDDDH 533 (690)
T ss_dssp --------CCCHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTS--EEECHHHHHTT--CCCSSSEEEEEECSC
T ss_pred --------eecHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCC--cEEcHHHHhCC--CCCCCCEEEEEcCCC
Confidence 13333445678999999999984 46777876421 12222232111 000000000
Q ss_pred -------HHHHHhcC-cEEEEeccCeecCCCC-hhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccc
Q 010331 239 -------FERLEEKG-IVQAINVETTICPTGT-PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPN 309 (513)
Q Consensus 239 -------v~~l~~~~-~vtli~~~~~ll~~~~-~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~ 309 (513)
...+...+ .|+++++.+.+++... +.....+.+.|++.||++++++.|.+++.++
T Consensus 534 G~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~---------------- 597 (690)
T 3k30_A 534 YYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGG---------------- 597 (690)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETTE----------------
T ss_pred CccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECCe----------------
Confidence 03344444 5999998887766543 5557788899999999999999999998732
Q ss_pred cccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEc
Q 010331 310 IAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALG 389 (513)
Q Consensus 310 ~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiG 389 (513)
+.++.. ..++++++++|.||+|+|++|+++++.. ++..+. ++ +.|+||++|
T Consensus 598 ---------~~v~~~---~~~~~~~i~aD~VV~A~G~~p~~~l~~~---------l~~~~~-------~t-~~~~VyaiG 648 (690)
T 3k30_A 598 ---------VTVRDT---YASIERELECDAVVMVTARLPREELYLD---------LVARRD-------AG-EIASVRGIG 648 (690)
T ss_dssp ---------EEEEET---TTCCEEEEECSEEEEESCEEECCHHHHH---------HHHHHH-------HT-SCSEEEECG
T ss_pred ---------EEEEEc---cCCeEEEEECCEEEECCCCCCChHHHHH---------Hhhhhc-------cc-CCCCEEEEe
Confidence 333321 1126778999999999999999765432 111111 44 789999999
Q ss_pred ccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCCCCCcccCC
Q 010331 390 DSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQN 436 (513)
Q Consensus 390 D~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~~~~f~~~~ 436 (513)
||+. ++.+..|++||+.+|.||.+.+.+++..||++..
T Consensus 649 D~~~---------~~~~~~A~~~g~~aa~~i~~~l~g~~~~p~~~~~ 686 (690)
T 3k30_A 649 DAWA---------PGTIAAAVWSGRRAAEEFDAVLPSNDEVPFRREV 686 (690)
T ss_dssp GGTS---------CBCHHHHHHHHHHHHHHTTCCCCCTTSCSSCCCC
T ss_pred CCCc---------hhhHHHHHHHHHHHHHHHHhhccCCCCCCcChhh
Confidence 9987 4677789999999999999999998888988643
No 78
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.95 E-value=2.2e-27 Score=240.80 Aligned_cols=281 Identities=12% Similarity=0.144 Sum_probs=182.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCCC------Cc-----ccCCchhhhhhcc-------------
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE------RF-----VFKPMLYELLSGE------------- 133 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~~------~~-----~~~p~~~~~~~g~------------- 133 (513)
+++|||||||+||+++|..|++ .++ +|+|||+++ +. .+.+.+.....|.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~------~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 77 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD------FGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPA 77 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHH
T ss_pred cCcEEEECcCHHHHHHHHHHHH------cCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhcccccccc
Confidence 3689999999999999999998 455 899999986 00 0111111000010
Q ss_pred -------ccCCcchHhHHHHhcCCCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCC
Q 010331 134 -------VDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 134 -------~~~~~~~~~~~~~~~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~ 205 (513)
....++...+..++++.+++++.+ +|+.+++++.. +.|.++++ ++.||+||+|||+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~-----------~~v~~~~g-~~~~d~vVlAtG~~~~- 144 (369)
T 3d1c_A 78 FTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAY-----------YTIATTTE-TYHADYIFVATGDYNF- 144 (369)
T ss_dssp HHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-----------EEEEESSC-CEEEEEEEECCCSTTS-
T ss_pred ccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe-----------EEEEeCCC-EEEeCEEEECCCCCCc-
Confidence 011123344556666789998876 79999875421 24666666 6899999999999765
Q ss_pred CCCCCccccCC---CCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-cEEEEeccCeecCC-------CCh
Q 010331 206 DVVPGAAEFAF---PFSTLEDACRVDRKLSELERRNF-----------ERLEEKG-IVQAINVETTICPT-------GTP 263 (513)
Q Consensus 206 ~~ipG~~~~~~---~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~-~vtli~~~~~ll~~-------~~~ 263 (513)
|.+|+ +... .+.+.+. +. .++..+ ..|...+ .|+++++.+.+++. .++
T Consensus 145 p~ip~--~~~~~~~~~~~~~~---~~-----~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~ 214 (369)
T 3d1c_A 145 PKKPF--KYGIHYSEIEDFDN---FN-----KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSP 214 (369)
T ss_dssp BCCCS--SSCEEGGGCSCGGG---SC-----SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCH
T ss_pred cCCCC--CceechhhcCChhh---cC-----CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCH
Confidence 45665 1111 1111110 00 001111 3333333 59999998877642 456
Q ss_pred hHHHHHHHHHHhCC-cEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEe-eceEE
Q 010331 264 GNREAALKVLSARK-VQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFE-ADLVL 341 (513)
Q Consensus 264 ~~~~~~~~~l~~~g-V~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~-aD~vi 341 (513)
...+.+.+.+++.| |++++++.|.+++.++ +.+.+++. +|++++ +|.||
T Consensus 215 ~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~-----------------------~~~~v~~~------~g~~~~~~d~vi 265 (369)
T 3d1c_A 215 YTRQRLGNVIKQGARIEMNVHYTVKDIDFNN-----------------------GQYHISFD------SGQSVHTPHEPI 265 (369)
T ss_dssp HHHHHHHHHHHTTCCEEEECSCCEEEEEEET-----------------------TEEEEEES------SSCCEEESSCCE
T ss_pred HHHHHHHHHHhhCCcEEEecCcEEEEEEecC-----------------------CceEEEec------CCeEeccCCceE
Confidence 67788888899997 9999999999996533 33344443 555565 69999
Q ss_pred EecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHH
Q 010331 342 WTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLW 421 (513)
Q Consensus 342 ~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~ 421 (513)
||+|++|+++++... +++ +++|++.||++++.+++|+|||+|||+..++. .......+.+||+++|+||.
T Consensus 266 ~a~G~~~~~~~~~~~-----~~~-~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~----~~~~~~~~~~~a~~~a~~l~ 335 (369)
T 3d1c_A 266 LATGFDATKNPIVQQ-----LFV-TTNQDIKLTTHDESTRYPNIFMIGATVENDNA----KLCYIYKFRARFAVLAHLLT 335 (369)
T ss_dssp ECCCBCGGGSHHHHH-----HSC-CTTSCCCBCTTSBBSSSTTEEECSTTCCCSSC----CCCSHHHHGGGHHHHHHHHH
T ss_pred EeeccCCccchhhhh-----hcc-CCCCCEEechhhcccCCCCeEEeccccccCCe----eEEEEehhhHHHHHHHHHHh
Confidence 999999997666431 244 77899999987655589999999999987432 12234568899999999999
Q ss_pred HHHCCC
Q 010331 422 AAINDR 427 (513)
Q Consensus 422 ~~l~~~ 427 (513)
+.+...
T Consensus 336 ~~~~~p 341 (369)
T 3d1c_A 336 QREGLP 341 (369)
T ss_dssp HHTTCC
T ss_pred cccCCC
Confidence 987643
No 79
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.93 E-value=3e-27 Score=259.96 Aligned_cols=336 Identities=15% Similarity=0.045 Sum_probs=198.7
Q ss_pred cccccccccccccc-CCcccccchHHHHHHHHH-hhhcccccccccccccccC-----CCCCCCCCCCCeEEEECCCHHH
Q 010331 19 SGAWSKLFPFSSKS-YLSFKTCRKNRFISFAAS-NSSGRNGDLVVTSEDESAS-----QTYTWPDKKKPRICILGGGFGG 91 (513)
Q Consensus 19 ~~~~~~~~~~~~~~-~~~~~~~~rr~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~VVIVGgG~AG 91 (513)
-+.|.+++..++.. .++|..|.. |... ........|..++...... +....+...+++|||||||+||
T Consensus 327 ~P~~~~~~~~g~~~~~~~ci~Cn~-----C~~~~~~~~~~~~C~~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAG 401 (729)
T 1o94_A 327 DPFLPQKVEQGRYDDIRVCIGCNV-----CISRWEIGGPPMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSG 401 (729)
T ss_dssp CTTHHHHHHTTCGGGCCCCCCCCH-----HHHHHHHSSSCCCCSSCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCSHHH
T ss_pred CchHHHHHHcCCccccccccccch-----hcccccccCCceeeccCccccccccccccccccccccCCceEEEECCCHHH
Confidence 34566666666654 788988873 5543 2222333454444433221 1112233456899999999999
Q ss_pred HHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcC
Q 010331 92 LYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVN 171 (513)
Q Consensus 92 l~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~ 171 (513)
++||..|++. +++|+|||+++.............+..+...+...+...++... . ....+..+....
T Consensus 402 l~aA~~L~~~------G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~-~-~~~~~v~i~~~~----- 468 (729)
T 1o94_A 402 SEAARVLMES------GYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLL-K-KNKESQLALGQK----- 468 (729)
T ss_dssp HHHHHHHHHT------TCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHH-H-HSTTCEEECSCC-----
T ss_pred HHHHHHHHHC------CCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhh-c-ccCCceEEEeCe-----
Confidence 9999999995 45999999988643222111111221111111122222221110 0 000122222211
Q ss_pred CCceeeccceEecCCceEEEecEEEEeCCCC--------CCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH----
Q 010331 172 GPMACTHGGTVLLESGLIVEYDWLVLSLGAE--------PKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF---- 239 (513)
Q Consensus 172 ~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~--------~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v---- 239 (513)
.+.++++.++.||+||||||+. ++.+++||..++...+.+..++.. ......++.++
T Consensus 469 ---------~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~--~~~~~gk~VvVIG~G 537 (729)
T 1o94_A 469 ---------PMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMD--GKKKIGKRVVILNAD 537 (729)
T ss_dssp ---------CCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHH--CCSCCCSEEEEEECC
T ss_pred ---------EEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhc--CCCCCCCeEEEEcCC
Confidence 2445555578999999999998 456788987643223334444322 11100001110
Q ss_pred ---------HHHHhcC-cEEEEeccCeecCC--CChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccc
Q 010331 240 ---------ERLEEKG-IVQAINVETTICPT--GTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAI 307 (513)
Q Consensus 240 ---------~~l~~~~-~vtli~~~~~ll~~--~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~ 307 (513)
..+...+ .|+++++.+ +++. .+.. ...+.+.|+++||++++++.+.++..++
T Consensus 538 gG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~~~-------------- 601 (729)
T 1o94_A 538 TYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEPGR-------------- 601 (729)
T ss_dssp CSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEETTE--------------
T ss_pred CCchHHHHHHHHHHcCCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEECCe--------------
Confidence 3444444 599999877 5442 2222 4667788999999999999999997632
Q ss_pred cccccccCCCceEEEeccc---------------ccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeE
Q 010331 308 PNIAADKNSDKYILELQPA---------------IKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAE 372 (513)
Q Consensus 308 ~~~~~~~~~~~v~v~~~~~---------------~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~ 372 (513)
+.++.... ..+++..+++||.||+|+|.+|+++++.. + . ..
T Consensus 602 -----------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~-------l--~----~~ 657 (729)
T 1o94_A 602 -----------MEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNE-------L--K----AR 657 (729)
T ss_dssp -----------EEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHH-------H--H----HT
T ss_pred -----------EEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHHHH-------H--h----hh
Confidence 11111000 00113446999999999999999765532 1 1 13
Q ss_pred eCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCCCCCccc
Q 010331 373 TDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRF 434 (513)
Q Consensus 373 Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~~~~f~~ 434 (513)
+|+++++ +.|+|||+|||+. ++++..|++||+.+|.||.+.+...+ .||.+
T Consensus 658 vd~~~~t-~~~~VyAiGD~~~---------~~~~~~A~~~G~~aA~~i~~~l~~~~-~p~~~ 708 (729)
T 1o94_A 658 ESEWAEN-DIKGIYLIGDAEA---------PRLIADATFTGHRVAREIEEANPQIA-IPYKR 708 (729)
T ss_dssp GGGTGGG-TCCEEEECGGGTS---------CCCHHHHHHHHHHHHHTTTSSCTTSC-CCCCC
T ss_pred ccccccc-CCCCeEEEeCccc---------hhhHHHHHHHHHHHHHHhhhhcccCC-CCeee
Confidence 6888998 8999999999986 46788999999999999988776554 47743
No 80
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.93 E-value=6.9e-26 Score=235.84 Aligned_cols=289 Identities=14% Similarity=0.094 Sum_probs=185.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhh-ccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE
Q 010331 79 KPRICILGGGFGGLYTALRLES-LVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~-~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (513)
+++|||||||+||++||..|++ .......+++|+|||+.++.+.. ..+.+.++....+++...+.+++++.+++|+.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~-~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~ 81 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGL-VRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGN 81 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTH-HHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCc-cccccCCCCCCHHHHHHHHHHHHhcCCCEEEee
Confidence 4699999999999999999988 62100015699999998764322 223333333344567778888888899999876
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCC-CCCCCCCCccccCCCCCCHHHHHHHHHH------
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAE-PKLDVVPGAAEFAFPFSTLEDACRVDRK------ 230 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~-~~~~~ipG~~~~~~~~~~~~~a~~l~~~------ 230 (513)
. . + . + .|.++++ ++.||+||||||+. ++.+++||... ..+.+..++....+.
T Consensus 82 v-~-v--~-~-------------~v~~~~~-~~~~d~lViAtG~~~~~~~~ipG~~~--~gv~~~~~~~~~~~~~~d~~~ 140 (456)
T 1lqt_A 82 V-V-V--G-E-------------HVQPGEL-SERYDAVIYAVGAQSDRMLNIPGEDL--PGSIAAVDFVGWYNAHPHFEQ 140 (456)
T ss_dssp C-C-B--T-T-------------TBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTS--TTEEEHHHHHHHHTTCGGGTT
T ss_pred E-E-E--C-C-------------EEEECCC-eEeCCEEEEeeCCCCCCCCCCCCCCC--CCcEEHHHHHhhhhcCccccc
Confidence 2 1 2 1 1 2455555 57899999999997 67888999641 112222222111100
Q ss_pred -HH--HHHhhhH-----------HHHH--------------------hc--CcEEEEeccCeecCCCC------------
Q 010331 231 -LS--ELERRNF-----------ERLE--------------------EK--GIVQAINVETTICPTGT------------ 262 (513)
Q Consensus 231 -l~--~~~~~~v-----------~~l~--------------------~~--~~vtli~~~~~ll~~~~------------ 262 (513)
+. ..++.++ ..|. .. ..|+++.+...+...+.
T Consensus 141 ~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~ 220 (456)
T 1lqt_A 141 VSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDG 220 (456)
T ss_dssp CCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTT
T ss_pred chhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCC
Confidence 00 0011111 1222 22 26999998776644332
Q ss_pred -------hhH------------------HHHHHHHHHh------CCcEEEcCceeeEEeccccccccccCCCcccccccc
Q 010331 263 -------PGN------------------REAALKVLSA------RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIA 311 (513)
Q Consensus 263 -------~~~------------------~~~~~~~l~~------~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~ 311 (513)
+++ .+.+.+.+.+ +||++++++.+.++..++.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v---------------- 284 (456)
T 1lqt_A 221 VDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKV---------------- 284 (456)
T ss_dssp EEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSC----------------
T ss_pred ceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcE----------------
Confidence 111 1233344445 79999999999999864311
Q ss_pred cccCCCceEEEec---cc-------ccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccC
Q 010331 312 ADKNSDKYILELQ---PA-------IKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKG 381 (513)
Q Consensus 312 ~~~~~~~v~v~~~---~~-------~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~ 381 (513)
.++.++.. .. ...++.++++||+||+++|++|++ + . +++++++|+|.||+++|+++
T Consensus 285 -----~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l-~-------gl~~d~~g~i~vn~~~rvt~ 350 (456)
T 1lqt_A 285 -----ERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T-P-------GLPFDDQSGTIPNVGGRING 350 (456)
T ss_dssp -----CEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C-T-------TSCCBTTTTBCCEETTEETT
T ss_pred -----eEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC-C-C-------CCcccCCCCeeECCCCcCCC
Confidence 12333210 00 000122579999999999999995 2 1 47788889999999999668
Q ss_pred CCCEEEEcccccccCCCCCCCCC-chHHHHHHHHHHHHHHHHHHCCC
Q 010331 382 HPRIFALGDSSALRDSSGRPLPA-TAQVAFQQADFAGWNLWAAINDR 427 (513)
Q Consensus 382 ~p~VfaiGD~a~~~~~~g~~~~~-~a~~A~~qg~~~a~ni~~~l~~~ 427 (513)
.|+|||+|||+.. |. .+..|+.||..+|.||.+.+.+.
T Consensus 351 ~pgvya~GD~~~g--------p~~~i~~a~~~g~~~a~~i~~~l~~~ 389 (456)
T 1lqt_A 351 SPNEYVVGWIKRG--------PTGVIGTNKKDAQDTVDTLIKNLGNA 389 (456)
T ss_dssp CSSEEECTHHHHC--------SCSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeccCCC--------CchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999975 33 45579999999999999988653
No 81
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.92 E-value=3.7e-25 Score=231.56 Aligned_cols=310 Identities=15% Similarity=0.106 Sum_probs=178.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchh--h----------------------hh----
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLY--E----------------------LL---- 130 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~--~----------------------~~---- 130 (513)
.++|||||||+||+++|..|++.+....+ .+|+|||+++.+.|.+... . +.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~-~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGA-LEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCC-CCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCc-ccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 46899999999999999999996510000 5999999998665543110 0 00
Q ss_pred -hc---------c-c-cCCcchHhHHHHhcCCCeEEEEE-eEEEEeCC---CCcCcCCCceeeccceEecCCce----EE
Q 010331 131 -SG---------E-V-DAWEIAPRFADLLANTGVQFFKD-RVKLLCPS---DHLGVNGPMACTHGGTVLLESGL----IV 190 (513)
Q Consensus 131 -~g---------~-~-~~~~~~~~~~~~~~~~~v~~~~~-~V~~id~~---~~~~~~~~~v~~~~~~v~~~~g~----~i 190 (513)
.+ . . ...++...+..+.++.++++..+ +|+.|+.+ .+. ....|.+.++. ++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~---------~~~~V~~~~g~g~~~~~ 179 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQV---------EALRVISRNADGEELVR 179 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEE---------EEEEEEEEETTSCEEEE
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCce---------EEEEEEEecCCCceEEE
Confidence 00 0 0 00122233444455667777775 79998765 220 00135555554 89
Q ss_pred EecEEEEeCCCCCCCCC-CCCccc--cCCCCCCH-HHHHHHHHHHHHHHhhhH-----------HHHHhc---CcEEEEe
Q 010331 191 EYDWLVLSLGAEPKLDV-VPGAAE--FAFPFSTL-EDACRVDRKLSELERRNF-----------ERLEEK---GIVQAIN 252 (513)
Q Consensus 191 ~yD~LVlAtGs~~~~~~-ipG~~~--~~~~~~~~-~~a~~l~~~l~~~~~~~v-----------~~l~~~---~~vtli~ 252 (513)
.||+||+|||+.+..|. +++... ..+..... ++...+.......++.++ ..|... ..|++++
T Consensus 180 ~~d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~ 259 (463)
T 3s5w_A 180 TTRALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMIL 259 (463)
T ss_dssp EESEEEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEEC
T ss_pred EeCEEEECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEE
Confidence 99999999999877554 222211 11111111 111111110001112221 334433 3599999
Q ss_pred ccCeecCCC--------------------ChhHHHHHHHHHHh--------------------------CCcEEEcCcee
Q 010331 253 VETTICPTG--------------------TPGNREAALKVLSA--------------------------RKVQLVLGYFV 286 (513)
Q Consensus 253 ~~~~ll~~~--------------------~~~~~~~~~~~l~~--------------------------~gV~v~~~~~v 286 (513)
+...+++.. ++..+..+.+.+.. .||++++++.|
T Consensus 260 r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v 339 (463)
T 3s5w_A 260 RASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTV 339 (463)
T ss_dssp SSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEE
T ss_pred eCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEE
Confidence 988776532 22222222222221 69999999999
Q ss_pred eEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCC--CCCCCCCCCccCCCc
Q 010331 287 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPL--LPHVEPPNNRLHDLP 364 (513)
Q Consensus 287 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~--~~~l~~~~~~~~~~~ 364 (513)
+++..++ +.+.+.+....++ +.+++++|.||+|||++|+ ++++.... ..
T Consensus 340 ~~v~~~~-----------------------~~~~v~~~~~~~g-~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~-----~~ 390 (463)
T 3s5w_A 340 ERATATA-----------------------QGIELALRDAGSG-ELSVETYDAVILATGYERQLHRQLLEPLA-----EY 390 (463)
T ss_dssp EEEEEET-----------------------TEEEEEEEETTTC-CEEEEEESEEEECCCEECCC-CTTTGGGG-----GG
T ss_pred EEEEecC-----------------------CEEEEEEEEcCCC-CeEEEECCEEEEeeCCCCCCccchhHHHH-----HH
Confidence 9998754 4455555422222 3446999999999999999 56654321 11
Q ss_pred cCCCCCeEeCCCccccC----CCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCCCCCcc
Q 010331 365 LNARGQAETDETLCVKG----HPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFR 433 (513)
Q Consensus 365 ~~~~G~i~Vd~~l~~~~----~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~~~~f~ 433 (513)
+ |+|.||+++++.. .|+|||+|||....+ -..|.....|.+++++++.++.+...+.++.+|.
T Consensus 391 ~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g---~~~~~l~~~a~r~~~i~~~~~~~~~~~~~~~~~~ 457 (463)
T 3s5w_A 391 L---GDHEIGRDYRLQTDERCKVAIYAQGFSQASHG---LSDTLLSVLPVRAEEISGSLYQHLKPGTAARALH 457 (463)
T ss_dssp B---C--CCCTTSBCCBCTTBCSEEEESSCCHHHHC---TTTTSSTTHHHHHHHHHHHHHHHHC---------
T ss_pred h---CCcccCcccccccCCCCCCeEEEcCCCcccCC---cCccchhHHHHHHHHHHHHHHhhcCCchhHHHHh
Confidence 1 8899999999854 456999999987533 3446788899999999988887776666665554
No 82
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.92 E-value=1.1e-25 Score=255.77 Aligned_cols=301 Identities=18% Similarity=0.150 Sum_probs=187.1
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEE
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (513)
..++|+|||||+||++||.+|++. ++ +|+|||+.++.... +.........+.++.....+++++.|++++.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~------G~~~Vtv~E~~~~~GG~--~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~ 257 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL------GYSDITIFEKQEYVGGL--STSEIPQFRLPYDVVNFEIELMKDLGVKIIC 257 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT------TCCCEEEEESSSSCSTH--HHHTSCTTTSCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCEEEEECccHHHHHHHHHHHhc------CCCcEEEEeCCCCCCcc--ccccCCcccCCHHHHHHHHHHHHHCCcEEEc
Confidence 357999999999999999999995 44 79999998754321 1111111111223344445677788999988
Q ss_pred EeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCC-CCCCCCC-CCccccCCCCCCHHHHHHHHHHHH--
Q 010331 157 DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGA-EPKLDVV-PGAAEFAFPFSTLEDACRVDRKLS-- 232 (513)
Q Consensus 157 ~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs-~~~~~~i-pG~~~~~~~~~~~~~a~~l~~~l~-- 232 (513)
+..... + .+.++++.++.||+||||||+ .++.+++ ||+.+. ..+.+..++....+...
T Consensus 258 ~~~v~~----~-------------~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~-~gv~~a~~~L~~~~~~~~~ 319 (1025)
T 1gte_A 258 GKSLSE----N-------------EITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQD-QGFYTSKDFLPLVAKSSKA 319 (1025)
T ss_dssp SCCBST----T-------------SBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTT-TTEEEHHHHHHHHHHHHCB
T ss_pred ccEecc----c-------------eEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCC-CCEEEhHHHHHHHHhhccc
Confidence 754321 1 244455556789999999999 4775554 455321 11223333322111100
Q ss_pred ----------HH-HhhhH-----------HHHHhcC--cEEEEeccC-eecCCCChhHHHHHHHHHHhCCcEEEcCceee
Q 010331 233 ----------EL-ERRNF-----------ERLEEKG--IVQAINVET-TICPTGTPGNREAALKVLSARKVQLVLGYFVR 287 (513)
Q Consensus 233 ----------~~-~~~~v-----------~~l~~~~--~vtli~~~~-~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~ 287 (513)
.. ++.++ ..+...+ .|+++++.+ .+++..++.+ +.+++.||++++++.+.
T Consensus 320 ~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~e~-----~~~~~~Gv~~~~~~~~~ 394 (1025)
T 1gte_A 320 GMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEV-----ELAKEEKCEFLPFLSPR 394 (1025)
T ss_dssp TTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHHHH-----HHHHHTTCEEECSEEEE
T ss_pred ccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHHHH-----HHHHHcCCEEEeCCCce
Confidence 00 01111 3344444 599999877 4555555433 46778999999999999
Q ss_pred EEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCC-CCCCCCCCCccCCCccC
Q 010331 288 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPL-LPHVEPPNNRLHDLPLN 366 (513)
Q Consensus 288 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~-~~~l~~~~~~~~~~~~~ 366 (513)
++..++... ..+.+... +.+.++..+.. . ++..++++|.||+|+|++|+ +.++.. ..|++++
T Consensus 395 ~i~~~~g~v-----~~v~~~~~---~~~~~g~~~~~----~-g~~~~i~aD~Vi~A~G~~~~~~~l~~~----~~gl~~~ 457 (1025)
T 1gte_A 395 KVIVKGGRI-----VAVQFVRT---EQDETGKWNED----E-DQIVHLKADVVISAFGSVLRDPKVKEA----LSPIKFN 457 (1025)
T ss_dssp EEEEETTEE-----EEEEEEEE---EECTTSCEEEE----E-EEEEEEECSEEEECSCEECCCHHHHHH----TTTSCBC
T ss_pred EEEccCCeE-----EEEEEEEe---EEcCCCCcccC----C-CceEEEECCEEEECCCCCCCchhhhhc----ccCceEC
Confidence 887532100 00000000 00001111111 0 13357999999999999875 334332 1267888
Q ss_pred CCCCeEeCC-CccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHC---CC-----CCCCcccC
Q 010331 367 ARGQAETDE-TLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN---DR-----PLLPFRFQ 435 (513)
Q Consensus 367 ~~G~i~Vd~-~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~---~~-----~~~~f~~~ 435 (513)
++|+|.||+ ++|+ +.|+|||+|||+.. +.++..|++||+.+|.||.+.+. +. +..||.|.
T Consensus 458 ~~G~I~vd~~~~~T-s~~~VfA~GD~~~~--------~~~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ 526 (1025)
T 1gte_A 458 RWDLPEVDPETMQT-SEPWVFAGGDIVGM--------ANTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYT 526 (1025)
T ss_dssp TTSSBCCCTTTCBC-SSTTEEECSGGGCS--------CCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCC
T ss_pred CCCCEEECCCCCcc-CCCCEEEeCCCCCC--------chHHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCcccccc
Confidence 999999997 8998 89999999999986 67999999999999999998764 32 34567655
No 83
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.92 E-value=1.9e-25 Score=232.71 Aligned_cols=289 Identities=15% Similarity=0.138 Sum_probs=182.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEEe
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (513)
.++|||||||+||+++|..|++.+ ++++|+|||+.+..+.. ..+.+.++....+++...+.+++++.+++++.+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g----~~~~V~vie~~~~~gg~-~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~ 80 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHH----SRAHVDIYEKQLVPFGL-VRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNV 80 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC----SSCEEEEECSSSSSCTH-HHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSC
T ss_pred CceEEEECcCHHHHHHHHHHHhcC----CCCCEEEEeCCCcCCce-eecccCCCCccHHHHHHHHHHHHHhCCcEEEeee
Confidence 479999999999999999999864 34799999998865321 1111222222334566677788888899988663
Q ss_pred EEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCC-CCCCCCCccccCCCCCCHHHHHHHHHHH------
Q 010331 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEP-KLDVVPGAAEFAFPFSTLEDACRVDRKL------ 231 (513)
Q Consensus 159 V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~-~~~~ipG~~~~~~~~~~~~~a~~l~~~l------ 231 (513)
.. . + .|.+++. .+.||+||+|||+.+ +.+++||... ..+.+..+.....+..
T Consensus 81 ~v----~-~-------------~V~~~~~-~~~~d~lVlAtGs~~~~~~~ipG~~~--~gv~~~~~~~~~~~~~~d~~~~ 139 (460)
T 1cjc_A 81 EV----G-R-------------DVTVQEL-QDAYHAVVLSYGAEDHQALDIPGEEL--PGVFSARAFVGWYNGLPENREL 139 (460)
T ss_dssp CB----T-T-------------TBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTS--TTEEEHHHHHHHHTTCGGGTTC
T ss_pred EE----e-e-------------EEEeccc-eEEcCEEEEecCcCCCCCCCCCCCCC--CcEEEHHHHHHHhhcCcccccc
Confidence 21 1 1 2444343 468999999999995 7788999631 1122222221111100
Q ss_pred H---HHHhhhH-----------HHHH--------------------hcC--cEEEEeccCee--------------cCCC
Q 010331 232 S---ELERRNF-----------ERLE--------------------EKG--IVQAINVETTI--------------CPTG 261 (513)
Q Consensus 232 ~---~~~~~~v-----------~~l~--------------------~~~--~vtli~~~~~l--------------l~~~ 261 (513)
. ..++.++ ..|. ..+ .|+++.+...+ ++..
T Consensus 140 ~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~ 219 (460)
T 1cjc_A 140 APDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGT 219 (460)
T ss_dssp CCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTE
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCc
Confidence 0 0111111 2222 233 49999887654 2210
Q ss_pred -------------------Chh---HHHHHHHHHHh--------------CCcEEEcCceeeEEeccccccccccCCCcc
Q 010331 262 -------------------TPG---NREAALKVLSA--------------RKVQLVLGYFVRCIRRVGEFEASVKQPESG 305 (513)
Q Consensus 262 -------------------~~~---~~~~~~~~l~~--------------~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~ 305 (513)
+.. ..+.+.+.+.+ +||++++++.+.+|..++... .+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~------~v- 292 (460)
T 1cjc_A 220 RPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGR------RA- 292 (460)
T ss_dssp EEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSS------SE-
T ss_pred eeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCc------eE-
Confidence 110 12233344444 899999999999997642100 00
Q ss_pred cccccccccCCCceEEEecccc---------cCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCC-ccCCCCCeEeCC
Q 010331 306 AIPNIAADKNSDKYILELQPAI---------KGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDL-PLNARGQAETDE 375 (513)
Q Consensus 306 ~~~~~~~~~~~~~v~v~~~~~~---------~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~-~~~~~G~i~Vd~ 375 (513)
..+.++....+ ..++.++++||+||+++|++|++ + . ++ +.+++|.|.||+
T Consensus 293 -----------~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l-~-------gl~~~d~~g~i~vn~ 352 (460)
T 1cjc_A 293 -----------AGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I-D-------PSVPFDPKLGVVPNM 352 (460)
T ss_dssp -----------EEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C-C-------TTSCCBTTTTBCCEE
T ss_pred -----------EEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C-C-------CCcccccCCCeeECC
Confidence 12222200000 00134689999999999999995 3 1 56 788889999999
Q ss_pred CccccCCCCEEEEcccccccCCCCCCCCC-chHHHHHHHHHHHHHHHHHHCCCC
Q 010331 376 TLCVKGHPRIFALGDSSALRDSSGRPLPA-TAQVAFQQADFAGWNLWAAINDRP 428 (513)
Q Consensus 376 ~l~~~~~p~VfaiGD~a~~~~~~g~~~~~-~a~~A~~qg~~~a~ni~~~l~~~~ 428 (513)
++|+.+.|+|||+|||+.. |. .+..|+.||..+|.||...+.+..
T Consensus 353 ~~rt~~~p~vya~Gd~~~g--------~~~~i~~a~~~g~~aa~~i~~~l~~~~ 398 (460)
T 1cjc_A 353 EGRVVDVPGLYCSGWVKRG--------PTGVITTTMTDSFLTGQILLQDLKAGH 398 (460)
T ss_dssp TTEETTCTTEEECTHHHHC--------TTCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCcCcCCCCEEEEEeCCcC--------CCccHHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999548999999999975 33 466899999999999999987644
No 84
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.92 E-value=1.7e-25 Score=235.66 Aligned_cols=262 Identities=13% Similarity=0.123 Sum_probs=173.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhh-hhhc-cccCCcchHhHHHHhcCCCeEEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYE-LLSG-EVDAWEIAPRFADLLANTGVQFFK 156 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~-~~~g-~~~~~~~~~~~~~~~~~~~v~~~~ 156 (513)
++||||||||+||+++|.+|++ . ++|+|||++++..+...... ...| .....++...+.+.+ ..+++++.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~------~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~ 179 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQ------Y-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYL 179 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTT------T-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEET
T ss_pred cCCEEEECccHHHHHHHHHHHh------c-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEc
Confidence 4689999999999999999998 3 69999999886543321100 0011 001223333444444 56888765
Q ss_pred -EeEEEEeCCCCcCcCCCceeeccceEec-CCce--EEEecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHH
Q 010331 157 -DRVKLLCPSDHLGVNGPMACTHGGTVLL-ESGL--IVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLS 232 (513)
Q Consensus 157 -~~V~~id~~~~~~~~~~~v~~~~~~v~~-~~g~--~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~ 232 (513)
.+|..++.+.+. + .+.. +++. +++||+||+|||+.++.+.+||.... .+.+..++..+.+..
T Consensus 180 ~~~v~~i~~~~~~------~-----~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~--gv~~~~~~~~~~~~~- 245 (493)
T 1y56_A 180 ETSALGVFDKGEY------F-----LVPVVRGDKLIEILAKRVVLATGAIDSTMLFENNDMP--GVFRRDFALEVMNVW- 245 (493)
T ss_dssp TEEECCCEECSSS------E-----EEEEEETTEEEEEEESCEEECCCEEECCCCCTTTTST--TEEEHHHHHHHHHTS-
T ss_pred CCEEEEEEcCCcE------E-----EEEEecCCeEEEEECCEEEECCCCCccCCCCCCCCCC--CEEEcHHHHHHHHhc-
Confidence 578888765541 1 1211 3343 68999999999999998889986421 222333332221110
Q ss_pred HHHhhhHHHHHhcCcEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCccccccccc
Q 010331 233 ELERRNFERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAA 312 (513)
Q Consensus 233 ~~~~~~v~~l~~~~~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 312 (513)
.......+.++..+ ... +++.+++.||++++++.+.++..++.
T Consensus 246 --------~~~~~~~vvViGgG-------~~g----le~~l~~~GV~v~~~~~v~~i~~~~~------------------ 288 (493)
T 1y56_A 246 --------EVAPGRKVAVTGSK-------ADE----VIQELERWGIDYVHIPNVKRVEGNEK------------------ 288 (493)
T ss_dssp --------CBCSCSEEEEESTT-------HHH----HHHHHHHHTCEEEECSSEEEEECSSS------------------
T ss_pred --------ccCCCCEEEEECCC-------HHH----HHHHHHhCCcEEEeCCeeEEEecCCc------------------
Confidence 00111234444321 112 22667889999999999999986431
Q ss_pred ccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeE-eCCCccccCCCCEEEEccc
Q 010331 313 DKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAE-TDETLCVKGHPRIFALGDS 391 (513)
Q Consensus 313 ~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~-Vd~~l~~~~~p~VfaiGD~ 391 (513)
...+.+. +++++++|.||+++|.+|+++++...++ .+..+++|+|. ||++++ +.|+|||+|||
T Consensus 289 -----v~~v~~~------~g~~i~aD~Vv~a~G~~p~~~l~~~~g~---~~~~~~~g~i~~vd~~~~--s~~~vya~GD~ 352 (493)
T 1y56_A 289 -----VERVIDM------NNHEYKVDALIFADGRRPDINPITQAGG---KLRFRRGYYSPVLDEYHR--IKDGIYVAGSA 352 (493)
T ss_dssp -----CCEEEET------TCCEEECSEEEECCCEEECCHHHHHTTC---CEEEETTEEEECCCTTSE--EETTEEECSTT
T ss_pred -----eEEEEeC------CCeEEEeCEEEECCCcCcCchHHHhcCC---CccccCCceeeccccccC--cCCCEEEEecc
Confidence 1123222 6789999999999999999877654321 22335789888 899999 78999999999
Q ss_pred ccccCCCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 010331 392 SALRDSSGRPLPATAQVAFQQADFAGWNLWAAI 424 (513)
Q Consensus 392 a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l 424 (513)
+.. .++..|..||+++|.||...+
T Consensus 353 ~~~---------~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 353 VSI---------KPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp TCC---------CCHHHHHHHHHHHHHHHHHHT
T ss_pred CCc---------cCHHHHHHHHHHHHHHHHHHc
Confidence 874 478899999999999999876
No 85
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.91 E-value=4.6e-25 Score=240.90 Aligned_cols=303 Identities=16% Similarity=0.155 Sum_probs=187.0
Q ss_pred ccccccccccccc-CCcccccchHHHHHHHHHhhhcccccccccccccccCCCCCCCCCCCCeEEEECCCHHHHHHHHHh
Q 010331 20 GAWSKLFPFSSKS-YLSFKTCRKNRFISFAASNSSGRNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRL 98 (513)
Q Consensus 20 ~~~~~~~~~~~~~-~~~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VVIVGgG~AGl~aA~~L 98 (513)
+.|.+++..++-. ..+|..|..- |......+....|..++...........+...+++|||||||+||++||..|
T Consensus 317 P~l~~k~~~g~~~~~~~c~~c~~~----C~~~~~~~~~~~C~~np~~~~e~~~~~~~~~~~~~vvIIGgG~AGl~aA~~l 392 (671)
T 1ps9_A 317 AELLSKAQSGRADEINTCIGCNQA----CLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAINA 392 (671)
T ss_dssp TTHHHHHHTTCGGGCCCCCCCCTT----THHHHHTTCCCCCSSCTTTTCTTTSCCCSCSSCCEEEEECCSHHHHHHHHHH
T ss_pred cHHHHHHHcCCCCCcccccccccc----cchhccCCCceEEEeCcccccccccCCCCCCCCCeEEEECCCHHHHHHHHHH
Confidence 3444444444433 5667777653 3221111222234444443333222223334568999999999999999999
Q ss_pred hhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEEeEEEEeCCCCcCcCCCceeec
Q 010331 99 ESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTH 178 (513)
Q Consensus 99 ~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~V~~id~~~~~~~~~~~v~~~ 178 (513)
++. +++|+|||+++++.++..+.....+.....++...+.+++++.+++++.++....
T Consensus 393 ~~~------g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~---------------- 450 (671)
T 1ps9_A 393 AAR------GHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA---------------- 450 (671)
T ss_dssp HTT------TCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS----------------
T ss_pred HhC------CCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH----------------
Confidence 984 5599999999877655443333333322223344556667777888887642110
Q ss_pred cceEecCCceEE-EecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhc-
Q 010331 179 GGTVLLESGLIV-EYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNF-----------ERLEEK- 245 (513)
Q Consensus 179 ~~~v~~~~g~~i-~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~- 245 (513)
..+ .||+||||||++++.|.+||..+. .+.+..+... ......++.++ ..|...
T Consensus 451 ---------~~~~~~d~lviAtG~~p~~~~i~G~~~~--~v~~~~~~l~--~~~~~~~~VvVIGgG~~g~E~A~~l~~~G 517 (671)
T 1ps9_A 451 ---------DQLQAFDETILASGIVPRTPPIDGIDHP--KVLSYLDVLR--DKAPVGNKVAIIGCGGIGFDTAMYLSQPG 517 (671)
T ss_dssp ---------SSSCCSSEEEECCCEEECCCCCBTTTST--TEEEHHHHHT--SCCCCCSEEEEECCHHHHHHHHHHHTCCS
T ss_pred ---------HHhhcCCEEEEccCCCcCCCCCCCCCCC--cEeeHHHHhh--CCCCCCCeEEEECCChhHHHHHHHHHhcC
Confidence 113 899999999999999999997532 1112222111 00000001110 111111
Q ss_pred -------------------------------------CcEEEEeccCeecC-CCChhHHHHHHHHHHhCCcEEEcCceee
Q 010331 246 -------------------------------------GIVQAINVETTICP-TGTPGNREAALKVLSARKVQLVLGYFVR 287 (513)
Q Consensus 246 -------------------------------------~~vtli~~~~~ll~-~~~~~~~~~~~~~l~~~gV~v~~~~~v~ 287 (513)
..++++++.+..+. .+++.....+.+.|++.||++++++.+.
T Consensus 518 ~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~ 597 (671)
T 1ps9_A 518 ESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQ 597 (671)
T ss_dssp SCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEE
T ss_pred CCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEE
Confidence 23667776554443 3456667778889999999999999999
Q ss_pred EEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCC
Q 010331 288 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNA 367 (513)
Q Consensus 288 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~ 367 (513)
+++. +++.++ . ++ +.+++++|.||||+|++||++++.. +
T Consensus 598 ~i~~-------------------------~~v~~~-~---~G-~~~~i~~D~Vi~a~G~~p~~~l~~~---------l-- 636 (671)
T 1ps9_A 598 KIDD-------------------------DGLHVV-I---NG-ETQVLAVDNVVICAGQEPNRALAQP---------L-- 636 (671)
T ss_dssp EEET-------------------------TEEEEE-E---TT-EEEEECCSEEEECCCEEECCTTHHH---------H--
T ss_pred EEeC-------------------------CeEEEe-c---CC-eEEEEeCCEEEECCCccccHHHHHH---------H--
Confidence 9875 334443 1 11 2368999999999999999765431 1
Q ss_pred CCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHH
Q 010331 368 RGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNL 420 (513)
Q Consensus 368 ~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni 420 (513)
+. ..++||++|||+... ++.++.|++||..+|.||
T Consensus 637 ----------~~-~g~~v~aiGD~~~~~-------~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 637 ----------ID-SGKTVHLIGGCDVAM-------ELDARRAIAQGTRLALEI 671 (671)
T ss_dssp ----------HT-TTCCEEECGGGTCCS-------SCCHHHHHHHHHHHHHHC
T ss_pred ----------Hh-cCCCEEEECCcCccC-------chhHHHHHHHHHHHHHhC
Confidence 11 236899999999862 457999999999999986
No 86
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.91 E-value=5.6e-24 Score=222.32 Aligned_cols=263 Identities=15% Similarity=0.132 Sum_probs=166.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhh---ccccCCCCCeEEEEeCCCCcc----cCC-------------chhhhh--------
Q 010331 79 KPRICILGGGFGGLYTALRLES---LVWQDDKKPQVLLVDQSERFV----FKP-------------MLYELL-------- 130 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~---~~~~~~~~~~V~lIe~~~~~~----~~p-------------~~~~~~-------- 130 (513)
.++|+|||||+||++||..|++ .+. ...+|+|||+++... +.+ ..+..+
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~G~---~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~ 78 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEKGA---EIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKEC 78 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHTTC---CCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGG
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhcCC---CCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhh
Confidence 3699999999999999999998 544 111299999986431 100 000000
Q ss_pred ----------------hccccCCcchHhHHHHhcCCCeE--EE-EEeEEEEeCCCCcCcCCCceeeccceEecCC---c-
Q 010331 131 ----------------SGEVDAWEIAPRFADLLANTGVQ--FF-KDRVKLLCPSDHLGVNGPMACTHGGTVLLES---G- 187 (513)
Q Consensus 131 ----------------~g~~~~~~~~~~~~~~~~~~~v~--~~-~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~---g- 187 (513)
.......++...+.+++++.+++ +. ..+|+.|+...+. . .+.|.+.+ |
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~--~-------~~~V~~~~~~~g~ 149 (464)
T 2xve_A 79 LEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDS--Q-------TFTVTVQDHTTDT 149 (464)
T ss_dssp TCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTT--T-------EEEEEEEETTTTE
T ss_pred cccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCC--C-------cEEEEEEEcCCCc
Confidence 00011123334455555556765 54 4588888764320 0 01344433 3
Q ss_pred -eEEEecEEEEeCC--CCCCCCCCCCcccc------CCCCCCHHHHHHHHHHHHHHHhhhH-----------HHHHhcC-
Q 010331 188 -LIVEYDWLVLSLG--AEPKLDVVPGAAEF------AFPFSTLEDACRVDRKLSELERRNF-----------ERLEEKG- 246 (513)
Q Consensus 188 -~~i~yD~LVlAtG--s~~~~~~ipG~~~~------~~~~~~~~~a~~l~~~l~~~~~~~v-----------~~l~~~~- 246 (513)
.++.||+||+||| +.|+.|.+||.+++ ...+.+.+. + ..++.++ ..+...+
T Consensus 150 ~~~~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~---~-----~~k~VvVVG~G~sg~eiA~~l~~~g~ 221 (464)
T 2xve_A 150 IYSEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALE---F-----KDKTVLLVGSSYSAEDIGSQCYKYGA 221 (464)
T ss_dssp EEEEEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGG---G-----TTSEEEEECCSTTHHHHHHHHHHTTC
T ss_pred eEEEEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhH---c-----CCCEEEEEcCCCCHHHHHHHHHHhCC
Confidence 5789999999999 88999999997542 111222211 0 0111111 3333333
Q ss_pred cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEeccc
Q 010331 247 IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPA 326 (513)
Q Consensus 247 ~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~ 326 (513)
.|+++++.+.+++... ..||+++ ..|.++.+ +++.++
T Consensus 222 ~V~li~~~~~~~~~~~------------~~~V~~~--~~V~~i~~-------------------------~~V~~~---- 258 (464)
T 2xve_A 222 KKLISCYRTAPMGYKW------------PENWDER--PNLVRVDT-------------------------ENAYFA---- 258 (464)
T ss_dssp SEEEEECSSCCCCCCC------------CTTEEEC--SCEEEECS-------------------------SEEEET----
T ss_pred eEEEEEECCCCCCCCC------------CCceEEc--CCeEEEeC-------------------------CEEEEC----
Confidence 5899988777655321 1477776 56666653 344442
Q ss_pred ccCCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCC---ccccCCCCEEEEcccccccCCCCCCCC
Q 010331 327 IKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDET---LCVKGHPRIFALGDSSALRDSSGRPLP 403 (513)
Q Consensus 327 ~~~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~---l~~~~~p~VfaiGD~a~~~~~~g~~~~ 403 (513)
+|+++++|.||+|||++|+++++.. ..++.++.+|++ ++.+ +++ +.|+|||+|||+..
T Consensus 259 ----dG~~i~~D~Vi~atG~~p~~~~l~~----~~gl~~~~~~~v-~~~~~~~~~t-~~p~i~aiGd~~~~--------- 319 (464)
T 2xve_A 259 ----DGSSEKVDAIILCTGYIHHFPFLND----DLRLVTNNRLWP-LNLYKGVVWE-DNPKFFYIGMQDQW--------- 319 (464)
T ss_dssp ----TSCEEECSEEEECCCBCCCCTTBCT----TTCCCCCSSSCC-SSEETTTEES-SSTTEEECSCSCCS---------
T ss_pred ----CCCEEeCCEEEECCCCCCCCCCcCc----ccccccCCCccc-ccccceEecC-CCCCEEEEeCcccc---------
Confidence 6788999999999999999999875 235677766666 4433 344 89999999998763
Q ss_pred CchHHHHHHHHHHHHHHHHH
Q 010331 404 ATAQVAFQQADFAGWNLWAA 423 (513)
Q Consensus 404 ~~a~~A~~qg~~~a~ni~~~ 423 (513)
.....|..||+++|++|.+.
T Consensus 320 ~~~~~a~~qa~~~a~~l~G~ 339 (464)
T 2xve_A 320 YSFNMFDAQAWYARDVIMGR 339 (464)
T ss_dssp SCHHHHHHHHHHHHHHHTTS
T ss_pred cchHHHHHHHHHHHHHHcCC
Confidence 46789999999999998753
No 87
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.90 E-value=4.8e-24 Score=240.70 Aligned_cols=285 Identities=18% Similarity=0.120 Sum_probs=179.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCch-h-hhhhccccCCcchHhHHHHhcC-CCeEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPML-Y-ELLSGEVDAWEIAPRFADLLAN-TGVQFF 155 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~-~-~~~~g~~~~~~~~~~~~~~~~~-~~v~~~ 155 (513)
.+||||||||+||++||..|++. +++|+|||+++.+..+... + ..+.+. ...++...+.+.+.+ .+++++
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~------G~~V~lie~~~~~GG~~~~~~k~~i~~~-~~~~~~~~~~~~l~~~~~v~~~ 200 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRS------GARVMLLDERAEAGGTLLDTAGEQIDGM-DSSAWIEQVTSELAEAEETTHL 200 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSSGGGGGSSCCEETTE-EHHHHHHHHHHHHHHSTTEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhC------CCcEEEEeCCCCCCceeccCCccccCCC-CHHHHHHHHHHHHhhcCCcEEE
Confidence 46899999999999999999984 5599999998765422221 0 111111 112233333334444 489988
Q ss_pred EE-eEEEEeCCCCcCcCCCceee--ccceEec------CCceEEEecEEEEeCCCCCCCCCCCCccccCCCCCCHHHHHH
Q 010331 156 KD-RVKLLCPSDHLGVNGPMACT--HGGTVLL------ESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACR 226 (513)
Q Consensus 156 ~~-~V~~id~~~~~~~~~~~v~~--~~~~v~~------~~g~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~ 226 (513)
.+ +|..++.+.... .+.. ....+.+ +++.++.||+||||||+.++.+.+||.... .+.+..++..
T Consensus 201 ~~~~V~~i~~~~~~~----~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~--gv~~~~~~~~ 274 (965)
T 2gag_A 201 QRTTVFGSYDANYLI----AAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRP--GIMLAGAVRS 274 (965)
T ss_dssp SSEEEEEEETTTEEE----EEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCST--TEEEHHHHHH
T ss_pred eCCEEEeeecCCcee----eeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCC--CEEEhHHHHH
Confidence 65 788887543210 0000 0001211 123479999999999999998889986431 2222222222
Q ss_pred HHHHHHHH--HhhhH-----------HHHHhcC-cEEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEecc
Q 010331 227 VDRKLSEL--ERRNF-----------ERLEEKG-IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRV 292 (513)
Q Consensus 227 l~~~l~~~--~~~~v-----------~~l~~~~-~vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~ 292 (513)
+.+..... ++.++ ..|...+ .|+++++.+.+++ . .+.+++.||+|++++.+.++..+
T Consensus 275 ~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~----~-----~~~l~~~GV~v~~~~~v~~i~~~ 345 (965)
T 2gag_A 275 YLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA----A-----AAQAVADGVQVISGSVVVDTEAD 345 (965)
T ss_dssp HHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH----H-----HHHHHHTTCCEEETEEEEEEEEC
T ss_pred HHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch----h-----HHHHHhCCeEEEeCCEeEEEecc
Confidence 11110000 11111 3444444 4899998776542 1 56688999999999999999863
Q ss_pred --ccccccccCCCcccccccccccCCCceEEEeccccc-CCcceEEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCC
Q 010331 293 --GEFEASVKQPESGAIPNIAADKNSDKYILELQPAIK-GLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARG 369 (513)
Q Consensus 293 --~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~-~~~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G 369 (513)
+.+ ..+.++..+... ++++++++||.||+++|.+||++++. ..+|
T Consensus 346 ~~~~v---------------------~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~-----------~~~g 393 (965)
T 2gag_A 346 ENGEL---------------------SAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHS-----------QRQG 393 (965)
T ss_dssp TTSCE---------------------EEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHH-----------HTTC
T ss_pred CCCCE---------------------EEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHH-----------hCCC
Confidence 211 133343100000 01237899999999999999976543 2257
Q ss_pred CeEeCCCccc----cCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCC
Q 010331 370 QAETDETLCV----KGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 426 (513)
Q Consensus 370 ~i~Vd~~l~~----~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~ 426 (513)
.|.||++++. ++.|+|||+|||+.. +.. ..|..||+++|.||.+.+..
T Consensus 394 ~i~vd~~~~~~v~~ts~p~IyAaGD~a~~--------~~l-~~A~~~G~~aA~~i~~~lg~ 445 (965)
T 2gag_A 394 KLDWDTTIHAFVPADAVANQHLAGAMTGR--------LDT-ASALSTGAATGAAAATAAGF 445 (965)
T ss_dssp CEEEETTTTEEEECSCCTTEEECGGGGTC--------CSH-HHHHHHHHHHHHHHHHHTTC
T ss_pred cEEEcCcccccccCCCCCCEEEEEecCCc--------hhH-HHHHHHHHHHHHHHHHHcCC
Confidence 8999998872 489999999999985 334 48999999999999998753
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.87 E-value=4.9e-22 Score=206.92 Aligned_cols=259 Identities=17% Similarity=0.119 Sum_probs=159.9
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCC--eEEEEeCCCCc----ccCCc--------------------------
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSERF----VFKPM-------------------------- 125 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~--~V~lIe~~~~~----~~~p~-------------------------- 125 (513)
+.++|+|||||++|+++|..|++ .+. +|+|||+++.. .+.+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~------~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~ 78 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA------EKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALP 78 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT------TTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCC
T ss_pred CCCEEEEECccHHHHHHHHHHHh------cCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccC
Confidence 35799999999999999999998 455 99999997532 11110
Q ss_pred -----hhhhhh-----------c-cc--------cCCcchHhHHHHhcCCCeEEE-EEeEEEEeCCCCcCcCCCceeecc
Q 010331 126 -----LYELLS-----------G-EV--------DAWEIAPRFADLLANTGVQFF-KDRVKLLCPSDHLGVNGPMACTHG 179 (513)
Q Consensus 126 -----~~~~~~-----------g-~~--------~~~~~~~~~~~~~~~~~v~~~-~~~V~~id~~~~~~~~~~~v~~~~ 179 (513)
.+..+. + .. ...++...+.++.++.+..+. ..+|+.|+.....
T Consensus 79 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~----------- 147 (447)
T 2gv8_A 79 VYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS----------- 147 (447)
T ss_dssp BCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTE-----------
T ss_pred CccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe-----------
Confidence 000000 0 00 001222334444444444444 3588888654321
Q ss_pred ceEecCC---ce---EEEecEEEEeCCC--CCCCCCCCCcccc----------CCCCCCHHHHHHHHHHHHHHHhhhH--
Q 010331 180 GTVLLES---GL---IVEYDWLVLSLGA--EPKLDVVPGAAEF----------AFPFSTLEDACRVDRKLSELERRNF-- 239 (513)
Q Consensus 180 ~~v~~~~---g~---~i~yD~LVlAtGs--~~~~~~ipG~~~~----------~~~~~~~~~a~~l~~~l~~~~~~~v-- 239 (513)
+.|.+.+ |. ++.||+||+|||+ .|+.|.+||..++ +..+++.+. +. .++.++
T Consensus 148 ~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~---~~-----~k~VvVvG 219 (447)
T 2gv8_A 148 WVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPEL---FV-----GESVLVVG 219 (447)
T ss_dssp EEEEEEESSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGG---GT-----TCCEEEEC
T ss_pred EEEEEeecCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhh---cC-----CCEEEEEc
Confidence 2355443 55 7999999999998 7888889996531 112222211 10 011111
Q ss_pred ---------HHHHhc-Cc-EEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCccccc
Q 010331 240 ---------ERLEEK-GI-VQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIP 308 (513)
Q Consensus 240 ---------~~l~~~-~~-vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~ 308 (513)
..+... .. |+++++...+ +.+.||.+ +..|.++..++
T Consensus 220 ~G~sg~e~A~~l~~~~~~~V~l~~r~~~~---------------l~~~~i~~--~~~v~~~~~~~--------------- 267 (447)
T 2gv8_A 220 GASSANDLVRHLTPVAKHPIYQSLLGGGD---------------IQNESLQQ--VPEITKFDPTT--------------- 267 (447)
T ss_dssp SSHHHHHHHHHHTTTSCSSEEEECTTCCS---------------CBCSSEEE--ECCEEEEETTT---------------
T ss_pred cCcCHHHHHHHHHHHhCCcEEEEeCCCCc---------------CCCCCeEE--ecCeEEEecCC---------------
Confidence 233333 34 8888876544 34456663 45666665422
Q ss_pred ccccccCCCceEEEecccccCCcceE-EeeceEEEecCCCCCCCC-----CCCCCCccCCCccCCCCCeEeCCCccc--c
Q 010331 309 NIAADKNSDKYILELQPAIKGLESQI-FEADLVLWTVGSKPLLPH-----VEPPNNRLHDLPLNARGQAETDETLCV--K 380 (513)
Q Consensus 309 ~~~~~~~~~~v~v~~~~~~~~~~g~~-i~aD~vi~a~G~~p~~~~-----l~~~~~~~~~~~~~~~G~i~Vd~~l~~--~ 380 (513)
..+.++ +|++ +++|.||+|||++|++++ +... +..+..++.+.++.+.++ .
T Consensus 268 --------~~v~~~--------dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~-----~~~i~~~~~~~~~~~~~v~~~ 326 (447)
T 2gv8_A 268 --------REIYLK--------GGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSP-----ETKLIDDGSHVHNVYQHIFYI 326 (447)
T ss_dssp --------TEEEET--------TTEEECCCSEEEECCCBCCCCCCHHHHSCCST-----TTCCCSSSSSCCSEETTTEET
T ss_pred --------CEEEEC--------CCCEeccCCEEEECCCCCcCCCCCcccccccc-----cCceecCCCcccccccccccC
Confidence 334442 5665 799999999999999998 7642 122223456666655553 4
Q ss_pred CCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 010331 381 GHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAA 423 (513)
Q Consensus 381 ~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~ 423 (513)
+.|+||++||+... .++..|..||+++|+||.+.
T Consensus 327 ~~p~l~~~G~~~~~---------~~~~~a~~qa~~~a~~~~g~ 360 (447)
T 2gv8_A 327 PDPTLAFVGLALHV---------VPFPTSQAQAAFLARVWSGR 360 (447)
T ss_dssp TCTTEEESSCCBSS---------CHHHHHHHHHHHHHHHHTTS
T ss_pred CCCcEEEEeccccc---------cCchHHHHHHHHHHHHHcCC
Confidence 89999999999874 37889999999999999753
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.85 E-value=4.8e-22 Score=210.96 Aligned_cols=120 Identities=17% Similarity=0.230 Sum_probs=81.1
Q ss_pred CCeEEEECCCHHHHHHHHHhh-hccccCCCCCeEEEEeCCCCcc-------cCCc---hh----------h------hhh
Q 010331 79 KPRICILGGGFGGLYTALRLE-SLVWQDDKKPQVLLVDQSERFV-------FKPM---LY----------E------LLS 131 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~-~~~~~~~~~~~V~lIe~~~~~~-------~~p~---~~----------~------~~~ 131 (513)
.++|||||||+||+++|..|+ + .+++|+|||+++... |... .+ . ...
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~------~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~ 81 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHE------LGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKT 81 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSB
T ss_pred CCCEEEECcCHHHHHHHHHHHHc------CCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcc
Confidence 479999999999999999999 6 456999999976331 1110 00 0 000
Q ss_pred ccccCCcchHhHHHHhcCCCe--EEEE-EeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCC--CCCCCC
Q 010331 132 GEVDAWEIAPRFADLLANTGV--QFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG--AEPKLD 206 (513)
Q Consensus 132 g~~~~~~~~~~~~~~~~~~~v--~~~~-~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtG--s~~~~~ 206 (513)
......++...+.+..++.++ ++.. .+|++++.+++. ..+.|.+++|+++.||+||+||| +.++.|
T Consensus 82 ~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~---------~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p 152 (540)
T 3gwf_A 82 TYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDE---------NLWEVTTDHGEVYRAKYVVNAVGLLSAINFP 152 (540)
T ss_dssp SEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTT---------TEEEEEETTSCEEEEEEEEECCCSCCSBCCC
T ss_pred cCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCC---------CEEEEEEcCCCEEEeCEEEECCcccccCCCC
Confidence 000112344555666666776 5554 488888765430 01257888888899999999999 688899
Q ss_pred CCCCccc
Q 010331 207 VVPGAAE 213 (513)
Q Consensus 207 ~ipG~~~ 213 (513)
.+||+++
T Consensus 153 ~ipG~~~ 159 (540)
T 3gwf_A 153 NLPGLDT 159 (540)
T ss_dssp CCTTGGG
T ss_pred CCCCccc
Confidence 9999764
No 90
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.84 E-value=6.2e-20 Score=166.57 Aligned_cols=122 Identities=19% Similarity=0.242 Sum_probs=98.4
Q ss_pred HHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEec
Q 010331 265 NREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTV 344 (513)
Q Consensus 265 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~ 344 (513)
+.+.+.+.+++.||+++++ ++++++.++ +.+.++++ ++ ++++|.||+|+
T Consensus 58 ~~~~l~~~~~~~gv~v~~~-~v~~i~~~~-----------------------~~~~v~~~------~g-~i~ad~vI~A~ 106 (180)
T 2ywl_A 58 LLRRLEAHARRYGAEVRPG-VVKGVRDMG-----------------------GVFEVETE------EG-VEKAERLLLCT 106 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CCCEEEECS-----------------------SSEEEECS------SC-EEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCEEEeC-EEEEEEEcC-----------------------CEEEEEEC------CC-EEEECEEEECC
Confidence 3455667788899999999 999987644 34445542 45 89999999999
Q ss_pred CCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 010331 345 GSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAI 424 (513)
Q Consensus 345 G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l 424 (513)
|..|+. .. .++++++ +|+|.||+++|+ +.|+|||+|||+..+ +++++.|.+||+++|.||.+.+
T Consensus 107 G~~~~~--~~-----~~g~~~~-~g~i~vd~~~~t-~~~~i~a~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~~ 170 (180)
T 2ywl_A 107 HKDPTL--PS-----LLGLTRR-GAYIDTDEGGRT-SYPRVYAAGVARGKV-------PGHAIISAGDGAYVAVHLVSDL 170 (180)
T ss_dssp TTCCHH--HH-----HHTCCEE-TTEECCCTTCBC-SSTTEEECGGGGTCC-------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCc--cc-----cCCCCcc-CceEEeCCCCCc-CCCCEEEeecccCcc-------hhhHHHHHHhHHHHHHHHHHHh
Confidence 999852 22 3467788 899999999999 899999999999862 2388999999999999999999
Q ss_pred CCCCCCCcc
Q 010331 425 NDRPLLPFR 433 (513)
Q Consensus 425 ~~~~~~~f~ 433 (513)
++++..+|+
T Consensus 171 ~~~~~~~~~ 179 (180)
T 2ywl_A 171 RGEPYKDHA 179 (180)
T ss_dssp HTSCCCCCC
T ss_pred hhccccccC
Confidence 887766664
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.79 E-value=5.3e-20 Score=195.45 Aligned_cols=121 Identities=17% Similarity=0.219 Sum_probs=77.7
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC------C-c-------hhhh--hh----------
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK------P-M-------LYEL--LS---------- 131 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~------p-~-------~~~~--~~---------- 131 (513)
+.++|||||||+||+++|..|++ .+++|+|||+++..... | . .+.. ..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~------~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~ 81 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ------AGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSE 81 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSB
T ss_pred CCCCEEEECccHHHHHHHHHHHh------CCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccc
Confidence 35799999999999999999998 45599999998643100 0 0 0000 00
Q ss_pred ccccCCcchHhHHHHhcCCCe--EEEE-EeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCC--CCCCCC
Q 010331 132 GEVDAWEIAPRFADLLANTGV--QFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG--AEPKLD 206 (513)
Q Consensus 132 g~~~~~~~~~~~~~~~~~~~v--~~~~-~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtG--s~~~~~ 206 (513)
......++...+....++.++ .+.. .+|+.++.++.. ..+.|.+++|+++.||+||+||| +.++.|
T Consensus 82 ~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~---------~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p 152 (545)
T 3uox_A 82 NFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVEND---------RLWEVTLDNEEVVTCRFLISATGPLSASRMP 152 (545)
T ss_dssp SSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGG---------TEEEEEETTTEEEEEEEEEECCCSCBC---C
T ss_pred cCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCC---------CEEEEEECCCCEEEeCEEEECcCCCCCCcCC
Confidence 001122344555555555554 3443 478888654320 01257888898999999999999 889999
Q ss_pred CCCCccc
Q 010331 207 VVPGAAE 213 (513)
Q Consensus 207 ~ipG~~~ 213 (513)
.+||+++
T Consensus 153 ~ipG~~~ 159 (545)
T 3uox_A 153 DIKGIDS 159 (545)
T ss_dssp CCTTGGG
T ss_pred CCCCccc
Confidence 9999765
No 92
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.78 E-value=2.3e-18 Score=183.09 Aligned_cols=121 Identities=18% Similarity=0.202 Sum_probs=82.2
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc-------cCCc-------hhhh------------hh
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV-------FKPM-------LYEL------------LS 131 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~-------~~p~-------~~~~------------~~ 131 (513)
+.++|||||||+||+++|..|++ .+++|+|||+++... |... .+.. ..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~------~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~ 93 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS------QGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSE 93 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh------CCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCcc
Confidence 35799999999999999999998 455999999976321 1110 0000 00
Q ss_pred ccccCCcchHhHHHHhcCCCe--EEEEE-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCC--CCCCCC
Q 010331 132 GEVDAWEIAPRFADLLANTGV--QFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG--AEPKLD 206 (513)
Q Consensus 132 g~~~~~~~~~~~~~~~~~~~v--~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtG--s~~~~~ 206 (513)
......++...+.+.+++.++ ++..+ +|+.++.+++. ..+.|.+++|+++.||+||+||| +.++.|
T Consensus 94 ~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~---------~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 94 KYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEG---------LRWTVRTDRGDEVSARFLVVAAGPLSNANTP 164 (549)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTT---------TEEEEEETTCCEEEEEEEEECCCSEEECCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCC---------CEEEEEECCCCEEEeCEEEECcCCCCCCCCC
Confidence 001112445556666666766 45544 88888765430 01257888888899999999999 889999
Q ss_pred CCCCccc
Q 010331 207 VVPGAAE 213 (513)
Q Consensus 207 ~ipG~~~ 213 (513)
.+||+++
T Consensus 165 ~ipG~~~ 171 (549)
T 4ap3_A 165 AFDGLDR 171 (549)
T ss_dssp CCTTGGG
T ss_pred CCCCccc
Confidence 9999864
No 93
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.78 E-value=1.3e-18 Score=185.34 Aligned_cols=82 Identities=17% Similarity=0.210 Sum_probs=60.2
Q ss_pred cceEEeeceEEEecCCCCCCCCCCCCCCccCCCc-cCCCCCeEeC---------CCccccCCCCEEEE-cccccccCCCC
Q 010331 331 ESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLP-LNARGQAETD---------ETLCVKGHPRIFAL-GDSSALRDSSG 399 (513)
Q Consensus 331 ~g~~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~-~~~~G~i~Vd---------~~l~~~~~p~Vfai-GD~a~~~~~~g 399 (513)
+ +++++|+||||||++++++++.. ++ ...+|....+ ..+.+.++||+|++ ||.+..
T Consensus 375 d-~~~~~D~ii~atG~~~~~~~~~~-------~~i~g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~----- 441 (542)
T 1w4x_A 375 E-REYELDSLVLATGFDALTGALFK-------IDIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPS----- 441 (542)
T ss_dssp S-CEEECSEEEECCCCCCTTHHHHT-------SEEECGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSG-----
T ss_pred C-eEEecCEEEEcCCccccccCcCc-------eeeECCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCc-----
Confidence 6 88999999999999998665543 22 2233544432 23677789999998 998753
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHCC
Q 010331 400 RPLPATAQVAFQQADFAGWNLWAAIND 426 (513)
Q Consensus 400 ~~~~~~a~~A~~qg~~~a~ni~~~l~~ 426 (513)
..+..++.|.+|+++++++|....++
T Consensus 442 -~~~~~~~~~e~q~~~ia~~i~~~~~~ 467 (542)
T 1w4x_A 442 -ALSNMLVSIEQHVEWVTDHIAYMFKN 467 (542)
T ss_dssp -GGSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -ccccHHHHHHHHHHHHHHHHHHHHHC
Confidence 12456689999999999999987654
No 94
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.58 E-value=4.1e-15 Score=140.48 Aligned_cols=116 Identities=23% Similarity=0.231 Sum_probs=76.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc---CCch---------hhhh--hccccCCcchHhHH
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF---KPML---------YELL--SGEVDAWEIAPRFA 144 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~---~p~~---------~~~~--~g~~~~~~~~~~~~ 144 (513)
.++|+|||||++|+++|..|++. +.+|+|||++..... .|.. .++- .+. +...+...+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~------g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~-~~~~~~~~l~ 75 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK------GVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDE-RVWAFHARAK 75 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCC-CHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC------CCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCC-CHHHHHHHHH
Confidence 47999999999999999999994 559999999732111 1100 0000 000 1113444556
Q ss_pred HHhcCC-CeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCCCCc
Q 010331 145 DLLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGA 211 (513)
Q Consensus 145 ~~~~~~-~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ipG~ 211 (513)
+.+++. +++++..+|+++..++.. + ..|.+++|.++++|+||+|+|...+....+|.
T Consensus 76 ~~~~~~~gv~i~~~~v~~i~~~~~~------v----~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 76 YLLEGLRPLHLFQATATGLLLEGNR------V----VGVRTWEGPPARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp HHHHTCTTEEEEECCEEEEEEETTE------E----EEEEETTSCCEECSEEEECCTTCSSCEEEETT
T ss_pred HHHHcCCCcEEEEeEEEEEEEeCCE------E----EEEEECCCCEEECCEEEECCCCChhhceecCC
Confidence 667675 999998899998654320 1 13566778789999999999997654444453
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.46 E-value=1.5e-14 Score=151.02 Aligned_cols=79 Identities=14% Similarity=0.024 Sum_probs=51.8
Q ss_pred eceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHH
Q 010331 337 ADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFA 416 (513)
Q Consensus 337 aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~ 416 (513)
.|.++.+.|..|+ +.++-. .......|.|.||+++|+ +.|+|||+|||+...- .|. .+++..+..++.+.
T Consensus 291 ~~~~~~~~G~dp~-~~i~v~-----p~~~~~~GGI~vd~~~~t-~ipgLyAaGd~a~~~~-hg~--~rl~~~sl~~~~v~ 360 (472)
T 2e5v_A 291 VAKYLARHGHNYK-VKIPIF-----PAAHFVDGGIRVNIRGES-NIVNLYAIGEVSDSGL-HGA--NRLASNSLLEGLVF 360 (472)
T ss_dssp HHHHHHHTTCCTT-SCEECE-----EEEEEESCEEECCTTCBC-SSBTEEECGGGEECSS-STT--SCCTTHHHHHHHHH
T ss_pred HHHHHHHhCcCcc-cceEee-----hhhceeCCCeEECCCCcc-ccCCEEecchhccccc-CCC--CCCCcccHHHHHHH
Confidence 3667788899998 554321 112334688999999999 8999999999987311 121 24555666666666
Q ss_pred HHHHHHHHC
Q 010331 417 GWNLWAAIN 425 (513)
Q Consensus 417 a~ni~~~l~ 425 (513)
++++...+.
T Consensus 361 G~~a~~~~a 369 (472)
T 2e5v_A 361 GINLPRYVD 369 (472)
T ss_dssp HHHGGGTTT
T ss_pred HHHHHHHHH
Confidence 555544443
No 96
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.41 E-value=9.6e-12 Score=130.80 Aligned_cols=82 Identities=12% Similarity=0.132 Sum_probs=53.9
Q ss_pred cceEEeeceEEEecCCCCCCC-CCCCCCCccCCCccCCCCCeEeCCCcccc-------CCCCEEEEcccccccCCCCCCC
Q 010331 331 ESQIFEADLVLWTVGSKPLLP-HVEPPNNRLHDLPLNARGQAETDETLCVK-------GHPRIFALGDSSALRDSSGRPL 402 (513)
Q Consensus 331 ~g~~i~aD~vi~a~G~~p~~~-~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~-------~~p~VfaiGD~a~~~~~~g~~~ 402 (513)
+|+++++|.||+|||++|+.+ ++.+. ...+..|.+|++.|+.++++. ..++||+-|-+-... |-.-
T Consensus 392 dg~~~~~D~VI~ATGy~~~~p~~L~~~---~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~th---G~~~ 465 (501)
T 4b63_A 392 VKETLEVDALMVATGYNRNAHERLLSK---VQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTH---GLSD 465 (501)
T ss_dssp CCCEEEESEEEECCCEECCTHHHHTGG---GGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHH---CTTT
T ss_pred CCeEEECCEEEECcCCCCCCcchhcch---hhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCcccC---Ccch
Confidence 788999999999999998743 22221 113456778999999776652 236799999554321 2222
Q ss_pred CCchHHHHHHHHHHHH
Q 010331 403 PATAQVAFQQADFAGW 418 (513)
Q Consensus 403 ~~~a~~A~~qg~~~a~ 418 (513)
|-+...|.+.|+++..
T Consensus 466 ~~Ls~~a~R~~~I~~~ 481 (501)
T 4b63_A 466 SLLSVLAVRGGEMVQS 481 (501)
T ss_dssp TSSTTHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHH
Confidence 5566678887765543
No 97
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.05 E-value=5.4e-11 Score=122.62 Aligned_cols=96 Identities=16% Similarity=0.145 Sum_probs=67.6
Q ss_pred ChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEE
Q 010331 262 TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVL 341 (513)
Q Consensus 262 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi 341 (513)
+.++...+.+.+++.| +|++++.|++|+..+ +++.+++. +|+++.||.||
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~-----------------------~~v~v~~~------~g~~~~ad~vi 252 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQSG-----------------------DVVNVTVK------DGHAFQAHSVI 252 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECSS-----------------------SSEEEEET------TSCCEEEEEEE
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcC-----------------------CeEEEEEC------CCCEEEeCEEE
Confidence 3445566667777778 999999999998754 45666643 56679999999
Q ss_pred EecC--------CCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccc
Q 010331 342 WTVG--------SKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSS 392 (513)
Q Consensus 342 ~a~G--------~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a 392 (513)
+|+| +.|+.+...... .+. ......++|+..+++ ..++||+.||+.
T Consensus 253 ~a~~~~~l~~i~~~p~l~~~~~~~---~~~-~~~~~~~kv~~~~~~-~~~~i~~~~d~~ 306 (431)
T 3k7m_X 253 VATPMNTWRRIVFTPALPERRRSV---IEE-GHGGQGLKILIHVRG-AEAGIECVGDGI 306 (431)
T ss_dssp ECSCGGGGGGSEEESCCCHHHHHH---HHH-CCCCCEEEEEEEEES-CCTTEEEEBSSS
T ss_pred EecCcchHhheeeCCCCCHHHHHH---HHh-CCCcceEEEEEEECC-CCcCceEcCCCC
Confidence 9999 778754322110 011 122334899998888 679999999984
No 98
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.89 E-value=7.7e-12 Score=124.19 Aligned_cols=77 Identities=14% Similarity=0.024 Sum_probs=49.8
Q ss_pred EEeeceEEEecCCCCCCCCCCCCCCccCCCccCCCCCeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHH
Q 010331 334 IFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQA 413 (513)
Q Consensus 334 ~i~aD~vi~a~G~~p~~~~l~~~~~~~~~~~~~~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg 413 (513)
.+++|.++.+.|.+|.. ..+. .+.|.+|..+++ +.|+|||+||++...+... ...++...++..|
T Consensus 249 ~~~~~~~~~~~g~~~~~------------~~~~-e~~iv~~~~~~t-~vpGv~aaGDaa~~v~g~~-rmGp~~g~mi~SG 313 (326)
T 3fpz_A 249 IVDIDQNQKLGGMKGLD------------MNHA-EHDVVIHSGAYA-GVDNMYFAGMEVAELDGLN-RMGPTFGAMALSG 313 (326)
T ss_dssp HHHHCTTCCCCCCCCBC------------HHHH-HHHHHHHCEECT-TSBTEEECTHHHHHHHTCC-BCCSCCHHHHHHH
T ss_pred EEecCceeeecceeccc------------cccc-CCeEEECCCeEE-CCCCEEEEchHhccccCCC-cCchHHHHHHHHH
Confidence 35556666666665531 2222 355777888887 8999999999987543210 0112444567789
Q ss_pred HHHHHHHHHHHC
Q 010331 414 DFAGWNLWAAIN 425 (513)
Q Consensus 414 ~~~a~ni~~~l~ 425 (513)
+.+|+.|...|.
T Consensus 314 ~~AAe~I~~~la 325 (326)
T 3fpz_A 314 VHAAEQILKHFA 325 (326)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999988763
No 99
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.72 E-value=2.3e-08 Score=106.48 Aligned_cols=118 Identities=21% Similarity=0.256 Sum_probs=77.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC-cccC---Cch---------hhh--hhcc----------
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER-FVFK---PML---------YEL--LSGE---------- 133 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~-~~~~---p~~---------~~~--~~g~---------- 133 (513)
.+||||||||+||++||..|++. +.+|+|||++.. .... |.. .++ ..+.
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~------G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi 101 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARM------GQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGI 101 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEE
T ss_pred cCCEEEECChHHHHHHHHHHHhC------CCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhccc
Confidence 57999999999999999999994 559999998741 1110 000 000 0000
Q ss_pred -------------------ccCCcchHhHHHHhcC-CCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEec
Q 010331 134 -------------------VDAWEIAPRFADLLAN-TGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYD 193 (513)
Q Consensus 134 -------------------~~~~~~~~~~~~~~~~-~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD 193 (513)
.+...+...+.+.+++ .++++++++|+.+..++.. + ..|.+.+|.++.+|
T Consensus 102 ~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~------V----~GV~t~dG~~I~Ad 171 (651)
T 3ces_A 102 QFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDR------V----VGAVTQMGLKFRAK 171 (651)
T ss_dssp EEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSB------E----EEEEETTSEEEEEE
T ss_pred chhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCE------E----EEEEECCCCEEECC
Confidence 0001233445556666 6999988899998654321 1 13666778889999
Q ss_pred EEEEeCCCCCCCCCCCCcc
Q 010331 194 WLVLSLGAEPKLDVVPGAA 212 (513)
Q Consensus 194 ~LVlAtGs~~~~~~ipG~~ 212 (513)
.||+|||+.+..+.++|..
T Consensus 172 ~VVLATGt~s~~~~i~G~~ 190 (651)
T 3ces_A 172 AVVLTVGTFLDGKIHIGLD 190 (651)
T ss_dssp EEEECCSTTTCCEEECC--
T ss_pred EEEEcCCCCccCccccCcc
Confidence 9999999988766677754
No 100
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.71 E-value=2.8e-08 Score=105.44 Aligned_cols=118 Identities=16% Similarity=0.197 Sum_probs=78.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC-CcccC---Cc--------h-hhh--hhcc----------
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE-RFVFK---PM--------L-YEL--LSGE---------- 133 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~-~~~~~---p~--------~-~~~--~~g~---------- 133 (513)
.+||||||||+||++||..|++. +.+|+|||++. ..... |. + .++ +.+.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~------G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi 100 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARM------GAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGI 100 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHC------CCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhccc
Confidence 47999999999999999999994 55999999974 11110 00 0 000 0010
Q ss_pred -------------------ccCCcchHhHHHHhcC-CCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEEec
Q 010331 134 -------------------VDAWEIAPRFADLLAN-TGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYD 193 (513)
Q Consensus 134 -------------------~~~~~~~~~~~~~~~~-~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD 193 (513)
.+...+...+.+.+++ .++++++++|+.+..++.. + ..|.+.+|.++.+|
T Consensus 101 ~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~------V----~GV~t~dG~~i~Ad 170 (637)
T 2zxi_A 101 QFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQ------V----VGVRTNLGVEYKTK 170 (637)
T ss_dssp EEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSB------E----EEEEETTSCEEECS
T ss_pred ceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCE------E----EEEEECCCcEEEeC
Confidence 0011233445566666 5999988899998654431 1 12667788889999
Q ss_pred EEEEeCCCCCCCCCCCCcc
Q 010331 194 WLVLSLGAEPKLDVVPGAA 212 (513)
Q Consensus 194 ~LVlAtGs~~~~~~ipG~~ 212 (513)
.||+|||..++.+.++|..
T Consensus 171 aVVLATG~~s~~~~~~G~~ 189 (637)
T 2zxi_A 171 AVVVTTGTFLNGVIYIGDK 189 (637)
T ss_dssp EEEECCTTCBTCEEEETTE
T ss_pred EEEEccCCCccCceeccce
Confidence 9999999988776677654
No 101
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.71 E-value=1.7e-08 Score=103.37 Aligned_cols=108 Identities=22% Similarity=0.279 Sum_probs=70.8
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC-----------------C---------chhhhh-
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-----------------P---------MLYELL- 130 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~-----------------p---------~~~~~~- 130 (513)
+.+||+|||||+||++||..|++. +.+|+|||+++..... + .....+
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~------G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~ 99 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKR------GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALA 99 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHH
Confidence 357999999999999999999994 5599999998742110 0 000000
Q ss_pred ----------------------hcc----ccCCcchHhHHHHhcCCCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEe
Q 010331 131 ----------------------SGE----VDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVL 183 (513)
Q Consensus 131 ----------------------~g~----~~~~~~~~~~~~~~~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~ 183 (513)
.+. ....++...+.+.+++.|++++.+ +|++|..++.. ..|.
T Consensus 100 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~-----------~~V~ 168 (417)
T 3v76_A 100 RYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG-----------FRVT 168 (417)
T ss_dssp HSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-----------EEEE
T ss_pred hcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-----------EEEE
Confidence 000 000123344555555678999875 88888654321 2577
Q ss_pred cCCceEEEecEEEEeCCCCC
Q 010331 184 LESGLIVEYDWLVLSLGAEP 203 (513)
Q Consensus 184 ~~~g~~i~yD~LVlAtGs~~ 203 (513)
+++| ++.+|+||+|+|...
T Consensus 169 ~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 169 TSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp ETTE-EEEESEEEECCCCSS
T ss_pred ECCc-EEEeeEEEECCCCcc
Confidence 7777 899999999999875
No 102
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.71 E-value=2.5e-08 Score=104.58 Aligned_cols=120 Identities=19% Similarity=0.225 Sum_probs=76.2
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC---chh---hhhh--------cc--------c
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP---MLY---ELLS--------GE--------V 134 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p---~~~---~~~~--------g~--------~ 134 (513)
...++|+|||||++|+++|..|++. +++|+|||+++...... ..+ +.+. +. .
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~------G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 163 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL------GARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHI 163 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEE
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC------CCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccC
Confidence 3468999999999999999999984 56999999987432110 001 0000 00 0
Q ss_pred cCCcchHhHHHHhcCCCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEec--C-Cc--eEEEecEEEEeCCCCCCCCCC
Q 010331 135 DAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLL--E-SG--LIVEYDWLVLSLGAEPKLDVV 208 (513)
Q Consensus 135 ~~~~~~~~~~~~~~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~--~-~g--~~i~yD~LVlAtGs~~~~~~i 208 (513)
...++...+.+.+++.+++++.+ +|+++..++.. ... ..|.+ . +| .++.+|+||+|+|..+.....
T Consensus 164 ~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~---~~~-----~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~ 235 (497)
T 2bry_A 164 SIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRK---GSG-----WRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGF 235 (497)
T ss_dssp EHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCST---TCC-----BEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTC
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCC---CCE-----EEEEEEECCCCCEEEEEcCEEEECCCCCcccccc
Confidence 11233344555666679999886 89998754210 000 13444 3 56 578999999999998765444
Q ss_pred CC
Q 010331 209 PG 210 (513)
Q Consensus 209 pG 210 (513)
.+
T Consensus 236 ~~ 237 (497)
T 2bry_A 236 TI 237 (497)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 103
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.70 E-value=2.9e-08 Score=100.31 Aligned_cols=105 Identities=23% Similarity=0.289 Sum_probs=70.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-----------------chhhhhh----------
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-----------------MLYELLS---------- 131 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-----------------~~~~~~~---------- 131 (513)
.++|+|||||++|+++|..|++. +++|+|||+.+.....+ ....+..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~------G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 84 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN------GWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYET 84 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEE
Confidence 47999999999999999999984 56999999976432111 0000000
Q ss_pred ---c--------------cccCCcchHhHHHHhcCCCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEec
Q 010331 132 ---G--------------EVDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYD 193 (513)
Q Consensus 132 ---g--------------~~~~~~~~~~~~~~~~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD 193 (513)
| ......+...+.+.+.+.|++++.+ +|++++.+ + .|.+++|+++++|
T Consensus 85 ~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------------~-~v~~~~g~~~~ad 150 (379)
T 3alj_A 85 WMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPV-------------G-RLTLQTGEVLEAD 150 (379)
T ss_dssp EETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETT-------------T-EEEETTSCEEECS
T ss_pred EeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeC-------------C-EEEECCCCEEEcC
Confidence 0 0000122333445555678998876 78888641 1 3677788889999
Q ss_pred EEEEeCCCCC
Q 010331 194 WLVLSLGAEP 203 (513)
Q Consensus 194 ~LVlAtGs~~ 203 (513)
+||.|+|...
T Consensus 151 ~vV~AdG~~s 160 (379)
T 3alj_A 151 LIVGADGVGS 160 (379)
T ss_dssp EEEECCCTTC
T ss_pred EEEECCCccH
Confidence 9999999864
No 104
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.68 E-value=1.3e-07 Score=99.09 Aligned_cols=57 Identities=16% Similarity=0.166 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceE-EEecccccCCcceEEeeceEE
Q 010331 263 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI-LELQPAIKGLESQIFEADLVL 341 (513)
Q Consensus 263 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~~~~~~~~g~~i~aD~vi 341 (513)
..+.+.+.+.+++.|++|++++.|++|..++ +++. |++. +|+++.||.||
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~-----------------------~~~~gV~~~------~g~~~~ad~VV 271 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTG-----------------------NKIEAVHLE------DGRRFLTQAVA 271 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-----------------------TEEEEEEET------TSCEEECSCEE
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeC-----------------------CeEEEEEec------CCcEEEcCEEE
Confidence 4456667788899999999999999998765 3332 4443 88999999999
Q ss_pred EecCCCC
Q 010331 342 WTVGSKP 348 (513)
Q Consensus 342 ~a~G~~p 348 (513)
.+++...
T Consensus 272 ~~a~~~~ 278 (501)
T 4dgk_A 272 SNADVVH 278 (501)
T ss_dssp ECCC---
T ss_pred ECCCHHH
Confidence 9887643
No 105
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.68 E-value=2.8e-08 Score=104.78 Aligned_cols=48 Identities=6% Similarity=-0.064 Sum_probs=41.2
Q ss_pred CeEeCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHC
Q 010331 370 QAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 425 (513)
Q Consensus 370 ~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~ 425 (513)
+|.+|+++++.+.+|+|++||++.+ ..-...|..+|..+|+.|...+.
T Consensus 496 ri~~~~~~~~~~~~gly~~GegaG~--------a~gi~~Aa~~G~~~a~~i~~~~~ 543 (549)
T 3nlc_A 496 CIKRGKDFQSVNLKGFYPAGEGAGY--------AGGILSAGIDGIKVAEAVARDIV 543 (549)
T ss_dssp ECCCTTTTSCTTCBTEEECHHHHTS--------CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEECCCceECCcCCEEEccccCCh--------hhHHHHHHHHHHHHHHHHHHHhh
Confidence 3778899998889999999999997 56777888899999999988764
No 106
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.67 E-value=3.5e-08 Score=100.50 Aligned_cols=46 Identities=13% Similarity=0.116 Sum_probs=37.7
Q ss_pred eC-CCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHH
Q 010331 373 TD-ETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLW 421 (513)
Q Consensus 373 Vd-~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~ 421 (513)
+| ++|+++..||+|++|++..+..+.| --+-|.|...|..+++++.
T Consensus 353 ~~~~tmes~~~~gly~~GE~ldv~g~~G---Gynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 353 ISSKTMESNQVSGLYFIGEVLDVTGWLG---GYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp BCTTTCBBSSSTTEEECGGGBSCEECTT---THHHHHHHHHHHHHHHHHH
T ss_pred CChhhccccCCCCEEEEEEeEEeccCCC---CHHHHHHHHHHHHHHHHHh
Confidence 67 7899888999999999999855433 3567889999999998874
No 107
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.65 E-value=3.2e-08 Score=106.01 Aligned_cols=55 Identities=22% Similarity=0.203 Sum_probs=39.3
Q ss_pred CCCeEeCCCccccCCCCEEEEcccccccCCCCC-CCCC-chHHHHHHHHHHHHHHHHHH
Q 010331 368 RGQAETDETLCVKGHPRIFALGDSSALRDSSGR-PLPA-TAQVAFQQADFAGWNLWAAI 424 (513)
Q Consensus 368 ~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~-~~~~-~a~~A~~qg~~~a~ni~~~l 424 (513)
.|.|.||.+.|+ ..|++||+|+|+...- .|. .+.. ....+.-.|+.+++++...+
T Consensus 359 ~GGi~vd~~~~~-~IpGLyAaGe~a~~g~-hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 359 MGGIETDQNCET-RIKGLFAVGECSSVGL-HGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp CCEEECCTTSBC-SSBTEEECGGGEECSS-STTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEECCCCcc-ccCCEEEccccccccc-cCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 588999999999 8999999999974211 111 1111 23456677999999998776
No 108
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.65 E-value=7.6e-08 Score=93.25 Aligned_cols=113 Identities=19% Similarity=0.203 Sum_probs=67.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCc-----h---------hhhhh--c-------cc-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-----L---------YELLS--G-------EV- 134 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~-----~---------~~~~~--g-------~~- 134 (513)
.+||||||||++|+++|..|++. ++.+|+|||+++....... + .+++. | .+
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~-----~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~ 113 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKN-----PNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYV 113 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTS-----TTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEE
T ss_pred ccCEEEECccHHHHHHHHHHHHc-----CCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEE
Confidence 46999999999999999999983 2669999999874321100 0 00000 0 00
Q ss_pred ---cCCcchHhHHHHh-cCCCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEe-----cC--Cc-----eEEEecEEEE
Q 010331 135 ---DAWEIAPRFADLL-ANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVL-----LE--SG-----LIVEYDWLVL 197 (513)
Q Consensus 135 ---~~~~~~~~~~~~~-~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~-----~~--~g-----~~i~yD~LVl 197 (513)
...++...+.+.+ +..+++++.+ +|+.+..++. .+. +-.+. ++ ++ .++++|.||+
T Consensus 114 ~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~------~v~--gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~ 185 (284)
T 1rp0_A 114 VVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGN------RVG--GVVTNWALVAQNHHTQSCMDPNVMEAKIVVS 185 (284)
T ss_dssp EESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETT------EEE--EEEEEEHHHHTCTTTSSCCCCEEEEEEEEEE
T ss_pred EecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCC------eEE--EEEEeccccccccCccccCceEEEECCEEEE
Confidence 1112222333334 3469999886 8888865432 010 00111 11 22 5799999999
Q ss_pred eCCCCCC
Q 010331 198 SLGAEPK 204 (513)
Q Consensus 198 AtGs~~~ 204 (513)
|+|..+.
T Consensus 186 AtG~~s~ 192 (284)
T 1rp0_A 186 SCGHDGP 192 (284)
T ss_dssp CCCSSST
T ss_pred CCCCchH
Confidence 9998754
No 109
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.63 E-value=6.6e-08 Score=98.33 Aligned_cols=110 Identities=20% Similarity=0.237 Sum_probs=70.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-----------------chhhhh-----------
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-----------------MLYELL----------- 130 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-----------------~~~~~~----------- 130 (513)
.++|+|||||++|+++|..|++. +++|+|||+++...... ....+.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~------G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 79 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ------GHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELE 79 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHhC------CCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEE
Confidence 46999999999999999999994 56999999976431000 000000
Q ss_pred ---hc----c--------------ccCCcchHhHHHHhcCC-CeEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCCc
Q 010331 131 ---SG----E--------------VDAWEIAPRFADLLANT-GVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESG 187 (513)
Q Consensus 131 ---~g----~--------------~~~~~~~~~~~~~~~~~-~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g 187 (513)
.| . ++...+...+.+.+++. +++++.+ +|++++.++.. +. ..|.+++|
T Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~------v~---g~v~~~~g 150 (399)
T 2x3n_A 80 VYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH------AI---DQVRLNDG 150 (399)
T ss_dssp EEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS------CE---EEEEETTS
T ss_pred EeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc------eE---EEEEECCC
Confidence 01 0 00112233344555565 8999875 89998765431 10 03667788
Q ss_pred eEEEecEEEEeCCCCC
Q 010331 188 LIVEYDWLVLSLGAEP 203 (513)
Q Consensus 188 ~~i~yD~LVlAtGs~~ 203 (513)
+++++|.||.|+|...
T Consensus 151 ~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 151 RVLRPRVVVGADGIAS 166 (399)
T ss_dssp CEEEEEEEEECCCTTC
T ss_pred CEEECCEEEECCCCCh
Confidence 8899999999999764
No 110
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.61 E-value=6e-08 Score=103.22 Aligned_cols=118 Identities=17% Similarity=0.233 Sum_probs=75.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC-cccC---Cch---------hhh--hhc---------
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER-FVFK---PML---------YEL--LSG--------- 132 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~-~~~~---p~~---------~~~--~~g--------- 132 (513)
...+||||||||+||++||..|++. +.+|+|||+++. .... |.. .++ ..+
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~------G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~ 92 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARG------GLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDAT 92 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHH
T ss_pred cCcCCEEEECccHHHHHHHHHHHHC------CCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhc
Confidence 3458999999999999999999994 559999999741 1110 100 000 000
Q ss_pred --------------------cccCCcchHhHHHHhcC-CCeEEEEEeEEEEeCCCCcCcCCCceeeccceEecCCceEEE
Q 010331 133 --------------------EVDAWEIAPRFADLLAN-TGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVE 191 (513)
Q Consensus 133 --------------------~~~~~~~~~~~~~~~~~-~~v~~~~~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~ 191 (513)
..+...+...+.+.+++ .++++++++|+.+..++.. +. .|.+.+|.++.
T Consensus 93 gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~------V~----GV~t~~G~~i~ 162 (641)
T 3cp8_A 93 GIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGK------FS----SVTVRSGRAIQ 162 (641)
T ss_dssp EEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTE------EE----EEEETTSCEEE
T ss_pred CCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCE------EE----EEEECCCcEEE
Confidence 00011233445556666 4899988899988654321 10 15667788999
Q ss_pred ecEEEEeCCCCCCCCCCCC
Q 010331 192 YDWLVLSLGAEPKLDVVPG 210 (513)
Q Consensus 192 yD~LVlAtGs~~~~~~ipG 210 (513)
+|.||+|||..++...++|
T Consensus 163 Ad~VVLATG~~s~~~i~~G 181 (641)
T 3cp8_A 163 AKAAILACGTFLNGLIHIG 181 (641)
T ss_dssp EEEEEECCTTCBTCEEEET
T ss_pred eCEEEECcCCCCCccceee
Confidence 9999999999866443444
No 111
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.61 E-value=2.5e-07 Score=94.82 Aligned_cols=60 Identities=13% Similarity=0.132 Sum_probs=46.6
Q ss_pred CCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeec
Q 010331 259 PTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEAD 338 (513)
Q Consensus 259 ~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD 338 (513)
......+.+.+.+.+++.|++|++++.|++|..++ +++ +. .+++++.||
T Consensus 185 ~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-----------------------~~v-V~-------~~g~~~~ad 233 (421)
T 3nrn_A 185 RGGCKAVIDELERIIMENKGKILTRKEVVEINIEE-----------------------KKV-YT-------RDNEEYSFD 233 (421)
T ss_dssp TTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETTT-----------------------TEE-EE-------TTCCEEECS
T ss_pred cCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEEC-----------------------CEE-EE-------eCCcEEEeC
Confidence 33446677777888999999999999999998754 445 43 266789999
Q ss_pred eEEEecCCCCC
Q 010331 339 LVLWTVGSKPL 349 (513)
Q Consensus 339 ~vi~a~G~~p~ 349 (513)
.||+|+|....
T Consensus 234 ~Vv~a~~~~~~ 244 (421)
T 3nrn_A 234 VAISNVGVRET 244 (421)
T ss_dssp EEEECSCHHHH
T ss_pred EEEECCCHHHH
Confidence 99999997643
No 112
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.57 E-value=9.2e-08 Score=98.94 Aligned_cols=111 Identities=22% Similarity=0.364 Sum_probs=71.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc------------C-C-chhhh-------------
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF------------K-P-MLYEL------------- 129 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~------------~-p-~~~~~------------- 129 (513)
.+.+||||||||+||+++|..|++. +.+|+|||+.+.... . . .+..+
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~------G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEE------GANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYS 97 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHC------CCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHH
Confidence 3457999999999999999999984 569999999763210 0 0 00000
Q ss_pred -h-----------------------hcccc-----CCcchHhHHHHhcCCCeEEEEE-eEEEEeCCCCcCcCCCceeecc
Q 010331 130 -L-----------------------SGEVD-----AWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHG 179 (513)
Q Consensus 130 -~-----------------------~g~~~-----~~~~~~~~~~~~~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~ 179 (513)
+ .|..- ...+...+.+.+++.|++++.+ +|+++..++. .+
T Consensus 98 ~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~------~v---- 167 (447)
T 2i0z_A 98 AFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENG------QT---- 167 (447)
T ss_dssp HHHHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETT------EE----
T ss_pred HHHhcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCC------cE----
Confidence 0 00000 0123334455556678998875 8888864332 00
Q ss_pred ceEecCCceEEEecEEEEeCCCCC
Q 010331 180 GTVLLESGLIVEYDWLVLSLGAEP 203 (513)
Q Consensus 180 ~~v~~~~g~~i~yD~LVlAtGs~~ 203 (513)
..|.+++|+++.+|.||+|+|...
T Consensus 168 ~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 168 KAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp EEEEETTCCEEECSCEEECCCCSS
T ss_pred EEEEECCCCEEECCEEEECCCCCc
Confidence 146677786799999999999875
No 113
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.57 E-value=5e-08 Score=98.45 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=31.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..++||||||||++|+++|+.|++ .+++|+|||+..
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~------~G~~V~llE~~~ 50 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAK------ENKNTALFESGT 50 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHh------CCCcEEEEeCCC
Confidence 345799999999999999999999 456999999965
No 114
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.53 E-value=4.5e-07 Score=91.76 Aligned_cols=35 Identities=20% Similarity=0.365 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
++||||||||+||+++|..|++. +++|+|||+++.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~------G~~V~l~E~~~~ 38 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKY------GLKTLMIEKRPE 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCC
Confidence 36999999999999999999994 569999999874
No 115
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.51 E-value=1.3e-07 Score=99.50 Aligned_cols=34 Identities=26% Similarity=0.421 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|||||||+||+++|..|++ .+++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~------~G~~V~liE~~~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAM------RGHRVLLLEREA 40 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT------TTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh------CCCCEEEEccCC
Confidence 4799999999999999999998 456999999986
No 116
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.49 E-value=1.9e-07 Score=95.27 Aligned_cols=37 Identities=19% Similarity=0.360 Sum_probs=31.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
.++++|+|||||++|+++|..|++. +++|+|||+.+.
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~------G~~V~v~E~~~~ 57 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS------GIDCDVYEAVKE 57 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCC
Confidence 4468999999999999999999994 569999999763
No 117
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.49 E-value=3.7e-07 Score=90.22 Aligned_cols=34 Identities=38% Similarity=0.504 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+++|+|||||++|+++|..|++ .+++|+|||+++
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~------~G~~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTA------AGHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH------TTCCEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHH------CCCcEEEEECCC
Confidence 4699999999999999999999 456999999986
No 118
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.49 E-value=1e-07 Score=97.57 Aligned_cols=110 Identities=19% Similarity=0.161 Sum_probs=68.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc------CCch----------hhhhh-c---------
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF------KPML----------YELLS-G--------- 132 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~------~p~~----------~~~~~-g--------- 132 (513)
.+||||||||++|+++|..|++ .+++|+|||+++...+ .|.. ..+.. +
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~------~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 78 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK------SGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKF 78 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT------TTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHh------CCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEE
Confidence 4799999999999999999998 4569999999762111 0100 00000 0
Q ss_pred -----------------------cccCCcchHhHHHHhcCCCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCCce
Q 010331 133 -----------------------EVDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGL 188 (513)
Q Consensus 133 -----------------------~~~~~~~~~~~~~~~~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~ 188 (513)
.++...+...+.+.+++.|++++.+ +|+++..++.. +. ..+.+++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~------~~---v~v~~~~g~ 149 (421)
T 3nix_A 79 VRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTD------SV---TTIEDINGN 149 (421)
T ss_dssp EETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTE------EE---EEEEETTSC
T ss_pred EeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE------EE---EEEEcCCCC
Confidence 0000112223344444568999876 88888654320 10 135557776
Q ss_pred --EEEecEEEEeCCCCC
Q 010331 189 --IVEYDWLVLSLGAEP 203 (513)
Q Consensus 189 --~i~yD~LVlAtGs~~ 203 (513)
++.+|.||.|+|...
T Consensus 150 ~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 150 KREIEARFIIDASGYGR 166 (421)
T ss_dssp EEEEEEEEEEECCGGGC
T ss_pred EEEEEcCEEEECCCCch
Confidence 699999999999754
No 119
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.49 E-value=3.2e-07 Score=92.87 Aligned_cols=100 Identities=24% Similarity=0.219 Sum_probs=76.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+|+|+.+..... ....++...+.+.+++.|++++.+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~~----------~~~~~~~~~l~~~l~~~gv~i~~~~ 208 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSG------GYQLDVVAPCEQVMPG----------LLHPAAAKAVQAGLEGLGVRFHLGP 208 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTT----------TSCHHHHHHHHHHHHTTTCEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEecCcchhhc----------ccCHHHHHHHHHHHHHcCCEEEeCC
Confidence 57999999999999999999985 4599999997743211 112244566677788889999987
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~ 205 (513)
+|+.++.++.. ..|.+++|+++++|.||+|+|.+|+.
T Consensus 209 ~v~~i~~~~~~-----------~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 209 VLASLKKAGEG-----------LEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp CEEEEEEETTE-----------EEEEETTSCEEEESEEEECSCEEECC
T ss_pred EEEEEEecCCE-----------EEEEECCCCEEECCEEEECcCCCcCH
Confidence 78888654321 14677788889999999999988763
No 120
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.48 E-value=3.9e-07 Score=92.68 Aligned_cols=36 Identities=25% Similarity=0.379 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
+.++|+|||||++|+++|..|++ .+++|+|||+.+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~------~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQ------NGIDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT------TTCEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCCC
Confidence 35799999999999999999998 4569999999764
No 121
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.47 E-value=1.8e-07 Score=93.47 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.+||||||||++|+++|+.|++ .+++|+|||+++
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~------~G~~V~vlE~~~ 37 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA------GGHEVLVAEAAE 37 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCC
Confidence 4799999999999999999999 456999999985
No 122
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.47 E-value=2.6e-07 Score=98.60 Aligned_cols=109 Identities=21% Similarity=0.301 Sum_probs=69.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC----------------chhhhhh-----------
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP----------------MLYELLS----------- 131 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p----------------~~~~~~~----------- 131 (513)
.++|||||||+||+++|..|++. +++|+|||+.+...... .+..+..
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~------G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 96 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKL------GHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATF 96 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHcC------CCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEE
Confidence 57999999999999999999994 56999999975211100 0000000
Q ss_pred --c------------------------cccCCcchHhHHHHhcCCCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEec
Q 010331 132 --G------------------------EVDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLL 184 (513)
Q Consensus 132 --g------------------------~~~~~~~~~~~~~~~~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~ 184 (513)
+ .++...+...+.+.+++.|++++.+ +|+++..++.. . ..|.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~-----~-----~~V~~ 166 (591)
T 3i3l_A 97 LWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPD-----R-----VVLTV 166 (591)
T ss_dssp ECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTT-----C-----EEEEE
T ss_pred EecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCC-----E-----EEEEE
Confidence 0 0001112233444555679999976 89999764210 0 13555
Q ss_pred C-Cc--eEEEecEEEEeCCCCC
Q 010331 185 E-SG--LIVEYDWLVLSLGAEP 203 (513)
Q Consensus 185 ~-~g--~~i~yD~LVlAtGs~~ 203 (513)
. +| .++.+|.||.|+|...
T Consensus 167 ~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 167 RRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp EETTEEEEEEESEEEECCGGGC
T ss_pred ecCCceEEEEcCEEEECCCCcc
Confidence 4 55 5799999999999753
No 123
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.46 E-value=4.5e-07 Score=93.73 Aligned_cols=103 Identities=14% Similarity=0.204 Sum_probs=75.9
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (513)
..++|+|||||++|+.+|..|++. +.+|+|+|+.+..... ....++...+.+.+++.|++++.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~gv~i~~~ 211 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKA------GKKVTVIDILDRPLGV----------YLDKEFTDVLTEEMEANNITIATG 211 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTT----------TCCHHHHHHHHHHHHTTTEEEEES
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCeEEEEecCcccccc----------cCCHHHHHHHHHHHHhCCCEEEcC
Confidence 457999999999999999999985 4599999998743211 011245566777788899999986
Q ss_pred -eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCC
Q 010331 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVV 208 (513)
Q Consensus 158 -~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~i 208 (513)
+|+.++.+++. ..+.+ ++.++++|.||+|+|.+|+...+
T Consensus 212 ~~v~~i~~~~~v-----------~~v~~-~~~~i~~d~vi~a~G~~p~~~~~ 251 (447)
T 1nhp_A 212 ETVERYEGDGRV-----------QKVVT-DKNAYDADLVVVAVGVRPNTAWL 251 (447)
T ss_dssp CCEEEEECSSBC-----------CEEEE-SSCEEECSEEEECSCEEESCGGG
T ss_pred CEEEEEEccCcE-----------EEEEE-CCCEEECCEEEECcCCCCChHHH
Confidence 89999765321 12444 44589999999999998875433
No 124
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.46 E-value=2.5e-07 Score=95.93 Aligned_cols=101 Identities=23% Similarity=0.419 Sum_probs=75.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||++|+.+|..|++. +.+|+|+|+.+... |. ...++...+.+.+++.|++++.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~------g~~V~lv~~~~~~l--~~---------~~~~~~~~l~~~l~~~Gv~i~~~~ 229 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRL------GAEVIVLEYMDRIL--PT---------MDLEVSRAAERVFKKQGLTIRTGV 229 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSC--TT---------SCHHHHHHHHHHHHHHTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCEEEEEecCCccc--cc---------cCHHHHHHHHHHHHHCCCEEEECC
Confidence 47899999999999999999985 45999999987432 11 11234455666777789999986
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDV 207 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ 207 (513)
+|+.++.+++. ..+.++++.++++|.||+|+|.+|+...
T Consensus 230 ~V~~i~~~~~~-----------v~v~~~~g~~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 230 RVTAVVPEAKG-----------ARVELEGGEVLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp CEEEEEEETTE-----------EEEEETTSCEEEESEEEECSCEEECCTT
T ss_pred EEEEEEEeCCE-----------EEEEECCCeEEEcCEEEECcCCCcCCCC
Confidence 89998764431 1355667788999999999999887543
No 125
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.45 E-value=4.2e-07 Score=92.79 Aligned_cols=95 Identities=26% Similarity=0.345 Sum_probs=74.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+|+++.+...-.. ...++...+.+.+++.|++++.+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~----------~~~~~~~~l~~~l~~~GV~i~~~~ 208 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTA------GVHVSLVETQPRLMSRA----------APATLADFVARYHAAQGVDLRFER 208 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTTT----------SCHHHHHHHHHHHHHTTCEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCEEEEEEeCCcccccc----------cCHHHHHHHHHHHHHcCcEEEeCC
Confidence 57999999999999999999985 45999999987432110 11234456667777889999987
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPK 204 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~ 204 (513)
+|+.++ ++ .|.+++|+++++|.+|+|+|.+|+
T Consensus 209 ~v~~i~-~~--------------~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 209 SVTGSV-DG--------------VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp CEEEEE-TT--------------EEEETTSCEEECSEEEECSCEEEC
T ss_pred EEEEEE-CC--------------EEEECCCCEEEcCEEEECcCCCcc
Confidence 888886 22 367778889999999999999876
No 126
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.45 E-value=1.8e-07 Score=94.89 Aligned_cols=34 Identities=21% Similarity=0.398 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+++|+|||||++|+++|..|++. +++|+|||+.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~------G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA------GIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH------TCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCC
Confidence 46899999999999999999995 45999999976
No 127
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.44 E-value=2.5e-07 Score=98.46 Aligned_cols=109 Identities=20% Similarity=0.215 Sum_probs=67.3
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-----------------chhhh-----------
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-----------------MLYEL----------- 129 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-----------------~~~~~----------- 129 (513)
+.++|+|||||++|+++|..|++ .+++|+|||+.+.....+ .+..+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~------~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~ 121 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRA------GGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLP 121 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHH------TTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCce
Confidence 45799999999999999999999 456999999876221000 00000
Q ss_pred hhcc-------------------ccCCcchHhHHHHhcCCCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEec--CCc
Q 010331 130 LSGE-------------------VDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLL--ESG 187 (513)
Q Consensus 130 ~~g~-------------------~~~~~~~~~~~~~~~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~--~~g 187 (513)
..+. ++...+...+.+.+++.+++++.+ +|+++..++. .+ .|.+ .+|
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~------~v-----~v~~~~~~G 190 (570)
T 3fmw_A 122 FAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAE------AV-----EVTVAGPSG 190 (570)
T ss_dssp BTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSS------CE-----EEEEEETTE
T ss_pred eCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC------eE-----EEEEEeCCC
Confidence 0000 000112223344444568888876 8888865543 11 3444 677
Q ss_pred -eEEEecEEEEeCCCCC
Q 010331 188 -LIVEYDWLVLSLGAEP 203 (513)
Q Consensus 188 -~~i~yD~LVlAtGs~~ 203 (513)
.++++|+||.|.|...
T Consensus 191 ~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 191 PYPVRARYGVGCDGGRS 207 (570)
T ss_dssp EEEEEESEEEECSCSSC
T ss_pred cEEEEeCEEEEcCCCCc
Confidence 6899999999999764
No 128
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.43 E-value=3.4e-06 Score=88.82 Aligned_cols=39 Identities=23% Similarity=0.410 Sum_probs=33.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~ 123 (513)
+++|||||||+|||+||..|++. +++|+|+|+++.....
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~------G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS------GLNVVVLEARDRVGGR 42 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT------TCCEEEECSSSSSBTT
T ss_pred CceEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCc
Confidence 46899999999999999999984 5599999998865443
No 129
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.43 E-value=3.8e-07 Score=92.71 Aligned_cols=35 Identities=31% Similarity=0.501 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
.++|+|||||++|+++|..|++ .+++|+|+|+.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~------~G~~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRD------AGVDVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHh------CCCCEEEEecCCC
Confidence 4799999999999999999999 4569999999764
No 130
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.43 E-value=3.1e-07 Score=92.67 Aligned_cols=34 Identities=26% Similarity=0.465 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|||||||++|+++|+.|++. +++|+|||++.
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~------G~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKR------GEEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCC
Confidence 47999999999999999999994 55999999975
No 131
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.43 E-value=4e-07 Score=90.47 Aligned_cols=36 Identities=19% Similarity=0.313 Sum_probs=30.0
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+||+|||||++|+++|+.|++.. ..+++|+|+|+++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~---~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT---SGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC----CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc---cCCceEEEEECCC
Confidence 58999999999999999999811 1355999999975
No 132
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.42 E-value=6.8e-07 Score=93.84 Aligned_cols=40 Identities=28% Similarity=0.358 Sum_probs=34.1
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~ 122 (513)
+..||||||||++||+||++|++. .+++|+|+|+++....
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~-----~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQI-----DGPSWMIVDSNETPGG 48 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHH-----CCSCEEEEESSSSCCG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhh-----CCCCEEEEECCCCCcC
Confidence 457999999999999999999874 4569999999986543
No 133
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.41 E-value=1.8e-07 Score=93.95 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+++|||||||++|+++|+.|++. +++|+|||+++
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~------G~~V~vle~~~ 35 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA------GLNVLMTDAHM 35 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT------TCCEEEECSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC------CCeEEEEecCC
Confidence 47999999999999999999994 55999999875
No 134
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.41 E-value=8.6e-08 Score=103.09 Aligned_cols=37 Identities=27% Similarity=0.176 Sum_probs=32.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~ 121 (513)
.++|||||||+||+++|..|++ .+++|+|||+.+...
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~------~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVG------AGYKVAMFDIGEIDS 82 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCCCS
T ss_pred cCCEEEECCcHHHHHHHHHHHh------CCCcEEEEeccCCCC
Confidence 5799999999999999999998 455999999987544
No 135
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.41 E-value=3.6e-07 Score=93.35 Aligned_cols=100 Identities=25% Similarity=0.339 Sum_probs=76.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+++++.+.+. +... ..++...+.+.+++.|++++.+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtvv~~~~~~l-----~~~~-----~~~~~~~l~~~l~~~GV~i~~~~ 206 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKL------GLSVTILEAGDELL-----VRVL-----GRRIGAWLRGLLTELGVQVELGT 206 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSS-----HHHH-----CHHHHHHHHHHHHHHTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEecCCccc-----hhhc-----CHHHHHHHHHHHHHCCCEEEeCC
Confidence 57999999999999999999985 45999999987432 1111 1234456667777789999975
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~ 205 (513)
.|+.++.+++. ..|.+++|+++++|.+|+|+|.+|+.
T Consensus 207 ~v~~i~~~~~~-----------~~v~~~dg~~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 207 GVVGFSGEGQL-----------EQVMASDGRSFVADSALICVGAEPAD 243 (410)
T ss_dssp CEEEEECSSSC-----------CEEEETTSCEEECSEEEECSCEEECC
T ss_pred EEEEEeccCcE-----------EEEEECCCCEEEcCEEEEeeCCeecH
Confidence 88888765431 14778889899999999999998763
No 136
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.41 E-value=6.8e-07 Score=91.47 Aligned_cols=58 Identities=26% Similarity=0.233 Sum_probs=44.8
Q ss_pred ChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceE-EEecccccCCcceEEeeceE
Q 010331 262 TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI-LELQPAIKGLESQIFEADLV 340 (513)
Q Consensus 262 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~~~~~~~~g~~i~aD~v 340 (513)
...+.+.+.+.++++|++|++++.|++|..++ +++. +.+ +++++.||.|
T Consensus 195 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-----------------------~~~~gv~~-------~g~~~~ad~V 244 (425)
T 3ka7_A 195 CKGIIDALETVISANGGKIHTGQEVSKILIEN-----------------------GKAAGIIA-------DDRIHDADLV 244 (425)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-----------------------TEEEEEEE-------TTEEEECSEE
T ss_pred HHHHHHHHHHHHHHcCCEEEECCceeEEEEEC-----------------------CEEEEEEE-------CCEEEECCEE
Confidence 35566777888999999999999999998754 3333 432 4678999999
Q ss_pred EEecCCCCC
Q 010331 341 LWTVGSKPL 349 (513)
Q Consensus 341 i~a~G~~p~ 349 (513)
|+|+|....
T Consensus 245 V~a~~~~~~ 253 (425)
T 3ka7_A 245 ISNLGHAAT 253 (425)
T ss_dssp EECSCHHHH
T ss_pred EECCCHHHH
Confidence 999997643
No 137
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.40 E-value=5.3e-07 Score=98.20 Aligned_cols=34 Identities=32% Similarity=0.335 Sum_probs=30.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.+||||||||++|+++|+.|++. +.+|+|||+++
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~------G~~V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRR------GWQVTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCC
Confidence 47999999999999999999984 55999999954
No 138
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.39 E-value=3.5e-07 Score=92.93 Aligned_cols=36 Identities=31% Similarity=0.287 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHhhh-ccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLES-LVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~-~~~~~~~~~~V~lIe~~~ 118 (513)
+.++|||||||++|+++|+.|++ .+ ..+|+|||+++
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~G-----~~~V~vlE~~~ 56 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNHG-----ITNVAVLEKGW 56 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHC-----CCCEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhcC-----CCcEEEEeCCC
Confidence 35799999999999999999998 65 14999999976
No 139
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.38 E-value=5.7e-07 Score=92.54 Aligned_cols=34 Identities=29% Similarity=0.380 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~~ 118 (513)
.+||||||||++|+++|+.|++ .++ +|+|||+++
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~------~G~~~V~vlE~~~ 40 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR------RGYTNVTVLDPYP 40 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH------TTCCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHH------cCCCcEEEEeCCC
Confidence 5799999999999999999999 566 899999976
No 140
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.38 E-value=9.4e-07 Score=91.03 Aligned_cols=96 Identities=15% Similarity=0.297 Sum_probs=76.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..+.+++. +|+|+++.+.+. + ....++...+.+.+++.||+++.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~------~Vtlv~~~~~ll--~---------~~d~~~~~~~~~~l~~~gV~i~~~~ 209 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGL------HPTLIHRSDKIN--K---------LMDADMNQPILDELDKREIPYRLNE 209 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC------EEEEEESSSCCS--T---------TSCGGGGHHHHHHHHHTTCCEEESC
T ss_pred CcEEEEECCccchhhhHHHHHhcCC------cceeeeeecccc--c---------cccchhHHHHHHHhhccceEEEecc
Confidence 4689999999999999999999654 999999987432 1 112355667778888899999987
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.. .+.+++|+++++|.+++|+|.+|+..
T Consensus 210 ~v~~~~~~---------------~v~~~~g~~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 210 EINAINGN---------------EITFKSGKVEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp CEEEEETT---------------EEEETTSCEEECSEEEECCCEEESCG
T ss_pred EEEEecCC---------------eeeecCCeEEeeeeEEEEeceecCcH
Confidence 78777532 47788999999999999999988643
No 141
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.37 E-value=6.2e-07 Score=93.14 Aligned_cols=100 Identities=22% Similarity=0.306 Sum_probs=74.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|++. +.+|+|||+.+... +. ...++...+.+.+++.|++++.+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~gV~i~~~~ 231 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRL------GAEVTLIEYMPEIL--PQ---------GDPETAALLRRALEKEGIRVRTKT 231 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHTTCEEECSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCeEEEEEcCCccc--cc---------cCHHHHHHHHHHHHhcCCEEEcCC
Confidence 47999999999999999999985 45999999987432 11 11244555667777889999986
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecC-C--ce--EEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE-S--GL--IVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~-~--g~--~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.+++. + .+.++ + |+ ++++|.||+|+|.+|+..
T Consensus 232 ~v~~i~~~~~~------~-----~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 232 KAVGYEKKKDG------L-----HVRLEPAEGGEGEEVVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp EEEEEEEETTE------E-----EEEEEETTCCSCEEEEESEEEECSCEEESCT
T ss_pred EEEEEEEeCCE------E-----EEEEeecCCCceeEEEcCEEEECCCcccCCC
Confidence 88888754321 1 24443 4 65 899999999999988754
No 142
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.36 E-value=1.8e-07 Score=94.15 Aligned_cols=34 Identities=18% Similarity=0.387 Sum_probs=30.0
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.+++|||||||++|+++|++|++ | ++|+|||+++
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La~-G------~~V~vlE~~~ 41 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLSA-H------GRVVVLEREA 41 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-T------SCEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHhC-C------CCEEEEECCC
Confidence 35899999999999999999984 4 4999999975
No 143
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.36 E-value=4.7e-07 Score=91.43 Aligned_cols=34 Identities=24% Similarity=0.369 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
++||||||||++|+++|+.|++. +.+|+|||+.+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~------G~~V~vie~~~ 36 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ------GVKTLLVDAFD 36 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCC
Confidence 57999999999999999999994 55999999865
No 144
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.35 E-value=1.1e-06 Score=89.86 Aligned_cols=101 Identities=17% Similarity=0.285 Sum_probs=76.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+++++.+...... ...++...+.+.+++.|++++.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtvv~~~~~~l~~~----------~~~~~~~~l~~~l~~~GV~i~~~~ 215 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKF------GVNVTLLEALPRVLARV----------AGEALSEFYQAEHRAHGVDLRTGA 215 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT----------SCHHHHHHHHHHHHHTTCEEEETC
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCeEEEEecCCchhhhh----------cCHHHHHHHHHHHHhCCCEEEECC
Confidence 57999999999999999999985 45999999987442111 11244556667777889999976
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~ 205 (513)
.|+.+..++.. + ..|.+++|+++++|.+|+|+|.+|+.
T Consensus 216 ~v~~i~~~~~~------v----~~v~l~dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 216 AMDCIEGDGTK------V----TGVRMQDGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp CEEEEEESSSB------E----EEEEESSSCEEECSEEEECSCCEESC
T ss_pred EEEEEEecCCc------E----EEEEeCCCCEEEcCEEEECCCCccCh
Confidence 88888764320 0 13778889899999999999998864
No 145
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.35 E-value=2.6e-06 Score=88.59 Aligned_cols=38 Identities=34% Similarity=0.534 Sum_probs=33.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCC--eEEEEeCCCCccc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSERFVF 122 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~--~V~lIe~~~~~~~ 122 (513)
+++|||||||++||+||++|++ .+. +|+|+|+++....
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~------~G~~~~V~vlEa~~~~GG 41 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSR------APCPPKVVLVESSERLGG 41 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHT------SSSCCEEEEECSSSSSBT
T ss_pred CceEEEECCcHHHHHHHHHHHh------CCCCCcEEEEeCCCCCCC
Confidence 4799999999999999999998 455 9999999885543
No 146
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.35 E-value=6.7e-07 Score=89.90 Aligned_cols=92 Identities=30% Similarity=0.428 Sum_probs=72.4
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-e
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD-R 158 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~-~ 158 (513)
++|+|||||+.|+.+|..|++. +.+|+|+++.+...- + ..++...+.+.+++.|++++.+ +
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~---~---------~~~~~~~l~~~l~~~gV~i~~~~~ 205 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA------GYHVKLIHRGAMFLG---L---------DEELSNMIKDMLEETGVKFFLNSE 205 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT------TCEEEEECSSSCCTT---C---------CHHHHHHHHHHHHHTTEEEECSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCCeecc---C---------CHHHHHHHHHHHHHCCCEEEcCCE
Confidence 7899999999999999999985 459999999874321 1 1244556667777889999986 8
Q ss_pred EEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCC
Q 010331 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 159 V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~ 205 (513)
|+.++. . .|.+++|+ +++|.+|+|+|.+|+.
T Consensus 206 v~~i~~--~-------------~v~~~~g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 206 LLEANE--E-------------GVLTNSGF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp EEEECS--S-------------EEEETTEE-EECSCEEEECCEEECC
T ss_pred EEEEEe--e-------------EEEECCCE-EEcCEEEECcCCCcCH
Confidence 888852 1 36777887 9999999999998764
No 147
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.34 E-value=5.5e-07 Score=93.36 Aligned_cols=99 Identities=24% Similarity=0.369 Sum_probs=73.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|++.+ .+|+|+++.+... |. ...++...+.+.+++.|++++.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g------~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~gv~i~~~~ 233 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLG------AQVSVVEARERIL--PT---------YDSELTAPVAESLKKLGIALHLGH 233 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHT------CEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHHTCEEETTC
T ss_pred CCeEEEECcCHHHHHHHHHHHHCC------CeEEEEEcCCccc--cc---------cCHHHHHHHHHHHHHCCCEEEECC
Confidence 479999999999999999999864 4999999987432 11 11234455666777789999976
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCc--eEEEecEEEEeCCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVLSLGAEPKLDV 207 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g--~~i~yD~LVlAtGs~~~~~~ 207 (513)
+|+.++. ++. .+..++| .++++|.||+|+|.+|+...
T Consensus 234 ~v~~i~~-~~v------------~v~~~~G~~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 234 SVEGYEN-GCL------------LANDGKGGQLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp EEEEEET-TEE------------EEECSSSCCCEECCSCEEECCCEEECCSS
T ss_pred EEEEEEe-CCE------------EEEECCCceEEEECCEEEECcCCCcCCCC
Confidence 8888875 321 2333455 58999999999999987543
No 148
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.34 E-value=9.8e-07 Score=91.27 Aligned_cols=101 Identities=21% Similarity=0.285 Sum_probs=75.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|++. +.+|+|+|+.+... +. ...++...+.+.+++.|++++.+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~Gv~i~~~~ 229 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGL------GAKTHLFEMFDAPL--PS---------FDPMISETLVEVMNAEGPQLHTNA 229 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHHSCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCEEEEEEeCCchh--hh---------hhHHHHHHHHHHHHHCCCEEEeCC
Confidence 47999999999999999999985 45999999987432 11 11134455667777789999987
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.++.. . ..|.+++|+++++|.||+|+|.+|+..
T Consensus 230 ~v~~i~~~~~~-----~-----~~v~~~~g~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 230 IPKAVVKNTDG-----S-----LTLELEDGRSETVDCLIWAIGREPAND 268 (450)
T ss_dssp CEEEEEECTTS-----C-----EEEEETTSCEEEESEEEECSCEEESCT
T ss_pred EEEEEEEeCCc-----E-----EEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 88888754310 0 146777888899999999999988753
No 149
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.33 E-value=4.8e-07 Score=91.23 Aligned_cols=36 Identities=19% Similarity=0.364 Sum_probs=31.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
.+||+||||||||+++|..|++. +++|+|||+++..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~------G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKY------GLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCCCCC
Confidence 37999999999999999999994 5699999997643
No 150
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.32 E-value=1.5e-06 Score=90.95 Aligned_cols=101 Identities=17% Similarity=0.289 Sum_probs=75.0
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (513)
..++|+|||||+.|+.+|..|++. +.+|+|+++.+...-.. ...++...+.+.+++.||+++.+
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~~----------~~~~~~~~l~~~l~~~GV~i~~~ 256 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRK------GKEVVLIDVVDTCLAGY----------YDRDLTDLMAKNMEEHGIQLAFG 256 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT----------SCHHHHHHHHHHHHTTTCEEEET
T ss_pred CCceEEEECCCHHHHHHHHHHHHC------CCeEEEEEcccchhhhH----------HHHHHHHHHHHHHHhCCeEEEeC
Confidence 357999999999999999999985 44999999987432100 11244556677788899999987
Q ss_pred -eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCC
Q 010331 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 -~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.+.+. ..+.+ +++++++|.||+|+|.+|+..
T Consensus 257 ~~v~~i~~~~~v-----------~~v~~-~g~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 257 ETVKEVAGNGKV-----------EKIIT-DKNEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp CCEEEEECSSSC-----------CEEEE-SSCEEECSEEEECCCEEECCG
T ss_pred CEEEEEEcCCcE-----------EEEEE-CCcEEECCEEEECCCCCcChH
Confidence 89998754321 02444 567899999999999988754
No 151
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.32 E-value=6.6e-07 Score=94.70 Aligned_cols=35 Identities=31% Similarity=0.559 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+..+|+|||||++|+++|..|++. +++|+|||+.+
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~------G~~v~viEr~~ 38 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ------GVRVLVVERRP 38 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCC
Confidence 357999999999999999999984 56999999976
No 152
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.31 E-value=1.1e-06 Score=91.09 Aligned_cols=100 Identities=20% Similarity=0.330 Sum_probs=75.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|++. +.+|+|+++.+... +. . ..++...+.+.+++.|++++.+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~------G~~Vtlv~~~~~~l--~~--------~-~~~~~~~l~~~l~~~gv~i~~~~ 228 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSF------GSEVTVVALEDRLL--FQ--------F-DPLLSATLAENMHAQGIETHLEF 228 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSS--TT--------S-CHHHHHHHHHHHHHTTCEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCEEEEEEcCCccc--cc--------c-CHHHHHHHHHHHHHCCCEEEeCC
Confidence 46999999999999999999985 45999999987432 10 0 1133455667777889999986
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCce-EEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGL-IVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~-~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.++.. ..|.+++|+ ++++|.||+|+|.+|+..
T Consensus 229 ~v~~i~~~~~~-----------~~v~~~~G~~~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 229 AVAALERDAQG-----------TTLVAQDGTRLEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp CEEEEEEETTE-----------EEEEETTCCEEEEESEEEECSCEEESCT
T ss_pred EEEEEEEeCCe-----------EEEEEeCCcEEEEcCEEEECCCCCcCCC
Confidence 78888654320 147777887 899999999999988753
No 153
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.31 E-value=9.7e-07 Score=94.16 Aligned_cols=35 Identities=17% Similarity=0.384 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
..||||||||+||++||..|++. +.+|+|||+.+.
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~------G~~V~vlEk~~~ 160 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDS------GAKVILIEKEPV 160 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCC
Confidence 47999999999999999999984 559999999774
No 154
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.31 E-value=3.8e-06 Score=86.88 Aligned_cols=102 Identities=16% Similarity=0.151 Sum_probs=76.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++++|||||+.|+.+|..|.+.+ .+|+++++.+...... ...++...+.+.+++.|++++.+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g------~~Vtlv~~~~~~l~~~----------~d~~~~~~l~~~l~~~GV~i~~~~ 210 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMK------KTVHVFESLENLLPKY----------FDKEMVAEVQKSLEKQAVIFHFEE 210 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTT------CEEEEEESSSSSSTTT----------CCHHHHHHHHHHHHTTTEEEEETC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC------CeEEEEEccCcccccc----------CCHHHHHHHHHHHHHcCCEEEeCC
Confidence 478999999999999999999854 5999999987432110 11245566777888899999986
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVV 208 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~i 208 (513)
.|+.+...+.. + .|.++++ ++++|.+|+|+|.+|+....
T Consensus 211 ~v~~i~~~~~~------v-----~v~~~~g-~i~aD~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 211 TVLGIEETANG------I-----VLETSEQ-EISCDSGIFALNLHPQLAYL 249 (452)
T ss_dssp CEEEEEECSSC------E-----EEEESSC-EEEESEEEECSCCBCCCSSC
T ss_pred EEEEEEccCCe------E-----EEEECCC-EEEeCEEEECcCCCCChHHH
Confidence 88888743321 1 3666677 89999999999999875433
No 155
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.31 E-value=1.1e-06 Score=95.94 Aligned_cols=34 Identities=32% Similarity=0.350 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.+||||||||.+|+++|+.|++. +.+|+|||+++
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~------G~~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRR------GAVVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTT------TCCEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHC------CCcEEEEeCCC
Confidence 47999999999999999999984 55999999964
No 156
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.29 E-value=1.4e-06 Score=88.83 Aligned_cols=101 Identities=23% Similarity=0.350 Sum_probs=76.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+++++.+...... ...++...+.+.+++.|++++.+
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtvv~~~~~~~~~~----------~~~~~~~~l~~~l~~~GV~i~~~~ 205 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAK------GLEVDVVELAPRVMARV----------VTPEISSYFHDRHSGAGIRMHYGV 205 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSTTTTT----------SCHHHHHHHHHHHHHTTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCCcchhhc----------cCHHHHHHHHHHHHhCCcEEEECC
Confidence 47899999999999999999985 45999999987432111 11244556667777889999986
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~ 205 (513)
+|+.+..++.. + ..|.+++|+++++|.+|+|+|.+|+.
T Consensus 206 ~v~~i~~~~~~------v----~~V~~~dG~~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 206 RATEIAAEGDR------V----TGVVLSDGNTLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp CEEEEEEETTE------E----EEEEETTSCEEECSEEEECCCEEECC
T ss_pred EEEEEEecCCc------E----EEEEeCCCCEEEcCEEEECcCCccCH
Confidence 88888654320 0 13778889899999999999998763
No 157
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.29 E-value=1e-06 Score=92.33 Aligned_cols=110 Identities=15% Similarity=0.182 Sum_probs=67.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-----------------chhhhh---------
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-----------------MLYELL--------- 130 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-----------------~~~~~~--------- 130 (513)
.+.++|+|||||++|+++|..|++ .+++|+|||+.+.....+ +..++.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~------~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~ 82 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRL------AGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGH 82 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccc
Confidence 446799999999999999999999 456999999976321110 000000
Q ss_pred -hc-ccc--------C-------CcchHhHHHHhcCCCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCCce---E
Q 010331 131 -SG-EVD--------A-------WEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGL---I 189 (513)
Q Consensus 131 -~g-~~~--------~-------~~~~~~~~~~~~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~---~ 189 (513)
.+ ..+ + ..+..-+.+.+++.++++..+ +|+++..++. .+ +|.+.++. +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~------~v-----~v~~~~~~g~~~ 151 (500)
T 2qa1_A 83 FGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGA------GV-----TVEVRGPEGKHT 151 (500)
T ss_dssp ETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETT------EE-----EEEEEETTEEEE
T ss_pred ccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCC------eE-----EEEEEcCCCCEE
Confidence 00 000 0 011122334445568998876 8888865432 11 34444442 7
Q ss_pred EEecEEEEeCCCCC
Q 010331 190 VEYDWLVLSLGAEP 203 (513)
Q Consensus 190 i~yD~LVlAtGs~~ 203 (513)
+++|+||.|.|...
T Consensus 152 ~~a~~vVgADG~~S 165 (500)
T 2qa1_A 152 LRAAYLVGCDGGRS 165 (500)
T ss_dssp EEESEEEECCCTTC
T ss_pred EEeCEEEECCCcch
Confidence 89999999999864
No 158
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.29 E-value=1.5e-06 Score=89.98 Aligned_cols=100 Identities=17% Similarity=0.310 Sum_probs=73.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|++. +.+|+|+|+.+... |. ...++...+.+.+++.|++++.+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~gv~i~~~~ 232 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANF------GTKVTILEGAGEIL--SG---------FEKQMAAIIKKRLKKKGVEVVTNA 232 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSS--TT---------SCHHHHHHHHHHHHHTTCEEEESE
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCcEEEEEcCCccc--cc---------cCHHHHHHHHHHHHHCCCEEEeCC
Confidence 47999999999999999999985 45999999987432 11 11244555667777889999986
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecC---CceEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE---SGLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~---~g~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.++.. + .+.+. ++.++++|.+|+|+|.+|+..
T Consensus 233 ~v~~i~~~~~~------~-----~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 233 LAKGAEEREDG------V-----TVTYEANGETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp EEEEEEEETTE------E-----EEEEEETTEEEEEEESEEEECSCEEESCS
T ss_pred EEEEEEEeCCe------E-----EEEEEeCCceeEEEcCEEEECcCCCcccC
Confidence 88888654320 1 23332 456899999999999988754
No 159
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.29 E-value=1.3e-06 Score=91.64 Aligned_cols=110 Identities=17% Similarity=0.226 Sum_probs=68.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-----------------chhhhh---------
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-----------------MLYELL--------- 130 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-----------------~~~~~~--------- 130 (513)
.+..+|+|||||++|+++|..|++ .+++|+|||+.+.....+ +...+.
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~------~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~ 83 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRL------GGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGH 83 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccce
Confidence 346799999999999999999999 456999999976321110 000000
Q ss_pred -hc-ccc--------C-------CcchHhHHHHhcCCCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCCce---E
Q 010331 131 -SG-EVD--------A-------WEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGL---I 189 (513)
Q Consensus 131 -~g-~~~--------~-------~~~~~~~~~~~~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~---~ 189 (513)
.+ ..+ + ..+..-+.+.+.+.++++..+ +|+++..++. .+ +|.+.++. +
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~------~v-----~v~~~~~~g~~~ 152 (499)
T 2qa2_A 84 FGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGD------HV-----VVEVEGPDGPRS 152 (499)
T ss_dssp ETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSS------CE-----EEEEECSSCEEE
T ss_pred ecceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC------EE-----EEEEEcCCCcEE
Confidence 00 000 0 011222334445568998886 8888865543 11 34554543 7
Q ss_pred EEecEEEEeCCCCC
Q 010331 190 VEYDWLVLSLGAEP 203 (513)
Q Consensus 190 i~yD~LVlAtGs~~ 203 (513)
+++|+||.|.|...
T Consensus 153 ~~a~~vVgADG~~S 166 (499)
T 2qa2_A 153 LTTRYVVGCDGGRS 166 (499)
T ss_dssp EEEEEEEECCCTTC
T ss_pred EEeCEEEEccCccc
Confidence 99999999999864
No 160
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.28 E-value=2.2e-06 Score=89.62 Aligned_cols=104 Identities=19% Similarity=0.250 Sum_probs=77.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++++|||||+.|+.+|..|.++.. ++.+|+||++.+... +. ...++...+.+.+++.|++++.+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~---~g~~Vtlv~~~~~~l--~~---------~d~~~~~~l~~~l~~~GV~i~~~~ 252 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKA---RGGQVDLAYRGDMIL--RG---------FDSELRKQLTEQLRANGINVRTHE 252 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSC---TTCEEEEEESSSSSS--TT---------SCHHHHHHHHHHHHHTTEEEEETC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcc---CcCeEEEEEcCCCcc--cc---------cCHHHHHHHHHHHHhCCCEEEeCC
Confidence 4799999999999999999998611 255999999987432 11 11244556677777889999987
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.++.. . ..|.+++|+++++|.||+|+|.+|+..
T Consensus 253 ~v~~i~~~~~~-----~-----~~v~~~~G~~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 253 NPAKVTKNADG-----T-----RHVVFESGAEADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp CEEEEEECTTS-----C-----EEEEETTSCEEEESEEEECSCEEESCT
T ss_pred EEEEEEEcCCC-----E-----EEEEECCCcEEEcCEEEEccCCCcCcc
Confidence 88888754310 0 146777888899999999999988753
No 161
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.27 E-value=2.7e-06 Score=89.18 Aligned_cols=100 Identities=13% Similarity=0.198 Sum_probs=75.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|+++ +.+|+|+++.+... +. ...++...+.+.+++.|++++.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l--~~---------~d~~~~~~l~~~l~~~gv~i~~~~ 238 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRL------GIDSYIFARGNRIL--RK---------FDESVINVLENDMKKNNINIVTFA 238 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSSSSC--TT---------SCHHHHHHHHHHHHHTTCEEECSC
T ss_pred CCeEEEECChHHHHHHHHHHHHc------CCeEEEEecCCccC--cc---------cchhhHHHHHHHHHhCCCEEEECC
Confidence 57999999999999999999985 45999999977432 11 11234456667778889999987
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceE-EEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLI-VEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~-i~yD~LVlAtGs~~~~ 205 (513)
+|+.++.++.. . ..|.+++|++ +++|.||+|+|.+|+.
T Consensus 239 ~v~~i~~~~~~-----~-----~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 239 DVVEIKKVSDK-----N-----LSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp CEEEEEESSTT-----C-----EEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred EEEEEEEcCCc-----e-----EEEEECCCcEEEECCEEEECCCCCcCC
Confidence 78888754310 0 1466778877 9999999999999875
No 162
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.26 E-value=1.1e-06 Score=93.73 Aligned_cols=36 Identities=22% Similarity=0.456 Sum_probs=31.4
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
...||||||||+||+++|..|++. +.+|+|||+.+.
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~------G~~V~vlEk~~~ 155 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKA------GANVILVDKAPF 155 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHH------TCCEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCC
Confidence 346899999999999999999985 459999999773
No 163
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.26 E-value=1.7e-06 Score=88.96 Aligned_cols=100 Identities=23% Similarity=0.329 Sum_probs=73.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+++++.+...... ...++...+.+.+++.|++++.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~------G~~Vtlv~~~~~~l~~~----------~~~~~~~~l~~~l~~~GV~i~~~~ 212 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKA------NMHVTLLDTAARVLERV----------TAPPVSAFYEHLHREAGVDIRTGT 212 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSTTTTT----------SCHHHHHHHHHHHHHHTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCEEEEEEeCCccccch----------hhHHHHHHHHHHHHhCCeEEEeCC
Confidence 57999999999999999999985 44999999877432110 11234445566677789999987
Q ss_pred eEEEEeC--CCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCC
Q 010331 158 RVKLLCP--SDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPK 204 (513)
Q Consensus 158 ~V~~id~--~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~ 204 (513)
+|+.++. ++.. + ..|.+++|+++++|.||+|+|.+|+
T Consensus 213 ~v~~i~~~~~~~~------v----~~v~~~~G~~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 213 QVCGFEMSTDQQK------V----TAVLCEDGTRLPADLVIAGIGLIPN 251 (431)
T ss_dssp CEEEEEECTTTCC------E----EEEEETTSCEEECSEEEECCCEEEC
T ss_pred EEEEEEeccCCCc------E----EEEEeCCCCEEEcCEEEECCCCCcC
Confidence 8888875 2210 0 1366778889999999999998875
No 164
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.26 E-value=2.4e-06 Score=89.50 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=76.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+.. .++.+|+||++.+... +. ...++...+.+.+++.||+++.+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~---~~g~~Vtlv~~~~~~l--~~---------~d~~~~~~l~~~l~~~GV~i~~~~ 256 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYK---PPGGKVTLCYRNNLIL--RG---------FDETIREEVTKQLTANGIEIMTNE 256 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHC---CTTCEEEEEESSSSSC--TT---------SCHHHHHHHHHHHHHTTCEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhC---CCCCeEEEEEcCCccc--cc---------cCHHHHHHHHHHHHhCCCEEEeCC
Confidence 479999999999999999999861 0255999999987432 11 11234556667777889999987
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~ 205 (513)
+|+.++.++.. . ..|.+++|+++++|.||+|+|.+|+.
T Consensus 257 ~v~~i~~~~~~-----~-----~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 257 NPAKVSLNTDG-----S-----KHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp CEEEEEECTTS-----C-----EEEEETTSCEEEESEEEECSCEEECC
T ss_pred EEEEEEEcCCc-----e-----EEEEECCCcEEEcCEEEECCCCcccc
Confidence 88888754310 0 14677788889999999999998875
No 165
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.25 E-value=1e-06 Score=91.28 Aligned_cols=35 Identities=37% Similarity=0.618 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
.++|+|||||+||+++|..|++ .+++|+|||+.+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~------~G~~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSR------RGLKILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSS------SSCCEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCCC
Confidence 4799999999999999999998 4569999999764
No 166
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.25 E-value=9.9e-07 Score=89.47 Aligned_cols=34 Identities=26% Similarity=0.447 Sum_probs=30.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..||||||||++|+++|+.|++. +.+|+|||+.+
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~------G~~V~vlE~~~ 37 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAER------GHRVLVLERHT 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCC
Confidence 36999999999999999999994 55999999875
No 167
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.25 E-value=1.6e-06 Score=91.17 Aligned_cols=37 Identities=30% Similarity=0.413 Sum_probs=29.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|||||||++|+++|..|++... .+++|+|||+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~---~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFD---DRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHG---GGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcC---CCCEEEEEecCC
Confidence 4799999999999999999998210 234999999865
No 168
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.25 E-value=2.4e-06 Score=86.65 Aligned_cols=34 Identities=24% Similarity=0.387 Sum_probs=30.4
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
.||+|||||++|+++|..|++. +++|+|+|+.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~------G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH------GIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCEEEEecCCC
Confidence 4899999999999999999994 569999998764
No 169
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.25 E-value=1.2e-06 Score=91.45 Aligned_cols=99 Identities=15% Similarity=0.195 Sum_probs=74.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|++.+ .+|+|||+.+... +. ...++...+.+.+++.||+++.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G------~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~gV~i~~~~ 247 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLG------SRLDVVEMMDGLM--QG---------ADRDLVKVWQKQNEYRFDNIMVNT 247 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHT------CEEEEECSSSSSS--TT---------SCHHHHHHHHHHHGGGEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcC------CeEEEEEECCccc--cc---------cCHHHHHHHHHHHHhcCCEEEECC
Confidence 579999999999999999999864 4999999987432 11 11244556677788889999986
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCC----ceEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLES----GLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~----g~~i~yD~LVlAtGs~~~~ 205 (513)
+|+.++.+++. ..+.+++ |+++++|.+|+|+|.+|+.
T Consensus 248 ~v~~i~~~~~~-----------~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 248 KTVAVEPKEDG-----------VYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp EEEEEEEETTE-----------EEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred EEEEEEEcCCe-----------EEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 88888654320 1345544 6678999999999998875
No 170
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.25 E-value=2e-06 Score=89.69 Aligned_cols=100 Identities=21% Similarity=0.328 Sum_probs=73.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|++. +.+|+||++.+... +.+ ..++...+.+.+++.|++++.+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l--~~~---------~~~~~~~l~~~l~~~gv~i~~~~ 245 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRL------GSKVTVVEFQPQIG--ASM---------DGEVAKATQKFLKKQGLDFKLST 245 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSS--SSS---------CHHHHHHHHHHHHHTTCEEECSE
T ss_pred CceEEEECCCHHHHHHHHHHHHc------CCEEEEEEeCCccc--ccc---------CHHHHHHHHHHHHHCCCEEEeCC
Confidence 47999999999999999999985 45999999987432 111 1244556667777889999986
Q ss_pred eEEEEeC--CCCcCcCCCceeeccceEecC-----CceEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCP--SDHLGVNGPMACTHGGTVLLE-----SGLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~--~~~~~~~~~~v~~~~~~v~~~-----~g~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++. +.+. + .+.+. +++++++|.||+|+|.+|+..
T Consensus 246 ~v~~i~~~~~~~~------~-----~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 246 KVISAKRNDDKNV------V-----EIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EEEEEEEETTTTE------E-----EEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred EEEEEEEecCCCe------E-----EEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 8888875 3321 1 23333 456899999999999988754
No 171
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.25 E-value=1.4e-06 Score=93.17 Aligned_cols=43 Identities=33% Similarity=0.514 Sum_probs=33.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
.+.+||||||||+||+++|..|++......++++|+|||+.+.
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~ 75 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH 75 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCC
Confidence 3458999999999999999999985100001569999999764
No 172
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.24 E-value=3.2e-06 Score=87.93 Aligned_cols=102 Identities=18% Similarity=0.193 Sum_probs=74.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+|+++.+...-. . ...++...+.+.+++.|++++.+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~-~---------~~~~~~~~l~~~l~~~Gv~i~~~~ 241 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRL------GADVTAVEFLGHVGGV-G---------IDMEISKNFQRILQKQGFKFKLNT 241 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSCS-S---------CCHHHHHHHHHHHHHTTCEEECSE
T ss_pred CceEEEECCCHHHHHHHHHHHHc------CCEEEEEeccCccCCc-c---------cCHHHHHHHHHHHHHCCCEEEeCc
Confidence 47999999999999999999985 4599999998743210 0 11234456667777889999976
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEe-----cCCceEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVL-----LESGLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~-----~~~g~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.++.. .+ .+. ..++.++++|.||+|+|.+|+..
T Consensus 242 ~v~~i~~~~~~-----~~-----~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 242 KVTGATKKSDG-----KI-----DVSIEAASGGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp EEEEEEECTTS-----CE-----EEEEEETTSCCCEEEEESEEEECSCEEECCT
T ss_pred eEEEEEEcCCc-----eE-----EEEEEecCCCCceEEEcCEEEECcCCCcCCC
Confidence 88888765420 01 233 34567899999999999988754
No 173
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.24 E-value=2.4e-06 Score=82.57 Aligned_cols=88 Identities=17% Similarity=0.158 Sum_probs=70.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEEe
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (513)
.++|+|||+|+.|+.+|..|.+ .+ +|+++++.+. .+...+.+.+++.+++++..+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~------~g-~v~~v~~~~~------------------~~~~~~~~~l~~~gv~i~~~~ 195 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPD------WG-ETTFFTNGIV------------------EPDADQHALLAARGVRVETTR 195 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGG------TS-EEEEECTTTC------------------CCCHHHHHHHHHTTCEEECSC
T ss_pred CCEEEEEecCccHHHHHHHhhh------cC-cEEEEECCCC------------------CCCHHHHHHHHHCCcEEEcce
Confidence 4789999999999999999998 34 9999988763 223345567778899998778
Q ss_pred EEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCC
Q 010331 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 159 V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~ 205 (513)
|+.++.++ .|.+++|+++++|.+|+|+|..|+.
T Consensus 196 v~~i~~~~--------------~v~~~~g~~~~~D~vi~a~G~~p~~ 228 (297)
T 3fbs_A 196 IREIAGHA--------------DVVLADGRSIALAGLFTQPKLRITV 228 (297)
T ss_dssp EEEEETTE--------------EEEETTSCEEEESEEEECCEEECCC
T ss_pred eeeeecCC--------------eEEeCCCCEEEEEEEEEccCcccCc
Confidence 88886542 3777888899999999999988753
No 174
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.24 E-value=1.9e-06 Score=89.78 Aligned_cols=101 Identities=17% Similarity=0.211 Sum_probs=75.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+.+ .+|+++++.+... +. ...++...+.+.+++.|++++.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g------~~Vtlv~~~~~~l--~~---------~d~~~~~~l~~~l~~~Gv~i~~~~ 247 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLG------SETHLVIRGETVL--RK---------FDECIQNTITDHYVKEGINVHKLS 247 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTT------CEEEEECSSSSSC--TT---------SCHHHHHHHHHHHHHHTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcC------CceEEEEeCCccc--cc---------cCHHHHHHHHHHHHhCCeEEEeCC
Confidence 479999999999999999999854 4999999987432 11 11234455667777789999987
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCc-eEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESG-LIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g-~~i~yD~LVlAtGs~~~~ 205 (513)
+|+.++.++.. .. ..|.+++| +++++|.+|+|+|.+|+.
T Consensus 248 ~v~~i~~~~~~----~~-----~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 248 KIVKVEKNVET----DK-----LKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp CEEEEEECC-C----CC-----EEEEETTSCEEEEESEEEECSCEEECC
T ss_pred EEEEEEEcCCC----cE-----EEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 88888754210 00 14677788 789999999999998875
No 175
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.23 E-value=2.2e-06 Score=89.11 Aligned_cols=100 Identities=18% Similarity=0.260 Sum_probs=75.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhc-cccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESL-VWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~-~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (513)
.++|+|||||+.|+.+|..|.+. + .+|+++++.+...... ...++...+.+.+++.|++++.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g------~~Vtlv~~~~~~l~~~----------~~~~~~~~l~~~l~~~GV~i~~~ 222 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWG------IDTTVVELADQIMPGF----------TSKSLSQMLRHDLEKNDVVVHTG 222 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHC------CEEEEECSSSSSSTTT----------SCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcC------CcEEEEEccCcccccc----------cCHHHHHHHHHHHHhcCCEEEeC
Confidence 47999999999999999999985 4 4999999977332101 11244556677777889999987
Q ss_pred -eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCC
Q 010331 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 -~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~ 205 (513)
+|+.++.++.. ..+.+++|+++++|.+|+|+|.+|+.
T Consensus 223 ~~v~~i~~~~~~-----------v~v~~~~g~~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 223 EKVVRLEGENGK-----------VARVITDKRTLDADLVILAAGVSPNT 260 (472)
T ss_dssp CCEEEEEESSSB-----------EEEEEESSCEEECSEEEECSCEEECC
T ss_pred CEEEEEEccCCe-----------EEEEEeCCCEEEcCEEEECCCCCcCH
Confidence 89998763321 13566778899999999999998763
No 176
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.23 E-value=2.5e-06 Score=88.17 Aligned_cols=101 Identities=25% Similarity=0.289 Sum_probs=73.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|++. +.+|+|+++.+...... ...++...+.+.+++.|++++.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~----------~~~~~~~~l~~~l~~~Gv~i~~~~ 212 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQ------NYNVNLIDGHERVLYKY----------FDKEFTDILAKDYEAHGVNLVLGS 212 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSTTTTT----------SCHHHHHHHHHHHHHTTCEEEESS
T ss_pred CCeEEEECcCHHHHHHHHHHHhc------CCEEEEEEcCCchhhhh----------hhhhHHHHHHHHHHHCCCEEEcCC
Confidence 47899999999999999999985 45999999987432100 11234556677788889999987
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.++. .+ ..+.+ +|+++++|.||+|+|.+|+..
T Consensus 213 ~v~~i~~~~~------~v----~~v~~-~g~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 213 KVAAFEEVDD------EI----ITKTL-DGKEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp CEEEEEEETT------EE----EEEET-TSCEEEESEEEECCCEEECCG
T ss_pred eeEEEEcCCC------eE----EEEEe-CCCEEECCEEEECcCCCCCHH
Confidence 8888865221 01 01344 667899999999999988754
No 177
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.23 E-value=3.1e-06 Score=89.54 Aligned_cols=37 Identities=24% Similarity=0.424 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|||||||++|+++|..|++... .+++|+|||+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~---~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ---QQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC---SSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC---CCCEEEEECCCC
Confidence 4799999999999999999998210 345999999965
No 178
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.22 E-value=1.7e-06 Score=90.48 Aligned_cols=104 Identities=23% Similarity=0.214 Sum_probs=75.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|||||||+.|+.+|..|.+.+. ..+.+|+++++.+...... -+.++...+.+.+++.||+++.+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~--~~g~~V~~v~~~~~~~~~~----------l~~~~~~~~~~~l~~~GV~v~~~~ 247 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKAR--ALGTEVIQLFPEKGNMGKI----------LPEYLSNWTMEKVRREGVKVMPNA 247 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHH--HHTCEEEEECSSSSTTTTT----------SCHHHHHHHHHHHHTTTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhh--hcCCEEEEEecCccccccc----------CCHHHHHHHHHHHHhcCCEEEeCC
Confidence 4799999999999999999987532 1256999999876321110 11234455667788899999987
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~ 205 (513)
.|+.++.++.. ..|.+.+|+++++|.+|+|+|.+|+.
T Consensus 248 ~V~~i~~~~~~-----------~~v~l~dG~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 248 IVQSVGVSSGK-----------LLIKLKDGRKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp CEEEEEEETTE-----------EEEEETTSCEEEESEEEECCCEEECC
T ss_pred EEEEEEecCCe-----------EEEEECCCCEEECCEEEECCCCCccH
Confidence 88888653320 13677888899999999999998864
No 179
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.20 E-value=9.2e-07 Score=83.64 Aligned_cols=37 Identities=35% Similarity=0.409 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
|..+|+|||||||||+||..|++. +++|+|||+++..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~------G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAA------GHQVHLFDKSRGS 37 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCC
Confidence 457899999999999999999994 5699999998754
No 180
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.19 E-value=2.6e-06 Score=91.21 Aligned_cols=97 Identities=25% Similarity=0.400 Sum_probs=75.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+++++.+..... ...++...+.+.+++.|++++.+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~~~l~~~GV~i~~~~ 249 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRER------GIEVTLVEMANQVMPP-----------IDYEMAAYVHEHMKNHDVELVFED 249 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT-----------SCHHHHHHHHHHHHHTTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEecCCccccc-----------CCHHHHHHHHHHHHHcCCEEEECC
Confidence 47899999999999999999985 4499999987733211 11234556667778889999985
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~ 205 (513)
.|+.++.+.. .|.+.+|+++++|.||+|+|.+|+.
T Consensus 250 ~v~~i~~~~~-------------~v~~~~g~~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 250 GVDALEENGA-------------VVRLKSGSVIQTDMLILAIGVQPES 284 (588)
T ss_dssp CEEEEEGGGT-------------EEEETTSCEEECSEEEECSCEEECC
T ss_pred eEEEEecCCC-------------EEEECCCCEEEcCEEEEccCCCCCh
Confidence 8888865432 4777788899999999999988764
No 181
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.18 E-value=1.7e-06 Score=88.21 Aligned_cols=35 Identities=37% Similarity=0.471 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCe-EEEEeCCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQ-VLLVDQSER 119 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~-V~lIe~~~~ 119 (513)
.++|+|||||++|+++|..|++. +++ |+|||+.+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~------G~~~v~v~E~~~~ 39 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA------GIGKVTLLESSSE 39 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCCC
Confidence 47999999999999999999994 558 999999764
No 182
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.18 E-value=3.4e-06 Score=88.90 Aligned_cols=102 Identities=14% Similarity=0.247 Sum_probs=75.5
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-e
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD-R 158 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~-~ 158 (513)
++|+|||||+.|+.+|..|.+. +.+|+++++.+... +. ...++...+.+.+++.|++++.+ +
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~------G~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~GV~i~~~~~ 277 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT------GRRTVMLVRTEPLK--LI---------KDNETRAYVLDRMKEQGMEIISGSN 277 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTTT--TC---------CSHHHHHHHHHHHHHTTCEEESSCE
T ss_pred CeEEEECCCHHHHHHHHHHHHc------CCeEEEEEecCccc--cc---------ccHHHHHHHHHHHHhCCcEEEECCE
Confidence 7999999999999999999985 45999999987432 11 12244556677777889999976 8
Q ss_pred EEEEeCCCCcCcCCCceeeccceEecCCce-EEEecEEEEeCCCCCCC
Q 010331 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGL-IVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 159 V~~id~~~~~~~~~~~v~~~~~~v~~~~g~-~i~yD~LVlAtGs~~~~ 205 (513)
|+.+..++.. .+ .+..|.+++|+ ++++|.||+|+|.+|+.
T Consensus 278 V~~i~~~~~~-----~v--~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 278 VTRIEEDANG-----RV--QAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp EEEEEECTTS-----BE--EEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred EEEEEEcCCC-----ce--EEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 8888753220 00 00146777887 89999999999998864
No 183
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.18 E-value=1.3e-06 Score=88.99 Aligned_cols=36 Identities=28% Similarity=0.379 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|||||||++|+++|+.|++. .++++|+|||++.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~----~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQL----APGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhc----CCCCeEEEEeCCC
Confidence 47999999999999999999985 1256999999865
No 184
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.17 E-value=2.2e-06 Score=89.41 Aligned_cols=100 Identities=19% Similarity=0.299 Sum_probs=73.3
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (513)
..++|+|||||+.|+.+|..|.+. +.+|+|+++.+... +. ...++...+.+.+++.|++++.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~Gv~i~~~ 247 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVEL------GKKVRMIERNDHIG--TI---------YDGDMAEYIYKEADKHHIEILTN 247 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHT------TCEEEEECCGGGTT--SS---------SCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc------CCeEEEEEeCCchh--hc---------CCHHHHHHHHHHHHHcCcEEEcC
Confidence 457999999999999999999985 45999999976321 10 11244556667777889999976
Q ss_pred -eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCC
Q 010331 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 -~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.+.+. ..+.+++ .++++|.||+|+|.+|+..
T Consensus 248 ~~v~~i~~~~~v-----------~~v~~~~-~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 248 ENVKAFKGNERV-----------EAVETDK-GTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp CCEEEEEESSBE-----------EEEEETT-EEEECSEEEECSCEEESCG
T ss_pred CEEEEEEcCCcE-----------EEEEECC-CEEEcCEEEECcCCCcChH
Confidence 88888654321 1244544 4899999999999988643
No 185
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.17 E-value=5.4e-06 Score=85.60 Aligned_cols=98 Identities=15% Similarity=0.258 Sum_probs=71.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+++++.+.+.... ...++...+.+.+++. ++++.+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~----------~~~~~~~~l~~~l~~~-v~i~~~~ 210 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQ------GKNVTMIVRGERVLRRS----------FDKEVTDILEEKLKKH-VNLRLQE 210 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT----------SCHHHHHHHHHHHTTT-SEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEEcCCccchhh----------cCHHHHHHHHHHHHhC-cEEEeCC
Confidence 46999999999999999999985 45999999987432110 1124455666777777 999876
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~ 205 (513)
.|..++.+.+. .....++.++++|.+|+|+|.+|+.
T Consensus 211 ~v~~i~~~~~v------------~~v~~~g~~i~~D~Vv~a~G~~p~~ 246 (449)
T 3kd9_A 211 ITMKIEGEERV------------EKVVTDAGEYKAELVILATGIKPNI 246 (449)
T ss_dssp CEEEEECSSSC------------CEEEETTEEEECSEEEECSCEEECC
T ss_pred eEEEEeccCcE------------EEEEeCCCEEECCEEEEeeCCccCH
Confidence 78888755431 1223356689999999999988763
No 186
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.17 E-value=3.5e-06 Score=88.85 Aligned_cols=100 Identities=19% Similarity=0.162 Sum_probs=76.1
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (513)
.+++++|||||+.|+..|..++++|. +|||+++...+ |. ...++...+.+.+++.+++++.+
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~------~VTii~~~~~L---~~---------~D~ei~~~l~~~l~~~gi~~~~~ 283 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGY------DVTVAVRSIVL---RG---------FDQQCAVKVKLYMEEQGVMFKNG 283 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTC------CEEEEESSCSS---TT---------SCHHHHHHHHHHHHHTTCEEEET
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCC------eEEEecccccc---cc---------cchhHHHHHHHHHHhhcceeecc
Confidence 35789999999999999999999765 99999875411 11 12256667778888899999987
Q ss_pred -eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCC
Q 010331 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 -~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~ 206 (513)
.++.+...+.. ..|.+.++.++.+|.|++|+|-+|+..
T Consensus 284 ~~v~~~~~~~~~-----------~~v~~~~~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 284 ILPKKLTKMDDK-----------ILVEFSDKTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp CCEEEEEEETTE-----------EEEEETTSCEEEESEEEECSCEEESCG
T ss_pred eEEEEEEecCCe-----------EEEEEcCCCeEEEEEEEEcccccCCcc
Confidence 77777654331 146677777899999999999988754
No 187
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.17 E-value=4.5e-06 Score=88.83 Aligned_cols=110 Identities=20% Similarity=0.288 Sum_probs=73.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+++++.+... +. ...++...+.+.+++.|++++.+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~GV~i~~~~ 213 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHL------GIKTTLLELADQVM--TP---------VDREMAGFAHQAIRDQGVDLRLGT 213 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSC--TT---------SCHHHHHHHHHHHHHTTCEEEETC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCcEEEEEcCCccc--hh---------cCHHHHHHHHHHHHHCCCEEEeCC
Confidence 46999999999999999999985 45999999987322 11 11234455666777889999986
Q ss_pred eEEEEeCCCCcCc----CC--Cce--eeccceEecCCceEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGV----NG--PMA--CTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~----~~--~~v--~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~ 205 (513)
+|+.+..+..... .. ... ......+.+.+|+++++|.+|+|+|.+|+.
T Consensus 214 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 214 ALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPET 269 (565)
T ss_dssp CEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred eEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccch
Confidence 8888865210000 00 000 000013566788899999999999988763
No 188
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.14 E-value=5.2e-06 Score=86.21 Aligned_cols=100 Identities=21% Similarity=0.304 Sum_probs=73.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHh-cCCCeEEEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLL-ANTGVQFFKD 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~-~~~~v~~~~~ 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+|+++.+.+. |. ...++...+.+.+ ++.|++++.+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l--~~---------~d~~~~~~l~~~l~~~~gv~i~~~ 236 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARL------GAEVTVVEFAPRCA--PT---------LDEDVTNALVGALAKNEKMKFMTS 236 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHHTCCEEECS
T ss_pred CceEEEECCCHHHHHHHHHHHHh------CCEEEEEecCCccc--cc---------CCHHHHHHHHHHHhhcCCcEEEeC
Confidence 47999999999999999999985 44999999987432 11 1123455667777 7889999986
Q ss_pred -eEEEEeCCCCcCcCCCceeeccceEecC--Cc--eEEEecEEEEeCCCCCCCC
Q 010331 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLE--SG--LIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 -~V~~id~~~~~~~~~~~v~~~~~~v~~~--~g--~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.++.. + .+.++ +| +++++|.||+|+|.+|+..
T Consensus 237 ~~v~~i~~~~~~------~-----~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 237 TKVVGGTNNGDS------V-----SLEVEGKNGKRETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp CEEEEEEECSSS------E-----EEEEECC---EEEEEESEEEECSCEEECCT
T ss_pred CEEEEEEEcCCe------E-----EEEEEcCCCceEEEECCEEEECCCcccCCC
Confidence 88888765421 1 23433 55 6899999999999988754
No 189
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.13 E-value=4.1e-06 Score=86.92 Aligned_cols=100 Identities=18% Similarity=0.300 Sum_probs=73.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+.+ .+|+|+++.+.+. |. ...++...+.+.+++.|++++.+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g------~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~gv~i~~~~ 233 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYG------VDVTIVEFLPRAL--PN---------EDADVSKEIEKQFKKLGVTILTAT 233 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTT------CEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHHTCEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHHcC------CeEEEEEcCCccc--cc---------cCHHHHHHHHHHHHHcCCEEEeCc
Confidence 479999999999999999999854 4999999987432 11 11234455667777789999986
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecC-Cc--eEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE-SG--LIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~-~g--~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.++.. + .+.+. +| +++++|.+|+|+|.+|+..
T Consensus 234 ~v~~i~~~~~~------~-----~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 274 (464)
T 2a8x_A 234 KVESIADGGSQ------V-----TVTVTKDGVAQELKAEKVLQAIGFAPNVE 274 (464)
T ss_dssp EEEEEEECSSC------E-----EEEEESSSCEEEEEESEEEECSCEEECCS
T ss_pred EEEEEEEcCCe------E-----EEEEEcCCceEEEEcCEEEECCCCCccCC
Confidence 88888754321 1 23432 45 6899999999999988754
No 190
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.12 E-value=3.8e-06 Score=87.25 Aligned_cols=98 Identities=14% Similarity=0.189 Sum_probs=73.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+++++.+.+. | + ..++...+.+.+++.|++++.+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l--~-~---------~~~~~~~l~~~l~~~Gv~i~~~~ 237 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARL------GSKVTVLARNTLFF--R-E---------DPAIGEAVTAAFRAEGIEVLEHT 237 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTTT--T-S---------CHHHHHHHHHHHHHTTCEEETTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCEEEEEEECCccC--C-C---------CHHHHHHHHHHHHhCCCEEEcCC
Confidence 47999999999999999999985 44999999987332 1 1 1234556677777889999975
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.++.. ..|.+++ .++++|.||+|+|..|+..
T Consensus 238 ~v~~i~~~~~~-----------~~v~~~~-~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 238 QASQVAHMDGE-----------FVLTTTH-GELRADKLLVATGRTPNTR 274 (467)
T ss_dssp CEEEEEEETTE-----------EEEEETT-EEEEESEEEECSCEEESCT
T ss_pred EEEEEEEeCCE-----------EEEEECC-cEEEcCEEEECCCCCcCCC
Confidence 88888654321 1355554 4899999999999988743
No 191
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.12 E-value=3.5e-06 Score=87.54 Aligned_cols=100 Identities=24% Similarity=0.354 Sum_probs=73.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+.+ .+|+|+++.+... |. ...++...+.+.+++.|++++.+
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g------~~Vtli~~~~~~l--~~---------~~~~~~~~l~~~l~~~gv~i~~~~ 239 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIG------SEVTVVEFASEIV--PT---------MDAEIRKQFQRSLEKQGMKFKLKT 239 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHT------CEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHSSCCEECSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcC------CcEEEEEcCCccc--cc---------ccHHHHHHHHHHHHHcCCEEEeCC
Confidence 479999999999999999999864 4999999987432 11 11234455667777889999976
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecC---Cc--eEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE---SG--LIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~---~g--~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.++.. + .+.+. +| .++++|.+|+|+|.+|+..
T Consensus 240 ~v~~i~~~~~~------~-----~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 282 (470)
T 1dxl_A 240 KVVGVDTSGDG------V-----KLTVEPSAGGEQTIIEADVVLVSAGRTPFTS 282 (470)
T ss_dssp EEEEEECSSSS------E-----EEEEEESSSCCCEEEEESEEECCCCEEECCT
T ss_pred EEEEEEEcCCe------E-----EEEEEecCCCcceEEECCEEEECCCCCcCCC
Confidence 89999765421 1 23332 33 6899999999999988754
No 192
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.12 E-value=4.1e-06 Score=87.77 Aligned_cols=100 Identities=20% Similarity=0.330 Sum_probs=76.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+++++.+... +. ...++...+.+.+++.|++++.+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l--~~---------~d~~~~~~l~~~l~~~GV~i~~~~ 244 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTEL------GVPVTVVASQDHVL--PY---------EDADAALVLEESFAERGVRLFKNA 244 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHT------TCCEEEECSSSSSS--CC---------SSHHHHHHHHHHHHHTTCEEETTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEcCCccc--cc---------cCHHHHHHHHHHHHHCCCEEEeCC
Confidence 47899999999999999999985 44999999987432 11 11244556677788889999976
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.+..+... + .+.+.+|+++++|.+|+|+|.+|+..
T Consensus 245 ~V~~i~~~~~~------v-----~v~~~~g~~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 245 RAASVTRTGAG------V-----LVTMTDGRTVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp CEEEEEECSSS------E-----EEEETTSCEEEESEEEECCCEEECCS
T ss_pred EEEEEEEeCCE------E-----EEEECCCcEEEcCEEEECCCCCcCCC
Confidence 88888755421 1 35567788899999999999988753
No 193
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.11 E-value=7.1e-06 Score=80.79 Aligned_cols=37 Identities=27% Similarity=0.418 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
.+||+|||||++|+++|..|++. .++++|+|||+++.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~----~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTL----RPDLRITIVEAGVA 115 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH----CTTSCEEEEESSSS
T ss_pred cCCEEEECccHHHHHHHHHHHhc----CCCCEEEEEeCCCc
Confidence 47999999999999999999984 13669999999864
No 194
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.10 E-value=9.2e-06 Score=84.52 Aligned_cols=100 Identities=20% Similarity=0.322 Sum_probs=74.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+.+ .+|+++++.+.+. +. ...++...+.+.+++.|++++.+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g------~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~Gv~v~~~~ 242 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLG------AEVTVLEAMDKFL--PA---------VDEQVAKEAQKILTKQGLKILLGA 242 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTT------CEEEEEESSSSSS--TT---------SCHHHHHHHHHHHHHTTEEEEETC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcC------CcEEEEecCCCcC--cc---------cCHHHHHHHHHHHHhCCCEEEECC
Confidence 578999999999999999999854 4999999987432 11 11245566677788889999986
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCC--c-eEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLES--G-LIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~--g-~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.+++. ..+.+.+ | +++++|.+|+|+|.+|+..
T Consensus 243 ~v~~i~~~~~~-----------~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 243 RVTGTEVKNKQ-----------VTVKFVDAEGEKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp EEEEEEECSSC-----------EEEEEESSSEEEEEEESEEEECSCEEECCT
T ss_pred EEEEEEEcCCE-----------EEEEEEeCCCcEEEECCEEEEeeCCcccCC
Confidence 88888755431 1244433 3 6799999999999988754
No 195
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.10 E-value=5.6e-06 Score=86.41 Aligned_cols=100 Identities=19% Similarity=0.333 Sum_probs=76.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+++++.+.+. +. ...++...+.+.+++.|++++.+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vtli~~~~~~l--~~---------~~~~~~~~l~~~l~~~Gv~i~~~~ 253 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGL------GVKTTLLHRGDLIL--RN---------FDYDLRQLLNDAMVAKGISIIYEA 253 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHHTCEEESSC
T ss_pred CCcEEEECcCHHHHHHHHHHHHc------CCeEEEEECCCccc--cc---------cCHHHHHHHHHHHHHCCCEEEeCC
Confidence 57999999999999999999985 44999999987432 11 11234455666777789999985
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.+..++.. ..|.+++|+++++|.||+|+|.+|+..
T Consensus 254 ~V~~i~~~~~~-----------v~v~~~~g~~i~aD~Vi~A~G~~p~~~ 291 (484)
T 3o0h_A 254 TVSQVQSTENC-----------YNVVLTNGQTICADRVMLATGRVPNTT 291 (484)
T ss_dssp CEEEEEECSSS-----------EEEEETTSCEEEESEEEECCCEEECCT
T ss_pred EEEEEEeeCCE-----------EEEEECCCcEEEcCEEEEeeCCCcCCC
Confidence 89988765431 147778888899999999999987654
No 196
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.09 E-value=5.9e-06 Score=87.62 Aligned_cols=37 Identities=24% Similarity=0.397 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|||||||+||+++|..|++... .+++|+|||+.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~---~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ---GTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT---TSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC---CCCcEEEEeCCC
Confidence 5799999999999999999998321 456999999865
No 197
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.09 E-value=1e-05 Score=85.26 Aligned_cols=40 Identities=28% Similarity=0.351 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccc------cCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVW------QDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~------~~~~~~~V~lIe~~~ 118 (513)
.++|||||||+||+++|..|++... .+..+++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 4799999999999999999998210 001456999999865
No 198
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.08 E-value=2.4e-05 Score=80.60 Aligned_cols=38 Identities=24% Similarity=0.335 Sum_probs=32.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~ 122 (513)
+++|+|||||++||+||..|++. +++|+|+|+++....
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~------g~~v~v~E~~~~~GG 42 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKA------GLSVAVIEARDRVGG 42 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHC------CCcEEEEECCCCCCC
Confidence 46999999999999999999984 559999999875543
No 199
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.08 E-value=9.3e-06 Score=79.44 Aligned_cols=99 Identities=17% Similarity=0.301 Sum_probs=70.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||+|+.|+.+|..|.+. +.+|+++++.+.+.. ...+...+.+.+++.+++++.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~-------------~~~~~~~l~~~l~~~gv~i~~~~ 205 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNI------ASEVHLIHRRDGFRA-------------EKILIKRLMDKVENGNIILHTNR 205 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT------SSEEEEECSSSSCCC-------------CHHHHHHHHHHHHTSSEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCeEEEEEeCCcccc-------------CHHHHHHHHHhcccCCeEEEcCc
Confidence 47899999999999999999985 459999999874421 1123344556667789999976
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCC----c--eEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLES----G--LIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~----g--~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.+.. .+. .|.+.+ | .++++|.+|+|+|.+|+..
T Consensus 206 ~v~~i~~~~~------~v~----~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 250 (320)
T 1trb_A 206 TLEEVTGDQM------GVT----GVRLRDTQNSDNIESLDVAGLFVAIGHSPNTA 250 (320)
T ss_dssp EEEEEEECSS------SEE----EEEEECCTTCCCCEEEECSEEEECSCEEESCG
T ss_pred eeEEEEcCCC------ceE----EEEEEeccCCCceEEEEcCEEEEEeCCCCChH
Confidence 8888875542 000 133322 3 5799999999999887643
No 200
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.07 E-value=9.9e-06 Score=84.66 Aligned_cols=100 Identities=17% Similarity=0.215 Sum_probs=72.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+.+ .+|+++++.+.+. +. ...++...+.+.+++. ++++.+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g------~~Vtlv~~~~~~l--~~---------~d~~~~~~l~~~l~~~-V~i~~~~ 235 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLG------VIVKVFGRSGSVA--NL---------QDEEMKRYAEKTFNEE-FYFDAKA 235 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTT------CEEEEECCTTCCT--TC---------CCHHHHHHHHHHHHTT-SEEETTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcC------CeEEEEEECCccc--cc---------CCHHHHHHHHHHHhhC-cEEEECC
Confidence 579999999999999999999954 4999999988532 11 1124455566667666 998865
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecC--Cc--eEEEecEEEEeCCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE--SG--LIVEYDWLVLSLGAEPKLDV 207 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~--~g--~~i~yD~LVlAtGs~~~~~~ 207 (513)
.|+.+..++.. + .+.+. +| .++++|.||+|+|.+|+...
T Consensus 236 ~v~~i~~~~~~------v-----~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 236 RVISTIEKEDA------V-----EVIYFDKSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp EEEEEEECSSS------E-----EEEEECTTCCEEEEEESEEEECSCCEESCSS
T ss_pred EEEEEEEcCCE------E-----EEEEEeCCCceEEEECCEEEEeeCCccCCCC
Confidence 78888654421 1 24332 56 68999999999999987543
No 201
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.05 E-value=7.5e-06 Score=80.71 Aligned_cols=97 Identities=16% Similarity=0.217 Sum_probs=71.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+++++.+.+... .+....+.+.+++.+++++.+
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~------g~~V~~v~~~~~~~~~-------------~~~~~~l~~~l~~~gv~v~~~~ 212 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDT------ARRITLIHRRPQFRAH-------------EASVKELMKAHEEGRLEVLTPY 212 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTT------SSEEEEECSSSSCCSC-------------HHHHHHHHHHHHTTSSEEETTE
T ss_pred CCEEEEECCCHHHHHHHHHHHhh------CCEEEEEEcCCccCcc-------------HHHHHHHHhccccCCeEEecCC
Confidence 47999999999999999999884 4599999998743211 123345566677789999976
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecC---Cc--eEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE---SG--LIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~---~g--~~i~yD~LVlAtGs~~~~ 205 (513)
++..++.+++. ..|.+. +| .++++|.+|+|+|.+++.
T Consensus 213 ~v~~i~~~~~~-----------~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 254 (335)
T 2zbw_A 213 ELRRVEGDERV-----------RWAVVFHNQTQEELALEVDAVLILAGYITKL 254 (335)
T ss_dssp EEEEEEESSSE-----------EEEEEEETTTCCEEEEECSEEEECCCEEEEC
T ss_pred cceeEccCCCe-----------eEEEEEECCCCceEEEecCEEEEeecCCCCc
Confidence 88888764321 023333 55 689999999999988764
No 202
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.05 E-value=8.1e-06 Score=85.31 Aligned_cols=100 Identities=22% Similarity=0.311 Sum_probs=73.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+.+ .+|+++++.+.+.. . ...++...+.+.+++.|++++.+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g------~~Vtlv~~~~~~l~--~---------~d~~~~~~l~~~l~~~gV~v~~~~ 260 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLG------AKVTVVEFLDTILG--G---------MDGEVAKQLQRMLTKQGIDFKLGA 260 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHT------CEEEEECSSSSSSS--S---------SCHHHHHHHHHHHHHTTCEEECSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcC------CEEEEEeccccccc--c---------CCHHHHHHHHHHHHhCCCEEEECC
Confidence 578999999999999999999864 49999998874321 0 11244556677777889999976
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecC---Cc--eEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE---SG--LIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~---~g--~~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.+..++.. + .+.+. +| +++++|.||+|+|.+|+..
T Consensus 261 ~v~~i~~~~~~------~-----~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~ 303 (491)
T 3urh_A 261 KVTGAVKSGDG------A-----KVTFEPVKGGEATTLDAEVVLIATGRKPSTD 303 (491)
T ss_dssp EEEEEEEETTE------E-----EEEEEETTSCCCEEEEESEEEECCCCEECCT
T ss_pred eEEEEEEeCCE------E-----EEEEEecCCCceEEEEcCEEEEeeCCccCCC
Confidence 78888654321 1 23332 14 5899999999999988754
No 203
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.03 E-value=1.5e-05 Score=82.69 Aligned_cols=100 Identities=15% Similarity=0.248 Sum_probs=75.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++++|||||+.|+.+|..|.+. +.+|+++++.+... +. ...++...+.+.+++.|++++.+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vt~v~~~~~~l--~~---------~~~~~~~~l~~~l~~~Gv~i~~~~ 232 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGL------GVKTTLIYRGKEIL--SR---------FDQDMRRGLHAAMEEKGIRILCED 232 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHTTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEcCCccc--cc---------cCHHHHHHHHHHHHHCCCEEECCC
Confidence 57999999999999999999985 44999999987432 11 11244566677788899999985
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEe-cCCceEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVL-LESGLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~-~~~g~~i~yD~LVlAtGs~~~~~ 206 (513)
.|+.+..++.. . ..|. +++|+ +++|.+|+|+|.+|+..
T Consensus 233 ~v~~i~~~~~~-----~-----~~v~~~~~g~-i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 233 IIQSVSADADG-----R-----RVATTMKHGE-IVADQVMLALGRMPNTN 271 (463)
T ss_dssp CEEEEEECTTS-----C-----EEEEESSSCE-EEESEEEECSCEEESCT
T ss_pred EEEEEEEcCCC-----E-----EEEEEcCCCe-EEeCEEEEeeCcccCCC
Confidence 88888765320 0 1467 78886 99999999999988754
No 204
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.02 E-value=1.8e-05 Score=81.58 Aligned_cols=83 Identities=12% Similarity=0.159 Sum_probs=63.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCe-EEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQ-VLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~-V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (513)
.++|||||||+.|+.+|..|.+.+. + |+|+++++.+ +...++.+ ..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~------~~V~l~~r~~~~--------------------------l~~~~i~~-~~ 258 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAK------HPIYQSLLGGGD--------------------------IQNESLQQ-VP 258 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSC------SSEEEECTTCCS--------------------------CBCSSEEE-EC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhC------CcEEEEeCCCCc--------------------------CCCCCeEE-ec
Confidence 4789999999999999999998543 7 9999997743 22345653 35
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceE-EEecEEEEeCCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLI-VEYDWLVLSLGAEPKLDV 207 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~-i~yD~LVlAtGs~~~~~~ 207 (513)
.|+.+..++. .|.+.+|+. +++|.||+|||.+++.+-
T Consensus 259 ~v~~~~~~~~-------------~v~~~dG~~~~~~D~vi~atG~~~~~~~ 296 (447)
T 2gv8_A 259 EITKFDPTTR-------------EIYLKGGKVLSNIDRVIYCTGYLYSVPF 296 (447)
T ss_dssp CEEEEETTTT-------------EEEETTTEEECCCSEEEECCCBCCCCCC
T ss_pred CeEEEecCCC-------------EEEECCCCEeccCCEEEECCCCCcCCCC
Confidence 6777754332 477788865 689999999999987554
No 205
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.01 E-value=5.7e-06 Score=89.40 Aligned_cols=34 Identities=29% Similarity=0.368 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhh-ccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLES-LVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~-~~~~~~~~~~V~lIe~~~ 118 (513)
..+|||||||++|+++|..|++ .| ++|+|||+.+
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G------~~V~viEr~~ 66 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPD------IRTCIVEQKE 66 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTT------SCEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCC------CCEEEEeCCC
Confidence 4699999999999999999998 54 4999999976
No 206
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.00 E-value=2.1e-05 Score=77.21 Aligned_cols=94 Identities=19% Similarity=0.314 Sum_probs=66.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||+|+.|+.+|..|.+. +.+|+++++.+.+... .....++.+..+++++.+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~~----------------~~~~~~l~~~~gv~i~~~~ 209 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKF------ADEVTVIHRRDTLRAN----------------KVAQARAFANPKMKFIWDT 209 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTT------CSEEEEECSSSSCCSC----------------HHHHHHHHTCTTEEEECSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCEEEEEeCCCcCCcc----------------hHHHHHHHhcCCceEecCC
Confidence 46899999999999999999885 4599999988743210 011223444569999875
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecC---Cce--EEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE---SGL--IVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~---~g~--~i~yD~LVlAtGs~~~~ 205 (513)
+++.++.+.+. ..|.+. +|+ ++++|.+|+|+|.+|+.
T Consensus 210 ~v~~i~~~~~v-----------~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 251 (325)
T 2q7v_A 210 AVEEIQGADSV-----------SGVKLRNLKTGEVSELATDGVFIFIGHVPNT 251 (325)
T ss_dssp EEEEEEESSSE-----------EEEEEEETTTCCEEEEECSEEEECSCEEESC
T ss_pred ceEEEccCCcE-----------EEEEEEECCCCcEEEEEcCEEEEccCCCCCh
Confidence 88888754321 013332 453 78999999999988864
No 207
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.99 E-value=7.9e-06 Score=85.64 Aligned_cols=34 Identities=21% Similarity=0.402 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.+||||||||++|+++|+.|++. +++|+|||+.+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~------G~~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGR------GLSVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhC------CCCEEEEECCC
Confidence 46999999999999999999994 56999999975
No 208
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.98 E-value=1e-05 Score=80.84 Aligned_cols=106 Identities=14% Similarity=0.107 Sum_probs=68.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCC-eEEEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTG-VQFFKD 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~-v~~~~~ 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+++++.+.......-+. ...+..+...+.+.+++.+ ++++.+
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~------g~~V~lv~~~~~~~~~~~d~~----~~~~~~~~~~l~~~l~~~g~v~~~~~ 235 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKN------GSDIALYTSTTGLNDPDADPS----VRLSPYTRQRLGNVIKQGARIEMNVH 235 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHT------TCEEEEECC----------CT----TSCCHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEEECCCcCHHHHHHHHHhc------CCeEEEEecCCCCCCCCCCCC----ccCCHHHHHHHHHHHhhCCcEEEecC
Confidence 35899999999999999999985 449999999874331000000 0011233455666777786 999976
Q ss_pred -eEEEEeCCCCcCcCCCceeeccceEecCCceEEE-ecEEEEeCCCCCCC
Q 010331 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVE-YDWLVLSLGAEPKL 205 (513)
Q Consensus 158 -~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~-yD~LVlAtGs~~~~ 205 (513)
.|+.++.+... ..|.+.+|+++. +|.+|+|+|.+++.
T Consensus 236 ~~v~~i~~~~~~-----------~~v~~~~g~~~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 236 YTVKDIDFNNGQ-----------YHISFDSGQSVHTPHEPILATGFDATK 274 (369)
T ss_dssp CCEEEEEEETTE-----------EEEEESSSCCEEESSCCEECCCBCGGG
T ss_pred cEEEEEEecCCc-----------eEEEecCCeEeccCCceEEeeccCCcc
Confidence 78888532220 146667786665 59999999998764
No 209
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.98 E-value=7.5e-06 Score=91.27 Aligned_cols=34 Identities=32% Similarity=0.487 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~~ 118 (513)
+.+|||||||++|+++|+.|++ .+. +|+|||+++
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~------~G~~~V~vlE~~~ 38 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVT------RGWNNITVLDQGP 38 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH------TTCCCEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHh------CCCCcEEEEeCCC
Confidence 4799999999999999999998 455 899999976
No 210
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.98 E-value=1.4e-05 Score=85.11 Aligned_cols=35 Identities=23% Similarity=0.424 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
..+|||||||+||+++|..|++. +++|+|+|+.+.
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~------g~~v~~~e~~~~ 160 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDA------GAKVILLEKEPI 160 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSS------SCCEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC------CCcEEEEecCCC
Confidence 46899999999999999999984 559999999763
No 211
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.98 E-value=7.7e-06 Score=86.73 Aligned_cols=34 Identities=35% Similarity=0.562 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+|||||++|+++|..|++ .+++|+|||+.+
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~------~G~~V~vlEr~~ 59 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAH------RQVGHLVVEQTD 59 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHH------CCCCEEEEeCCC
Confidence 4699999999999999999999 456999999976
No 212
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.98 E-value=5.7e-05 Score=80.16 Aligned_cols=34 Identities=26% Similarity=0.415 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.+||||||||++|+++|..|++ .+++|+|||+++
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~------~G~~V~LlEk~d 51 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQV------RGIQTGLVEMND 51 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT------TTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh------CCCcEEEEECCC
Confidence 4799999999999999999998 456999999986
No 213
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.97 E-value=1.5e-05 Score=83.69 Aligned_cols=36 Identities=14% Similarity=0.365 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
...||||||||+||++||..|++. +.+|+|||+.+.
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~------G~~V~vlEk~~~ 75 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARA------GADVLVLERTSG 75 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCC
Confidence 357999999999999999999984 559999999763
No 214
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.97 E-value=1.9e-05 Score=82.17 Aligned_cols=102 Identities=21% Similarity=0.223 Sum_probs=73.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|++.+ .+|+++++.+... +. ...++...+.+.+++.|++++.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g------~~Vtlv~~~~~~l--~~---------~d~~~~~~~~~~l~~~gv~i~~~~ 249 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALG------SKTSLMIRHDKVL--RS---------FDSMISTNCTEELENAGVEVLKFS 249 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTT------CEEEEECSSSSSC--TT---------SCHHHHHHHHHHHHHTTCEEETTE
T ss_pred CccEEEECCCHHHHHHHHHHHHcC------CeEEEEEeCCccc--cc---------cCHHHHHHHHHHHHHCCCEEEeCC
Confidence 479999999999999999999854 4999999877432 11 11234556667777889999975
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCC-------ceEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLES-------GLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~-------g~~i~yD~LVlAtGs~~~~~ 206 (513)
.|+.+..+.. ... ..+.+.+ |.++++|.+|+|+|.+|+..
T Consensus 250 ~v~~i~~~~~------~~~---~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 250 QVKEVKKTLS------GLE---VSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp EEEEEEECSS------SEE---EEEEECCTTSCCEEEEEEEESEEEECSCEEESCT
T ss_pred EEEEEEEcCC------CcE---EEEEEccCCCCcccceEEEcCEEEEeeccccCCC
Confidence 7888865422 000 0244443 26799999999999988754
No 215
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.95 E-value=2.6e-05 Score=82.32 Aligned_cols=36 Identities=14% Similarity=0.211 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
..++|+|||+|..|+.+|..|++. +.+|+++++.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~------~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPE------VEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTT------CSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhh------CCEEEEEECCCC
Confidence 357999999999999999999984 459999999885
No 216
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.94 E-value=2.7e-05 Score=75.99 Aligned_cols=93 Identities=20% Similarity=0.324 Sum_probs=67.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+... .....++.++.+++++.+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g------~~v~~~~~~~~~~~~----------------~~~~~~~~~~~gv~~~~~~ 211 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYS------TKVYLIHRRDTFKAQ----------------PIYVETVKKKPNVEFVLNS 211 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHS------SEEEEECSSSSCCSC----------------HHHHHHHHTCTTEEEECSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC------CeEEEEEeCCCCCcC----------------HHHHHHHHhCCCcEEEeCC
Confidence 478999999999999999999864 499999998743210 112344555669999976
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCC---ce--EEEecEEEEeCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLES---GL--IVEYDWLVLSLGAEPK 204 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~---g~--~i~yD~LVlAtGs~~~ 204 (513)
.++.++.+.+. ..|.+.+ |+ ++++|.+|+|+|.+|+
T Consensus 212 ~v~~i~~~~~~-----------~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 252 (323)
T 3f8d_A 212 VVKEIKGDKVV-----------KQVVVENLKTGEIKELNVNGVFIEIGFDPP 252 (323)
T ss_dssp EEEEEEESSSE-----------EEEEEEETTTCCEEEEECSEEEECCCEECC
T ss_pred EEEEEeccCce-----------eEEEEEECCCCceEEEEcCEEEEEECCCCC
Confidence 68888765431 0244433 54 7999999999998875
No 217
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.93 E-value=3.2e-05 Score=76.32 Aligned_cols=96 Identities=18% Similarity=0.308 Sum_probs=68.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||+|+.|+.+|..|.+. +.+|+++++.+.+... +.+ ..+++++.+|+++.+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~------g~~V~l~~~~~~~~~~-------------~~~---~~~~~~~~gV~v~~~~ 212 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRF------ARSVTLVHRRDEFRAS-------------KIM---LDRARNNDKIRFLTNH 212 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT------CSEEEEECSSSSCSSC-------------TTH---HHHHHHCTTEEEECSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHh------CCeEEEEEcCCcCCcc-------------HHH---HHHHhccCCcEEEeCc
Confidence 47999999999999999999884 4599999988743210 111 123455789999975
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecC---Cc--eEEEecEEEEeCCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE---SG--LIVEYDWLVLSLGAEPKLDV 207 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~---~g--~~i~yD~LVlAtGs~~~~~~ 207 (513)
+++.++.+.+. . .|.+. +| .++++|.+|+|+|.+|+...
T Consensus 213 ~v~~i~~~~~~----~-------~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 256 (335)
T 2a87_A 213 TVVAVDGDTTV----T-------GLRVRDTNTGAETTLPVTGVFVAIGHEPRSGL 256 (335)
T ss_dssp EEEEEECSSSC----C-------EEEEEEETTSCCEEECCSCEEECSCEEECCTT
T ss_pred eeEEEecCCcE----e-------EEEEEEcCCCceEEeecCEEEEccCCccChhH
Confidence 88888765431 0 13322 33 57999999999999887543
No 218
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.93 E-value=2.2e-05 Score=77.19 Aligned_cols=94 Identities=12% Similarity=0.160 Sum_probs=66.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHH-HhcCCCeEEEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFAD-LLANTGVQFFKD 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~-~~~~~~v~~~~~ 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+++++.+.+.. ...+.+ +.+..|++++.+
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~------g~~v~~v~~~~~~~~-----------------~~~~~~~l~~~~gv~i~~~ 229 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKY------GSKVFMLVRKDHLRA-----------------STIMQKRAEKNEKIEILYN 229 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT------SSEEEEECSSSSCCS-----------------CHHHHHHHHHCTTEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCEEEEEEcCCccCC-----------------CHHHHHHHHhcCCeEEeec
Confidence 47899999999999999999985 459999999874321 122223 334459999975
Q ss_pred -eEEEEeCCCCcCcCCCceeeccceEecCC-----ceEEEecEEEEeCCCCCCC
Q 010331 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLES-----GLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 -~V~~id~~~~~~~~~~~v~~~~~~v~~~~-----g~~i~yD~LVlAtGs~~~~ 205 (513)
.++.++.+... +. .|.+.+ +.++++|.+|+|+|..|+.
T Consensus 230 ~~v~~i~~~~~~------~~----~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 273 (338)
T 3itj_A 230 TVALEAKGDGKL------LN----ALRIKNTKKNEETDLPVSGLFYAIGHTPAT 273 (338)
T ss_dssp EEEEEEEESSSS------EE----EEEEEETTTTEEEEEECSEEEECSCEEECC
T ss_pred ceeEEEEcccCc------EE----EEEEEECCCCceEEEEeCEEEEEeCCCCCh
Confidence 88888765430 00 133333 4689999999999988764
No 219
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.92 E-value=1.3e-05 Score=82.68 Aligned_cols=33 Identities=30% Similarity=0.376 Sum_probs=29.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQ 116 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~ 116 (513)
.+||||||||++|+++|+.|++.+. .+|+|||+
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~-----~~V~vlE~ 55 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSG-----GSVLVVDA 55 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHC-----SCEEEEES
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCC-----CcEEEEcc
Confidence 4799999999999999999999650 49999999
No 220
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.92 E-value=2.1e-05 Score=78.51 Aligned_cols=98 Identities=26% Similarity=0.315 Sum_probs=69.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||+|+.|+.+|..|.+. +.+|+++++.+.+...+ .+...+.+..++.+++++.+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~------g~~V~lv~~~~~~~~~~-------------~~~~~l~~~~~~~gv~i~~~~ 223 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKN------AASVTLVHRGHEFQGHG-------------KTAHEVERARANGTIDVYLET 223 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTT------SSEEEEECSSSSCSSCS-------------HHHHSSHHHHHHTSEEEESSE
T ss_pred CCcEEEECCCHHHHHHHHHHHhc------CCEEEEEEcCCCCCCCH-------------HHHHHHHHHhhcCceEEEcCc
Confidence 46899999999999999999884 45999999987432211 12233444555678999986
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEec--CCc--eEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLL--ESG--LIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~--~~g--~~i~yD~LVlAtGs~~~~ 205 (513)
+++.++.++. .+ ..|.+ .+| .++++|.+|+|+|..++.
T Consensus 224 ~v~~i~~~~~------~v----~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~ 265 (360)
T 3ab1_A 224 EVASIEESNG------VL----TRVHLRSSDGSKWTVEADRLLILIGFKSNL 265 (360)
T ss_dssp EEEEEEEETT------EE----EEEEEEETTCCEEEEECSEEEECCCBCCSC
T ss_pred CHHHhccCCC------ce----EEEEEEecCCCeEEEeCCEEEECCCCCCCH
Confidence 8888875422 00 01333 355 579999999999988764
No 221
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.92 E-value=2.5e-05 Score=80.91 Aligned_cols=84 Identities=7% Similarity=-0.011 Sum_probs=62.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEEe
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (513)
.++|||||||+.|+.+|..|.+.+ .+|+|+++++...... . ..+|+++ ..
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g------~~V~li~~~~~~~~~~---------~--------------~~~V~~~-~~ 246 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYG------AKKLISCYRTAPMGYK---------W--------------PENWDER-PN 246 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTT------CSEEEEECSSCCCCCC---------C--------------CTTEEEC-SC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhC------CeEEEEEECCCCCCCC---------C--------------CCceEEc-CC
Confidence 478999999999999999999954 4999999876431110 0 1356655 56
Q ss_pred EEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCCC
Q 010331 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDV 207 (513)
Q Consensus 159 V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~~ 207 (513)
|+.++. . .|.+.+|+++++|.||+|||-+++.+.
T Consensus 247 V~~i~~--~-------------~V~~~dG~~i~~D~Vi~atG~~p~~~~ 280 (464)
T 2xve_A 247 LVRVDT--E-------------NAYFADGSSEKVDAIILCTGYIHHFPF 280 (464)
T ss_dssp EEEECS--S-------------EEEETTSCEEECSEEEECCCBCCCCTT
T ss_pred eEEEeC--C-------------EEEECCCCEEeCCEEEECCCCCCCCCC
Confidence 666642 1 377788889999999999999887543
No 222
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.91 E-value=3.9e-05 Score=75.48 Aligned_cols=97 Identities=15% Similarity=0.246 Sum_probs=67.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhH-HHHhcCCCeEEEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRF-ADLLANTGVQFFKD 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~-~~~~~~~~v~~~~~ 157 (513)
.++|+|||||+.|+.+|..|.+. +.+|+++++++.+.. ...+ .+++++.+++++.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~------g~~V~lv~~~~~~~~-----------------~~~~~~~~~~~~gv~i~~~ 215 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKY------GSKVYIIHRRDAFRA-----------------SKIMQQRALSNPKIDVIWN 215 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------SSEEEEECSSSSCCS-----------------CHHHHHHHHTCTTEEEECS
T ss_pred CCeEEEECCChHHHHHHHHHHhc------CCeEEEEecCCcCCc-----------------cHHHHHHHHhCCCeeEecC
Confidence 46899999999999999999884 459999999874321 1122 24556789999865
Q ss_pred -eEEEEeCCCCcCcCCCceeeccceEecC---Cc--eEEEecEEEEeCCCCCCCC
Q 010331 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLE---SG--LIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 -~V~~id~~~~~~~~~~~v~~~~~~v~~~---~g--~~i~yD~LVlAtGs~~~~~ 206 (513)
+++.++.+... ..+. .|.+. +| .++++|.||+|+|.+|+..
T Consensus 216 ~~v~~i~~~~~~----~~v~----~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 262 (333)
T 1vdc_A 216 SSVVEAYGDGER----DVLG----GLKVKNVVTGDVSDLKVSGLFFAIGHEPATK 262 (333)
T ss_dssp EEEEEEEESSSS----SSEE----EEEEEETTTCCEEEEECSEEEECSCEEESCG
T ss_pred CceEEEeCCCCc----ccee----eEEEEecCCCceEEEecCEEEEEeCCccchH
Confidence 88888755410 0000 13332 33 5799999999999988643
No 223
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.90 E-value=1.6e-05 Score=82.22 Aligned_cols=38 Identities=18% Similarity=0.272 Sum_probs=32.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
.++|+|||||..|+.+|..|.+.. ++.+|++|++++.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~----~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSY----PSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHC----TTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcC----CCCeEEEEEeCCCC
Confidence 578999999999999999999851 35599999998753
No 224
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.90 E-value=2.5e-05 Score=75.99 Aligned_cols=95 Identities=14% Similarity=0.219 Sum_probs=65.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||+|+.|+.+|..|.+. +.+|+++++++.+... ......+.++.+++++.+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~~----------------~~~~~~l~~~~gv~v~~~~ 200 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANI------CKKVYLIHRRDGFRCA----------------PITLEHAKNNDKIEFLTPY 200 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTT------SSEEEEECSSSSCCSC----------------HHHHHHHHTCTTEEEETTE
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCEEEEEeeCCccCCC----------------HHHHHHHhhCCCeEEEeCC
Confidence 47999999999999999999985 4599999998743210 011223334579999865
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecC---Cce--EEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE---SGL--IVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~---~g~--~i~yD~LVlAtGs~~~~ 205 (513)
.++.++.++. .+ ..|.+. +|+ ++++|.+|+|+|.+|+.
T Consensus 201 ~v~~i~~~~~------~v----~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 243 (311)
T 2q0l_A 201 VVEEIKGDAS------GV----SSLSIKNTATNEKRELVVPGFFIFVGYDVNN 243 (311)
T ss_dssp EEEEEEEETT------EE----EEEEEEETTTCCEEEEECSEEEECSCEEECC
T ss_pred EEEEEECCCC------cE----eEEEEEecCCCceEEEecCEEEEEecCccCh
Confidence 7888865421 00 013332 454 78999999999998864
No 225
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.88 E-value=2.5e-05 Score=81.45 Aligned_cols=100 Identities=18% Similarity=0.148 Sum_probs=71.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+.+ .+|+++++...+ +. ...++...+.+.+++.|++++.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g------~~Vtlv~~~~~l---~~---------~d~~~~~~l~~~l~~~Gv~i~~~~ 248 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLG------YEPTVMVRSIVL---RG---------FDQQMAELVAASMEERGIPFLRKT 248 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT------CEEEEEESSCSS---TT---------SCHHHHHHHHHHHHHTTCCEEETE
T ss_pred CCcEEEECCCHHHHHHHHHHHHcC------CEEEEEeCCCCC---cc---------cCHHHHHHHHHHHHhCCCEEEeCC
Confidence 468999999999999999999854 499999985311 11 11244556677778889999986
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCc-----eEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESG-----LIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g-----~~i~yD~LVlAtGs~~~~~ 206 (513)
.|+.+...+.. .+ .|.+.++ .++++|.||+|+|.+|+..
T Consensus 249 ~v~~i~~~~~~-----~~-----~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 249 VPLSVEKQDDG-----KL-----LVKYKNVETGEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp EEEEEEECTTS-----CE-----EEEEEETTTCCEEEEEESEEEECSCEEECCG
T ss_pred EEEEEEEcCCC-----cE-----EEEEecCCCCceeEEEcCEEEECcccccCcC
Confidence 78888753320 01 2444332 3789999999999987643
No 226
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.86 E-value=3.8e-05 Score=75.12 Aligned_cols=38 Identities=21% Similarity=0.272 Sum_probs=32.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
..||+|||||++|+++|..|++.+ ++.+|+|+|+++..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~----~g~~V~v~e~~~~~ 102 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNR----PDLKVCIIESSVAP 102 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHC----TTSCEEEECSSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcC----CCCeEEEEecCccc
Confidence 469999999999999999999851 25699999997643
No 227
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.85 E-value=3.1e-05 Score=75.80 Aligned_cols=94 Identities=16% Similarity=0.370 Sum_probs=66.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+.+ .+|+++++.+.+.. ...+.+.+.+.+++++.+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g------~~V~~i~~~~~~~~-----------------~~~l~~~l~~~gv~i~~~~ 211 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYV------KNVTIIEYMPKYMC-----------------ENAYVQEIKKRNIPYIMNA 211 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTB------SEEEEECSSSSCCS-----------------CHHHHHHHHHTTCCEECSE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhC------CcEEEEEcCCccCC-----------------CHHHHHHHhcCCcEEEcCC
Confidence 368999999999999999999854 49999998774321 012333444678998875
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEec---CCce--EEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLL---ESGL--IVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~---~~g~--~i~yD~LVlAtGs~~~~ 205 (513)
+++.+..++.. +. .|.+ .+|+ ++++|.||+|+|..|+.
T Consensus 212 ~v~~i~~~~~~------v~----~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 254 (319)
T 3cty_A 212 QVTEIVGDGKK------VT----GVKYKDRTTGEEKLIETDGVFIYVGLIPQT 254 (319)
T ss_dssp EEEEEEESSSS------EE----EEEEEETTTCCEEEECCSEEEECCCEEECC
T ss_pred eEEEEecCCce------EE----EEEEEEcCCCceEEEecCEEEEeeCCccCh
Confidence 88888754320 00 1333 2453 68999999999988764
No 228
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.85 E-value=4.6e-05 Score=74.13 Aligned_cols=94 Identities=19% Similarity=0.321 Sum_probs=65.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcC-CCeEEEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLAN-TGVQFFKD 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~-~~v~~~~~ 157 (513)
.++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+.+. ..+.+.+++ .+++++.+
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g------~~Vtlv~~~~~~~~~-----------------~~~~~~l~~~~gv~v~~~ 200 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIV------EHVTLLEFAPEMKAD-----------------QVLQDKLRSLKNVDIILN 200 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTB------SEEEEECSSSSCCSC-----------------HHHHHHHHTCTTEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC------CEEEEEEeCcccCcc-----------------HHHHHHHhhCCCeEEecC
Confidence 468999999999999999999854 499999988744110 123334444 69999875
Q ss_pred -eEEEEeCCCCcCcCCCceeeccceEecC---Cc--eEEEecEEEEeCCCCCCC
Q 010331 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLE---SG--LIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 -~V~~id~~~~~~~~~~~v~~~~~~v~~~---~g--~~i~yD~LVlAtGs~~~~ 205 (513)
+++.++.++. .+. .|.+. +| .++++|.+|+|+|.+|+.
T Consensus 201 ~~v~~i~~~~~------~v~----~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 244 (310)
T 1fl2_A 201 AQTTEVKGDGS------KVV----GLEYRDRVSGDIHNIELAGIFVQIGLLPNT 244 (310)
T ss_dssp EEEEEEEESSS------SEE----EEEEEETTTCCEEEEECSEEEECSCEEESC
T ss_pred CceEEEEcCCC------cEE----EEEEEECCCCcEEEEEcCEEEEeeCCccCc
Confidence 8888875432 010 12322 34 378999999999988764
No 229
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.84 E-value=4.4e-05 Score=83.18 Aligned_cols=97 Identities=18% Similarity=0.083 Sum_probs=71.4
Q ss_pred CCeEEEEC--CCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEE
Q 010331 79 KPRICILG--GGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (513)
Q Consensus 79 ~~~VVIVG--gG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (513)
.++|+||| ||+.|+.+|..|.+.+ .+|+++++.+...-. .........+.+.+++.||+++.
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g------~~Vtlv~~~~~l~~~----------~~~~~~~~~l~~~l~~~GV~i~~ 586 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKG------YEVSIVTPGAQVSSW----------TNNTFEVNRIQRRLIENGVARVT 586 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTT------CEEEEEESSSSTTGG----------GGGGTCHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCC------CeeEEEecccccccc----------cccchhHHHHHHHHHHCCCEEEc
Confidence 46799999 9999999999999854 499999987732210 11123345566777788999998
Q ss_pred E-eEEEEeCCCCcCcCCCceeeccceEe---cCCceEEEecEEEEeCCCCCC
Q 010331 157 D-RVKLLCPSDHLGVNGPMACTHGGTVL---LESGLIVEYDWLVLSLGAEPK 204 (513)
Q Consensus 157 ~-~V~~id~~~~~~~~~~~v~~~~~~v~---~~~g~~i~yD~LVlAtGs~~~ 204 (513)
+ +|+.|+.+.. .+. +.+++++++|.||+|+|.+|+
T Consensus 587 ~~~V~~i~~~~~-------------~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 587 DHAVVAVGAGGV-------------TVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp SEEEEEEETTEE-------------EEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred CcEEEEEECCeE-------------EEEEccCCeEEEEECCEEEECCCCCCC
Confidence 6 8888875432 122 345678999999999999875
No 230
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.84 E-value=3.5e-05 Score=80.44 Aligned_cols=100 Identities=16% Similarity=0.162 Sum_probs=70.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|++.+ .+|+++++.... +. ...++...+.+.+++.||+++.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g------~~Vtlv~~~~~l---~~---------~d~~~~~~l~~~l~~~gv~~~~~~ 246 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIG------LDTTVMMRSIPL---RG---------FDQQMSSLVTEHMESHGTQFLKGC 246 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT------CCEEEEESSCSS---TT---------SCHHHHHHHHHHHHHTTCEEEETE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcC------CceEEEEcCccc---cc---------CCHHHHHHHHHHHHHCCCEEEeCC
Confidence 468999999999999999999854 499999986411 11 11245566677788889999986
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecC---Cce--EEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE---SGL--IVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~---~g~--~i~yD~LVlAtGs~~~~~ 206 (513)
.++.+...+.. .+ .+.+. +|+ ++++|.+|+|+|.+|+..
T Consensus 247 ~v~~i~~~~~~-----~~-----~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 247 VPSHIKKLPTN-----QL-----QVTWEDHASGKEDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp EEEEEEECTTS-----CE-----EEEEEETTTTEEEEEEESEEEECSCEEESCG
T ss_pred EEEEEEEcCCC-----cE-----EEEEEeCCCCeeEEEECCEEEEcccCCcccC
Confidence 78888643210 01 23332 244 578999999999988654
No 231
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.84 E-value=2.7e-05 Score=81.44 Aligned_cols=103 Identities=22% Similarity=0.288 Sum_probs=72.0
Q ss_pred CeEEEECCCHHHHHHHHHhhhcccc--------CCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQ--------DDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTG 151 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~--------~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~ 151 (513)
.++||||||+.|+.+|..|++++.. ...+.+|+|||..+... |.+ .+++.....+.+++.|
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il--~~~---------~~~~~~~~~~~L~~~G 286 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL--NMF---------EKKLSSYAQSHLENTS 286 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS--TTS---------CHHHHHHHHHHHHHTT
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc--cCC---------CHHHHHHHHHHHHhcc
Confidence 4799999999999999988764320 01236899999988431 111 1245566677888899
Q ss_pred eEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCCc----eEEEecEEEEeCCCCCC
Q 010331 152 VQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESG----LIVEYDWLVLSLGAEPK 204 (513)
Q Consensus 152 v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g----~~i~yD~LVlAtGs~~~ 204 (513)
|+++.+ .|+.++.+... ..+..++| ++++||.+|.|+|.+++
T Consensus 287 V~v~~~~~v~~v~~~~~~-----------~~~~~~dg~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 287 IKVHLRTAVAKVEEKQLL-----------AKTKHEDGKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp CEEETTEEEEEECSSEEE-----------EEEECTTSCEEEEEEECSEEEECCCEECC
T ss_pred eeeecCceEEEEeCCceE-----------EEEEecCcccceeeeccCEEEEccCCcCC
Confidence 999975 88888765421 02333454 36999999999998764
No 232
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.83 E-value=3.7e-05 Score=74.73 Aligned_cols=98 Identities=17% Similarity=0.267 Sum_probs=68.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||+|+.|+.+|..|.+. +.+|+++++.+.+... ...+.+++++.|++++.+
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~------g~~v~~~~~~~~~~~~----------------~~~~~~~~~~~gv~~~~~~ 204 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANI------CSKIYLIHRRDEFRAA----------------PSTVEKVKKNEKIELITSA 204 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTT------SSEEEEECSSSSCBSC----------------HHHHHHHHHCTTEEEECSC
T ss_pred cCEEEEECCCHHHHHHHHHHHhh------CCEEEEEEeCCCCCCC----------------HHHHHHHHhcCCeEEEeCc
Confidence 47899999999999999999984 4599999998754110 122334556789999965
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCce--EEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGL--IVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~--~i~yD~LVlAtGs~~~~~ 206 (513)
.+..++.+... + ..-.+...+|+ ++++|.+|+|+|.+|+..
T Consensus 205 ~v~~i~~~~~~------~--~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 247 (315)
T 3r9u_A 205 SVDEVYGDKMG------V--AGVKVKLKDGSIRDLNVPGIFTFVGLNVRNE 247 (315)
T ss_dssp EEEEEEEETTE------E--EEEEEECTTSCEEEECCSCEEECSCEEECCG
T ss_pred EEEEEEcCCCc------E--EEEEEEcCCCCeEEeecCeEEEEEcCCCCch
Confidence 88888654410 0 00022233664 799999999999887643
No 233
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.81 E-value=7.6e-05 Score=78.85 Aligned_cols=36 Identities=11% Similarity=0.240 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
..++|+|||+|+.|+.+|..|++.+ .+|+++++.+.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~------~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETA------KELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTB------SEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhC------CEEEEEEcCCC
Confidence 3579999999999999999999854 49999999885
No 234
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.79 E-value=5.7e-06 Score=83.62 Aligned_cols=87 Identities=17% Similarity=0.266 Sum_probs=63.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|++.+ .+|+|+++.+......+ ..++...+.+.+++.|++++.+
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g------~~Vtvv~~~~~~l~~~~----------~~~~~~~~~~~l~~~gV~~~~~~ 209 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSG------TPASIGIILEYPLERQL----------DRDGGLFLKDKLDRLGIKIYTNS 209 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHT------CCEEEECSSSSSCTTTS----------CHHHHHHHHHHHHTTTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC------CeEEEEEcCCccchhhc----------CHHHHHHHHHHHHhCCCEEEeCC
Confidence 368999999999999999999864 49999999874321111 1234455667777889988765
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~ 205 (513)
.++. + |+++++|.+|+|+|.+|+.
T Consensus 210 ~v~~--------------------i----g~~~~~D~vv~a~G~~p~~ 233 (385)
T 3klj_A 210 NFEE--------------------M----GDLIRSSCVITAVGVKPNL 233 (385)
T ss_dssp CGGG--------------------C----HHHHHHSEEEECCCEEECC
T ss_pred EEEE--------------------c----CeEEecCeEEECcCcccCh
Confidence 2211 1 5578999999999998864
No 235
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.78 E-value=4.4e-05 Score=81.49 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..||||||||.||++||..|++ .+.+|+|||+.+
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~------~G~~V~vlEK~~ 40 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQ------SGQTCALLSKVF 40 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCcEEEEecCC
Confidence 4699999999999999999998 456999999975
No 236
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.77 E-value=9.5e-05 Score=79.18 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..||||||||.||++||..|++ .+.+|+|||+..
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~------~G~~V~vlEK~~ 51 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSE------AGFNTACVTKLF 51 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC
T ss_pred cCCEEEECccHHHHHHHHHHHH------CCCcEEEEeccC
Confidence 4699999999999999999998 456999999975
No 237
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.76 E-value=9.7e-05 Score=71.87 Aligned_cols=101 Identities=16% Similarity=0.204 Sum_probs=61.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+++ .+|+|+++.+..... ...........++..+..
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G------~~Vt~v~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 209 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYG------SKVIILHRRDAFRAS----------------KTMQERVLNHPKIEVIWNS 209 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTS------SEEEEECSSSSCCSC----------------HHHHHHHHTCTTEEEECSE
T ss_pred CCeEEEECCChHHHHHHHHHHHhC------Ceeeeeccccccccc----------------chhhhhhhcccceeeEeee
Confidence 478999999999999999999865 499999976532110 111122333445555432
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~~ 206 (513)
.+..+...... ...+.+ ..+...+++++++|.+++|+|.+|+..
T Consensus 210 ~~~~i~~~~~~---~~~~~~--~~~~~~~~~~i~~d~vi~a~G~~pn~~ 253 (314)
T 4a5l_A 210 ELVELEGDGDL---LNGAKI--HNLVSGEYKVVPVAGLFYAIGHSPNSK 253 (314)
T ss_dssp EEEEEEESSSS---EEEEEE--EETTTCCEEEEECSEEEECSCEEESCG
T ss_pred eeEEEEeeeec---cceeEE--eecccccceeeccccceEecccccChh
Confidence 44444322210 000100 012234567899999999999988754
No 238
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.74 E-value=2.1e-05 Score=86.28 Aligned_cols=37 Identities=24% Similarity=0.417 Sum_probs=32.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~ 121 (513)
.++|+|||||++|+++|..|++.| ++|+|+|+++...
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g------~~v~v~E~~~~~g 372 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFG------IKVTVLEAKDRIG 372 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHT------CEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC------CcEEEEeccccee
Confidence 579999999999999999999954 4999999977543
No 239
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.74 E-value=7.5e-05 Score=73.12 Aligned_cols=93 Identities=26% Similarity=0.364 Sum_probs=67.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. +. ....+.+++.+|+++.+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~------~~v~~~~~~~~~~--~~---------------~~~~~~l~~~gv~~~~~~ 210 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIA------KEVSIIHRRDKFR--AH---------------EHSVENLHASKVNVLTPF 210 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTB------SEEEEECSSSSCS--SC---------------HHHHHHHHHSSCEEETTE
T ss_pred CCEEEEECCCHhHHHHHHHHHhhC------CeEEEEEecCcCC--cc---------------HHHHHHHhcCCeEEEeCc
Confidence 478999999999999999999854 4999999887431 10 11122355789999974
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCC-----ceEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLES-----GLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~-----g~~i~yD~LVlAtGs~~~~ 205 (513)
.++.++.+++. ..|.+.+ +.++++|.+|+|+|..|+.
T Consensus 211 ~v~~i~~~~~~-----------~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 252 (332)
T 3lzw_A 211 VPAELIGEDKI-----------EQLVLEEVKGDRKEILEIDDLIVNYGFVSSL 252 (332)
T ss_dssp EEEEEECSSSC-----------CEEEEEETTSCCEEEEECSEEEECCCEECCC
T ss_pred eeeEEecCCce-----------EEEEEEecCCCceEEEECCEEEEeeccCCCc
Confidence 88888765431 0243333 4679999999999988764
No 240
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.73 E-value=5.7e-05 Score=78.31 Aligned_cols=98 Identities=17% Similarity=0.256 Sum_probs=67.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|.+.+ .+|+++++.+..... . ...++...+.+.++ ++++.+
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g------~~Vtlv~~~~~~l~~-~---------~d~~~~~~l~~~l~---v~i~~~~ 232 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMG------VQTHIIEMLDRALIT-L---------EDQDIVNTLLSILK---LNIKFNS 232 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTT------CEEEEECSSSSSCTT-S---------CCHHHHHHHHHHHC---CCEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcC------CEEEEEEeCCcCCCC-C---------CCHHHHHHHHhcCE---EEEEECC
Confidence 478999999999999999999854 499999997743211 0 01133344444443 777765
Q ss_pred eEEEEeCCC-CcCcCCCceeeccceEecC--Cce--EEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSD-HLGVNGPMACTHGGTVLLE--SGL--IVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~-~~~~~~~~v~~~~~~v~~~--~g~--~i~yD~LVlAtGs~~~~~ 206 (513)
+|+.++.++ .. ..+.++ +|+ ++++|.+|+|+|.+|+..
T Consensus 233 ~v~~i~~~~~~~-----------v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 233 PVTEVKKIKDDE-----------YEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp CEEEEEEEETTE-----------EEEEECCTTSCCEEEEESCEEECCCEEECCC
T ss_pred EEEEEEEcCCCc-----------EEEEEEecCCceEEEEcCEEEECcCCCcccc
Confidence 777776532 10 134555 554 799999999999988755
No 241
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.73 E-value=7.6e-05 Score=78.47 Aligned_cols=105 Identities=12% Similarity=0.139 Sum_probs=68.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|++++ .+|+|+++... .+.+ ..++...+.+.+++.||+++.+
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G------~~Vtlv~~~~~---l~~~---------d~~~~~~~~~~l~~~GV~v~~~~ 271 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIG------LDVTVMVRSIL---LRGF---------DQDMANKIGEHMEEHGIKFIRQF 271 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT------CCEEEEESSCS---STTS---------CHHHHHHHHHHHHHTTCEEEESE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcC------CeEEEEecccc---cccC---------CHHHHHHHHHHHHHCCCEEEeCC
Confidence 467999999999999999999854 49999997421 1111 1245556667788889999876
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCc---eEEEecEEEEeCCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESG---LIVEYDWLVLSLGAEPKLD 206 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g---~~i~yD~LVlAtGs~~~~~ 206 (513)
.++.+...+. .....+.+ .+...++ .++++|.+|+|+|.+|+..
T Consensus 272 ~v~~v~~~~~--~~~~~~~v---~~~~~~g~~~~~~~~D~vi~a~G~~p~~~ 318 (519)
T 3qfa_A 272 VPIKVEQIEA--GTPGRLRV---VAQSTNSEEIIEGEYNTVMLAIGRDACTR 318 (519)
T ss_dssp EEEEEEEEEC--CTTCEEEE---EEEESSSSCEEEEEESEEEECSCEEESCS
T ss_pred eEEEEEEccC--CCCceEEE---EEEECCCcEEEEEECCEEEEecCCcccCC
Confidence 5555543110 00000111 1222344 3578999999999988754
No 242
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.73 E-value=4.8e-05 Score=80.32 Aligned_cols=56 Identities=11% Similarity=0.042 Sum_probs=38.0
Q ss_pred CCCeEeCCCccccCCCCEEEEcccccccCCCCCCCC-CchHHHHHHHHHHHHHHHHHH
Q 010331 368 RGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLP-ATAQVAFQQADFAGWNLWAAI 424 (513)
Q Consensus 368 ~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~-~~a~~A~~qg~~~a~ni~~~l 424 (513)
.|.|.||...|+ ..|++||+|+|+...-.....+. .....|.-.|+.+++++...+
T Consensus 354 ~GGi~vd~~~~t-~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 354 CGGVMVDDHGRT-DVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp SCEEECCTTCBC-SSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCcEEECCCCCC-ccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 577999998887 89999999999842110111121 223356677899999987654
No 243
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.65 E-value=3.2e-05 Score=79.36 Aligned_cols=37 Identities=30% Similarity=0.381 Sum_probs=30.6
Q ss_pred CCCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 76 ~~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..++++|+|||||++|+++|..|++. +++|+|||+++
T Consensus 19 ~~m~~~ViIVGaGpaGl~~A~~La~~------G~~V~viE~~~ 55 (430)
T 3ihm_A 19 SHMKKRIGIVGAGTAGLHLGLFLRQH------DVDVTVYTDRK 55 (430)
T ss_dssp ----CEEEEECCHHHHHHHHHHHHHT------TCEEEEEESCC
T ss_pred CcCCCCEEEECCcHHHHHHHHHHHHC------CCeEEEEcCCC
Confidence 34568999999999999999999994 56999999976
No 244
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.63 E-value=0.0001 Score=77.96 Aligned_cols=36 Identities=17% Similarity=0.316 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
..++|+|||+|..|+.+|..|++.+. +|+++++.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~------~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAE------QLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBS------EEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCC------EEEEEECCCC
Confidence 35799999999999999999998654 9999999885
No 245
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.60 E-value=0.00013 Score=78.09 Aligned_cols=104 Identities=20% Similarity=0.263 Sum_probs=66.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|||||||+.|+.+|..|++++ .+|+|+++.. ..+.+ ..++...+.+.+++.||+++.+
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g------~~Vtlv~~~~---~l~~~---------d~~~~~~~~~~l~~~gv~i~~~~ 347 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLG------GDVTVMVRSI---LLRGF---------DQQMAEKVGDYMENHGVKFAKLC 347 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT------CCEEEEESSC---SSTTS---------CHHHHHHHHHHHHHTTCEEEETE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC------CEEEEEECCc---CcCcC---------CHHHHHHHHHHHHhCCCEEEECC
Confidence 468999999999999999999854 4899999862 11111 1133445556677789999875
Q ss_pred eEEEEeCC-----CCcCcCCCceeeccceEecCCceEEE--ecEEEEeCCCCCCC
Q 010331 158 RVKLLCPS-----DHLGVNGPMACTHGGTVLLESGLIVE--YDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~-----~~~~~~~~~v~~~~~~v~~~~g~~i~--yD~LVlAtGs~~~~ 205 (513)
.++.+... .. + ....+.+ .+.+.+|++++ +|.||+|+|.+|+.
T Consensus 348 ~v~~v~~~~~~~~~~-~-~~~~~~v---~~~~~~g~~~~~~~D~vi~a~G~~p~~ 397 (598)
T 2x8g_A 348 VPDEIKQLKVVDTEN-N-KPGLLLV---KGHYTDGKKFEEEFETVIFAVGREPQL 397 (598)
T ss_dssp EEEEEEEEECCBTTT-T-BCCEEEE---EEEETTSCEEEEEESEEEECSCEEECG
T ss_pred eEEEEEecccccccc-C-CCceEEE---EEEeCCCcEEeccCCEEEEEeCCcccc
Confidence 55555311 00 0 0000110 12234665554 99999999998864
No 246
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.52 E-value=0.00021 Score=70.62 Aligned_cols=33 Identities=24% Similarity=0.441 Sum_probs=28.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|+|||||+.|+.+|..|.+. + +|+++.+++
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~------~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTV------A-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------S-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhh------C-CEEEEECCC
Confidence 47999999999999999999874 2 799998874
No 247
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.50 E-value=5.5e-05 Score=78.09 Aligned_cols=43 Identities=30% Similarity=0.485 Sum_probs=34.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~ 121 (513)
+++|+|||||++||+||++|++.|....++.+|+|+|+++...
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCC
Confidence 5799999999999999999999762112336999999987543
No 248
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.50 E-value=9.1e-05 Score=80.21 Aligned_cols=34 Identities=26% Similarity=0.327 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhh-----ccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLES-----LVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~-----~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+|||||++|+++|..|++ .| ++|+|||+.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~G------i~v~viE~~~ 46 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPD------LKVRIIDKRS 46 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTT------CCEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCC------CCEEEEeCCC
Confidence 4689999999999999999998 54 5999999875
No 249
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.47 E-value=0.00017 Score=69.50 Aligned_cols=137 Identities=14% Similarity=0.076 Sum_probs=76.1
Q ss_pred HHHHHHHh-CCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEec----ccccC--CcceEEeeceE
Q 010331 268 AALKVLSA-RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQ----PAIKG--LESQIFEADLV 340 (513)
Q Consensus 268 ~~~~~l~~-~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~----~~~~~--~~g~~i~aD~v 340 (513)
.+.+.+.+ .||++++++.+.++..++... .++.+... ...++ .+..++++|.|
T Consensus 124 ~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v--------------------~gv~~~~~~~~~~~~~g~~g~~~~i~ad~V 183 (284)
T 1rp0_A 124 TIMSKLLARPNVKLFNAVAAEDLIVKGNRV--------------------GGVVTNWALVAQNHHTQSCMDPNVMEAKIV 183 (284)
T ss_dssp HHHHHHHTSTTEEEEETEEEEEEEEETTEE--------------------EEEEEEEHHHHTCTTTSSCCCCEEEEEEEE
T ss_pred HHHHHHHhcCCCEEEcCcEEEEEEecCCeE--------------------EEEEEeccccccccCccccCceEEEECCEE
Confidence 34444544 799999999999997643100 12222210 00000 12368999999
Q ss_pred EEecCCCCCCCCCCCCCCccCC--CccCCCCCeEeCC-------CccccCCCCEEEEcccccccCCCCCC-CCCchHHHH
Q 010331 341 LWTVGSKPLLPHVEPPNNRLHD--LPLNARGQAETDE-------TLCVKGHPRIFALGDSSALRDSSGRP-LPATAQVAF 410 (513)
Q Consensus 341 i~a~G~~p~~~~l~~~~~~~~~--~~~~~~G~i~Vd~-------~l~~~~~p~VfaiGD~a~~~~~~g~~-~~~~a~~A~ 410 (513)
|.|+|..++............+ ..+.....+.++. ..++ ..|++|++||++...+ |.+ ..++...+.
T Consensus 184 V~AtG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~~~~--g~~~~gp~~~~~~ 260 (284)
T 1rp0_A 184 VSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVAEID--GAPRMGPTFGAMM 260 (284)
T ss_dssp EECCCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHHHHH--TCEECCSCCHHHH
T ss_pred EECCCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehhhhc--CCCCcChHHHHHH
Confidence 9999988764221100000000 1111111122221 2233 4699999999975421 111 234566888
Q ss_pred HHHHHHHHHHHHHHCCC
Q 010331 411 QQADFAGWNLWAAINDR 427 (513)
Q Consensus 411 ~qg~~~a~ni~~~l~~~ 427 (513)
.+|+.+|.+|...++..
T Consensus 261 ~sG~~~a~~i~~~l~~~ 277 (284)
T 1rp0_A 261 ISGQKAGQLALKALGLP 277 (284)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HhHHHHHHHHHHHhhhh
Confidence 99999999999988643
No 250
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.46 E-value=0.0001 Score=75.13 Aligned_cols=38 Identities=26% Similarity=0.477 Sum_probs=33.0
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCC-CeEEEEeCCCCcc
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSERFV 121 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~-~~V~lIe~~~~~~ 121 (513)
++++|+|||||++||+||..|++. + .+|+|+|+++...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~------g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA------GFHDYTILERTDHVG 43 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT------TCCCEEEECSSSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC------CCCcEEEEECCCCCC
Confidence 457999999999999999999984 4 5999999988653
No 251
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.45 E-value=0.00022 Score=77.35 Aligned_cols=103 Identities=18% Similarity=0.223 Sum_probs=66.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhcccc-------------------------------CCCCCeEEEEeCCCCcccCCchh
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQ-------------------------------DDKKPQVLLVDQSERFVFKPMLY 127 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~-------------------------------~~~~~~V~lIe~~~~~~~~p~~~ 127 (513)
.++|||||||+.|+.+|..|++.+.. .....+|+++++.+...
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l------ 567 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKP------ 567 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCT------
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhh------
Confidence 57999999999999999999986520 00113455555543111
Q ss_pred hhhhccccCCcchHhHHHHhcCCCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCCc--eEEEecEEEEeCCCCCC
Q 010331 128 ELLSGEVDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVLSLGAEPK 204 (513)
Q Consensus 128 ~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g--~~i~yD~LVlAtGs~~~ 204 (513)
...+. ......+.+.+++.||+++.+ +|+.++.+. . .+. .+| +++++|.||+|+|.+|+
T Consensus 568 ---~~~l~-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~-v------------~~~-~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 568 ---GQGLG-KTTGWIHRTTLLSRGVKMIPGVSYQKIDDDG-L------------HVV-INGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp ---TTTSC-TTTHHHHHHHHHHTTCEEECSCEEEEEETTE-E------------EEE-ETTEEEEECCSEEEECCCEEEC
T ss_pred ---ccccc-cccHHHHHHHHHhcCCEEEeCcEEEEEeCCe-E------------EEe-cCCeEEEEeCCEEEECCCcccc
Confidence 00111 123334556677889999986 788886432 1 222 455 57999999999999876
Q ss_pred C
Q 010331 205 L 205 (513)
Q Consensus 205 ~ 205 (513)
.
T Consensus 630 ~ 630 (671)
T 1ps9_A 630 R 630 (671)
T ss_dssp C
T ss_pred H
Confidence 3
No 252
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.42 E-value=0.00044 Score=72.60 Aligned_cols=94 Identities=18% Similarity=0.269 Sum_probs=65.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcC-CCeEEEEE
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLAN-TGVQFFKD 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~-~~v~~~~~ 157 (513)
.++|+|||||+.|+.+|..|++.+. +|+++++.+.... + ..+.+.+++ .||+++.+
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~------~Vtlv~~~~~l~~--------------~---~~l~~~l~~~~gV~v~~~ 411 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVE------HVTLLEFAPEMKA--------------D---QVLQDKVRSLKNVDIILN 411 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBS------EEEEECSSSSCCS--------------C---HHHHHHHTTCTTEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCC------EEEEEEeCcccCc--------------C---HHHHHHHhcCCCcEEEeC
Confidence 4689999999999999999998654 9999998774321 0 223344555 69999876
Q ss_pred -eEEEEeCCCCcCcCCCceeeccceEecC---Cc--eEEEecEEEEeCCCCCCC
Q 010331 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLE---SG--LIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 -~V~~id~~~~~~~~~~~v~~~~~~v~~~---~g--~~i~yD~LVlAtGs~~~~ 205 (513)
.++.+..++.. +. .+.+. +| .++++|.+|+|+|..|+.
T Consensus 412 ~~v~~i~~~~~~------v~----~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~ 455 (521)
T 1hyu_A 412 AQTTEVKGDGSK------VV----GLEYRDRVSGDIHSVALAGIFVQIGLLPNT 455 (521)
T ss_dssp EEEEEEEECSSS------EE----EEEEEETTTCCEEEEECSEEEECCCEEESC
T ss_pred CEEEEEEcCCCc------EE----EEEEEeCCCCceEEEEcCEEEECcCCCCCc
Confidence 78888654320 00 12222 34 378999999999988764
No 253
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.40 E-value=0.00018 Score=72.05 Aligned_cols=38 Identities=26% Similarity=0.411 Sum_probs=32.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCC-CCc
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQS-ERF 120 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~-~~~ 120 (513)
...++|+|||||++||+||+.|.+. +++|+|+|++ +..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~------G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA------GHDVTILEANANRV 80 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT------SCEEEEECSCSSCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC------CCcEEEEecccccc
Confidence 4467999999999999999999984 5599999998 643
No 254
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.40 E-value=0.00048 Score=66.96 Aligned_cols=100 Identities=16% Similarity=0.193 Sum_probs=57.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|+|||||+.|+.+|..|++.+ .+|+||++.+.+... .......++..++.+...
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g------~~Vtlv~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 202 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFA------DKVTIVHRRDELRAQ----------------RILQDRAFKNDKIDFIWSH 202 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTC------SEEEEECSSSSCCSC----------------HHHHHHHHHCTTEEEECSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcC------CEEEEEecccccCcc----------------hhHHHHHHHhcCcceeeec
Confidence 369999999999999999999854 499999998743210 011122333444544432
Q ss_pred eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~~ 205 (513)
.+..+...+.. ............++..+++|.+++++|..++.
T Consensus 203 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~ 245 (312)
T 4gcm_A 203 TLKSINEKDGK-----VGSVTLTSTKDGSEETHEADGVFIYIGMKPLT 245 (312)
T ss_dssp EEEEEEEETTE-----EEEEEEEETTTCCEEEEECSEEEECSCEEESC
T ss_pred ceeeeeccccc-----cccceeeeecCCceeEEeeeeEEeecCCCcCc
Confidence 22222111110 00000001122345689999999999988764
No 255
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.37 E-value=0.00018 Score=74.83 Aligned_cols=39 Identities=28% Similarity=0.440 Sum_probs=33.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~ 121 (513)
.+.++|+|||||++||+||..|++. +++|+|+|+++...
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~------g~~v~v~E~~~~~G 47 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKA------GYKVTVLEARTRPG 47 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC------CCCEEEEeccCCCC
Confidence 3467999999999999999999984 55999999987543
No 256
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.35 E-value=0.00018 Score=71.66 Aligned_cols=35 Identities=31% Similarity=0.451 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
++.||||||||++|+++|+.|++ .+.+|+|||+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~------~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILAR------KGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHh------CCCEEEEEeccC
Confidence 35799999999999999999998 456999999875
No 257
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.33 E-value=0.00016 Score=74.51 Aligned_cols=40 Identities=18% Similarity=0.198 Sum_probs=34.1
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~ 123 (513)
..+||||||||++|++||..|++. +.+|+|+|++++....
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~------G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVD------GKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCCCCCcc
Confidence 347999999999999999999994 5599999999865443
No 258
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.31 E-value=0.00012 Score=76.93 Aligned_cols=38 Identities=26% Similarity=0.427 Sum_probs=33.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCC-CeEEEEeCCCCccc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSERFVF 122 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~-~~V~lIe~~~~~~~ 122 (513)
.++|||||||+|||+||..|++. + .+|+|+|+++....
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~------G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQN------GIQDCLVLEARDRVGG 46 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHT------TCCSEEEECSSSSSBT
T ss_pred CCcEEEECCCHHHHHHHHHHHhc------CCCCEEEEeCCCCCCC
Confidence 46999999999999999999984 4 59999999885544
No 259
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.30 E-value=0.00025 Score=80.03 Aligned_cols=90 Identities=19% Similarity=0.171 Sum_probs=65.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
.++|||||||+.|+.+|..|.+.+ .+|+|||+.+... . . .+.+++.||+++.+
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G------~~Vtvv~~~~~~~-----~----------~-----~~~l~~~GV~v~~~~ 337 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATG------GVVAVIDARSSIS-----A----------A-----AAQAVADGVQVISGS 337 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGT------CCSEEEESCSSCC-----H----------H-----HHHHHHTTCCEEETE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcC------CcEEEEECCCccc-----h----------h-----HHHHHhCCeEEEeCC
Confidence 368999999999999999999864 3799999987431 0 0 24456789999986
Q ss_pred eEEEEeC--CCCcCcCCCceeeccceEecCC-------c--eEEEecEEEEeCCCCCCC
Q 010331 158 RVKLLCP--SDHLGVNGPMACTHGGTVLLES-------G--LIVEYDWLVLSLGAEPKL 205 (513)
Q Consensus 158 ~V~~id~--~~~~~~~~~~v~~~~~~v~~~~-------g--~~i~yD~LVlAtGs~~~~ 205 (513)
.++.|.. +++. ..|.+.+ | +++++|.||+|+|.+|+.
T Consensus 338 ~v~~i~~~~~~~v-----------~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 338 VVVDTEADENGEL-----------SAIVVAELDEARELGGTQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp EEEEEEECTTSCE-----------EEEEEEEECTTCCEEEEEEEECSEEEEECCEEECC
T ss_pred EeEEEeccCCCCE-----------EEEEEEeccccCCCCceEEEEcCEEEECCCcCcCh
Confidence 7888865 2221 0133322 4 689999999999988763
No 260
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.29 E-value=0.00038 Score=76.19 Aligned_cols=98 Identities=21% Similarity=0.193 Sum_probs=65.5
Q ss_pred CCeEEEEC--CCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEE
Q 010331 79 KPRICILG--GGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (513)
Q Consensus 79 ~~~VVIVG--gG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (513)
.++||||| ||+.|+.+|..|++++ .+|+||++.+ ..... .. +. . ...+.+.+++.||+++.
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G------~~Vtlv~~~~-l~~~~----~~----~~-~-~~~~~~~l~~~GV~i~~ 590 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAG------HEVTIVSGVH-LANYM----HF----TL-E-YPNMMRRLHELHVEELG 590 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTT------CEEEEEESSC-TTHHH----HH----TT-C-HHHHHHHHHHTTCEEEC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcC------CEEEEEeccc-ccccc----cc----cc-c-HHHHHHHHHhCCCEEEc
Confidence 46999999 9999999999999854 4999999877 21100 00 00 1 23455666678999997
Q ss_pred E-eEEEEeCCCCcCcCCCceeeccceEecCCc-------------------eEEEecEEEEeCCCCCC
Q 010331 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESG-------------------LIVEYDWLVLSLGAEPK 204 (513)
Q Consensus 157 ~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g-------------------~~i~yD~LVlAtGs~~~ 204 (513)
+ +++.|+.+.. .+ .....++ .++++|.||+|+|.+|+
T Consensus 591 ~~~v~~i~~~~v--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 591 DHFCSRIEPGRM--------EI---YNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp SEEEEEEETTEE--------EE---EETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred CcEEEEEECCeE--------EE---EEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 6 7888864321 00 0001111 23899999999998875
No 261
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.29 E-value=0.00018 Score=74.58 Aligned_cols=40 Identities=28% Similarity=0.471 Sum_probs=32.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~ 122 (513)
...++|+|||||++|++||..|++ .+++|+|+|+++....
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~------~g~~v~v~E~~~~~GG 53 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRS------RGTDAVLLESSARLGG 53 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHT------TTCCEEEECSSSSSBT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHH------CCCCEEEEEcCCCCCc
Confidence 445799999999999999999998 4569999999886543
No 262
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.27 E-value=0.00018 Score=72.27 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=31.5
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
.+|+|||||++|+++|..|++. .++++|+|||+++..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~----~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQA----RPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhc----CCCCCEEEEECCCCC
Confidence 3799999999999999999985 126699999997744
No 263
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.26 E-value=0.00021 Score=72.48 Aligned_cols=38 Identities=24% Similarity=0.414 Sum_probs=32.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~ 121 (513)
.++|+|||||++|++||..|++. .+.+|+|+|+++...
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~-----~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQ-----LDKRVLVLERRPHIG 44 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHH-----SCCCEEEECSSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHh-----CCCCEEEEeCCCCCC
Confidence 57999999999999999999984 145999999988543
No 264
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.23 E-value=0.00022 Score=70.75 Aligned_cols=39 Identities=21% Similarity=0.226 Sum_probs=31.1
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+||||||||++|+++|+.|++.+....++.+|+|||++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 389999999999999999999651001236999999976
No 265
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.22 E-value=0.00035 Score=72.06 Aligned_cols=38 Identities=16% Similarity=0.112 Sum_probs=31.4
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
..++|||||||..|+.+|..+.+.+. -+|+++++++..
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga-----~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGA-----TSVKCLYRRDRK 300 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTC-----SEEEEECSSCST
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCC-----CEEEEEEeCCcc
Confidence 35799999999999999999988532 269999988744
No 266
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.21 E-value=0.00057 Score=69.32 Aligned_cols=96 Identities=16% Similarity=0.135 Sum_probs=67.4
Q ss_pred CeEEEECCCH-------------------------HHHHHHHHh----hhccccCCCCCeEEEEeCCCCcccCCchhhhh
Q 010331 80 PRICILGGGF-------------------------GGLYTALRL----ESLVWQDDKKPQVLLVDQSERFVFKPMLYELL 130 (513)
Q Consensus 80 ~~VVIVGgG~-------------------------AGl~aA~~L----~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~ 130 (513)
.++||||+|+ +|+..|..+ .+.+. ..+.+|+++++.+.+ +.+
T Consensus 146 ~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~--~~~~~v~~~~~~~~l---~~~---- 216 (409)
T 3h8l_A 146 GGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGM--LDKVHVTVFSPGEYL---SDL---- 216 (409)
T ss_dssp SEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTC--TTTEEEEEECSSSSS---TTB----
T ss_pred CCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCC--CCCeEEEEEeCCccc---ccc----
Confidence 5788999992 577877544 44332 133599999987711 111
Q ss_pred hccccCCcchHhHHHHhcCCCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCC
Q 010331 131 SGEVDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPK 204 (513)
Q Consensus 131 ~g~~~~~~~~~~~~~~~~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~ 204 (513)
..++...+.+.+++.||+++.+ +|+.++.+ .|.+++|+++++|.+|+|+|..++
T Consensus 217 -----~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~---------------~v~~~~g~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 217 -----SPNSRKAVASIYNQLGIKLVHNFKIKEIREH---------------EIVDEKGNTIPADITILLPPYTGN 271 (409)
T ss_dssp -----CHHHHHHHHHHHHHHTCEEECSCCEEEECSS---------------EEEETTSCEEECSEEEEECCEECC
T ss_pred -----CHHHHHHHHHHHHHCCCEEEcCCceEEECCC---------------eEEECCCCEEeeeEEEECCCCCcc
Confidence 1234556677777889999985 78888643 367788889999999999998764
No 267
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.19 E-value=0.00029 Score=71.08 Aligned_cols=37 Identities=38% Similarity=0.489 Sum_probs=32.6
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
..++|+|||||++|+++|..|++. +.+|+|+|+++..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~------g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASS------GQRVLIVDRRPHI 64 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHC------CCceEEEeccCCC
Confidence 457999999999999999999984 5599999998754
No 268
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.14 E-value=0.0023 Score=65.93 Aligned_cols=41 Identities=20% Similarity=0.157 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccc--------------cCCCC-CeEEEEeCCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVW--------------QDDKK-PQVLLVDQSER 119 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~--------------~~~~~-~~V~lIe~~~~ 119 (513)
.++|||||+|+.|+.+|..|.+... -...+ .+|+||++++.
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 5799999999999999999987310 00013 39999999874
No 269
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.13 E-value=0.00041 Score=72.26 Aligned_cols=57 Identities=16% Similarity=0.142 Sum_probs=43.8
Q ss_pred ChhHHHHHHHHHHhCC-cEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceE
Q 010331 262 TPGNREAALKVLSARK-VQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLV 340 (513)
Q Consensus 262 ~~~~~~~~~~~l~~~g-V~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~v 340 (513)
...+.+.+.+.+.+.| ++|++++.|++|...+ +++.+++. +|+++.||.|
T Consensus 254 ~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~-----------------------~~v~v~~~------~g~~~~ad~v 304 (495)
T 2vvm_A 254 QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNER-----------------------DAARVTAR------DGREFVAKRV 304 (495)
T ss_dssp HHHHHHHHHHHHHTTTCEEEESSCCEEEEEECS-----------------------SSEEEEET------TCCEEEEEEE
T ss_pred HHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcC-----------------------CEEEEEEC------CCCEEEcCEE
Confidence 3455566677788888 9999999999998644 45556543 5678999999
Q ss_pred EEecCCC
Q 010331 341 LWTVGSK 347 (513)
Q Consensus 341 i~a~G~~ 347 (513)
|+|+|..
T Consensus 305 I~a~~~~ 311 (495)
T 2vvm_A 305 VCTIPLN 311 (495)
T ss_dssp EECCCGG
T ss_pred EECCCHH
Confidence 9999964
No 270
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.12 E-value=0.00045 Score=71.97 Aligned_cols=39 Identities=31% Similarity=0.365 Sum_probs=33.4
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~ 122 (513)
..++|+|||||++|++||..|++.| .+|+|+|+++....
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g------~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAG------HQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHT------CEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC------CeEEEEECCCCCCC
Confidence 3579999999999999999999854 59999999875543
No 271
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.12 E-value=0.00033 Score=72.55 Aligned_cols=38 Identities=32% Similarity=0.547 Sum_probs=32.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
+++|+|||||++|+++|++|++.+ ++.+|+|+|+++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g----~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAF----PDLNITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHC----TTSEEEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhC----CCCCEEEEECCCCC
Confidence 479999999999999999999964 23699999997754
No 272
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.11 E-value=0.00038 Score=72.62 Aligned_cols=37 Identities=22% Similarity=0.414 Sum_probs=32.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~ 121 (513)
.++|+|||||++||+||..|++ .+++|+|+|+++...
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~------~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKI------HGLNVTVFEAEGKAG 49 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT------TSCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHH------CCCcEEEEEeCCCCC
Confidence 5799999999999999999998 456999999988653
No 273
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.10 E-value=0.00042 Score=70.87 Aligned_cols=100 Identities=16% Similarity=0.156 Sum_probs=65.0
Q ss_pred CeEEEECCCHHH------HHHH----HHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcC
Q 010331 80 PRICILGGGFGG------LYTA----LRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLAN 149 (513)
Q Consensus 80 ~~VVIVGgG~AG------l~aA----~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~ 149 (513)
++++|||||+.| +..| ..|++.+. ..+.+|+++++.+...... +.+ ..++...+.+.+++
T Consensus 143 ~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~--~~~~~V~~v~~~~~~~~~~-----l~~---~~~~~~~l~~~l~~ 212 (430)
T 3h28_A 143 PGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGI--RYKVPMTFITSEPYLGHFG-----VGG---IGASKRLVEDLFAE 212 (430)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTC--GGGCCEEEECSSSSTTCTT-----TTC---STTHHHHHHHHHHH
T ss_pred CCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCC--ccceEEEEecCCccccccc-----cCc---chHHHHHHHHHHHH
Confidence 457899998654 6665 44555432 1346899999887432211 011 11345566677888
Q ss_pred CCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCC----ceEEEecEEEEeCCCCCC
Q 010331 150 TGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLES----GLIVEYDWLVLSLGAEPK 204 (513)
Q Consensus 150 ~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~----g~~i~yD~LVlAtGs~~~ 204 (513)
.||+++.+ .|+.|+.+. +.+++ ++++++|.+|+|+|..+.
T Consensus 213 ~GV~i~~~~~v~~v~~~~---------------v~~~~~~~~g~~i~~D~vv~a~G~~~~ 257 (430)
T 3h28_A 213 RNIDWIANVAVKAIEPDK---------------VIYEDLNGNTHEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp TTCEEECSCEEEEECSSE---------------EEEECTTSCEEEEECSEEEEECEEECC
T ss_pred CCCEEEeCCEEEEEeCCe---------------EEEEecCCCceEEeeeEEEECCCCccc
Confidence 99999986 888886532 23333 678999999999997653
No 274
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.10 E-value=0.00039 Score=69.12 Aligned_cols=48 Identities=19% Similarity=0.129 Sum_probs=40.9
Q ss_pred CCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCCCC
Q 010331 374 DETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLL 430 (513)
Q Consensus 374 d~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~~~ 430 (513)
+++|+++..+|+|++|+.+.. .-...|..||-+++.|+...+.|+++.
T Consensus 320 ~~tle~k~~~~Lf~AGqi~G~---------~Gy~eAaa~Gl~AG~naa~~~~g~~p~ 367 (443)
T 3g5s_A 320 GETLEFREAEGLYAAGVLAGV---------EGYLESAATGFLAGLNAARKALGLPPV 367 (443)
T ss_dssp CTTSEETTEEEEEECGGGGTB---------CSHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ChhceecCCCCEEECcccccc---------HHHHHHHHhHHHHHHHHHHHhcCCCCC
Confidence 478999889999999999986 234488899999999999999998753
No 275
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.02 E-value=0.00044 Score=69.15 Aligned_cols=35 Identities=26% Similarity=0.424 Sum_probs=31.0
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
++|+|||||++|+++|..|++. +.+|+|+|+++..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~------g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKL------NKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGG------TCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC------CCcEEEEecCCCC
Confidence 5899999999999999999984 4599999998754
No 276
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.99 E-value=0.0026 Score=65.53 Aligned_cols=42 Identities=21% Similarity=0.117 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccc----c----------CCCCC-eEEEEeCCCCc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVW----Q----------DDKKP-QVLLVDQSERF 120 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~----~----------~~~~~-~V~lIe~~~~~ 120 (513)
.++|||||||+.|+.+|..|.+..- . ...+. +|+||++++..
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 5799999999999999999983100 0 01344 79999998743
No 277
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=96.97 E-value=0.00061 Score=70.84 Aligned_cols=38 Identities=32% Similarity=0.397 Sum_probs=32.6
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
+.++|+|||||++|+++|..|++.+ ..+|+|+|+++..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g-----~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELG-----YKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTT-----CCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcC-----CCCEEEEeCCCCC
Confidence 4579999999999999999999843 2599999998854
No 278
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.96 E-value=0.00075 Score=69.13 Aligned_cols=104 Identities=12% Similarity=0.116 Sum_probs=63.4
Q ss_pred CeEEEECCCHHH------HHHH----HHhhhccccCCCCCe-EEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhc
Q 010331 80 PRICILGGGFGG------LYTA----LRLESLVWQDDKKPQ-VLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLA 148 (513)
Q Consensus 80 ~~VVIVGgG~AG------l~aA----~~L~~~~~~~~~~~~-V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~ 148 (513)
++++|||||+.| +..| ..|++.+. ..+.+ |+++++.+...... +.+ ..+....+.+.++
T Consensus 150 ~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~--~~~~~~Vtlv~~~~~~~~~~-----l~~---~~~~~~~~~~~l~ 219 (437)
T 3sx6_A 150 PGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGM--RDKIPSFTFITSEPYIGHLG-----IQG---VGDSKGILTKGLK 219 (437)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTC--GGGCSCEEEEESSSSTTCTT-----TTC---CTTHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCC--cccCcEEEEEcCCccccccc-----cCc---chHHHHHHHHHHH
Confidence 467899996643 6666 55555432 12334 99999987432110 111 1134456667788
Q ss_pred CCCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCC-----ceEEEecEEEEeCCCCCC
Q 010331 149 NTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLES-----GLIVEYDWLVLSLGAEPK 204 (513)
Q Consensus 149 ~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~-----g~~i~yD~LVlAtGs~~~ 204 (513)
+.||+++.+ .|+.|+.+.. .+ ....++ +.++++|.+++|+|..+.
T Consensus 220 ~~gI~~~~~~~v~~v~~~~v--------~~---~~~~~~g~~~~~~~i~~D~vv~~~g~~~~ 270 (437)
T 3sx6_A 220 EEGIEAYTNCKVTKVEDNKM--------YV---TQVDEKGETIKEMVLPVKFGMMIPAFKGV 270 (437)
T ss_dssp HTTCEEECSEEEEEEETTEE--------EE---EEECTTSCEEEEEEEECSEEEEECCEECC
T ss_pred HCCCEEEcCCEEEEEECCeE--------EE---EecccCCccccceEEEEeEEEEcCCCcCc
Confidence 899999975 8888875431 00 001122 568999999999996543
No 279
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=96.95 E-value=0.00077 Score=67.84 Aligned_cols=36 Identities=31% Similarity=0.493 Sum_probs=31.7
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~ 121 (513)
.+|+|||||++|+++|..|.+. +.+|+|+|+++...
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~------g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEK------GHQVHIIDQRDHIG 39 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC------CCcEEEEEecCCcC
Confidence 6999999999999999999984 56999999987543
No 280
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.86 E-value=0.0019 Score=62.44 Aligned_cols=90 Identities=12% Similarity=0.115 Sum_probs=62.6
Q ss_pred CeEEEECCC-HHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEEe
Q 010331 80 PRICILGGG-FGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (513)
Q Consensus 80 ~~VVIVGgG-~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (513)
++++||||| .+++.+|..+.+. +.+|+++++.+. +...+.+.+++.++.++...
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~------~~~v~i~~~~~~-------------------~~~~~~~~l~~~g~~~~~~~ 201 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNW------STDLVIATNGNE-------------------LSQTIMDELSNKNIPVITES 201 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTT------CSCEEEECSSCC-------------------CCHHHHHHHHTTTCCEECSC
T ss_pred CceeeecCCCchhhhHHHHHHhC------CceEEEEecccc-------------------chhhhhhhhhccceeEeeee
Confidence 456666666 6788999888874 448999977552 12334455667788888887
Q ss_pred EEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCC
Q 010331 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPK 204 (513)
Q Consensus 159 V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~ 204 (513)
+..+..++.. + ..|.+++|++++.|.+|++.|..+.
T Consensus 202 v~~~~~~~~~------~----~~v~~~~g~~i~~~~~vi~~g~~~~ 237 (304)
T 4fk1_A 202 IRTLQGEGGY------L----KKVEFHSGLRIERAGGFIVPTFFRP 237 (304)
T ss_dssp EEEEESGGGC------C----CEEEETTSCEECCCEEEECCEEECS
T ss_pred EEEeecCCCe------e----eeeeccccceeeecceeeeeccccC
Confidence 8777654321 0 1477889999999999999987653
No 281
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.82 E-value=0.0023 Score=72.66 Aligned_cols=102 Identities=13% Similarity=0.013 Sum_probs=59.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (513)
..+|||||||+.|+.+|..+.++|. -+|+|+++++.... +... ..+ +.+++.|++|+..
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~-----~~Vtvv~r~~~~~~-~~~~-------------~e~-~~~~~~Gv~~~~~~ 391 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGA-----RRVFLVFRKGFVNI-RAVP-------------EEV-ELAKEEKCEFLPFL 391 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTC-----SEEEEECSSCGGGC-CSCH-------------HHH-HHHHHTTCEEECSE
T ss_pred CCcEEEECCChHHHHHHHHHHHcCC-----CEEEEEEecChhhC-CCCH-------------HHH-HHHHHcCCEEEeCC
Confidence 4599999999999999999998531 28999998763211 1111 011 2344568888754
Q ss_pred eEEEEeCCCCcCcCCCceeec-------cceEecCC-ceEEEecEEEEeCCCCC
Q 010331 158 RVKLLCPSDHLGVNGPMACTH-------GGTVLLES-GLIVEYDWLVLSLGAEP 203 (513)
Q Consensus 158 ~V~~id~~~~~~~~~~~v~~~-------~~~v~~~~-g~~i~yD~LVlAtGs~~ 203 (513)
.++.+..++.. ...+.+. +..+..++ ..++++|.||+|+|.++
T Consensus 392 ~~~~i~~~~g~---v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~ 442 (1025)
T 1gte_A 392 SPRKVIVKGGR---IVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVL 442 (1025)
T ss_dssp EEEEEEEETTE---EEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEEC
T ss_pred CceEEEccCCe---EEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCC
Confidence 55655432110 0001000 11111111 14789999999999865
No 282
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.74 E-value=0.00095 Score=70.87 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..||||||||.+|+++|+.|++. +++|+|||+++
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~r------G~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAAS------GIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCCC
Confidence 36999999999999999999984 56999999976
No 283
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=96.73 E-value=0.0012 Score=67.43 Aligned_cols=58 Identities=10% Similarity=0.006 Sum_probs=44.4
Q ss_pred ChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceE-EEecccccCCcceEEeeceE
Q 010331 262 TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI-LELQPAIKGLESQIFEADLV 340 (513)
Q Consensus 262 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~~~~~~~~g~~i~aD~v 340 (513)
...+.+.+.+.+++.|+++++++.|++|...+ +++. +.. +|+++.||.|
T Consensus 233 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~-----------------------~~v~~v~~-------~g~~~~ad~V 282 (433)
T 1d5t_A 233 LGELPQGFARLSAIYGGTYMLNKPVDDIIMEN-----------------------GKVVGVKS-------EGEVARCKQL 282 (433)
T ss_dssp TTHHHHHHHHHHHHHTCCCBCSCCCCEEEEET-----------------------TEEEEEEE-------TTEEEECSEE
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEeC-----------------------CEEEEEEE-------CCeEEECCEE
Confidence 45666777788888999999999999997643 3332 221 6778999999
Q ss_pred EEecCCCCC
Q 010331 341 LWTVGSKPL 349 (513)
Q Consensus 341 i~a~G~~p~ 349 (513)
|+++|..+.
T Consensus 283 V~a~~~~~~ 291 (433)
T 1d5t_A 283 ICDPSYVPD 291 (433)
T ss_dssp EECGGGCGG
T ss_pred EECCCCCcc
Confidence 999998764
No 284
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.69 E-value=0.0017 Score=70.20 Aligned_cols=39 Identities=33% Similarity=0.538 Sum_probs=33.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~ 121 (513)
...++|+|||||++|+++|..|.+. +++|+|+|+++...
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~------g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSF------GMDVTLLEARDRVG 143 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHT------TCEEEEECSSSSSB
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHC------CCeEEEEecCCCCC
Confidence 4468999999999999999999984 55999999987543
No 285
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=96.69 E-value=0.0011 Score=68.19 Aligned_cols=58 Identities=14% Similarity=0.031 Sum_probs=42.6
Q ss_pred ChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCc-eEEEecccccCCcceEEeeceE
Q 010331 262 TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDK-YILELQPAIKGLESQIFEADLV 340 (513)
Q Consensus 262 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~~~~~~~~g~~i~aD~v 340 (513)
...+.+.+.+.+++.|+++++++.|++|..+++ +. ..+++. +|+++.||.|
T Consensus 255 ~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~----------------------g~v~gV~~~------~G~~i~Ad~V 306 (475)
T 3p1w_A 255 LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDD----------------------NKVCGIKSS------DGEIAYCDKV 306 (475)
T ss_dssp TTHHHHHHHHHHHHC--CEESSCCEEEEEECTT----------------------SCEEEEEET------TSCEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecC----------------------CeEEEEEEC------CCcEEECCEE
Confidence 456777788889999999999999999976221 22 224432 6778999999
Q ss_pred EEecCCC
Q 010331 341 LWTVGSK 347 (513)
Q Consensus 341 i~a~G~~ 347 (513)
|.++|+.
T Consensus 307 I~a~~~~ 313 (475)
T 3p1w_A 307 ICDPSYV 313 (475)
T ss_dssp EECGGGC
T ss_pred EECCCcc
Confidence 9999988
No 286
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.68 E-value=0.0011 Score=71.29 Aligned_cols=57 Identities=16% Similarity=0.118 Sum_probs=39.0
Q ss_pred CCCCeEeCCCccccCCCCEEEEcccccccCCCC-CCCCC-chHHHHHHHHHHHHHHHHHHC
Q 010331 367 ARGQAETDETLCVKGHPRIFALGDSSALRDSSG-RPLPA-TAQVAFQQADFAGWNLWAAIN 425 (513)
Q Consensus 367 ~~G~i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g-~~~~~-~a~~A~~qg~~~a~ni~~~l~ 425 (513)
..|.|.||.+.|+ ..|++||+|+|+...- .| ..+.. ....+.-.|+.+++++.....
T Consensus 371 t~GGi~vd~~~~v-~IpGLYAaGE~a~~g~-hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 429 (660)
T 2bs2_A 371 SMGGIRTDYRGEA-KLKGLFSAGEAACWDM-HGFNRLGGNSVSEAVVAGMIVGEYFAEHCA 429 (660)
T ss_dssp ECCEEECCTTSBC-SSBTEEECGGGEECCS-STTCCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEECCCCce-ecCCEEeccccccccc-cCCCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 3588999999999 8999999999864211 12 11221 223466778888888877653
No 287
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.66 E-value=0.0011 Score=69.61 Aligned_cols=36 Identities=39% Similarity=0.613 Sum_probs=32.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
.+|+||||||+||+.+|.+|++ +++++|+|||+.+.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse-----~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSE-----DPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTT-----STTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHh-----CCCCeEEEEcCCCC
Confidence 5899999999999999999987 36789999999864
No 288
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.63 E-value=0.002 Score=71.25 Aligned_cols=39 Identities=33% Similarity=0.538 Sum_probs=33.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~ 121 (513)
...++|+|||||++||+||..|.+. +++|+|+|+++...
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~------g~~v~v~E~~~~~G 314 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSF------GMDVTLLEARDRVG 314 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC------CCcEEEEEecCcCC
Confidence 3467999999999999999999984 55999999987543
No 289
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.63 E-value=0.0061 Score=64.18 Aligned_cols=36 Identities=14% Similarity=0.411 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
.++|+|||+|..|+.+|..|++.+. +|+++++.+.+
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~------~vtv~~r~~~~ 221 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAA------ELFVFQRTPHF 221 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBS------EEEEEESSCCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCc------eEEEEEcCCcc
Confidence 5799999999999999999998644 99999987744
No 290
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.60 E-value=0.0012 Score=71.17 Aligned_cols=40 Identities=23% Similarity=0.381 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..||||||||.||++||..|++......++.+|+|||+..
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~ 61 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKAS 61 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecC
Confidence 4799999999999999999998400000156999999965
No 291
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.53 E-value=0.0019 Score=66.75 Aligned_cols=37 Identities=24% Similarity=0.573 Sum_probs=31.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCCCCcc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSERFV 121 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~~~~~ 121 (513)
.++|+|||||++|+++|..|.+ .++ +|+|+|+++...
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~------~g~~~v~~~e~~~~~g 41 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSE------AGITDLLILEATDHIG 41 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHH------TTCCCEEEECSSSSSB
T ss_pred CCeEEEECCCHHHHHHHHHHHh------cCCCceEEEeCCCCCC
Confidence 4789999999999999999998 456 899999987543
No 292
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.50 E-value=0.0018 Score=68.44 Aligned_cols=36 Identities=31% Similarity=0.454 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
..+|+||||+|++|+.+|.+|.+ .+.+|+|||+.+.
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~------~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSE------AGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHh------CCCeEEEEeCCCC
Confidence 45899999999999999999998 4569999999874
No 293
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.47 E-value=0.0018 Score=69.79 Aligned_cols=35 Identities=34% Similarity=0.541 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHhh---hccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLE---SLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~---~~~~~~~~~~~V~lIe~~~ 118 (513)
..||||||||.||++||..|+ +. .+.+|+|||+.+
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~-----~G~~V~vlEK~~ 59 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKL-----GGLKVTLVEKAA 59 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTT-----TTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhh-----CCCeEEEEeCcC
Confidence 479999999999999999998 41 345999999976
No 294
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.39 E-value=0.0021 Score=68.05 Aligned_cols=36 Identities=33% Similarity=0.551 Sum_probs=32.4
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+||||||.||+.+|.+|.+ +++.+|+|||+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse-----~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTE-----NPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTT-----STTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHh-----CCCCcEEEEecCC
Confidence 35899999999999999999986 3678999999987
No 295
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.38 E-value=0.0021 Score=69.35 Aligned_cols=42 Identities=29% Similarity=0.455 Sum_probs=33.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhcccc--CCCCCeEEEEeCCC-Cc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQ--DDKKPQVLLVDQSE-RF 120 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~--~~~~~~V~lIe~~~-~~ 120 (513)
.++|+|||||++||+||+.|.+.+.. ...+++|+|+|+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 46899999999999999999986510 00126999999988 65
No 296
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.36 E-value=0.0025 Score=67.52 Aligned_cols=37 Identities=30% Similarity=0.393 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
..+|+||||||.||+.+|.+|.+ +.+.+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse-----~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAE-----NPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTT-----STTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHh-----CCCCcEEEEecCCC
Confidence 34899999999999999999997 24579999999875
No 297
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.04 E-value=0.011 Score=61.51 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=31.6
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
..++|+|||+|..|+.++..|++. ..+.+|+++-+++.
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~----~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKR----YPNSRTTLIMRDSA 282 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH----STTCEEEEECSSSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHhc----CCCceEEEEeCCCc
Confidence 357899999999999999999874 24679999988763
No 298
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=95.88 E-value=0.0038 Score=65.71 Aligned_cols=35 Identities=26% Similarity=0.378 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
.+|+||||||.||+.+|.+|.+ +. +|+|||+.+..
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~------~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KY------KVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TS------CEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CC------cEEEEecCCCc
Confidence 4899999999999999999987 44 99999998753
No 299
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.78 E-value=0.004 Score=65.78 Aligned_cols=37 Identities=24% Similarity=0.312 Sum_probs=32.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
.+|+||||||.||+.+|.+|.+ +++.+|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse-----~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTE-----DPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTT-----STTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHh-----CcCCcEEEEecCCcc
Confidence 3799999999999999999987 367899999998754
No 300
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.68 E-value=0.009 Score=62.31 Aligned_cols=37 Identities=24% Similarity=0.503 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
..++++|||+|++|+.+|.+|.+ .+.+|+|||++...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~------~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQ------AGIPTQIVEMGRSW 46 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH------CCCcEEEEECCCCC
Confidence 45899999999999999999998 46699999998743
No 301
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.65 E-value=0.0077 Score=62.78 Aligned_cols=37 Identities=24% Similarity=0.445 Sum_probs=32.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~ 121 (513)
.++++|||+|++|+.+|.+|.+ .+.+|+|||+++...
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~------~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGE------AGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCcEEEEeCCCCCC
Confidence 4799999999999999999998 456999999987543
No 302
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.48 E-value=0.022 Score=57.95 Aligned_cols=102 Identities=11% Similarity=0.005 Sum_probs=61.8
Q ss_pred CeEEEECCCH------HHHH----HHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcC
Q 010331 80 PRICILGGGF------GGLY----TALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLAN 149 (513)
Q Consensus 80 ~~VVIVGgG~------AGl~----aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~ 149 (513)
+.+||+|||+ ++.. ++..+.+.+. ..+.+|++++..+..... .. .........+.+.+++
T Consensus 143 ~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~--~~~v~v~~~~~~~~l~~~------~~--~~~~~~~~~l~~~l~~ 212 (430)
T 3hyw_A 143 PGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGI--RYKVPMTFITSEPYLGHF------GV--GGIGASKRLVEDLFAE 212 (430)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTC--GGGCCEEEECSSSSTTCT------TT--TCSTTHHHHHHHHHHH
T ss_pred CceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcc--cccceeeeecccchhhhc------cc--hhhHHHHHHHHHHHHh
Confidence 4567777664 1222 3334444432 245789999887633210 00 1112344556677888
Q ss_pred CCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCC--ceEEEecEEEEeCCCCCC
Q 010331 150 TGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLES--GLIVEYDWLVLSLGAEPK 204 (513)
Q Consensus 150 ~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~--g~~i~yD~LVlAtGs~~~ 204 (513)
.||+++.+ .|+.++.+.. .+...+ ++++++|.+|+++|.+++
T Consensus 213 ~GV~~~~~~~v~~v~~~~~-------------~~~~~~g~~~~i~~d~vi~~~G~~~~ 257 (430)
T 3hyw_A 213 RNIDWIANVAVKAIEPDKV-------------IYEDLNGNTHEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp TTCEEECSCEEEEECSSEE-------------EEECTTSCEEEEECSEEEEECEEECC
T ss_pred CCeEEEeCceEEEEeCCce-------------EEEeeCCCceEeecceEEEeccCCCc
Confidence 99999987 8888876542 233323 458999999999998764
No 303
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.43 E-value=0.015 Score=61.82 Aligned_cols=38 Identities=32% Similarity=0.433 Sum_probs=32.9
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
..++++|||+|++|+.+|.+|.+ +.+.+|+|||++...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~-----~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTE-----NPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHT-----STTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHh-----CCCCcEEEEecCCcc
Confidence 35799999999999999999997 256799999998754
No 304
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.39 E-value=0.018 Score=48.59 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=31.9
Q ss_pred CCCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 76 ~~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
...+.+|+|+|.|.-|...|..|.+. +++|+++|+++
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~------g~~v~vid~~~ 40 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLAS------DIPLVVIETSR 40 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHT------TCCEEEEESCH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCH
Confidence 34567899999999999999999984 55999999876
No 305
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.17 E-value=0.013 Score=61.61 Aligned_cols=38 Identities=26% Similarity=0.304 Sum_probs=32.8
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCc
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~ 120 (513)
+.++++|||+|.+|+.+|.+|.+. ++.+|+|||+++..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~-----~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSED-----PAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTS-----TTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-----CCCCEEEEecCCcC
Confidence 358999999999999999999973 46799999998743
No 306
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.94 E-value=0.034 Score=57.70 Aligned_cols=47 Identities=19% Similarity=0.271 Sum_probs=34.8
Q ss_pred hcCCCeEEEEE-eEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCC
Q 010331 147 LANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPK 204 (513)
Q Consensus 147 ~~~~~v~~~~~-~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~ 204 (513)
+++.|++++.+ .|+.+..+++. ..+.+++|.++++|.||+|+|.+|+
T Consensus 267 l~~~GV~v~~~~~v~~i~~~~~v-----------~~v~~~~g~~i~aD~Vv~a~G~~p~ 314 (493)
T 1y56_A 267 LERWGIDYVHIPNVKRVEGNEKV-----------ERVIDMNNHEYKVDALIFADGRRPD 314 (493)
T ss_dssp HHHHTCEEEECSSEEEEECSSSC-----------CEEEETTCCEEECSEEEECCCEEEC
T ss_pred HHhCCcEEEeCCeeEEEecCCce-----------EEEEeCCCeEEEeCEEEECCCcCcC
Confidence 34568888876 78888654431 1356677889999999999998876
No 307
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.76 E-value=0.038 Score=47.43 Aligned_cols=35 Identities=34% Similarity=0.323 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
...+|+|+|+|.-|..+|..|.+. +++|+++|+++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~------g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS------GHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC------CCeEEEEECCH
Confidence 357899999999999999999884 45999999875
No 308
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.45 E-value=0.034 Score=46.76 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=29.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+++|+|+|+|.-|...|..|.+. +++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~------g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA------GKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCeEEEEECCH
Confidence 46899999999999999999984 55999999864
No 309
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.42 E-value=0.045 Score=44.05 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=29.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|+|+|+|..|..++..|.+.+ .++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g-----~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSS-----NYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCS-----SEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC-----CceEEEEeCCH
Confidence 468999999999999999999843 15999999864
No 310
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=94.31 E-value=0.0063 Score=63.37 Aligned_cols=137 Identities=15% Similarity=0.088 Sum_probs=78.8
Q ss_pred EecEEEEeCCCCCCCCCCCCcc-ccCCCCCCHHHHHHHH-HHHH-----HH-----HhhhH-----------HHHHhcC-
Q 010331 191 EYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVD-RKLS-----EL-----ERRNF-----------ERLEEKG- 246 (513)
Q Consensus 191 ~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~l~-~~l~-----~~-----~~~~v-----------~~l~~~~- 246 (513)
.||.+++++|+.+..+.+++.. +..+..+...+...+. .++. .. .++.| ..|...+
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G~ 116 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLGA 116 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCCC
Confidence 5789999999997655554432 2333444555544431 1111 00 01111 3444444
Q ss_pred cEEEEeccCeecCC-----CC----------------------------hhHHHHHHHHHHhCCcEEEcCceeeEEeccc
Q 010331 247 IVQAINVETTICPT-----GT----------------------------PGNREAALKVLSARKVQLVLGYFVRCIRRVG 293 (513)
Q Consensus 247 ~vtli~~~~~ll~~-----~~----------------------------~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~ 293 (513)
.|++++..+.+... .+ ..+.+.+.+.+++.||++++++.+.++..++
T Consensus 117 ~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~ 196 (497)
T 2bry_A 117 RVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPP 196 (497)
T ss_dssp EEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCC
T ss_pred eEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEec
Confidence 49999987543211 01 2334455677778999999999999997642
Q ss_pred cccccccCCCcccccccccccCCCceEEEecccccCCcc--eEEeeceEEEecCCCCCC
Q 010331 294 EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLES--QIFEADLVLWTVGSKPLL 350 (513)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g--~~i~aD~vi~a~G~~p~~ 350 (513)
+.. +.+.+.+... .+| .++.+|.||.|+|..+..
T Consensus 197 ~~~--------------------~~~~v~~~~~---~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 197 RKG--------------------SGWRAQLQPN---PPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp STT--------------------CCBEEEEESC---CCHHHHTCCBSEEEECCCTTCCC
T ss_pred CCC--------------------CEEEEEEEEC---CCCCEEEEEcCEEEECCCCCccc
Confidence 100 2344444210 033 569999999999998864
No 311
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.10 E-value=0.064 Score=45.82 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=29.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.+|+|+|+|..|...|..|.+. +++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~------g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR------GQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT------TCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC------CCCEEEEECCC
Confidence 46899999999999999999884 55999999864
No 312
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.92 E-value=0.057 Score=44.97 Aligned_cols=33 Identities=27% Similarity=0.251 Sum_probs=29.1
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.+|+|+|+|.-|...|..|.+. +++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~------g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK------GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCH
Confidence 5899999999999999999984 45999999855
No 313
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.45 E-value=0.11 Score=50.59 Aligned_cols=34 Identities=21% Similarity=-0.028 Sum_probs=29.2
Q ss_pred CCeEEEECCCHHHHH-HHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLY-TALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~-aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|.|||.|-+|++ +|+.|.++ +++|++.|.++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~------G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA------GFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT------TCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC------CCEEEEEcCCC
Confidence 478999999999997 77888874 55999999876
No 314
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.31 E-value=0.074 Score=56.58 Aligned_cols=40 Identities=18% Similarity=0.133 Sum_probs=34.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~ 122 (513)
.+++||+|||+|..|...|..|++.| .+|++||+++++..
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g------~~vl~id~~~~~gg 45 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSG------QRVLHVDSRSYYGG 45 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTT------CCEEEECSSSSSCG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCC------CEEEEEcCCCcccC
Confidence 34689999999999999999999955 49999999997643
No 315
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=93.10 E-value=0.086 Score=46.15 Aligned_cols=107 Identities=22% Similarity=0.201 Sum_probs=76.5
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcccCC-chhhhh--hccccCCcchHhHHHHhcCCCeEEEE
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELL--SGEVDAWEIAPRFADLLANTGVQFFK 156 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p-~~~~~~--~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (513)
++|+|||||++|+++|..|++. +.+|+|||+++...... .+..+. .......++...+.+.+++.+++++.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~------g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~ 75 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA------GLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRP 75 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEe
Confidence 5899999999999999999984 45999999987432210 000000 00112235566677778888999998
Q ss_pred EeEEEEeCCCCcCcCCCceeeccceEecCCceEEEecEEEEeCCCCCC
Q 010331 157 DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPK 204 (513)
Q Consensus 157 ~~V~~id~~~~~~~~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~~ 204 (513)
++|+.++.++.. ..+.+++| ++++|.||+|+|..++
T Consensus 76 ~~v~~i~~~~~~-----------~~v~~~~g-~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 76 GVVKGVRDMGGV-----------FEVETEEG-VEKAERLLLCTHKDPT 111 (180)
T ss_dssp CCCCEEEECSSS-----------EEEECSSC-EEEEEEEEECCTTCCH
T ss_pred CEEEEEEEcCCE-----------EEEEECCC-EEEECEEEECCCCCCC
Confidence 888888765421 25777788 8999999999999874
No 316
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.04 E-value=0.091 Score=48.08 Aligned_cols=35 Identities=14% Similarity=0.189 Sum_probs=30.5
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..++|+|||||..|...|..|.+ .+.+|+||+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~------~GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQ------EGAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGG------GCCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH------CCCEEEEECCCC
Confidence 35799999999999999999998 456999999754
No 317
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.81 E-value=0.019 Score=59.01 Aligned_cols=34 Identities=29% Similarity=0.353 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+|+|+|--|.+.|..|.. .+++|++||+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~------~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVG------ENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCS------TTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHH------CCCCEEEEECCH
Confidence 3589999999999999999987 455999999876
No 318
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=92.74 E-value=0.041 Score=55.20 Aligned_cols=88 Identities=14% Similarity=0.080 Sum_probs=52.5
Q ss_pred HHHHHHhhhccccCCCCCeEEEEeCCCCcccCCchhhhhhccccCCcchHhHHHHhcCCCeEEEEE-eEEEEeCCCCcCc
Q 010331 92 LYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGV 170 (513)
Q Consensus 92 l~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~-~V~~id~~~~~~~ 170 (513)
+.+|..+++.+ .+.+|++++..+.+...+.+.. .+...+...+++.+++++.+ ++..++.+.+
T Consensus 170 ~~~a~~~~~~~----~~~~v~i~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~--- 233 (401)
T 3vrd_B 170 SQIAHYLKAHK----SKSKVIILDNSQTFSKQAQFTK---------GWERLYGFGTENALIEWHPGPDAAVVKTDTE--- 233 (401)
T ss_dssp HHHHHHHHHHC----TTCEEEEECSSSSCTTHHHHHH---------HHHHHSCTTSTTCSEEEECTTTTCEEEEETT---
T ss_pred HHHHHHHHhcC----CCCEEEEEcccccccccccccH---------HHHHHHHHHHHhcCcEEEeCceEEEEEeccc---
Confidence 34455555543 4569999998774322221111 11122223455678998875 4544443322
Q ss_pred CCCceeeccceEecCCceEEEecEEEEeCCCCC
Q 010331 171 NGPMACTHGGTVLLESGLIVEYDWLVLSLGAEP 203 (513)
Q Consensus 171 ~~~~v~~~~~~v~~~~g~~i~yD~LVlAtGs~~ 203 (513)
...+.+++|++++||.+++++|.++
T Consensus 234 --------~~~v~~~~g~~i~~D~vi~~~g~~~ 258 (401)
T 3vrd_B 234 --------AMTVETSFGETFKAAVINLIPPQRA 258 (401)
T ss_dssp --------TTEEEETTSCEEECSEEEECCCEEE
T ss_pred --------ceEEEcCCCcEEEeeEEEEecCcCC
Confidence 1258889999999999999998765
No 319
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.52 E-value=0.11 Score=43.26 Aligned_cols=34 Identities=26% Similarity=0.305 Sum_probs=29.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|+|+|+|.-|...|..|.+. +++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~------g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRM------GHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT------TCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 35799999999999999999984 45899999864
No 320
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.43 E-value=0.16 Score=51.99 Aligned_cols=34 Identities=24% Similarity=0.218 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|.|||.|.+|+++|+.|.++ +++|++.|.++
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~------G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKL------GAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHT------TCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC------CCEEEEEeCCc
Confidence 57999999999999999999985 55999999876
No 321
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.06 E-value=0.14 Score=45.05 Aligned_cols=35 Identities=23% Similarity=0.132 Sum_probs=29.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+|+|.|.-|..+|..|.+. .+++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~-----~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRAR-----YGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHH-----HCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----cCCeEEEEECCH
Confidence 45899999999999999999884 045999999865
No 322
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.58 E-value=0.13 Score=48.67 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|+|||||-.|...+..|.+. +.+|+||+++.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~------Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPT------GCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGG------TCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhC------CCEEEEEcCCC
Confidence 57999999999999999999984 55999999754
No 323
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=91.40 E-value=0.36 Score=48.70 Aligned_cols=57 Identities=14% Similarity=0.167 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEE
Q 010331 263 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLW 342 (513)
Q Consensus 263 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~ 342 (513)
..+.+.+.+.+++.||+++++++|+++..++ +.+.+++. ++ ++.||.||.
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~-----------------------~~~~V~~~------~g-~i~ad~VIl 181 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTA-----------------------SGFRVTTS------AG-TVDAASLVV 181 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEET-----------------------TEEEEEET------TE-EEEESEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeC-----------------------CEEEEEEC------Cc-EEEeeEEEE
Confidence 4566677788888999999999999997654 44556542 44 899999999
Q ss_pred ecCCCCC
Q 010331 343 TVGSKPL 349 (513)
Q Consensus 343 a~G~~p~ 349 (513)
|+|..+.
T Consensus 182 AtG~~S~ 188 (417)
T 3v76_A 182 ASGGKSI 188 (417)
T ss_dssp CCCCSSC
T ss_pred CCCCccC
Confidence 9999864
No 324
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=91.37 E-value=0.34 Score=47.27 Aligned_cols=61 Identities=15% Similarity=0.068 Sum_probs=44.8
Q ss_pred ChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEE
Q 010331 262 TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVL 341 (513)
Q Consensus 262 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi 341 (513)
+..+.+.+.+.+++.|++++++++|+++..+++ +.+.+.+. ++ +..++.||.||
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~----------------------~~~~v~~~---~g-~~~~~~a~~VV 202 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPE----------------------GGFELDFG---GA-EPMTLSCRVLI 202 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT----------------------SSEEEEEC---TT-SCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC----------------------ceEEEEEC---CC-ceeEEEeCEEE
Confidence 345666777888999999999999999987542 22445442 11 22589999999
Q ss_pred EecCCCC
Q 010331 342 WTVGSKP 348 (513)
Q Consensus 342 ~a~G~~p 348 (513)
+|+|...
T Consensus 203 ~A~G~~s 209 (369)
T 3dme_A 203 NAAGLHA 209 (369)
T ss_dssp ECCGGGH
T ss_pred ECCCcch
Confidence 9999864
No 325
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=91.37 E-value=0.41 Score=50.08 Aligned_cols=58 Identities=10% Similarity=0.021 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCce-EEEecccccCCcceEEeeceEE
Q 010331 263 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVL 341 (513)
Q Consensus 263 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~~~~~~~~~~g~~i~aD~vi 341 (513)
..+.+.+.+.+++.|++++++++|+++..++ +.+ .+.+. +++++.||.||
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~-----------------------~~v~gV~l~------~G~~i~Ad~VV 270 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMED-----------------------GQITGVTLS------NGEEIKSRHVV 270 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESS-----------------------SBEEEEEET------TSCEEECSCEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC-----------------------CEEEEEEEC------CCCEEECCEEE
Confidence 4455666778888999999999999997654 222 24443 67789999999
Q ss_pred EecCCCCC
Q 010331 342 WTVGSKPL 349 (513)
Q Consensus 342 ~a~G~~p~ 349 (513)
+|+|..+.
T Consensus 271 lA~G~~s~ 278 (549)
T 3nlc_A 271 LAVGHSAR 278 (549)
T ss_dssp ECCCTTCH
T ss_pred ECCCCChh
Confidence 99999884
No 326
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=91.28 E-value=0.2 Score=46.05 Aligned_cols=38 Identities=16% Similarity=0.134 Sum_probs=32.5
Q ss_pred CCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCC
Q 010331 381 GHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 427 (513)
Q Consensus 381 ~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~ 427 (513)
+.++||++||++.. ..+..|+..|..+|+.|...|++.
T Consensus 293 ~~~~v~l~GDa~~g---------~gv~~A~~sG~~aA~~I~~~L~~e 330 (336)
T 3kkj_A 293 ADLGIYVCGDWCLS---------GRVEGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp TTTTEEECCGGGTT---------SSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred CCCCEEEEecccCC---------cCHHHHHHHHHHHHHHHHHHhhcc
Confidence 67899999999763 357899999999999999998764
No 327
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.15 E-value=0.31 Score=49.26 Aligned_cols=58 Identities=16% Similarity=0.101 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHHhCCcEEEcCc---eeeEEeccccccccccCCCcccccccccccCCCceE-EEecccccCCcceEEeec
Q 010331 263 PGNREAALKVLSARKVQLVLGY---FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI-LELQPAIKGLESQIFEAD 338 (513)
Q Consensus 263 ~~~~~~~~~~l~~~gV~v~~~~---~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~~~~~~~~g~~i~aD 338 (513)
..+...+.+.+++.|++|++++ .|+++..++ +.+. +++. +|+++.||
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~-----------------------~~v~gV~t~------~G~~i~Ad 211 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN-----------------------NDVKGAVTA------DGKIWRAE 211 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET-----------------------TEEEEEEET------TTEEEECS
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC-----------------------CeEEEEEEC------CCCEEECC
Confidence 4555667778889999999999 999997644 3444 5543 67789999
Q ss_pred eEEEecCCCCC
Q 010331 339 LVLWTVGSKPL 349 (513)
Q Consensus 339 ~vi~a~G~~p~ 349 (513)
.||+|+|....
T Consensus 212 ~VV~AtG~~s~ 222 (438)
T 3dje_A 212 RTFLCAGASAG 222 (438)
T ss_dssp EEEECCGGGGG
T ss_pred EEEECCCCChh
Confidence 99999998754
No 328
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=91.10 E-value=0.39 Score=47.86 Aligned_cols=58 Identities=12% Similarity=0.248 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHHhC-CcEEEcCceeeEEeccccccccccCCCcccccccccccCCCce--EEEecccccCCcceEEeece
Q 010331 263 PGNREAALKVLSAR-KVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKY--ILELQPAIKGLESQIFEADL 339 (513)
Q Consensus 263 ~~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~v~~~~~~~~~~g~~i~aD~ 339 (513)
..+.+.+.+.+++. |++++++++++++..++ +++ .+++. +|+++.+|+
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~-----------------------~~v~g~v~~~------~g~~~~ad~ 157 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRDE-----------------------RHAIDQVRLN------DGRVLRPRV 157 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEECT-----------------------TSCEEEEEET------TSCEEEEEE
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC-----------------------CceEEEEEEC------CCCEEECCE
Confidence 34555666777777 99999999999998754 344 55543 566899999
Q ss_pred EEEecCCCCC
Q 010331 340 VLWTVGSKPL 349 (513)
Q Consensus 340 vi~a~G~~p~ 349 (513)
||.|+|....
T Consensus 158 vV~AdG~~s~ 167 (399)
T 2x3n_A 158 VVGADGIASY 167 (399)
T ss_dssp EEECCCTTCH
T ss_pred EEECCCCChH
Confidence 9999998764
No 329
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.96 E-value=0.16 Score=46.23 Aligned_cols=32 Identities=25% Similarity=0.493 Sum_probs=28.7
Q ss_pred eEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 81 ~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+|+|+|+|.-|...|..|.+ .+++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~------~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLS------RKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHH------TTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHh------CCCeEEEEECCH
Confidence 69999999999999999998 455999999865
No 330
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=90.93 E-value=0.14 Score=52.04 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|+|||.|.+|+++|+.|.+. +++|+++|.+.
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~------G~~v~~~D~~~ 38 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLAR------GVTPRVMDTRM 38 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTT------TCCCEEEESSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhC------CCEEEEEECCC
Confidence 46899999999999999999874 55999999876
No 331
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=90.70 E-value=0.42 Score=43.81 Aligned_cols=122 Identities=12% Similarity=0.006 Sum_probs=75.9
Q ss_pred hHHHHHHHHHHhC-CcEEEcCceeeEEeccccccccccCCCcccccccccccCCCce-EEEecccccCCcceEEeeceEE
Q 010331 264 GNREAALKVLSAR-KVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVL 341 (513)
Q Consensus 264 ~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~~~~~~~~~~g~~i~aD~vi 341 (513)
.+.+.+.+.+++. |++++ ++.++++..++ +.+ .+.+. +|+++++|.||
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~-----------------------~~v~~v~~~------~g~~i~a~~VV 118 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEG-----------------------NRVVGVRTW------EGPPARGEKVV 118 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-----------------------TEEEEEEET------TSCCEECSEEE
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC-----------------------CEEEEEEEC------CCCEEECCEEE
Confidence 5556677888886 99998 56888887643 222 24332 56689999999
Q ss_pred EecCCCCCCCCCCCCC------------------CccCCCccCCC--------CC-------eEeC------CCccccCC
Q 010331 342 WTVGSKPLLPHVEPPN------------------NRLHDLPLNAR--------GQ-------AETD------ETLCVKGH 382 (513)
Q Consensus 342 ~a~G~~p~~~~l~~~~------------------~~~~~~~~~~~--------G~-------i~Vd------~~l~~~~~ 382 (513)
+|+|..++........ +...+++++.. |. ..+. ..+..+++
T Consensus 119 ~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~ 198 (232)
T 2cul_A 119 LAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRL 198 (232)
T ss_dssp ECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTS
T ss_pred ECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCcccccccc
Confidence 9999966532110000 00011111100 00 0011 01221379
Q ss_pred CCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 010331 383 PRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAI 424 (513)
Q Consensus 383 p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l 424 (513)
|+|||+|||+ . ..+++.|++||+.+|.||.+.+
T Consensus 199 p~iya~G~~a-~--------~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 199 EGLYAVGLCV-R--------EGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp BSEEECGGGT-S--------CCCHHHHHHHHHHHHHHHHHHC
T ss_pred ccceeeeecc-c--------CccHHHHHHHHHHHHHHHHhhc
Confidence 9999999999 6 3488899999999999999875
No 332
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=90.35 E-value=0.59 Score=46.80 Aligned_cols=63 Identities=13% Similarity=0.208 Sum_probs=45.3
Q ss_pred CChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceE
Q 010331 261 GTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLV 340 (513)
Q Consensus 261 ~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~v 340 (513)
....+.+.+.+.+++.||++++++.++++..+++.. .+.+.+++. ++ ++.||.|
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~-------------------~~~~~v~~~------~g-~i~ad~V 160 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDE-------------------KVRFVLQVN------ST-QWQCKNL 160 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCS-------------------SCCEEEEET------TE-EEEESEE
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcC-------------------CCeEEEEEC------CC-EEECCEE
Confidence 345666777788888999999999999987541000 033555432 34 7999999
Q ss_pred EEecCCCCC
Q 010331 341 LWTVGSKPL 349 (513)
Q Consensus 341 i~a~G~~p~ 349 (513)
|.|+|..+.
T Consensus 161 VlAtG~~s~ 169 (401)
T 2gqf_A 161 IVATGGLSM 169 (401)
T ss_dssp EECCCCSSC
T ss_pred EECCCCccC
Confidence 999999985
No 333
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=90.27 E-value=0.37 Score=47.42 Aligned_cols=57 Identities=16% Similarity=0.161 Sum_probs=43.4
Q ss_pred ChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEE
Q 010331 262 TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVL 341 (513)
Q Consensus 262 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi 341 (513)
+..+...+.+.+++.|++++.++.|+++..++ +.+.+++. +| ++.||.||
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-----------------------~~~~V~t~------~g-~i~a~~VV 202 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVD-----------------------GAWEVRCD------AG-SYRAAVLV 202 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEET-----------------------TEEEEECS------SE-EEEESEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC-----------------------CeEEEEeC------CC-EEEcCEEE
Confidence 34556667788889999999999999998754 34555532 44 79999999
Q ss_pred EecCCCC
Q 010331 342 WTVGSKP 348 (513)
Q Consensus 342 ~a~G~~p 348 (513)
+|+|...
T Consensus 203 ~A~G~~s 209 (381)
T 3nyc_A 203 NAAGAWC 209 (381)
T ss_dssp ECCGGGH
T ss_pred ECCChhH
Confidence 9999753
No 334
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.26 E-value=0.29 Score=48.84 Aligned_cols=34 Identities=24% Similarity=0.360 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+|||+|.+|+.+|..+... +.+|+++|+++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL------GAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCEEEEEcCCH
Confidence 46999999999999999999885 45999999876
No 335
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=89.92 E-value=0.32 Score=47.96 Aligned_cols=35 Identities=29% Similarity=0.519 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
+++|+|||||.-|..+++.++++ |++++++|+++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~------G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKA------GMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCCC
Confidence 47999999999999999999885 459999998763
No 336
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=89.74 E-value=0.56 Score=46.23 Aligned_cols=57 Identities=9% Similarity=-0.027 Sum_probs=43.1
Q ss_pred ChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceE-EEecccccCCcceEEeeceE
Q 010331 262 TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI-LELQPAIKGLESQIFEADLV 340 (513)
Q Consensus 262 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~~~~~~~~g~~i~aD~v 340 (513)
+..+.+.+.+.+++.|++++.++.|+++..++ +.+. +++. ++ ++.||.|
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-----------------------~~v~gv~~~------~g-~i~a~~V 197 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIEN-----------------------NEIKGVKTN------KG-IIKTGIV 197 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-----------------------SBEEEEEET------TE-EEECSEE
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEEC-----------------------CEEEEEEEC------Cc-EEECCEE
Confidence 34556667788888999999999999998654 3343 4432 44 7999999
Q ss_pred EEecCCCC
Q 010331 341 LWTVGSKP 348 (513)
Q Consensus 341 i~a~G~~p 348 (513)
|+|+|...
T Consensus 198 V~A~G~~s 205 (382)
T 1y56_B 198 VNATNAWA 205 (382)
T ss_dssp EECCGGGH
T ss_pred EECcchhH
Confidence 99999864
No 337
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.63 E-value=0.72 Score=45.54 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=29.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQS 117 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~ 117 (513)
..+|||+|+|-+|..+|+.|...|. -+|+++|++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~-----~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGV-----KNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEECC
Confidence 4799999999999999999998643 289999997
No 338
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.61 E-value=0.31 Score=48.22 Aligned_cols=35 Identities=29% Similarity=0.341 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|||+|+|-||+.+|..|...|. -+|+++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga-----~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGA-----TKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCC-----CeEEEEECCC
Confidence 4699999999999999999988543 1999999874
No 339
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.58 E-value=0.32 Score=48.15 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+|||+|..|+.+|..|...| .+|+++|+++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lG------a~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLG------AKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHT------CEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCC------CEEEEEeCCH
Confidence 479999999999999999999864 4999999876
No 340
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=89.52 E-value=0.61 Score=45.99 Aligned_cols=70 Identities=13% Similarity=0.077 Sum_probs=48.9
Q ss_pred EEEEeccCeecCCCChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccc
Q 010331 248 VQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAI 327 (513)
Q Consensus 248 vtli~~~~~ll~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~ 327 (513)
..++......+. +..+.+.+.+.+++.|++++.++.|+++..++ +++.+++.
T Consensus 137 ~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~--- 188 (389)
T 2gf3_A 137 NAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISP-----------------------DSVKIETA--- 188 (389)
T ss_dssp EEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECS-----------------------SCEEEEET---
T ss_pred eEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecC-----------------------CeEEEEeC---
Confidence 344444333332 35666777788889999999999999998754 34445432
Q ss_pred cCCcceEEeeceEEEecCCCCC
Q 010331 328 KGLESQIFEADLVLWTVGSKPL 349 (513)
Q Consensus 328 ~~~~g~~i~aD~vi~a~G~~p~ 349 (513)
++ ++.+|.||+|+|...+
T Consensus 189 ---~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 189 ---NG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp ---TE-EEEEEEEEECCGGGHH
T ss_pred ---CC-EEEeCEEEEecCccHH
Confidence 33 7999999999998754
No 341
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=89.49 E-value=0.7 Score=46.94 Aligned_cols=57 Identities=23% Similarity=0.236 Sum_probs=43.6
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCc-eEEEecccccCCcceEEeeceEE
Q 010331 263 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDK-YILELQPAIKGLESQIFEADLVL 341 (513)
Q Consensus 263 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~~~~~~~~g~~i~aD~vi 341 (513)
..+.+.+.+.+++.||++++++.|+++..++ +. +.+++. +|+++.||.||
T Consensus 134 ~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-----------------------~~v~~V~~~------~G~~i~Ad~VV 184 (447)
T 2i0z_A 134 QSVVDALLTRLKDLGVKIRTNTPVETIEYEN-----------------------GQTKAVILQ------TGEVLETNHVV 184 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-----------------------TEEEEEEET------TCCEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-----------------------CcEEEEEEC------CCCEEECCEEE
Confidence 4555667778888999999999999997643 22 344442 55679999999
Q ss_pred EecCCCC
Q 010331 342 WTVGSKP 348 (513)
Q Consensus 342 ~a~G~~p 348 (513)
+|+|..+
T Consensus 185 lAtGg~s 191 (447)
T 2i0z_A 185 IAVGGKS 191 (447)
T ss_dssp ECCCCSS
T ss_pred ECCCCCc
Confidence 9999887
No 342
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.36 E-value=0.44 Score=45.62 Aligned_cols=34 Identities=32% Similarity=0.468 Sum_probs=30.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|.|||+|.-|...|..|++ .+++|+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~------~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAA------TGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCeEEEEECCH
Confidence 3689999999999999999998 456999999876
No 343
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=88.97 E-value=0.59 Score=46.01 Aligned_cols=58 Identities=14% Similarity=-0.016 Sum_probs=44.1
Q ss_pred ChhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEE
Q 010331 262 TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVL 341 (513)
Q Consensus 262 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi 341 (513)
+..+.+.+.+.+++.|++++.++.|.++..++ +.+.+++. ++ ++.+|.||
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-----------------------~~~~v~~~------~g-~~~a~~vV 212 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERDG-----------------------EALFIKTP------SG-DVWANHVV 212 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEECSS-----------------------SSEEEEET------TE-EEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC-----------------------CEEEEEcC------Cc-eEEcCEEE
Confidence 35566777788889999999999999997654 34444432 44 79999999
Q ss_pred EecCCCCC
Q 010331 342 WTVGSKPL 349 (513)
Q Consensus 342 ~a~G~~p~ 349 (513)
+|+|....
T Consensus 213 ~A~G~~s~ 220 (382)
T 1ryi_A 213 VASGVWSG 220 (382)
T ss_dssp ECCGGGTH
T ss_pred ECCChhHH
Confidence 99998653
No 344
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.93 E-value=0.42 Score=45.00 Aligned_cols=35 Identities=9% Similarity=0.102 Sum_probs=29.9
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
|+++|+|.|+|+-|-..+..|.+. +++|+++++++
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQ------GWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGG------TCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHC------CCEEEEEEcCh
Confidence 457899999999999999999984 45999998865
No 345
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=88.85 E-value=0.56 Score=50.47 Aligned_cols=58 Identities=16% Similarity=0.230 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEE
Q 010331 263 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLW 342 (513)
Q Consensus 263 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~ 342 (513)
..+...+.+.+++.|+++++++.|+++..++ +++.+++. +|.++.+|.||+
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-----------------------~~v~V~t~------~G~~i~Ad~VVl 467 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKD-----------------------DCWLLNFA------GDQQATHSVVVL 467 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEET-----------------------TEEEEEET------TSCEEEESEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC-----------------------CeEEEEEC------CCCEEECCEEEE
Confidence 4555666777888999999999999998754 44555542 556799999999
Q ss_pred ecCCCCC
Q 010331 343 TVGSKPL 349 (513)
Q Consensus 343 a~G~~p~ 349 (513)
|+|....
T Consensus 468 AtG~~s~ 474 (676)
T 3ps9_A 468 ANGHQIS 474 (676)
T ss_dssp CCGGGGG
T ss_pred CCCcchh
Confidence 9998754
No 346
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=88.72 E-value=0.78 Score=47.12 Aligned_cols=38 Identities=24% Similarity=0.375 Sum_probs=32.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~ 122 (513)
.++|+|||||++||+||..|++. +++|+|+|+++....
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~------g~~v~v~E~~~~~GG 76 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVA------GFKTLLLEARDRIGG 76 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHT------TCCEEEECSSSBSBT
T ss_pred CCCEEEECCcHHHHHHHHHHHHC------CCCEEEEeCCCCCCC
Confidence 37999999999999999999984 569999999885543
No 347
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=88.71 E-value=0.73 Score=45.17 Aligned_cols=57 Identities=12% Similarity=0.105 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEE
Q 010331 263 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLW 342 (513)
Q Consensus 263 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~ 342 (513)
..+.+.+.+.+++.|++++.+++|+++..++ +.+.+++. ++ ++.+|.||+
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-----------------------~~~~v~~~------~g-~~~a~~vV~ 198 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHDD-----------------------DGVTIETA------DG-EYQAKKAIV 198 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECS-----------------------SSEEEEES------SC-EEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEcC-----------------------CEEEEEEC------CC-eEEcCEEEE
Confidence 4555667778888999999999999998654 34445432 44 499999999
Q ss_pred ecCCCCC
Q 010331 343 TVGSKPL 349 (513)
Q Consensus 343 a~G~~p~ 349 (513)
|+|....
T Consensus 199 a~G~~s~ 205 (372)
T 2uzz_A 199 CAGTWVK 205 (372)
T ss_dssp CCGGGGG
T ss_pred cCCccHH
Confidence 9997643
No 348
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=88.70 E-value=0.44 Score=46.09 Aligned_cols=34 Identities=24% Similarity=0.278 Sum_probs=29.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|.|||+|.-|...|..|.+. +.+|+++++++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKT------GHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHT------TCEEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCh
Confidence 36899999999999999999984 55999999865
No 349
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=88.57 E-value=0.99 Score=44.52 Aligned_cols=55 Identities=20% Similarity=0.160 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEE
Q 010331 263 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLW 342 (513)
Q Consensus 263 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~ 342 (513)
..+.+.+.+.+.+.||+++.++++++++. + + .+++. +|+++.+|+||.
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-----------------------~--~v~~~------~g~~~~ad~vV~ 154 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP-V-----------------------G--RLTLQ------TGEVLEADLIVG 154 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET-T-----------------------T--EEEET------TSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-----------------------C--EEEEC------CCCEEEcCEEEE
Confidence 44556677778889999999999999876 2 3 34443 567899999999
Q ss_pred ecCCCCC
Q 010331 343 TVGSKPL 349 (513)
Q Consensus 343 a~G~~p~ 349 (513)
|+|..+.
T Consensus 155 AdG~~s~ 161 (379)
T 3alj_A 155 ADGVGSK 161 (379)
T ss_dssp CCCTTCH
T ss_pred CCCccHH
Confidence 9998764
No 350
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=88.50 E-value=0.5 Score=46.04 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=29.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~~ 118 (513)
+.+|+|||+|.-|.+.|..|+.. ++ +|+|+|.++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~------g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALR------ELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCh
Confidence 35899999999999999999984 33 799999875
No 351
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=88.35 E-value=0.48 Score=45.71 Aligned_cols=34 Identities=18% Similarity=0.358 Sum_probs=29.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCC--eEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~--~V~lIe~~~ 118 (513)
..+|+|||+|..|...|..|.+ .++ +|+++|+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~------~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQ------RGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCCCEEEEEeCCh
Confidence 3589999999999999999988 445 899999864
No 352
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.10 E-value=0.36 Score=40.55 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=29.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|+|||+|..|...|..|.+ .+++|+++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~------~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSY------PQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCT------TTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCEEEEEcCCH
Confidence 4689999999999999999887 455899999865
No 353
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.03 E-value=0.54 Score=42.91 Aligned_cols=35 Identities=20% Similarity=0.292 Sum_probs=29.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.++|+|.|| |+-|..++..|.+ .+++|+++++++
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~------~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKN------KGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH------TTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHh------CCCeEEEEECCh
Confidence 3578999998 9999999999998 456999999865
No 354
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=87.80 E-value=0.66 Score=50.10 Aligned_cols=58 Identities=12% Similarity=0.150 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcce-EEeeceEE
Q 010331 263 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQ-IFEADLVL 341 (513)
Q Consensus 263 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~-~i~aD~vi 341 (513)
..+...+.+.+++.|++|++++.|+++..++ +++.+++. +|. ++.+|.||
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-----------------------~~v~V~t~------~G~~~i~Ad~VV 462 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRID-----------------------SQWQLTFG------QSQAAKHHATVI 462 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECS-----------------------SSEEEEEC-------CCCCEEESEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC-----------------------CeEEEEeC------CCcEEEECCEEE
Confidence 4555666777888999999999999998754 44555542 455 79999999
Q ss_pred EecCCCCC
Q 010331 342 WTVGSKPL 349 (513)
Q Consensus 342 ~a~G~~p~ 349 (513)
+|+|....
T Consensus 463 lAtG~~s~ 470 (689)
T 3pvc_A 463 LATGHRLP 470 (689)
T ss_dssp ECCGGGTT
T ss_pred ECCCcchh
Confidence 99998754
No 355
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.72 E-value=0.43 Score=46.16 Aligned_cols=34 Identities=26% Similarity=0.255 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|.|||+|.-|-..|..++. .|++|+|+|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~------~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFAS------GGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH------TTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHh------CCCeEEEEECCH
Confidence 4689999999999999999998 556999999876
No 356
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=87.71 E-value=0.51 Score=48.19 Aligned_cols=34 Identities=18% Similarity=0.061 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|+|||||-.|...+..|.+ .+.+|+||+++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~------~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLE------AGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH------TTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CcCEEEEEcCCC
Confidence 4789999999999999999998 456999999854
No 357
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=87.56 E-value=0.52 Score=47.22 Aligned_cols=34 Identities=24% Similarity=0.347 Sum_probs=29.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+|||+|.+|+.+|..+..+ +.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~------Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL------GAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCH
Confidence 46899999999999999999885 44999999876
No 358
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=87.29 E-value=1.7 Score=43.01 Aligned_cols=60 Identities=7% Similarity=0.034 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcce--EEeeceEE
Q 010331 264 GNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQ--IFEADLVL 341 (513)
Q Consensus 264 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~--~i~aD~vi 341 (513)
.+.+.+.+.+.+.|++++++++++++..+++ +.+.+++. .+|+ ++.+|+||
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~----------------------~~~~v~~~-----~~g~~~~~~a~~vV 156 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQG----------------------ERPYVTFE-----RDGERLRLDCDYIA 156 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTS----------------------SSCEEEEE-----ETTEEEEEECSEEE
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecC----------------------CceEEEEe-----cCCcEEEEEeCEEE
Confidence 3445556667778999999999999976431 23444441 1454 79999999
Q ss_pred EecCCCCCC
Q 010331 342 WTVGSKPLL 350 (513)
Q Consensus 342 ~a~G~~p~~ 350 (513)
.|.|.....
T Consensus 157 ~AdG~~S~v 165 (394)
T 1k0i_A 157 GCDGFHGIS 165 (394)
T ss_dssp ECCCTTCST
T ss_pred ECCCCCcHH
Confidence 999998653
No 359
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=87.24 E-value=0.68 Score=45.00 Aligned_cols=34 Identities=35% Similarity=0.443 Sum_probs=29.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~~ 118 (513)
+.+|.|||+|.-|...|..|+. .++ +|+|+|.++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~------~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQ------KDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCCeEEEEECCH
Confidence 4689999999999999999998 344 899999875
No 360
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=86.97 E-value=0.69 Score=44.55 Aligned_cols=35 Identities=34% Similarity=0.505 Sum_probs=29.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.+|.|||+|..|...|..|+..++ ++|+|+|.++
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~-----~~v~L~Di~~ 36 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKEL-----GDIVLLDIVE 36 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-----CeEEEEeCCc
Confidence 3689999999999999999987421 3799999865
No 361
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=86.96 E-value=0.65 Score=46.24 Aligned_cols=34 Identities=24% Similarity=0.378 Sum_probs=29.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+|+|+|.+|+.++..+... +.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~------Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRL------GAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 57999999999999999999885 44899999875
No 362
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=86.79 E-value=0.65 Score=47.30 Aligned_cols=33 Identities=27% Similarity=0.422 Sum_probs=29.7
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.+|.|||.|+-|+..|..|++. +++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~------G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL------GANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhc------CCEEEEEECCH
Confidence 5899999999999999999984 55999999875
No 363
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=86.69 E-value=0.85 Score=46.11 Aligned_cols=39 Identities=21% Similarity=0.247 Sum_probs=32.7
Q ss_pred CCCCCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 74 WPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 74 ~~~~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+...++.+|.|||.|+.|+..|..|++.| ++|+.+|-++
T Consensus 16 p~~~~m~~IaViGlGYVGLp~A~~~A~~G------~~V~g~Did~ 54 (444)
T 3vtf_A 16 PRGSHMASLSVLGLGYVGVVHAVGFALLG------HRVVGYDVNP 54 (444)
T ss_dssp CTTCCCCEEEEECCSHHHHHHHHHHHHHT------CEEEEECSCH
T ss_pred CCCCCCCEEEEEccCHHHHHHHHHHHhCC------CcEEEEECCH
Confidence 33445679999999999999999999854 4999999865
No 364
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=86.69 E-value=0.61 Score=44.22 Aligned_cols=34 Identities=21% Similarity=0.185 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|.|||+|.-|...|..|++ .+++|+++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~------~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAF------HGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCH
Confidence 3689999999999999999998 456999999876
No 365
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.45 E-value=0.61 Score=43.39 Aligned_cols=35 Identities=26% Similarity=0.196 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+|||+|-.|..+|..|.+.|. -+|+|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv-----~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGV-----GNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCC-----CeEEEEcCCC
Confidence 3689999999999999999999643 2899999875
No 366
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=86.43 E-value=0.51 Score=45.44 Aligned_cols=34 Identities=29% Similarity=0.407 Sum_probs=28.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|.|||+|--|...|..|.+. +.+|+++++++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~ 35 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRS------GEDVHFLLRRD 35 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHT------SCCEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHC------CCeEEEEEcCc
Confidence 35899999999999999999984 45999999854
No 367
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=86.25 E-value=0.81 Score=43.98 Aligned_cols=36 Identities=17% Similarity=0.134 Sum_probs=31.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+.+|.|||.|.-|...|..|.+. +++|+++|+++
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~------G~~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKN------GFKVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHC------CCeEEEEeCCH
Confidence 3457899999999999999999984 55999999866
No 368
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=86.20 E-value=1.1 Score=44.48 Aligned_cols=55 Identities=18% Similarity=0.172 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEe
Q 010331 264 GNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWT 343 (513)
Q Consensus 264 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a 343 (513)
.+...+.+.+++.|++++.++.|.++..++ +++.+++ ++.++.+|.||.|
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-----------------------~~v~v~t-------~~g~i~a~~VV~A 203 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDA-----------------------DGVSVTT-------DRGTYRAGKVVLA 203 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEET-----------------------TEEEEEE-------SSCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcC-----------------------CeEEEEE-------CCCEEEcCEEEEc
Confidence 445556677788999999999999997644 3455543 2237999999999
Q ss_pred cCCCC
Q 010331 344 VGSKP 348 (513)
Q Consensus 344 ~G~~p 348 (513)
+|...
T Consensus 204 ~G~~s 208 (397)
T 2oln_A 204 CGPYT 208 (397)
T ss_dssp CGGGH
T ss_pred CCcCh
Confidence 99763
No 369
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=86.08 E-value=0.88 Score=40.93 Aligned_cols=35 Identities=20% Similarity=0.199 Sum_probs=29.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
..+|.|||+|.-|.+.|..|.+. +++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~------g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA------GHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH
Confidence 46899999999999999999984 459999998763
No 370
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=86.07 E-value=0.59 Score=47.04 Aligned_cols=34 Identities=26% Similarity=0.232 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.+|+|||.|.-|..+|..|.+ .+++|++||.++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~------~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS------SGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH------TTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHH------CCCCEEEEECCH
Confidence 3579999999999999999998 456999999876
No 371
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=85.94 E-value=0.8 Score=44.29 Aligned_cols=36 Identities=22% Similarity=0.446 Sum_probs=28.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.+|+|||+|..|.+.|..|...+. --+++|+|.++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~----~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQT----ANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC----SSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC----CCEEEEEeCCh
Confidence 4689999999999999999988421 12899999764
No 372
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=85.81 E-value=0.78 Score=44.29 Aligned_cols=34 Identities=26% Similarity=0.344 Sum_probs=29.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~~ 118 (513)
+.+|.|||+|.-|...|..|++. ++ +|+|+|.++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~------g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKD------NLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCc
Confidence 36899999999999999999984 44 899999875
No 373
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=85.60 E-value=0.82 Score=43.69 Aligned_cols=33 Identities=30% Similarity=0.308 Sum_probs=29.1
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.+|.|||+|.-|...|..|.+. +++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG------GNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhC------CCcEEEEECCH
Confidence 5899999999999999999984 45999999865
No 374
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=85.54 E-value=0.93 Score=44.65 Aligned_cols=34 Identities=32% Similarity=0.390 Sum_probs=29.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+|+|+|.+|..++..|+.. +.+|+++|+++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~------Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL------GAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 37999999999999999999884 44999999875
No 375
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=85.38 E-value=1 Score=43.63 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=29.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~~ 118 (513)
..+|.|||+|..|...|..|+.. ++ +|+|+|.++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~------g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQK------NLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCH
Confidence 35899999999999999999983 44 799999865
No 376
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=85.08 E-value=1.7 Score=45.10 Aligned_cols=64 Identities=9% Similarity=-0.015 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEE
Q 010331 263 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLW 342 (513)
Q Consensus 263 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~ 342 (513)
..+.+.+.+.+++.|++++++++++++..+++.. ..++.+.+.. +....++.||+||.
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~-------------------~~~v~v~~~~---~~~~~~i~a~~vV~ 177 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDA-------------------GAGVTARLAG---PDGEYDLRAGYLVG 177 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGG-------------------CSEEEEEEEE---TTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCc-------------------cccEEEEEEc---CCCeEEEEeCEEEE
Confidence 3455666777888899999999999998755200 0155555541 11137899999999
Q ss_pred ecCCCC
Q 010331 343 TVGSKP 348 (513)
Q Consensus 343 a~G~~p 348 (513)
|.|...
T Consensus 178 AdG~~S 183 (535)
T 3ihg_A 178 ADGNRS 183 (535)
T ss_dssp CCCTTC
T ss_pred CCCCcc
Confidence 999864
No 377
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=85.07 E-value=1.3 Score=39.87 Aligned_cols=35 Identities=20% Similarity=0.128 Sum_probs=29.3
Q ss_pred CCCeEEEECC-CHHHHHHHHHhh-hccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGG-GFGGLYTALRLE-SLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGg-G~AGl~aA~~L~-~~~~~~~~~~~V~lIe~~~ 118 (513)
|+++|+|.|| |.-|..++..|. + .+++|+++++++
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~------~g~~V~~~~r~~ 40 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTY------TDMHITLYGRQL 40 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHH------CCCEEEEEESSH
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhc------CCceEEEEecCc
Confidence 3456999995 999999999999 6 566999999864
No 378
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=85.00 E-value=0.91 Score=43.54 Aligned_cols=32 Identities=31% Similarity=0.589 Sum_probs=28.2
Q ss_pred eEEEECCCHHHHHHHHHhhhccccCCCCC--eEEEEeCCC
Q 010331 81 RICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSE 118 (513)
Q Consensus 81 ~VVIVGgG~AGl~aA~~L~~~~~~~~~~~--~V~lIe~~~ 118 (513)
+|+|||+|..|.+.|..|+. .++ +|+|+|.++
T Consensus 2 kI~VIGaG~vG~~la~~la~------~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL------RGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH------TTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh------CCCCCEEEEEeCCH
Confidence 79999999999999999987 344 899999864
No 379
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=84.75 E-value=0.53 Score=43.10 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=28.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.+|+|+|+|.-|...|..|.+ .++ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~------~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRG------SEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTT------SEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHh------CCe-EEEEECCH
Confidence 4689999999999999999986 567 99999865
No 380
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=84.74 E-value=0.74 Score=44.54 Aligned_cols=34 Identities=26% Similarity=0.255 Sum_probs=29.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|.|||+|.-|...|..|++ .+++|+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~------~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFAS------GGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH------TTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 4689999999999999999998 456999999876
No 381
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=84.59 E-value=2 Score=43.98 Aligned_cols=39 Identities=18% Similarity=0.237 Sum_probs=33.7
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~ 122 (513)
..+||+|||+|.+|+++|..|++. +.+|+++|++++...
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~------g~~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHY------GKKILVLDRNPYYGG 57 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC------CCcEEEEeccCCCCC
Confidence 357999999999999999999994 559999999986544
No 382
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=84.40 E-value=1.1 Score=42.34 Aligned_cols=32 Identities=22% Similarity=0.065 Sum_probs=28.7
Q ss_pred eEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 81 ~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+|.|||+|.-|...|..|.+. +++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ------GHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCc
Confidence 799999999999999999984 45999999876
No 383
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=84.35 E-value=1.4 Score=43.60 Aligned_cols=57 Identities=12% Similarity=-0.004 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEE
Q 010331 263 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLW 342 (513)
Q Consensus 263 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~ 342 (513)
..+.+.+.+.+++.|++++.++.|+++..+++ ..+.+++. ++ ++.+|.||+
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~----------------------~~~~v~~~------~g-~~~a~~vV~ 224 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFIKDGE----------------------KVTGVKTT------RG-TIHAGKVAL 224 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSS----------------------BEEEEEET------TC-CEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCC----------------------EEEEEEeC------Cc-eEECCEEEE
Confidence 45666677888899999999999999976431 11234432 34 699999999
Q ss_pred ecCCCC
Q 010331 343 TVGSKP 348 (513)
Q Consensus 343 a~G~~p 348 (513)
|+|...
T Consensus 225 a~G~~s 230 (405)
T 2gag_B 225 AGAGHS 230 (405)
T ss_dssp CCGGGH
T ss_pred CCchhH
Confidence 999865
No 384
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=84.33 E-value=1.2 Score=44.12 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=32.9
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~ 121 (513)
..++++|+|+|+-|...|..+..+++ +|+++|.++.+.
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~------~V~v~D~R~~~~ 240 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGY------RVTVCDARPVFA 240 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTC------EEEEEESCTTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC------EEEEECCchhhc
Confidence 35799999999999999999998654 999999988643
No 385
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=84.33 E-value=2.2 Score=43.98 Aligned_cols=60 Identities=17% Similarity=0.210 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEE
Q 010331 263 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLW 342 (513)
Q Consensus 263 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~ 342 (513)
..+.+.+.+.+++.|++|+.++++++++.++ +++.+++.+ ++..+++.+|+||.
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~-----------------------~~v~v~~~~---~~g~~~~~a~~vVg 160 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDEG-----------------------DHVVVEVEG---PDGPRSLTTRYVVG 160 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEECS-----------------------SCEEEEEEC---SSCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-----------------------CEEEEEEEc---CCCcEEEEeCEEEE
Confidence 3445566677788899999999999998755 455665541 11124799999999
Q ss_pred ecCCCC
Q 010331 343 TVGSKP 348 (513)
Q Consensus 343 a~G~~p 348 (513)
|.|...
T Consensus 161 ADG~~S 166 (499)
T 2qa2_A 161 CDGGRS 166 (499)
T ss_dssp CCCTTC
T ss_pred ccCccc
Confidence 999875
No 386
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=84.33 E-value=1.3 Score=46.93 Aligned_cols=48 Identities=21% Similarity=0.051 Sum_probs=40.6
Q ss_pred eCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCCC
Q 010331 373 TDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPL 429 (513)
Q Consensus 373 Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~~ 429 (513)
.+++|+++..||+|++|+++.. .-...|..||.+++.|....+.++++
T Consensus 380 l~~tLe~k~~~gLf~AGqinGt---------~GyeEAaaqGl~AG~nAa~~~~~~~~ 427 (637)
T 2zxi_A 380 LYPTLETKKIRGLFHAGNFNGT---------TGYEEAAGQGIVAGINAALRAFGKEP 427 (637)
T ss_dssp BCTTSBBSSSBTEEECGGGGTB---------CSHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCccccccCCCCEEEeeecCCc---------chHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3478899889999999999985 23458899999999999999998764
No 387
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=84.29 E-value=0.9 Score=44.06 Aligned_cols=36 Identities=19% Similarity=0.117 Sum_probs=28.8
Q ss_pred CCCCeEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 77 KKKPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 77 ~~~~~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
...++|+|.|| |+-|...+..|.+. +++|+++++.+
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~------G~~V~~~~r~~ 53 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQ------GRTVRGFDLRP 53 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHT------TCCEEEEESSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhC------CCEEEEEeCCC
Confidence 34578999998 99999999999984 56999999875
No 388
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=84.11 E-value=1.4 Score=42.68 Aligned_cols=54 Identities=17% Similarity=0.089 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEec
Q 010331 265 NREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTV 344 (513)
Q Consensus 265 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~ 344 (513)
+......+.++.|++|++++.|.++..++ +++.+.+. +|+++.+|.||+|+
T Consensus 111 ~~~l~~~l~~~~g~~i~~~~~V~~i~~~~-----------------------~~~~v~~~------~g~~~~ad~vV~A~ 161 (342)
T 3qj4_A 111 ISSIIKHYLKESGAEVYFRHRVTQINLRD-----------------------DKWEVSKQ------TGSPEQFDLIVLTM 161 (342)
T ss_dssp TTHHHHHHHHHHTCEEESSCCEEEEEECS-----------------------SSEEEEES------SSCCEEESEEEECS
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEEcC-----------------------CEEEEEEC------CCCEEEcCEEEECC
Confidence 33444445555599999999999998754 45666543 56668999999998
Q ss_pred CCC
Q 010331 345 GSK 347 (513)
Q Consensus 345 G~~ 347 (513)
+..
T Consensus 162 p~~ 164 (342)
T 3qj4_A 162 PVP 164 (342)
T ss_dssp CHH
T ss_pred CHH
Confidence 743
No 389
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=84.07 E-value=1.2 Score=41.98 Aligned_cols=33 Identities=33% Similarity=0.284 Sum_probs=29.3
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
++|+|.|+|+-|-..+..|.+. +++|++++++.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQ------GHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCc
Confidence 5899999999999999999984 55999999865
No 390
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=84.00 E-value=2.1 Score=44.24 Aligned_cols=60 Identities=13% Similarity=-0.002 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcc--eEEeeceEE
Q 010331 264 GNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLES--QIFEADLVL 341 (513)
Q Consensus 264 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g--~~i~aD~vi 341 (513)
.+.+.+.+.+++.||+++.+++|+++..+++.. .++.++.. +| .++.+|+||
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v--------------------~gv~~~~~------dG~~~~i~ad~VI 165 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERA--------------------VGVRYRNT------EGVELMAHARFIV 165 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEE--------------------EEEEEECS------SSCEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEE--------------------EEEEEEeC------CCCEEEEEcCEEE
Confidence 445566677788999999999999998754100 12334321 34 489999999
Q ss_pred EecCCCCC
Q 010331 342 WTVGSKPL 349 (513)
Q Consensus 342 ~a~G~~p~ 349 (513)
.|+|....
T Consensus 166 ~AdG~~S~ 173 (512)
T 3e1t_A 166 DASGNRTR 173 (512)
T ss_dssp ECCCTTCS
T ss_pred ECCCcchH
Confidence 99999754
No 391
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=83.95 E-value=0.89 Score=45.87 Aligned_cols=33 Identities=24% Similarity=0.371 Sum_probs=29.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|.|||.|+-|+..|..|++ ++ +|+++|+++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~------~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NH------EVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TS------EEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CC------eEEEEecCH
Confidence 4589999999999999999986 44 999999876
No 392
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=83.94 E-value=1.1 Score=44.19 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=29.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|+|+|+|..|..+|..|+.. +.+|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~------Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM------GAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 47899999999999999999884 45999999865
No 393
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=83.88 E-value=0.96 Score=43.39 Aligned_cols=36 Identities=28% Similarity=0.430 Sum_probs=28.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|.|||+|..|...|..|...+. .-+++|+|.++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~----~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGI----ADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC----CSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC----CCEEEEEcCCc
Confidence 3689999999999999999987421 12899999866
No 394
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=83.73 E-value=1.2 Score=41.81 Aligned_cols=34 Identities=26% Similarity=0.204 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++++|||+|-+|-++|..|.+.| .+|+|++|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G------~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG------LQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT------CEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC------CEEEEEeCCH
Confidence 679999999999999999999853 5999999865
No 395
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=83.66 E-value=1.1 Score=45.93 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCC-CC-eEEEEeCCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDK-KP-QVLLVDQSER 119 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~-~~-~V~lIe~~~~ 119 (513)
..+|.|||.|+-|+..|..|++ . ++ +|+++|.++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~------~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFAD------APCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH------STTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHH------hCCCCeEEEEECChh
Confidence 3589999999999999999998 5 78 9999999874
No 396
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=83.64 E-value=0.76 Score=43.78 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=29.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.+|.|||+|--|...|..|.+.+ .+|+++++++
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g------~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSL------PHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHC------TTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHCC------CeEEEEEecc
Confidence 358999999999999999999854 4999999874
No 397
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=83.64 E-value=2.1 Score=44.08 Aligned_cols=59 Identities=10% Similarity=0.041 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEe
Q 010331 264 GNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWT 343 (513)
Q Consensus 264 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a 343 (513)
.+.+.+.+.+++.|++|+.++++++++.++ +++.+++.+ ++..+++.+|+||.|
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~-----------------------~~v~v~~~~---~~g~~~~~a~~vVgA 160 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDG-----------------------AGVTVEVRG---PEGKHTLRAAYLVGC 160 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEET-----------------------TEEEEEEEE---TTEEEEEEESEEEEC
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcC-----------------------CeEEEEEEc---CCCCEEEEeCEEEEC
Confidence 445566677788899999999999998754 455565541 111247999999999
Q ss_pred cCCCC
Q 010331 344 VGSKP 348 (513)
Q Consensus 344 ~G~~p 348 (513)
.|...
T Consensus 161 DG~~S 165 (500)
T 2qa1_A 161 DGGRS 165 (500)
T ss_dssp CCTTC
T ss_pred CCcch
Confidence 99875
No 398
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=83.58 E-value=1.5 Score=43.63 Aligned_cols=58 Identities=12% Similarity=0.117 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcce--EEeeceEE
Q 010331 264 GNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQ--IFEADLVL 341 (513)
Q Consensus 264 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~--~i~aD~vi 341 (513)
.+.+.+.+.+++.|++++.++.|+++..++ +++.+.+.. .+|+ ++.+|+||
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~v~~----~~g~~~~~~a~~vV 159 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFG-----------------------TDSVTTIED----INGNKREIEARFII 159 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEET-----------------------TEEEEEEEE----TTSCEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-----------------------CEEEEEEEc----CCCCEEEEEcCEEE
Confidence 445566677777899999999999997654 222222221 1454 79999999
Q ss_pred EecCCCC
Q 010331 342 WTVGSKP 348 (513)
Q Consensus 342 ~a~G~~p 348 (513)
.|+|...
T Consensus 160 ~A~G~~s 166 (421)
T 3nix_A 160 DASGYGR 166 (421)
T ss_dssp ECCGGGC
T ss_pred ECCCCch
Confidence 9999774
No 399
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=83.50 E-value=1.1 Score=45.89 Aligned_cols=34 Identities=26% Similarity=0.401 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|.|||.|+-|+..|..|++. +++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~------G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI------GHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 36899999999999999999984 45999999865
No 400
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=83.36 E-value=1.3 Score=41.59 Aligned_cols=34 Identities=26% Similarity=0.269 Sum_probs=29.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++++|+|+|-+|.++|..|.+. +.+|++++++.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~------G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSL------DCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHc------CCEEEEEECCH
Confidence 46899999999999999999984 35999998764
No 401
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=83.35 E-value=1.4 Score=42.75 Aligned_cols=34 Identities=26% Similarity=0.325 Sum_probs=29.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~~ 118 (513)
..+|.|||+|..|.+.|..|+.. ++ +++|+|.++
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~------~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLK------ELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCc
Confidence 36899999999999999999884 33 999999866
No 402
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=83.21 E-value=1.4 Score=42.39 Aligned_cols=34 Identities=32% Similarity=0.477 Sum_probs=29.2
Q ss_pred eEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 81 ~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+|.|||+|..|...|..|++.+ .+.+|+++|.++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~----~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQ----LARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT----CCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCC----CCCEEEEEeCCh
Confidence 7999999999999999998731 256999999876
No 403
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=83.07 E-value=1.7 Score=46.13 Aligned_cols=48 Identities=23% Similarity=0.086 Sum_probs=40.5
Q ss_pred eCCCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCCC
Q 010331 373 TDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPL 429 (513)
Q Consensus 373 Vd~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~~ 429 (513)
.+.+|+++..||+|++|.++.. .-...|..||.+|+.|....+.++++
T Consensus 375 L~~tle~k~~~gLf~AGqinGt---------tGYeEAaaqGl~AG~nAa~~~~~~~~ 422 (651)
T 3ces_A 375 LKPTLESKFIQGLFFAGQINGT---------TGYEEAAAQGLLAGLNAARLSADKEG 422 (651)
T ss_dssp BCTTSBBSSSBTEEECSGGGTC---------CCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCccccccCCCCeEEEEEecCC---------cChHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3468899889999999999875 24558999999999999999988764
No 404
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=83.00 E-value=1.6 Score=43.26 Aligned_cols=36 Identities=25% Similarity=0.388 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
..++|+|||+|..|..++..++++ +++|+++|+.+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~------G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEM------GYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc------CCEEEEEeCCCC
Confidence 357999999999999999999985 459999998653
No 405
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=82.94 E-value=2 Score=41.72 Aligned_cols=35 Identities=23% Similarity=0.378 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+|||+|-.|..+|..|++.|. -+++|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGV-----g~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-----CEEEEecCCE
Confidence 4799999999999999999999764 2899999865
No 406
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=82.85 E-value=1.6 Score=45.87 Aligned_cols=59 Identities=8% Similarity=-0.000 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcc-eEEeeceEE
Q 010331 263 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLES-QIFEADLVL 341 (513)
Q Consensus 263 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g-~~i~aD~vi 341 (513)
..+.+.+.+.+++.|++|+.+++|++++.++ +++.+++.. .+| +++.+|+||
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~-----------------------~~v~v~~~~----~~G~~~~~a~~vV 200 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDA-----------------------EAVEVTVAG----PSGPYPVRARYGV 200 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCS-----------------------SCEEEEEEE----TTEEEEEEESEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-----------------------CeEEEEEEe----CCCcEEEEeCEEE
Confidence 3445566677777899999999999998755 455565521 156 789999999
Q ss_pred EecCCCC
Q 010331 342 WTVGSKP 348 (513)
Q Consensus 342 ~a~G~~p 348 (513)
.|.|...
T Consensus 201 ~ADG~~S 207 (570)
T 3fmw_A 201 GCDGGRS 207 (570)
T ss_dssp ECSCSSC
T ss_pred EcCCCCc
Confidence 9999864
No 407
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=82.84 E-value=1.3 Score=43.83 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=30.2
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..++|+|||+|..|..+|..++.. +.+|+++|+++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~------Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM------GATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 357999999999999999999884 45999999865
No 408
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=82.83 E-value=1.3 Score=42.24 Aligned_cols=35 Identities=37% Similarity=0.395 Sum_probs=30.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
++++|+|.|| |+-|...+..|.+. +++|+++++.+
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~ 41 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVAS------GEEVTVLDDLR 41 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT------TCCEEEECCCS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHC------CCEEEEEecCC
Confidence 3579999999 99999999999984 55999999866
No 409
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=82.80 E-value=1.1 Score=42.76 Aligned_cols=34 Identities=18% Similarity=0.025 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|.|||.|.-|...|..|.+. +++|+++|+++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA------GLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCeEEEEECCH
Confidence 46899999999999999999984 55999999865
No 410
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=82.61 E-value=2.4 Score=41.93 Aligned_cols=45 Identities=9% Similarity=0.089 Sum_probs=36.2
Q ss_pred CCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEecCCCCC
Q 010331 276 RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPL 349 (513)
Q Consensus 276 ~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~G~~p~ 349 (513)
.|++++++++++++..++ +++.+++. +|+++.+|+||.|.|....
T Consensus 110 ~~~~i~~~~~v~~i~~~~-----------------------~~v~v~~~------~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDS-----------------------ETVQMRFS------DGTKAEANWVIGADGGASV 154 (397)
T ss_dssp CSTTEETTCCEEEEEECS-----------------------SCEEEEET------TSCEEEESEEEECCCTTCH
T ss_pred CCcEEEcCCEEEEEEecC-----------------------CEEEEEEC------CCCEEECCEEEECCCcchh
Confidence 489999999999998754 45666654 5678999999999998753
No 411
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=82.59 E-value=1.9 Score=43.84 Aligned_cols=35 Identities=26% Similarity=0.355 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
.++|.|||+|.-|...|..|++ .+++|+++|+++.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~------aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGL------AGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH------CCCeEEEEECcHH
Confidence 4689999999999999999998 4569999999764
No 412
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=82.56 E-value=2 Score=44.89 Aligned_cols=59 Identities=17% Similarity=0.144 Sum_probs=42.6
Q ss_pred hhHHHHHHHHHHhC-CcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEE
Q 010331 263 PGNREAALKVLSAR-KVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVL 341 (513)
Q Consensus 263 ~~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi 341 (513)
..+.+.+.+.+++. ||+++.+ +|+++..+++. ..+.+.+. +|+++.+|+||
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g---------------------~~~~v~~~------~G~~i~ad~vI 245 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANG---------------------NIESVRTA------TGRVFDADLFV 245 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTS---------------------CEEEEEET------TSCEEECSEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCC---------------------CEEEEEEC------CCCEEECCEEE
Confidence 34566677778888 9999999 89998764310 11334432 56789999999
Q ss_pred EecCCCCC
Q 010331 342 WTVGSKPL 349 (513)
Q Consensus 342 ~a~G~~p~ 349 (513)
.|+|....
T Consensus 246 ~A~G~~S~ 253 (550)
T 2e4g_A 246 DCSGFRGL 253 (550)
T ss_dssp ECCGGGCC
T ss_pred ECCCCchh
Confidence 99998765
No 413
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=82.55 E-value=1.6 Score=39.04 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=28.2
Q ss_pred eEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 81 RICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 81 ~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+|+|.|| |+-|...+..|.+. +++|+++++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR------GHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhC------CCEEEEEEcCc
Confidence 6999996 99999999999984 56999999875
No 414
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=82.51 E-value=1.3 Score=39.93 Aligned_cols=34 Identities=21% Similarity=0.229 Sum_probs=29.5
Q ss_pred CCeEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+++|+|.|| |+-|...+..|.+ .+++|+++++++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~------~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALN------RGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHT------TTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHH------CCCEEEEEEcCc
Confidence 368999996 9999999999998 456999999875
No 415
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=82.48 E-value=1.3 Score=39.90 Aligned_cols=34 Identities=26% Similarity=0.265 Sum_probs=28.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|.|||+|.-|...|..|.+. +++|+++++++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~------g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGS------GFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 35899999999999999999884 45899999864
No 416
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=82.47 E-value=1.6 Score=40.30 Aligned_cols=36 Identities=25% Similarity=0.242 Sum_probs=30.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
...++|.|||.|.-|...|..|.+. +++|+++++++
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~------G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADL------GHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCh
Confidence 3457999999999999999999984 55999999875
No 417
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=82.44 E-value=1.6 Score=42.04 Aligned_cols=33 Identities=36% Similarity=0.654 Sum_probs=29.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQS 117 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~ 117 (513)
..+|.|||+|..|.+.|..|+. .++ +|+|+|.+
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~------~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQ------KELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCCeEEEEecc
Confidence 4689999999999999999988 345 99999986
No 418
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=82.40 E-value=1.4 Score=42.56 Aligned_cols=37 Identities=24% Similarity=0.452 Sum_probs=29.9
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+..+|+|||+|..|.+.|..|...+. .-+|+++|.++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~----~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGI----ADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTC----CSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCC----CCEEEEEeCCc
Confidence 34699999999999999999987432 23899999864
No 419
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=82.08 E-value=1.5 Score=46.58 Aligned_cols=46 Identities=22% Similarity=0.176 Sum_probs=39.0
Q ss_pred CCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCCC
Q 010331 375 ETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPL 429 (513)
Q Consensus 375 ~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~~~~ 429 (513)
++|+++..||+|++|+++... -...|..||.+++.|+...+.++++
T Consensus 371 ~tle~k~~~gLf~AGqi~g~~---------Gy~eA~a~G~~AG~naa~~~~~~~~ 416 (641)
T 3cp8_A 371 STMETRPVENLFFAGQINGTS---------GYEEAAAQGLMAGINAVRKILGKEL 416 (641)
T ss_dssp TTSBBSSSBTEEECSGGGTBC---------CHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CcccccCcCCEEEEEeecCCc---------cHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 588988899999999999862 3448899999999999999888764
No 420
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=82.00 E-value=1.6 Score=38.45 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=29.2
Q ss_pred CeEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 80 PRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 80 ~~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
++|+|.|| |+-|..++..|.+. +++|+++++++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~------g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA------GYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC------CCeEEEEEeCh
Confidence 58999998 99999999999984 56999999865
No 421
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=81.89 E-value=1.6 Score=41.66 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=29.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~~ 118 (513)
.++|+|||+|-+|..+|..|.+. +. +|+|++++.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~------G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLST------AAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT------TCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHC------CCCEEEEEeCCH
Confidence 47899999999999999999984 44 899998864
No 422
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=81.88 E-value=1.4 Score=42.66 Aligned_cols=36 Identities=19% Similarity=0.386 Sum_probs=29.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|.|||+|..|.++|..|+..+. --+++|+|.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~----~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGI----TDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC----CSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC----CceEEEEecch
Confidence 4689999999999999999988532 12899999854
No 423
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=81.79 E-value=1.7 Score=42.03 Aligned_cols=35 Identities=23% Similarity=0.201 Sum_probs=29.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|.|||+|..|.+.|..|+..+. . +++|+|.++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~----~-~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQL----G-DVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----C-EEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC----c-eEEEEeCCh
Confidence 3689999999999999999988432 2 999999876
No 424
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=81.74 E-value=1.5 Score=42.76 Aligned_cols=33 Identities=30% Similarity=0.241 Sum_probs=29.0
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.+|.|||+|.-|...|..|.+. +++|+++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~------g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK------GQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 5899999999999999999984 45999999865
No 425
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=81.66 E-value=1.5 Score=42.48 Aligned_cols=35 Identities=26% Similarity=0.313 Sum_probs=30.0
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.++|.|||+|.-|...|..|.+ .+++|+++++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~------~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHE------NGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHh------CCCeEEEEeCCH
Confidence 45799999999999999999998 455999999864
No 426
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=81.63 E-value=2.7 Score=43.26 Aligned_cols=59 Identities=15% Similarity=-0.008 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEE
Q 010331 263 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLW 342 (513)
Q Consensus 263 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~ 342 (513)
..+.+.+.+.+++.||+++.+ +|+++..+++. ..+.+++. +|+++.+|+||.
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~---------------------~~~~v~~~------~g~~~~ad~vV~ 224 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERG---------------------WISGVHTK------QHGEISGDLFVD 224 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTS---------------------CEEEEEES------SSCEEECSEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCC---------------------CEEEEEEC------CCCEEEcCEEEE
Confidence 345566667777899999999 89988764310 11334432 566899999999
Q ss_pred ecCCCCC
Q 010331 343 TVGSKPL 349 (513)
Q Consensus 343 a~G~~p~ 349 (513)
|+|....
T Consensus 225 A~G~~S~ 231 (511)
T 2weu_A 225 CTGFRGL 231 (511)
T ss_dssp CCGGGCC
T ss_pred CCCcchH
Confidence 9999764
No 427
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=81.55 E-value=1.2 Score=42.44 Aligned_cols=34 Identities=21% Similarity=0.161 Sum_probs=30.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.+|.|||.|.-|...|..|.+. +++|+++|+++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~------G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW------PGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS------TTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCH
Confidence 46899999999999999999984 55999999876
No 428
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=81.51 E-value=2.2 Score=42.36 Aligned_cols=54 Identities=15% Similarity=0.108 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEEec
Q 010331 265 NREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTV 344 (513)
Q Consensus 265 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~a~ 344 (513)
+.+.+.+.+.+ ++|+++++|++++.++ +++.+++. +|+++.+|+||.|.
T Consensus 129 l~~~L~~~~~~--~~i~~~~~v~~i~~~~-----------------------~~v~v~~~------~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 129 LQREMLDYWGR--DSVQFGKRVTRCEEDA-----------------------DGVTVWFT------DGSSASGDLLIAAD 177 (407)
T ss_dssp HHHHHHHHHCG--GGEEESCCEEEEEEET-----------------------TEEEEEET------TSCEEEESEEEECC
T ss_pred HHHHHHHhCCc--CEEEECCEEEEEEecC-----------------------CcEEEEEc------CCCEEeeCEEEECC
Confidence 33444455554 8899999999998755 55666654 67799999999999
Q ss_pred CCCCC
Q 010331 345 GSKPL 349 (513)
Q Consensus 345 G~~p~ 349 (513)
|....
T Consensus 178 G~~S~ 182 (407)
T 3rp8_A 178 GSHSA 182 (407)
T ss_dssp CTTCS
T ss_pred CcChH
Confidence 98754
No 429
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=81.43 E-value=1.3 Score=40.41 Aligned_cols=36 Identities=19% Similarity=0.160 Sum_probs=29.7
Q ss_pred CCCeEEEEC-CCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILG-GGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVG-gG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
++++|+|.| +|.-|..++..|.+.+ .++|+++++++
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G-----~~~V~~~~R~~ 58 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQ-----TIKQTLFARQP 58 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCT-----TEEEEEEESSG
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCC-----CceEEEEEcCh
Confidence 457899999 4999999999999843 16999999865
No 430
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=81.39 E-value=1.7 Score=42.72 Aligned_cols=35 Identities=20% Similarity=0.049 Sum_probs=29.7
Q ss_pred CCCeEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
|+++|+|.|| |+-|...+..|.+. +++|++++++.
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~------g~~V~~~~r~~ 62 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGK------GYEVHGLIRRS 62 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCC
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHC------CCEEEEEecCC
Confidence 3478999998 99999999999984 56999999865
No 431
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=81.33 E-value=2.9 Score=42.32 Aligned_cols=62 Identities=13% Similarity=-0.145 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceE-EEecccccCCcceEEeeceEEE
Q 010331 264 GNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI-LELQPAIKGLESQIFEADLVLW 342 (513)
Q Consensus 264 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~~~~~~~~g~~i~aD~vi~ 342 (513)
.+.+.+.+.+.+.|++++.++.|+++..++ +.+. +.+.... .++..++.+|+||.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-----------------------~~v~gv~~~~~~-~G~~~~~~ad~VV~ 156 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFED-----------------------GYVKGAVLFNRR-TNEELTVYSKVVVE 156 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET-----------------------TEEEEEEEEETT-TTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEEC-----------------------CEEEEEEEEEcC-CCceEEEEcCEEEE
Confidence 344556677777899999999999987644 3322 3332100 11223899999999
Q ss_pred ecCCCCC
Q 010331 343 TVGSKPL 349 (513)
Q Consensus 343 a~G~~p~ 349 (513)
|+|....
T Consensus 157 AdG~~s~ 163 (453)
T 3atr_A 157 ATGYSRS 163 (453)
T ss_dssp CCGGGCT
T ss_pred CcCCchh
Confidence 9998754
No 432
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=81.29 E-value=1.5 Score=41.95 Aligned_cols=33 Identities=36% Similarity=0.518 Sum_probs=28.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.+|.|||+|--|...|..|. .+. +|+++++++
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~------~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYH------DVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTS------EEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCC------ceEEEECCH
Confidence 468999999999999999998 544 999999865
No 433
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=81.26 E-value=1.6 Score=43.45 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=30.1
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
++|+|||||+||+.||..|++. +.+|+|||+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~------G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL------GVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHC------CCcEEEEeccC
Confidence 6899999999999999999994 55999999876
No 434
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=81.16 E-value=1.4 Score=41.92 Aligned_cols=34 Identities=15% Similarity=0.186 Sum_probs=28.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.+|.|||.|.-|...|..|.+. +++|+++|+++
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~~ 38 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKA------GYSLVVSDRNP 38 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSCH
T ss_pred cceEEEECchHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 35899999999999999999884 45999998865
No 435
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=81.12 E-value=1.6 Score=41.27 Aligned_cols=33 Identities=21% Similarity=0.190 Sum_probs=29.4
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
++|.|||.|.-|...|..|.+. +++|+++|+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA------GCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCeEEEEcCCH
Confidence 5899999999999999999984 45999999876
No 436
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=81.06 E-value=2.1 Score=42.01 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+|||+|-.|..+|..|++.|. -+++|+|...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGv-----g~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGI-----GEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-----CeEEEECCCc
Confidence 5789999999999999999999764 2899999865
No 437
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=81.03 E-value=2.3 Score=40.87 Aligned_cols=34 Identities=26% Similarity=0.304 Sum_probs=29.3
Q ss_pred CCeEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|+|.|| |+-|...+..|.+. +++|++++++.
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~------g~~V~~~~r~~ 54 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQ------GHEILVIDNFA 54 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGG------TCEEEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCC
Confidence 468999998 99999999999984 45999999854
No 438
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=80.95 E-value=1.5 Score=42.51 Aligned_cols=32 Identities=31% Similarity=0.533 Sum_probs=28.3
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQS 117 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~ 117 (513)
.+|.|||+|.-|...|..|.+. +.+|++++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~------g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA------GEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT------TCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCEEEEEECh
Confidence 5899999999999999999984 4599999873
No 439
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=80.90 E-value=1.4 Score=42.03 Aligned_cols=35 Identities=26% Similarity=0.415 Sum_probs=30.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+++|.|||.|.-|-..|..|+ .|+ +|+++|+++
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~------~V~v~d~~~ 44 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKH------EVVLQDVSE 44 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTS------EEEEECSCH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCC------EEEEEECCH
Confidence 34689999999999999999998 765 999999876
No 440
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=80.88 E-value=1.9 Score=38.54 Aligned_cols=32 Identities=31% Similarity=0.435 Sum_probs=28.1
Q ss_pred eEEEEC-CCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 81 RICILG-GGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 81 ~VVIVG-gG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+|.||| +|..|...|..|.+ .+++|+++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~------~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT------LGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT------TTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 699999 99999999999987 445999999864
No 441
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=80.83 E-value=1.6 Score=42.31 Aligned_cols=37 Identities=16% Similarity=0.179 Sum_probs=29.9
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
...+|.|||+|..|.++|..|...+. --+++|+|.++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~----~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGI----AQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTC----CSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC----CCeEEEEeCCh
Confidence 35699999999999999999988532 12899999854
No 442
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=80.79 E-value=1.3 Score=41.68 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=29.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|+|+|+|-+|.++|..|.+. +.+|++++++.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~------G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQA------QQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHT------TCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCH
Confidence 47899999999999999999984 35999999865
No 443
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=80.76 E-value=1.9 Score=43.42 Aligned_cols=30 Identities=13% Similarity=0.092 Sum_probs=25.1
Q ss_pred ChhHHHHHHHHHHhCCcEEEcCceeeEEec
Q 010331 262 TPGNREAALKVLSARKVQLVLGYFVRCIRR 291 (513)
Q Consensus 262 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~ 291 (513)
+..+.+.+.+.+++.|++++.+++|+++..
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~ 209 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVEL 209 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEe
Confidence 346667777888899999999999999976
No 444
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=80.74 E-value=1.6 Score=44.31 Aligned_cols=34 Identities=26% Similarity=0.518 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..++.|||.|+-|+..|..|++. +++|+++|+++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~------G~~V~~~D~~~ 41 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF------GHEVVCVDKDA 41 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 36899999999999999999994 55999999877
No 445
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=80.71 E-value=1.6 Score=42.09 Aligned_cols=36 Identities=17% Similarity=0.309 Sum_probs=29.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.+|+|||+|..|.++|..|...+. -.++.|+|.++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~----~~ei~L~Di~~ 41 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSI----VDELVIIDLDT 41 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCS----CSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC----CCEEEEEeCCh
Confidence 3699999999999999999987432 23899999753
No 446
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=80.62 E-value=2.6 Score=41.57 Aligned_cols=36 Identities=31% Similarity=0.362 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
..++|.|||+|.-|..++..++++| ++|+++|+.+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG------~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMG------YKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT------CEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC------CEEEEEECCCC
Confidence 3579999999999999999999954 59999998663
No 447
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=80.61 E-value=1.5 Score=41.76 Aligned_cols=34 Identities=21% Similarity=0.148 Sum_probs=29.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.+|.|||.|.-|...|..|.+. +++|+++|+++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~------G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKA------GYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT------TCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhC------CCeEEEEcCCH
Confidence 46899999999999999999984 55999999865
No 448
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=80.57 E-value=1.2 Score=43.58 Aligned_cols=37 Identities=16% Similarity=0.125 Sum_probs=32.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCcc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~ 121 (513)
.++++|+|+|+-+.+.|..+..+++ +|+++|.++.+.
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf------~V~v~D~R~~~~ 235 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGF------YTVVTDWRPNQC 235 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTE------EEEEEESCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC------eEEEECCCcccc
Confidence 5799999999999999999998765 999999988543
No 449
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=80.51 E-value=1.5 Score=42.19 Aligned_cols=35 Identities=17% Similarity=0.047 Sum_probs=30.3
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCC-CeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~-~~V~lIe~~~ 118 (513)
+..+|.|||.|.-|...|..|.+. + ++|+++|+++
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~------G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGR------NAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT------TCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHc------CCCeEEEEeCCC
Confidence 346899999999999999999984 4 5999999865
No 450
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=80.44 E-value=1.4 Score=43.18 Aligned_cols=34 Identities=38% Similarity=0.352 Sum_probs=29.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|.|||+|.-|.+.|..|++ .+++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~------~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR------KGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT------TTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHH------CCCeEEEEeCCH
Confidence 3589999999999999999998 455999999865
No 451
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=80.41 E-value=1.8 Score=43.67 Aligned_cols=38 Identities=16% Similarity=0.153 Sum_probs=32.9
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCCccc
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~~~~ 122 (513)
.++|+|||+|++|+++|..|++. +.+|+|+|++++...
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~------g~~v~~~e~~~~~gg 43 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVN------GKKVLHMDRNPYYGG 43 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCcEEEEecCCCccc
Confidence 47999999999999999999984 559999999875543
No 452
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=80.27 E-value=1.4 Score=42.50 Aligned_cols=34 Identities=26% Similarity=0.268 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|.|||.|.-|...|..|.+. +++|+++|+++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEA------GYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhC------CCeEEEEcCCH
Confidence 46899999999999999999984 55999999865
No 453
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=80.21 E-value=2.4 Score=40.31 Aligned_cols=35 Identities=23% Similarity=0.225 Sum_probs=30.0
Q ss_pred CCCeEEEEC-CCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILG-GGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVG-gG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.++|.||| .|.-|.+.|..|.+. +++|+++++++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~------G~~V~~~~~~~ 55 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRAS------GYPISILDRED 55 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTT------TCCEEEECTTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhC------CCeEEEEECCc
Confidence 346899999 999999999999884 55999999865
No 454
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=80.18 E-value=2.2 Score=43.52 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=30.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|.|||+|.-|...|..|++ .+++|+++|+++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~------~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR------VGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT------TTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHh------CCCeEEEEECCH
Confidence 4689999999999999999998 456999999876
No 455
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=80.14 E-value=2 Score=43.40 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=25.5
Q ss_pred CCCeEEEECCCHHHH-HHHHHhhhccccCCCCCeEE-EEeCCC
Q 010331 78 KKPRICILGGGFGGL-YTALRLESLVWQDDKKPQVL-LVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl-~aA~~L~~~~~~~~~~~~V~-lIe~~~ 118 (513)
.+.+|.|||.|.-|. ..+..|.+. ++++++ ++|+++
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~~-----~~~~lvav~d~~~ 119 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAGC-----QHSRIEALVSGNA 119 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTTC-----SSEEEEEEECSCH
T ss_pred CceEEEEECCcHHHHHHHHHHHhhC-----CCcEEEEEEcCCH
Confidence 346999999999996 677777652 456754 666643
No 456
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=80.12 E-value=1.5 Score=43.73 Aligned_cols=57 Identities=11% Similarity=0.059 Sum_probs=38.3
Q ss_pred ChhHHHHHHHHHHhCCcEEEcCceee---------EEeccccccccccCCCcccccccccccCCCceEEEecccccCCcc
Q 010331 262 TPGNREAALKVLSARKVQLVLGYFVR---------CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLES 332 (513)
Q Consensus 262 ~~~~~~~~~~~l~~~gV~v~~~~~v~---------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g 332 (513)
+..+...+.+.+++.|++++.+++|. ++..++ +.+.+++. ++
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~-----------------------~~v~v~~~------~g 221 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN-----------------------THQIVVHE------TR 221 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC------------------------------CBC------CE
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC-----------------------CeEEEEEC------Cc
Confidence 34566667778888999999999988 665433 23333321 34
Q ss_pred eEEeeceEEEecCCCC
Q 010331 333 QIFEADLVLWTVGSKP 348 (513)
Q Consensus 333 ~~i~aD~vi~a~G~~p 348 (513)
++.||.||.|+|...
T Consensus 222 -~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 222 -QIRAGVIIVAAGAAG 236 (405)
T ss_dssp -EEEEEEEEECCGGGH
T ss_pred -EEECCEEEECCCccH
Confidence 799999999999764
No 457
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=79.99 E-value=2.1 Score=38.35 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=28.2
Q ss_pred eEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 81 RICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 81 ~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+|+|.|| |+-|...+..|.+. +++|+++++++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRR------GHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHC------CCEEEEEEecc
Confidence 6999998 99999999999984 56999999864
No 458
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=79.97 E-value=1.7 Score=41.60 Aligned_cols=35 Identities=26% Similarity=0.242 Sum_probs=29.2
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.+|.|||+|.-|...|..|.+.+. ..+|+++|+++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~----~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGV----ADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC----CSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC----CCEEEEEcCCH
Confidence 489999999999999999988541 14999999864
No 459
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=79.94 E-value=2 Score=43.79 Aligned_cols=34 Identities=38% Similarity=0.443 Sum_probs=29.5
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..++|+|+|||-.|..+|..|.+ +++|.+||++.
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~~-------~~~v~iIE~d~ 267 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLEQ-------TYSVKLIERNL 267 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTT-------TSEEEEEESCH
T ss_pred cccEEEEEcchHHHHHHHHHhhh-------cCceEEEecCH
Confidence 34799999999999999999964 46999999876
No 460
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=79.87 E-value=1.8 Score=41.19 Aligned_cols=34 Identities=12% Similarity=0.158 Sum_probs=27.4
Q ss_pred CCeEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|+|.|| |+-|...+..|.+ .+++|++++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~------~g~~V~~~~r~~ 36 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ------NNWHAVGCGFRR 36 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT------TTCEEEEEC---
T ss_pred CCeEEEECCCcHHHHHHHHHHHh------CCCeEEEEccCC
Confidence 468999998 9999999999998 456999998754
No 461
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=79.76 E-value=1.7 Score=40.28 Aligned_cols=35 Identities=26% Similarity=0.283 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+|||.|-.|..+|..|++.|. -+++|+|...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gv-----g~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGV-----GTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTC-----SEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCC-----CeEEEEeCCC
Confidence 4689999999999999999999654 2899999865
No 462
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=79.75 E-value=2.1 Score=40.75 Aligned_cols=34 Identities=24% Similarity=0.438 Sum_probs=29.3
Q ss_pred CCeEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+++|+|.|| |+-|-..+..|.+. +++|+++++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~ 36 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKND------GNTPIILTRSI 36 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC------CCEEEEEeCCC
Confidence 468999995 99999999999984 55999999863
No 463
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=79.73 E-value=1.9 Score=44.99 Aligned_cols=34 Identities=32% Similarity=0.491 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~~ 119 (513)
..||||||||+||++||..|++ +. +|+|||+.+.
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~------~V~vlEk~~~ 41 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QH------QVIVLSKGPV 41 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TS------CEEEECSSCT
T ss_pred CCCEEEECccHHHHHHHHHHhc-CC------cEEEEECCCC
Confidence 4799999999999999999987 54 9999999763
No 464
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=79.73 E-value=2.4 Score=39.99 Aligned_cols=34 Identities=15% Similarity=0.260 Sum_probs=29.5
Q ss_pred CCeEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.+|.|||+ |.-|...|..|.+. +++|+++|+++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~------g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS------AHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS------SSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 468999999 99999999999884 45999999764
No 465
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=79.61 E-value=2 Score=40.96 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=30.2
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..++|.|||.|..|..+|..|... +.+|+++|++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL------GANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC------CCEEEEEECCH
Confidence 357999999999999999999874 45999999864
No 466
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=79.51 E-value=1.7 Score=44.32 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++|+|+|+|..|..+|..|+.. +.+|+++|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~------GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQA------GARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCH
Confidence 57999999999999999999984 55999999865
No 467
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=79.47 E-value=2.3 Score=40.97 Aligned_cols=35 Identities=9% Similarity=0.192 Sum_probs=29.9
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~~ 118 (513)
..++++|+|+|-+|-++|..|++ .+. +|+|+++++
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~------~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAAL------DGVKEISIFNRKD 188 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH------TTCSEEEEEECSS
T ss_pred cCCEEEEECCChHHHHHHHHHHH------CCCCEEEEEECCC
Confidence 35799999999999999999998 455 899999874
No 468
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=79.39 E-value=1.6 Score=44.20 Aligned_cols=32 Identities=38% Similarity=0.401 Sum_probs=28.6
Q ss_pred eEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 81 ~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+|.|||.|+-|+..|..|++. +++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~------G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR------GHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT------TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC------CCEEEEEECCH
Confidence 799999999999999999984 45999999865
No 469
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=79.36 E-value=2.1 Score=40.65 Aligned_cols=35 Identities=20% Similarity=0.313 Sum_probs=30.1
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..++|.|||.|..|..+|..|... +.+|+++|+..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL------GAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 357999999999999999999874 45999999864
No 470
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=79.32 E-value=2.1 Score=42.13 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=27.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+.||+|+|+|..|-.+|..|.+ ..+|++.|.+.
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~~-------~~~v~~~~~~~ 48 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLKD-------EFDVYIGDVNN 48 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTT-------TSEEEEEESCH
T ss_pred CCccEEEEECCCHHHHHHHHHHhc-------CCCeEEEEcCH
Confidence 345689999999999999999975 35899988754
No 471
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=79.31 E-value=2.2 Score=40.33 Aligned_cols=35 Identities=20% Similarity=0.169 Sum_probs=29.6
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~~ 118 (513)
..++++|+|+|-+|-+++..|.+. +. +|+|++++.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~------G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTH------GVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC------CCCEEEEEECCH
Confidence 357999999999999999999984 44 799998864
No 472
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=79.26 E-value=1.7 Score=42.45 Aligned_cols=90 Identities=13% Similarity=0.029 Sum_probs=47.8
Q ss_pred cceEEeeceEEEecCCCCCC-CCCCCCCCccCCCccCCCCC----------eEeCCCccccCCCCEEEEcccccccCCCC
Q 010331 331 ESQIFEADLVLWTVGSKPLL-PHVEPPNNRLHDLPLNARGQ----------AETDETLCVKGHPRIFALGDSSALRDSSG 399 (513)
Q Consensus 331 ~g~~i~aD~vi~a~G~~p~~-~~l~~~~~~~~~~~~~~~G~----------i~Vd~~l~~~~~p~VfaiGD~a~~~~~~g 399 (513)
+..+|.+++||.|+|..... .++..- +...++...-.|. ..|+.+-++ +|++|++|=.++-.+ |
T Consensus 234 d~~~i~Ak~VV~ATG~~s~v~~~~~~~-l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v--~~gl~~~gm~~~~~~--g 308 (344)
T 3jsk_A 234 DPNTINAPVIISTTGHDGPFGAFSVKR-LVSMKQMERLNGMRGLDMQSAEDAIVNNTREI--VPGLIVGGMELSEID--G 308 (344)
T ss_dssp BCEEEECSEEEECCCSSSSSSCHHHHH-HHHTTSSSCCCCCEEECHHHHHHHHHHTCEEE--ETTEEECGGGHHHHH--T
T ss_pred CceEEEcCEEEECCCCCchhhHHHHHH-HhhcCcccccCCCcccccccchhhhcccCceE--cCCEEEechhhHhhc--C
Confidence 45689999999999987641 110000 0000111000111 122223333 799999998876432 2
Q ss_pred CCCC-CchHHHHHHHHHHHHHHHHHHC
Q 010331 400 RPLP-ATAQVAFQQADFAGWNLWAAIN 425 (513)
Q Consensus 400 ~~~~-~~a~~A~~qg~~~a~ni~~~l~ 425 (513)
.|.. ++--.=...|+.+|+-|...++
T Consensus 309 ~~rmgp~fg~m~~sg~~~a~~~~~~~~ 335 (344)
T 3jsk_A 309 ANRMGPTFGAMALSGVKAAHEAIRVFD 335 (344)
T ss_dssp CEECCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccceeeecCHHHHHHHHHHHH
Confidence 2222 2322334678999988887764
No 473
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=79.19 E-value=2.2 Score=40.31 Aligned_cols=32 Identities=31% Similarity=0.421 Sum_probs=28.3
Q ss_pred eEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 81 RICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 81 ~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
||+|.|| |+-|-..+.+|.+. +++|+++.+++
T Consensus 2 kILVTGatGfIG~~L~~~L~~~------G~~V~~l~R~~ 34 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNAR------GHEVTLVSRKP 34 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSC
T ss_pred EEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCC
Confidence 7999998 99999999999984 55999998865
No 474
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=78.98 E-value=2 Score=41.05 Aligned_cols=35 Identities=20% Similarity=0.154 Sum_probs=30.3
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+..+|.|||.|.-|...|..|.+. +++|+++|+++
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~------G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ------GKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 346899999999999999999984 55999999865
No 475
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=78.97 E-value=2.5 Score=40.91 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=29.5
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
...+|.|||+|..|.++|..|...+. --+++|+|.+.
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~----~~el~L~Di~~ 54 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDL----ADELALVDVIE 54 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTC----CSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC----CceEEEEeCCh
Confidence 35799999999999999999987421 22899999753
No 476
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=78.95 E-value=2 Score=41.53 Aligned_cols=38 Identities=18% Similarity=0.203 Sum_probs=29.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 77 ~~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++.+|+|||+|..|.+.|..|...+. --++.|+|.+.
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~----~~el~L~Di~~ 44 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGI----AQEIGIVDIFK 44 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTC----CSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCC----CCEEEEEeCCc
Confidence 334799999999999999999987432 23899999743
No 477
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=78.94 E-value=1.9 Score=41.10 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=29.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
|+++|+|+|| |+-|...+..|.+. +++|+++.+++
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~ 45 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKL------GHPTYVFTRPN 45 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECTT
T ss_pred CCCeEEEECCCchHHHHHHHHHHHC------CCcEEEEECCC
Confidence 4568999997 99999999999984 45999998865
No 478
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=78.81 E-value=2.3 Score=38.81 Aligned_cols=33 Identities=21% Similarity=0.137 Sum_probs=28.7
Q ss_pred CeEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 80 PRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 80 ~~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
++|+|.|| |+-|..++..|.+. +++|+++++++
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~------g~~V~~~~r~~ 35 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARA------GHTVIGIDRGQ 35 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhC------CCEEEEEeCCh
Confidence 57999998 99999999999984 55999999865
No 479
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=78.60 E-value=4.7 Score=42.27 Aligned_cols=62 Identities=13% Similarity=-0.011 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeEEeccc-cccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEE
Q 010331 264 GNREAALKVLSARKVQLVLGYFVRCIRRVG-EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLW 342 (513)
Q Consensus 264 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~ 342 (513)
.+.+.+.+.+++.||+|++++.+.++..++ ... .++.+... .+...++.+|.||+
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v--------------------~GV~~~~~----~G~~~~i~A~~VVl 311 (572)
T 1d4d_A 256 HVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKV--------------------TGVLVKGE----YTGYYVIKADAVVI 311 (572)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCE--------------------EEEEEEET----TTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeE--------------------EEEEEEeC----CCcEEEEEcCEEEE
Confidence 445666777888999999999999996533 100 12333311 11224799999999
Q ss_pred ecCCCCC
Q 010331 343 TVGSKPL 349 (513)
Q Consensus 343 a~G~~p~ 349 (513)
|+|..++
T Consensus 312 AtGg~~~ 318 (572)
T 1d4d_A 312 AAGGFAK 318 (572)
T ss_dssp CCCCCTT
T ss_pred eCCCCcc
Confidence 9997664
No 480
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=78.60 E-value=1.4 Score=41.60 Aligned_cols=33 Identities=21% Similarity=0.087 Sum_probs=29.3
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
++|.|||.|.-|...|..|.+.| ++|+++|+++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G------~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG------FDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT------CCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCC------CeEEEEcCCH
Confidence 47999999999999999999854 4999999876
No 481
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=78.56 E-value=1.9 Score=43.11 Aligned_cols=31 Identities=29% Similarity=0.423 Sum_probs=27.9
Q ss_pred eEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 81 ~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+|.|||.|+-|+..|..|++ ++ +|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~------~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QN------EVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TS------EEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CC------EEEEEECCH
Confidence 79999999999999999987 54 999999865
No 482
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=78.52 E-value=1.7 Score=42.64 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=24.7
Q ss_pred CCCeEEEECCCHHH-----HHHHHHhhhccccCCCCCeEEEEeC
Q 010331 78 KKPRICILGGGFGG-----LYTALRLESLVWQDDKKPQVLLVDQ 116 (513)
Q Consensus 78 ~~~~VVIVGgG~AG-----l~aA~~L~~~~~~~~~~~~V~lIe~ 116 (513)
|+++|+|.|||.+| ++.|..|.+ .+++|+.+-.
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~------~g~~V~~vg~ 38 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQA------RGYAVHWLGT 38 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHH------TTCEEEEEEC
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHh------CCCEEEEEEC
Confidence 46899999999987 567788877 4569988743
No 483
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=78.45 E-value=2.1 Score=40.71 Aligned_cols=35 Identities=29% Similarity=0.210 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+|||.|-.|-.+|..|++.|. -+++|+|...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGV-----G~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGI-----GKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCC-----CEEEEECCCc
Confidence 4699999999999999999999764 2899999765
No 484
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=78.44 E-value=2.5 Score=39.98 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=29.4
Q ss_pred CCeEEEEC-CCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILG-GGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVG-gG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.++++|+| +|.+|.++|..|.+. +.+|++++++.
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~------G~~V~i~~R~~ 153 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGE------GAEVVLCGRKL 153 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT------TCEEEEEESSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC------cCEEEEEECCH
Confidence 47899999 899999999999984 55899998864
No 485
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=78.42 E-value=2.3 Score=40.97 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=28.1
Q ss_pred CCCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
...+|.|||+|.-|...|..|++ .+.+|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~------~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLAR------AGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHH------TTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHH------CCCeEEEE-EcH
Confidence 35789999999999999999998 45599999 654
No 486
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=78.35 E-value=1.2 Score=40.38 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=28.8
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEE-EeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLL-VDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~l-Ie~~~ 118 (513)
+.+|.|||+|.-|...|..|.+. +++|++ +++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~------g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAA------QIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHT------TCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCCH
Confidence 35899999999999999999984 458988 77765
No 487
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=78.31 E-value=4.2 Score=42.84 Aligned_cols=61 Identities=21% Similarity=0.168 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeEEeccccccccccCCCcccccccccccCCCceEEEecccccCCcceEEeeceEEE
Q 010331 263 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLW 342 (513)
Q Consensus 263 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~i~aD~vi~ 342 (513)
..+.+.+.+.+++.||+++.+++|+++..++. +.+.+.+.. +++..++.||+||.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g----------------------~~~~V~~~~---~G~~~~i~AdlVV~ 182 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLSDP----------------------DRVVLTVRR---GGESVTVESDFVID 182 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECCST----------------------TCEEEEEEE---TTEEEEEEESEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC----------------------CEEEEEEec---CCceEEEEcCEEEE
Confidence 34455666777889999999999999976421 334444421 11226899999999
Q ss_pred ecCCCC
Q 010331 343 TVGSKP 348 (513)
Q Consensus 343 a~G~~p 348 (513)
|+|...
T Consensus 183 AdG~~S 188 (591)
T 3i3l_A 183 AGGSGG 188 (591)
T ss_dssp CCGGGC
T ss_pred CCCCcc
Confidence 999875
No 488
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=78.27 E-value=2.2 Score=42.00 Aligned_cols=33 Identities=27% Similarity=0.445 Sum_probs=29.0
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
++|+|||+|..|...+..|.++ ++++++++..+
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~------G~~v~~~~~~~ 34 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKM------GFYVIVLDPTP 34 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCC
Confidence 6899999999999999999885 45999999865
No 489
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=78.20 E-value=1.8 Score=41.77 Aligned_cols=32 Identities=31% Similarity=0.331 Sum_probs=28.1
Q ss_pred eEEEECCCHHHHHHHHHhhhccccCCCCC--eEEEEeCCC
Q 010331 81 RICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSE 118 (513)
Q Consensus 81 ~VVIVGgG~AGl~aA~~L~~~~~~~~~~~--~V~lIe~~~ 118 (513)
+|.|||+|.-|.+.|..|.+. ++ +|+++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~------g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK------GFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCCh
Confidence 799999999999999999884 44 899999864
No 490
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=78.14 E-value=2.3 Score=45.47 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..||||||||.||++||..|++ .+.+|+|||+.+
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae------~G~~V~vlEK~~ 38 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQ------KGLSTIVLSLIP 38 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHT------TTCCEEEECSSC
T ss_pred cccEEEECchHHHHHHHHHHHH------CCCcEEEEeccC
Confidence 4699999999999999999998 456999999975
No 491
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=78.11 E-value=2.4 Score=40.79 Aligned_cols=36 Identities=25% Similarity=0.224 Sum_probs=29.7
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|.|||.|.-|-+.|..|.+.|+ ..+|+++|+++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~----~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGF----KGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTC----CSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCC----CCEEEEEECCH
Confidence 4689999999999999999998432 12899999865
No 492
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=78.04 E-value=2.6 Score=40.73 Aligned_cols=35 Identities=34% Similarity=0.367 Sum_probs=29.5
Q ss_pred CCCeEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 78 KKPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 78 ~~~~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
.+++|+|.|| |+-|...+..|.+. +++|+++++..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~ 61 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMD------GHEVTVVDNFF 61 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCS
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHC------CCEEEEEeCCC
Confidence 3578999998 99999999999984 56999998854
No 493
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=77.99 E-value=2.1 Score=43.90 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|.|||.|+-|+..|..|++.+ .+++|+++|+++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g----~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKC----PHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHC----TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcC----CCCEEEEEECCH
Confidence 358999999999999999999852 256999999865
No 494
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=77.91 E-value=2.3 Score=41.46 Aligned_cols=36 Identities=22% Similarity=0.337 Sum_probs=29.0
Q ss_pred CCeEEEECC-CHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGg-G~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|+|||+ |..|.++|..+...+. ..+++|+|...
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~----~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRL----TPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTC----CSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCC----CCEEEEEeCCc
Confidence 468999997 9999999998887542 23899999754
No 495
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=77.90 E-value=1.8 Score=41.30 Aligned_cols=36 Identities=19% Similarity=0.145 Sum_probs=27.7
Q ss_pred CeEEEECCCHHHHHHHHHhhhccccCCCC-CeEEEEeC
Q 010331 80 PRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQ 116 (513)
Q Consensus 80 ~~VVIVGgG~AGl~aA~~L~~~~~~~~~~-~~V~lIe~ 116 (513)
.+|.|||+|.-|...|..|.+.+.. ..+ ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~-~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAA-TDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH-TTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccc-cCCCCCEEEEEc
Confidence 4899999999999999999985000 004 59999987
No 496
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=77.82 E-value=1.7 Score=42.18 Aligned_cols=36 Identities=22% Similarity=0.148 Sum_probs=28.6
Q ss_pred CCeEEEEC-CCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILG-GGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVG-gG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.+|+|+| +|+.|.+.+..|...+ ...+|+++|.++
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g----~~~ev~l~Di~~ 44 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNP----LVSVLHLYDVVN 44 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCT----TEEEEEEEESSS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC----CCCEEEEEeCCC
Confidence 35899999 7999999999998732 114899999765
No 497
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=77.73 E-value=1.8 Score=46.28 Aligned_cols=45 Identities=7% Similarity=-0.043 Sum_probs=33.5
Q ss_pred CCccccCCCCEEEEcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHCC
Q 010331 375 ETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 426 (513)
Q Consensus 375 ~~l~~~~~p~VfaiGD~a~~~~~~g~~~~~~a~~A~~qg~~~a~ni~~~l~~ 426 (513)
...++ +.|++||+|||+... ....+..+..+|.+++.++...+.+
T Consensus 446 ~~~~t-~v~gl~a~Ge~~~~~------~hg~~~~sl~~g~~ag~~a~~~~~~ 490 (662)
T 3gyx_A 446 YNRMT-TVEGLWTCADGVGAS------GHKFSSGSHAEGRIVGKQMVRWYLD 490 (662)
T ss_dssp CTTBC-SSBTEECCSSSBCSC------CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCC-ccCCeEeCccccccc------cCccHhHHHHHHHHHHHHHHHHHhh
Confidence 45666 899999999998641 1223667788899999888877654
No 498
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=77.73 E-value=2 Score=41.42 Aligned_cols=36 Identities=17% Similarity=0.294 Sum_probs=29.1
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
+.+|+|||+|..|.+.|..|...+. --++.|+|.+.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~----~~el~L~Di~~ 40 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGI----AEEFVIVDVVK 40 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTC----CSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCC----CCEEEEEeCCc
Confidence 4689999999999999999987432 23899999743
No 499
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=77.69 E-value=1.9 Score=41.44 Aligned_cols=34 Identities=15% Similarity=0.114 Sum_probs=29.3
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCC-eEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~-~V~lIe~~~ 118 (513)
..+|.|||.|.-|...|..|.+. ++ +|+++|+++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~------G~~~V~~~dr~~ 58 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA------GAIDMAAYDAAS 58 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH------SCCEEEEECSSC
T ss_pred CCEEEEECccHHHHHHHHHHHHC------CCCeEEEEcCCC
Confidence 46899999999999999999984 56 899999864
No 500
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=77.67 E-value=2.3 Score=41.21 Aligned_cols=36 Identities=25% Similarity=0.251 Sum_probs=29.4
Q ss_pred CCeEEEECCCHHHHHHHHHhhhccccCCCCCeEEEEeCCC
Q 010331 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (513)
Q Consensus 79 ~~~VVIVGgG~AGl~aA~~L~~~~~~~~~~~~V~lIe~~~ 118 (513)
..+|.|||+|..|.++|..|+..+. --+++|+|.+.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~----~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDL----ADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCC----CSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC----CCeEEEEECCH
Confidence 4699999999999999999987432 12899999854
Done!