Query         010334
Match_columns 513
No_of_seqs    178 out of 2033
Neff          11.5
Searched_HMMs 46136
Date          Thu Mar 28 23:19:14 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010334.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010334hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0   1E-84 2.2E-89  611.4  47.3  457   38-509    23-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 1.9E-83 4.1E-88  592.5  39.9  454   38-509    28-499 (499)
  3 PLN02183 ferulate 5-hydroxylas 100.0 2.4E-80 5.2E-85  605.2  48.4  475   33-510    28-513 (516)
  4 PLN03234 cytochrome P450 83B1; 100.0 7.5E-80 1.6E-84  601.7  48.3  466   37-509    24-499 (499)
  5 PLN02971 tryptophan N-hydroxyl 100.0 7.6E-79 1.6E-83  596.3  47.3  463   38-510    54-535 (543)
  6 PLN02687 flavonoid 3'-monooxyg 100.0 3.4E-78 7.4E-83  590.2  48.3  465   38-509    31-509 (517)
  7 PLN02966 cytochrome P450 83A1  100.0 8.4E-78 1.8E-82  585.9  47.1  466   35-507    23-498 (502)
  8 PLN03112 cytochrome P450 famil 100.0 1.4E-77 3.1E-82  587.3  48.7  469   36-511    27-510 (514)
  9 PLN00110 flavonoid 3',5'-hydro 100.0 2.8E-77   6E-82  579.9  46.4  462   36-510    26-498 (504)
 10 PLN02290 cytokinin trans-hydro 100.0 1.4E-77   3E-82  587.6  39.0  456   38-510    39-516 (516)
 11 PTZ00404 cytochrome P450; Prov 100.0 4.8E-77   1E-81  579.4  42.4  459   24-508    12-482 (482)
 12 PLN00168 Cytochrome P450; Prov 100.0 2.4E-76 5.3E-81  577.4  47.4  469   37-510    31-518 (519)
 13 PLN02394 trans-cinnamate 4-mon 100.0 1.1E-75 2.5E-80  572.8  45.5  463   37-510    26-503 (503)
 14 KOG0157 Cytochrome P450 CYP4/C 100.0 7.5E-77 1.6E-81  571.4  35.3  455   39-509    33-496 (497)
 15 PLN02655 ent-kaurene oxidase   100.0 6.7E-75 1.4E-79  560.2  41.2  448   43-510     1-465 (466)
 16 PLN02500 cytochrome P450 90B1  100.0 1.1E-74 2.4E-79  562.9  41.8  437   37-507    34-488 (490)
 17 PLN03018 homomethionine N-hydr 100.0 9.9E-74 2.1E-78  555.5  47.6  463   38-509    37-524 (534)
 18 PLN02738 carotene beta-ring hy 100.0 1.6E-73 3.4E-78  559.4  41.2  458   39-512   113-598 (633)
 19 PLN02169 fatty acid (omega-1)- 100.0 1.3E-73 2.9E-78  553.0  39.1  449   41-509    31-500 (500)
 20 KOG0159 Cytochrome P450 CYP11/ 100.0 2.5E-73 5.5E-78  512.1  36.6  450   39-509    48-518 (519)
 21 PLN02774 brassinosteroid-6-oxi 100.0 8.8E-73 1.9E-77  545.0  41.2  431   38-507    28-462 (463)
 22 PLN03195 fatty acid omega-hydr 100.0 5.4E-73 1.2E-77  554.6  39.3  451   42-509    31-516 (516)
 23 PLN02196 abscisic acid 8'-hydr 100.0 3.4E-72 7.4E-77  540.3  39.7  428   37-508    31-462 (463)
 24 KOG0684 Cytochrome P450 [Secon 100.0 6.8E-72 1.5E-76  489.8  34.0  443   41-510    31-486 (486)
 25 PF00067 p450:  Cytochrome P450 100.0 7.8E-73 1.7E-77  553.8  27.8  449   43-505     1-463 (463)
 26 PLN03141 3-epi-6-deoxocathaste 100.0 4.9E-71 1.1E-75  531.7  39.0  439   37-510     3-451 (452)
 27 PLN02302 ent-kaurenoic acid ox 100.0 1.3E-69 2.7E-74  530.4  44.0  439   37-509    38-488 (490)
 28 PLN02987 Cytochrome P450, fami 100.0 1.3E-69 2.9E-74  519.9  41.5  435   37-509    26-469 (472)
 29 PLN02936 epsilon-ring hydroxyl 100.0 7.4E-69 1.6E-73  520.2  38.0  450   44-511    15-484 (489)
 30 PLN02426 cytochrome P450, fami 100.0 9.6E-68 2.1E-72  511.1  39.1  435   49-510    49-501 (502)
 31 PLN02648 allene oxide synthase 100.0 2.1E-60 4.6E-65  452.2  27.0  405   38-480    14-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.3E-55 2.8E-60  415.1  32.9  383   63-508    24-410 (411)
 33 PF08492 SRP72:  SRP72 RNA-bind  78.3     1.4 2.9E-05   28.2   1.3    8  423-430    44-51  (59)
 34 PF12554 MOZART1:  Mitotic-spin  69.4      15 0.00033   22.4   4.2   43  301-343     5-47  (48)
 35 PF05952 ComX:  Bacillus compet  50.4      14 0.00031   23.5   1.9   18  325-342     5-22  (57)
 36 PF09201 SRX:  SRX;  InterPro:   47.3      15 0.00032   28.2   1.9   22  449-470    18-39  (148)
 37 KOG3506 40S ribosomal protein   41.1      13 0.00027   23.2   0.6   11  442-452    12-22  (56)
 38 PHA03049 IMV membrane protein;  39.9      75  0.0016   20.8   3.9   29   18-46      8-36  (68)
 39 COG0851 MinE Septum formation   39.9      58  0.0013   22.9   3.7   18  332-349    35-52  (88)
 40 PF08114 PMP1_2:  ATPase proteo  38.5      20 0.00043   20.7   1.1   17   20-36     20-36  (43)
 41 PF12508 DUF3714:  Protein of u  37.0      22 0.00049   29.8   1.7   44  360-404    51-94  (200)
 42 PF14129 DUF4296:  Domain of un  36.9 1.5E+02  0.0033   20.9   6.4   50  298-347    29-78  (87)
 43 PF14483 Cut8_M:  Cut8 dimerisa  36.2      52  0.0011   19.0   2.6   12  330-341    24-35  (38)
 44 TIGR03779 Bac_Flav_CT_M Bacter  32.0      10 0.00023   35.6  -1.1   44  360-404   254-297 (410)
 45 PHA03162 hypothetical protein;  29.9      44 0.00095   25.4   2.0   24  445-468     2-25  (135)
 46 KOG3653 Transforming growth fa  28.3   2E+02  0.0044   27.9   6.4   28   72-99    221-249 (534)
 47 PF13893 RRM_5:  RNA recognitio  27.8 1.6E+02  0.0034   18.3   4.4   35   67-101     1-39  (56)
 48 PRK06789 flagellar motor switc  27.5      51  0.0011   22.5   1.9   39  368-406    22-63  (74)
 49 PF15300 INT_SG_DDX_CT_C:  INTS  26.9      30 0.00065   22.8   0.7   15  361-375    40-54  (65)
 50 PRK13991 cell division topolog  26.0 1.3E+02  0.0028   21.3   3.7   18  332-349    35-52  (87)
 51 COG1759 5-formaminoimidazole-4  24.3 1.4E+02   0.003   27.2   4.4   41  365-405   276-324 (361)
 52 PF08776 VASP_tetra:  VASP tetr  24.0      70  0.0015   18.6   1.7   29  332-373     9-37  (40)
 53 PF14550 Peptidase_U35_2:  Puta  23.9      47   0.001   25.3   1.3   33  382-417    70-102 (122)
 54 PF05961 Chordopox_A13L:  Chord  23.6   2E+02  0.0044   19.0   3.9   18   18-35      8-25  (68)
 55 PHA02681 ORF089 virion membran  23.1 1.4E+02  0.0031   20.5   3.3    8   65-72     55-62  (92)
 56 TIGR00589 ogt O-6-methylguanin  22.8 1.8E+02   0.004   20.2   4.0   60  334-394     2-66  (80)
 57 PF13625 Helicase_C_3:  Helicas  22.8 1.8E+02   0.004   22.3   4.5   39   63-103    76-114 (129)
 58 PRK13467 F0F1 ATP synthase sub  22.6 1.3E+02  0.0028   20.0   3.0   24  319-342    20-43  (66)
 59 PF15330 SIT:  SHP2-interacting  21.9 1.4E+02   0.003   22.2   3.4   12   48-59     45-56  (107)
 60 PF08285 DPM3:  Dolichol-phosph  21.4 1.3E+02  0.0027   21.6   3.0   27  321-347    55-81  (91)
 61 PF12444 Sox_N:  Sox developmen  20.9      63  0.0014   22.7   1.4   21  459-479    60-80  (84)
 62 PF15050 SCIMP:  SCIMP protein   20.8 2.2E+02  0.0047   21.5   4.1   15   41-55     68-83  (133)
 63 PF10264 Stork_head:  Winged he  20.8 2.8E+02  0.0062   19.3   4.4   39  319-357    13-53  (80)
 64 PF11227 DUF3025:  Protein of u  20.6      53  0.0012   27.7   1.1   25  402-426   186-211 (212)
 65 PF07849 DUF1641:  Protein of u  20.1 1.1E+02  0.0023   18.1   2.1   20  322-341    12-31  (42)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1e-84  Score=611.42  Aligned_cols=457  Identities=47%  Similarity=0.816  Sum_probs=396.4

Q ss_pred             CCCCCCCCCCCCcccccccccCCCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCC-ccch
Q 010334           38 GQGKQPPGPKPLPILGNLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPE-VYAV  116 (513)
Q Consensus        38 ~~~~~~PgP~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~-~~~~  116 (513)
                      ++.+.||||+++|++||++++....++..+.++.++||++|.+++|..++|||+|++.++|++++++..|+.|+. ....
T Consensus        23 ~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~  102 (489)
T KOG0156|consen   23 KRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL  102 (489)
T ss_pred             CCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence            337899999999999999999554599999999999999999999999999999999999999999999999997 2344


Q ss_pred             hhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHh-cCCCceehHHHHHHHHHHHHHHH
Q 010334          117 EIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISS-NQGRPINLSEKIFTMTNDIIARA  195 (513)
Q Consensus       117 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~-~~~~~~d~~~~~~~~~~dvi~~~  195 (513)
                      .....++.+++++.+|+.|+++||+....+++.+.++.....-.++++.+++.+.. ..++++|+.+.+..++.++|+++
T Consensus       103 ~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~  182 (489)
T KOG0156|consen  103 KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRM  182 (489)
T ss_pred             HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHH
Confidence            55565677888998999999999999999999999999888889999999999885 22279999999999999999999


Q ss_pred             HhcCCCCch-----hhHHHHHHHHHHhccccccccccc-ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010334          196 AFGRKNSDQ-----HNFTVLLEEIMKIGAGFAIADLYP-SLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAAA  269 (513)
Q Consensus       196 ~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  269 (513)
                      +||.++...     .++...+.+..+....+...+.+| ++.++....+..+........+..+++..++++++.. .  
T Consensus       183 ~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~--  259 (489)
T KOG0156|consen  183 LFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-G--  259 (489)
T ss_pred             HhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c--
Confidence            999998752     235667777777777777888888 4555443345556666666678999999999987755 1  


Q ss_pred             ccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcC
Q 010334          270 NNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACKG  349 (513)
Q Consensus       270 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~  349 (513)
                       .   .+..|+++.+++..+.+....  +++++|...+.++++||+|||++|+.|++.+|++||++|+|+|+||+++++.
T Consensus       260 -~---~~~~D~vD~lL~~~~~~~~~~--~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~  333 (489)
T KOG0156|consen  260 -D---EEGRDFVDALLKLMKEEKAEG--LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGK  333 (489)
T ss_pred             -c---CCCCcHHHHHHHhhcccccCC--CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence             1   122899999999866533322  9999999999999999999999999999999999999999999999999998


Q ss_pred             CCccchhhccCCchHHHHHHhhccCCCCCcCc-cccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCCCCCccc
Q 010334          350 KSKIQEADIQKLDYLKLVIKETFRLHAPGPFT-PREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECFRPERFE  428 (513)
Q Consensus       350 ~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~  428 (513)
                      ++.++.+|+.+||||+|||+|++|++|++|.. +|.+++|++++||.|||||.|+++.+++|+||++|+||++|+||||+
T Consensus       334 ~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl  413 (489)
T KOG0156|consen  334 GRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFL  413 (489)
T ss_pred             CCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhc
Confidence            88799999999999999999999999999987 99999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceEEeecc
Q 010334          429 GSSTDFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQVIATTR  508 (513)
Q Consensus       429 ~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  508 (513)
                      +++ +.......++|||.|+|.|||..+|.+++.++++.||++|+|++.++    .+++.+. +++...+.++.+...+|
T Consensus       414 ~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~-~~~~~~~~pl~~~~~~r  487 (489)
T KOG0156|consen  414 DSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEA-GLTLKKKKPLKAVPVPR  487 (489)
T ss_pred             CCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCccc-ccceecCCcceeeeecC
Confidence            875 22336678999999999999999999999999999999999999866    3456555 36677777888888887


Q ss_pred             C
Q 010334          509 I  509 (513)
Q Consensus       509 ~  509 (513)
                      .
T Consensus       488 ~  488 (489)
T KOG0156|consen  488 L  488 (489)
T ss_pred             C
Confidence            5


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.9e-83  Score=592.50  Aligned_cols=454  Identities=28%  Similarity=0.449  Sum_probs=357.8

Q ss_pred             CCCCCCCCCCCCcccccccccCCC-CChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCC--Ccc
Q 010334           38 GQGKQPPGPKPLPILGNLHQLADG-QPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRP--EVY  114 (513)
Q Consensus        38 ~~~~~~PgP~~~p~lG~~~~~~~~-~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~--~~~  114 (513)
                      ...+++|+|++.|++||+..+... .......+.+.+||++++++.+.++.++|+||+++++|+.++..+|.++.  ...
T Consensus        28 w~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~  107 (499)
T KOG0158|consen   28 WRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYG  107 (499)
T ss_pred             hccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcC
Confidence            344699999999999999887532 23445555555559999999999999999999999999999999998853  222


Q ss_pred             chhhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHhcCC--CceehHHHHHHHHHHHH
Q 010334          115 AVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISSNQG--RPINLSEKIFTMTNDII  192 (513)
Q Consensus       115 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~--~~~d~~~~~~~~~~dvi  192 (513)
                      .... . .....++...|+.||++|..+ +|.|++++++.+.+.+++.+.++++.+.....  ..+++.+.+.+++.|||
T Consensus       108 d~~~-~-l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI  184 (499)
T KOG0158|consen  108 DPED-P-LSALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVI  184 (499)
T ss_pred             CCCC-c-ccccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHH
Confidence            1111 1 123567788899999999996 99999999999999999999999999985322  47899999999999999


Q ss_pred             HHHHhcCCCCchh----hHHHHHHHHHHh-cccccc----cccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 010334          193 ARAAFGRKNSDQH----NFTVLLEEIMKI-GAGFAI----ADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKL  263 (513)
Q Consensus       193 ~~~~fG~~~~~~~----~~~~~~~~~~~~-~~~~~~----~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  263 (513)
                      ++++||.+.+...    .+.......... .....+    ...+|.+....   ............+.+.+...++.|.+
T Consensus       185 ~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l---~~~~~~~~~~~~~~~~v~~~v~~R~~  261 (499)
T KOG0158|consen  185 GSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL---RVKLFPEDVTDFFRKLVNSRVEQREK  261 (499)
T ss_pred             hHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh---hcccChHHHHHHHHHHHHHHHHHHHh
Confidence            9999999876532    333222222222 111111    11222221110   00111223344455555555555511


Q ss_pred             HHHhhhccCcccccchHHHHHHHHHHh--cCCCCC-CCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHH
Q 010334          264 KRKAAANNNVKLEEEDLVDTLLNYAEA--TNKNEF-HLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQ  340 (513)
Q Consensus       264 ~~~~~~~~~~~~~~~d~~~~l~~~~~~--~~~~~~-~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~  340 (513)
                      .         ...+.|+++.+++....  ...... .++.+||+++++.|++||.||||+|+++++|+||+|||+|+|||
T Consensus       262 ~---------~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLr  332 (499)
T KOG0158|consen  262 E---------NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLR  332 (499)
T ss_pred             c---------CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHH
Confidence            1         14688999999998753  111112 59999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCccchhhccCCchHHHHHHhhccCCCCCcCccccccccceee-CcccCCCCEEEEeccccccCCCCCCCC
Q 010334          341 EEVRQACKGKSKIQEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEIR-GYTIPAKAKILINLHAIGRDPTVWKDP  419 (513)
Q Consensus       341 ~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~-g~~ip~G~~v~~~~~~~~~d~~~~~~p  419 (513)
                      +||++++.+...+|+|.+.+|+||++||+||||+||+++...|+|++|++++ ++.||||+.|.++.+++||||++||||
T Consensus       333 eEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~P  412 (499)
T KOG0158|consen  333 EEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEP  412 (499)
T ss_pred             HHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCc
Confidence            9999998766559999999999999999999999999999999999999999 999999999999999999999999999


Q ss_pred             CCCCCCcccCCCCCccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccC
Q 010334          420 ECFRPERFEGSSTDFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKE  499 (513)
Q Consensus       420 ~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (513)
                      ++|+||||++++.+ ..++..|+|||.|||+|+|.+||++|+|++|+.||++|+++..+ ++... ......+++..|++
T Consensus       413 e~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~-~t~~~-~~~~~~~~~l~pk~  489 (499)
T KOG0158|consen  413 EKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP-TTIIP-LEGDPKGFTLSPKG  489 (499)
T ss_pred             ccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC-cccCc-ccCCccceeeecCC
Confidence            99999999987754 34678999999999999999999999999999999999999987 43333 22233477889999


Q ss_pred             CceEEeeccC
Q 010334          500 NLQVIATTRI  509 (513)
Q Consensus       500 ~~~~~~~~r~  509 (513)
                      |+++++++|.
T Consensus       490 gi~Lkl~~r~  499 (499)
T KOG0158|consen  490 GIWLKLEPRD  499 (499)
T ss_pred             ceEEEEEeCC
Confidence            9999999984


No 3  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2.4e-80  Score=605.21  Aligned_cols=475  Identities=40%  Similarity=0.760  Sum_probs=372.2

Q ss_pred             hhCCCCCCCCCCCCCCCcccccccccCCCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCC
Q 010334           33 WKNSNGQGKQPPGPKPLPILGNLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPE  112 (513)
Q Consensus        33 ~~~~~~~~~~~PgP~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~  112 (513)
                      +.+..++.+.||||+++|++|+++.+ ....+..+.+|+++||++|++++++.++|+|+||+.+++|+.++...|..++.
T Consensus        28 ~~~~~~~~~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~  106 (516)
T PLN02183         28 ISRLRRRLPYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPA  106 (516)
T ss_pred             HhhccCCCCCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCc
Confidence            44444566789999999999999877 33466789999999999999999999999999999999999887777777654


Q ss_pred             ccchhhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHH
Q 010334          113 VYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISSNQGRPINLSEKIFTMTNDII  192 (513)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~dvi  192 (513)
                      ..........+..++++.+|+.|+++|+++..+.|+.+.++.+.+.. +++..+++.+.+..++++|+.+++..+++|++
T Consensus       107 ~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi  185 (516)
T PLN02183        107 NIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSNIGKPVNIGELIFTLTRNIT  185 (516)
T ss_pred             ccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHH
Confidence            33222222122456788889999999998657899999999888864 67888998887555778999999999999999


Q ss_pred             HHHHhcCCCCch-hhHHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-
Q 010334          193 ARAAFGRKNSDQ-HNFTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAAAN-  270 (513)
Q Consensus       193 ~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-  270 (513)
                      +.++||.+.+.. +++...+..+............+|++.++.+ ....++..+..+.+.+++.+.++++.++...... 
T Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  264 (516)
T PLN02183        186 YRAAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDP-QGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNAD  264 (516)
T ss_pred             HhHhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            999999876543 3445555544443333333344554432211 1123455666777888888888776544322100 


Q ss_pred             cCcccccchHHHHHHHHHHhcC--------CCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHH
Q 010334          271 NNVKLEEEDLVDTLLNYAEATN--------KNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEE  342 (513)
Q Consensus       271 ~~~~~~~~d~~~~l~~~~~~~~--------~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~E  342 (513)
                      ........|+++.+++....+.        .....++++++..++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       265 ~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~E  344 (516)
T PLN02183        265 NDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQE  344 (516)
T ss_pred             cccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            0001134589999997543211        01225899999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCccchhhccCCchHHHHHHhhccCCCCCcCccccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCC
Q 010334          343 VRQACKGKSKIQEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECF  422 (513)
Q Consensus       343 i~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  422 (513)
                      |+++++.+..++.+++.+||||+|||+||||++|++|...|++.+|++++||.|||||.|.++.+.+||||++|+||++|
T Consensus       345 i~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F  424 (516)
T PLN02183        345 LADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTF  424 (516)
T ss_pred             HHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCcccc
Confidence            99999766678999999999999999999999999999899999999999999999999999999999999999999999


Q ss_pred             CCCcccCCCCC-ccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCc
Q 010334          423 RPERFEGSSTD-FKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENL  501 (513)
Q Consensus       423 ~P~R~~~~~~~-~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (513)
                      +||||++++.. .......|+|||+|+|+|+|++||++|+++++|+|+++|++++.++...+.++....++.+..+..++
T Consensus       425 ~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (516)
T PLN02183        425 KPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRL  504 (516)
T ss_pred             CchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCc
Confidence            99999975432 12345689999999999999999999999999999999999987764333345545556655566688


Q ss_pred             eEEeeccCC
Q 010334          502 QVIATTRIP  510 (513)
Q Consensus       502 ~~~~~~r~~  510 (513)
                      .+.+++|..
T Consensus       505 ~~~~~~r~~  513 (516)
T PLN02183        505 VAVPTYRLQ  513 (516)
T ss_pred             EEEeecCCC
Confidence            999998853


No 4  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=7.5e-80  Score=601.68  Aligned_cols=466  Identities=39%  Similarity=0.682  Sum_probs=375.0

Q ss_pred             CCCCCCCCCCCCCcccccccccCCCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccch
Q 010334           37 NGQGKQPPGPKPLPILGNLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAV  116 (513)
Q Consensus        37 ~~~~~~~PgP~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~~  116 (513)
                      +++.+.||||+++|++||+.++...++..++.+++++||++|++++++.++++++||+++++|+.++...|..++.....
T Consensus        24 ~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~  103 (499)
T PLN03234         24 KKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQ  103 (499)
T ss_pred             CCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhh
Confidence            45667899999999999999885446888999999999999999999999999999999999998887778777654332


Q ss_pred             hhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHh--cCCCceehHHHHHHHHHHHHHH
Q 010334          117 EIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISS--NQGRPINLSEKIFTMTNDIIAR  194 (513)
Q Consensus       117 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~--~~~~~~d~~~~~~~~~~dvi~~  194 (513)
                      ......+....+...++.|+++|+.+..+.|+.++++.+.+.+.+.++++++.+..  +.++++|+.+++..+++|++++
T Consensus       104 ~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~  183 (499)
T PLN03234        104 QTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCR  183 (499)
T ss_pred             hhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHH
Confidence            22222223334556688999999986578999999999999999999999999863  3467899999999999999999


Q ss_pred             HHhcCCCCchh----hHHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 010334          195 AAFGRKNSDQH----NFTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAAAN  270 (513)
Q Consensus       195 ~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  270 (513)
                      ++||.+++...    .+...............+...+|++..+..+.+..++..++.+.+.+++.+.++++++....   
T Consensus       184 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---  260 (499)
T PLN03234        184 QAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRP---  260 (499)
T ss_pred             HHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc---
Confidence            99999876432    22333333332222222333445443322222333456677888888888888876533211   


Q ss_pred             cCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcCC
Q 010334          271 NNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACKGK  350 (513)
Q Consensus       271 ~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~  350 (513)
                         .....|+++.|++..++ ......++++++.+++.++++||+||||++++|++++|++||++|+|+++|+++++++.
T Consensus       261 ---~~~~~d~l~~l~~~~~~-~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~  336 (499)
T PLN03234        261 ---KQETESFIDLLMQIYKD-QPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDK  336 (499)
T ss_pred             ---CCCcccHHHHHHHHhhc-cCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC
Confidence               12346889988875433 11123589999999999999999999999999999999999999999999999999877


Q ss_pred             CccchhhccCCchHHHHHHhhccCCCCCcCc-cccccccceeeCcccCCCCEEEEeccccccCCCCC-CCCCCCCCCccc
Q 010334          351 SKIQEADIQKLDYLKLVIKETFRLHAPGPFT-PREAREKCEIRGYTIPAKAKILINLHAIGRDPTVW-KDPECFRPERFE  428 (513)
Q Consensus       351 ~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~~  428 (513)
                      ..++++++.+||||+|||+|+||++|+++.. .|.+.+|++++||.|||||.|.++++.+|+||++| +||++|+||||+
T Consensus       337 ~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l  416 (499)
T PLN03234        337 GYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFM  416 (499)
T ss_pred             CCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhc
Confidence            7789999999999999999999999999986 79999999999999999999999999999999999 899999999999


Q ss_pred             CCCCC--ccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceEEee
Q 010334          429 GSSTD--FKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQVIAT  506 (513)
Q Consensus       429 ~~~~~--~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (513)
                      ++...  .......|+|||+|+|+|+|+++|++|++++++.|+++|++++.++...+.++.....++..++++.+++.++
T Consensus       417 ~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (499)
T PLN03234        417 KEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPT  496 (499)
T ss_pred             CCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEee
Confidence            75432  1234568999999999999999999999999999999999999876444556666777888889999999998


Q ss_pred             ccC
Q 010334          507 TRI  509 (513)
Q Consensus       507 ~r~  509 (513)
                      +|.
T Consensus       497 ~~~  499 (499)
T PLN03234        497 KHI  499 (499)
T ss_pred             cCC
Confidence            884


No 5  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=7.6e-79  Score=596.34  Aligned_cols=463  Identities=27%  Similarity=0.503  Sum_probs=362.3

Q ss_pred             CCCCCCCCCCCCcccccccccCCCC-ChHHHHHHHHhcC-CcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccc
Q 010334           38 GQGKQPPGPKPLPILGNLHQLADGQ-PHHVMTKLCRKYG-PVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYA  115 (513)
Q Consensus        38 ~~~~~~PgP~~~p~lG~~~~~~~~~-~~~~~~~~~~kyG-~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~  115 (513)
                      ++.+.||||+++|++||++++..+. .+.++.++.++|| ++|++++|+.++|+|+||+.+++++.++...|.+++....
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~  133 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA  133 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence            3557899999999999998875433 3677899999999 7999999999999999999999999988888888875443


Q ss_pred             hhhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHh--cCCCceehHHHHHHHHHHHHH
Q 010334          116 VEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISS--NQGRPINLSEKIFTMTNDIIA  193 (513)
Q Consensus       116 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~--~~~~~~d~~~~~~~~~~dvi~  193 (513)
                      ....+.+..++++..+|+.|+++|+++....++...++.+.+.+.++++.+++.+.+  ..++++|+.+.+.++++++++
T Consensus       134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  213 (543)
T PLN02971        134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIK  213 (543)
T ss_pred             hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHH
Confidence            333332223457888899999999998667787777888888999988888888763  345689999999999999999


Q ss_pred             HHHhcCCCCc------hh---hHHHHHHHHHHhccc---ccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 010334          194 RAAFGRKNSD------QH---NFTVLLEEIMKIGAG---FAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEH  261 (513)
Q Consensus       194 ~~~fG~~~~~------~~---~~~~~~~~~~~~~~~---~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  261 (513)
                      +++||.+...      .+   +....+...+.....   ..+...+|++..+. ..+..+...+..+.+.+++...++++
T Consensus       214 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~  292 (543)
T PLN02971        214 RLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLD-LNGHEKIMRESSAIMDKYHDPIIDER  292 (543)
T ss_pred             HHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999987522      11   122233333322111   11223344433221 11223334445666788888888776


Q ss_pred             HHHHHhhhccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHH
Q 010334          262 KLKRKAAANNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQE  341 (513)
Q Consensus       262 ~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~  341 (513)
                      ++..+.   +. .....|+++.|++..+..  ....++++++.+++.++++||+|||+++++|++++|++|||+|+|+++
T Consensus       293 ~~~~~~---~~-~~~~~d~l~~ll~~~~~~--~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~  366 (543)
T PLN02971        293 IKMWRE---GK-RTQIEDFLDIFISIKDEA--GQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAME  366 (543)
T ss_pred             HHHHhc---cC-CCCCcCHHHHHHhhhccc--CCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            543321   10 112468999999854321  112489999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCccchhhccCCchHHHHHHhhccCCCCCcCc-cccccccceeeCcccCCCCEEEEeccccccCCCCCCCCC
Q 010334          342 EVRQACKGKSKIQEADIQKLDYLKLVIKETFRLHAPGPFT-PREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPE  420 (513)
Q Consensus       342 Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  420 (513)
                      ||+++++++..++++++.+||||+|||+|+||++|++|.. +|.+.+|++++||.|||||.|+++.+.+||||++|+||+
T Consensus       367 EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~  446 (543)
T PLN02971        367 EIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPL  446 (543)
T ss_pred             HHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCcc
Confidence            9999998777899999999999999999999999999974 899999999999999999999999999999999999999


Q ss_pred             CCCCCcccCCCCC--ccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCcccccc
Q 010334          421 CFRPERFEGSSTD--FKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRK  498 (513)
Q Consensus       421 ~F~P~R~~~~~~~--~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (513)
                      +|+||||++++.+  ....+..|+|||+|+|+|+|++||+.|++++++.||++|++++.++..  .+++.+.++ +..-+
T Consensus       447 ~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~-~~~~~  523 (543)
T PLN02971        447 SFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSET--RVELMESSH-DMFLS  523 (543)
T ss_pred             ccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCC--CcchhhhcC-ccccc
Confidence            9999999975422  112456799999999999999999999999999999999999876543  355666666 55444


Q ss_pred             CCceEEeeccCC
Q 010334          499 ENLQVIATTRIP  510 (513)
Q Consensus       499 ~~~~~~~~~r~~  510 (513)
                      +++.+.+++|.+
T Consensus       524 ~~~~~~~~~~~~  535 (543)
T PLN02971        524 KPLVMVGELRLS  535 (543)
T ss_pred             ccceeeeeecCC
Confidence            588999999943


No 6  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=3.4e-78  Score=590.18  Aligned_cols=465  Identities=39%  Similarity=0.738  Sum_probs=371.8

Q ss_pred             CCCCCCCCCCCCcccccccccCCCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccchh
Q 010334           38 GQGKQPPGPKPLPILGNLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVE  117 (513)
Q Consensus        38 ~~~~~~PgP~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~~~  117 (513)
                      ++.+.||||.++|++|+++++. .+++..+.+|+++||++|++++++.++++++||+++++++.++...|.+++......
T Consensus        31 ~~~~~pPgp~~~P~iG~~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~  109 (517)
T PLN02687         31 HKRPLPPGPRGWPVLGNLPQLG-PKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAE  109 (517)
T ss_pred             CCCCCCccCCCCCccccHHhcC-CchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchh
Confidence            3445789999999999998884 468899999999999999999999999999999999999988777787775543322


Q ss_pred             hcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHh-cCCCceehHHHHHHHHHHHHHHHH
Q 010334          118 IMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISS-NQGRPINLSEKIFTMTNDIIARAA  196 (513)
Q Consensus       118 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~-~~~~~~d~~~~~~~~~~dvi~~~~  196 (513)
                      .....+.+.+++.+|+.|+++|+++..+.|+.++++.+.+.+.+++..+++.+.. ..++++|+.+++..+++|+|+.++
T Consensus       110 ~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~  189 (517)
T PLN02687        110 HMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAM  189 (517)
T ss_pred             hhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Confidence            2222234667888899999999997448899999999999999999999999974 345689999999999999999999


Q ss_pred             hcCCCCc------hhhHHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 010334          197 FGRKNSD------QHNFTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAAAN  270 (513)
Q Consensus       197 fG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  270 (513)
                      ||.++..      ...+...+..+............+|++.++. .........+..+.+.+++.+.++++++....   
T Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---  265 (517)
T PLN02687        190 VGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLD-LQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQT---  265 (517)
T ss_pred             hCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhC-cccHHHHHHHHHHHHHHHHHHHHHHHHHhccc---
Confidence            9987532      1234444444443322222223445433221 11122345556677778888888877654211   


Q ss_pred             cCcccccchHHHHHHHHHHhcC--CCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhc
Q 010334          271 NNVKLEEEDLVDTLLNYAEATN--KNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACK  348 (513)
Q Consensus       271 ~~~~~~~~d~~~~l~~~~~~~~--~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~  348 (513)
                        ......|+++.+++..+...  ..+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++
T Consensus       266 --~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~  343 (517)
T PLN02687        266 --GSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVG  343 (517)
T ss_pred             --cCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC
Confidence              01234689999998654311  12235999999999999999999999999999999999999999999999999988


Q ss_pred             CCCccchhhccCCchHHHHHHhhccCCCCCcCc-cccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCCCCCcc
Q 010334          349 GKSKIQEADIQKLDYLKLVIKETFRLHAPGPFT-PREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECFRPERF  427 (513)
Q Consensus       349 ~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~  427 (513)
                      ++..++.+++.+||||+|||+||||++|+++.. +|++.+|++++||.||+||.|.++.+.+|+||++|+||++|+||||
T Consensus       344 ~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRf  423 (517)
T PLN02687        344 RDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRF  423 (517)
T ss_pred             CCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhc
Confidence            777789999999999999999999999999974 9999999999999999999999999999999999999999999999


Q ss_pred             cCCCCC----ccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceE
Q 010334          428 EGSSTD----FKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQV  503 (513)
Q Consensus       428 ~~~~~~----~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (513)
                      ++++..    .......|+|||+|+|.|+|++||++|+++++++||++|++++.++...++++.....++++.+..++.+
T Consensus       424 l~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (517)
T PLN02687        424 LPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMV  503 (517)
T ss_pred             CCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEE
Confidence            975321    1123457999999999999999999999999999999999999766443344444556777777788999


Q ss_pred             EeeccC
Q 010334          504 IATTRI  509 (513)
Q Consensus       504 ~~~~r~  509 (513)
                      ++++|.
T Consensus       504 ~~~~R~  509 (517)
T PLN02687        504 HPRPRL  509 (517)
T ss_pred             eeccCC
Confidence            999996


No 7  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=8.4e-78  Score=585.93  Aligned_cols=466  Identities=35%  Similarity=0.663  Sum_probs=359.3

Q ss_pred             CCCCCCCCCCCCCCCcccccccccCCCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCcc
Q 010334           35 NSNGQGKQPPGPKPLPILGNLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVY  114 (513)
Q Consensus        35 ~~~~~~~~~PgP~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~  114 (513)
                      .+.+..+.||||+++|++||++++...+++..+.+|+++||++|++++++.++++|+||+.+++++.++...|.+++...
T Consensus        23 ~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~  102 (502)
T PLN02966         23 PKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHR  102 (502)
T ss_pred             cccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCc
Confidence            34456678999999999999998855568899999999999999999999999999999999999988776666554332


Q ss_pred             chhhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHh--cCCCceehHHHHHHHHHHHH
Q 010334          115 AVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISS--NQGRPINLSEKIFTMTNDII  192 (513)
Q Consensus       115 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~--~~~~~~d~~~~~~~~~~dvi  192 (513)
                      .......+.....+..+|+.|+++|+++..+.|+..+++.+.+.+.+.+.++++.+..  .+++++|+.+++..+++|++
T Consensus       103 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi  182 (502)
T PLN02966        103 GHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVV  182 (502)
T ss_pred             cceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHH
Confidence            2222222223344566799999999996588999999999999999999999999974  34568999999999999999


Q ss_pred             HHHHhcCCCCchh-hH---HHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010334          193 ARAAFGRKNSDQH-NF---TVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAA  268 (513)
Q Consensus       193 ~~~~fG~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (513)
                      +.++||.+++... +.   ...+...........+...+|.+..+..+.+..+...+..+...+++.+.++++...... 
T Consensus       183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-  261 (502)
T PLN02966        183 CRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRV-  261 (502)
T ss_pred             HHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcccc-
Confidence            9999999875422 22   222222222222222333444332221122122223344555666666666654432111 


Q ss_pred             hccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhc
Q 010334          269 ANNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACK  348 (513)
Q Consensus       269 ~~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~  348 (513)
                           ..+..++++.|++..++. .....++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++
T Consensus       262 -----~~~~~~~l~~l~~~~~~~-~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~  335 (502)
T PLN02966        262 -----KPETESMIDLLMEIYKEQ-PFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMK  335 (502)
T ss_pred             -----ccccccHHHHHHHHHhcc-CcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Confidence                 123468999999765432 12235899999999999999999999999999999999999999999999999986


Q ss_pred             CC--CccchhhccCCchHHHHHHhhccCCCCCcCc-cccccccceeeCcccCCCCEEEEeccccccCCCCC-CCCCCCCC
Q 010334          349 GK--SKIQEADIQKLDYLKLVIKETFRLHAPGPFT-PREAREKCEIRGYTIPAKAKILINLHAIGRDPTVW-KDPECFRP  424 (513)
Q Consensus       349 ~~--~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P  424 (513)
                      .+  ..++.+++++||||+|||+|+||++|+++.. .|.+.+|++++||.|||||.|.++++.+||||++| |||++|+|
T Consensus       336 ~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~P  415 (502)
T PLN02966        336 EKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRP  415 (502)
T ss_pred             ccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCCh
Confidence            43  3579999999999999999999999999985 89999999999999999999999999999999999 99999999


Q ss_pred             CcccCCCCCccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceEE
Q 010334          425 ERFEGSSTDFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQVI  504 (513)
Q Consensus       425 ~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (513)
                      |||++++.........|+|||+|+|+|+|++||++|++++++.||++|++++.++...+.++.....+++..+.+.+.+.
T Consensus       416 eRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (502)
T PLN02966        416 ERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLV  495 (502)
T ss_pred             hhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEE
Confidence            99996543222245679999999999999999999999999999999999998776555566666666665444455544


Q ss_pred             eec
Q 010334          505 ATT  507 (513)
Q Consensus       505 ~~~  507 (513)
                      +++
T Consensus       496 ~~~  498 (502)
T PLN02966        496 PEK  498 (502)
T ss_pred             EEe
Confidence            443


No 8  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.4e-77  Score=587.27  Aligned_cols=469  Identities=35%  Similarity=0.661  Sum_probs=371.9

Q ss_pred             CCCCCCCCCCCCCCcccccccccCCCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccc
Q 010334           36 SNGQGKQPPGPKPLPILGNLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYA  115 (513)
Q Consensus        36 ~~~~~~~~PgP~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~  115 (513)
                      .+++.+.||||+++|++||+.++. .+++.++.+++++||++|++++++.++++++||+.+++++.++...|.+++....
T Consensus        27 ~~~~~~~ppgp~~~pl~G~~~~~~-~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~  105 (514)
T PLN03112         27 MRKSLRLPPGPPRWPIVGNLLQLG-PLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLA  105 (514)
T ss_pred             ccCCCCCccCCCCCCeeeeHHhcC-CchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCccc
Confidence            355668899999999999998873 4688899999999999999999999999999999999999887777777665432


Q ss_pred             hhhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHh--cCCCceehHHHHHHHHHHHHH
Q 010334          116 VEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISS--NQGRPINLSEKIFTMTNDIIA  193 (513)
Q Consensus       116 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~--~~~~~~d~~~~~~~~~~dvi~  193 (513)
                      .....++...+++..+|+.|+++|+++..+.|+.++++.+.+.+.++++.+++.+..  ..++++|+.+.++.+++|+++
T Consensus       106 ~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~  185 (514)
T PLN03112        106 AVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVT  185 (514)
T ss_pred             ceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHH
Confidence            222222233456777899999999997567899999999999999999999987653  345789999999999999999


Q ss_pred             HHHhcCCCCch--------hhHHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010334          194 RAAFGRKNSDQ--------HNFTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKR  265 (513)
Q Consensus       194 ~~~fG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  265 (513)
                      .++||.++...        ..+......+........+...+|.+.++.+ .+..+...+..+.+.+++...++++++..
T Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  264 (514)
T PLN03112        186 RMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDP-YGCEKKMREVEKRVDEFHDKIIDEHRRAR  264 (514)
T ss_pred             HHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999876321        1233333333332211122333454332211 12234556677778888888887765543


Q ss_pred             HhhhccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHH
Q 010334          266 KAAANNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQ  345 (513)
Q Consensus       266 ~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~  345 (513)
                      ..   ........|+++.+++....+  ....++++++.+++.++++||+||||++|+|++++|++||++|+|+++||++
T Consensus       265 ~~---~~~~~~~~d~l~~ll~~~~~~--~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~  339 (514)
T PLN03112        265 SG---KLPGGKDMDFVDVLLSLPGEN--GKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDS  339 (514)
T ss_pred             cc---cccCCccchHHHHHHHhhccc--cccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            21   111123468999999854321  1225899999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCccchhhccCCchHHHHHHhhccCCCCCcCc-cccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCCCC
Q 010334          346 ACKGKSKIQEADIQKLDYLKLVIKETFRLHAPGPFT-PREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECFRP  424 (513)
Q Consensus       346 ~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  424 (513)
                      ++++++.++++++++||||+|||+||||++|+++.. +|.+.+|++++||.|||||.|.++++.+|+||++|+||++|+|
T Consensus       340 ~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~P  419 (514)
T PLN03112        340 VVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRP  419 (514)
T ss_pred             hcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCC
Confidence            988777799999999999999999999999999975 8999999999999999999999999999999999999999999


Q ss_pred             CcccCCCC---C-ccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCC
Q 010334          425 ERFEGSST---D-FKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKEN  500 (513)
Q Consensus       425 ~R~~~~~~---~-~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (513)
                      |||..+..   . .......|+|||+|+|+|+|++||++|++++++.||++|++++.++...++++....++++.+++++
T Consensus       420 eRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (514)
T PLN03112        420 ERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKP  499 (514)
T ss_pred             cccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCC
Confidence            99765321   1 1123467999999999999999999999999999999999998755433455666666777788889


Q ss_pred             ceEEeeccCCC
Q 010334          501 LQVIATTRIPF  511 (513)
Q Consensus       501 ~~~~~~~r~~~  511 (513)
                      +++.+.+|.+.
T Consensus       500 ~~~~~~~r~~~  510 (514)
T PLN03112        500 LRAVATPRLAP  510 (514)
T ss_pred             eEEEeecCCcc
Confidence            99999999753


No 9  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.8e-77  Score=579.90  Aligned_cols=462  Identities=35%  Similarity=0.704  Sum_probs=368.9

Q ss_pred             CCCCCCCCCCCCCCcccccccccCCCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccc
Q 010334           36 SNGQGKQPPGPKPLPILGNLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYA  115 (513)
Q Consensus        36 ~~~~~~~~PgP~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~  115 (513)
                      ...+.+.||||+++|++|+++.+. .+++.++.+++++||++|++++++.++|+|+||+++++++.++...|..++....
T Consensus        26 ~~~~~~~pPgp~~~Pl~G~l~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~  104 (504)
T PLN00110         26 PKPSRKLPPGPRGWPLLGALPLLG-NMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAG  104 (504)
T ss_pred             hcccCCCcccCCCCCeeechhhcC-CchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccc
Confidence            345667899999999999988773 4578899999999999999999999999999999999999888777877765432


Q ss_pred             hhhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHh--cCCCceehHHHHHHHHHHHHH
Q 010334          116 VEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISS--NQGRPINLSEKIFTMTNDIIA  193 (513)
Q Consensus       116 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~--~~~~~~d~~~~~~~~~~dvi~  193 (513)
                      ......+..+++++.+|+.|+++|+++..+.|+.++++.+.+.+.+++..+++.+.+  ..|+++|+.+++..+++|+|+
T Consensus       105 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~  184 (504)
T PLN00110        105 ATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIG  184 (504)
T ss_pred             hhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHH
Confidence            222222334567788899999999997556899999999999999999888888863  356789999999999999999


Q ss_pred             HHHhcCCC-Cc----hhhHHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010334          194 RAAFGRKN-SD----QHNFTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAA  268 (513)
Q Consensus       194 ~~~fG~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (513)
                      .++||.+. ..    .+++...+...+...........+|++.++. .....+...+..+.+.+++.+.++++++.... 
T Consensus       185 ~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-  262 (504)
T PLN00110        185 QVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMD-IQGIERGMKHLHKKFDKLLTRMIEEHTASAHE-  262 (504)
T ss_pred             HHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhC-cchHHHHHHHHHHHHHHHHHHHHHHHHhhccc-
Confidence            99999875 21    1334455554444332222234455443221 11222344555667777777777766543211 


Q ss_pred             hccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhc
Q 010334          269 ANNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACK  348 (513)
Q Consensus       269 ~~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~  348 (513)
                           .....|+++.+++..+.  ..+..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++++++
T Consensus       263 -----~~~~~d~l~~ll~~~~~--~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~  335 (504)
T PLN00110        263 -----RKGNPDFLDVVMANQEN--STGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIG  335 (504)
T ss_pred             -----cccCCChhhHHhhcccc--cCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence                 12346899999975322  12335999999999999999999999999999999999999999999999999998


Q ss_pred             CCCccchhhccCCchHHHHHHhhccCCCCCcC-ccccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCCCCCcc
Q 010334          349 GKSKIQEADIQKLDYLKLVIKETFRLHAPGPF-TPREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECFRPERF  427 (513)
Q Consensus       349 ~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~  427 (513)
                      .+..++++++++||||+|||+||||++|+++. .+|.+.+|++++||.|||||.|.++.+.+|+||++|+||++|+||||
T Consensus       336 ~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRf  415 (504)
T PLN00110        336 RNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERF  415 (504)
T ss_pred             CCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccc
Confidence            77778999999999999999999999999997 48999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcc---CCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceEE
Q 010334          428 EGSSTDFK---GNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQVI  504 (513)
Q Consensus       428 ~~~~~~~~---~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (513)
                      ++++....   .....|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+   ++.....+++.+|+.++.+.
T Consensus       416 l~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  492 (504)
T PLN00110        416 LSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVE---LNMDEAFGLALQKAVPLSAM  492 (504)
T ss_pred             cCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCc---cCcccccccccccCCCceEe
Confidence            96532211   1235799999999999999999999999999999999999876532   33334467788899999999


Q ss_pred             eeccCC
Q 010334          505 ATTRIP  510 (513)
Q Consensus       505 ~~~r~~  510 (513)
                      +++|.+
T Consensus       493 ~~~r~~  498 (504)
T PLN00110        493 VTPRLH  498 (504)
T ss_pred             eccCCC
Confidence            999963


No 10 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.4e-77  Score=587.58  Aligned_cols=456  Identities=23%  Similarity=0.375  Sum_probs=355.8

Q ss_pred             CCCCCCCCCCCCcccccccccCC------------------CCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHH
Q 010334           38 GQGKQPPGPKPLPILGNLHQLAD------------------GQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEV   99 (513)
Q Consensus        38 ~~~~~~PgP~~~p~lG~~~~~~~------------------~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i   99 (513)
                      ....+||||+++|++||++++..                  .+....+.+|+++||++|++++++.++++++||+.++++
T Consensus        39 ~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~i  118 (516)
T PLN02290         39 MERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKEL  118 (516)
T ss_pred             HHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHH
Confidence            35578999999999999987631                  223345688999999999999999999999999999999


Q ss_pred             HHhcccccCCCCCccchhhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHh---cCCC
Q 010334          100 LKTNEIKFAQRPEVYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISS---NQGR  176 (513)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~---~~~~  176 (513)
                      +.++. .+..++...........+.+ ++..+|+.|+++|+++ .+.|+..+++.+.+.+.++++.+++.+..   .+++
T Consensus       119 l~~~~-~~~~r~~~~~~~~~~~~g~~-l~~~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  195 (516)
T PLN02290        119 LTKYN-TVTGKSWLQQQGTKHFIGRG-LLMANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQT  195 (516)
T ss_pred             HhcCC-CCCCCcchhhhHHHHHhcCC-ccccCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            98763 34444322111111111333 4566899999999996 78999999999999999999999999974   2235


Q ss_pred             ceehHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHH
Q 010334          177 PINLSEKIFTMTNDIIARAAFGRKNSDQHNFTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILED  256 (513)
Q Consensus       177 ~~d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (513)
                      ++|+.+++..+++|++++++||.++...++....+..+............+|.+.++.  .+..+...+..+.+.+++.+
T Consensus       196 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p--~~~~~~~~~~~~~~~~~~~~  273 (516)
T PLN02290        196 EVEIGEYMTRLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFP--SKYNREIKSLKGEVERLLME  273 (516)
T ss_pred             eEEhHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCC--ChhHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999999987654444444444433222111111233322211  11223445566778888888


Q ss_pred             HHHHHHHHHHhhhccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhH
Q 010334          257 IVAEHKLKRKAAANNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVM  336 (513)
Q Consensus       257 ~i~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~  336 (513)
                      .++++++.....   .......|+++.+++..+.....+..++++++.+++.++++||+|||+++++|++++|++||++|
T Consensus       274 ~i~~~~~~~~~~---~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq  350 (516)
T PLN02290        274 IIQSRRDCVEIG---RSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQ  350 (516)
T ss_pred             HHHHHHHHhhcc---cCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHH
Confidence            888776543221   11123468999999754432222335889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCccchhhccCCchHHHHHHhhccCCCCCcCccccccccceeeCcccCCCCEEEEeccccccCCCCC
Q 010334          337 KKAQEEVRQACKGKSKIQEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEIRGYTIPAKAKILINLHAIGRDPTVW  416 (513)
Q Consensus       337 ~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~  416 (513)
                      +|+++||+++++++ .++++++++||||+|||+||||++|+++..+|.+.+|++++||.|||||.|.++.+.+|+||++|
T Consensus       351 ~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~  429 (516)
T PLN02290        351 DKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELW  429 (516)
T ss_pred             HHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhhh
Confidence            99999999998764 78999999999999999999999999998899999999999999999999999999999999999


Q ss_pred             -CCCCCCCCCcccCCCCCccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccc
Q 010334          417 -KDPECFRPERFEGSSTDFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTA  495 (513)
Q Consensus       417 -~~p~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  495 (513)
                       +||++|+||||++.+.   .....|+|||.|+|+|+|++||++|++++++.||++|++++.++...   ..  ..+++.
T Consensus       430 ~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~---~~--~~~~~~  501 (516)
T PLN02290        430 GKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRH---AP--VVVLTI  501 (516)
T ss_pred             CCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCccc---Cc--cceeee
Confidence             8999999999995431   12357899999999999999999999999999999999998765321   11  125778


Q ss_pred             cccCCceEEeeccCC
Q 010334          496 RRKENLQVIATTRIP  510 (513)
Q Consensus       496 ~~~~~~~~~~~~r~~  510 (513)
                      +|+++++|++++|.+
T Consensus       502 ~p~~~~~~~~~~~~~  516 (516)
T PLN02290        502 KPKYGVQVCLKPLNP  516 (516)
T ss_pred             cCCCCCeEEEEeCCC
Confidence            899999999999975


No 11 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=4.8e-77  Score=579.37  Aligned_cols=459  Identities=27%  Similarity=0.454  Sum_probs=352.2

Q ss_pred             HHHHHHHHHhhCCCCCCCCCCCCCCCcccccccccCCCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhc
Q 010334           24 LFLLMLIRYWKNSNGQGKQPPGPKPLPILGNLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTN  103 (513)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~PgP~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~  103 (513)
                      +++.+...+....+.....+|||+++|++|++.++. .+++..+.+++++||++|++++++.++|+++||+.+++|+.++
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~   90 (482)
T PTZ00404         12 IFYIIHNAYKKYKKIHKNELKGPIPIPILGNLHQLG-NLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDN   90 (482)
T ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCCCeeccHhhhc-ccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhc
Confidence            333333333344456678899999999999998884 4688999999999999999999999999999999999999877


Q ss_pred             ccccCCCCCccchhhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHh--cCCCceehH
Q 010334          104 EIKFAQRPEVYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISS--NQGRPINLS  181 (513)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~--~~~~~~d~~  181 (513)
                      ...|..++.........+ + ..+++.+|+.|+++|+++ .+.|+..+++.+.+.+.+.++.+++.+.+  +.++++|+.
T Consensus        91 ~~~~~~r~~~~~~~~~~~-~-~~l~~~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~  167 (482)
T PTZ00404         91 FDNFSDRPKIPSIKHGTF-Y-HGIVTSSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPR  167 (482)
T ss_pred             chhhcCCCCcceeeeecc-C-CceeccChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHH
Confidence            666666554332221111 2 345667899999999996 89999999999999999999999998864  346679999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCch--------hhHHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHH
Q 010334          182 EKIFTMTNDIIARAAFGRKNSDQ--------HNFTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKI  253 (513)
Q Consensus       182 ~~~~~~~~dvi~~~~fG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~  253 (513)
                      +++..+++|+++.++||.+.+..        ..+...+...+...........++.+...  +........+..+.+.++
T Consensus       168 ~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  245 (482)
T PTZ00404        168 YYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL--YYQYLEHTDKNFKKIKKF  245 (482)
T ss_pred             HHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh--hHHHHHHHHHHHHHHHHH
Confidence            99999999999999999876532        12233333333322211111112211110  111112223445555555


Q ss_pred             HHHHHHHHHHHHHhhhccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCc
Q 010334          254 LEDIVAEHKLKRKAAANNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNP  333 (513)
Q Consensus       254 ~~~~i~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p  333 (513)
                      +.+.++++++...       .....|+++.|++...+.    .....+++++++.++++||+|||+++++|++++|++||
T Consensus       246 ~~~~i~~~~~~~~-------~~~~~dll~~ll~~~~~~----~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P  314 (482)
T PTZ00404        246 IKEKYHEHLKTID-------PEVPRDLLDLLIKEYGTN----TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYP  314 (482)
T ss_pred             HHHHHHHHHHccC-------CCCcccHHHHHHHHhccC----CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCc
Confidence            5555544332210       123468999999754221    11233458899999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHhcCCCccchhhccCCchHHHHHHhhccCCCCCcCc-ccccccccee-eCcccCCCCEEEEecccccc
Q 010334          334 RVMKKAQEEVRQACKGKSKIQEADIQKLDYLKLVIKETFRLHAPGPFT-PREAREKCEI-RGYTIPAKAKILINLHAIGR  411 (513)
Q Consensus       334 ~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~  411 (513)
                      ++|+|+++||+++++++..++++++++||||+|||+||||++|+++.. +|.+.+|+++ +||.|||||.|.++.+++|+
T Consensus       315 ~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hr  394 (482)
T PTZ00404        315 EIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGR  394 (482)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhC
Confidence            999999999999998766789999999999999999999999999974 9999999999 99999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcccCCCCCccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccc
Q 010334          412 DPTVWKDPECFRPERFEGSSTDFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENF  491 (513)
Q Consensus       412 d~~~~~~p~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  491 (513)
                      ||++||||++|+||||++..     ....|+|||+|+|+|+|++||++|++++++.|+++|++++.++++   .+.....
T Consensus       395 dp~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~  466 (482)
T PTZ00404        395 NEKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKK---IDETEEY  466 (482)
T ss_pred             CccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCC---CCccccc
Confidence            99999999999999998642     345789999999999999999999999999999999999865542   2223344


Q ss_pred             CccccccCCceEEeecc
Q 010334          492 GMTARRKENLQVIATTR  508 (513)
Q Consensus       492 ~~~~~~~~~~~~~~~~r  508 (513)
                      +++++ +++++|++++|
T Consensus       467 ~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        467 GLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             ceeec-CCCceeeeecC
Confidence            66666 45799999987


No 12 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.4e-76  Score=577.44  Aligned_cols=469  Identities=25%  Similarity=0.470  Sum_probs=362.1

Q ss_pred             CCCCCCCCCCCCCcccccccccC--CCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCcc
Q 010334           37 NGQGKQPPGPKPLPILGNLHQLA--DGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVY  114 (513)
Q Consensus        37 ~~~~~~~PgP~~~p~lG~~~~~~--~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~  114 (513)
                      .+..+.||||+++|++|++..+.  ..+++..+.+|+++||++|++++++.++++++||+++++++.++...|..++...
T Consensus        31 ~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~  110 (519)
T PLN00168         31 KKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA  110 (519)
T ss_pred             CCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc
Confidence            44557899999999999987663  2346788999999999999999999999999999999999988877787776543


Q ss_pred             chhhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHhc--CCCceehHHHHHHHHHHHH
Q 010334          115 AVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISSN--QGRPINLSEKIFTMTNDII  192 (513)
Q Consensus       115 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~dvi  192 (513)
                      .....+.......+..+|+.|+++||.+..+.|+.++++.+.+.+.+.++.+++.+.+.  .++++|+.+.+..++.+++
T Consensus       111 ~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii  190 (519)
T PLN00168        111 SSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLL  190 (519)
T ss_pred             chhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence            32222221122223467999999998656899999999999999999999999999742  2356899999999999999


Q ss_pred             HHHHhcCCCCchh--hHHHHHHHHHHhc-ccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010334          193 ARAAFGRKNSDQH--NFTVLLEEIMKIG-AGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAAA  269 (513)
Q Consensus       193 ~~~~fG~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  269 (513)
                      +.++||.++++..  .+........... ....+...+|.+.... .....++..+..+.+.+++.+.++++++......
T Consensus       191 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  269 (519)
T PLN00168        191 VLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHL-FRGRLQKALALRRRQKELFVPLIDARREYKNHLG  269 (519)
T ss_pred             HHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            9999999876421  1222222221111 1122233445432110 1112334456777888888888887765432100


Q ss_pred             ccC--c---ccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHH
Q 010334          270 NNN--V---KLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVR  344 (513)
Q Consensus       270 ~~~--~---~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~  344 (513)
                      ...  .   .....|+++.|++..... ..+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+
T Consensus       270 ~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~  348 (519)
T PLN00168        270 QGGEPPKKETTFEHSYVDTLLDIRLPE-DGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIK  348 (519)
T ss_pred             ccCccccccccccccHHHHHHhhhccc-cccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            000  0   011458999999754321 1223599999999999999999999999999999999999999999999999


Q ss_pred             HHhcCC-CccchhhccCCchHHHHHHhhccCCCCCcCc-cccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCC
Q 010334          345 QACKGK-SKIQEADIQKLDYLKLVIKETFRLHAPGPFT-PREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECF  422 (513)
Q Consensus       345 ~~~~~~-~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  422 (513)
                      ++++++ ..++++++.+||||+|||+||||++|+++.. +|.+.+|++++||.|||||.|.++++.+|+||++||||++|
T Consensus       349 ~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F  428 (519)
T PLN00168        349 AKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEF  428 (519)
T ss_pred             HHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCcccc
Confidence            998753 5689999999999999999999999999876 89999999999999999999999999999999999999999


Q ss_pred             CCCcccCCCCC-----ccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccc
Q 010334          423 RPERFEGSSTD-----FKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARR  497 (513)
Q Consensus       423 ~P~R~~~~~~~-----~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  497 (513)
                      +||||++++..     .......|+|||+|+|+|+|++||++|++++++.||++|++++.++..   ++.....+++..+
T Consensus       429 ~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~~  505 (519)
T PLN00168        429 VPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDE---VDFAEKREFTTVM  505 (519)
T ss_pred             CcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCc---CChhhhceeEEee
Confidence            99999964321     112345799999999999999999999999999999999999876532   2333334556677


Q ss_pred             cCCceEEeeccCC
Q 010334          498 KENLQVIATTRIP  510 (513)
Q Consensus       498 ~~~~~~~~~~r~~  510 (513)
                      ++++.+.+++|++
T Consensus       506 ~~~~~~~~~~R~~  518 (519)
T PLN00168        506 AKPLRARLVPRRT  518 (519)
T ss_pred             cCCcEEEEEeccC
Confidence            7889999999975


No 13 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.1e-75  Score=572.80  Aligned_cols=463  Identities=32%  Similarity=0.535  Sum_probs=350.0

Q ss_pred             CCCCCCCCCCCCCcccccccccCCCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccch
Q 010334           37 NGQGKQPPGPKPLPILGNLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAV  116 (513)
Q Consensus        37 ~~~~~~~PgP~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~~  116 (513)
                      .++.+.||||++.|++|++.++..+..+..+.+|+++||++|++++++.++|+|+||+.+++++.++...|.+++.....
T Consensus        26 ~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~  105 (503)
T PLN02394         26 GKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVF  105 (503)
T ss_pred             cCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchH
Confidence            35567899999999999998885444578899999999999999999999999999999999998776667666543332


Q ss_pred             hhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHhc---CCCceehHHHHHHHHHHHHH
Q 010334          117 EIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISSN---QGRPINLSEKIFTMTNDIIA  193 (513)
Q Consensus       117 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~---~~~~~d~~~~~~~~~~dvi~  193 (513)
                      ......+.+.+++.+|+.|+++|+.+..+.|+.++++.+.+.+.++++.+++.+...   .++.+|+.+++..+++|+++
T Consensus       106 ~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~  185 (503)
T PLN02394        106 DIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMY  185 (503)
T ss_pred             hHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHH
Confidence            222212345677788999999999975689999999999999999999999988742   24569999999999999999


Q ss_pred             HHHhcCCCCchh-hHHHHHHHH----HHhccc--ccccccccccccccccccchHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 010334          194 RAAFGRKNSDQH-NFTVLLEEI----MKIGAG--FAIADLYPSLTFLRPLTGVKPALMRIQKKMDK-ILEDIVAEHKLKR  265 (513)
Q Consensus       194 ~~~fG~~~~~~~-~~~~~~~~~----~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~  265 (513)
                      +++||.+++... .....+...    ......  ..+...+|++...  +....+..........+ +....++++++..
T Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (503)
T PLN02394        186 RMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF--LRGYLKICQDVKERRLALFKDYFVDERKKLM  263 (503)
T ss_pred             HHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999875422 111111111    111111  1112223322110  11111111111122222 2233445443322


Q ss_pred             HhhhccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHH
Q 010334          266 KAAANNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQ  345 (513)
Q Consensus       266 ~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~  345 (513)
                      .....+  .....|+++.|++..+.     ..++++++..++.++++||+||||++++|++|+|++||++|+||++||++
T Consensus       264 ~~~~~~--~~~~~d~l~~ll~~~~~-----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~  336 (503)
T PLN02394        264 SAKGMD--KEGLKCAIDHILEAQKK-----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDT  336 (503)
T ss_pred             hhccCC--cchhhhHHHHHHhcccc-----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence            110001  12346889999975432     24899999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCccchhhccCCchHHHHHHhhccCCCCCcCc-cccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCCCC
Q 010334          346 ACKGKSKIQEADIQKLDYLKLVIKETFRLHAPGPFT-PREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECFRP  424 (513)
Q Consensus       346 ~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  424 (513)
                      +++.+..++++++.+||||+|||+|+||++|++|.. +|.+.+|++++||.||+||.|.++++.+|+||++|+||++|+|
T Consensus       337 v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~P  416 (503)
T PLN02394        337 VLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRP  416 (503)
T ss_pred             HhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCc
Confidence            997666789999999999999999999999999987 7999999999999999999999999999999999999999999


Q ss_pred             CcccCCCCC--ccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccC-ccccccCCc
Q 010334          425 ERFEGSSTD--FKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFG-MTARRKENL  501 (513)
Q Consensus       425 ~R~~~~~~~--~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  501 (513)
                      |||++++..  .......|+|||+|+|+|+|++||++|++++++.|+++|++++.++.+  .++....++ +....+.++
T Consensus       417 eRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  494 (503)
T PLN02394        417 ERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS--KIDVSEKGGQFSLHIAKHS  494 (503)
T ss_pred             cccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC--cCccccccCceeeccCCCc
Confidence            999965431  122356799999999999999999999999999999999999876642  244444443 444345589


Q ss_pred             eEEeeccCC
Q 010334          502 QVIATTRIP  510 (513)
Q Consensus       502 ~~~~~~r~~  510 (513)
                      .+++.+|..
T Consensus       495 ~~~~~~r~~  503 (503)
T PLN02394        495 TVVFKPRSA  503 (503)
T ss_pred             eEEeecCCC
Confidence            999999963


No 14 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=7.5e-77  Score=571.40  Aligned_cols=455  Identities=27%  Similarity=0.479  Sum_probs=356.2

Q ss_pred             CCCCCCCCCCCcccccccccCCC--CChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccch
Q 010334           39 QGKQPPGPKPLPILGNLHQLADG--QPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAV  116 (513)
Q Consensus        39 ~~~~~PgP~~~p~lG~~~~~~~~--~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~~  116 (513)
                      ....+|||.++|++|++.++...  +...++.++..+||++|+.+++|.++++++||+.+++|+.++.....+.+.+...
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            56789999999999999988543  5667889999999999999999999999999999999996554444433333312


Q ss_pred             hhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHh-cCCCceehHHHHHHHHHHHHHHH
Q 010334          117 EIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISS-NQGRPINLSEKIFTMTNDIIARA  195 (513)
Q Consensus       117 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~-~~~~~~d~~~~~~~~~~dvi~~~  195 (513)
                      .. .+.|.+++++. |+.|+++||++ .+.|+...++.+...+.+.+..+...+.. ..++.+|+.+.+.++++|+|+.+
T Consensus       113 ~~-~~lG~gll~~~-g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~  189 (497)
T KOG0157|consen  113 LK-PWLGDGLLFSD-GEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKT  189 (497)
T ss_pred             HH-HHhcCccccCC-chHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHH
Confidence            11 22344555554 99999999995 89999999999999888888887776664 23334999999999999999999


Q ss_pred             HhcCCC-C-chhhHHHHHHHHHHhccccccccccc-ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 010334          196 AFGRKN-S-DQHNFTVLLEEIMKIGAGFAIADLYP-SLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAAANNN  272 (513)
Q Consensus       196 ~fG~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  272 (513)
                      +||... + ...+......++.............| +..++..+. ..++.+++.+.+.+++++.|++|++.........
T Consensus       190 ~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~  268 (497)
T KOG0157|consen  190 AMGPESLDAEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGLK-SERKLKKARKILHDFLEKIIRERREELEKEGSGE  268 (497)
T ss_pred             hcCCccccccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence            999322 2 22223333344433333222333344 222222222 5677888999999999999999887654321111


Q ss_pred             cccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcCCCc
Q 010334          273 VKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACKGKSK  352 (513)
Q Consensus       273 ~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~  352 (513)
                       .....|+++.+....+      ..+++++|.+++.+|++||+||||++++|++++|+.||++|+|+++|++++++++..
T Consensus       269 -~~~~~d~L~~~~~~~~------~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~  341 (497)
T KOG0157|consen  269 -EKKRLDFLDTLLLEED------KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDD  341 (497)
T ss_pred             -cchhhhHHHHHHHhcc------CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCC
Confidence             1345667775222111      369999999999999999999999999999999999999999999999999975432


Q ss_pred             -cchhhccCCchHHHHHHhhccCCCCCcCcccccccccee-eCcccCCCCEEEEeccccccCCCCCC-CCCCCCCCcccC
Q 010334          353 -IQEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEI-RGYTIPAKAKILINLHAIGRDPTVWK-DPECFRPERFEG  429 (513)
Q Consensus       353 -~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~F~P~R~~~  429 (513)
                       .+..+.++|+||++||+||||||||+|...|++.+|+++ +||.||||+.|+++++.+|||+++|+ ||++||||||++
T Consensus       342 ~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~  421 (497)
T KOG0157|consen  342 KWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLD  421 (497)
T ss_pred             CCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCC
Confidence             233333479999999999999999999999999999999 58999999999999999999999996 999999999997


Q ss_pred             CCCCccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceEEeeccC
Q 010334          430 SSTDFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQVIATTRI  509 (513)
Q Consensus       430 ~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  509 (513)
                      +......+++.|+|||+|+|+|+||+||++|+|+++++||++|++++..+..     .......++++++|++|++++|.
T Consensus       422 ~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  422 GEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELTLRPKNGLKVKLRPRG  496 (497)
T ss_pred             CCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEEEEecCCeEEEEEeCC
Confidence            6543344578999999999999999999999999999999999999876642     22345788999999999999996


No 15 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=6.7e-75  Score=560.19  Aligned_cols=448  Identities=26%  Similarity=0.484  Sum_probs=351.2

Q ss_pred             CCCCCCCcccccccccCCCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccchhhcccC
Q 010334           43 PPGPKPLPILGNLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVEIMSYD  122 (513)
Q Consensus        43 ~PgP~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~  122 (513)
                      ||||+++|++||++++...+++..+.+|+++||++|++++++.++++|+||+.+++|+.++...|..++...........
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            68999999999999986556889999999999999999999999999999999999999888788777544333222211


Q ss_pred             CceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHh----cCCCceehHHHHHHHHHHHHHHHHhc
Q 010334          123 HSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISS----NQGRPINLSEKIFTMTNDIIARAAFG  198 (513)
Q Consensus       123 ~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~----~~~~~~d~~~~~~~~~~dvi~~~~fG  198 (513)
                      +..+.+..+|+.|+++|+.+..++|+...++.+.+.+.+.++.+++.+..    ..++++|+.+.+..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            22234445689999999887778898888888888888888777777652    24578999999999999999999999


Q ss_pred             CCCCchh--h----------HHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010334          199 RKNSDQH--N----------FTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRK  266 (513)
Q Consensus       199 ~~~~~~~--~----------~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  266 (513)
                      .+.+...  +          +...+..+........+...+|.+.++. .........+......++++..++++++...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  239 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIP-NKSFETRVQTTEFRRTAVMKALIKQQKKRIA  239 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcC-chhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            8765321  1          1222233333222222334555443321 1111222222333445666677766654321


Q ss_pred             hhhccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHH
Q 010334          267 AAANNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQA  346 (513)
Q Consensus       267 ~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~  346 (513)
                      .   .   ....|+++.+++..       ..++++++.+++.++++||+|||+++|+|++++|++||++|+++++||+++
T Consensus       240 ~---~---~~~~d~l~~ll~~~-------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~  306 (466)
T PLN02655        240 R---G---EERDCYLDFLLSEA-------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREV  306 (466)
T ss_pred             C---C---CCcccHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            1   1   23458999999743       148999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCccchhhccCCchHHHHHHhhccCCCCCcCc-cccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCCCCC
Q 010334          347 CKGKSKIQEADIQKLDYLKLVIKETFRLHAPGPFT-PREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECFRPE  425 (513)
Q Consensus       347 ~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~  425 (513)
                      ++++. ++++++.++|||+|||+||||++|+++.. +|++.+|++++||.|||||.|+++.+.+|+||++|+||++|+||
T Consensus       307 ~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~Pe  385 (466)
T PLN02655        307 CGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPE  385 (466)
T ss_pred             hCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCcc
Confidence            87644 89999999999999999999999999987 79999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceEEe
Q 010334          426 RFEGSSTDFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQVIA  505 (513)
Q Consensus       426 R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (513)
                      ||++++... .....++|||+|+|+|||++||+.|+++++++||++|++++.++.. +.   ....+++..+++++.+.+
T Consensus       386 R~~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~  460 (466)
T PLN02655        386 RFLGEKYES-ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EK---EDTVQLTTQKLHPLHAHL  460 (466)
T ss_pred             ccCCCCccc-CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cc---cchhheeEeecCCcEEEE
Confidence            999754321 2346789999999999999999999999999999999999876532 11   223567778999999999


Q ss_pred             eccCC
Q 010334          506 TTRIP  510 (513)
Q Consensus       506 ~~r~~  510 (513)
                      ++|-.
T Consensus       461 ~~r~~  465 (466)
T PLN02655        461 KPRGS  465 (466)
T ss_pred             eecCC
Confidence            98853


No 16 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=1.1e-74  Score=562.88  Aligned_cols=437  Identities=22%  Similarity=0.350  Sum_probs=335.6

Q ss_pred             CCCCCCCCCCCCCcccccccccC----CCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCC
Q 010334           37 NGQGKQPPGPKPLPILGNLHQLA----DGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPE  112 (513)
Q Consensus        37 ~~~~~~~PgP~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~  112 (513)
                      .++.+.||||+++|++||++.+.    .+.++.++.+++++||++|++++++.++|+++||+++++++.+++..|..+..
T Consensus        34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            34556799999999999986542    13466788999999999999999999999999999999999877665643321


Q ss_pred             ccchhhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHh-hHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHH
Q 010334          113 VYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQS-FRSIREDEVWGLVEFISSNQGRPINLSEKIFTMTNDI  191 (513)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~dv  191 (513)
                      .......   +...++..+|+.|+++|+++ .+.|+..+++. +.+.+.+.+..+++.+..  ++++|+.+.+..+++|+
T Consensus       114 ~~~~~~~---g~~~~~~~~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~~~~v  187 (490)
T PLN02500        114 RSIGGIL---GKWSMLVLVGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWKE--NSTFSAQDEAKKFTFNL  187 (490)
T ss_pred             hHHHHHh---CcccccccCCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhCC--CCCEEehHHHHHHHHHH
Confidence            1111111   22234455899999999996 68899998886 567777777777776653  45799999999999999


Q ss_pred             HHHHHhcCCCCch--hhHHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010334          192 IARAAFGRKNSDQ--HNFTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAAA  269 (513)
Q Consensus       192 i~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  269 (513)
                      +++++||.+.+..  ..+...+.........  ....+|..        ..++..+..+.+.+++.+.++++++....  
T Consensus       188 i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--  255 (490)
T PLN02500        188 MAKHIMSMDPGEEETEQLKKEYVTFMKGVVS--APLNFPGT--------AYRKALKSRATILKFIERKMEERIEKLKE--  255 (490)
T ss_pred             HHHHHhCCCCCchHHHHHHHHHHHHHhhhhc--chhcCCCc--------ccHHHHHHHHHHHHHHHHHHHHHHHhhhc--
Confidence            9999999876432  2222222222221100  00011111        12344556777888888888877654322  


Q ss_pred             ccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhc-
Q 010334          270 NNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACK-  348 (513)
Q Consensus       270 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~-  348 (513)
                       +.......|+++.+++.        ..++++++.+++.++++||+|||+++++|++++|++|||+|+|+++|++++++ 
T Consensus       256 -~~~~~~~~d~l~~ll~~--------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~  326 (490)
T PLN02500        256 -EDESVEEDDLLGWVLKH--------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARA  326 (490)
T ss_pred             -ccCCCCcchHHHHHHhc--------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc
Confidence             11112346899988862        14899999999999999999999999999999999999999999999999863 


Q ss_pred             ----CCCccchhhccCCchHHHHHHhhccCCCCCcCccccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCCCC
Q 010334          349 ----GKSKIQEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECFRP  424 (513)
Q Consensus       349 ----~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  424 (513)
                          ++..++++++.+||||+|||+||||++|+++..+|.+++|++++||.|||||.|.++.+.+||||++|+||++|+|
T Consensus       327 ~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~P  406 (490)
T PLN02500        327 KKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNP  406 (490)
T ss_pred             cccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccCh
Confidence                2345899999999999999999999999999889999999999999999999999999999999999999999999


Q ss_pred             CcccCCCCCcc------CCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCcccccc
Q 010334          425 ERFEGSSTDFK------GNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRK  498 (513)
Q Consensus       425 ~R~~~~~~~~~------~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (513)
                      |||++++....      ..+..|+|||+|+|+|+|++||++|++++++.||++|++++.++...    ..  ... ..+.
T Consensus       407 eRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~----~~--~~~-~~~~  479 (490)
T PLN02500        407 WRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA----FA--FPF-VDFP  479 (490)
T ss_pred             hhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc----ee--ccc-ccCC
Confidence            99996542111      13567999999999999999999999999999999999998765421    11  112 2445


Q ss_pred             CCceEEeec
Q 010334          499 ENLQVIATT  507 (513)
Q Consensus       499 ~~~~~~~~~  507 (513)
                      +++.|++++
T Consensus       480 ~~l~~~~~~  488 (490)
T PLN02500        480 KGLPIRVRR  488 (490)
T ss_pred             CCceEEEEe
Confidence            689998865


No 17 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=9.9e-74  Score=555.49  Aligned_cols=463  Identities=26%  Similarity=0.444  Sum_probs=346.6

Q ss_pred             CCCCCCCCCCCCcccccccccCCCCCh-HHHHHHHHhc-CCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccc
Q 010334           38 GQGKQPPGPKPLPILGNLHQLADGQPH-HVMTKLCRKY-GPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYA  115 (513)
Q Consensus        38 ~~~~~~PgP~~~p~lG~~~~~~~~~~~-~~~~~~~~ky-G~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~  115 (513)
                      ...+.||||+++|++||++++..+++. .++.++.++| |+||++++++.++|+|+||+.+++++.++...|.+++....
T Consensus        37 ~~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~  116 (534)
T PLN03018         37 RSRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSI  116 (534)
T ss_pred             CCCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchh
Confidence            344579999999999999987433332 3566667766 79999999999999999999999999988877888765444


Q ss_pred             hhhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHh--cCCCceehHHHHHHHHHHHHH
Q 010334          116 VEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISS--NQGRPINLSEKIFTMTNDIIA  193 (513)
Q Consensus       116 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~--~~~~~~d~~~~~~~~~~dvi~  193 (513)
                      ....+..+.++.+..+|+.|+++|+++....++....+.+.+....++..+++.+.+  ..++++|+.+++..+++|+++
T Consensus       117 ~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  196 (534)
T PLN03018        117 METIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTM  196 (534)
T ss_pred             hhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHH
Confidence            333322223466666799999999997444455555666666777778888888874  345679999999999999999


Q ss_pred             HHHhcCCCCc-------hhhHHH----HHHHHHHhccc---cccccccc-ccccccccccchHHHHHHHHHHHHHHHHHH
Q 010334          194 RAAFGRKNSD-------QHNFTV----LLEEIMKIGAG---FAIADLYP-SLTFLRPLTGVKPALMRIQKKMDKILEDIV  258 (513)
Q Consensus       194 ~~~fG~~~~~-------~~~~~~----~~~~~~~~~~~---~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i  258 (513)
                      +++||.++..       ......    ...........   ....+.+| ++..+ .+.+...........+.+++...+
T Consensus       197 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i  275 (534)
T PLN03018        197 RMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGW-NIDGQEERAKVNVNLVRSYNNPII  275 (534)
T ss_pred             HHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhh-cccchHHHHHHHHHHHHHHHHHHH
Confidence            9999998632       111111    11111111111   11112222 21110 011122333444566777788888


Q ss_pred             HHHHHHHHhhhccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHH
Q 010334          259 AEHKLKRKAAANNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKK  338 (513)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~  338 (513)
                      +++++....   ........|+++.|++..+..+  ...++++++..++.++++||+|||+++++|++++|+.||++|+|
T Consensus       276 ~~~~~~~~~---~~~~~~~~d~l~~ll~~~~~~~--~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~k  350 (534)
T PLN03018        276 DERVELWRE---KGGKAAVEDWLDTFITLKDQNG--KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRK  350 (534)
T ss_pred             HHHHHHhhh---ccCCCCcccHHHHHHHhhcccC--CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHH
Confidence            776643211   1111124689999997543211  11489999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCccchhhccCCchHHHHHHhhccCCCCCcCc-cccccccceeeCcccCCCCEEEEeccccccCCCCCC
Q 010334          339 AQEEVRQACKGKSKIQEADIQKLDYLKLVIKETFRLHAPGPFT-PREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWK  417 (513)
Q Consensus       339 l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~  417 (513)
                      +++||+++++.+..++.+++.+||||+|||+|+||++|+++.. .|++.+|++++||.||||+.|.++.+.+|+||++|+
T Consensus       351 l~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~  430 (534)
T PLN03018        351 ALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWK  430 (534)
T ss_pred             HHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCC
Confidence            9999999998777789999999999999999999999999987 799999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccCCCCCc-----cCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccC
Q 010334          418 DPECFRPERFEGSSTDF-----KGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFG  492 (513)
Q Consensus       418 ~p~~F~P~R~~~~~~~~-----~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  492 (513)
                      ||++|+||||++++...     ......|+|||+|+|+|+|++||.+|++++++.|+++|++++.++..  .++.....+
T Consensus       431 ~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~  508 (534)
T PLN03018        431 DPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFG--PLSLEEDDA  508 (534)
T ss_pred             CccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCC--CCCcccccc
Confidence            99999999999654211     12346799999999999999999999999999999999999875531  233433334


Q ss_pred             ccccccCCceEEeeccC
Q 010334          493 MTARRKENLQVIATTRI  509 (513)
Q Consensus       493 ~~~~~~~~~~~~~~~r~  509 (513)
                      ++. .++++.|.+++|.
T Consensus       509 ~~~-~p~~~~v~~~~R~  524 (534)
T PLN03018        509 SLL-MAKPLLLSVEPRL  524 (534)
T ss_pred             cee-cCCCeEEEEEecc
Confidence            444 4469999999995


No 18 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.6e-73  Score=559.44  Aligned_cols=458  Identities=24%  Similarity=0.358  Sum_probs=347.0

Q ss_pred             CCCCCCCCCCCc----------------ccccccccCCCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHh
Q 010334           39 QGKQPPGPKPLP----------------ILGNLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKT  102 (513)
Q Consensus        39 ~~~~~PgP~~~p----------------~lG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~  102 (513)
                      .+.++|||+-..                .+||+..+..++++..+.++|++||+||++++++.++++|+||+.+++|+.+
T Consensus       113 ~~~~~pgp~laa~t~~ye~y~~~~~~~~~~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~  192 (633)
T PLN02738        113 AKLGPPGELLAFLFTWVEAGEGYPKIPEAKGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRD  192 (633)
T ss_pred             hhCCCCCchHHHHHcccccccccccCccccCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhh
Confidence            456888987211                2355555656678889999999999999999999999999999999999987


Q ss_pred             cccccCCCCCccchhhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHh--cCCCceeh
Q 010334          103 NEIKFAQRPEVYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISS--NQGRPINL  180 (513)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~--~~~~~~d~  180 (513)
                      +...|.+.+.......  ..+. .++..+|+.|+++|+.+ .+.|+..+++.+.+.+.+.++.+++.+..  ..++++|+
T Consensus       193 ~~~~f~k~~~~~~~~~--~~g~-~l~~~dge~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl  268 (633)
T PLN02738        193 NSKAYSKGILAEILEF--VMGK-GLIPADGEIWRVRRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEM  268 (633)
T ss_pred             CcccCCCcchHHHHhh--ccCC-ceecCCcHHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeH
Confidence            6655665432211111  1123 34567899999999996 89999999999999999999999999974  35678999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCc---hhhHHHHHHHHHHhcccccccccccccc-cccccccchHHHHHHHHHHHHHHHH
Q 010334          181 SEKIFTMTNDIIARAAFGRKNSD---QHNFTVLLEEIMKIGAGFAIADLYPSLT-FLRPLTGVKPALMRIQKKMDKILED  256 (513)
Q Consensus       181 ~~~~~~~~~dvi~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~l~-~~~~~~~~~~~~~~~~~~~~~~~~~  256 (513)
                      .+.+..+++|+|+.++||.+++.   .+++...+..............+.++.. .+..+....+...+..+.+.....+
T Consensus       269 ~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~  348 (633)
T PLN02738        269 ESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDD  348 (633)
T ss_pred             HHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998763   2233333333332211111111111111 1111111122333444555555555


Q ss_pred             HHHHHHHHHHhhhc----cCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhC
Q 010334          257 IVAEHKLKRKAAAN----NNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKN  332 (513)
Q Consensus       257 ~i~~~~~~~~~~~~----~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~  332 (513)
                      .++..++.......    ......+.|+++.|++..       ..++++++.++++++++||+|||+.+|+|++++|++|
T Consensus       349 li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~-------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~  421 (633)
T PLN02738        349 LIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG-------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKE  421 (633)
T ss_pred             HHHHHHHHHhhhcccchhcccccccchHHHHHHHcC-------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhC
Confidence            55544332111100    000123457888888632       2489999999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHHHhcCCCccchhhccCCchHHHHHHhhccCCCCCcCccccccccceeeCcccCCCCEEEEeccccccC
Q 010334          333 PRVMKKAQEEVRQACKGKSKIQEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEIRGYTIPAKAKILINLHAIGRD  412 (513)
Q Consensus       333 p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d  412 (513)
                      |++|+|||+|+++++++ ..++++++++||||+|||+|+|||+|+++...|++.+|.+++||.|||||.|.++.+.+|+|
T Consensus       422 Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrd  500 (633)
T PLN02738        422 PSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRS  500 (633)
T ss_pred             HHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCC
Confidence            99999999999999874 56899999999999999999999999999889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcccCCCC--CccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcc
Q 010334          413 PTVWKDPECFRPERFEGSST--DFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSEN  490 (513)
Q Consensus       413 ~~~~~~p~~F~P~R~~~~~~--~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  490 (513)
                      |++||||++|+||||+.+..  ........|+|||.|+|+|+|++||++|++++++.|+++|++++.++.+  ++..  .
T Consensus       501 p~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~--~~~~--~  576 (633)
T PLN02738        501 PKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP--PVKM--T  576 (633)
T ss_pred             ccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC--Cccc--c
Confidence            99999999999999984321  1123456799999999999999999999999999999999999976542  2222  2


Q ss_pred             cCccccccCCceEEeeccCCCC
Q 010334          491 FGMTARRKENLQVIATTRIPFE  512 (513)
Q Consensus       491 ~~~~~~~~~~~~~~~~~r~~~~  512 (513)
                      .+++..++++++|++++|..++
T Consensus       577 ~~~~~~p~~~l~v~l~~R~~~~  598 (633)
T PLN02738        577 TGATIHTTEGLKMTVTRRTKPP  598 (633)
T ss_pred             cceEEeeCCCcEEEEEECCCCC
Confidence            3566788899999999998875


No 19 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.3e-73  Score=552.98  Aligned_cols=449  Identities=20%  Similarity=0.334  Sum_probs=337.5

Q ss_pred             CCCCCCCCCcccccccccCCC--CChHHHHHHHHhcCCcEE---EecCCccEEEEcCHHHHHHHHHhcccccCCCCCccc
Q 010334           41 KQPPGPKPLPILGNLHQLADG--QPHHVMTKLCRKYGPVMK---LKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYA  115 (513)
Q Consensus        41 ~~~PgP~~~p~lG~~~~~~~~--~~~~~~~~~~~kyG~v~~---~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~  115 (513)
                      ++.|||+++|++||+..+..+  ..++++.+...+||..++   .++++.++++|+||+.+++|+.++...|.+.+....
T Consensus        31 ~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~  110 (500)
T PLN02169         31 HGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKK  110 (500)
T ss_pred             CCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHH
Confidence            478999999999999776432  233445555556887665   677899999999999999999887666666532221


Q ss_pred             hhhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhh--HHHHHHHHHHHHHHHHh--cCCCceehHHHHHHHHHHH
Q 010334          116 VEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSF--RSIREDEVWGLVEFISS--NQGRPINLSEKIFTMTNDI  191 (513)
Q Consensus       116 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~--~~~~~~~~~~~~~~l~~--~~~~~~d~~~~~~~~~~dv  191 (513)
                        .....+.+ ++..+|+.|+++|+++ .+.|+...++.+  .+.+.+.++.+++.+.+  ..++++|+.+.+.++++|+
T Consensus       111 --~~~~~g~g-l~~~~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dv  186 (500)
T PLN02169        111 --IFDVLGEG-ILTVDFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDT  186 (500)
T ss_pred             --HHHhhcCc-ccccCcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHH
Confidence              11222334 5556799999999996 799999877643  36666777777777763  3457899999999999999


Q ss_pred             HHHHHhcCCCCch------hhHHHHHHHHHHhccccccccccccccc-c-ccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Q 010334          192 IARAAFGRKNSDQ------HNFTVLLEEIMKIGAGFAIADLYPSLTF-L-RPL-TGVKPALMRIQKKMDKILEDIVAEHK  262 (513)
Q Consensus       192 i~~~~fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~  262 (513)
                      |++++||.+.+..      ..+...........   ......|++.+ + .++ .+..+...+..+.+.+++.+.+++++
T Consensus       187 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~  263 (500)
T PLN02169        187 SSILMTGYDPMSLSIEMLEVEFGEAADIGEEAI---YYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRR  263 (500)
T ss_pred             HHhheeCCCccccCCCCCCCHHHHHHHHHHHHH---HhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999876431      12333333322211   11112232111 0 011 22345567788888999999998876


Q ss_pred             HHHHhhhccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHH
Q 010334          263 LKRKAAANNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEE  342 (513)
Q Consensus       263 ~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~E  342 (513)
                      +.....  .+.+....|+++.+++..+........++++++.+++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       264 ~~~~~~--~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~E  341 (500)
T PLN02169        264 KEEISR--AETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHE  341 (500)
T ss_pred             HHhhcc--ccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            542110  110112368999998753221111124788999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCccchhhccCCchHHHHHHhhccCCCCCcCcccccccccee-eCcccCCCCEEEEeccccccCCCCC-CCCC
Q 010334          343 VRQACKGKSKIQEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEI-RGYTIPAKAKILINLHAIGRDPTVW-KDPE  420 (513)
Q Consensus       343 i~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~  420 (513)
                      |++++      +++++.+||||+|||+||||++|++|...|.+.+|.++ +||.|||||.|.+++|.+||||++| +||+
T Consensus       342 i~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~  415 (500)
T PLN02169        342 INTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDAL  415 (500)
T ss_pred             HHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChh
Confidence            98864      67899999999999999999999999998888777665 9999999999999999999999999 8999


Q ss_pred             CCCCCcccCCCCCcc-CCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccC
Q 010334          421 CFRPERFEGSSTDFK-GNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKE  499 (513)
Q Consensus       421 ~F~P~R~~~~~~~~~-~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (513)
                      +|+||||++++.... ..+..|+|||+|+|+|+|++||++|++++++.||++|++++.++..   +  ....+++++|++
T Consensus       416 ~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~---~--~~~~~~~l~~~~  490 (500)
T PLN02169        416 DFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHK---I--EAIPSILLRMKH  490 (500)
T ss_pred             hcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCC---c--ccccceEEecCC
Confidence            999999997543321 2367899999999999999999999999999999999999875432   2  223467789999


Q ss_pred             CceEEeeccC
Q 010334          500 NLQVIATTRI  509 (513)
Q Consensus       500 ~~~~~~~~r~  509 (513)
                      ++.|++++|+
T Consensus       491 gl~l~l~~~~  500 (500)
T PLN02169        491 GLKVTVTKKI  500 (500)
T ss_pred             CEEEEEEeCC
Confidence            9999999985


No 20 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.5e-73  Score=512.08  Aligned_cols=450  Identities=24%  Similarity=0.358  Sum_probs=365.8

Q ss_pred             CCCCCCCCCCCccccccccc---CCCCChHHHHHHHHhcCCcEEEe-cCCccEEEEcCHHHHHHHHHhcccccCCCC-Cc
Q 010334           39 QGKQPPGPKPLPILGNLHQL---ADGQPHHVMTKLCRKYGPVMKLK-LGQLDAVIISSPEAAKEVLKTNEIKFAQRP-EV  113 (513)
Q Consensus        39 ~~~~~PgP~~~p~lG~~~~~---~~~~~~~~~~~~~~kyG~v~~~~-~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~-~~  113 (513)
                      +...+|||+++|++|.+..+   ...+.++.....+++||+||+.. +|+...|++.||++++.+|+..+. ++.++ ..
T Consensus        48 ~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~  126 (519)
T KOG0159|consen   48 PFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLI  126 (519)
T ss_pred             ChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCccccc
Confidence            45679999999999998843   23467888999999999999999 888889999999999999987653 34453 11


Q ss_pred             cch--hhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHh--c---CCCceehHHHHHH
Q 010334          114 YAV--EIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISS--N---QGRPINLSEKIFT  186 (513)
Q Consensus       114 ~~~--~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~--~---~~~~~d~~~~~~~  186 (513)
                      ...  ..-.+++..+++..+|+.|.+.|..+....+++++++.+.+.+...++++++.+..  +   ...+.|+.+.+.+
T Consensus       127 ~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~  206 (519)
T KOG0159|consen  127 EPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYR  206 (519)
T ss_pred             chhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence            111  11123345567888999999999999889999999999999999999999998884  2   2357899999999


Q ss_pred             HHHHHHHHHHhcCCCCch--------hhHHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHH
Q 010334          187 MTNDIIARAAFGRKNSDQ--------HNFTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIV  258 (513)
Q Consensus       187 ~~~dvi~~~~fG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i  258 (513)
                      ++++.|+.++||.+++..        +.+..++..++.....+   ...|.++.+ ..++.++++.++.+.+.+.....|
T Consensus       207 wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l---~~~p~l~r~-~~t~~wk~~~~~~D~i~~~~~~~I  282 (519)
T KOG0159|consen  207 WSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQL---MLMPSLWRY-FPTKVWKDFVRAWDQIFDVGDKYI  282 (519)
T ss_pred             HHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHH---HhcchHHHh-CCChHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999987641        24555666655544332   233433221 133456788888888888888888


Q ss_pred             HHHHHHHHhhhccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHH
Q 010334          259 AEHKLKRKAAANNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKK  338 (513)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~  338 (513)
                      +...++.+......  .+..+.+..++..        ..++.+++..+++.++.||.||||+|+.|+||+|++||++|++
T Consensus       283 d~~l~~l~~~~~~~--~~~~~~l~~~L~~--------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~  352 (519)
T KOG0159|consen  283 DNALEELEKQDSAG--SEYTGSLLELLLR--------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQR  352 (519)
T ss_pred             HHHHHHHHhccccc--cchhHHHHHHHHH--------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHH
Confidence            88877665421111  1222233333321        1488999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcC-CCccchhhccCCchHHHHHHhhccCCCCCcCccccccccceeeCcccCCCCEEEEeccccccCCCCCC
Q 010334          339 AQEEVRQACKG-KSKIQEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWK  417 (513)
Q Consensus       339 l~~Ei~~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~  417 (513)
                      |++|+.++... +..++.+++.++|||.||||||+||||.++...|...+|.+++||.|||||.|.++++.+.+||++|+
T Consensus       353 L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~  432 (519)
T KOG0159|consen  353 LREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFP  432 (519)
T ss_pred             HHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCC
Confidence            99999999987 57899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccCCCCCccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccc
Q 010334          418 DPECFRPERFEGSSTDFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARR  497 (513)
Q Consensus       418 ~p~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  497 (513)
                      +|++|+||||++++. ...+++.++|||.|+|+|+|++||++|+.++|++|+++|+++..++++     ....+.++..|
T Consensus       433 ~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~p-----v~~~~~~il~P  506 (519)
T KOG0159|consen  433 DPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEP-----VEYVYRFILVP  506 (519)
T ss_pred             CccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCC-----ccceeEEEEcC
Confidence            999999999998873 245788999999999999999999999999999999999999876532     33345677788


Q ss_pred             cCCceEEeeccC
Q 010334          498 KENLQVIATTRI  509 (513)
Q Consensus       498 ~~~~~~~~~~r~  509 (513)
                      ..++..++++|.
T Consensus       507 ~~~l~f~f~~r~  518 (519)
T KOG0159|consen  507 NRPLRFKFRPRN  518 (519)
T ss_pred             CCCcceeeeeCC
Confidence            889999999885


No 21 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=8.8e-73  Score=544.99  Aligned_cols=431  Identities=20%  Similarity=0.301  Sum_probs=335.8

Q ss_pred             CCCCCCCCCCCCcccccccccCCCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccchh
Q 010334           38 GQGKQPPGPKPLPILGNLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVE  117 (513)
Q Consensus        38 ~~~~~~PgP~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~~~  117 (513)
                      .+.+.||||+++|++||++.+. +++..++.+++++||++|++++++.++++|+||+.+++++.++...+..........
T Consensus        28 ~r~~~ppgp~~~P~~G~~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  106 (463)
T PLN02774         28 SKKGLPPGTMGWPLFGETTEFL-KQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD  106 (463)
T ss_pred             CCCCCCCCCCCCCchhhHHHHH-HhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH
Confidence            4446788999999999998873 356778999999999999999999999999999999999987665553322111111


Q ss_pred             hcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHh-hHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHH
Q 010334          118 IMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQS-FRSIREDEVWGLVEFISSNQGRPINLSEKIFTMTNDIIARAA  196 (513)
Q Consensus       118 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~dvi~~~~  196 (513)
                      .  + +.+++++.+|+.|+++|+++ .+.|+...++. +.+.+.+.+.++++.+..  ++++|+.+.+..+++++++.++
T Consensus       107 ~--l-g~~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~  180 (463)
T PLN02774        107 I--L-GTCNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWDG--LKTIDIQEKTKEMALLSALKQI  180 (463)
T ss_pred             H--h-CccchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhCC--CCCEEeeHHHHHHHHHHHHHHH
Confidence            1  2 22345566899999999996 78899999886 788888888888887752  3579999999999999999999


Q ss_pred             hcCCCCchhhHHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcccc
Q 010334          197 FGRKNSDQHNFTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAAANNNVKLE  276 (513)
Q Consensus       197 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  276 (513)
                      ||.......  ......+........   .+|.  +++ . ....+..++.+.+.+++.+.++++++..         ..
T Consensus       181 ~g~~~~~~~--~~~~~~~~~~~~~~~---~~~~--~lp-~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~---------~~  242 (463)
T PLN02774        181 AGTLSKPIS--EEFKTEFFKLVLGTL---SLPI--DLP-G-TNYRSGVQARKNIVRMLRQLIQERRASG---------ET  242 (463)
T ss_pred             cCCCChHHH--HHHHHHHHHHhcccc---cCCc--CCC-C-hhhhHHHHHHHHHHHHHHHHHHHHHhcC---------CC
Confidence            998654321  112222222221110   1111  000 0 0123445567777778887777764321         23


Q ss_pred             cchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcC---CCcc
Q 010334          277 EEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACKG---KSKI  353 (513)
Q Consensus       277 ~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~---~~~~  353 (513)
                      .+|+++.+++...    .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.   +..+
T Consensus       243 ~~d~l~~ll~~~~----~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~  318 (463)
T PLN02774        243 HTDMLGYLMRKEG----NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPI  318 (463)
T ss_pred             cccHHHHHHhCcc----CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCC
Confidence            4689999887321    12358999999999999999999999999999999999999999999999999853   3468


Q ss_pred             chhhccCCchHHHHHHhhccCCCCCcCccccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCCCCCcccCCCCC
Q 010334          354 QEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECFRPERFEGSSTD  433 (513)
Q Consensus       354 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~  433 (513)
                      ++++++++|||+|||+|+||++|+++...|.+.+|++++||.||||+.|+++.+.+|+||++|+||++|+||||++++..
T Consensus       319 ~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~  398 (463)
T PLN02774        319 DWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE  398 (463)
T ss_pred             CHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC
Confidence            99999999999999999999999999889999999999999999999999999999999999999999999999965421


Q ss_pred             ccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceEEeec
Q 010334          434 FKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQVIATT  507 (513)
Q Consensus       434 ~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (513)
                         ....|+|||+|+|.|||++||++|++++++.||++|++++.++...  ..     ..+..|++++.|++++
T Consensus       399 ---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~--~~-----~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        399 ---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKL--MK-----FPRVEAPNGLHIRVSP  462 (463)
T ss_pred             ---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcc--cc-----CCCCCCCCCceEEeee
Confidence               1235899999999999999999999999999999999999765321  11     1123478999999874


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=5.4e-73  Score=554.62  Aligned_cols=451  Identities=22%  Similarity=0.343  Sum_probs=337.0

Q ss_pred             CCCCCCCCcccccccccCCCCChHHHHHHHHhc---CCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccchhh
Q 010334           42 QPPGPKPLPILGNLHQLADGQPHHVMTKLCRKY---GPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVEI  118 (513)
Q Consensus        42 ~~PgP~~~p~lG~~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~~~~  118 (513)
                      .+|||+++|++||++++.. + +..+.+|.++|   |++|++++++.++++++||+.+++|+.++...|.+........ 
T Consensus        31 ~~pgp~~~p~~G~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~-  107 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLK-N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYM-  107 (516)
T ss_pred             ccCCCCCCCeecchHHHHh-c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHH-
Confidence            5799999999999876533 2 34456777777   8999999999999999999999999987644554432211110 


Q ss_pred             cccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHH-HHHHHHHHHHHHh--cCCCceehHHHHHHHHHHHHHHH
Q 010334          119 MSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIR-EDEVWGLVEFISS--NQGRPINLSEKIFTMTNDIIARA  195 (513)
Q Consensus       119 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~-~~~~~~~~~~l~~--~~~~~~d~~~~~~~~~~dvi~~~  195 (513)
                      ....+.+ +++.+|+.|+++|+++ .+.|+..+++.+.+.+ .+.++.+++.+..  ..++++|+.++++.+++|+|+.+
T Consensus       108 ~~~~g~~-l~~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~  185 (516)
T PLN03195        108 EVLLGDG-IFNVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKV  185 (516)
T ss_pred             HHHhcCe-eeccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHH
Confidence            0111233 5667899999999996 8889999999998875 5666777776652  34568999999999999999999


Q ss_pred             HhcCCCCch------hhHHHHHHHHHHhccccccccccccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010334          196 AFGRKNSDQ------HNFTVLLEEIMKIGAGFAIADLYPSLTFLRPL-TGVKPALMRIQKKMDKILEDIVAEHKLKRKAA  268 (513)
Q Consensus       196 ~fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (513)
                      +||.+++..      ..+...+........   .....|.+.....+ ....+...+..+.+.+++.+.++++++.....
T Consensus       186 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (516)
T PLN03195        186 GFGVEIGTLSPSLPENPFAQAFDTANIIVT---LRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEA  262 (516)
T ss_pred             HhCCCccccccCCCccHHHHHHHHHHHHHH---HHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999987532      123333333221110   00011211110001 11123344566777888888887776543210


Q ss_pred             hccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhc
Q 010334          269 ANNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACK  348 (513)
Q Consensus       269 ~~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~  348 (513)
                      . ........|+++.+++...+   .+..++++++.++++++++||+|||+++++|++|+|++||++|+||++|++++++
T Consensus       263 ~-~~~~~~~~d~l~~ll~~~~~---~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~  338 (516)
T PLN03195        263 R-KSGKKVKHDILSRFIELGED---PDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEK  338 (516)
T ss_pred             c-cccccccccHHHHHHhccCC---CCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhh
Confidence            0 00112356899999874321   1235899999999999999999999999999999999999999999999998764


Q ss_pred             C--------------------CCccchhhccCCchHHHHHHhhccCCCCCcCcccccccccee-eCcccCCCCEEEEecc
Q 010334          349 G--------------------KSKIQEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEI-RGYTIPAKAKILINLH  407 (513)
Q Consensus       349 ~--------------------~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~  407 (513)
                      +                    +..++++++.+||||+|||+||||++|+++...|.+.+|.++ +||.|||||.|.++.+
T Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~  418 (516)
T PLN03195        339 ERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPY  418 (516)
T ss_pred             cccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehH
Confidence            2                    235789999999999999999999999999988888887666 9999999999999999


Q ss_pred             ccccCCCCC-CCCCCCCCCcccCCCCCccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCC
Q 010334          408 AIGRDPTVW-KDPECFRPERFEGSSTDFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLD  486 (513)
Q Consensus       408 ~~~~d~~~~-~~p~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~  486 (513)
                      .+|+||++| +||++|+||||++++......+..|+|||+|+|+|+|++||++|++++++.|+++|++++.++.+   +.
T Consensus       419 ~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~  495 (516)
T PLN03195        419 SMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHP---VK  495 (516)
T ss_pred             hhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCc---ce
Confidence            999999999 99999999999964321122446799999999999999999999999999999999999865432   22


Q ss_pred             CCcccCccccccCCceEEeeccC
Q 010334          487 MSENFGMTARRKENLQVIATTRI  509 (513)
Q Consensus       487 ~~~~~~~~~~~~~~~~~~~~~r~  509 (513)
                      .  ....+..|++++.|++++|.
T Consensus       496 ~--~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        496 Y--RMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             e--eeeeEEecCCCEEEEEEeCC
Confidence            2  23445678999999999884


No 23 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=3.4e-72  Score=540.30  Aligned_cols=428  Identities=25%  Similarity=0.385  Sum_probs=341.8

Q ss_pred             CCCCCCCCCCCCCcccccccccCCCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccch
Q 010334           37 NGQGKQPPGPKPLPILGNLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAV  116 (513)
Q Consensus        37 ~~~~~~~PgP~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~~  116 (513)
                      ..+.+.||||+++|++|+++++..++++.++.+++++||++|++++++.++|+++||+++++++.++...|.  +.....
T Consensus        31 ~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~  108 (463)
T PLN02196         31 STKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPAS  108 (463)
T ss_pred             CCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchH
Confidence            446677899989999999988656678999999999999999999999999999999999999987765552  222211


Q ss_pred             hhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHH
Q 010334          117 EIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISSNQGRPINLSEKIFTMTNDIIARAA  196 (513)
Q Consensus       117 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~dvi~~~~  196 (513)
                      ..... +...++..+|+.|+++|+++ .+.|+.++++.+.+.+.+.+.++++.+.   ++++|+.++++.+++++++.++
T Consensus       109 ~~~~~-g~~~l~~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~---~~~v~~~~~~~~~~~~v~~~~~  183 (463)
T PLN02196        109 KERML-GKQAIFFHQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWE---GTQINTYQEMKTYTFNVALLSI  183 (463)
T ss_pred             HHHHc-CcccccccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCC---CCeEEeHHHHHHHHHHHHHHHH
Confidence            11122 23345667899999999996 7889999999999999999998888764   3579999999999999999999


Q ss_pred             hcCCCCch-hhHHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccc
Q 010334          197 FGRKNSDQ-HNFTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAAANNNVKL  275 (513)
Q Consensus       197 fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  275 (513)
                      ||.+.... ..+........   ..   ...+|+..   +. ...++..++.+.+.+++.+.++++++..         .
T Consensus       184 fG~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~---p~-~~~~~~~~a~~~~~~~~~~~i~~~~~~~---------~  244 (463)
T PLN02196        184 FGKDEVLYREDLKRCYYILE---KG---YNSMPINL---PG-TLFHKSMKARKELAQILAKILSKRRQNG---------S  244 (463)
T ss_pred             cCCCCchHHHHHHHHHHHHh---cc---hhcccccC---CC-ccchHHHHHHHHHHHHHHHHHHHHhhcC---------C
Confidence            99875332 22222111111   10   11122211   00 1124556677778888888777664321         2


Q ss_pred             ccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcC---CCc
Q 010334          276 EEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACKG---KSK  352 (513)
Q Consensus       276 ~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~---~~~  352 (513)
                      ...|+++.+++.    +   ..++++++.++++++++||+|||+++++|++++|++||++|+|+++|++++.+.   +..
T Consensus       245 ~~~d~l~~ll~~----~---~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~  317 (463)
T PLN02196        245 SHNDLLGSFMGD----K---EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGES  317 (463)
T ss_pred             CcccHHHHHHhc----C---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCC
Confidence            346888888752    1   258999999999999999999999999999999999999999999999988753   356


Q ss_pred             cchhhccCCchHHHHHHhhccCCCCCcCccccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCCCCCcccCCCC
Q 010334          353 IQEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECFRPERFEGSST  432 (513)
Q Consensus       353 ~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~  432 (513)
                      ++.++++++|||+|||+|+||++|+++...|.+.+|++++||.||||+.|.++.+.+|+||++|+||++|+||||+... 
T Consensus       318 ~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-  396 (463)
T PLN02196        318 LTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-  396 (463)
T ss_pred             CCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-
Confidence            8999999999999999999999999998899999999999999999999999999999999999999999999999632 


Q ss_pred             CccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceEEeecc
Q 010334          433 DFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQVIATTR  508 (513)
Q Consensus       433 ~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  508 (513)
                          .+..++|||+|+|.|+|+++|++|++++++.|+++|++++.+++.    +.  .+..+..|++++.|+++..
T Consensus       397 ----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~----~~--~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        397 ----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN----GI--QYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             ----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC----ce--EEcccccCCCCceEEEecC
Confidence                345799999999999999999999999999999999999875431    22  2343456899999998764


No 24 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.8e-72  Score=489.76  Aligned_cols=443  Identities=23%  Similarity=0.356  Sum_probs=355.1

Q ss_pred             CCCCCCC-CCcccccccccCCCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccchhhc
Q 010334           41 KQPPGPK-PLPILGNLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVEIM  119 (513)
Q Consensus        41 ~~~PgP~-~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~~~~~  119 (513)
                      ..||.-+ |+||+|+...+ ++++..+++++++|||+||++.++|+.+.++.||+....++......++...........
T Consensus        31 ~~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~  109 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTP  109 (486)
T ss_pred             CCCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhh
Confidence            4666664 69999999999 678999999999999999999999999999999999999997664333322111111122


Q ss_pred             ccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHH-HHhcCCCceehHHHHHHHHHHHHHHHHhc
Q 010334          120 SYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEF-ISSNQGRPINLSEKIFTMTNDIIARAAFG  198 (513)
Q Consensus       120 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~~d~~~~~~~~~~dvi~~~~fG  198 (513)
                      .+ +.+.+....+....++.+++ ...+...+++++.+.+.+++++.++. +.+ +|.+..+.++.+.+++.+.-.+.||
T Consensus       110 vF-g~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~-s~~~d~l~~~~~~ii~tAs~~ll~~  186 (486)
T KOG0684|consen  110 VF-GKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE-SGETDGLYTFCRLIIFTASRLLLGG  186 (486)
T ss_pred             hc-CCCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc-ccchhHhhhhhHHHhhhhHHHhhhh
Confidence            22 33455666677777787775 77889999999999999999988876 433 5666778888888888888888888


Q ss_pred             CCCCc-hhhHHHHHHHHHHhcccccccccccc-cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcccc
Q 010334          199 RKNSD-QHNFTVLLEEIMKIGAGFAIADLYPS-LTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAAANNNVKLE  276 (513)
Q Consensus       199 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  276 (513)
                      +.... +++....+.++.+....  +...||. ++.    . ..+...++++.+.+.+...+.++++..        +..
T Consensus       187 e~r~~~d~~~a~l~~dLd~~F~~--~d~~FP~~LP~----~-~~r~~~ra~~~i~k~f~~~i~~rr~s~--------s~~  251 (486)
T KOG0684|consen  187 EVRDQLDADVAKLYHDLDQGFQP--FDFLFPYNLPI----P-LLRRRDRARKKISKIFSKIILDRRASI--------SKW  251 (486)
T ss_pred             hhhhhhcchHHHHHHHHhccccc--hHhhcccCCCc----c-hhhhHHHHHHHHHHHHHHHHHHHHhcc--------ccc
Confidence            75544 33445555555443322  3344563 221    1 234455888888888888887776543        135


Q ss_pred             cchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcCCCc-cch
Q 010334          277 EEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACKGKSK-IQE  355 (513)
Q Consensus       277 ~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~-~~~  355 (513)
                      +.|+++.+++-. .   .+...+++|++..++.++|||++||++|.+|++++|++|||+++++++|+.++++.+.. +++
T Consensus       252 ~~dmlq~l~~~y-~---dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~  327 (486)
T KOG0684|consen  252 DNDMLQSLMEKY-K---DGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTY  327 (486)
T ss_pred             cHHHHHHHHHHh-h---cCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCH
Confidence            668888888722 2   23479999999999999999999999999999999999999999999999999987755 999


Q ss_pred             hhccCCchHHHHHHhhccCCCCCcCccccccccceeeC----cccCCCCEEEEeccccccCCCCCCCCCCCCCCcccCCC
Q 010334          356 ADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEIRG----YTIPAKAKILINLHAIGRDPTVWKDPECFRPERFEGSS  431 (513)
Q Consensus       356 ~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~  431 (513)
                      ++++++|+|++||+|||||+||.+...|.+.+|.++.+    |.||+|..|.++++.+|+||++||||+.|+|+||++++
T Consensus       328 d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~  407 (486)
T KOG0684|consen  328 DQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDN  407 (486)
T ss_pred             HHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCC
Confidence            99999999999999999999999999999999999966    99999999999999999999999999999999999776


Q ss_pred             CCcc----CCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceEEeec
Q 010334          432 TDFK----GNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQVIATT  507 (513)
Q Consensus       432 ~~~~----~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (513)
                      .+.+    .-.+.|+|||+|.|.|||+.||.+|+|+++..+|++||+++.++ +.+.++..+   +++.|.+++.|+.|.
T Consensus       408 ~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~s~---~v~~P~g~v~irYK~  483 (486)
T KOG0684|consen  408 GESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDYSR---MVMQPEGDVRIRYKR  483 (486)
T ss_pred             cccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCHHH---hhcCCCCCceEEEee
Confidence            5431    12356799999999999999999999999999999999999987 455666644   378899999999999


Q ss_pred             cCC
Q 010334          508 RIP  510 (513)
Q Consensus       508 r~~  510 (513)
                      |..
T Consensus       484 R~~  486 (486)
T KOG0684|consen  484 RPL  486 (486)
T ss_pred             cCC
Confidence            963


No 25 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=7.8e-73  Score=553.78  Aligned_cols=449  Identities=31%  Similarity=0.559  Sum_probs=351.7

Q ss_pred             CCCCCCCcccccccccCC-CCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccchhh--c
Q 010334           43 PPGPKPLPILGNLHQLAD-GQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVEI--M  119 (513)
Q Consensus        43 ~PgP~~~p~lG~~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~~~~--~  119 (513)
                      ||||+++|++||++++.. ++++.++.+++++||+||++++++.++++|+||+.+++|+..+...+..++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            799999999999999863 5788889999999999999999999999999999999999887655554432222221  1


Q ss_pred             ccCCceEEEccCChhHHHHHhhhhhhcCCHH-HHHhhHHHHHHHHHHHHHHHHhcCCC--ceehHHHHHHHHHHHHHHHH
Q 010334          120 SYDHSSIVFAPYGDYWREMRKISVLELLSNK-RVQSFRSIREDEVWGLVEFISSNQGR--PINLSEKIFTMTNDIIARAA  196 (513)
Q Consensus       120 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~-~l~~~~~~~~~~~~~~~~~l~~~~~~--~~d~~~~~~~~~~dvi~~~~  196 (513)
                      ...+. .++..+++.|+.+|+++ .+.|+.. .+ .+.+.+.+.++.+++.+....+.  ++|+.++++.+++|+++.++
T Consensus        81 ~~~~~-~l~~~~~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGGK-GLFFSDGERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTTT-SSTTSSHHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccccc-ccccccccccccccccc-cccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            12233 34556689999999996 6777777 66 89999999999999999864443  69999999999999999999


Q ss_pred             hcCCCCc-h-h---hHHHHHHHHHHhcccc--cccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010334          197 FGRKNSD-Q-H---NFTVLLEEIMKIGAGF--AIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAAA  269 (513)
Q Consensus       197 fG~~~~~-~-~---~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  269 (513)
                      ||.+++. . .   .+......+.......  .+...+|++.++  .....+...++.+.+.+++...++++++..... 
T Consensus       158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-  234 (463)
T PF00067_consen  158 FGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL--PTPLFRRFKRARDRLRKYIKEIIEERREELDDG-  234 (463)
T ss_dssp             HSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS-
T ss_pred             ccceeeeccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccc-
Confidence            9998652 1 1   2334444443322111  122334432221  122344555666778888888888877665431 


Q ss_pred             ccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcC
Q 010334          270 NNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACKG  349 (513)
Q Consensus       270 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~  349 (513)
                          .....|+++.+++.... ...+..++++++..++..+++||+|||+.+++|++++|++||++|++|++||+++.++
T Consensus       235 ----~~~~~d~l~~ll~~~~~-~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  309 (463)
T PF00067_consen  235 ----DESRRDLLDSLLQASSD-SDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGD  309 (463)
T ss_dssp             ----SSSCSSHHHHHHHHHHT-TTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTT
T ss_pred             ----ccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                23578999999988611 1111469999999999999999999999999999999999999999999999999977


Q ss_pred             CCccchhhccCCchHHHHHHhhccCCCCCc-CccccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCCCCCccc
Q 010334          350 KSKIQEADIQKLDYLKLVIKETFRLHAPGP-FTPREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECFRPERFE  428 (513)
Q Consensus       350 ~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~  428 (513)
                      +..++.+++.+||||+|||+||||++|+++ ..+|++++|++++||.|||||.|.++.+.+|+||++|+||++|+|+||+
T Consensus       310 ~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~  389 (463)
T PF00067_consen  310 GREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFL  389 (463)
T ss_dssp             SSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGB
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            678999999999999999999999999999 5699999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceEEe
Q 010334          429 GSSTDFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQVIA  505 (513)
Q Consensus       429 ~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (513)
                      +.+.........|+|||.|+|.|||++||+.|++++++.||++|++++.++....+   .........|+.++.|.+
T Consensus       390 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  390 DERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEP---QEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             TTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGE---EECSCSSSEEESSSEEEE
T ss_pred             ccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCC---ccccCceEeeCCCcEEeC
Confidence            88653234677899999999999999999999999999999999999976554222   112213345555666653


No 26 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=4.9e-71  Score=531.74  Aligned_cols=439  Identities=21%  Similarity=0.302  Sum_probs=340.6

Q ss_pred             CCCCCCCCCCCCCcccccccccC----CCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCC
Q 010334           37 NGQGKQPPGPKPLPILGNLHQLA----DGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPE  112 (513)
Q Consensus        37 ~~~~~~~PgP~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~  112 (513)
                      +++.+.||||.++|++||++++.    ..+++.++.+++++||+||++++++.+++|++||+++++++.++...|..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            45667889999999999998873    23688899999999999999999999999999999999999887766654422


Q ss_pred             ccchhhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHh-hHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHH
Q 010334          113 VYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQS-FRSIREDEVWGLVEFISSNQGRPINLSEKIFTMTNDI  191 (513)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~dv  191 (513)
                      ......  + +...++..+|+.|+++|+++ .+.|+..++.. +.+.+.+.+.+.++.+.  .++++|+.+.+..+++++
T Consensus        83 ~~~~~l--~-g~~~~~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v  156 (452)
T PLN03141         83 KSLTEL--M-GKSSILLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR--DDPPVLVQDETKKIAFEV  156 (452)
T ss_pred             hhHHHH--h-CcccccccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc--CCCCEEhHHHHHHHHHHH
Confidence            111112  1 23345666899999999996 67787777765 45666666666666553  356799999999999999


Q ss_pred             HHHHHhcCCCCch-hhHHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 010334          192 IARAAFGRKNSDQ-HNFTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAAAN  270 (513)
Q Consensus       192 i~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  270 (513)
                      ++.++||.+.+.. ..+...+..+.....      .+|..  + +.. ...+..++.+.+.+++...+++++....... 
T Consensus       157 i~~~~~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~--~-p~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~-  225 (452)
T PLN03141        157 LVKALISLEPGEEMEFLKKEFQEFIKGLM------SLPIK--L-PGT-RLYRSLQAKKRMVKLVKKIIEEKRRAMKNKE-  225 (452)
T ss_pred             HHHHHcCCCchHHHHHHHHHHHHHhhhHH------hCccC--C-Cch-HhHHHHHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence            9999999865432 222222222222111      11211  0 011 1123445678888888888888765432210 


Q ss_pred             cCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhc--
Q 010334          271 NNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACK--  348 (513)
Q Consensus       271 ~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~--  348 (513)
                      ........|+++.+++..      +..++++++..+++++++||+|||+.+++|++++|++||++|+++++|++++.+  
T Consensus       226 ~~~~~~~~d~l~~ll~~~------~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~  299 (452)
T PLN03141        226 EDETGIPKDVVDVLLRDG------SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLK  299 (452)
T ss_pred             ccccCChhhHHHHHHhcC------CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhcc
Confidence            000012358888888642      125899999999999999999999999999999999999999999999988753  


Q ss_pred             --CCCccchhhccCCchHHHHHHhhccCCCCCcCccccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCCCCCc
Q 010334          349 --GKSKIQEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECFRPER  426 (513)
Q Consensus       349 --~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R  426 (513)
                        .+..++.+++.+||||+|||+|+||++|+++..+|.+.+|++++||.||||+.|.++.+.+|+||++|+||++|+|||
T Consensus       300 ~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeR  379 (452)
T PLN03141        300 ADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWR  379 (452)
T ss_pred             CCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCccc
Confidence              234579999999999999999999999999878999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceEEee
Q 010334          427 FEGSSTDFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQVIAT  506 (513)
Q Consensus       427 ~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (513)
                      |++++.    .+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++..     .   ...+++|+.++.|.++
T Consensus       380 fl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~-----~---~~~~~~~~~~~~~~~~  447 (452)
T PLN03141        380 WQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTI-----V---NFPTVRMKRKLPIWVT  447 (452)
T ss_pred             ccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCe-----e---ecccccCCCCceEEEE
Confidence            997532    356799999999999999999999999999999999999865421     1   1246788899999999


Q ss_pred             ccCC
Q 010334          507 TRIP  510 (513)
Q Consensus       507 ~r~~  510 (513)
                      +|.+
T Consensus       448 ~~~~  451 (452)
T PLN03141        448 RIDD  451 (452)
T ss_pred             eCCC
Confidence            9954


No 27 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.3e-69  Score=530.36  Aligned_cols=439  Identities=24%  Similarity=0.373  Sum_probs=342.8

Q ss_pred             CCCCCCCCCCCCCcccccccccC----CCCChHHHHHHHHhcCC--cEEEecCCccEEEEcCHHHHHHHHHhcccccCCC
Q 010334           37 NGQGKQPPGPKPLPILGNLHQLA----DGQPHHVMTKLCRKYGP--VMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQR  110 (513)
Q Consensus        37 ~~~~~~~PgP~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~  110 (513)
                      ..+.+.||||+++|++|+++++.    .++++.++.+++++||+  +|++++++.++++++||+.+++|+.++ ..|..+
T Consensus        38 ~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~  116 (490)
T PLN02302         38 EGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPG  116 (490)
T ss_pred             cCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccC
Confidence            34557899999999999988763    34688889999999997  799999999999999999999999765 344433


Q ss_pred             CCccchhhcccCCceEEEccCChhHHHHHhhhhhhcC-CHHHHHhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHH
Q 010334          111 PEVYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELL-SNKRVQSFRSIREDEVWGLVEFISSNQGRPINLSEKIFTMTN  189 (513)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f-~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~  189 (513)
                      ........  . +...+...+|+.|+++|+.+ .+.| +.++++.+.+.+.+.+.++++.+..  ++.+|+.+.+..+++
T Consensus       117 ~~~~~~~~--~-g~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--~~~v~~~~~~~~~~~  190 (490)
T PLN02302        117 WPESTVEL--I-GRKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK--MGEIEFLTELRKLTF  190 (490)
T ss_pred             CchhHHHH--h-ccccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCEehHHHHHHHHH
Confidence            21111111  1 22334556899999999996 6667 5788999999999999999998863  346999999999999


Q ss_pred             HHHHHHHhcCCCCchh-hHHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010334          190 DIIARAAFGRKNSDQH-NFTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAA  268 (513)
Q Consensus       190 dvi~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (513)
                      +++++++||.+..... .+.............  ....+|..        ...+..+..+.+.+++.+.++++++.... 
T Consensus       191 ~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~l~~~~~~~i~~~~~~~~~-  259 (490)
T PLN02302        191 KIIMYIFLSSESELVMEALEREYTTLNYGVRA--MAINLPGF--------AYHRALKARKKLVALFQSIVDERRNSRKQ-  259 (490)
T ss_pred             HHHHHHHcCCCChHHHHHHHHHHHHHHHHhhh--CCcCCCch--------hhHHHHHHHHHHHHHHHHHHHHHHHhhhc-
Confidence            9999999998765421 221211111111100  00011111        11234455677778888888777544221 


Q ss_pred             hccCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhc
Q 010334          269 ANNNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACK  348 (513)
Q Consensus       269 ~~~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~  348 (513)
                         .......|+++.+++..++.   +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++
T Consensus       260 ---~~~~~~~d~l~~ll~~~~~~---~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~  333 (490)
T PLN02302        260 ---NISPRKKDMLDLLLDAEDEN---GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAK  333 (490)
T ss_pred             ---cCCCCcCCHHHHHHhhhccC---CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHh
Confidence               11124578999999764331   235899999999999999999999999999999999999999999999999886


Q ss_pred             CC----CccchhhccCCchHHHHHHhhccCCCCCcCccccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCCCC
Q 010334          349 GK----SKIQEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECFRP  424 (513)
Q Consensus       349 ~~----~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  424 (513)
                      ..    ..++++++++||||+|||+|+||++|+++...|.+.+|++++||.||||+.|.++.+.+|+||++|+||++|+|
T Consensus       334 ~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~P  413 (490)
T PLN02302        334 KRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDP  413 (490)
T ss_pred             cCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccCh
Confidence            42    23789999999999999999999999999889999999999999999999999999999999999999999999


Q ss_pred             CcccCCCCCccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceEE
Q 010334          425 ERFEGSSTDFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQVI  504 (513)
Q Consensus       425 ~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (513)
                      |||++.+.    .+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++..    +.  ....+..|++++.|+
T Consensus       414 eR~~~~~~----~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~----~~--~~~~~~~p~~~~~~~  483 (490)
T PLN02302        414 SRWDNYTP----KAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC----KV--MYLPHPRPKDNCLAR  483 (490)
T ss_pred             hhcCCCCC----CCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC----cc--eeCCCCCCCCCceEE
Confidence            99996532    345789999999999999999999999999999999999865421    12  123347899999999


Q ss_pred             eeccC
Q 010334          505 ATTRI  509 (513)
Q Consensus       505 ~~~r~  509 (513)
                      +++|.
T Consensus       484 ~~~~~  488 (490)
T PLN02302        484 ITKVA  488 (490)
T ss_pred             EEecc
Confidence            99885


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.3e-69  Score=519.92  Aligned_cols=435  Identities=19%  Similarity=0.302  Sum_probs=334.2

Q ss_pred             CCCCCCCCCCCCCcccccccccC----CCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCC
Q 010334           37 NGQGKQPPGPKPLPILGNLHQLA----DGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPE  112 (513)
Q Consensus        37 ~~~~~~~PgP~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~  112 (513)
                      ..+.+.||||.++|++||++++.    ..+++.++.+++++||++|++++++.++++|+||+.+++++.++...|.++..
T Consensus        26 ~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~  105 (472)
T PLN02987         26 YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP  105 (472)
T ss_pred             cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc
Confidence            34445789999999999998863    24578889999999999999999999999999999999999887766654422


Q ss_pred             ccchhhcccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHH-HHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHH
Q 010334          113 VYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRS-IREDEVWGLVEFISSNQGRPINLSEKIFTMTNDI  191 (513)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~dv  191 (513)
                      .......   +...++..+|+.|+++|+++ .+.++...++.+.. .+.+.+...++.+    ++++++.+.+.++++++
T Consensus       106 ~~~~~~l---g~~~l~~~~g~~wr~~R~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~t~~v  177 (472)
T PLN02987        106 GSISNLL---GKHSLLLMKGNLHKKMHSLT-MSFANSSIIKDHLLLDIDRLIRFNLDSW----SSRVLLMEEAKKITFEL  177 (472)
T ss_pred             HHHHHHh---CcccccccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHhh----ccceehHHHHHHHHHHH
Confidence            1112222   22334455899999999995 55555555544321 1223333333333    24699999999999999


Q ss_pred             HHHHHhcCCCCch-hhHHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 010334          192 IARAAFGRKNSDQ-HNFTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAAAN  270 (513)
Q Consensus       192 i~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  270 (513)
                      +++++||.+.... +.+...+.....   .+ ....+|++      ....++..+.++.+.+++.+.++++++....   
T Consensus       178 i~~~~fg~~~~~~~~~~~~~~~~~~~---~~-~~~~~p~l------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---  244 (472)
T PLN02987        178 TVKQLMSFDPGEWTESLRKEYVLVIE---GF-FSVPLPLF------STTYRRAIQARTKVAEALTLVVMKRRKEEEE---  244 (472)
T ss_pred             HHHHHcCCCChHHHHHHHHHHHHHHh---hh-hcCCCcCC------CchHHHHHHHHHHHHHHHHHHHHHHHhhhhc---
Confidence            9999999866432 222222222211   11 11123322      1234556677888888888888887654321   


Q ss_pred             cCcccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcC-
Q 010334          271 NNVKLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACKG-  349 (513)
Q Consensus       271 ~~~~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-  349 (513)
                      +  .....|+++.+++..       ..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++.+. 
T Consensus       245 ~--~~~~~d~l~~ll~~~-------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~  315 (472)
T PLN02987        245 G--AEKKKDMLAALLASD-------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMK  315 (472)
T ss_pred             c--CcccccHHHHHHhcC-------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHccc
Confidence            1  123468999999642       148999999999999999999999999999999999999999999999998752 


Q ss_pred             --CCccchhhccCCchHHHHHHhhccCCCCCcCccccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCCCCCcc
Q 010334          350 --KSKIQEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECFRPERF  427 (513)
Q Consensus       350 --~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~  427 (513)
                        +..++.+++.+|||++||++|+||++|+++...|.+.+|++++||.||||+.|.++.+.+|+||++|+||++|+||||
T Consensus       316 ~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRf  395 (472)
T PLN02987        316 SDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRW  395 (472)
T ss_pred             CCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccC
Confidence              345789999999999999999999999998779999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceEEeec
Q 010334          428 EGSSTDFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQVIATT  507 (513)
Q Consensus       428 ~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (513)
                      ++++.. ......++|||+|+|.|+|++||+.|++++++.|+++|++++.++.+   +.+    ..+++|.+++.+++++
T Consensus       396 l~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~----~~~~~p~~~~~~~~~~  467 (472)
T PLN02987        396 QSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK---LVF----FPTTRTQKRYPINVKR  467 (472)
T ss_pred             CCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc---eee----cccccCCCCceEEEEe
Confidence            975432 12345789999999999999999999999999999999999865432   122    3477899999999999


Q ss_pred             cC
Q 010334          508 RI  509 (513)
Q Consensus       508 r~  509 (513)
                      |.
T Consensus       468 r~  469 (472)
T PLN02987        468 RD  469 (472)
T ss_pred             cc
Confidence            84


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=7.4e-69  Score=520.22  Aligned_cols=450  Identities=25%  Similarity=0.351  Sum_probs=343.3

Q ss_pred             CCCCCCcccccccccC----CCCChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccchhhc
Q 010334           44 PGPKPLPILGNLHQLA----DGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVEIM  119 (513)
Q Consensus        44 PgP~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~~~~~  119 (513)
                      -|-.+||.+|..++..    .+.++..+.+|+++||++|++++++.++++++||+++++|+.+....|.+++....... 
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~-   93 (489)
T PLN02936         15 GDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEF-   93 (489)
T ss_pred             CCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHH-
Confidence            4667899999887653    45688899999999999999999999999999999999999876666766543221111 


Q ss_pred             ccCCceEEEccCChhHHHHHhhhhhhcCCHHHHHhhHH-HHHHHHHHHHHHHHh--cCCCceehHHHHHHHHHHHHHHHH
Q 010334          120 SYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRS-IREDEVWGLVEFISS--NQGRPINLSEKIFTMTNDIIARAA  196 (513)
Q Consensus       120 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~-~~~~~~~~~~~~l~~--~~~~~~d~~~~~~~~~~dvi~~~~  196 (513)
                       ..+. .++..+|+.|+++|+++ .+.|+..+++.+.+ ++.+.++.+++.+.+  ..++++|+.+++..+++|+++.++
T Consensus        94 -~~~~-~i~~~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~  170 (489)
T PLN02936         94 -LFGS-GFAIAEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSV  170 (489)
T ss_pred             -HhcC-ccccCCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Confidence             1123 34556899999999996 88999888887654 778888999988874  346789999999999999999999


Q ss_pred             hcCCCCch---hhHHHHHHHHHHhccccccccccccccc--ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 010334          197 FGRKNSDQ---HNFTVLLEEIMKIGAGFAIADLYPSLTF--LRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAAANN  271 (513)
Q Consensus       197 fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  271 (513)
                      ||.+++..   .++...+........ ......+|++..  +..+....+...++.+.+.+++.+.++++++........
T Consensus       171 fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~  249 (489)
T PLN02936        171 FNYNFDSLTTDSPVIQAVYTALKEAE-TRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEV  249 (489)
T ss_pred             cCCCccccccCcHHHHHHHHHHHHHH-HhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            99987642   223333333222211 111122333211  011111233455667777788888887766433211100


Q ss_pred             C--c---ccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHH
Q 010334          272 N--V---KLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQA  346 (513)
Q Consensus       272 ~--~---~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~  346 (513)
                      .  .   .....|+++.|++..+       .++++++.+++.++++||+||||++++|++|+|++||++|+++++|++++
T Consensus       250 ~~~~~~~~~~~~d~l~~ll~~~~-------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~  322 (489)
T PLN02936        250 IEGEEYVNDSDPSVLRFLLASRE-------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRV  322 (489)
T ss_pred             cccccccccCchHHHHHHHhccc-------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            0  0   1124678888886321       38899999999999999999999999999999999999999999999999


Q ss_pred             hcCCCccchhhccCCchHHHHHHhhccCCCCCcCc-cccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCCCCC
Q 010334          347 CKGKSKIQEADIQKLDYLKLVIKETFRLHAPGPFT-PREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECFRPE  425 (513)
Q Consensus       347 ~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~  425 (513)
                      +++ ..++++++++||||+|||+||||++|+++.. .|.+.+|+.++||.||+|+.|+++.+.+|+||++||||++|+||
T Consensus       323 ~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~Pe  401 (489)
T PLN02936        323 LQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPE  401 (489)
T ss_pred             hcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCcc
Confidence            875 4578999999999999999999999999877 55557778889999999999999999999999999999999999


Q ss_pred             cccCCCCC--ccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceE
Q 010334          426 RFEGSSTD--FKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQV  503 (513)
Q Consensus       426 R~~~~~~~--~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (513)
                      ||+.++..  .......|+|||.|+|.|+|++||++|+++++++|+++|++++++++.   +..  ..+++..|+++++|
T Consensus       402 Rwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~---~~~--~~~~~~~~~~~~~v  476 (489)
T PLN02936        402 RFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQD---IVM--TTGATIHTTNGLYM  476 (489)
T ss_pred             ccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCc---cce--ecceEEeeCCCeEE
Confidence            99964421  122345799999999999999999999999999999999999876532   222  23456678889999


Q ss_pred             EeeccCCC
Q 010334          504 IATTRIPF  511 (513)
Q Consensus       504 ~~~~r~~~  511 (513)
                      ++++|.-+
T Consensus       477 ~~~~R~~~  484 (489)
T PLN02936        477 TVSRRRVP  484 (489)
T ss_pred             EEEeeeCC
Confidence            99888644


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=9.6e-68  Score=511.06  Aligned_cols=435  Identities=20%  Similarity=0.279  Sum_probs=329.9

Q ss_pred             CcccccccccCCCCChHHHHHHHHhcC-CcEEEecCCccEEEEcCHHHHHHHHHhcccccCCCCCccchhhcccCCceEE
Q 010334           49 LPILGNLHQLADGQPHHVMTKLCRKYG-PVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVEIMSYDHSSIV  127 (513)
Q Consensus        49 ~p~lG~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvi~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (513)
                      .++.|++..... +...++..+.++++ .++++...+.  ++++||+.+++|+.++...|.+....... .....+. .+
T Consensus        49 ~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~-~~~~~g~-gi  123 (502)
T PLN02426         49 AYLTASWAKDFD-NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAI-LGDLLGR-GI  123 (502)
T ss_pred             CCccHHHHHhcc-cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHH-HHHhcCC-ce
Confidence            457788766423 45677777888887 5788876664  89999999999998776566554322111 1112233 45


Q ss_pred             EccCChhHHHHHhhhhhhcCCHHHHHhhH--HHHHHHHHHHHHHHHh----cCCCceehHHHHHHHHHHHHHHHHhcCCC
Q 010334          128 FAPYGDYWREMRKISVLELLSNKRVQSFR--SIREDEVWGLVEFISS----NQGRPINLSEKIFTMTNDIIARAAFGRKN  201 (513)
Q Consensus       128 ~~~~g~~w~~~R~~~~~~~f~~~~l~~~~--~~~~~~~~~~~~~l~~----~~~~~~d~~~~~~~~~~dvi~~~~fG~~~  201 (513)
                      ++.+|+.|+++||.+ .+.|+..+++.+.  +.+.+.++.+++.+.+    +.+.++|+.++++.+++|+|+.++||.++
T Consensus       124 ~~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        124 FNVDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             eecCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence            667899999999996 8999999988763  6677777777777753    22467999999999999999999999987


Q ss_pred             Cch------hhHHHHHHHHHHhcccccccccccccccc-ccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Q 010334          202 SDQ------HNFTVLLEEIMKIGAGFAIADLYPSLTFL-RPL-TGVKPALMRIQKKMDKILEDIVAEHKLKRKAAANNNV  273 (513)
Q Consensus       202 ~~~------~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  273 (513)
                      +..      .++...+......... .....+|++..+ ..+ .+..++..+..+.+.+++.+.++++++..        
T Consensus       203 ~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~--------  273 (502)
T PLN02426        203 GCLELSLPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG--------  273 (502)
T ss_pred             cccCCCCCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc--------
Confidence            532      2333433333221111 011112222111 111 12234556777888888888888775431        


Q ss_pred             ccccchHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcCC-Cc
Q 010334          274 KLEEEDLVDTLLNYAEATNKNEFHLTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACKGK-SK  352 (513)
Q Consensus       274 ~~~~~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~-~~  352 (513)
                      .....|+++.+++..         .+++++.+++.++++||+|||+++|+|++|+|++||++|+|+++||+++++.+ ..
T Consensus       274 ~~~~~dll~~ll~~~---------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~  344 (502)
T PLN02426        274 FSASKDLLSRFMASI---------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEA  344 (502)
T ss_pred             cCCcchHHHHHHhcC---------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCC
Confidence            123468999998632         26789999999999999999999999999999999999999999999988654 36


Q ss_pred             cchhhccCCchHHHHHHhhccCCCCCcCcccccccccee-eCcccCCCCEEEEeccccccCCCCC-CCCCCCCCCcccCC
Q 010334          353 IQEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEI-RGYTIPAKAKILINLHAIGRDPTVW-KDPECFRPERFEGS  430 (513)
Q Consensus       353 ~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~  430 (513)
                      ++++++++||||+|||+|+||++|+++...|.+.+|.++ +|+.|||||.|.++.+.+|+||++| |||++|+||||+++
T Consensus       345 ~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~  424 (502)
T PLN02426        345 ASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKN  424 (502)
T ss_pred             CCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCC
Confidence            899999999999999999999999999889999999887 9999999999999999999999999 99999999999974


Q ss_pred             CCCccCCccceeccCCCCCCCcchHHHHHHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceEEeeccCC
Q 010334          431 STDFKGNHFELIPFGGGRRICPGISFATANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQVIATTRIP  510 (513)
Q Consensus       431 ~~~~~~~~~~~~pFg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  510 (513)
                      .......+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.. ..+..  ..+++.+|+++++|++++|..
T Consensus       425 ~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~~~--~~~~~~~~~~gl~v~~~~r~~  501 (502)
T PLN02426        425 GVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSN-RAPRF--APGLTATVRGGLPVRVRERVR  501 (502)
T ss_pred             CCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCC-CCCcc--cceeEEecCCCEEEEEEEccC
Confidence            321122456789999999999999999999999999999999999864322 11122  336778899999999999853


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.1e-60  Score=452.19  Aligned_cols=405  Identities=18%  Similarity=0.234  Sum_probs=294.2

Q ss_pred             CCCCCCCCCCCCcccccccccC----CCCChHHHHHHHHhcCC-cEEEecCCccE-------EEEcCHHHHHHHHHh---
Q 010334           38 GQGKQPPGPKPLPILGNLHQLA----DGQPHHVMTKLCRKYGP-VMKLKLGQLDA-------VIISSPEAAKEVLKT---  102 (513)
Q Consensus        38 ~~~~~~PgP~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------vvi~dp~~i~~i~~~---  102 (513)
                      .+.+.|||+.++|++|.+.++.    ..++..++.+.++|||+ ||+++++|.++       |+++||+.++.+|.+   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            4667799999999999997643    34567999999999999 99999999665       999999999999964   


Q ss_pred             -cccccCCCCCccchhhcccCCce---EEEccCChhHHHHHhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHh--cCCC
Q 010334          103 -NEIKFAQRPEVYAVEIMSYDHSS---IVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDEVWGLVEFISS--NQGR  176 (513)
Q Consensus       103 -~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~--~~~~  176 (513)
                       +...+..... ....   ..+.+   .++..+|+.|+++|+++ .+.|+ ..++.+.+.+.+.+++.++.|..  ..+.
T Consensus        94 ~~~~~~~~~~~-~~~~---l~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~  167 (480)
T PLN02648         94 DKRDVFTGTYM-PSTA---FTGGYRVLSYLDPSEPKHAKLKSFL-FELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKG  167 (480)
T ss_pred             cccccceeeec-cCcc---ccCCceeeeecCCCCchHHHHHHHH-HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCC
Confidence             3222222111 1111   22333   56677899999999996 78898 57788999999999999999963  3445


Q ss_pred             ceehHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHhcccccccccccccccccccccchHHHHHHHHHHHHHHHH
Q 010334          177 PINLSEKIFTMTNDIIARAAFGRKNSDQHNFTVLLEEIMKIGAGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILED  256 (513)
Q Consensus       177 ~~d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (513)
                      ++|+.+.++.+++|++++++||.+.+.. .+...+..+......   ...+|.....                +..++++
T Consensus       168 ~vdv~~~~~~lt~~vi~~~lfG~~~~~~-~l~~~~~~~~~~~~~---~~~~p~~~~~----------------l~~~~~~  227 (480)
T PLN02648        168 KAEFNDPLDQMAFNFLCKALTGKDPSET-ALGSDGPALIQKWLA---LQLAPLASTG----------------LPHVLEE  227 (480)
T ss_pred             CccccchHHHHHHHHHHHHHcCCCcchh-hhccchhHHHHHHHH---HHhhHHHHcC----------------chHHHHH
Confidence            7999999999999999999999866541 121111111110000   0001110000                0000011


Q ss_pred             HHHHHHHHHHhhhccCccccc-------chHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH-HhhccccchHHHHHHHHHH
Q 010334          257 IVAEHKLKRKAAANNNVKLEE-------EDLVDTLLNYAEATNKNEFHLTIDQVKAVTLD-IFSAGSETSATSMEWAMSE  328 (513)
Q Consensus       257 ~i~~~~~~~~~~~~~~~~~~~-------~d~~~~l~~~~~~~~~~~~~l~~~~i~~~~~~-~~~ag~~tta~~l~~~l~~  328 (513)
                      .+.++.......    .....       .+..+.+++...+     ..++++|+.++++. +.+++++||+++++|++|+
T Consensus       228 ~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ll~~~~~-----~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~  298 (480)
T PLN02648        228 LLLHTFPLPFFL----VKSDYDKLYDFFRASATEALDLAEK-----FGISREEALHNLLFVLGFNAFGGFKIFFPALLKW  298 (480)
T ss_pred             HhhcccCCchhh----hhccHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            000000000000    00000       1112334433322     14999999999876 4477788888999999999


Q ss_pred             HhhCch-hHHHHHHHHHHHhcC-CCccchhhccCCchHHHHHHhhccCCCCCcCccccccccceee----CcccCCCCEE
Q 010334          329 LLKNPR-VMKKAQEEVRQACKG-KSKIQEADIQKLDYLKLVIKETFRLHAPGPFTPREAREKCEIR----GYTIPAKAKI  402 (513)
Q Consensus       329 l~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~----g~~ip~G~~v  402 (513)
                      |++||+ +|++|++||+.+++. +..++.+++++||||++||+|+||++|+++...|++.+|++++    ||.||||+.|
T Consensus       299 L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V  378 (480)
T PLN02648        299 VGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEML  378 (480)
T ss_pred             HHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEE
Confidence            999995 999999999999863 4568999999999999999999999999998899999999996    7999999999


Q ss_pred             EEeccccccCCCCCCCCCCCCCCcccCCCCCccCCccceecc---------CCCCCCCcchHHHHHHHHHHHHHhhhhcc
Q 010334          403 LINLHAIGRDPTVWKDPECFRPERFEGSSTDFKGNHFELIPF---------GGGRRICPGISFATANIELGLAQLMYHFD  473 (513)
Q Consensus       403 ~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~~~~~~pF---------g~G~r~C~G~~~a~~~~~~~l~~ll~~f~  473 (513)
                      +++.+.+|+||++|+||++|+|+||++++..   ....+++|         |+|+|.|+|++||++|++++++.|+++|+
T Consensus       379 ~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~  455 (480)
T PLN02648        379 FGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYD  455 (480)
T ss_pred             EEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999865321   11233444         67789999999999999999999999998


Q ss_pred             -ccccCCC
Q 010334          474 -WKLANGE  480 (513)
Q Consensus       474 -~~~~~~~  480 (513)
                       +++.++.
T Consensus       456 ~~~l~~~~  463 (480)
T PLN02648        456 SFEIEVDT  463 (480)
T ss_pred             EEeecCCc
Confidence             9987654


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.3e-55  Score=415.07  Aligned_cols=383  Identities=23%  Similarity=0.375  Sum_probs=306.5

Q ss_pred             ChHHHHHHHHhcCCcEEEecCCcc--EEEEcCHHHHHHHHHhcccccCCCCCccchh--hcccCCceEEEccCChhHHHH
Q 010334           63 PHHVMTKLCRKYGPVMKLKLGQLD--AVIISSPEAAKEVLKTNEIKFAQRPEVYAVE--IMSYDHSSIVFAPYGDYWREM  138 (513)
Q Consensus        63 ~~~~~~~~~~kyG~v~~~~~~~~~--~vvi~dp~~i~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~w~~~  138 (513)
                      +......+.+.||.++++...+..  .+++++++.+++++.++. .+.+........  .....+...+...+|+.|.++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            445567788889999999877765  799999999999997764 111111111110  111223333667789999999


Q ss_pred             HhhhhhhcCCHHHHHhhHHHHHHHHHHHHHHHHhcCCCceehHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHhc
Q 010334          139 RKISVLELLSNKRVQSFRSIREDEVWGLVEFISSNQGRPINLSEKIFTMTNDIIARAAFGRKNSDQHNFTVLLEEIMKIG  218 (513)
Q Consensus       139 R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~  218 (513)
                      ||++ .+.|+++.++.+.+.+.+.+.++++.+ ... +.+++.+.+..+++++|+ .+||.+..+...+...........
T Consensus       103 Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~~~~~~~~~~~~~  178 (411)
T COG2124         103 RKLL-APAFTPRALRGYRPLIREIADRLLDDL-WQG-GADLVLDFAAELTLRVIA-ELLGVPLEDRPQLLRWSDALLLRL  178 (411)
T ss_pred             HHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-ccC-CchhHHHHhhhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHhcc
Confidence            9995 899999999999999999999999988 433 788999999999999999 999998877654444433333220


Q ss_pred             ccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcccccchHHHHHHHHHHhcCCCCCCC
Q 010334          219 AGFAIADLYPSLTFLRPLTGVKPALMRIQKKMDKILEDIVAEHKLKRKAAANNNVKLEEEDLVDTLLNYAEATNKNEFHL  298 (513)
Q Consensus       219 ~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~l  298 (513)
                      .        |...    ......+..++...+.+++..++++++.           ...+|+++.|+...++.+   ..+
T Consensus       179 ~--------~~~~----~~~~~~~~~~a~~~~~~~~~~li~~rR~-----------~~~~dlls~l~~a~~~~~---~~l  232 (411)
T COG2124         179 D--------PDLG----PEEPWRRARAARRELDAYLRALIAERRA-----------APRDDLLSLLLSAEDDGG---GRL  232 (411)
T ss_pred             C--------cccC----CcccHHHHHHHHHHHHHHHHHHHHHhcc-----------CCcccHHHHHHHHhhCCC---CcC
Confidence            0        1110    1112356678888999999999998872           467899999998776532   269


Q ss_pred             CHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcCCCccchhhccCCchHHHHHHhhccCCCCC
Q 010334          299 TIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQACKGKSKIQEADIQKLDYLKLVIKETFRLHAPG  378 (513)
Q Consensus       299 ~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~  378 (513)
                      +++||.++++++++||+|||+++|+|++|.|++||++++++++|.+.                ||+.++|+|+||++||+
T Consensus       233 sd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv  296 (411)
T COG2124         233 SDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPV  296 (411)
T ss_pred             CHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCch
Confidence            99999999999999999999999999999999999999999998653                89999999999999999


Q ss_pred             cCccccccccceeeCcccCCCCEEEEeccccccCCCCCCCCCCCCCCcccCCCCCccCCccceeccCCCCCCCcchHHHH
Q 010334          379 PFTPREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWKDPECFRPERFEGSSTDFKGNHFELIPFGGGRRICPGISFAT  458 (513)
Q Consensus       379 ~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~  458 (513)
                      +...|.+++|++++|+.||||+.|++.++..||||++|++|++|||+||.          ..|+|||+|+|.|+|..||+
T Consensus       297 ~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA~  366 (411)
T COG2124         297 PLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAALAR  366 (411)
T ss_pred             hccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHHHHH
Confidence            98899999999999999999999999999999999999999999999997          46899999999999999999


Q ss_pred             HHHHHHHHHhhhhccccccCCCCCCCCCCCcccCccccccCCceEEeecc
Q 010334          459 ANIELGLAQLMYHFDWKLANGERLEDLDMSENFGMTARRKENLQVIATTR  508 (513)
Q Consensus       459 ~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  508 (513)
                      +|++++++.||++|++....+ . .  ...  ...+..+.++..+.++.|
T Consensus       367 ~E~~~~l~~ll~r~~~~~~~~-~-~--~~~--~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         367 LELKVALAELLRRFPLLLLAE-P-P--PLV--RRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             HHHHHHHHHHHHhCchhhcCC-C-C--Ccc--ccccccCCCcceeeeecC
Confidence            999999999999999887654 1 1  121  233345666666666654


No 33 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=78.25  E-value=1.4  Score=28.24  Aligned_cols=8  Identities=38%  Similarity=0.621  Sum_probs=6.5

Q ss_pred             CCCcccCC
Q 010334          423 RPERFEGS  430 (513)
Q Consensus       423 ~P~R~~~~  430 (513)
                      ||||||+-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78999964


No 34 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=69.37  E-value=15  Score=22.40  Aligned_cols=43  Identities=19%  Similarity=0.206  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHH
Q 010334          301 DQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEV  343 (513)
Q Consensus       301 ~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei  343 (513)
                      -++..++..++-.|.|..+-.++--+.....||+...++-.|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            3566677778888888888888888888889999988887775


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=50.39  E-value=14  Score=23.45  Aligned_cols=18  Identities=33%  Similarity=0.589  Sum_probs=15.6

Q ss_pred             HHHHHhhCchhHHHHHHH
Q 010334          325 AMSELLKNPRVMKKAQEE  342 (513)
Q Consensus       325 ~l~~l~~~p~~~~~l~~E  342 (513)
                      ++.||..||++.++|.+.
T Consensus         5 iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHChHHHHHHHcC
Confidence            567899999999999874


No 36 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=47.34  E-value=15  Score=28.20  Aligned_cols=22  Identities=23%  Similarity=0.406  Sum_probs=16.5

Q ss_pred             CCCcchHHHHHHHHHHHHHhhh
Q 010334          449 RICPGISFATANIELGLAQLMY  470 (513)
Q Consensus       449 r~C~G~~~a~~~~~~~l~~ll~  470 (513)
                      -+|.|++||+..+-.++..|+.
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIt   39 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLIT   39 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHH
T ss_pred             ecccchHHHHHHHHHHHHHHhc
Confidence            3799999999999999999986


No 37 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=41.12  E-value=13  Score=23.15  Aligned_cols=11  Identities=45%  Similarity=0.893  Sum_probs=9.2

Q ss_pred             eccCCCCCCCc
Q 010334          442 IPFGGGRRICP  452 (513)
Q Consensus       442 ~pFg~G~r~C~  452 (513)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            37999999994


No 38 
>PHA03049 IMV membrane protein; Provisional
Probab=39.91  E-value=75  Score=20.81  Aligned_cols=29  Identities=14%  Similarity=0.455  Sum_probs=14.3

Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCCCCCCCC
Q 010334           18 VLLSFLLFLLMLIRYWKNSNGQGKQPPGP   46 (513)
Q Consensus        18 v~~~~~~~~~~~~~~~~~~~~~~~~~PgP   46 (513)
                      +++++++..+.++-.+.+.......+|.|
T Consensus         8 ~iICVaIi~lIvYgiYnkk~~~q~~~p~~   36 (68)
T PHA03049          8 VIICVVIIGLIVYGIYNKKTTTSQNPPSQ   36 (68)
T ss_pred             HHHHHHHHHHHHHHHHhcccccCCCCCCh
Confidence            44444444445554554444455555554


No 39 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=39.88  E-value=58  Score=22.88  Aligned_cols=18  Identities=11%  Similarity=0.337  Sum_probs=15.4

Q ss_pred             CchhHHHHHHHHHHHhcC
Q 010334          332 NPRVMKKAQEEVRQACKG  349 (513)
Q Consensus       332 ~p~~~~~l~~Ei~~~~~~  349 (513)
                      .|++.+.+|+||-+++..
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            399999999999988754


No 40 
>PF08114 PMP1_2:  ATPase proteolipid family;  InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase. Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].
Probab=38.49  E-value=20  Score=20.69  Aligned_cols=17  Identities=18%  Similarity=0.511  Sum_probs=9.7

Q ss_pred             HHHHHHHHHHHHHhhCC
Q 010334           20 LSFLLFLLMLIRYWKNS   36 (513)
Q Consensus        20 ~~~~~~~~~~~~~~~~~   36 (513)
                      +.+.+.+.+.++.|..+
T Consensus        20 v~i~iva~~iYRKw~aR   36 (43)
T PF08114_consen   20 VGIGIVALFIYRKWQAR   36 (43)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            34445566677777543


No 41 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=36.96  E-value=22  Score=29.79  Aligned_cols=44  Identities=16%  Similarity=0.137  Sum_probs=32.1

Q ss_pred             CCchHHHHHHhhccCCCCCcCccccccccceeeCcccCCCCEEEE
Q 010334          360 KLDYLKLVIKETFRLHAPGPFTPREAREKCEIRGYTIPAKAKILI  404 (513)
Q Consensus       360 ~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~  404 (513)
                      .-..+.|||.|+.-...-. ...=+..+|+.++|..|||||.|+-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs-~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGS-RVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCC-EEEEEEcCceEECCEEeCCCCEEEE
Confidence            4467889999997665422 2222457899999999999997764


No 42 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=36.89  E-value=1.5e+02  Score=20.91  Aligned_cols=50  Identities=12%  Similarity=0.072  Sum_probs=42.3

Q ss_pred             CCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHh
Q 010334          298 LTIDQVKAVTLDIFSAGSETSATSMEWAMSELLKNPRVMKKAQEEVRQAC  347 (513)
Q Consensus       298 l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~  347 (513)
                      ...+.........++-=+..++....-.+.+-++||+..+++.+.+.+-+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            44566666777788888999999999999999999999999999887654


No 43 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=36.24  E-value=52  Score=18.98  Aligned_cols=12  Identities=8%  Similarity=0.412  Sum_probs=9.7

Q ss_pred             hhCchhHHHHHH
Q 010334          330 LKNPRVMKKAQE  341 (513)
Q Consensus       330 ~~~p~~~~~l~~  341 (513)
                      .+|||+++.+++
T Consensus        24 ~~HPei~~~i~~   35 (38)
T PF14483_consen   24 ERHPEIQQEIRS   35 (38)
T ss_dssp             HHSTHHHHHHHT
T ss_pred             HhChhHHHHHHh
Confidence            389999988775


No 44 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=31.96  E-value=10  Score=35.61  Aligned_cols=44  Identities=11%  Similarity=0.078  Sum_probs=32.3

Q ss_pred             CCchHHHHHHhhccCCCCCcCccccccccceeeCcccCCCCEEEE
Q 010334          360 KLDYLKLVIKETFRLHAPGPFTPREAREKCEIRGYTIPAKAKILI  404 (513)
Q Consensus       360 ~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~  404 (513)
                      .-..+.|||.|+.-..--. ...=+..+|+.++|..||+||.|+-
T Consensus       254 ~~n~I~A~V~~~qtv~~G~-~vrlRLle~~~v~~~~ipkgt~l~g  297 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGS-AVKLRLLEPIQAGDLVIPKGTVLYG  297 (410)
T ss_pred             CCCceEEEEcCceEEecCC-EEEEEEcCceeeCCEEecCCCEEEE
Confidence            4567889999988766422 1222357899999999999997754


No 45 
>PHA03162 hypothetical protein; Provisional
Probab=29.87  E-value=44  Score=25.42  Aligned_cols=24  Identities=25%  Similarity=0.576  Sum_probs=20.9

Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHh
Q 010334          445 GGGRRICPGISFATANIELGLAQL  468 (513)
Q Consensus       445 g~G~r~C~G~~~a~~~~~~~l~~l  468 (513)
                      ++|.+.|||+...+-++..=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            469999999999999988888776


No 46 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=28.35  E-value=2e+02  Score=27.89  Aligned_cols=28  Identities=18%  Similarity=0.267  Sum_probs=18.0

Q ss_pred             HhcCCcEEEecCCccEEE-EcCHHHHHHH
Q 010334           72 RKYGPVMKLKLGQLDAVI-ISSPEAAKEV   99 (513)
Q Consensus        72 ~kyG~v~~~~~~~~~~vv-i~dp~~i~~i   99 (513)
                      -+||.|+.-.+-++.+-| |..++..+..
T Consensus       221 Grfg~V~KaqL~~~~VAVKifp~~~kqs~  249 (534)
T KOG3653|consen  221 GRFGCVWKAQLDNRLVAVKIFPEQEKQSF  249 (534)
T ss_pred             CccceeehhhccCceeEEEecCHHHHHHH
Confidence            378888888887766554 5555544433


No 47 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=27.84  E-value=1.6e+02  Score=18.29  Aligned_cols=35  Identities=31%  Similarity=0.416  Sum_probs=24.5

Q ss_pred             HHHHHHhcCCcEEEecCCcc----EEEEcCHHHHHHHHH
Q 010334           67 MTKLCRKYGPVMKLKLGQLD----AVIISSPEAAKEVLK  101 (513)
Q Consensus        67 ~~~~~~kyG~v~~~~~~~~~----~vvi~dp~~i~~i~~  101 (513)
                      +.+..++||+|-++.+....    +|-..+++.++....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            35678899999888865432    344669998888875


No 48 
>PRK06789 flagellar motor switch protein; Validated
Probab=27.54  E-value=51  Score=22.46  Aligned_cols=39  Identities=8%  Similarity=0.096  Sum_probs=29.4

Q ss_pred             HHhhccCCCCCcCc-ccccccc--ceeeCcccCCCCEEEEec
Q 010334          368 IKETFRLHAPGPFT-PREAREK--CEIRGYTIPAKAKILINL  406 (513)
Q Consensus       368 i~E~lRl~p~~~~~-~R~~~~d--~~l~g~~ip~G~~v~~~~  406 (513)
                      ++|-+.+.+-.-.. -|.+-+.  +.++|..|.+|..|.++-
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~   63 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG   63 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence            68899999876543 6666554  556999999999998754


No 49 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=26.93  E-value=30  Score=22.80  Aligned_cols=15  Identities=27%  Similarity=0.649  Sum_probs=12.6

Q ss_pred             CchHHHHHHhhccCC
Q 010334          361 LDYLKLVIKETFRLH  375 (513)
Q Consensus       361 lp~l~a~i~E~lRl~  375 (513)
                      .-+++.||+|++|+.
T Consensus        40 ~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   40 KQFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            357999999999974


No 50 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=26.00  E-value=1.3e+02  Score=21.35  Aligned_cols=18  Identities=17%  Similarity=0.458  Sum_probs=15.4

Q ss_pred             CchhHHHHHHHHHHHhcC
Q 010334          332 NPRVMKKAQEEVRQACKG  349 (513)
Q Consensus       332 ~p~~~~~l~~Ei~~~~~~  349 (513)
                      .|++.+.+++||-+++..
T Consensus        35 ~p~~l~~lk~eil~VIsK   52 (87)
T PRK13991         35 TPEMMEQMKADLAEVIKR   52 (87)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            599999999999888754


No 51 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=24.27  E-value=1.4e+02  Score=27.17  Aligned_cols=41  Identities=15%  Similarity=0.204  Sum_probs=26.6

Q ss_pred             HHHHHhhccCCCCCcCc----cccccccceee----CcccCCCCEEEEe
Q 010334          365 KLVIKETFRLHAPGPFT----PREAREKCEIR----GYTIPAKAKILIN  405 (513)
Q Consensus       365 ~a~i~E~lRl~p~~~~~----~R~~~~d~~l~----g~~ip~G~~v~~~  405 (513)
                      +.+++.|-.+.||.-.+    .-.++.|..+-    .-+|..||.|.++
T Consensus       276 er~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~  324 (361)
T COG1759         276 ERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG  324 (361)
T ss_pred             HHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC
Confidence            45777888899986433    33456665442    3577888877655


No 52 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=24.02  E-value=70  Score=18.57  Aligned_cols=29  Identities=10%  Similarity=0.303  Sum_probs=17.9

Q ss_pred             CchhHHHHHHHHHHHhcCCCccchhhccCCchHHHHHHhhcc
Q 010334          332 NPRVMKKAQEEVRQACKGKSKIQEADIQKLDYLKLVIKETFR  373 (513)
Q Consensus       332 ~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lR  373 (513)
                      ..|+.+.+|.|++.+-             --.++|+..|--|
T Consensus         9 KqEIL~EvrkEl~K~K-------------~EIIeA~~~eL~r   37 (40)
T PF08776_consen    9 KQEILEEVRKELQKVK-------------EEIIEAIRQELSR   37 (40)
T ss_dssp             HHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhc
Confidence            3567777788877652             2356666666544


No 53 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=23.86  E-value=47  Score=25.30  Aligned_cols=33  Identities=30%  Similarity=0.361  Sum_probs=23.9

Q ss_pred             cccccccceeeCcccCCCCEEEEeccccccCCCCCC
Q 010334          382 PREAREKCEIRGYTIPAKAKILINLHAIGRDPTVWK  417 (513)
Q Consensus       382 ~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~  417 (513)
                      .-++++|.+++|-.||+|+.|...-.   .|+++|.
T Consensus        70 S~I~~~d~~~~g~~i~~GtWv~~~k~---~ddelWe  102 (122)
T PF14550_consen   70 SYIAPEDMEIGGETIPKGTWVVGVKI---TDDELWE  102 (122)
T ss_pred             EEecCCCcccCCeeecceEEEEEEEe---cCHHHHH
Confidence            66778899999999999998854322   2445553


No 54 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=23.56  E-value=2e+02  Score=19.03  Aligned_cols=18  Identities=11%  Similarity=0.379  Sum_probs=7.7

Q ss_pred             HHHHHHHHHHHHHHHhhC
Q 010334           18 VLLSFLLFLLMLIRYWKN   35 (513)
Q Consensus        18 v~~~~~~~~~~~~~~~~~   35 (513)
                      +++++++..+.++-.+.+
T Consensus         8 i~ICVaii~lIlY~iYnr   25 (68)
T PF05961_consen    8 IIICVAIIGLILYGIYNR   25 (68)
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            344444444444444433


No 55 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=23.12  E-value=1.4e+02  Score=20.53  Aligned_cols=8  Identities=0%  Similarity=0.003  Sum_probs=4.1

Q ss_pred             HHHHHHHH
Q 010334           65 HVMTKLCR   72 (513)
Q Consensus        65 ~~~~~~~~   72 (513)
                      +.++.+|+
T Consensus        55 DQVrAlHR   62 (92)
T PHA02681         55 DQVRAFHA   62 (92)
T ss_pred             HHHHHHHH
Confidence            44555554


No 56 
>TIGR00589 ogt O-6-methylguanine DNA methyltransferase. All proteins in this family for which functions are known are involved alkyl-DNA transferases which remove alkyl groups from DNA as part of alkylation DNA repair. Some of the proteins in this family are also transcription regulators and have a distinct transcription regulatory domain. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=22.78  E-value=1.8e+02  Score=20.17  Aligned_cols=60  Identities=7%  Similarity=0.006  Sum_probs=40.9

Q ss_pred             hhHHHHHHHHHHHhcCCCccchhhcc---CCchHHHHHHhhccCCCCCcCc--cccccccceeeCc
Q 010334          334 RVMKKAQEEVRQACKGKSKIQEADIQ---KLDYLKLVIKETFRLHAPGPFT--PREAREKCEIRGY  394 (513)
Q Consensus       334 ~~~~~l~~Ei~~~~~~~~~~~~~~~~---~lp~l~a~i~E~lRl~p~~~~~--~R~~~~d~~l~g~  394 (513)
                      +.|+++.+.+.+ ++.+...||.++.   ..|--...+--+|+-+|....+  .|++..|-.++||
T Consensus         2 ~f~~~V~~~l~~-IP~G~v~TYg~iA~~~g~p~~~RaVg~al~~np~~~~iPcHRVv~s~G~l~~y   66 (80)
T TIGR00589         2 PFQQRVWQALRT-IPYGETKSYGQLAARIGNPKAVRAVGGANGRNPLAILVPCHRVIGKNGSLTGY   66 (80)
T ss_pred             hHHHHHHHHHhC-CCCCCcCCHHHHHHHhCCCChHHHHHHHHHhCCCCCCCCCceeECCCCCCCCC
Confidence            467788888766 3445567887764   3344556667788888764433  8888888888776


No 57 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=22.78  E-value=1.8e+02  Score=22.35  Aligned_cols=39  Identities=23%  Similarity=0.304  Sum_probs=29.2

Q ss_pred             ChHHHHHHHHhcCCcEEEecCCccEEEEcCHHHHHHHHHhc
Q 010334           63 PHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTN  103 (513)
Q Consensus        63 ~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~i~~i~~~~  103 (513)
                      ....+.+|.++||.+--..  +...+...|++..+++....
T Consensus        76 v~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   76 VEQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHhCh
Confidence            4456899999999854432  45577788999999998543


No 58 
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=22.56  E-value=1.3e+02  Score=20.04  Aligned_cols=24  Identities=8%  Similarity=0.124  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHhhCchhHHHHHHH
Q 010334          319 ATSMEWAMSELLKNPRVMKKAQEE  342 (513)
Q Consensus       319 a~~l~~~l~~l~~~p~~~~~l~~E  342 (513)
                      +...+..+--++|+||.+.+++.-
T Consensus        20 G~v~~~a~e~iaRqPE~~~~i~~~   43 (66)
T PRK13467         20 GFLMANLFKSAARQPEMIGQLRSL   43 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHH
Confidence            345667888899999999999875


No 59 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=21.87  E-value=1.4e+02  Score=22.21  Aligned_cols=12  Identities=33%  Similarity=0.368  Sum_probs=8.3

Q ss_pred             CCcccccccccC
Q 010334           48 PLPILGNLHQLA   59 (513)
Q Consensus        48 ~~p~lG~~~~~~   59 (513)
                      .-|+.||+....
T Consensus        45 ~~p~YgNL~~~q   56 (107)
T PF15330_consen   45 DDPCYGNLELQQ   56 (107)
T ss_pred             CCcccccccccc
Confidence            478888876543


No 60 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=21.41  E-value=1.3e+02  Score=21.63  Aligned_cols=27  Identities=19%  Similarity=0.416  Sum_probs=19.8

Q ss_pred             HHHHHHHHHhhCchhHHHHHHHHHHHh
Q 010334          321 SMEWAMSELLKNPRVMKKAQEEVRQAC  347 (513)
Q Consensus       321 ~l~~~l~~l~~~p~~~~~l~~Ei~~~~  347 (513)
                      ++.|-++-.-..||..+.|++||+++-
T Consensus        55 ~lgy~v~tFnDcpeA~~eL~~eI~eAK   81 (91)
T PF08285_consen   55 TLGYGVATFNDCPEAAKELQKEIKEAK   81 (91)
T ss_pred             HHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence            344555555567999999999998873


No 61 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=20.89  E-value=63  Score=22.66  Aligned_cols=21  Identities=24%  Similarity=0.472  Sum_probs=17.6

Q ss_pred             HHHHHHHHHhhhhccccccCC
Q 010334          459 ANIELGLAQLMYHFDWKLANG  479 (513)
Q Consensus       459 ~~~~~~l~~ll~~f~~~~~~~  479 (513)
                      .-|+-++..+|+-|||.|.+.
T Consensus        60 ~~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             HHHHHHHHHHhccCCceeeec
Confidence            347889999999999999754


No 62 
>PF15050 SCIMP:  SCIMP protein
Probab=20.85  E-value=2.2e+02  Score=21.45  Aligned_cols=15  Identities=27%  Similarity=0.375  Sum_probs=8.4

Q ss_pred             CCCCCCC-CCcccccc
Q 010334           41 KQPPGPK-PLPILGNL   55 (513)
Q Consensus        41 ~~~PgP~-~~p~lG~~   55 (513)
                      ..||.|+ +.+..|+.
T Consensus        68 ~LPpLPPRg~~s~~~~   83 (133)
T PF15050_consen   68 QLPPLPPRGSPSPEDS   83 (133)
T ss_pred             CCCCCCCCCCCCcccc
Confidence            4566554 46666654


No 63 
>PF10264 Stork_head:  Winged helix Storkhead-box1 domain;  InterPro: IPR019391 In humans the Storkhead-box protein controls polyploidization of extravillus trophoblast and is implicated in pre-eclampsia []. This entry represents the conserved N-terminal winged-helix domain, which is likely to bind DNA.
Probab=20.79  E-value=2.8e+02  Score=19.30  Aligned_cols=39  Identities=18%  Similarity=0.331  Sum_probs=27.5

Q ss_pred             HHHHHHHHHHHhhC--chhHHHHHHHHHHHhcCCCccchhh
Q 010334          319 ATSMEWAMSELLKN--PRVMKKAQEEVRQACKGKSKIQEAD  357 (513)
Q Consensus       319 a~~l~~~l~~l~~~--p~~~~~l~~Ei~~~~~~~~~~~~~~  357 (513)
                      +-+|+|++..|-..  +-.++.|++.+.+.+.+-..++.|.
T Consensus        13 ~EvlC~~I~dln~~~~~at~E~l~~~L~~~yp~i~~Ps~e~   53 (80)
T PF10264_consen   13 PEVLCWVISDLNAAGQPATQETLREHLRKHYPGIAIPSQEV   53 (80)
T ss_pred             HHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCCCCHHH
Confidence            44577777777764  6688999999998877654454443


No 64 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=20.56  E-value=53  Score=27.72  Aligned_cols=25  Identities=32%  Similarity=0.523  Sum_probs=20.1

Q ss_pred             EEEecccc-ccCCCCCCCCCCCCCCc
Q 010334          402 ILINLHAI-GRDPTVWKDPECFRPER  426 (513)
Q Consensus       402 v~~~~~~~-~~d~~~~~~p~~F~P~R  426 (513)
                      +-++-+.- +-|+.+|.|...|+|.|
T Consensus       186 LGiPGW~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  186 LGIPGWWPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             cCCCCCCCCCCCcccccCccccCCCC
Confidence            33455555 88999999999999988


No 65 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=20.13  E-value=1.1e+02  Score=18.11  Aligned_cols=20  Identities=15%  Similarity=0.198  Sum_probs=15.4

Q ss_pred             HHHHHHHHhhCchhHHHHHH
Q 010334          322 MEWAMSELLKNPRVMKKAQE  341 (513)
Q Consensus       322 l~~~l~~l~~~p~~~~~l~~  341 (513)
                      -.|-+..++++||+|.-|.=
T Consensus        12 gl~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   12 GLFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             CHHHHHHHHcCHHHHHHHHH
Confidence            34667778899999987754


Done!