BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010337
(513 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 194/441 (43%), Gaps = 51/441 (11%)
Query: 85 TVTCHPKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNS------DGETWLIQRKTAA 138
+ P++++ L + Y K +A + G+ +F + E W QR+
Sbjct: 37 VIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQRRVID 94
Query: 139 LEFTTRTLRQAMARWVNRTIKNRLWRILDQAAEQNFPVDLQDLLLRLTFDNICGLTFGKD 198
L F+ +L M + + +L IL+ A+ PV +QD+L D + FG +
Sbjct: 95 LAFSRSSLVSLMETFNEKA--EQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGME 152
Query: 199 PETLSPELPENPFSIAFD------TATEATLQRLLYPGFLWRLEKIFGIGAEKRLKKSLE 252
L + P S A TA+ TL + L PG +L ++ + ++ +
Sbjct: 153 TSMLLG--AQKPLSQAVKLMLEGITASRNTLAKFL-PGKRKQLREV-----RESIRFLRQ 204
Query: 253 VVESYMDGAIEA--RKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSV 310
V ++ EA R E D+L++ +K + G +L + F +AG +TS+
Sbjct: 205 VGRDWVQRRREALKRGEEVPADILTQILKAEE--GAQDDEGLLDNF-VTFFIAGHETSAN 261
Query: 311 ALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAE 370
L++ + P + ++ E+ V+ R L+F++ +L YL L E
Sbjct: 262 HLAFTVMELSRQPEIVARLQAEVDEVIGSKRY----------LDFEDLGRLQYLSQVLKE 311
Query: 371 TLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWL 430
+LRLYP F+ ++ ++ L DG VP + + +S Y +GRM T + ED L F P
Sbjct: 312 SLRLYPPAWGTFR-LLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYF-EDPLTFNP---- 365
Query: 431 SAEGDRFEP--PKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLVPGHRVE 488
DRF P PK + + F+ G R+C+G+ A +++K + +L R LVPG R
Sbjct: 366 ----DRFGPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFG 421
Query: 489 QKMSLTLFMKHGLRVFLHPRN 509
+ TL + L PR
Sbjct: 422 LQEQATLKPLDPVLCTLRPRG 442
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 178/384 (46%), Gaps = 40/384 (10%)
Query: 125 SDGETWLIQRKTAALEFTTRTLRQA---MARWVNRTIKNRLWRILDQAAEQNFPVDLQDL 181
++ E W R + FT+ L++ +A++ + ++N L + AE PV L+D+
Sbjct: 101 AEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRN-----LRREAETGKPVTLKDV 155
Query: 182 LLRLTFDNICGLTFGKDPETLSPELPENPFS------IAFDTATEATLQRLLYPGFLWRL 235
+ D I +FG + ++L+ P++PF + FD L ++P FL +
Sbjct: 156 FGAYSMDVITSTSFGVNIDSLNN--PQDPFVENTKKLLRFDFLDPFFLSITVFP-FLIPI 212
Query: 236 EKIFGIGAEKR-----LKKSLE-VVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFP 289
++ I R L+KS++ + ES ++ + R + + S+ K+ + L
Sbjct: 213 LEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSD 272
Query: 290 SAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWM 349
++ + ++ F+ AG +T+S LS+ + + HP V+QK+ +EI VL
Sbjct: 273 LELVAQ-SIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN---------- 321
Query: 350 EEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYS 409
+ P +D ++ YL + ETLRL+P + + V DV +G F+P G V Y+
Sbjct: 322 KAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYA 380
Query: 410 VGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSA 469
+ R W E +F PER+ D +P Y + F +GPR C+G A + MK A
Sbjct: 381 LHRDPKYWTEP-EKFLPERFSKKNKDNIDP----YIYTPFGSGPRNCIGMRFALMNMKLA 435
Query: 470 ASAVLLRYRLSLVPGHRVEQKMSL 493
VL + ++ K+SL
Sbjct: 436 LIRVLQNFSFKPCKETQIPLKLSL 459
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 178/384 (46%), Gaps = 40/384 (10%)
Query: 125 SDGETWLIQRKTAALEFTTRTLRQA---MARWVNRTIKNRLWRILDQAAEQNFPVDLQDL 181
++ E W R + FT+ L++ +A++ + ++N L + AE PV L+D+
Sbjct: 99 AEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRN-----LRREAETGKPVTLKDV 153
Query: 182 LLRLTFDNICGLTFGKDPETLSPELPENPFS------IAFDTATEATLQRLLYPGFLWRL 235
+ D I +FG + ++L+ P++PF + FD L ++P FL +
Sbjct: 154 FGAYSMDVITSTSFGVNIDSLNN--PQDPFVENTKKLLRFDFLDPFFLSITVFP-FLIPI 210
Query: 236 EKIFGIGAEKR-----LKKSLE-VVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFP 289
++ I R L+KS++ + ES ++ + R + + S+ K+ + L
Sbjct: 211 LEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSD 270
Query: 290 SAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWM 349
++ + ++ F+ AG +T+S LS+ + + HP V+QK+ +EI VL
Sbjct: 271 LELVAQ-SIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN---------- 319
Query: 350 EEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYS 409
+ P +D ++ YL + ETLRL+P + + V DV +G F+P G V Y+
Sbjct: 320 KAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYA 378
Query: 410 VGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSA 469
+ R W E +F PER+ D +P Y + F +GPR C+G A + MK A
Sbjct: 379 LHRDPKYWTEP-EKFLPERFSKKNKDNIDP----YIYTPFGSGPRNCIGMRFALMNMKLA 433
Query: 470 ASAVLLRYRLSLVPGHRVEQKMSL 493
VL + ++ K+SL
Sbjct: 434 LIRVLQNFSFKPCKETQIPLKLSL 457
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 178/384 (46%), Gaps = 40/384 (10%)
Query: 125 SDGETWLIQRKTAALEFTTRTLRQA---MARWVNRTIKNRLWRILDQAAEQNFPVDLQDL 181
++ E W R + FT+ L++ +A++ + ++N L + AE PV L+D+
Sbjct: 100 AEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRN-----LRREAETGKPVTLKDV 154
Query: 182 LLRLTFDNICGLTFGKDPETLSPELPENPFS------IAFDTATEATLQRLLYPGFLWRL 235
+ D I +FG + ++L+ P++PF + FD L ++P FL +
Sbjct: 155 FGAYSMDVITSTSFGVNIDSLNN--PQDPFVENTKKLLRFDFLDPFFLSITVFP-FLIPI 211
Query: 236 EKIFGIGAEKR-----LKKSLE-VVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFP 289
++ I R L+KS++ + ES ++ + R + + S+ K+ + L
Sbjct: 212 LEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSD 271
Query: 290 SAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWM 349
++ + ++ F+ AG +T+S LS+ + + HP V+QK+ +EI VL
Sbjct: 272 LELVAQ-SIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN---------- 320
Query: 350 EEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYS 409
+ P +D ++ YL + ETLRL+P + + V DV +G F+P G V Y+
Sbjct: 321 KAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYA 379
Query: 410 VGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSA 469
+ R W E +F PER+ D +P Y + F +GPR C+G A + MK A
Sbjct: 380 LHRDPKYWTEP-EKFLPERFSKKNKDNIDP----YIYTPFGSGPRNCIGMRFALMNMKLA 434
Query: 470 ASAVLLRYRLSLVPGHRVEQKMSL 493
VL + ++ K+SL
Sbjct: 435 LIRVLQNFSFKPCKETQIPLKLSL 458
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 169/395 (42%), Gaps = 50/395 (12%)
Query: 116 DLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQAAEQ 172
D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 80 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEYI 139
Query: 173 NFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRLLY-- 228
P D+ RLT D I CG + + + + P +PF I+ A + + +L
Sbjct: 140 EVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFIISMIRALDEVMNKLQRAN 192
Query: 229 ---PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMKKRDV 283
P + +++ ++ ++V+ +D I RK S SDDLL++ + +D
Sbjct: 193 PDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTQMLNGKDP 243
Query: 284 D-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRG 342
+ G + + F++AG +T+S LS+ + ++ +P V QK+ +E + VL +
Sbjct: 244 ETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDPVP 303
Query: 343 SNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGST 402
S + + +L Y+ L E LRL+P+ P Y D VL + G
Sbjct: 304 S-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 403 VTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTCLGKD 460
V I + R KTIWG+D EF+PE RFE P + F F G R C+G+
Sbjct: 353 VMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRACIGQQ 404
Query: 461 LAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
A + +L + + ++ K +LTL
Sbjct: 405 FALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 169/399 (42%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 79 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 138
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 139 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 191
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 192 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 242
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 243 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 302
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+VP Y D VL +
Sbjct: 303 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLE 351
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 352 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 403
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 404 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 442
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 168/399 (42%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+GK A + +L + + ++ K +LTL
Sbjct: 401 IGKQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 168/399 (42%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFFGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDMT----RLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 168/399 (42%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 82 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 141
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 142 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 194
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 195 QRTNPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLH 245
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 246 GKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLV 305
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 306 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 354
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 355 KGDEIMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 406
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 407 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 445
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 168/399 (42%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDMT----RLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 168/399 (42%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 168/399 (42%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 79 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 138
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 139 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 191
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 192 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 242
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 243 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 302
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 303 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 351
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 352 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 403
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 404 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 442
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 168/399 (42%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 77 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 136
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 137 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 189
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 190 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 240
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 241 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 300
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 301 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 349
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 350 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 401
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 402 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 168/399 (42%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 168/399 (42%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 168/399 (42%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 77 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 136
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 137 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 189
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 190 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 240
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 241 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 300
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 301 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLE 349
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 350 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 401
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 402 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 165/397 (41%), Gaps = 46/397 (11%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 77 KFVRDFAGDGLFTSWTHEKNWCKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 136
Query: 169 AAEQNFPVDLQDLLLRLTFDNICGLTFGKDPETLSPELPENPFSIAFDTATEATLQRLLY 228
P D+ RLT D I F + + P +PF + A + + +L
Sbjct: 137 DEHIEVPEDMT----RLTLDTIGLSGFNYRFNSFYRDQP-HPFITSMVRALDEAMNKLQR 191
Query: 229 -----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMKKR 281
P + +++ ++ ++V+ +D I RK S SDDLL+ + +
Sbjct: 192 ANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGK 242
Query: 282 DVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKET 340
D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL +
Sbjct: 243 DPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP 302
Query: 341 RGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAG 400
S + + +L Y+ L E LRL+P+ P Y D VL + G
Sbjct: 303 VPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKG 351
Query: 401 STVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTCLG 458
+ I + R KTIWG+D EF+PE RFE P + F F G R C+G
Sbjct: 352 DELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRACIG 403
Query: 459 KDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+ A + +L + + ++ K +LTL
Sbjct: 404 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 168/399 (42%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 79 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 138
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 139 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 191
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 192 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 242
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 243 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 302
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 303 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLE 351
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 352 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 403
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 404 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 442
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 24/288 (8%)
Query: 211 FSIAFDTATEATLQRLLYP-GFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES- 268
+A T +R++ P G L+RL + A +R +L + +D I R+ S
Sbjct: 183 LCVALATVFRGMYRRMVVPLGPLYRLP----LPANRRFNDALADLHLLVDEIIAERRASG 238
Query: 269 -PSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQ 327
DDLL+ ++ +D +G+ + + + G +T + + W + +HP
Sbjct: 239 QKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHAD 298
Query: 328 KIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVS 387
+I DE+ V T G P+ F++ KL + + E +RL P+V + V+
Sbjct: 299 RIRDEVEAV---TGG--------RPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVA 347
Query: 388 DDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFV 447
+ L G +PAG+ + YS Y++ R + +D LEF P+RWL PK Y
Sbjct: 348 ESEL-GGYRIPAGADIIYSPYAIQRDPKSY-DDNLEFDPDRWLPERAANV--PK--YAMK 401
Query: 448 AFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
F+AG R C + Q+ +A+ +YR V G ++ +TL
Sbjct: 402 PFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAVRVGITL 449
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 168/399 (42%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F + G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPYGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 167/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++ G +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 167/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG + +S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 167/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG + +S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 167/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 77 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 136
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 137 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 189
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 190 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 240
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 241 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 300
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 301 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 349
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 350 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 401
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
G+ A + +L + + ++ K +LTL
Sbjct: 402 PGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 167/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGEFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 167/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++ G +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 167/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG + +S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 167/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
G+ A + +L + + ++ K +LTL
Sbjct: 401 EGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 167/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++ G +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 167/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++ G +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 167/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++ G +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 167/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++ G +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 168/399 (42%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDMT----RLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAY---------DENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F + G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPWGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 24/257 (9%)
Query: 244 EKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMKKRDVD-GNLFPSAVLQRIALNF 300
+++ ++ ++V+ +D I RK S SDDLL+ + +D + G ++ + F
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF 261
Query: 301 VLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADK 360
++AG +T+S LS+ + ++ +P V QK +E + VL + S + + +
Sbjct: 262 LIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS-----------YKQVKQ 310
Query: 361 LIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGED 420
L Y+ L E LRL+P+ P Y D VL + G + I + R KTIWG+D
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 421 CLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYR 478
EF+PE RFE P + F F G R C+G+ A + +L +
Sbjct: 371 VEEFRPE--------RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 479 LSLVPGHRVEQKMSLTL 495
+ ++ K +LTL
Sbjct: 423 FEDHTNYELDIKETLTL 439
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 167/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPHGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 167/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPAGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 167/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + ++AG +T+S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +LTL
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 24/257 (9%)
Query: 244 EKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMKKRDVD-GNLFPSAVLQRIALNF 300
+++ ++ ++V+ +D I RK S SDDLL+ + +D + G ++ + F
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITF 261
Query: 301 VLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADK 360
++AG + +S LS+ + ++ +P V QK +E + VL + S + + +
Sbjct: 262 LIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS-----------YKQVKQ 310
Query: 361 LIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGED 420
L Y+ L E LRL+P+ P Y D VL + G + I + R KTIWG+D
Sbjct: 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370
Query: 421 CLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYR 478
EF+PE RFE P + F F G R C+G+ A + +L +
Sbjct: 371 VEEFRPE--------RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 479 LSLVPGHRVEQKMSLTL 495
+ ++ K +LTL
Sbjct: 423 FEDHTNYELDIKETLTL 439
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 18/251 (7%)
Query: 258 MDGAIEARKESP--SDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWF 315
++ I+AR++ P +D L + RD + L+ L + AG +T + ALS F
Sbjct: 207 LEKIIKARQQQPPSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSF 266
Query: 316 FWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLY 375
L+ H + +++ R K + + L + K+ YL L E LRL
Sbjct: 267 CLLLGQHSDIRERV-----------RQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLI 315
Query: 376 PSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGD 435
P V F+ ++ D G P G V+Y I ++ D +F PER+
Sbjct: 316 PPVGGGFRELIQDCQF-QGFHFPKGWLVSYQISQTHADPDLY-PDPEKFDPERFTPDGSA 373
Query: 436 RFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
PP + V F G R CLGK+ A L+MK A+ ++ ++ +L+PG +E ++ +
Sbjct: 374 THNPP---FAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSP 430
Query: 496 FMKHGLRVFLH 506
K LRV LH
Sbjct: 431 RPKDNLRVKLH 441
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 173/413 (41%), Gaps = 54/413 (13%)
Query: 99 TRFE-NYPKGPTWQKAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVN 155
+RF+ N + P K DL G G+F S + W F+ + ++ A V+
Sbjct: 66 SRFDKNLSQAP---KFVRDLAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVD 122
Query: 156 RTIK-NRLWRILDQAAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFS 212
++ + W L+ P D+ RLT D I CG + + + + P +PF
Sbjct: 123 IAVQLVQKWERLNADEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFI 175
Query: 213 IAFDTATEATLQRLLY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKE 267
+ A + + +L P + +++ ++ ++V+ +D I RK
Sbjct: 176 TSMVRALDEAMNKLRRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKA 226
Query: 268 S--PSDDLLSRFMKKRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPC 324
S SDDLL+ + +D + G ++ + F+ AG + +S LS+ + ++ +P
Sbjct: 227 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPH 286
Query: 325 VEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKY 384
QK +E + VL + S+ + +L Y+ L E LRL+P+ P Y
Sbjct: 287 ELQKAAEEAARVLVDPVPSH-----------KQVKQLKYVGMVLNEALRLWPTAPAFSLY 335
Query: 385 VVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--D 442
D VL + G + I + R KT+WG+D EF+PE RFE P
Sbjct: 336 AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPE--------RFENPSAIP 387
Query: 443 GYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+ F F G R C+G+ A + +L + + ++ K +LTL
Sbjct: 388 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 155/366 (42%), Gaps = 50/366 (13%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+ S + W F+ + ++ A V+ ++ + W L+
Sbjct: 77 KFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 136
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 137 DEHIEVPEDMT----RLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 189
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 190 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 240
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +++S LS+ + ++ +P V QK +E + VL
Sbjct: 241 GKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 300
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 301 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 349
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 350 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 401
Query: 457 LGKDLA 462
+G+ A
Sbjct: 402 IGQQFA 407
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 155/366 (42%), Gaps = 50/366 (13%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+ S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +++S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLA 462
+G+ A
Sbjct: 401 IGQQFA 406
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 172/414 (41%), Gaps = 54/414 (13%)
Query: 98 RTRFE-NYPKGPTWQKAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWV 154
+RF+ N + P K D G G+F S + W F+ + ++ A V
Sbjct: 64 ESRFDKNLSQAP---KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMV 120
Query: 155 NRTIK-NRLWRILDQAAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPF 211
+ ++ + W L+ P D+ RLT D I CG + + + + P +PF
Sbjct: 121 DIAVQLVQKWERLNADEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPF 173
Query: 212 SIAFDTATEATLQRLLY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARK 266
+ A + + +L P + +++ ++ ++V+ +D I RK
Sbjct: 174 ITSMVRALDEAMNKLRRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRK 224
Query: 267 ES--PSDDLLSRFMKKRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHP 323
S SDDLL+ + +D + G ++ + F+ AG + +S LS+ + ++ +P
Sbjct: 225 ASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNP 284
Query: 324 CVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFK 383
QK +E + VL + S + + +L Y+ L E LRL+P+ P
Sbjct: 285 HELQKAAEEAARVLVDPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 384 YVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK-- 441
Y D VL + G + I + R KTIWG+D EF+PE RFE P
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAI 385
Query: 442 DGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+ F F G R C+G+ A + +L + + ++ K +LTL
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 155/366 (42%), Gaps = 50/366 (13%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+ S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDMT----RLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F++AG +++S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLA 462
+G+ A
Sbjct: 401 IGQQFA 406
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 165/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 76 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 135
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 136 DEHIEVPEDM----TRLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 188
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 189 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 239
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F+ AG + +S LS+ + ++ +P V QK +E + VL
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 300 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLE 348
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 400
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +L L
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLVL 439
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 165/399 (41%), Gaps = 50/399 (12%)
Query: 112 KAFHDLLGQGIFNS--DGETWLIQRKTAALEFTTRTLRQAMARWVNRTIK-NRLWRILDQ 168
K D G G+F S + W F+ + ++ A V+ ++ + W L+
Sbjct: 77 KFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNA 136
Query: 169 AAEQNFPVDLQDLLLRLTFDNI--CGLTFGKDPETLSPELPENPFSIAFDTATEATLQRL 226
P D+ RLT D I CG + + + + P +PF + A + + +L
Sbjct: 137 DEHIEVPEDMT----RLTLDTIGLCGFNYRFN--SFYRDQP-HPFITSMVRALDEAMNKL 189
Query: 227 LY-----PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMK 279
P + +++ ++ ++V+ +D I RK S SDDLL+ +
Sbjct: 190 QRANPDDPAYDEN---------KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLN 240
Query: 280 KRDVD-GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLK 338
+D + G ++ + F+ AG + +S LS+ + ++ +P V QK +E + VL
Sbjct: 241 GKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLV 300
Query: 339 ETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVP 398
+ S + + +L Y+ L E LRL+P+ P Y D VL +
Sbjct: 301 DPVPS-----------YKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLE 349
Query: 399 AGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTC 456
G + I + R KTIWG+D EF+PE RFE P + F F G R C
Sbjct: 350 KGDELMVLIPQLHRDKTIWGDDVEEFRPE--------RFENPSAIPQHAFKPFGNGQRAC 401
Query: 457 LGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTL 495
+G+ A + +L + + ++ K +L L
Sbjct: 402 IGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLVL 440
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 27/270 (10%)
Query: 231 FLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPS 290
FLW L+K V E Y D + ++ + L K GNL P
Sbjct: 236 FLWFLQKT--------------VQEHYQDFDKNSVRDI-TGALFKHSKKGPRASGNLIPQ 280
Query: 291 AVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWME 350
+ + + AG DT + A+SW ++ P +++KI E+ TV+ R +
Sbjct: 281 EKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRL----- 335
Query: 351 EPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSV 410
+ +L YL+A + ET R +P + + D +G ++P V + + V
Sbjct: 336 -----SDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQV 390
Query: 411 GRMKTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAA 470
+W ED EF+PER+L+A+G P K + F G R C+G+ LA ++
Sbjct: 391 NHDPELW-EDPSEFRPERFLTADGTAINKPL-SEKMMLFGMGKRRCIGEVLAKWEIFLFL 448
Query: 471 SAVLLRYRLSLVPGHRVEQKMSLTLFMKHG 500
+ +L + S+ PG +V+ L MKH
Sbjct: 449 AILLQQLEFSVPPGVKVDLTPIYGLTMKHA 478
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 119/257 (46%), Gaps = 24/257 (9%)
Query: 244 EKRLKKSLEVVESYMDGAIEARKES--PSDDLLSRFMKKRDVD-GNLFPSAVLQRIALNF 300
+++ ++ ++V+ +D I RK S SDDLL+ + +D + G ++ + F
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIITF 262
Query: 301 VLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADK 360
++AG +T+S L++ + ++ +P V QK +E + VL + S + + +
Sbjct: 263 LIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDPVPS-----------YKQVKQ 311
Query: 361 LIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGED 420
L Y+ L E LR++P+ P Y D +L + G + I + R KT+WG+D
Sbjct: 312 LKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDD 371
Query: 421 CLEFKPERWLSAEGDRFEPPK--DGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYR 478
EF+PE RFE P + F F G R C+G+ A + +L +
Sbjct: 372 VEEFRPE--------RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
Query: 479 LSLVPGHRVEQKMSLTL 495
+ ++ + +LTL
Sbjct: 424 FEDHTNYELDIEETLTL 440
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 135/296 (45%), Gaps = 33/296 (11%)
Query: 211 FSIAFDTATEATLQRLLYPGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEA----RK 266
FS + A A++ LY F W I G ++L ++ VV ++ IE RK
Sbjct: 188 FSENVELAASASV--FLYNAFPWI--GILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRK 243
Query: 267 ESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNF-----VLAGRDTSSVALSWFFWLIMN 321
+ ++ + D G PS+ + L F ++AG +T++ L W +
Sbjct: 244 PQLPQHFVDAYLDEMD-QGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMAL 302
Query: 322 HPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPED 381
+P ++ ++ EI ++ G N K +D+ K+ Y +A L E LR VP
Sbjct: 303 YPNIQGQVQKEIDLIM----GPNGKP------SWDDKCKMPYTEAVLHEVLRFCNIVPLG 352
Query: 382 FKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK 441
+ S+D + G +P G+TV ++YSV + W D F PER+L + G + K
Sbjct: 353 IFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW-RDPEVFHPERFLDSSG--YFAKK 409
Query: 442 DGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRL----SLVPGHRVEQKMSL 493
+ V F+ G R CLG+ LA ++M +A+L R+ L LVP + M+L
Sbjct: 410 EA--LVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTL 463
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 135/296 (45%), Gaps = 33/296 (11%)
Query: 211 FSIAFDTATEATLQRLLYPGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEA----RK 266
FS + A A++ LY F W I G ++L ++ VV ++ IE RK
Sbjct: 188 FSENVELAASASV--FLYNAFPWI--GILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRK 243
Query: 267 ESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNF-----VLAGRDTSSVALSWFFWLIMN 321
+ ++ + D G PS+ + L F ++AG +T++ L W +
Sbjct: 244 PQLPQHFVDAYLDEMD-QGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMAL 302
Query: 322 HPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPED 381
+P ++ ++ EI ++ G N K +D+ K+ Y +A L E LR VP
Sbjct: 303 YPNIQGQVQKEIDLIM----GPNGKP------SWDDKCKMPYTEAVLHEVLRFCNIVPLG 352
Query: 382 FKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPK 441
+ S+D + G +P G+TV ++YSV + W D F PER+L + G + K
Sbjct: 353 IFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW-RDPEVFHPERFLDSSG--YFAKK 409
Query: 442 DGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRL----SLVPGHRVEQKMSL 493
+ V F+ G R CLG+ LA ++M +A+L R+ L LVP + M+L
Sbjct: 410 EA--LVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTL 463
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 202/494 (40%), Gaps = 50/494 (10%)
Query: 28 LTGLKVYPFVGSL-PILIKNR-KRLHDWIASNLRATGGS-----ATYQTTTVALPYLATK 80
L G +P +GSL I K K+ HD +A + G ++ + + P L +
Sbjct: 26 LPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSL-LE 84
Query: 81 QGFYTVTCHPKNIEHILRTRFENYPKGPTWQKAFHDLLGQ--GIFNSDGETWLIQRKTAA 138
+ T + HP+ R E P W KA+ D + G+ +G+ W R
Sbjct: 85 ALYRTESAHPQ--------RLEIKP----W-KAYRDHRNEAYGLMILEGQEWQRVRSAFQ 131
Query: 139 LEFTTRTLRQAMARWVNRTIKNRLWRILDQAAEQNFPVDLQDLLLRLTFDNICGLTFGKD 198
+ + + +N + + L R+ + E+ DL L + +F++IC + + K
Sbjct: 132 KKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKR 191
Query: 199 PETLSPELPENP--FSIAFDTATEATLQRLLYPGFLW-RLEKIFGIGAEKRLKKSLEVVE 255
L E E F A T + ++ P L RL + V+
Sbjct: 192 FGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVK 251
Query: 256 SYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWF 315
+D ++ + P D L ++ + +AV + LA +T++ +L W
Sbjct: 252 PCIDNRLQRYSQQPGADFLCDIYQQDHLSKKELYAAVTE-----LQLAAVETTANSLMWI 306
Query: 316 FWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLY 375
+ + +P +++++ E+ +VL + + + P YLKA L E++RL
Sbjct: 307 LYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMP----------YLKACLKESMRLT 356
Query: 376 PSVPEDFKYVVSDDVLPDGTF-VPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEG 434
PSVP + + VL G + +P G+ +T + +G + + ED +F+PERWL E
Sbjct: 357 PSVPFTTRTLDKPTVL--GEYALPKGTVLTLNTQVLGSSEDNF-EDSHKFRPERWLQKE- 412
Query: 435 DRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLT 494
+ P + + F G R C+G+ LA LQ+ A ++ +Y + VE
Sbjct: 413 KKINP----FAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEMLHLGI 468
Query: 495 LFMKHGLRVFLHPR 508
L L + PR
Sbjct: 469 LVPSRELPIAFRPR 482
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 182/409 (44%), Gaps = 66/409 (16%)
Query: 122 IFNSDGETWLIQRKTAALEFTTRTLRQAMARWVN---RTIKNRLWRILDQAAEQNFPVDL 178
IFN++ E W KT F + R V ++K L R+ + E + VD+
Sbjct: 133 IFNNNPELW----KTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGY-VDV 187
Query: 179 QDLLLRLTFDNICGLTFGKDPETLSPELPENPFSIAFDTATEATLQRLLYPGFLWRLEKI 238
LL R+ D L F + P L E+ + +A L+ P +++ +
Sbjct: 188 LTLLRRVMLDTSNTL-FLRIP------LDESAIVVKIQGYFDAWQALLIKPDIFFKISWL 240
Query: 239 FGIGAEKRLKKSLEVVESYMDGAI-EARKESPSDDLLSRFM---------KKRDVDGNLF 288
+ K+ +KS++ ++ ++ I E R+ +++ L M +KR G+L
Sbjct: 241 Y-----KKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKR---GDLT 292
Query: 289 PSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKW 348
V Q I L ++A DT SV+L + +LI HP VE+ I+ EI TV+
Sbjct: 293 RENVNQCI-LEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG---------- 341
Query: 349 MEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIY 408
E ++ D+ KL ++ + E++R P V + + DDV+ DG V G+ + I
Sbjct: 342 -ERDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVI-DGYPVKKGTNI---IL 396
Query: 409 SVGRMKTIWGEDCLEF--KPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQM 466
++GRM LEF KP + + P + F F GPR C GK +A + M
Sbjct: 397 NIGRMHR------LEFFPKPNEFTLENFAKNVPYR---YFQPFGFGPRGCAGKYIAMVMM 447
Query: 467 KSAASAVLLRYRLSLVPGHRVE--QKM-SLTLF---MKHGLRVFLHPRN 509
K+ +L R+ + + G VE QK+ L+L K+ L + PRN
Sbjct: 448 KAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPRN 496
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 116/258 (44%), Gaps = 23/258 (8%)
Query: 233 WRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKESPS--DDLLSRFMKKRDVDGNLFPS 290
W L + + +R ++ ++ AI+ R++S DD+L + DG
Sbjct: 191 WLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDILQTLLDATYKDGRPLTD 250
Query: 291 AVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWME 350
+ + + +LAG+ TSS +W + + +++K E TV G N+
Sbjct: 251 DEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVC----GENLP---- 302
Query: 351 EPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSV 410
PL +D+ L L + ETLRL P + + + + G +P G V S
Sbjct: 303 -PLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVA-GYTIPPGHQVCVSPTVN 360
Query: 411 GRMKTIWGEDCLEFKPERWLS---AEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMK 467
R+K W E L+F P+R+L A G++F +V F AG C+G++ AY+Q+K
Sbjct: 361 QRLKDSWVER-LDFNPDRYLQDNPASGEKF-------AYVPFGAGRHRCIGENFAYVQIK 412
Query: 468 SAASAVLLRYRLSLVPGH 485
+ S +L Y L+ G+
Sbjct: 413 TIWSTMLRLYEFDLIDGY 430
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 144/330 (43%), Gaps = 35/330 (10%)
Query: 147 RQAMARWVNRTIKNRLWRILDQAAEQNFPVDLQDLLLRLTFDNICGLTFGKDPETLSPEL 206
R +M WV++ + R+ QA PV +Q LT IC LTFG +TL
Sbjct: 133 RSSMEPWVDQLTQEFCERMRVQAGA---PVTIQKEFSLLTCSIICYLTFGNKEDTLVHAF 189
Query: 207 PENPFSIAFDTATEATLQRLLYPGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARK 266
+ T ++Q L FL + F RLK+++E + ++ + K
Sbjct: 190 -HDCVQDLMKTWDHWSIQILDMVPFL----RFFPNPGLWRLKQAIENRDHMVEKQLRRHK 244
Query: 267 ESP--------SDDLLSRFMKKR--DVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFF 316
ES +D +L ++R + G L V + ++ + G +T++ LSW
Sbjct: 245 ESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSV-VDLFIGGTETTASTLSWAV 303
Query: 317 WLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYP 376
+++HP +++++ +E+ L G++ + + + + +L L A +AE LRL P
Sbjct: 304 AFLLHHPEIQRRLQEELDRELGP--GASCSR-----VTYKDRARLPLLNATIAEVLRLRP 356
Query: 377 SVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDR 436
VP + + G +P G V ++ +T+W E EF+P DR
Sbjct: 357 VVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVW-EQPHEFRP--------DR 407
Query: 437 FEPPKDGYKFVAFNAGPRTCLGKDLAYLQM 466
F P +AF G R CLG+ LA L++
Sbjct: 408 FLEPGANPSALAFGCGARVCLGESLARLEL 437
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 158/376 (42%), Gaps = 39/376 (10%)
Query: 119 GQGIFNSDGETWLIQRKTAALEFTTRTLRQ-AMA-RWVNRTIKNRLWRILDQAAEQNFP- 175
G G+ ++G W + R+ F+ T+R M R V I+ ++++ +
Sbjct: 91 GYGVIFANGNRWKVLRR-----FSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGAL 145
Query: 176 VDLQDLLLRLTFDNICGLTFGKDPETLSPELPE--NPFSIAFDTATEATLQRL-LYPGFL 232
+D L +T + IC + FGK E + N F F + Q L+ GFL
Sbjct: 146 MDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFL 205
Query: 233 WRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PS------DDLLSRFMKKRDVD 284
GA +++ K+L+ + +Y+ ++E +E+ PS D L K++
Sbjct: 206 KHFP-----GAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNA 260
Query: 285 GNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSN 344
+ F L L+ AG +T+S L + F L++ +P V +++ EI V+ R
Sbjct: 261 HSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHR--- 317
Query: 345 VKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVT 404
P E + K+ Y +A + E R +P ++V+ G +P + V
Sbjct: 318 -------PPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEV- 369
Query: 405 YSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYL 464
+ I S + E F P+ +L A G K F+ F+ G R CLG+ +A
Sbjct: 370 FLILSTALHDPHYFEKPDAFNPDHFLDANGAL----KKTEAFIPFSLGKRICLGEGIARA 425
Query: 465 QMKSAASAVLLRYRLS 480
++ + +L + ++
Sbjct: 426 ELFLFFTTILQNFSMA 441
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 19/221 (8%)
Query: 268 SPSDDLLSRFMKKRD-VDGN---LFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHP 323
P DL F+ + + GN F L+ + + AG T+S L+W L++ HP
Sbjct: 244 QPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHP 303
Query: 324 CVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFK 383
V++++ EI V+ + R E + + Y A + E R VP
Sbjct: 304 DVQRRVQQEIDDVIGQVRRP----------EMGDQAHMPYTTAVIHEVQRFGDIVPLGMT 353
Query: 384 YVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKDG 443
++ S D+ G +P G+T+ ++ SV + + +W E F PE +L A+G +P
Sbjct: 354 HMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW-EKPFRFHPEHFLDAQGHFVKP---- 408
Query: 444 YKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLVPG 484
F+ F+AG R CLG+ LA +++ +++L + S+ G
Sbjct: 409 EAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 449
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 19/221 (8%)
Query: 268 SPSDDLLSRFMKKRD-VDGN---LFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHP 323
P DL F+ + + GN F L+ + + AG T+S L+W L++ HP
Sbjct: 244 QPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHP 303
Query: 324 CVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFK 383
V++++ EI V+ + R E + + Y A + E R VP
Sbjct: 304 DVQRRVQQEIDDVIGQVRRP----------EMGDQAHMPYTTAVIHEVQRFGDIVPLGVT 353
Query: 384 YVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKDG 443
++ S D+ G +P G+T+ ++ SV + + +W E F PE +L A+G +P
Sbjct: 354 HMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW-EKPFRFHPEHFLDAQGHFVKP---- 408
Query: 444 YKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLVPG 484
F+ F+AG R CLG+ LA +++ +++L + S+ G
Sbjct: 409 EAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 449
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 148/341 (43%), Gaps = 40/341 (11%)
Query: 154 VNRTIKNRLWRILDQAAEQNFPVDLQDLLLRLTFDNICGLTFGKD----PETLSPELPEN 209
V+R + L R + +A N+ D+ D L R F++I + FG+ E ++PE
Sbjct: 134 VSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQR- 192
Query: 210 PFSIAFDTATEATLQRLLYPGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEA----- 264
F A ++ L P L+RL F K + +V+ S D +
Sbjct: 193 -FIDAIYQMFHTSVPMLNLPPDLFRL---FRTKTWKDHVAAWDVIFSKADIYTQNFYWEL 248
Query: 265 -RKESPSDD---LLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIM 320
+K S D +L R + + + V + +A G DT+S+ L W + +
Sbjct: 249 RQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLA-----GGVDTTSMTLQWHLYEMA 303
Query: 321 NHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPE 380
+ V+ + E+ + +G PL LKA++ ETLRL+P
Sbjct: 304 RNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL----------LKASIKETLRLHPISVT 353
Query: 381 DFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPP 440
+Y+V+D VL D +PA + V +IY++GR T + D F P RWLS + +
Sbjct: 354 LQRYLVNDLVLRD-YMIPAKTLVQVAIYALGREPTFFF-DPENFDPTRWLSKDKN----- 406
Query: 441 KDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSL 481
++ + F G R CLG+ +A L+M +L +R+ +
Sbjct: 407 ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEI 447
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 148/341 (43%), Gaps = 40/341 (11%)
Query: 154 VNRTIKNRLWRILDQAAEQNFPVDLQDLLLRLTFDNICGLTFGKD----PETLSPELPEN 209
V+R + L R + +A N+ D+ D L R F++I + FG+ E ++PE
Sbjct: 131 VSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQR- 189
Query: 210 PFSIAFDTATEATLQRLLYPGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEA----- 264
F A ++ L P L+RL F K + +V+ S D +
Sbjct: 190 -FIDAIYQMFHTSVPMLNLPPDLFRL---FRTKTWKDHVAAWDVIFSKADIYTQNFYWEL 245
Query: 265 -RKESPSDD---LLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIM 320
+K S D +L R + + + V + +A G DT+S+ L W + +
Sbjct: 246 RQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLA-----GGVDTTSMTLQWHLYEMA 300
Query: 321 NHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPE 380
+ V+ + E+ + +G PL LKA++ ETLRL+P
Sbjct: 301 RNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL----------LKASIKETLRLHPISVT 350
Query: 381 DFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPP 440
+Y+V+D VL D +PA + V +IY++GR T + D F P RWLS + +
Sbjct: 351 LQRYLVNDLVLRD-YMIPAKTLVQVAIYALGREPTFFF-DPENFDPTRWLSKDKN----- 403
Query: 441 KDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSL 481
++ + F G R CLG+ +A L+M +L +R+ +
Sbjct: 404 ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEI 444
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 116/246 (47%), Gaps = 23/246 (9%)
Query: 242 GAEKRLKKSLEVVESYMDGAIEARK-----ESPSDDLLSRFMKKRDVDGNLFPSAVLQRI 296
G +++ + L+ +E ++ +E + SP D + S ++ ++ + N L+ +
Sbjct: 210 GPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNL 269
Query: 297 A---LNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPL 353
LN AG +T S L + F L+M HP VE K+ +EI V+ + R +P
Sbjct: 270 VMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNR---------QP- 319
Query: 354 EFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRM 413
+F++ K+ Y++A + E R +P V D F+P G+ V + SV R
Sbjct: 320 KFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRD 379
Query: 414 KTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAV 473
+ + + +F P+ +L+ +G K FV F+ G R C G+ LA +++ + V
Sbjct: 380 PSFF-SNPQDFNPQHFLNEKGQF----KKSDAFVPFSIGKRNCFGEGLARMELFLFFTTV 434
Query: 474 LLRYRL 479
+ +RL
Sbjct: 435 MQNFRL 440
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 160/403 (39%), Gaps = 83/403 (20%)
Query: 113 AFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQ-AMARWVNRTIKNRLWRILDQA-- 169
AFH +GI ++G TW R+ F+ TLR M + N + R L +A
Sbjct: 84 AFHAHRDRGIIFNNGPTWKDIRR-----FSLTTLRNYGMGKQGNESRIQREAHFLLEALR 138
Query: 170 AEQNFPVDLQDLLLRLTFDNICGLTFGKDPETLSPELPENPFSIAFDTATEATLQRLLY- 228
Q P D L+ + I + F K FD E L RL+Y
Sbjct: 139 KTQGQPFDPTFLIGCAPCNVIADILFRKH----------------FDYNDEKFL-RLMYL 181
Query: 229 -------------------PGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES- 268
P FL L G+ +++ K++ V+ Y+ ++ +S
Sbjct: 182 FNENFHLLSTPWLQLYNNFPSFLHYLP-----GSHRKVIKNVAEVKEYVSERVKEHHQSL 236
Query: 269 -P------SDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMN 321
P +D LL K++ L+ + + AG +T+S L + ++M
Sbjct: 237 DPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMK 296
Query: 322 HPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPED 381
+P +E+K+ +EI V+ +R +K E P Y+ A + E R VP +
Sbjct: 297 YPEIEEKLHEEIDRVIGPSRIPAIKDRQEMP----------YMDAVVHEIQRFITLVPSN 346
Query: 382 FKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEG-----DR 436
+ + D + G +P G+ V ++ SV + D +FKPE +L+ G D
Sbjct: 347 LPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEF-PDPEKFKPEHFLNENGKFKYSDY 405
Query: 437 FEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRL 479
F+P F+ G R C G+ LA +++ A+L + L
Sbjct: 406 FKP---------FSTGKRVCAGEGLARMELFLLLCAILQHFNL 439
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 116/246 (47%), Gaps = 23/246 (9%)
Query: 242 GAEKRLKKSLEVVESYMDGAIEARK-----ESPSDDLLSRFMKKRDVDGNLFPSAVLQRI 296
G +++ + L+ +E ++ +E + SP D + S ++ ++ + N L+ +
Sbjct: 210 GPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNL 269
Query: 297 A---LNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPL 353
LN + G +T S L + F L+M HP VE K+ +EI V+ + R +P
Sbjct: 270 VMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNR---------QP- 319
Query: 354 EFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRM 413
+F++ K+ Y++A + E R +P V D F+P G+ V + SV R
Sbjct: 320 KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRD 379
Query: 414 KTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAV 473
+ + + +F P+ +L+ +G K FV F+ G R C G+ LA +++ + V
Sbjct: 380 PSFF-SNPQDFNPQHFLNEKGQF----KKSDAFVPFSIGKRNCFGEGLARMELFLFFTTV 434
Query: 474 LLRYRL 479
+ +RL
Sbjct: 435 MQNFRL 440
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 114/246 (46%), Gaps = 23/246 (9%)
Query: 242 GAEKRLKKSLEVVESYMDGAIEARK-----ESPSDDLLSRFMKKRDVDGNLFPSAVLQRI 296
G +++ K L+ +E ++ +E + SP D + S ++ ++ + N L+ +
Sbjct: 210 GPQQQAFKELQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNL 269
Query: 297 A---LNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPL 353
LN AG +T S L + F L+M HP VE K+ +EI V+ + R +P
Sbjct: 270 VMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNR---------QP- 319
Query: 354 EFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRM 413
+F++ K+ Y +A + E R +P + V+ D F+P G+ V + SV R
Sbjct: 320 KFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRD 379
Query: 414 KTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAV 473
+ + +F P+ +L +G K FV F+ G R C G+ LA +++ + +
Sbjct: 380 PRFF-SNPRDFNPQHFLDKKGQF----KKSDAFVPFSIGKRYCFGEGLARMELFLFFTTI 434
Query: 474 LLRYRL 479
+ +R
Sbjct: 435 MQNFRF 440
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 115/246 (46%), Gaps = 23/246 (9%)
Query: 242 GAEKRLKKSLEVVESYMDGAIEARK-----ESPSDDLLSRFMKKRDVDGNLFPSAVLQRI 296
G +++ + L+ +E ++ +E + SP D + S ++ ++ + N L+ +
Sbjct: 210 GPQQQAFQCLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNL 269
Query: 297 A---LNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPL 353
L + G +T S L + F L+M HP VE K+ +EI V+ + R +P
Sbjct: 270 VMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNR---------QP- 319
Query: 354 EFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRM 413
+F++ K+ Y++A + E R +P V D F+P G+ V + SV R
Sbjct: 320 KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRD 379
Query: 414 KTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAV 473
+ + + +F P+ +L+ +G K FV F+ G R C G+ LA +++ + V
Sbjct: 380 PSFF-SNPQDFNPQHFLNEKGQF----KKSDAFVPFSIGKRNCFGEGLARMELFLFFTTV 434
Query: 474 LLRYRL 479
+ +RL
Sbjct: 435 MQNFRL 440
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 115/246 (46%), Gaps = 23/246 (9%)
Query: 242 GAEKRLKKSLEVVESYMDGAIEARK-----ESPSDDLLSRFMKKRDVDGNLFPSAVLQRI 296
G +++ + L+ +E ++ +E + SP D + S ++ ++ + N L+ +
Sbjct: 210 GPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNL 269
Query: 297 A---LNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPL 353
L + G +T S L + F L+M HP VE K+ +EI V+ + R +P
Sbjct: 270 VMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNR---------QP- 319
Query: 354 EFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRM 413
+F++ K+ Y++A + E R +P V D F+P G+ V + SV R
Sbjct: 320 KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRD 379
Query: 414 KTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAV 473
+ + + +F P+ +L+ +G K FV F+ G R C G+ LA +++ + V
Sbjct: 380 PSFF-SNPQDFNPQHFLNEKGQF----KKSDAFVPFSIGKRNCFGEGLARMELFLFFTTV 434
Query: 474 LLRYRL 479
+ +RL
Sbjct: 435 MQNFRL 440
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 115/246 (46%), Gaps = 23/246 (9%)
Query: 242 GAEKRLKKSLEVVESYMDGAIEARK-----ESPSDDLLSRFMKKRDVDGNLFPSAVLQRI 296
G +++ + L+ +E ++ +E + SP D + S ++ ++ + N L+ +
Sbjct: 210 GPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNL 269
Query: 297 A---LNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPL 353
L + G +T S L + F L+M HP VE K+ +EI V+ + R +P
Sbjct: 270 VMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNR---------QP- 319
Query: 354 EFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRM 413
+F++ K+ Y++A + E R +P V D F+P G+ V + SV R
Sbjct: 320 KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRD 379
Query: 414 KTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAV 473
+ + + +F P+ +L+ +G K FV F+ G R C G+ LA +++ + V
Sbjct: 380 PSFF-SNPQDFNPQHFLNEKGQF----KKSDAFVPFSIGKRNCFGEGLARMELFLFFTTV 434
Query: 474 LLRYRL 479
+ +RL
Sbjct: 435 MQNFRL 440
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 180/418 (43%), Gaps = 57/418 (13%)
Query: 88 CHPKNIEHILRTRFE-NYPKG---PTWQKAFHDLLGQ--GIFNSDGETWLIQRKTAALEF 141
HP+++ H+ + FE +YP+ P W A+H + G+ TW +K +
Sbjct: 64 IHPEDVAHLFK--FEGSYPERYDIPPWL-AYHRYYQKPIGVLFKKSGTW---KKDRVVLN 117
Query: 142 TTRTLRQAMARW------VNRTIKNRLWRILDQAAEQNFPVDLQDLLLRLTFDNICGLTF 195
T +A+ + V++ + L + + Q F D+++ L F++I + F
Sbjct: 118 TEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMF 177
Query: 196 GKD----PETLSPELPENPFSIAFDTATEATLQRLLYPGFLWRLEKIFGIGAEKRLKKSL 251
G+ ET++PE F A ++ L P L+RL + K + +
Sbjct: 178 GERLGMLEETVNPE--AQKFIDAVYKMFHTSVPLLNVPPELYRLFRT------KTWRDHV 229
Query: 252 EVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLF-----PSAVLQRIALN---FVLA 303
++ + A E E DL R + R+ G L+ +L+ + N +
Sbjct: 230 AAWDTIFNKA-EKYTEIFYQDL-RRKTEFRNYPGILYCLLKSEKMLLEDVKANITEMLAG 287
Query: 304 GRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIY 363
G +T+S+ L W + + V++ + +E+ ++ G K PL
Sbjct: 288 GVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKMLQMVPL---------- 337
Query: 364 LKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLE 423
LKA++ ETLRL+P +Y SD VL D +PA + V +IY++GR + +
Sbjct: 338 LKASIKETLRLHPISVTLQRYPESDLVLQD-YLIPAKTLVQVAIYAMGRDPAFFSSPD-K 395
Query: 424 FKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSL 481
F P RWLS + D ++ + F G R C+G+ +A L+M +L +++ +
Sbjct: 396 FDPTRWLSKDKDLIH-----FRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEM 448
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 17/234 (7%)
Query: 270 SDDLLSRFMKKR-DVDGNL-FPSAVLQRIALNFVLAGRDTSSVALSW-FFWLIMNHPCVE 326
+D L+ +K+ D + N+ + I L+ AG DT + A+SW +L+MN P V+
Sbjct: 255 TDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMN-PRVQ 313
Query: 327 QKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVV 386
+KI +E+ TV+ +R + + L Y++A + ET R VP +
Sbjct: 314 RKIQEELDTVIGRSRRPRL----------SDRSHLPYMEAFILETFRHSSFVPFTIPHST 363
Query: 387 SDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKF 446
+ D G ++P G V + + + + +W EF PER+L+ +G + + K
Sbjct: 364 TRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPS-EFLPERFLTPDGAIDKVLSE--KV 420
Query: 447 VAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLVPGHRVEQKMSLTLFMKHG 500
+ F G R C+G+ +A ++ + +L R S+ G +V+ L MKH
Sbjct: 421 IIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMTPIYGLTMKHA 474
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 198/470 (42%), Gaps = 60/470 (12%)
Query: 35 PFVGSLPILIKNRKRLHDWIASNLRATGGSATYQTTTVALPYLATKQGFYT--VTCHPKN 92
P VGSLP L + H + +N ++ P + + G T + H +
Sbjct: 17 PLVGSLPFLPR-----HGHMHNNF--------FKLQKKYGPIYSVRMGTKTTVIVGHHQL 63
Query: 93 IEHILRTRFENYPKGPTWQKAFHDLLG---QGI-FNSDGETWLIQRKTAALEFTTRTLRQ 148
+ +L + +++ P Q A D+ +GI F G W + R+ A F L +
Sbjct: 64 AKEVLIKKGKDFSGRP--QMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFA---LFK 118
Query: 149 AMARWVNRTIKNRLWRILDQAAEQNF-PVDLQDLLLRLTFDNICGLTFGKDPETLSPELP 207
+ + + I + + D A N +D+ + + I + F + PEL
Sbjct: 119 DGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELN 178
Query: 208 --ENPFSIAFDTATEATLQRLLYPGFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEAR 265
+N D ++ +L L+ W KIF ++LK +++ ++ +E
Sbjct: 179 VIQNYNEGIIDNLSKDSLVDLVP----WL--KIFPNKTLEKLKSHVKIRNDLLNKILENY 232
Query: 266 KESPSDDLLSRFM------KKRDVDGNLFPSAVLQRIALNFVL--------AGRDTSSVA 311
KE D ++ + K +GN P + ++ N +L AG +T++
Sbjct: 233 KEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSV 292
Query: 312 LSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAET 371
+ W ++++P V++K+ +EI + +R + + ++L+ L+A + E
Sbjct: 293 VKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTIS----------DRNRLLLLEATIREV 342
Query: 372 LRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLS 431
LRL P P + + D V G+ V +++++ + W + +F PER+L+
Sbjct: 343 LRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPD-QFMPERFLN 401
Query: 432 AEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSL 481
G + P Y + F AGPR+C+G+ LA ++ + +L R+ L +
Sbjct: 402 PAGTQLISPSVSY--LPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEV 449
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 155/365 (42%), Gaps = 45/365 (12%)
Query: 119 GQGIFNSDGETWLIQRKTAALEFTTRTLRQ-AMARWVNRTIKNRLW---RILDQAAEQNF 174
G G+ ++GE W R+ F+ T+R M + R+++ R+ R L + ++
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGK---RSVEERIQEEARCLVEELRKSK 142
Query: 175 PVDLQDLLL--RLTFDNICGLTFGKDPETLSP---ELPENPFSIAFDTATEATLQRLLYP 229
L + LL +T + IC + FGK + P L + F ++ ++ L+
Sbjct: 143 GALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 230 GFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PS------DDLLSRFMKKR 281
GFL G +++ ++L+ + +++ ++E + + PS D L R K +
Sbjct: 203 GFLKHFP-----GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDK 257
Query: 282 DVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETR 341
+ F L L+ AG +T+S L + F L++ +P V +++ EI V+ R
Sbjct: 258 SDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR 317
Query: 342 GSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGS 401
P D+ K+ Y A + E RL +P + V+ D G +P +
Sbjct: 318 ----------PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNT 367
Query: 402 TVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDL 461
V + + S + E F P +L A G K F+ F+ G R CLG+ +
Sbjct: 368 EV-FPVLSSALHDPRYFETPNTFNPGHFLDANGAL----KRNEGFMPFSLGKRICLGEGI 422
Query: 462 AYLQM 466
A ++
Sbjct: 423 ARTEL 427
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 157/365 (43%), Gaps = 45/365 (12%)
Query: 119 GQGIFNSDGETWLIQRKTAALEFTTRTLRQ-AMARWVNRTIKNRLW---RILDQAAEQNF 174
G G+ ++GE W R+ F+ T+R M + R+++ R+ R L + ++
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGK---RSVEERIQEEARCLVEELRKSK 142
Query: 175 PVDLQDLLL--RLTFDNICGLTFGKDPETLSP---ELPENPFSIAFDTATEATLQRLLYP 229
L + LL +T + IC + FGK + P L + F ++ ++ L+
Sbjct: 143 GALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 230 GFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PS------DDLLSRFMKKR 281
GFL K F G +++ ++L+ + +++ ++E + + PS D L R K +
Sbjct: 203 GFL----KYFP-GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDK 257
Query: 282 DVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETR 341
+ F L L+ AG +T+S L + F L++ +P V +++ EI V+ R
Sbjct: 258 SDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR 317
Query: 342 GSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGS 401
P D+ K+ Y A + E RL +P + V+ D G +P +
Sbjct: 318 ----------PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNT 367
Query: 402 TVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDL 461
V + + S + E F P +L A G K F+ F+ G R CLG+ +
Sbjct: 368 EV-FPVLSSALHDPRYFETPNTFNPGHFLDANGAL----KRNEGFMPFSLGKRICLGEGI 422
Query: 462 AYLQM 466
A ++
Sbjct: 423 ARTEL 427
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 157/365 (43%), Gaps = 45/365 (12%)
Query: 119 GQGIFNSDGETWLIQRKTAALEFTTRTLRQ-AMARWVNRTIKNRLW---RILDQAAEQNF 174
G G+ ++GE W R+ F+ T+R M + R+++ R+ R L + ++
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGK---RSVEERIQEEARCLVEELRKSK 142
Query: 175 PVDLQDLLL--RLTFDNICGLTFGKDPETLSP---ELPENPFSIAFDTATEATLQRLLYP 229
L + LL +T + IC + FGK + P L + F ++ ++ L+
Sbjct: 143 GALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 230 GFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PS------DDLLSRFMKKR 281
GFL K F G +++ ++L+ + +++ ++E + + PS D L R K +
Sbjct: 203 GFL----KYFP-GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDK 257
Query: 282 DVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETR 341
+ F L L+ AG +T+S L + F L++ +P V +++ EI V+ R
Sbjct: 258 SDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR 317
Query: 342 GSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGS 401
P D+ K+ Y A + E RL +P + V+ D G +P +
Sbjct: 318 ----------PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNT 367
Query: 402 TVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDL 461
V + + S + E F P +L A G K F+ F+ G R CLG+ +
Sbjct: 368 EV-FPVLSSALHDPRYFETPNTFNPGHFLDANGAL----KRNEGFMPFSLGKRICLGEGI 422
Query: 462 AYLQM 466
A ++
Sbjct: 423 ARTEL 427
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 157/365 (43%), Gaps = 45/365 (12%)
Query: 119 GQGIFNSDGETWLIQRKTAALEFTTRTLRQ-AMARWVNRTIKNRLW---RILDQAAEQNF 174
G G+ ++GE W R+ F+ T+R M + R+++ R+ R L + ++
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGK---RSVEERIQEEARCLVEELRKSK 142
Query: 175 PVDLQDLLL--RLTFDNICGLTFGKDPETLSP---ELPENPFSIAFDTATEATLQRLLYP 229
L + LL +T + IC + FGK + P L + F ++ ++ L+
Sbjct: 143 GALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 230 GFLWRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKES--PS------DDLLSRFMKKR 281
GFL K F G +++ ++L+ + +++ ++E + + PS D L R K +
Sbjct: 203 GFL----KYFP-GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDK 257
Query: 282 DVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETR 341
+ F L L+ AG +T+S L + F L++ +P V +++ EI V+ R
Sbjct: 258 SDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR 317
Query: 342 GSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGS 401
P D+ K+ Y A + E RL +P + V+ D G +P +
Sbjct: 318 ----------PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNT 367
Query: 402 TVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDL 461
V + + S + E F P +L A G K F+ F+ G R CLG+ +
Sbjct: 368 EV-FPVLSSALHDPRYFETPNTFNPGHFLDANGAL----KRNEGFMPFSLGKRICLGEGI 422
Query: 462 AYLQM 466
A ++
Sbjct: 423 ARTEL 427
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 24/250 (9%)
Query: 242 GAEKRLKKSLEVVESYMDGAIEARKES----PSDDLLSRFMKKRDVDGNLFPSAV----L 293
G +L K++ ++SY+ ++ +ES D + F+ K + + + PS L
Sbjct: 211 GTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESL 270
Query: 294 QRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPL 353
+ A++ AG +T+S L + L++ HP V K+ +EI V+ R ++ P
Sbjct: 271 ENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMP- 329
Query: 354 EFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRM 413
Y A + E R +P + V+ D+ +P G+T+ S+ SV
Sbjct: 330 ---------YTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHD 380
Query: 414 KTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAV 473
+ + F P +L EG F K F+ F+AG R C+G+ LA +++ +++
Sbjct: 381 NKEFPNPEM-FDPHHFLD-EGGNF---KKSKYFMPFSAGKRICVGEALAGMELFLFLTSI 435
Query: 474 LLRYRL-SLV 482
L + L SLV
Sbjct: 436 LQNFNLKSLV 445
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 24/250 (9%)
Query: 242 GAEKRLKKSLEVVESYMDGAIEARKES----PSDDLLSRFMKKRDVDGNLFPSAV----L 293
G +L K++ ++SY+ ++ +ES D + F+ K + + + PS L
Sbjct: 209 GTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESL 268
Query: 294 QRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPL 353
+ A++ AG +T+S L + L++ HP V K+ +EI V+ R ++ P
Sbjct: 269 ENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMP- 327
Query: 354 EFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRM 413
Y A + E R +P + V+ D+ +P G+T+ S+ SV
Sbjct: 328 ---------YTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHD 378
Query: 414 KTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAV 473
+ + F P +L EG F K F+ F+AG R C+G+ LA +++ +++
Sbjct: 379 NKEFPNPEM-FDPHHFLD-EGGNF---KKSKYFMPFSAGKRICVGEALAGMELFLFLTSI 433
Query: 474 LLRYRL-SLV 482
L + L SLV
Sbjct: 434 LQNFNLKSLV 443
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 166/376 (44%), Gaps = 37/376 (9%)
Query: 119 GQGIFNSDGETWLIQRKTAALEFTTRTLRQ-AMARWVNRTIKNRLWR----ILDQAAEQN 173
G GI S+ +TW R+ F+ TLR M + R+I++R+ ++++ + N
Sbjct: 91 GLGIAFSNAKTWKEMRR-----FSLMTLRNFGMGK---RSIEDRIQEEARCLVEELRKTN 142
Query: 174 F-PVDLQDLLLRLTFDNICGLTFGKDPETLSPELPENPFSIAFDTATEATLQRLLYPGFL 232
P D +L + IC + F + E + S+ + T +Y F
Sbjct: 143 ASPCDPTFILGCAPCNVICSVIFHNRFDYKDEEFLKLMESLHENVELLGTPWLQVYNNFP 202
Query: 233 WRLEKIFGIGAEKRLKKSLEVVESYMDGAIEARKE----SPSDDLLSRFMKKRDVDGNL- 287
L+ GI K L K+ + +++++ ++ ++ + D + F+ K + + NL
Sbjct: 203 ALLDYFPGI--HKTLLKNADYIKNFIMEKVKEHQKLLDVNNPRDFIDCFLIKMEQENNLE 260
Query: 288 FPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKK 347
F L + AG +T+S L + L++ HP V ++ +EI V+ R ++
Sbjct: 261 FTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQ- 319
Query: 348 WMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSI 407
+ ++ Y A + E R +P + + V+ DV F+P G+ + S+
Sbjct: 320 ---------DRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSL 370
Query: 408 YSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMK 467
SV + + + F P +L G+ K F+ F+AG R C+G+ LA +++
Sbjct: 371 TSVLHDEKAFPNPKV-FDPGHFLDESGNF----KKSDYFMPFSAGKRMCVGEGLARMELF 425
Query: 468 SAASAVLLRYRL-SLV 482
+++L ++L SLV
Sbjct: 426 LFLTSILQNFKLQSLV 441
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 23/246 (9%)
Query: 242 GAEKRLKKSLEVVESYMDGAIEARKESPS--------DDLLSRFMKKRDVDGNLFPSAVL 293
G +L K+L +ES + ++ +ES D L + K++ + F L
Sbjct: 211 GTHNKLLKNLAFMESDILEKVKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENL 270
Query: 294 QRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPL 353
A + + AG +T+S L + L++ HP V K+ +EI V+ R ++ P
Sbjct: 271 VITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMP- 329
Query: 354 EFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRM 413
Y A + E R +P + V+ DV +P G+T+ S+ SV
Sbjct: 330 ---------YTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHD 380
Query: 414 KTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAV 473
+ + F P +L EG F+ K Y F+ F+AG R C+G+ LA +++ + +
Sbjct: 381 NKEFPNPEM-FDPRHFLD-EGGNFK--KSNY-FMPFSAGKRICVGEGLARMELFLFLTFI 435
Query: 474 LLRYRL 479
L + L
Sbjct: 436 LQNFNL 441
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 44/235 (18%)
Query: 243 AEKRLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVL 302
AE+R + + EVV +D +E R+ P DDLLS ++ +D D + L IAL +L
Sbjct: 182 AEQRGQAAREVVNFILD-LVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLL 240
Query: 303 AGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLI 362
AG +TS + +L++ HP D+++ V ++
Sbjct: 241 AGFETSVSLIGIGTYLLLTHP-------DQLALVRRDPSA-------------------- 273
Query: 363 YLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCL 422
L A+ E LR Y + PE +++V G +P STV + + R
Sbjct: 274 -LPNAVEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR---------- 321
Query: 423 EFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
P+++ + RF+ +D ++F G C+G+ LA L+ + A A+ R+
Sbjct: 322 --DPKQF--PDPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 68/154 (44%), Gaps = 17/154 (11%)
Query: 306 DTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLK 365
DT++ L + + +P V+Q + E K E PL L+
Sbjct: 291 DTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPL----------LR 340
Query: 366 AALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFK 425
AAL ETLRLYP V + VVS D++ +PAG+ V +YS+GR ++ +
Sbjct: 341 AALKETLRLYP-VGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRP-ERYN 398
Query: 426 PERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGK 459
P+RWL G + V F G R CLG+
Sbjct: 399 PQRWLDIRGS-----GRNFHHVPFGFGMRQCLGR 427
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 44/235 (18%)
Query: 243 AEKRLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVL 302
AE+R + + EVV +D +E R+ P DDLLS ++ +D D + L IAL +L
Sbjct: 181 AEQRGQAAREVVNFILD-LVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLL 239
Query: 303 AGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLI 362
AG ++S + +L++ HP D+++ V ++
Sbjct: 240 AGFESSVSLIGIGTYLLLTHP-------DQLALVRRDPSA-------------------- 272
Query: 363 YLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCL 422
L A+ E LR Y + PE +++V G +P STV + + R D
Sbjct: 273 -LPNAVEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR-------DPK 323
Query: 423 EFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
+F + RF+ +D ++F G C+G+ LA L+ + A A+ R+
Sbjct: 324 QFP-------DPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 44/235 (18%)
Query: 243 AEKRLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVL 302
AE+R + + EVV +D +E R+ P DDLLS ++ +D D + L IAL +L
Sbjct: 182 AEQRGQAAREVVNFILD-LVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLL 240
Query: 303 AGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLI 362
AG ++S + +L++ HP D+++ V ++
Sbjct: 241 AGFESSVSLIGIGTYLLLTHP-------DQLALVRRDPSA-------------------- 273
Query: 363 YLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCL 422
L A+ E LR Y + PE +++V G +P STV + + R
Sbjct: 274 -LPNAVEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR---------- 321
Query: 423 EFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
P+++ + RF+ +D ++F G C+G+ LA L+ + A A+ R+
Sbjct: 322 --DPKQF--PDPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 107/243 (44%), Gaps = 47/243 (19%)
Query: 245 KRLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAG 304
+ ++++ E +YM I+ R++ P+DDL+S ++ RD +L +L +A+ ++AG
Sbjct: 197 EEMQEAAEQAYAYMGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLD-LAIGLLVAG 255
Query: 305 RDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYL 364
++++ ++ F +L+M P + ++++D + P +E + + L
Sbjct: 256 YESTTTQIADFVYLLMTRPELRRQLLDRPELI---------------PSAVEELTRWVPL 300
Query: 365 KAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEF 424
A VP +Y V D L G + AG V S + R D +F
Sbjct: 301 GVGTA--------VP---RYAVEDVTL-RGVTIRAGEPVLASTGAANR-------DQAQF 341
Query: 425 KPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLVPG 484
+ DR + + + + F G CLG LA ++++ A +L R +PG
Sbjct: 342 P-------DADRIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQR-----LPG 389
Query: 485 HRV 487
R+
Sbjct: 390 IRL 392
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 44/235 (18%)
Query: 243 AEKRLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVL 302
AE+R + + EVV +D +E R+ P DDLLS ++ +D D + L IAL +L
Sbjct: 181 AEQRGQAAREVVNFILD-LVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLL 239
Query: 303 AGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLI 362
AG + S + +L++ HP D+++ V ++
Sbjct: 240 AGFEASVSLIGIGTYLLLTHP-------DQLALVRRDPSA-------------------- 272
Query: 363 YLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCL 422
L A+ E LR Y + PE +++V G +P STV + + R D
Sbjct: 273 -LPNAVEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR-------DPK 323
Query: 423 EFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
+F + RF+ +D ++F G C+G+ LA L+ + A A+ R+
Sbjct: 324 QFP-------DPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 44/235 (18%)
Query: 243 AEKRLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVL 302
AE+R + + EVV +D +E R+ P DDLLS ++ +D D + L IAL +L
Sbjct: 182 AEQRGQAAREVVNFILD-LVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLL 240
Query: 303 AGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLI 362
AG + S + +L++ HP D+++ V ++
Sbjct: 241 AGFEASVSLIGIGTYLLLTHP-------DQLALVRRDPSA-------------------- 273
Query: 363 YLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCL 422
L A+ E LR Y + PE +++V G +P STV + + R D
Sbjct: 274 -LPNAVEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR-------DPK 324
Query: 423 EFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
+F + RF+ +D ++F G C+G+ LA L+ + A A+ R+
Sbjct: 325 QFP-------DPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 107/243 (44%), Gaps = 47/243 (19%)
Query: 245 KRLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAG 304
+ ++++ E +YM I+ R++ P+DDL+S ++ RD +L +L +A+ ++AG
Sbjct: 197 EEMQEAAEQAYAYMGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLD-LAIGLLVAG 255
Query: 305 RDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYL 364
++++ ++ F +L+M P + ++++D + P +E + + L
Sbjct: 256 YESTTTQIADFVYLLMTRPELRRQLLDRPELI---------------PSAVEELTRWVPL 300
Query: 365 KAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEF 424
A +P +Y V D L G + AG V S + R D +F
Sbjct: 301 GVGTA-----FP------RYAVEDVTL-RGVTIRAGEPVLASTGAANR-------DQAQF 341
Query: 425 KPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLVPG 484
+ DR + + + + F G CLG LA ++++ A +L R +PG
Sbjct: 342 P-------DADRIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQR-----LPG 389
Query: 485 HRV 487
R+
Sbjct: 390 IRL 392
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 47/243 (19%)
Query: 245 KRLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAG 304
+ ++++ E +YM I+ R++ P+DDL+S ++ RD +L +L +A+ ++AG
Sbjct: 197 EEMQEAAEQAYAYMGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLD-LAIGLLVAG 255
Query: 305 RDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYL 364
++++ ++ F +L+M P + ++++D + P +E + + L
Sbjct: 256 YESTTTQIADFVYLLMTRPELRRQLLDRPELI---------------PSAVEELTRWVPL 300
Query: 365 KAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEF 424
A +Y V D L G + AG V S + R D +F
Sbjct: 301 GVGTAAP-----------RYAVEDVTL-RGVTIRAGEPVLASTGAANR-------DQAQF 341
Query: 425 KPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLVPG 484
+ DR + + + + F G CLG LA ++++ A +L R +PG
Sbjct: 342 P-------DADRIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQR-----LPG 389
Query: 485 HRV 487
R+
Sbjct: 390 IRL 392
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 44/235 (18%)
Query: 243 AEKRLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVL 302
AE+R + + EVV +D +E R+ P DDLLS + +D D + L IAL +L
Sbjct: 181 AEQRGQAAREVVNFILD-LVERRRTEPGDDLLSALISVQDDDDGRLSADELTSIALVLLL 239
Query: 303 AGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLI 362
AG + S + +L++ HP D+++ V +
Sbjct: 240 AGFEASVSLIGIGTYLLLTHP-------DQLALVRADPSA-------------------- 272
Query: 363 YLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCL 422
L A+ E LR Y + PE +++V G +P STV + + R D
Sbjct: 273 -LPNAVEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR-------DPS 323
Query: 423 EFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
+F + RF+ +D ++F G C+G+ LA L+ + A A+ R+
Sbjct: 324 QFP-------DPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 104/249 (41%), Gaps = 23/249 (9%)
Query: 242 GAEKRLKKSLEVVESYMDGAIEARKESPS--------DDLLSRFMKKRDVDGNLFPSAVL 293
G ++ K++ + SY+ ++ + S D L + +++D + F L
Sbjct: 210 GTHNKVLKNVALTRSYIREKVKEHQASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENL 269
Query: 294 QRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPL 353
+ +AG +T+S L + L++ HP V K+ +EI V+ R ++ P
Sbjct: 270 VGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMP- 328
Query: 354 EFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRM 413
Y A + E R VP + V+ D +P G+T+ + SV
Sbjct: 329 ---------YTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHD 379
Query: 414 KTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAV 473
+ + F P +L G+ F+ K Y F+ F+AG R C G+ LA +++ + +
Sbjct: 380 DKEFPNPNI-FDPGHFLDKNGN-FK--KSDY-FMPFSAGKRICAGEGLARMELFLFLTTI 434
Query: 474 LLRYRLSLV 482
L + L V
Sbjct: 435 LQNFNLKSV 443
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 93/232 (40%), Gaps = 45/232 (19%)
Query: 246 RLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGR 305
++++ L + Y+ AIE RK P DDL S + R + L+ + ++AG
Sbjct: 198 KVEQGLGRMFDYLVAAIEKRKVEPGDDLTSDIV--RAFHDGVLDDYELRTLVATVLVAGY 255
Query: 306 DTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLK 365
+T++ L+ + HP +WM+ E +L
Sbjct: 256 ETTNHQLALAMYDFAQHP----------------------DQWMK----IKENPELA--P 287
Query: 366 AALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFK 425
A+ E LR P++P V ++D +G +P G+ V + R ++
Sbjct: 288 QAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF-------- 339
Query: 426 PERWLSAEGDRFE-PPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLR 476
A+ DRF+ K +AF GP CLG LA L++ A +A+ R
Sbjct: 340 ------ADADRFDITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATR 385
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 93/232 (40%), Gaps = 45/232 (19%)
Query: 246 RLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGR 305
++++ L + Y+ AIE RK P DDL S + R + L+ + ++AG
Sbjct: 188 KVEQGLGRMFDYLVAAIEKRKVEPGDDLTSDIV--RAFHDGVLDDYELRTLVATVLVAGY 245
Query: 306 DTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLK 365
+T++ L+ + HP +WM+ E +L
Sbjct: 246 ETTNHQLALAMYDFAQHP----------------------DQWMK----IKENPELA--P 277
Query: 366 AALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFK 425
A+ E LR P++P V ++D +G +P G+ V + R ++
Sbjct: 278 QAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF-------- 329
Query: 426 PERWLSAEGDRFE-PPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLR 476
A+ DRF+ K +AF GP CLG LA L++ A +A+ R
Sbjct: 330 ------ADADRFDITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATR 375
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 48/202 (23%)
Query: 297 ALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFD 356
A+ ++AG +T + AL+W F L+ + P ++++ +
Sbjct: 215 AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA-------------------- 254
Query: 357 EADKLIYLKAALAETLRLYPSV-----PEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVG 411
AA E LRLYP + ++ +D LP GT T+ S Y
Sbjct: 255 --------LAAFQEALRLYPPAWILTRRLERPLLLGEDRLPQGT------TLVLSPYVTQ 300
Query: 412 RMKTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAAS 471
R+ GE F+PER+L+ G ++ F G R CLG+D A L+
Sbjct: 301 RLYFPEGE---AFQPERFLAERGT------PSGRYFPFGLGQRLCLGRDFALLEGPIVLR 351
Query: 472 AVLLRYRLSLVPGHRVEQKMSL 493
A R+RL +P RV +++L
Sbjct: 352 AFFRRFRLDPLPFPRVLAQVTL 373
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 82/202 (40%), Gaps = 48/202 (23%)
Query: 297 ALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFD 356
A+ ++AG +T + AL+W F L+ + P ++++ +
Sbjct: 215 AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA-------------------- 254
Query: 357 EADKLIYLKAALAETLRLYPSV-----PEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVG 411
AA E LRLYP + ++ +D LP GT T+ S Y
Sbjct: 255 --------LAAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGT------TLVLSPYVTQ 300
Query: 412 RMKTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAAS 471
R+ GE F+PER+L G ++ F G R CLG+D A L+
Sbjct: 301 RLHFPDGE---AFRPERFLEERGT------PSGRYFPFGLGQRLCLGRDFALLEGPIVLR 351
Query: 472 AVLLRYRLSLVPGHRVEQKMSL 493
A R+RL +P RV +++L
Sbjct: 352 AFFRRFRLDPLPFPRVLAQVTL 373
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 45/243 (18%)
Query: 248 KKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDT 307
+ ++ + Y+ I++++ +DLLS ++ D DG+ S L +A ++AG +T
Sbjct: 208 QTAMAEMSGYLSRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHET 267
Query: 308 SSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAA 367
+ ++ + +++HP D+++ + + + L A
Sbjct: 268 TVNLIANGMYALLSHP-------DQLAALRAD---------------------MTLLDGA 299
Query: 368 LAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPE 427
+ E LR V + V DGT +PAG TV + R PE
Sbjct: 300 VEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHR------------TPE 347
Query: 428 RWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLR---YRLSLVPG 484
R+ + RF+ +D +AF G C+G LA L+ + A A+L R L + PG
Sbjct: 348 RF--PDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPG 405
Query: 485 HRV 487
V
Sbjct: 406 ELV 408
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 45/243 (18%)
Query: 248 KKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDT 307
+ ++ + Y+ I++++ +DLLS ++ D DG+ S L +A ++AG +T
Sbjct: 208 QTAMAEMSGYLSRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHET 267
Query: 308 SSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAA 367
+ ++ + +++HP D+++ + + + L A
Sbjct: 268 TVNLIANGMYALLSHP-------DQLAALRAD---------------------MTLLDGA 299
Query: 368 LAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPE 427
+ E LR V + V DGT +PAG TV + R PE
Sbjct: 300 VEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHR------------TPE 347
Query: 428 RWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLR---YRLSLVPG 484
R+ + RF+ +D +AF G C+G LA L+ + A A+L R L + PG
Sbjct: 348 RF--PDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPG 405
Query: 485 HRV 487
V
Sbjct: 406 ELV 408
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 45/243 (18%)
Query: 248 KKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDT 307
+ ++ + Y+ I++++ +DLLS ++ D DG+ S L +A ++AG +T
Sbjct: 208 QTAMAEMSGYLSRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHET 267
Query: 308 SSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAA 367
+ ++ + +++HP D+++ + + + L A
Sbjct: 268 TVNLIANGMYALLSHP-------DQLAALRAD---------------------MTLLDGA 299
Query: 368 LAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPE 427
+ E LR V + V DGT +PAG TV + R PE
Sbjct: 300 VEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHR------------TPE 347
Query: 428 RWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLR---YRLSLVPG 484
R+ + RF+ +D +AF G C+G LA L+ + A A+L R L + PG
Sbjct: 348 RF--PDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPG 405
Query: 485 HRV 487
V
Sbjct: 406 ELV 408
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 248 KKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDT 307
+++ + +Y+D I ++ P DDL SR + ++ +G L A L +A + AG +T
Sbjct: 191 RRAFAELRAYIDDLITRKESEPGDDLFSRQIARQRQEGTL-DHAGLVSLAFLLLTAGHET 249
Query: 308 SSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAA 367
++ +S +++HP E TV+K G P+ +E L Y A
Sbjct: 250 TANMISLGVVGLLSHP--------EQLTVVKANPGRT-------PMAVEEL--LRYFTIA 292
Query: 368 LAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPE 427
T RL ++DV G + AG V S+ S W D FK
Sbjct: 293 DGVTSRL-----------ATEDVEIGGVSIKAGEGVIVSMLSAN-----W--DPAVFKDP 334
Query: 428 RWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMK 467
L E + +AF GP CLG++LA ++++
Sbjct: 335 AVLDVE-------RGARHHLAFGFGPHQCLGQNLARMELQ 367
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 303 AGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLI 362
A +DT S AL W L +P V+ ++ E+ V+ R P D+ + L
Sbjct: 290 ASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDR---------LPCMGDQPN-LP 339
Query: 363 YLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCL 422
Y+ A L E +R VP + + + G +P + V + +SV W +
Sbjct: 340 YVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKW-PNPE 398
Query: 423 EFKPERWLSAEGDRFEPPKD-GYKFVAFNAGPRTCLGKDLAYLQM 466
F P R+L +G KD + + F+ G R C+G++L+ +Q+
Sbjct: 399 NFDPARFLDKDG---LINKDLTSRVMIFSVGKRRCIGEELSKMQL 440
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 87/223 (39%), Gaps = 45/223 (20%)
Query: 258 MDGAIEARKESPSDDLLSRFMKKRD--VDGNLFPSAVLQRIALNFVLAGRDTSSVALSWF 315
+D I A++ +P DD+ S + RD DG+ L+ L + AG +T+ +
Sbjct: 195 LDQLIAAKRATPGDDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQA 254
Query: 316 FWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLY 375
++ P D+++ V K W + + ETLR
Sbjct: 255 VHTLLTRP-------DQLALVRK-----GEVTWAD----------------VVEETLRHE 286
Query: 376 PSVPE-DFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEG 434
P+V +Y V+D LPDG + G + S Y+ W ED
Sbjct: 287 PAVKHLPLRYAVTDIALPDGRTIARGEPILAS-YAAANRHPDWHEDA------------- 332
Query: 435 DRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
D F+ + + +AF G CLG LA +++ A ++ R+
Sbjct: 333 DTFDATRTVKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 17/232 (7%)
Query: 253 VVESYMDGAIEARKESPSD-DLLSRFMKKRDVDGN-LFPSAVLQRIALNFVLAGRDTSSV 310
+V M+G I SD D+L + + G F + + + ++ + AG TSS
Sbjct: 204 LVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSG 263
Query: 311 ALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAE 370
SW +M H ++DE+ + + R + F ++ L+ L E
Sbjct: 264 TASWTLIELMRHRDAYAAVIDELDELYGDGRS----------VSFHALRQIPQLENVLKE 313
Query: 371 TLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWL 430
TLRL+P + + V + G + G V S R+ + D +F P R+
Sbjct: 314 TLRLHPPLIILMR-VAKGEFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHDFVPARY- 370
Query: 431 SAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLV 482
E R E + + ++ F AG C+G A +Q+K+ S +L Y +
Sbjct: 371 --EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMA 420
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 17/232 (7%)
Query: 253 VVESYMDGAIEARKESPSD-DLLSRFMKKRDVDGN-LFPSAVLQRIALNFVLAGRDTSSV 310
+V M+G I SD D+L + + G F + + + ++ + AG TSS
Sbjct: 204 LVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSG 263
Query: 311 ALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAE 370
SW +M H ++DE+ + + R + F ++ L+ L E
Sbjct: 264 TASWTLIELMRHRDAYAAVIDELDELYGDGRS----------VSFHALRQIPQLENVLKE 313
Query: 371 TLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWL 430
TLRL+P + + V + G + G V S R+ + D +F P R+
Sbjct: 314 TLRLHPPLIILMR-VAKGEFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHDFVPARY- 370
Query: 431 SAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLV 482
E R E + + ++ F AG C+G A +Q+K+ S +L Y +
Sbjct: 371 --EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMA 420
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 17/232 (7%)
Query: 253 VVESYMDGAIEARKESPSD-DLLSRFMKKRDVDGN-LFPSAVLQRIALNFVLAGRDTSSV 310
+V M+G I SD D+L + + G F + + + ++ + AG TSS
Sbjct: 204 LVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSG 263
Query: 311 ALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAE 370
SW +M H ++DE+ + + R + F ++ L+ L E
Sbjct: 264 TASWTLIELMRHRDAYAAVIDELDELYGDGRS----------VSFHALRQIPQLENVLKE 313
Query: 371 TLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWL 430
TLRL+P + + V + G + G V S R+ + D +F P R+
Sbjct: 314 TLRLHPPLIILMR-VAKGEFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHDFVPARY- 370
Query: 431 SAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLV 482
E R E + + ++ F AG C+G A +Q+K+ S +L Y +
Sbjct: 371 --EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMA 420
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 17/232 (7%)
Query: 253 VVESYMDGAIEARKESPSD-DLLSRFMKKRDVDGN-LFPSAVLQRIALNFVLAGRDTSSV 310
+V M+G I SD D+L + + G F + + + ++ + AG TSS
Sbjct: 204 LVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSG 263
Query: 311 ALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAE 370
SW +M H ++DE+ + + R + F ++ L+ L E
Sbjct: 264 TASWTLIELMRHRDAYAAVIDELDELYGDGRS----------VSFHALRQIPQLENVLKE 313
Query: 371 TLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWL 430
TLRL+P + + V + G + G V S R+ + D +F P R+
Sbjct: 314 TLRLHPPLIILMR-VAKGEFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHDFVPARY- 370
Query: 431 SAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLV 482
E R E + + ++ F AG C+G A +Q+K+ S +L Y +
Sbjct: 371 --EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMA 420
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 49/232 (21%)
Query: 256 SYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWF 315
+Y+ G + ++ P D LL + ++ +G+L V+ IAL ++AG +T+ A++
Sbjct: 197 TYLHGLVGRKQAEPEDGLLDELIARQLEEGDLDHDEVVM-IALVLLVAGHETTVNAIALG 255
Query: 316 FWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLY 375
++ HP ++I +L++ V +EE L F
Sbjct: 256 ALTLIQHP-------EQIDVLLRDP--GAVSGVVEELLRFT------------------- 287
Query: 376 PSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGD 435
SV + + +D+ G + AG V SI T+ D ++ D
Sbjct: 288 -SVSDHIVRMAKEDIEVGGATIKAGDAVLVSI-------TLMNRDAKAYE-------NPD 332
Query: 436 RFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLVPGHRV 487
F+ ++ V F G CLG++LA +++ A + R +PG R+
Sbjct: 333 IFDARRNARHHVGFGHGIHQCLGQNLARAELEIALGGLFAR-----IPGLRL 379
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 81/216 (37%), Gaps = 42/216 (19%)
Query: 254 VESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALS 313
+ Y+ +E ++ P D LLS + D+DG+ L +A+ ++AG +T+ +
Sbjct: 187 LHGYLSDLLERKRTEPDDALLSSLLAVSDMDGDRLSQEELVAMAMLLLIAGHETTVNLIG 246
Query: 314 WFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLR 373
++ HP + + ++ S + +A+ E LR
Sbjct: 247 NGVLALLTHPDQRKLLAEDPSLI----------------------------SSAVEEFLR 278
Query: 374 LYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAE 433
V + ++DV G +PAG V + + R W+ E
Sbjct: 279 FDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDAD-------------WMP-E 324
Query: 434 GDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSA 469
DR + +D V F G CLG LA L+ + A
Sbjct: 325 PDRLDITRDASGGVFFGHGIHFCLGAQLARLEGRVA 360
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 80/216 (37%), Gaps = 42/216 (19%)
Query: 254 VESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALS 313
+ Y+ +E ++ P D LLS + D DG+ L +A+ ++AG +T+ +
Sbjct: 187 LHGYLSDLLERKRTEPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIG 246
Query: 314 WFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLR 373
++ HP + + ++ S + +A+ E LR
Sbjct: 247 NGVLALLTHPDQRKLLAEDPSLI----------------------------SSAVEEFLR 278
Query: 374 LYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAE 433
V + ++DV G +PAG V + + R W+ E
Sbjct: 279 FDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDAD-------------WMP-E 324
Query: 434 GDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSA 469
DR + +D V F G CLG LA L+ + A
Sbjct: 325 PDRLDITRDASGGVFFGHGIHFCLGAQLARLEGRVA 360
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 90/226 (39%), Gaps = 34/226 (15%)
Query: 263 EARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNH 322
EA K++ + DLL +K DG + + + + AG+ TS++ SW +M H
Sbjct: 228 EASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM-H 286
Query: 323 PCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEA-DKLIYLKAALAETLRLYPSVPED 381
P +K +D++ + E L +D D++ + + + E++R P +
Sbjct: 287 P-KNKKWLDKLHKEIDEFPAQ---------LNYDNVMDEMPFAERCVRESIRRDPPLLMV 336
Query: 382 FKYV-----VSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDR 436
+ V V V+P G + +++ +W PER +G
Sbjct: 337 MRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLW-------DPERDEKVDG-- 387
Query: 437 FEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLV 482
F+ F AG C+G+ A LQ+K+ + Y L+
Sbjct: 388 --------AFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLL 425
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 90/226 (39%), Gaps = 34/226 (15%)
Query: 263 EARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNH 322
EA K++ + DLL +K DG + + + + AG+ TS++ SW +M H
Sbjct: 237 EASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM-H 295
Query: 323 PCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEA-DKLIYLKAALAETLRLYPSVPED 381
P +K +D++ + E L +D D++ + + + E++R P +
Sbjct: 296 P-KNKKWLDKLHKEIDEFPAQ---------LNYDNVMDEMPFAERCVRESIRRDPPLLMV 345
Query: 382 FKYV-----VSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDR 436
+ V V V+P G + +++ +W PER +G
Sbjct: 346 MRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLW-------DPERDEKVDG-- 396
Query: 437 FEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLV 482
F+ F AG C+G+ A LQ+K+ + Y L+
Sbjct: 397 --------AFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLL 434
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 90/226 (39%), Gaps = 34/226 (15%)
Query: 263 EARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNH 322
EA K++ + DLL +K DG + + + + AG+ TS++ SW +M H
Sbjct: 222 EASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM-H 280
Query: 323 PCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEA-DKLIYLKAALAETLRLYPSVPED 381
P +K +D++ + E L +D D++ + + + E++R P +
Sbjct: 281 P-KNKKWLDKLHKEIDEFPAQ---------LNYDNVMDEMPFAERCVRESIRRDPPLLMV 330
Query: 382 FKYV-----VSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDR 436
+ V V V+P G + +++ +W PER +G
Sbjct: 331 MRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLW-------DPERDEKVDG-- 381
Query: 437 FEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLV 482
F+ F AG C+G+ A LQ+K+ + Y L+
Sbjct: 382 --------AFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLL 419
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 97/256 (37%), Gaps = 51/256 (19%)
Query: 254 VESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALS 313
+ Y+ I+ R+ +P +DL+S + + L ++ L ++AG +T+
Sbjct: 208 LRDYLRALIDERRRTPGEDLMSGLVAVEESGDQLTEDEIIATCNL-LLIAGHETT----- 261
Query: 314 WFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLR 373
LI N + + + + + GS +EE + +D +L+ A
Sbjct: 262 --VNLIANAALAMLRTPGQWAALAAD--GSRASAVIEETMRYDPPVQLVSRYAG------ 311
Query: 374 LYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAE 433
DD+ VP G T+ + + R TI G
Sbjct: 312 --------------DDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAP------------- 344
Query: 434 GDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY---RLSLVPGHRVEQK 490
DRF+P + + + F G CLG LA L+ A A+ R+ RLS P E K
Sbjct: 345 -DRFDPDRAQIRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGEP----EYK 399
Query: 491 MSLTLFMKHGLRVFLH 506
+LTL L + +H
Sbjct: 400 RNLTLRGMSTLSIAVH 415
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 49/232 (21%)
Query: 250 SLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSS 309
+L + S M + A++ +P DDL S ++ + +L + ++ + L V AG +T+
Sbjct: 190 TLTELASIMTDTVAAKRAAPGDDLTSALIQASENGDHLTDAEIVSTLQL-MVAAGHETT- 247
Query: 310 VALSWFFWLIMN---HPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKA 366
+S ++N HP EQ+ + VL S +W A
Sbjct: 248 --ISLIVNAVVNLSTHP--EQR-----ALVL-----SGEAEW----------------SA 277
Query: 367 ALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKP 426
+ ETLR ++DV +PAG + S ++GR
Sbjct: 278 VVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGR-------------D 324
Query: 427 ERWLSAEGDRFEPPK-DGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
ER DRF+ + G + ++F GP C G L+ ++ A A+ R+
Sbjct: 325 ERAHGPTADRFDLTRTSGNRHISFGHGPHVCPGAALSRMEAGVALPALYARF 376
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 87/236 (36%), Gaps = 48/236 (20%)
Query: 245 KRLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAG 304
+R+ L + +Y+ R+ P DDL+SR + +VDG + +LAG
Sbjct: 204 ERIADVLNPLTAYLKARCAERRADPGDDLISRLVLA-EVDGRALDDEEAANFSTALLLAG 262
Query: 305 RDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFD-EADKLIY 363
T++V L G+ V+ E P +D A+
Sbjct: 263 HITTTVLL-----------------------------GNIVRTLDEHPAHWDAAAEDPGR 293
Query: 364 LKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLE 423
+ A + E LR P P+ + + G +PA V + S R
Sbjct: 294 IPAIVEEVLRYRPPFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANR----------- 341
Query: 424 FKPERWLSAEGDRFEPPKD--GYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
+ + DRF+P + G ++F G CLG LA L+ + A ++ R+
Sbjct: 342 ---DSDAHDDPDRFDPSRKSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 87/236 (36%), Gaps = 48/236 (20%)
Query: 245 KRLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAG 304
+R+ L + +Y+ R+ P DDL+SR + +VDG + +LAG
Sbjct: 184 ERIADVLNPLTAYLKARCAERRADPGDDLISRLVLA-EVDGRALDDEEAANFSTALLLAG 242
Query: 305 RDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFD-EADKLIY 363
T++V L G+ V+ E P +D A+
Sbjct: 243 HITTTVLL-----------------------------GNIVRTLDEHPAHWDAAAEDPGR 273
Query: 364 LKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLE 423
+ A + E LR P P+ + + G +PA V + S R
Sbjct: 274 IPAIVEEVLRYRPPFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANR----------- 321
Query: 424 FKPERWLSAEGDRFEPPKD--GYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
+ + DRF+P + G ++F G CLG LA L+ + A ++ R+
Sbjct: 322 ---DSDAHDDPDRFDPSRKSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 45/226 (19%)
Query: 262 IEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMN 321
+ R+E P DDL+S+ + V GN+ +L + + + AGR+T++ ++ L+++
Sbjct: 209 VAERREEPRDDLISKLVTDHLVPGNVTTEQLLSTLGIT-INAGRETTTSMIALSTLLLLD 267
Query: 322 HPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPED 381
P E P E + L + AA+ E LR+ SV +
Sbjct: 268 RP--------------------------ELPAELRKDPDL--MPAAVDELLRVL-SVADS 298
Query: 382 FKY-VVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPP 440
V ++D+ G VPA G + + G + PE++ E F
Sbjct: 299 IPLRVAAEDIELSGRTVPADD---------GVIALLAGAN---HDPEQFDDPERVDFH-- 344
Query: 441 KDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLVPGHR 486
+ VAF G C+G+ LA L+++ A +L R + G R
Sbjct: 345 RTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRLAGER 390
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 85/236 (36%), Gaps = 43/236 (18%)
Query: 242 GAEKRLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKR-DVDGNLFPSAVLQRIALNF 300
GA ++ + +Y G IE R+ P+DD +S + DG+ + +
Sbjct: 187 GATTGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGADGDTAGTLSILAFTFTM 246
Query: 301 VLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADK 360
V AG DT + L L+ P D+ +L + G
Sbjct: 247 VTAGNDTVTGMLGGSMPLLHRRP-------DQRRLLLDDPEG------------------ 281
Query: 361 LIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGED 420
+ A+ E LRL V + + DV T +PAG V S R + +G D
Sbjct: 282 ---IPDAVEELLRLTSPV-QGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPD 337
Query: 421 CLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLR 476
E R P++ + F+ G CLG A +Q + A + +L R
Sbjct: 338 AAELDVTRC----------PRN---ILTFSHGAHHCLGAAAARMQCRVALTELLAR 380
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 87/222 (39%), Gaps = 26/222 (11%)
Query: 263 EARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNH 322
E K+S + DLLS + DG + + + + AG+ TSS+ +W +M+
Sbjct: 224 EVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHP 283
Query: 323 PCVE--QKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPE 380
V+ + + EI + +NV D++ + + E++R P +
Sbjct: 284 ANVKHLEALRKEIEEFPAQLNYNNV------------MDEMPFAERCARESIRRDPPLLM 331
Query: 381 DFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPP 440
+ V++D V VP G + S + + E P RW ++ E
Sbjct: 332 LMRKVMAD-VKVGSYVVPKGDIIACSPLLSHHDEEAFPE------PRRWDPERDEKVE-- 382
Query: 441 KDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLV 482
F+ F AG C+G+ LQ+K+ + Y L+
Sbjct: 383 ---GAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLL 421
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 87/222 (39%), Gaps = 26/222 (11%)
Query: 263 EARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNH 322
E K+S + DLLS + DG + + + + AG+ TSS+ +W +M+
Sbjct: 225 EVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHP 284
Query: 323 PCVE--QKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPE 380
V+ + + EI + +NV D++ + + E++R P +
Sbjct: 285 ANVKHLEALRKEIEEFPAQLNYNNV------------MDEMPFAERCARESIRRDPPLLM 332
Query: 381 DFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPP 440
+ V++D V VP G + S + + E P RW ++ E
Sbjct: 333 LMRKVMAD-VKVGSYVVPKGDIIACSPLLSHHDEEAFPE------PRRWDPERDEKVE-- 383
Query: 441 KDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLV 482
F+ F AG C+G+ LQ+K+ + Y L+
Sbjct: 384 ---GAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLL 422
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 87/222 (39%), Gaps = 26/222 (11%)
Query: 263 EARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNH 322
E K+S + DLLS + DG + + + + AG+ TSS+ +W +M+
Sbjct: 223 EVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHP 282
Query: 323 PCVE--QKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPE 380
V+ + + EI + +NV D++ + + E++R P +
Sbjct: 283 ANVKHLEALRKEIEEFPAQLNYNNV------------MDEMPFAERCARESIRRDPPLLM 330
Query: 381 DFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPP 440
+ V++D V VP G + S + + E P RW ++ E
Sbjct: 331 LMRKVMAD-VKVGSYVVPKGDIIACSPLLSHHDEEAFPE------PRRWDPERDEKVE-- 381
Query: 441 KDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLV 482
F+ F AG C+G+ LQ+K+ + Y L+
Sbjct: 382 ---GAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLL 420
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 87/222 (39%), Gaps = 26/222 (11%)
Query: 263 EARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNH 322
E K+S + DLLS + DG + + + + AG+ TSS+ +W +M+
Sbjct: 237 EVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHP 296
Query: 323 PCVE--QKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPE 380
V+ + + EI + +NV D++ + + E++R P +
Sbjct: 297 ANVKHLEALRKEIEEFPAQLNYNNV------------MDEMPFAERCARESIRRDPPLLM 344
Query: 381 DFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPP 440
+ V++D V VP G + S + + E P RW ++ E
Sbjct: 345 LMRKVMAD-VKVGSYVVPKGDIIACSPLLSHHDEEAFPE------PRRWDPERDEKVE-- 395
Query: 441 KDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLV 482
F+ F AG C+G+ LQ+K+ + Y L+
Sbjct: 396 ---GAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLL 434
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 87/222 (39%), Gaps = 26/222 (11%)
Query: 263 EARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNH 322
E K+S + DLLS + DG + + + + AG+ TSS+ +W +M+
Sbjct: 224 EVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHP 283
Query: 323 PCVE--QKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPE 380
V+ + + EI + +NV D++ + + E++R P +
Sbjct: 284 ANVKHLEALRKEIEEFPAQLNYNNV------------MDEMPFAERCARESIRRDPPLLM 331
Query: 381 DFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPP 440
+ V++D V VP G + S + + E P RW ++ E
Sbjct: 332 LMRKVMAD-VKVGSYVVPKGDIIACSPLLSHHDEEAFPE------PRRWDPERDEKVE-- 382
Query: 441 KDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLV 482
F+ F AG C+G+ LQ+K+ + Y L+
Sbjct: 383 ---GAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLL 421
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 84/236 (35%), Gaps = 43/236 (18%)
Query: 242 GAEKRLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKR-DVDGNLFPSAVLQRIALNF 300
GA ++ + +Y G IE R+ P+DD +S + DG+ + +
Sbjct: 188 GATTGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGADGDTAGTLSILAFTFTM 247
Query: 301 VLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADK 360
V G DT + L L+ P D+ +L + G
Sbjct: 248 VTGGNDTVTGMLGGSMPLLHRRP-------DQRRLLLDDPEG------------------ 282
Query: 361 LIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGED 420
+ A+ E LRL V + + DV T +PAG V S R + +G D
Sbjct: 283 ---IPDAVEELLRLTSPV-QGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPD 338
Query: 421 CLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLR 476
E R P++ + F+ G CLG A +Q + A + +L R
Sbjct: 339 AAELDVTRC----------PRN---ILTFSHGAHHCLGAAAARMQCRVALTELLAR 381
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 84/236 (35%), Gaps = 43/236 (18%)
Query: 242 GAEKRLKKSLEVVESYMDGAIEARKESPSDDLLSRFMKKR-DVDGNLFPSAVLQRIALNF 300
GA ++ + +Y G IE R+ P+DD +S + DG+ + +
Sbjct: 187 GATTGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGADGDTAGTLSILAFTFTM 246
Query: 301 VLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADK 360
V G DT + L L+ P D+ +L + G
Sbjct: 247 VTGGNDTVTGMLGGSMPLLHRRP-------DQRRLLLDDPEG------------------ 281
Query: 361 LIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGED 420
+ A+ E LRL V + + DV T +PAG V S R + +G D
Sbjct: 282 ---IPDAVEELLRLTSPV-QGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPD 337
Query: 421 CLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLR 476
E R P++ + F+ G CLG A +Q + A + +L R
Sbjct: 338 AAELDVTRC----------PRN---ILTFSHGAHHCLGAAAARMQCRVALTELLAR 380
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 87/224 (38%), Gaps = 26/224 (11%)
Query: 261 AIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIM 320
A K+S + DLLS + DG + + + + AG+ TSS+ +W +M
Sbjct: 235 AAAVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM 294
Query: 321 NHPCVE--QKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSV 378
+ V+ + + EI + +NV D++ + + E++R P +
Sbjct: 295 HPANVKHLEALRKEIEEFPAQLNYNNV------------MDEMPFAERCARESIRRDPPL 342
Query: 379 PEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFE 438
+ V++D V VP G + S + + E P RW ++ E
Sbjct: 343 LMLMRKVMAD-VKVGSYVVPKGDIIACSPLLSHHDEEAFPE------PRRWDPERDEKVE 395
Query: 439 PPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLV 482
F+ F AG C+G+ LQ+K+ + Y L+
Sbjct: 396 -----GAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLL 434
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 85/226 (37%), Gaps = 33/226 (14%)
Query: 263 EARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMN- 321
EA+K++ + DLL+ + DG + + + + AG+ TS++ +W +M+
Sbjct: 223 EAQKDTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDP 282
Query: 322 ----HPCVEQKIVDEISTVLKETRGSNVKKWMEE-PLEFDEADKLIYLKAALAETLRLYP 376
H + +DE L N MEE P A + I L +R
Sbjct: 283 RNKRHLAKLHQEIDEFPAQL------NYDNVMEEMPFAEQCARESIRRDPPLVMLMRKVL 336
Query: 377 SVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDR 436
+ KYVV P+G + +++ W PER +
Sbjct: 337 KPVQVGKYVV-----PEGDIIACSPLLSHQDEEAFPNPREW-------NPERNMKL---- 380
Query: 437 FEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYRLSLV 482
DG F F AG C+G+ LQ+K+ + VL Y L+
Sbjct: 381 ----VDG-AFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDFELL 421
>pdb|3OO3|A Chain A, Crystal Structure Of The Orf6 (Cyp165d3) Monooxygenase
Involved In Teicoplanin Biosynthesis
Length = 384
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 19/119 (15%)
Query: 359 DKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWG 418
+K + +A E LR V V DV G + AG +T S+ + R
Sbjct: 254 EKPELIDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR------ 307
Query: 419 EDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
A GDRF+ ++ +AF G C+G LA LQ++ A AV+ R+
Sbjct: 308 -------------APGDRFDITREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRF 353
>pdb|3O1A|A Chain A, Structure Of Oxye (Cyp165d3), A Cytochrome P450 Involved
In Teicoplanin Biosynthesis
Length = 417
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 19/114 (16%)
Query: 364 LKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLE 423
+ +A E LR V V DV G + AG +T S+ + R
Sbjct: 292 IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR----------- 340
Query: 424 FKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
A GDRF+ ++ +AF G C+G LA LQ++ A AV+ R+
Sbjct: 341 --------APGDRFDITREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRF 386
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 60/164 (36%), Gaps = 26/164 (15%)
Query: 325 VEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKY 384
V ++ +EI +V+K G L +K+ K+ + E LR P V +
Sbjct: 317 VHNRLAEEIRSVIKSNGGE---------LTMGAIEKMELTKSVVYECLRFEPPVTAQYGR 367
Query: 385 VVSDDVLP--DGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKD 442
D V+ D F + Y + + EF PER++ EG++
Sbjct: 368 AKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKL----- 422
Query: 443 GYKFVAFNAGPRT---------CLGKDLAYLQMKSAASAVLLRY 477
+ V ++ GP T C GKD L + + RY
Sbjct: 423 -LRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRY 465
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 60/164 (36%), Gaps = 26/164 (15%)
Query: 325 VEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKY 384
V ++ +EI +V+K G L +K+ K+ + E LR P V +
Sbjct: 317 VHNRLAEEIRSVIKSNGGE---------LTMGAIEKMELTKSVVYECLRFEPPVTAQYGR 367
Query: 385 VVSDDVLP--DGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKD 442
D V+ D F + Y + + EF PER++ EG++
Sbjct: 368 AKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKL----- 422
Query: 443 GYKFVAFNAGPRT---------CLGKDLAYLQMKSAASAVLLRY 477
+ V ++ GP T C GKD L + + RY
Sbjct: 423 -LRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRY 465
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 125/337 (37%), Gaps = 79/337 (23%)
Query: 134 RKTAALEFTTRTLRQAMARWVNRTIKNRLWRILDQAAEQNFPVDLQDLLLRLTFDNICGL 193
RK A EFT R + QA+ + R + L D + PVDL +
Sbjct: 99 RKLLAKEFTVRRM-QALRPNIQRIVDEHL----DAIEARGGPVDLVKTFANAVPSMVISD 153
Query: 194 TFGKDPETLSP--ELPENPFSIAFDTA-TEATLQRLLYPGFLWRLEKIFGIGAEKRLKKS 250
FG E + ++ E + D A TEA RL G L++L
Sbjct: 154 LFGVPVERRAEFQDIAEAMMRVDQDAAATEAAGMRL--GGLLYQL--------------- 196
Query: 251 LEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSV 310
++ R+ +P DDL+S + D DG + L A ++A DT++
Sbjct: 197 -----------VQERRANPGDDLISALITTEDPDG-VVDDMFLMNAAGTLLIAAHDTTAC 244
Query: 311 ALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAE 370
+ L+++ P D+++ + ++ S V +EE L YL
Sbjct: 245 MIGLGTALLLDSP-------DQLALLREDP--SLVGNAVEELLR--------YL------ 281
Query: 371 TLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWL 430
T+ + + V + DV G + G V + + +F P
Sbjct: 282 TIGQFGG-----ERVATRDVELGGVRIAKGEQVVAHVLAA------------DFDP--AF 322
Query: 431 SAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMK 467
E +RF+ + +AF G C+G+ LA ++++
Sbjct: 323 VEEPERFDITRRPAPHLAFGFGAHQCIGQQLARIELQ 359
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 125/337 (37%), Gaps = 79/337 (23%)
Query: 134 RKTAALEFTTRTLRQAMARWVNRTIKNRLWRILDQAAEQNFPVDLQDLLLRLTFDNICGL 193
RK A EFT R + QA+ + R + L D + PVDL +
Sbjct: 99 RKLLAKEFTVRRM-QALRPNIQRIVDEHL----DAIEARGGPVDLVKTFANAVPSMVISD 153
Query: 194 TFGKDPETLSP--ELPENPFSIAFDTA-TEATLQRLLYPGFLWRLEKIFGIGAEKRLKKS 250
FG E + ++ E + D A TEA RL G L++L
Sbjct: 154 LFGVPVERRAEFQDIAEAMMRVDQDAAATEAAGMRL--GGLLYQL--------------- 196
Query: 251 LEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSV 310
++ R+ +P DDL+S + D DG + L A ++A DT++
Sbjct: 197 -----------VQERRANPGDDLISALITTEDPDG-VVDDMFLMNAAGTLLIAAHDTTAC 244
Query: 311 ALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAE 370
+ L+++ P D+++ + ++ S V +EE L YL
Sbjct: 245 MIGLGTALLLDSP-------DQLALLREDP--SLVGNAVEELLR--------YL------ 281
Query: 371 TLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWL 430
T+ + + V + DV G + G V + + +F P
Sbjct: 282 TIGQFGG-----ERVATRDVELGGVRIAKGEQVVAHVLAA------------DFDP--AF 322
Query: 431 SAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMK 467
E +RF+ + +AF G C+G+ LA ++++
Sbjct: 323 VEEPERFDITRRPAPHLAFGFGAHQCIGQQLARIELQ 359
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 125/337 (37%), Gaps = 79/337 (23%)
Query: 134 RKTAALEFTTRTLRQAMARWVNRTIKNRLWRILDQAAEQNFPVDLQDLLLRLTFDNICGL 193
RK A EFT R + QA+ + R + L D + PVDL +
Sbjct: 99 RKLLAKEFTVRRM-QALRPNIQRIVDEHL----DAIEARGGPVDLVKTFANAVPSMVISD 153
Query: 194 TFGKDPETLSP--ELPENPFSIAFDTA-TEATLQRLLYPGFLWRLEKIFGIGAEKRLKKS 250
FG E + ++ E + D A TEA RL G L++L
Sbjct: 154 LFGVPVERRAEFQDIAEAMMRVDQDAAATEAAGMRL--GGLLYQL--------------- 196
Query: 251 LEVVESYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSV 310
++ R+ +P DDL+S + D DG + L A ++A DT++
Sbjct: 197 -----------VQERRANPGDDLISALITTEDPDG-VVDDMFLMNAAGTLLIAAHDTTAC 244
Query: 311 ALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAE 370
+ L+++ P D+++ + ++ S V +EE L YL
Sbjct: 245 MIGLGTALLLDSP-------DQLALLREDP--SLVGNAVEELLR--------YL------ 281
Query: 371 TLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWL 430
T+ + + V + DV G + G V + + +F P
Sbjct: 282 TIGQFGG-----ERVATRDVELGGVRIAKGEQVVAHVLAA------------DFDP--AF 322
Query: 431 SAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMK 467
E +RF+ + +AF G C+G+ LA ++++
Sbjct: 323 VEEPERFDITRRPAPHLAFGFGAHQCIGQQLARIELQ 359
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 16/117 (13%)
Query: 362 IYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDC 421
+YLKA + E LR P V + L D T + G V I S R + ++
Sbjct: 239 LYLKA-IEEALRYSPPVMRTVRKTKERVKLGDQT-IEEGEYVRVWIASANRDEEVF---- 292
Query: 422 LEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYR 478
+G++F P ++ ++F +G CLG LA L+ + A R+R
Sbjct: 293 ----------HDGEKFIPDRNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFR 339
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 16/117 (13%)
Query: 362 IYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDC 421
+YLKA + E LR P V + L D T + G V I S R + ++
Sbjct: 239 LYLKA-IEEALRYSPPVMRTVRKTKERVKLGDQT-IEEGEYVRVWIASANRDEEVF---- 292
Query: 422 LEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRYR 478
+G++F P ++ ++F +G CLG LA L+ + A R+R
Sbjct: 293 ----------HDGEKFIPDRNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFR 339
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 91/250 (36%), Gaps = 50/250 (20%)
Query: 233 WRLEKIFGIGA---EKRLKKSLEVVESYMD---GAIEARKESPSDDLLSRFMKKRDVDGN 286
W + + G+ + E ++K ++ +Y + I R+ P+DDL S + +V+G
Sbjct: 158 WSDDLVCGLSSHVDEAAIQKLMDTFAAYTEFTKDVITKRRAEPTDDLFSVLVNS-EVEGQ 216
Query: 287 LFPSAVLQRIALNFVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVK 346
+ L ++ G +T+ LS ++ H +V ++
Sbjct: 217 RMSDDEIVFETLLILIGGDETTRHTLSGGTEQLLRHRDQWDALVADVD------------ 264
Query: 347 KWMEEPLEFDEADKLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYS 406
L A+ E LR V + + +D V GT + AG +
Sbjct: 265 ----------------LLPGAIEEMLRWTSPVKNMCRTLTADTVF-HGTELRAGEKIMLM 307
Query: 407 IYSVGRMKTIWGEDCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQM 466
S ++++G+ D F ++ VAF G CLG LA L++
Sbjct: 308 FESANFDESVFGD--------------PDNFRIDRNPNSHVAFGFGTHFCLGNQLARLEL 353
Query: 467 KSAASAVLLR 476
+ VL R
Sbjct: 354 RLMTERVLRR 363
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 433 EGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLR 476
E +F+P + + +AF AG CLG LA L+M+ +L R
Sbjct: 376 EPRKFDPTRPANRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDR 419
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 89/222 (40%), Gaps = 43/222 (19%)
Query: 257 YMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFF 316
Y+ +E R P DD++S+ ++ GN+ S +Q IA ++AG T ++
Sbjct: 195 YLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVAGNATMVNMIALGV 253
Query: 317 WLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYP 376
+ HP D+++ + + S +++EE + A +ALA
Sbjct: 254 ATLAQHP-------DQLAQL--KANPSLAPQFVEELCRYHTA-------SALA------- 290
Query: 377 SVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPER-WLSAEGD 435
K +DV+ V A + S S R + ++ E+ EF R W
Sbjct: 291 -----IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKW------ 338
Query: 436 RFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
PP+D + F G C+ + LA ++ + S + ++
Sbjct: 339 ---PPQDP---LGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 89/222 (40%), Gaps = 43/222 (19%)
Query: 257 YMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFF 316
Y+ +E R P DD++S+ ++ GN+ S +Q IA ++AG T ++
Sbjct: 193 YLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVAGNATMVNMIALGV 251
Query: 317 WLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYP 376
+ HP D+++ + + S +++EE + A +ALA
Sbjct: 252 ATLAQHP-------DQLAQL--KANPSLAPQFVEELCRYHTA-------SALA------- 288
Query: 377 SVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPER-WLSAEGD 435
K +DV+ V A + S S R + ++ E+ EF R W
Sbjct: 289 -----IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKW------ 336
Query: 436 RFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
PP+D + F G C+ + LA ++ + S + ++
Sbjct: 337 ---PPQDP---LGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 89/222 (40%), Gaps = 43/222 (19%)
Query: 257 YMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFF 316
Y+ +E R P DD++S+ ++ GN+ S +Q IA ++AG T ++
Sbjct: 194 YLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVAGNATMVNMIALGV 252
Query: 317 WLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYP 376
+ HP D+++ + + S +++EE + A +ALA
Sbjct: 253 ATLAQHP-------DQLAQL--KANPSLAPQFVEELCRYHTA-------SALA------- 289
Query: 377 SVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPER-WLSAEGD 435
K +DV+ V A + S S R + ++ E+ EF R W
Sbjct: 290 -----IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKW------ 337
Query: 436 RFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
PP+D + F G C+ + LA ++ + S + ++
Sbjct: 338 ---PPQDP---LGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 89/222 (40%), Gaps = 43/222 (19%)
Query: 257 YMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFF 316
Y+ +E R P DD++S+ ++ GN+ S +Q IA ++AG T ++
Sbjct: 193 YLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVAGNATMVNMIALGV 251
Query: 317 WLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYP 376
+ HP D+++ + + S +++EE + A +ALA
Sbjct: 252 ATLAQHP-------DQLAQL--KANPSLAPQFVEELCRYHTA-------SALA------- 288
Query: 377 SVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPER-WLSAEGD 435
K +DV+ V A + S S R + ++ E+ EF R W
Sbjct: 289 -----IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKW------ 336
Query: 436 RFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
PP+D + F G C+ + LA ++ + S + ++
Sbjct: 337 ---PPQDP---LGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 89/222 (40%), Gaps = 43/222 (19%)
Query: 257 YMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFF 316
Y+ +E R P DD++S+ ++ GN+ S +Q IA ++AG T ++
Sbjct: 194 YLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVAGNATMVNMIALGV 252
Query: 317 WLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYP 376
+ HP D+++ + + S +++EE + A +ALA
Sbjct: 253 ATLAQHP-------DQLAQL--KANPSLAPQFVEELCRYHTA-------SALA------- 289
Query: 377 SVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPER-WLSAEGD 435
K +DV+ V A + S S R + ++ E+ EF R W
Sbjct: 290 -----IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKW------ 337
Query: 436 RFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
PP+D + F G C+ + LA ++ + S + ++
Sbjct: 338 ---PPQDP---LGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 43/222 (19%)
Query: 257 YMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFF 316
Y+ +E R P DD++S+ ++ GN+ S +Q IA ++AG T ++
Sbjct: 194 YLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVAGNATMVNMIALGV 252
Query: 317 WLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYP 376
+ HP D+++ + + S +++E E R +
Sbjct: 253 ATLAQHP-------DQLAQL--KANPSLAPQFVE-------------------ELCRYHT 284
Query: 377 SVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPER-WLSAEGD 435
+V K +DV+ V A + S S R + ++ E+ EF R W
Sbjct: 285 AVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKW------ 337
Query: 436 RFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
PP+D + F G C+ + LA ++ + S + ++
Sbjct: 338 ---PPQDP---LGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 43/222 (19%)
Query: 257 YMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFF 316
Y+ +E R P DD++S+ ++ GN+ S +Q IA ++AG T ++
Sbjct: 193 YLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVAGNATMVNMIALGV 251
Query: 317 WLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYP 376
+ HP D+++ + + S +++E E R +
Sbjct: 252 ATLAQHP-------DQLAQL--KANPSLAPQFVE-------------------ELCRYHT 283
Query: 377 SVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPER-WLSAEGD 435
+V K +DV+ V A + S S R + ++ E+ EF R W
Sbjct: 284 AVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKW------ 336
Query: 436 RFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
PP+D + F G C+ + LA ++ + S + ++
Sbjct: 337 ---PPQDP---LGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 88/222 (39%), Gaps = 42/222 (18%)
Query: 256 SYMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWF 315
+ + G ++ R+ +P ++ + + + + DG+ + L + + AG DT+ +++
Sbjct: 207 ALLHGVLDERRRNPLENDVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFA 266
Query: 316 FWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLY 375
++ P E ++K G ++ ++E L FD ++ ++ A
Sbjct: 267 VLNLLRSP--------EALELVKAEPGL-MRNALDEVLRFDNILRIGTVRFAR------- 310
Query: 376 PSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSAEGD 435
+D +Y G + G V I S R T++ +P D
Sbjct: 311 ----QDLEYC--------GASIKKGEMVFLLIPSALRDGTVFS------RP--------D 344
Query: 436 RFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
F+ +D +A+ GP C G LA L+ + A + R+
Sbjct: 345 VFDVRRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 88/222 (39%), Gaps = 43/222 (19%)
Query: 257 YMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFF 316
Y+ +E R P DD++S+ ++ GN+ S +Q IA ++AG T ++
Sbjct: 193 YLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVAGNATMVNMIALGV 251
Query: 317 WLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYP 376
+ HP D+++ + + S +++EE + A ALA
Sbjct: 252 ATLAQHP-------DQLAQL--KANPSLAPQFVEELCRYHTA-------TALA------- 288
Query: 377 SVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPER-WLSAEGD 435
K +DV+ V A + S S R + ++ E+ EF R W
Sbjct: 289 -----IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKW------ 336
Query: 436 RFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
PP+D + F G C+ + LA ++ + S + ++
Sbjct: 337 ---PPQDP---LGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 88/222 (39%), Gaps = 43/222 (19%)
Query: 257 YMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFF 316
Y+ +E R P DD++S+ ++ GN+ S +Q IA ++AG T ++
Sbjct: 194 YLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVAGNATMVNMIALGV 252
Query: 317 WLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYP 376
+ HP D+++ + + S +++EE + A ALA
Sbjct: 253 ATLAQHP-------DQLAQL--KANPSLAPQFVEELCRYHTA-------TALA------- 289
Query: 377 SVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPER-WLSAEGD 435
K +DV+ V A + S S R + ++ E+ EF R W
Sbjct: 290 -----IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKW------ 337
Query: 436 RFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
PP+D + F G C+ + LA ++ + S + ++
Sbjct: 338 ---PPQDP---LGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|2Q18|X Chain X, 2-Keto-3-Deoxy-D-Arabinonate Dehydratase
pdb|2Q19|X Chain X, 2-keto-3-deoxy-d-arabinonate Dehydratase Apo Form
pdb|2Q1A|X Chain X, 2-Keto-3-Deoxy-D-Arabinonate Dehydratase Complexed With
Magnesium And 2-Oxobutyrate
pdb|2Q1C|X Chain X, 2-Keto-3-Deoxy-D-Arabinonate Dehydratase Complexed With
Calcium And 2- Oxobutyrate
pdb|2Q1D|X Chain X, 2-Keto-3-Deoxy-D-Arabinonate Dehydratase Complexed With
Magnesium And 2,5-Dioxopentanoate
pdb|3BQB|A Chain A, Hexagonal Kristal Form Of 2-Keto-3-Deoxyarabinonate
Dehydratase
pdb|3BQB|X Chain X, Hexagonal Kristal Form Of 2-Keto-3-Deoxyarabinonate
Dehydratase
pdb|3BQB|Z Chain Z, Hexagonal Kristal Form Of 2-Keto-3-Deoxyarabinonate
Dehydratase
pdb|3BQB|Y Chain Y, Hexagonal Kristal Form Of 2-Keto-3-Deoxyarabinonate
Dehydratase
Length = 293
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 371 TLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEF 424
T ++ + E +Y++ D+ +PDGT + G+ + GR K + ED +E
Sbjct: 226 TNKMRRKIEEQIQYLIRDNPIPDGTILTTGTAIV-----PGRDKGLKDEDIVEI 274
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 47/237 (19%)
Query: 243 AEKRLKKSLEVVESYMD---GAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALN 299
+++ + +++ +Y D I AR+ P+DDL+S + +VDG L L
Sbjct: 168 SQEDFQITMDAFAAYNDFTRATIAARRADPTDDLVSVLVSS-EVDGERLSDDELVMETLL 226
Query: 300 FVLAGRDTSSVALSWFFWLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEAD 359
++ G +T+ LS EQ + N +W + L+ D +
Sbjct: 227 ILIGGDETTRHTLSG---------GTEQLL-------------RNRDQW--DLLQRDPS- 261
Query: 360 KLIYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGE 419
L A+ E LR V ++ V++ D GT + AG + S + ++ E
Sbjct: 262 ---LLPGAIEEMLRWTAPV-KNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCE 317
Query: 420 DCLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLR 476
PE+ F+ ++ +AF G CLG LA L++ VL R
Sbjct: 318 ------PEK--------FDVQRNPNSHLAFGFGTHFCLGNQLARLELSLMTERVLRR 360
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 43/222 (19%)
Query: 257 YMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFF 316
Y+ +E R P DD++S+ ++ GN+ S +Q IA ++AG ++
Sbjct: 193 YLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVAGNANMVNMIALGV 251
Query: 317 WLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYP 376
+ HP D+++ + + S +++EE + A +ALA
Sbjct: 252 ATLAQHP-------DQLAQL--KANPSLAPQFVEELCRYHTA-------SALA------- 288
Query: 377 SVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPER-WLSAEGD 435
K +DV+ V A + S S R + ++ E+ EF R W
Sbjct: 289 -----IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKW------ 336
Query: 436 RFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
PP+D + F G C+ + LA ++ + S + ++
Sbjct: 337 ---PPQDP---LGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 43/222 (19%)
Query: 257 YMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFF 316
Y+ +E R P DD++S+ ++ GN+ S +Q IA ++AG ++
Sbjct: 193 YLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVAGNAAMVNMIALGV 251
Query: 317 WLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYP 376
+ HP D+++ + + S +++EE + A +ALA
Sbjct: 252 ATLAQHP-------DQLAQL--KANPSLAPQFVEELCRYHTA-------SALA------- 288
Query: 377 SVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPER-WLSAEGD 435
K +DV+ V A + S S R + ++ E+ EF R W
Sbjct: 289 -----IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKW------ 336
Query: 436 RFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
PP+D + F G C+ + LA ++ + S + ++
Sbjct: 337 ---PPQDP---LGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 43/222 (19%)
Query: 257 YMDGAIEARKESPSDDLLSRFMKKRDVDGNLFPSAVLQRIALNFVLAGRDTSSVALSWFF 316
Y+ +E R P DD++S+ ++ GN+ S +Q IA ++AG ++
Sbjct: 193 YLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVAGNAVMVNMIALGV 251
Query: 317 WLIMNHPCVEQKIVDEISTVLKETRGSNVKKWMEEPLEFDEADKLIYLKAALAETLRLYP 376
+ HP D+++ + + S +++EE + A +ALA
Sbjct: 252 ATLAQHP-------DQLAQL--KANPSLAPQFVEELCRYHTA-------SALA------- 288
Query: 377 SVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPER-WLSAEGD 435
K +DV+ V A + S S R + ++ E+ EF R W
Sbjct: 289 -----IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKW------ 336
Query: 436 RFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSAASAVLLRY 477
PP+D + F G C+ + LA ++ + S + ++
Sbjct: 337 ---PPQDP---LGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|3LNI|A Chain A, Crystal Structure Of E-Cadherin Ec12 E89a
pdb|3LNI|B Chain B, Crystal Structure Of E-Cadherin Ec12 E89a
Length = 213
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 90 PKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQA 149
PKN+ I R + K F+ + GQG ++I+R+T L+ T R+A
Sbjct: 18 PKNLVQIKSNRDKE-------TKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 70
Query: 150 MARWV 154
+A+++
Sbjct: 71 IAKYI 75
>pdb|3LNF|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14ew2a
pdb|3LNF|B Chain B, Crystal Structure Of E-Cadherin Ec12 K14ew2a
Length = 213
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 90 PKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQA 149
PKN+ I R + K F+ + GQG ++I+R+T L+ T R+A
Sbjct: 18 PKNLVQIKSNRDKE-------TKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 70
Query: 150 MARWV 154
+A+++
Sbjct: 71 IAKYI 75
>pdb|3LNH|A Chain A, Crystal Structure Of E-Cadherin Ec12 W2a
pdb|3LNH|B Chain B, Crystal Structure Of E-Cadherin Ec12 W2a
Length = 213
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 90 PKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQA 149
PKN+ I R + K F+ + GQG ++I+R+T L+ T R+A
Sbjct: 18 PKNLVQIKSNRDKE-------TKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 70
Query: 150 MARWV 154
+A+++
Sbjct: 71 IAKYI 75
>pdb|1Q1P|A Chain A, E-Cadherin Activation
Length = 212
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 90 PKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQA 149
PKN+ I R + K F+ + GQG ++I+R+T L+ T R+A
Sbjct: 17 PKNLVQIKSNRDKE-------TKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 69
Query: 150 MARWV 154
+A+++
Sbjct: 70 IAKYI 74
>pdb|1EDH|A Chain A, E-Cadherin Domains 1 And 2 In Complex With Calcium
pdb|1EDH|B Chain B, E-Cadherin Domains 1 And 2 In Complex With Calcium
Length = 226
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 90 PKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQA 149
PKN+ I R + K F+ + GQG ++I+R+T L+ T R+A
Sbjct: 20 PKNLVQIKSNRDKE-------TKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 72
Query: 150 MARWV 154
+A+++
Sbjct: 73 IAKYI 77
>pdb|2QVF|B Chain B, Mouse E-cadherin Domains 1,2
Length = 213
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 90 PKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQA 149
PKN+ I R + K F+ + GQG ++I+R+T L+ T R+A
Sbjct: 18 PKNLVQIKSNRDKE-------TKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 70
Query: 150 MARWV 154
+A+++
Sbjct: 71 IAKYI 75
>pdb|3LNG|A Chain A, Crystal Structure Of E-Cadherin Ec12 Aa Extension
pdb|3LNG|B Chain B, Crystal Structure Of E-Cadherin Ec12 Aa Extension
Length = 215
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 90 PKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQA 149
PKN+ I R + K F+ + GQG ++I+R+T L+ T R+A
Sbjct: 20 PKNLVQIKSNRDKE-------TKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 72
Query: 150 MARWV 154
+A+++
Sbjct: 73 IAKYI 77
>pdb|3LNE|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14e
Length = 213
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 90 PKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQA 149
PKN+ I R + K F+ + GQG ++I+R+T L+ T R+A
Sbjct: 18 PKNLVQIKSNRDKE-------TKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 70
Query: 150 MARWV 154
+A+++
Sbjct: 71 IAKYI 75
>pdb|3Q2N|A Chain A, Mouse E-Cadherin Ec1-2 L175d Mutant
pdb|3Q2N|B Chain B, Mouse E-Cadherin Ec1-2 L175d Mutant
Length = 213
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 90 PKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQA 149
PKN+ I R + K F+ + GQG ++I+R+T L+ T R+A
Sbjct: 18 PKNLVQIKSNRDKE-------TKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 70
Query: 150 MARWV 154
+A+++
Sbjct: 71 IAKYI 75
>pdb|3Q2L|A Chain A, Mouse E-Cadherin Ec1-2 V81d Mutant
pdb|3Q2L|B Chain B, Mouse E-Cadherin Ec1-2 V81d Mutant
Length = 213
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 90 PKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQA 149
PKN+ I R + K F+ + GQG ++I+R+T L+ T R+A
Sbjct: 18 PKNLVQIKSNRDKE-------TKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 70
Query: 150 MARWV 154
+A+++
Sbjct: 71 IAKYI 75
>pdb|1FF5|A Chain A, Structure Of E-Cadherin Double Domain
pdb|1FF5|B Chain B, Structure Of E-Cadherin Double Domain
Length = 219
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 90 PKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQA 149
PKN+ I R + K F+ + GQG ++I+R+T L+ T R+A
Sbjct: 19 PKNLVQIKSNRDKE-------TKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 71
Query: 150 MARWV 154
+A+++
Sbjct: 72 IAKYI 76
>pdb|3QRB|A Chain A, Crystal Structure Of E-Cadherin Ec1-2 P5a P6a
pdb|3QRB|B Chain B, Crystal Structure Of E-Cadherin Ec1-2 P5a P6a
Length = 213
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 90 PKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQA 149
PKN+ I R + K F+ + GQG ++I+R+T L+ T R+A
Sbjct: 18 PKNLVQIKSNRDKE-------TKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 70
Query: 150 MARWV 154
+A+++
Sbjct: 71 IAKYI 75
>pdb|3Q2V|A Chain A, Crystal Structure Of Mouse E-Cadherin Ectodomain
pdb|3Q2V|B Chain B, Crystal Structure Of Mouse E-Cadherin Ectodomain
Length = 550
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 90 PKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQA 149
PKN+ I R + K F+ + GQG ++I+R+T L+ T R+A
Sbjct: 18 PKNLVQIKSNRDKE-------TKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 70
Query: 150 MARWV 154
+A+++
Sbjct: 71 IAKYI 75
>pdb|1SUH|A Chain A, Amino-Terminal Domain Of Epithelial Cadherin In The
Calcium Bound State, Nmr, 20 Structures
Length = 146
Score = 29.3 bits (64), Expect = 5.0, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 90 PKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQA 149
PKN+ I R + K F+ + GQG ++I+R+T L+ T R+A
Sbjct: 20 PKNLVQIKSNRDKE-------TKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 72
Query: 150 MARWV 154
+A+++
Sbjct: 73 IAKYI 77
>pdb|2OMW|B Chain B, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 105
Score = 29.3 bits (64), Expect = 5.8, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 90 PKNIEHILRTRFENYPKGPTWQKAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQA 149
PKN+ I R + K F+ + GQG ++I+R+T L+ T R+A
Sbjct: 22 PKNLVQIKSNRDKE-------TKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA 74
Query: 150 MARWV 154
+A+++
Sbjct: 75 IAKYI 79
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 91/228 (39%), Gaps = 45/228 (19%)
Query: 251 LEVVESYMDGAIEARKESPSDDLLSRFM-----KKRDVDGNLFPSAVLQRIALNFVLAGR 305
+++ ++D ++ ++ + D SR++ ++R G AV+ G
Sbjct: 167 MKLCHGHLDASLSQKRRAALGDKFSRYLLAMIARERKEPGEGMIGAVVAEY-------GD 219
Query: 306 DTSSVALSWFFWLIMNHPCVEQKIV--DEISTVLKETRGSNVKKWMEEPLEFD--EADKL 361
D + L F CV+ + D IS ++ G V + P + D D+
Sbjct: 220 DATDEELRGF--------CVQVMLAGDDNISGMI----GLGVLAMLRHPEQIDAFRGDEQ 267
Query: 362 IYLKAALAETLRLYPSVP-EDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGED 420
+ A+ E +R Y +VP + +D+ G + G +V S+ + R
Sbjct: 268 -SAQRAVDELIR-YLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANR-------- 317
Query: 421 CLEFKPERWLSAEGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKS 468
+ L+ + DR + ++ VAF G CLG LA L++++
Sbjct: 318 ------DPALAPDVDRLDVTREPIPHVAFGHGVHHCLGAALARLELRT 359
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,461,367
Number of Sequences: 62578
Number of extensions: 650348
Number of successful extensions: 1887
Number of sequences better than 100.0: 167
Number of HSP's better than 100.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 1617
Number of HSP's gapped (non-prelim): 189
length of query: 513
length of database: 14,973,337
effective HSP length: 103
effective length of query: 410
effective length of database: 8,527,803
effective search space: 3496399230
effective search space used: 3496399230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)